12327d61dSSatish Balay #include "petscconf.h" 22327d61dSSatish Balay PETSC_CUDA_EXTERN_C_BEGIN 39ae82921SPaul Mullowney #include <../src/mat/impls/aij/mpi/mpiaij.h> /*I "petscmat.h" I*/ 42327d61dSSatish Balay PETSC_CUDA_EXTERN_C_END 5bbf3fe20SPaul Mullowney #include "mpicusparsematimpl.h" 69ae82921SPaul Mullowney 79ae82921SPaul Mullowney #undef __FUNCT__ 89ae82921SPaul Mullowney #define __FUNCT__ "MatMPIAIJSetPreallocation_MPIAIJCUSPARSE" 99ae82921SPaul Mullowney PetscErrorCode MatMPIAIJSetPreallocation_MPIAIJCUSPARSE(Mat B,PetscInt d_nz,const PetscInt d_nnz[],PetscInt o_nz,const PetscInt o_nnz[]) 109ae82921SPaul Mullowney { 11bbf3fe20SPaul Mullowney Mat_MPIAIJ *b = (Mat_MPIAIJ*)B->data; 12bbf3fe20SPaul Mullowney Mat_MPIAIJCUSPARSE * cusparseStruct = (Mat_MPIAIJCUSPARSE*)b->spptr; 139ae82921SPaul Mullowney PetscErrorCode ierr; 149ae82921SPaul Mullowney PetscInt i; 159ae82921SPaul Mullowney 169ae82921SPaul Mullowney PetscFunctionBegin; 179ae82921SPaul Mullowney if (d_nz == PETSC_DEFAULT || d_nz == PETSC_DECIDE) d_nz = 5; 189ae82921SPaul Mullowney if (o_nz == PETSC_DEFAULT || o_nz == PETSC_DECIDE) o_nz = 2; 199ae82921SPaul Mullowney if (d_nz < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"d_nz cannot be less than 0: value %D",d_nz); 209ae82921SPaul Mullowney if (o_nz < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"o_nz cannot be less than 0: value %D",o_nz); 219ae82921SPaul Mullowney 229ae82921SPaul Mullowney ierr = PetscLayoutSetBlockSize(B->rmap,1);CHKERRQ(ierr); 239ae82921SPaul Mullowney ierr = PetscLayoutSetBlockSize(B->cmap,1);CHKERRQ(ierr); 249ae82921SPaul Mullowney ierr = PetscLayoutSetUp(B->rmap);CHKERRQ(ierr); 259ae82921SPaul Mullowney ierr = PetscLayoutSetUp(B->cmap);CHKERRQ(ierr); 269ae82921SPaul Mullowney if (d_nnz) { 279ae82921SPaul Mullowney for (i=0; i<B->rmap->n; i++) { 289ae82921SPaul Mullowney if (d_nnz[i] < 0) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"d_nnz cannot be less than 0: local row %D value %D",i,d_nnz[i]); 299ae82921SPaul Mullowney } 309ae82921SPaul Mullowney } 319ae82921SPaul Mullowney if (o_nnz) { 329ae82921SPaul Mullowney for (i=0; i<B->rmap->n; i++) { 339ae82921SPaul Mullowney if (o_nnz[i] < 0) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"o_nnz cannot be less than 0: local row %D value %D",i,o_nnz[i]); 349ae82921SPaul Mullowney } 359ae82921SPaul Mullowney } 369ae82921SPaul Mullowney if (!B->preallocated) { 37bbf3fe20SPaul Mullowney /* Explicitly create 2 MATSEQAIJCUSPARSE matrices. */ 389ae82921SPaul Mullowney ierr = MatCreate(PETSC_COMM_SELF,&b->A);CHKERRQ(ierr); 399ae82921SPaul Mullowney ierr = MatSetSizes(b->A,B->rmap->n,B->cmap->n,B->rmap->n,B->cmap->n);CHKERRQ(ierr); 409ae82921SPaul Mullowney ierr = MatSetType(b->A,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 419ae82921SPaul