1c4762a1bSJed Brown static char help[] = "Test file for the PCFactorSetShiftType()\n"; 2c4762a1bSJed Brown /* 3c4762a1bSJed Brown * Test file for the PCFactorSetShiftType() routine or -pc_factor_shift_type POSITIVE_DEFINITE option. 4c4762a1bSJed Brown * The test matrix is the example from Kershaw's paper [J.Comp.Phys 1978] 5c4762a1bSJed Brown * of a positive definite matrix for which ILU(0) will give a negative pivot. 6c4762a1bSJed Brown * This means that the CG method will break down; the Manteuffel shift 7c4762a1bSJed Brown * [Math. Comp. 1980] repairs this. 8c4762a1bSJed Brown * 9c4762a1bSJed Brown * Run the executable twice: 10c4762a1bSJed Brown * 1/ without options: the iterative method diverges because of an 11c4762a1bSJed Brown * indefinite preconditioner 12c4762a1bSJed Brown * 2/ with -pc_factor_shift_positive_definite option (or comment in the PCFactorSetShiftType() line below): 13c4762a1bSJed Brown * the method will now successfully converge. 14c4762a1bSJed Brown */ 15c4762a1bSJed Brown 16c4762a1bSJed Brown #include <petscksp.h> 17c4762a1bSJed Brown 18c4762a1bSJed Brown int main(int argc,char **argv) 19c4762a1bSJed Brown { 20c4762a1bSJed Brown KSP ksp; 21c4762a1bSJed Brown PC pc; 22c4762a1bSJed Brown Mat A,M; 23c4762a1bSJed Brown Vec X,B,D; 24c4762a1bSJed Brown MPI_Comm comm; 25c4762a1bSJed Brown PetscScalar v; 26c4762a1bSJed Brown KSPConvergedReason reason; 27c4762a1bSJed Brown PetscInt i,j,its; 28c4762a1bSJed Brown PetscErrorCode ierr; 29c4762a1bSJed Brown 30c4762a1bSJed Brown PetscFunctionBegin; 31c4762a1bSJed Brown ierr = PetscInitialize(&argc,&argv,0,help);if (ierr) return ierr; 32c4762a1bSJed Brown comm = MPI_COMM_SELF; 33c4762a1bSJed Brown 34c4762a1bSJed Brown /* 35c4762a1bSJed Brown * Construct the Kershaw matrix 36c4762a1bSJed Brown * and a suitable rhs / initial guess 37c4762a1bSJed Brown */ 38c4762a1bSJed Brown ierr = MatCreateSeqAIJ(comm,4,4,4,0,&A);CHKERRQ(ierr); 39c4762a1bSJed Brown ierr = VecCreateSeq(comm,4,&B);CHKERRQ(ierr); 40c4762a1bSJed Brown ierr = VecDuplicate(B,&X);CHKERRQ(ierr); 41c4762a1bSJed Brown for (i=0; i<4; i++) { 42c4762a1bSJed Brown v = 3; 43c4762a1bSJed Brown ierr = MatSetValues(A,1,&i,1,&i,&v,INSERT_VALUES);CHKERRQ(ierr); 44c4762a1bSJed Brown v = 1; 45c4762a1bSJed Brown ierr = VecSetValues(B,1,&i,&v,INSERT_VALUES);CHKERRQ(ierr); 46c4762a1bSJed Brown ierr = VecSetValues(X,1,&i,&v,INSERT_VALUES);CHKERRQ(ierr); 47c4762a1bSJed Brown } 48c4762a1bSJed Brown 49c4762a1bSJed Brown i =0; v=0; 50c4762a1bSJed Brown ierr = VecSetValues(X,1,&i,&v,INSERT_VALUES);CHKERRQ(ierr); 51c4762a1bSJed Brown 52c4762a1bSJed Brown for (i=0; i<3; i++) { 53c4762a1bSJed Brown v = -2; j=i+1; 54c4762a1bSJed Brown ierr = MatSetValues(A,1,&i,1,&j,&v,INSERT_VALUES);CHKERRQ(ierr); 55c4762a1bSJed Brown ierr = MatSetValues(A,1,&j,1,&i,&v,INSERT_VALUES);CHKERRQ(ierr); 56c4762a1bSJed Brown } 57c4762a1bSJed Brown i=0; j=3; v=2; 58c4762a1bSJed Brown 59c4762a1bSJed Brown ierr = MatSetValues(A,1,&i,1,&j,&v,INSERT_VALUES);CHKERRQ(ierr); 60c4762a1bSJed Brown ierr = MatSetValues(A,1,&j,1,&i,&v,INSERT_VALUES);CHKERRQ(ierr); 61c4762a1bSJed Brown ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 62c4762a1bSJed Brown ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 63c4762a1bSJed Brown ierr = VecAssemblyBegin(B);CHKERRQ(ierr); 64c4762a1bSJed Brown ierr = VecAssemblyEnd(B);CHKERRQ(ierr); 65c4762a1bSJed Brown ierr = PetscPrintf(PETSC_COMM_WORLD,"\nThe Kershaw matrix:\n\n");CHKERRQ(ierr); 66c4762a1bSJed Brown ierr = MatView(A,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr); 67c4762a1bSJed Brown 68c4762a1bSJed Brown /* 69c4762a1bSJed Brown * A Conjugate Gradient method 70c4762a1bSJed Brown * with ILU(0) preconditioning 71c4762a1bSJed Brown */ 72c4762a1bSJed Brown ierr = KSPCreate(comm,&ksp);CHKERRQ(ierr); 73c4762a1bSJed Brown ierr = KSPSetOperators(ksp,A,A);CHKERRQ(ierr); 74c4762a1bSJed Brown 75c4762a1bSJed Brown ierr = KSPSetType(ksp,KSPCG);CHKERRQ(ierr); 76c4762a1bSJed Brown ierr = KSPSetInitialGuessNonzero(ksp,PETSC_TRUE);CHKERRQ(ierr); 77c4762a1bSJed Brown 78c4762a1bSJed Brown /* 79c4762a1bSJed Brown * ILU preconditioner; 80c4762a1bSJed Brown * The iterative method will break down unless you comment in the SetShift 81c4762a1bSJed Brown * line below, or use the -pc_factor_shift_positive_definite option. 