1 static char help[] = "Test file for the PCFactorSetShiftType()\n"; 2 /* 3 * Test file for the PCFactorSetShiftType() routine or -pc_factor_shift_type POSITIVE_DEFINITE option. 4 * The test matrix is the example from Kershaw's paper [J.Comp.Phys 1978] 5 * of a positive definite matrix for which ILU(0) will give a negative pivot. 6 * This means that the CG method will break down; the Manteuffel shift 7 * [Math. Comp. 1980] repairs this. 8 * 9 * Run the executable twice: 10 * 1/ without options: the iterative method diverges because of an 11 * indefinite preconditioner 12 * 2/ with -pc_factor_shift_positive_definite option (or comment in the PCFactorSetShiftType() line below): 13 * the method will now successfully converge. 14 */ 15 16 #include <petscksp.h> 17 18 int main(int argc,char **argv) 19 { 20 KSP ksp; 21 PC pc; 22 Mat A,M; 23 Vec X,B,D; 24 MPI_Comm comm; 25 PetscScalar v; 26 KSPConvergedReason reason; 27 PetscInt i,j,its; 28 PetscErrorCode ierr; 29 30 PetscFunctionBegin; 31 ierr = PetscInitialize(&argc,&argv,0,help);if (ierr) return ierr; 32 comm = MPI_COMM_SELF; 33 34 /* 35 * Construct the Kershaw matrix 36 * and a suitable rhs / initial guess 37 */ 38 CHKERRQ(MatCreateSeqAIJ(comm,4,4,4,0,&A)); 39 CHKERRQ(VecCreateSeq(comm,4,&B)); 40 CHKERRQ(VecDuplicate(B,&X)); 41 for (i=0; i<4; i++) { 42 v = 3; 43 CHKERRQ(MatSetValues(A,1,&i,1,&i,&v,INSERT_VALUES)); 44 v = 1; 45 CHKERRQ(VecSetValues(B,1,&i,&v,INSERT_VALUES)); 46 CHKERRQ(VecSetValues(X,1,&i,&v,INSERT_VALUES)); 47 } 48 49 i =0; v=0; 50 CHKERRQ(VecSetValues(X,1,&i,&v,INSERT_VALUES)); 51 52 for (i=0; i<3; i++) { 53 v = -2; j=i+1; 54 CHKERRQ(MatSetValues(A,1,&i,1,&j,&v,INSERT_VALUES)); 55 CHKERRQ(MatSetValues(A,1,&j,1,&i,&v,INSERT_VALUES)); 56 } 57 i=0; j=3; v=2; 58 59 CHKERRQ(MatSetValues(A,1,&i,1,&j,&v,INSERT_VALUES)); 60 CHKERRQ(MatSetValues(A,1,&j,1,&i,&v,INSERT_VALUES)); 61 CHKERRQ(MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY)); 62 CHKERRQ(MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY)); 63 CHKERRQ(VecAssemblyBegin(B)); 64 CHKERRQ(VecAssemblyEnd(B)); 65 CHKERRQ(PetscPrintf(PETSC_COMM_WORLD,"\nThe Kershaw matrix:\n\n")); 66 CHKERRQ(MatView(A,PETSC_VIEWER_STDOUT_WORLD)); 67 68 /* 69 * A Conjugate Gradient method 70 * with ILU(0) preconditioning 71 */ 72 CHKERRQ(KSPCreate(comm,&ksp)); 73 CHKERRQ(KSPSetOperators(ksp,A,A)); 74 75 CHKERRQ(KSPSetType(ksp,KSPCG)); 76 CHKERRQ(KSPSetInitialGuessNonzero(ksp,PETSC_TRUE)); 77 78 /* 79 * ILU preconditioner; 80 * The iterative method will break down unless you comment in the SetShift 81 * line below, or use the -pc_factor_shift_positive_definite option. 82 * Run the code twice: once as given to see the negative pivot and the 83 * divergence behaviour, then comment in the Shift line, or add the 84 * command line option, and see that the pivots are all positive and 85 * the method converges. 86 */ 87 CHKERRQ(KSPGetPC(ksp,&pc)); 88 CHKERRQ(PCSetType(pc,PCICC)); 89 /* CHKERRQ(PCFactorSetShiftType(prec,MAT_SHIFT_POSITIVE_DEFINITE)); */ 90 91 CHKERRQ(KSPSetFromOptions(ksp)); 92 CHKERRQ(KSPSetUp(ksp)); 93 94 /* 95 * Now that the factorisation is done, show the pivots; 96 * note that the last one is negative. This in itself is not an error, 97 * but it will make the iterative method diverge. 98 */ 99 CHKERRQ(PCFactorGetMatrix(pc,&M)); 100 CHKERRQ(VecDuplicate(B,&D)); 101 CHKERRQ(MatGetDiagonal(M,D)); 102 CHKERRQ(PetscPrintf(PETSC_COMM_WORLD,"\nPivots:\n\n")); 103 CHKERRQ(VecView(D,0)); 104 105 /* 106 * Solve the system; 107 * without the shift this will diverge with 108 * an indefinite preconditioner 109 */ 110 CHKERRQ(KSPSolve(ksp,B,X)); 111 CHKERRQ(KSPGetConvergedReason(ksp,&reason)); 112 if (reason==KSP_DIVERGED_INDEFINITE_PC) { 113 CHKERRQ(PetscPrintf(PETSC_COMM_WORLD,"\nDivergence because of indefinite preconditioner;\n")); 114 CHKERRQ(PetscPrintf(PETSC_COMM_WORLD,"Run the executable again but with -pc_factor_shift_positive_definite option.\n")); 115 } else if (reason<0) { 116 CHKERRQ(PetscPrintf(PETSC_COMM_WORLD,"\nOther kind of divergence: this should not happen.\n")); 117 } else { 118 CHKERRQ(KSPGetIterationNumber(ksp,&its)); 119 CHKERRQ(PetscPrintf(PETSC_COMM_WORLD,"\nConvergence in %d iterations.\n",(int)its)); 120 } 121 CHKERRQ(PetscPrintf(PETSC_COMM_WORLD,"\n")); 122 123 CHKERRQ(KSPDestroy(&ksp)); 124 CHKERRQ(MatDestroy(&A)); 125 CHKERRQ(VecDestroy(&B)); 126 CHKERRQ(VecDestroy(&X)); 127 CHKERRQ(VecDestroy(&D)); 128 ierr = PetscFinalize(); 129 return ierr; 130 } 131 132 /*TEST 133 134 test: 135 filter: sed -e "s/in 5 iterations/in 4 iterations/g" 136 137 TEST*/ 138