Mullowney ierr = PetscLogObjectParent(B,b->A);CHKERRQ(ierr); 429ae82921SPaul Mullowney ierr = MatCreate(PETSC_COMM_SELF,&b->B);CHKERRQ(ierr); 439ae82921SPaul Mullowney ierr = MatSetSizes(b->B,B->rmap->n,B->cmap->N,B->rmap->n,B->cmap->N);CHKERRQ(ierr); 449ae82921SPaul Mullowney ierr = MatSetType(b->B,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 459ae82921SPaul Mullowney ierr = PetscLogObjectParent(B,b->B);CHKERRQ(ierr); 469ae82921SPaul Mullowney } 479ae82921SPaul Mullowney ierr = MatSeqAIJSetPreallocation(b->A,d_nz,d_nnz);CHKERRQ(ierr); 489ae82921SPaul Mullowney ierr = MatSeqAIJSetPreallocation(b->B,o_nz,o_nnz);CHKERRQ(ierr); 49e057df02SPaul Mullowney ierr=MatCUSPARSESetFormat(b->A,MAT_CUSPARSE_MULT,cusparseStruct->diagGPUMatFormat);CHKERRQ(ierr); 50e057df02SPaul Mullowney ierr=MatCUSPARSESetFormat(b->B,MAT_CUSPARSE_MULT,cusparseStruct->offdiagGPUMatFormat);CHKERRQ(ierr); 519ae82921SPaul Mullowney B->preallocated = PETSC_TRUE; 529ae82921SPaul Mullowney PetscFunctionReturn(0); 539ae82921SPaul Mullowney } 54e057df02SPaul Mullowney 559ae82921SPaul Mullowney #undef __FUNCT__ 569ae82921SPaul Mullowney #define __FUNCT__ "MatGetVecs_MPIAIJCUSPARSE" 579ae82921SPaul Mullowney PetscErrorCode MatGetVecs_MPIAIJCUSPARSE(Mat mat,Vec *right,Vec *left) 589ae82921SPaul Mullowney { 599ae82921SPaul Mullowney PetscErrorCode ierr; 609ae82921SPaul Mullowney 619ae82921SPaul Mullowney PetscFunctionBegin; 629ae82921SPaul Mullowney if (right) { 639ae82921SPaul Mullowney ierr = VecCreate(((PetscObject)mat)->comm,right);CHKERRQ(ierr); 649ae82921SPaul Mullowney ierr = VecSetSizes(*right,mat->cmap->n,PETSC_DETERMINE);CHKERRQ(ierr); 659ae82921SPaul Mullowney ierr = VecSetBlockSize(*right,mat->rmap->bs);CHKERRQ(ierr); 669ae82921SPaul Mullowney ierr = VecSetType(*right,VECCUSP);CHKERRQ(ierr); 679ae82921SPaul Mullowney ierr = PetscLayoutReference(mat->cmap,&(*right)->map);CHKERRQ(ierr); 689ae82921SPaul Mullowney } 699ae82921SPaul Mullowney if (left) { 709ae82921SPaul Mullowney ierr = VecCreate(((PetscObject)mat)->comm,left);CHKERRQ(ierr); 719ae82921SPaul Mullowney ierr = VecSetSizes(*left,mat->rmap->n,PETSC_DETERMINE);CHKERRQ(ierr); 729ae82921SPaul Mullowney ierr = VecSetBlockSize(*left,mat->rmap->bs);CHKERRQ(ierr); 739ae82921SPaul Mullowney ierr = VecSetType(*left,VECCUSP);CHKERRQ(ierr); 749ae82921SPaul Mullowney ierr = PetscLayoutReference(mat->rmap,&(*left)->map);CHKERRQ(ierr); 759ae82921SPaul Mullowney } 769ae82921SPaul Mullowney PetscFunctionReturn(0); 779ae82921SPaul Mullowney } 789ae82921SPaul Mullowney 799ae82921SPaul Mullowney 809ae82921SPaul Mullowney #undef __FUNCT__ 819ae82921SPaul Mullowney #define __FUNCT__ "MatMult_MPIAIJCUSPARSE" 829ae82921SPaul Mullowney PetscErrorCode MatMult_MPIAIJCUSPARSE(Mat A,Vec xx,Vec yy) 839ae82921SPaul Mullowney { 84e057df02SPaul