82c4762a1bSJed Brown * Run the code twice: once as given to see the negative pivot and the 83c4762a1bSJed Brown * divergence behaviour, then comment in the Shift line, or add the 84c4762a1bSJed Brown * command line option, and see that the pivots are all positive and 85c4762a1bSJed Brown * the method converges. 86c4762a1bSJed Brown */ 87c4762a1bSJed Brown ierr = KSPGetPC(ksp,&pc);CHKERRQ(ierr); 88c4762a1bSJed Brown ierr = PCSetType(pc,PCICC);CHKERRQ(ierr); 89c4762a1bSJed Brown /* ierr = PCFactorSetShiftType(prec,MAT_SHIFT_POSITIVE_DEFINITE);CHKERRQ(ierr); */ 90c4762a1bSJed Brown 91c4762a1bSJed Brown ierr = KSPSetFromOptions(ksp);CHKERRQ(ierr); 92c4762a1bSJed Brown ierr = KSPSetUp(ksp);CHKERRQ(ierr); 93c4762a1bSJed Brown 94c4762a1bSJed Brown /* 95c4762a1bSJed Brown * Now that the factorisation is done, show the pivots; 96c4762a1bSJed Brown * note that the last one is negative. This in itself is not an error, 97c4762a1bSJed Brown * but it will make the iterative method diverge. 98c4762a1bSJed Brown */ 99c4762a1bSJed Brown ierr = PCFactorGetMatrix(pc,&M);CHKERRQ(ierr); 100c4762a1bSJed Brown ierr = VecDuplicate(B,&D);CHKERRQ(ierr); 101c4762a1bSJed Brown ierr = MatGetDiagonal(M,D);CHKERRQ(ierr); 102c4762a1bSJed Brown ierr = PetscPrintf(PETSC_COMM_WORLD,"\nPivots:\n\n");CHKERRQ(ierr); 103c4762a1bSJed Brown ierr = VecView(D,0);CHKERRQ(ierr); 104c4762a1bSJed Brown 105c4762a1bSJed Brown /* 106c4762a1bSJed Brown * Solve the system; 107c4762a1bSJed Brown * without the shift this will diverge with 108c4762a1bSJed Brown * an indefinite preconditioner 109c4762a1bSJed Brown */ 110c4762a1bSJed Brown ierr = KSPSolve(ksp,B,X);CHKERRQ(ierr); 111c4762a1bSJed Brown ierr = KSPGetConvergedReason(ksp,&reason);CHKERRQ(ierr); 112c4762a1bSJed Brown if (reason==KSP_DIVERGED_INDEFINITE_PC) { 113c4762a1bSJed Brown ierr = PetscPrintf(PETSC_COMM_WORLD,"\nDivergence because of indefinite preconditioner;\n");CHKERRQ(ierr); 114c4762a1bSJed Brown ierr = PetscPrintf(PETSC_COMM_WORLD,"Run the executable again but with -pc_factor_shift_positive_definite option.\n");CHKERRQ(ierr); 115c4762a1bSJed Brown } else if (reason<0) { 116c4762a1bSJed Brown ierr = PetscPrintf(PETSC_COMM_WORLD,"\nOther kind of divergence: this should not happen.\n");CHKERRQ(ierr); 117c4762a1bSJed Brown } else { 118c4762a1bSJed Brown ierr = KSPGetIterationNumber(ksp,&its);CHKERRQ(ierr); 119c4762a1bSJed Brown ierr = PetscPrintf(PETSC_COMM_WORLD,"\nConvergence in %d iterations.\n",(int)its);CHKERRQ(ierr); 120c4762a1bSJed Brown } 121c4762a1bSJed Brown ierr = PetscPrintf(PETSC_COMM_WORLD,"\n");CHKERRQ(ierr); 122c4762a1bSJed Brown 123c4762a1bSJed Brown ierr = KSPDestroy(&ksp);CHKERRQ(ierr); 124c4762a1bSJed Brown ierr = MatDestroy(&A);CHKERRQ(ierr); 125c4762a1bSJed Brown ierr = VecDestroy(&B);CHKERRQ(ierr); 126c4762a1bSJed Brown ierr = VecDestroy(&X);CHKERRQ(ierr); 127c4762a1bSJed Brown ierr = VecDestroy(&D);CHKERRQ(ierr); 128c4762a1bSJed Brown ierr = PetscFinalize(); 129c4762a1bSJed Brown return ierr; 130c4762a1bSJed Brown } 131c4762a1bSJed Brown 132c4762a1bSJed Brown 133c4762a1bSJed Brown /*TEST 134c4762a1bSJed Brown 135c4762a1bSJed Brown test: 136*560a203cSprj- filter: sed -e "s/in 5 iterations/in 4 iterations/g" 137*560a203cSprj- 138c4762a1bSJed Brown 139c4762a1bSJed Brown TEST*/ 140