Mullowney /* This multiplication sequence is different sequence 85e057df02SPaul Mullowney than the CPU version. In particular, the diagonal block 86e057df02SPaul Mullowney multiplication kernel is launched in one stream. Then, 87e057df02SPaul Mullowney in a separate stream, the data transfers from DeviceToHost 88e057df02SPaul Mullowney (with MPI messaging in between), then HostToDevice are 89e057df02SPaul Mullowney launched. Once the data transfer stream is synchronized, 90e057df02SPaul Mullowney to ensure messaging is complete, the MatMultAdd kernel 91e057df02SPaul Mullowney is launched in the original (MatMult) stream to protect 92e057df02SPaul Mullowney against race conditions. 93e057df02SPaul Mullowney 94e057df02SPaul Mullowney This sequence should only be called for GPU computation. */ 959ae82921SPaul Mullowney Mat_MPIAIJ *a = (Mat_MPIAIJ*)A->data; 969ae82921SPaul Mullowney PetscErrorCode ierr; 979ae82921SPaul Mullowney PetscInt nt; 989ae82921SPaul Mullowney 999ae82921SPaul Mullowney PetscFunctionBegin; 1009ae82921SPaul Mullowney ierr = VecGetLocalSize(xx,&nt);CHKERRQ(ierr); 1019ae82921SPaul Mullowney if (nt != A->cmap->n) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Incompatible partition of A (%D) and xx (%D)",A->cmap->n,nt); 1029ae82921SPaul Mullowney ierr = VecScatterInitializeForGPU(a->Mvctx,xx,SCATTER_FORWARD);CHKERRQ(ierr); 1039ae82921SPaul Mullowney ierr = (*a->A->ops->mult)(a->A,xx,yy);CHKERRQ(ierr); 1049ae82921SPaul Mullowney ierr = VecScatterBegin(a->Mvctx,xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1059ae82921SPaul Mullowney ierr = VecScatterEnd(a->Mvctx,xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1069ae82921SPaul Mullowney ierr = (*a->B->ops->multadd)(a->B,a->lvec,yy,yy);CHKERRQ(ierr); 1079ae82921SPaul Mullowney ierr = VecScatterFinalizeForGPU(a->Mvctx);CHKERRQ(ierr); 1089ae82921SPaul Mullowney PetscFunctionReturn(0); 1099ae82921SPaul Mullowney } 110ca45077fSPaul Mullowney 111ca45077fSPaul Mullowney #undef __FUNCT__ 112ca45077fSPaul Mullowney #define __FUNCT__ "MatMult_MPIAIJCUSPARSE" 113ca45077fSPaul Mullowney PetscErrorCode MatMultTranspose_MPIAIJCUSPARSE(Mat A,Vec xx,Vec yy) 114ca45077fSPaul Mullowney { 115e057df02SPaul Mullowney /* This multiplication sequence is different sequence 116e057df02SPaul Mullowney than the CPU version. In particular, the diagonal block 117e057df02SPaul Mullowney multiplication kernel is launched in one stream. Then, 118e057df02SPaul Mullowney in a separate stream, the data transfers from DeviceToHost 119e057df02SPaul Mullowney (with MPI messaging in between), then HostToDevice are 120e057df02SPaul Mullowney launched. Once the data transfer stream is synchronized, 121e057df02SPaul Mullowney to ensure messaging is complete, the MatMultAdd kernel 122e057df02SPaul Mullowney is launched in the original (MatMult) stream to protect 123e057df02SPaul Mullowney against race conditions. 124e057df02SPaul Mullowney 125e057df02SPaul Mullowney This sequence should only be called for GPU computation. */ 126ca45077fSPaul Mullowney Mat_MPIAIJ *a = (Mat_MPIAIJ*)A->data; 127ca45077fSPaul Mullowney PetscErrorCode ierr; 128ca45077fSPaul Mullowney PetscInt nt; 129ca45077fSPaul Mullowney 130ca45077fSPaul Mullowney PetscFunctionBegin; 131ca45077fSPaul Mullowney ierr = VecGetLocalSize(xx,&nt);CHKERRQ(ierr); 132ca45077fSPaul Mullowney if (nt != A->cmap->n) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Incompatible partition of A (%D) and xx (%D)",A->cmap->n,nt); 133ca45077fSPaul Mullowney ierr = VecScatterInitializeForGPU(a->Mvctx,xx,SCATTER_FORWARD);CHKERRQ(ierr); 134ca45077fSPaul Mullowney ierr = (*a->A->ops->multtranspose)(a->A,xx,yy);CHKERRQ(ierr); 135ca45077fSPaul Mullowney ierr = VecScatterBegin(a->Mvctx,xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 136ca45077fSPaul Mullowney ierr = VecScatterEnd(a->Mvctx,xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 137ca45077fSPaul Mullowney ierr = (*a->B->ops->multtransposeadd)(a->B,a->lvec,yy,yy);CHKERRQ(ierr); 138ca45077fSPaul Mullowney ierr = VecScatterFinalizeForGPU(a->Mvctx);CHKERRQ(ierr); 139ca45077fSPaul Mullowney PetscFunctionReturn(0); 140ca45077fSPaul Mullowney } 1419ae82921SPaul Mullowney 142ca45077fSPaul Mullowney EXTERN_C_BEGIN 143ca45077fSPaul Mullowney #undef __FUNCT__ 144e057df02SPaul Mullowney #define __FUNCT__ "MatCUSPARSESetFormat_MPIAIJCUSPARSE" 145e057df02SPaul Mullowney PetscErrorCode MatCUSPARSESetFormat_MPIAIJCUSPARSE(Mat A,MatCUSPARSEFormatOperation op,MatCUSPARSEStorageFormat format) 146ca45077fSPaul Mullowney { 147ca45077fSPaul Mullowney Mat_MPIAIJ *a = (Mat_MPIAIJ*)A->data; 148bbf3fe20SPaul Mullowney Mat_MPIAIJCUSPARSE * cusparseStruct = (Mat_MPIAIJCUSPARSE*)a->spptr; 149e057df02SPaul Mullowney 150ca45077fSPaul Mullowney PetscFunctionBegin; 151e057df02SPaul Mullowney switch (op) { 152e057df02SPaul Mullowney case MAT_CUSPARSE_MULT_DIAG: 153e057df02SPaul Mullowney cusparseStruct->diagGPUMatFormat = format; 154045c96e1SPaul Mullowney break; 155e057df02SPaul Mullowney case MAT_CUSPARSE_MULT_OFFDIAG: 156e057df02SPaul Mullowney cusparseStruct->offdiagGPUMatFormat = format; 157045c96e1SPaul Mullowney break; 158e057df02SPaul Mullowney case MAT_CUSPARSE_ALL: 159e057df02SPaul Mullowney cusparseStruct->diagGPUMatFormat = format; 160e057df02SPaul Mullowney cusparseStruct->offdiagGPUMatFormat = format; 161045c96e1SPaul Mullowney break; 162e057df02SPaul Mullowney default: 163e057df02SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"unsupported operation %d for MatCUSPARSEFormatOperation. Only MAT_CUSPARSE_MULT_DIAG, MAT_CUSPARSE_MULT_DIAG, and MAT_CUSPARSE_MULT_ALL are currently supported.",op); 164045c96e1SPaul Mullowney } 165ca45077fSPaul Mullowney PetscFunctionReturn(0); 166ca45077fSPaul Mullowney } 167ca45077fSPaul Mullowney EXTERN_C_END 168ca45077fSPaul Mullowney 169e057df02SPaul Mullowney 170e057df02SPaul Mullowney #undef __FUNCT__ 171e057df02SPaul Mullowney #define __FUNCT__ "MatSetFromOptions_MPIAIJCUSPARSE" 172e057df02SPaul Mullowney PetscErrorCode MatSetFromOptions_MPIAIJCUSPARSE(Mat A) 173e057df02SPaul Mullowney { 174e057df02SPaul Mullowney MatCUSPARSEStorageFormat format; 175e057df02SPaul Mullowney PetscErrorCode ierr; 176e057df02SPaul Mullowney PetscBool flg; 1775fd66863SKarl Rupp 178e057df02SPaul Mullowney PetscFunctionBegin; 179e057df02SPaul Mullowney ierr = PetscOptionsHead("MPIAIJCUSPARSE options");CHKERRQ(ierr); 180e057df02SPaul Mullowney ierr = PetscObjectOptionsBegin((PetscObject)A); 181e057df02SPaul Mullowney if (A->factortype==MAT_FACTOR_NONE) { 182e057df02SPaul Mullowney ierr = PetscOptionsEnum("-mat_cusparse_mult_diag_storage_format","sets storage format of the diagonal blocks of (mpi)aijcusparse gpu matrices for SpMV", 1837083f85cSSatish Balay "MatCUSPARSESetFormat",MatCUSPARSEStorageFormats,(PetscEnum)MAT_CUSPARSE_CSR,(PetscEnum*)&format,&flg);CHKERRQ(ierr); 184e057df02SPaul Mullowney if (flg) { 185e057df02SPaul Mullowney ierr = MatCUSPARSESetFormat(A,MAT_CUSPARSE_MULT_DIAG,format);CHKERRQ(ierr); 186e057df02SPaul Mullowney } 187e057df02SPaul Mullowney ierr = PetscOptionsEnum("-mat_cusparse_mult_offdiag_storage_format","sets storage format of the off-diagonal blocks (mpi)aijcusparse gpu matrices for SpMV", 1887083f85cSSatish Balay "MatCUSPARSESetFormat",MatCUSPARSEStorageFormats,(PetscEnum)MAT_CUSPARSE_CSR,(PetscEnum*)&format,&flg);CHKERRQ(ierr); 189e057df02SPaul Mullowney if (flg) { 190e057df02SPaul Mullowney ierr = MatCUSPARSESetFormat(A,MAT_CUSPARSE_MULT_OFFDIAG,format);CHKERRQ(ierr); 191e057df02SPaul Mullowney } 192e057df02SPaul Mullowney ierr = PetscOptionsEnum("-mat_cusparse_storage_format","sets storage format of the diagonal and off-diagonal blocks (mpi)aijcusparse gpu matrices for SpMV", 1937083f85cSSatish Balay "MatCUSPARSESetFormat",MatCUSPARSEStorageFormats,(PetscEnum)MAT_CUSPARSE_CSR,(PetscEnum*)&format,&flg);CHKERRQ(ierr); 194e057df02SPaul Mullowney if (flg) { 195e057df02SPaul Mullowney ierr = MatCUSPARSESetFormat(A,MAT_CUSPARSE_ALL,format);CHKERRQ(ierr); 196e057df02SPaul Mullowney } 197e057df02SPaul Mullowney } 198e057df02SPaul Mullowney ierr = PetscOptionsEnd();CHKERRQ(ierr); 199e057df02SPaul Mullowney PetscFunctionReturn(0); 200e057df02SPaul Mullowney } 201e057df02SPaul Mullowney 202bbf3fe20SPaul Mullowney #undef __FUNCT__ 203bbf3fe20SPaul Mullowney #define __FUNCT__ "MatDestroy_MPIAIJCUSPARSE" 204bbf3fe20SPaul Mullowney PetscErrorCode MatDestroy_MPIAIJCUSPARSE(Mat A) 205bbf3fe20SPaul Mullowney { 206bbf3fe20SPaul Mullowney PetscErrorCode ierr; 207bbf3fe20SPaul Mullowney Mat_MPIAIJ *a = (Mat_MPIAIJ*)A->data; 208bbf3fe20SPaul Mullowney Mat_MPIAIJCUSPARSE * cusparseStruct = (Mat_MPIAIJCUSPARSE*)a->spptr; 209bbf3fe20SPaul Mullowney 210bbf3fe20SPaul Mullowney PetscFunctionBegin; 211bbf3fe20SPaul Mullowney try { 212bbf3fe20SPaul Mullowney delete cusparseStruct; 213bbf3fe20SPaul Mullowney } catch(char* ex) { 214bbf3fe20SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Mat_MPIAIJCUSPARSE error: %s", ex); 215bbf3fe20SPaul Mullowney } 216bbf3fe20SPaul Mullowney cusparseStruct = 0; 217bbf3fe20SPaul Mullowney ierr = MatDestroy_MPIAIJ(A);CHKERRQ(ierr); 218bbf3fe20SPaul Mullowney PetscFunctionReturn(0); 219bbf3fe20SPaul Mullowney } 220ca45077fSPaul Mullowney 2219ae82921SPaul Mullowney EXTERN_C_BEGIN 2229ae82921SPaul Mullowney #undef __FUNCT__ 2239ae82921SPaul Mullowney #define __FUNCT__ "MatCreate_MPIAIJCUSPARSE" 224bbf3fe20SPaul Mullowney PetscErrorCode MatCreate_MPIAIJCUSPARSE(Mat A) 2259ae82921SPaul Mullowney { 2269ae82921SPaul Mullowney PetscErrorCode ierr; 227bbf3fe20SPaul Mullowney Mat_MPIAIJ *a; 228bbf3fe20SPaul Mullowney Mat_MPIAIJCUSPARSE * cusparseStruct; 2299ae82921SPaul Mullowney 2309ae82921SPaul Mullowney PetscFunctionBegin; 231bbf3fe20SPaul Mullowney ierr = MatCreate_MPIAIJ(A);CHKERRQ(ierr); 232bbf3fe20SPaul Mullowney ierr = PetscObjectComposeFunctionDynamic((PetscObject)A,"MatMPIAIJSetPreallocation_C", 2339ae82921SPaul Mullowney "MatMPIAIJSetPreallocation_MPIAIJCUSPARSE", 2349ae82921SPaul Mullowney MatMPIAIJSetPreallocation_MPIAIJCUSPARSE);CHKERRQ(ierr); 235bbf3fe20SPaul Mullowney a = (Mat_MPIAIJ*)A->data; 236bbf3fe20SPaul Mullowney a->spptr = new Mat_MPIAIJCUSPARSE; 237bbf3fe20SPaul Mullowney cusparseStruct = (Mat_MPIAIJCUSPARSE*)a->spptr; 238e057df02SPaul Mullowney cusparseStruct->diagGPUMatFormat = MAT_CUSPARSE_CSR; 239e057df02SPaul Mullowney cusparseStruct->offdiagGPUMatFormat = MAT_CUSPARSE_CSR; 240bbf3fe20SPaul Mullowney A->ops->getvecs = MatGetVecs_MPIAIJCUSPARSE; 241bbf3fe20SPaul Mullowney A->ops->mult = MatMult_MPIAIJCUSPARSE; 242bbf3fe20SPaul Mullowney A->ops->multtranspose = MatMultTranspose_MPIAIJCUSPARSE; 243bbf3fe20SPaul Mullowney A->ops->setfromoptions = MatSetFromOptions_MPIAIJCUSPARSE; 244bbf3fe20SPaul Mullowney A->ops->destroy = MatDestroy_MPIAIJCUSPARSE; 245bbf3fe20SPaul Mullowney ierr = PetscObjectChangeTypeName((PetscObject)A,MATMPIAIJCUSPARSE);CHKERRQ(ierr); 246e057df02SPaul Mullowney ierr = PetscObjectComposeFunctionDynamic((PetscObject)A,"MatCUSPARSESetFormat_C", "MatCUSPARSESetFormat_MPIAIJCUSPARSE", MatCUSPARSESetFormat_MPIAIJCUSPARSE);CHKERRQ(ierr); 2479ae82921SPaul Mullowney PetscFunctionReturn(0); 2489ae82921SPaul Mullowney } 2499ae82921SPaul Mullowney EXTERN_C_END 2509ae82921SPaul Mullowney 2513f9c0db1SPaul Mullowney /*@ 2523f9c0db1SPaul Mullowney MatCreateAIJCUSPARSE - Creates a sparse matrix in AIJ (compressed row) format 253e057df02SPaul Mullowney (the default parallel PETSc format). This matrix will ultimately pushed down 2543f9c0db1SPaul Mullowney to NVidia GPUs and use the CUSPARSE library for calculations. For good matrix 255e057df02SPaul Mullowney assembly performance the user should preallocate the matrix storage by setting 256e057df02SPaul Mullowney the parameter nz (or the array nnz). By setting these parameters accurately, 257e057df02SPaul Mullowney performance during matrix assembly can be increased by more than a factor of 50. 258e057df02SPaul Mullowney This type is only available when using the 'txpetscgpu' package. Use --download-txpetscgpu 259e057df02SPaul Mullowney to build/install PETSc to use different CUSPARSE base matrix types. 2609ae82921SPaul Mullowney 261e057df02SPaul Mullowney Collective on MPI_Comm 262e057df02SPaul Mullowney 263e057df02SPaul Mullowney Input Parameters: 264e057df02SPaul Mullowney + comm - MPI communicator, set to PETSC_COMM_SELF 265e057df02SPaul Mullowney . m - number of rows 266e057df02SPaul Mullowney . n - number of columns 267e057df02SPaul Mullowney . nz - number of nonzeros per row (same for all rows) 268e057df02SPaul Mullowney - nnz - array containing the number of nonzeros in the various rows 269e057df02SPaul Mullowney (possibly different for each row) or PETSC_NULL 270e057df02SPaul Mullowney 271e057df02SPaul Mullowney Output Parameter: 272e057df02SPaul Mullowney . A - the matrix 273e057df02SPaul Mullowney 274e057df02SPaul Mullowney It is recommended that one use the MatCreate(), MatSetType() and/or MatSetFromOptions(), 275e057df02SPaul Mullowney MatXXXXSetPreallocation() paradigm instead of this routine directly. 276e057df02SPaul Mullowney [MatXXXXSetPreallocation() is, for example, MatSeqAIJSetPreallocation] 277e057df02SPaul Mullowney 278e057df02SPaul Mullowney Notes: 279e057df02SPaul Mullowney If nnz is given then nz is ignored 280e057df02SPaul Mullowney 281e057df02SPaul Mullowney The AIJ format (also called the Yale sparse matrix format or 282e057df02SPaul Mullowney compressed row storage), is fully compatible with standard Fortran 77 283e057df02SPaul Mullowney storage. That is, the stored row and column indices can begin at 284e057df02SPaul Mullowney either one (as in Fortran) or zero. See the users' manual for details. 285e057df02SPaul Mullowney 286e057df02SPaul Mullowney Specify the preallocated storage with either nz or nnz (not both). 287e057df02SPaul Mullowney Set nz=PETSC_DEFAULT and nnz=PETSC_NULL for PETSc to control dynamic memory 288e057df02SPaul Mullowney allocation. For large problems you MUST preallocate memory or you 289e057df02SPaul Mullowney will get TERRIBLE performance, see the users' manual chapter on matrices. 290e057df02SPaul Mullowney 291e057df02SPaul Mullowney By default, this format uses inodes (identical nodes) when possible, to 292e057df02SPaul Mullowney improve numerical efficiency of matrix-vector products and solves. We 293e057df02SPaul Mullowney search for consecutive rows with the same nonzero structure, thereby 294e057df02SPaul Mullowney reusing matrix information to achieve increased efficiency. 295e057df02SPaul Mullowney 296e057df02SPaul Mullowney Level: intermediate 297e057df02SPaul Mullowney 298e057df02SPaul Mullowney .seealso: MatCreate(), MatCreateAIJ(), MatSetValues(), MatSeqAIJSetColumnIndices(), MatCreateSeqAIJWithArrays(), MatCreateAIJ(), MATMPIAIJCUSPARSE, MATAIJCUSPARSE 299e057df02SPaul Mullowney @*/ 3009ae82921SPaul Mullowney #undef __FUNCT__ 3019ae82921SPaul Mullowney #define __FUNCT__ "MatCreateAIJCUSPARSE" 3029ae82921SPaul Mullowney PetscErrorCode MatCreateAIJCUSPARSE(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscInt d_nz,const PetscInt d_nnz[],PetscInt o_nz,const PetscInt o_nnz[],Mat *A) 3039ae82921SPaul Mullowney { 3049ae82921SPaul Mullowney PetscErrorCode ierr; 3059ae82921SPaul Mullowney PetscMPIInt size; 3069ae82921SPaul Mullowney 3079ae82921SPaul Mullowney PetscFunctionBegin; 3089ae82921SPaul Mullowney ierr = MatCreate(comm,A);CHKERRQ(ierr); 3099ae82921SPaul Mullowney ierr = MatSetSizes(*A,m,n,M,N);CHKERRQ(ierr); 3109ae82921SPaul Mullowney ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr); 3119ae82921SPaul Mullowney if (size > 1) { 3129ae82921SPaul Mullowney ierr = MatSetType(*A,MATMPIAIJCUSPARSE);CHKERRQ(ierr); 3139ae82921SPaul Mullowney ierr = MatMPIAIJSetPreallocation(*A,d_nz,d_nnz,o_nz,o_nnz);CHKERRQ(ierr); 3149ae82921SPaul Mullowney } else { 3159ae82921SPaul Mullowney ierr = MatSetType(*A,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 3169ae82921SPaul Mullowney ierr = MatSeqAIJSetPreallocation(*A,d_nz,d_nnz);CHKERRQ(ierr); 3179ae82921SPaul Mullowney } 3189ae82921SPaul Mullowney PetscFunctionReturn(0); 3199ae82921SPaul Mullowney } 3209ae82921SPaul Mullowney 3213f9c0db1SPaul Mullowney /*M 322e057df02SPaul Mullowney MATAIJCUSPARSE - MATMPIAIJCUSPARSE = "aijcusparse" = "mpiaijcusparse" - A matrix type to be used for sparse matrices. 323e057df02SPaul Mullowney 324e057df02SPaul Mullowney A matrix type type whose data resides on Nvidia GPUs. These matrices can be in CSR format. 325*8468deeeSKarl Rupp All matrix calculations are performed using the Nvidia CUSPARSE library. Use of the 326e057df02SPaul Mullowney CUSPARSE library REQUIRES the 'txpetscgpu' package. ELL and HYB formats are also available 327e057df02SPaul Mullowney in the txpetscgpu package. Use --download-txpetscgpu to build/install PETSc to use different 328e057df02SPaul Mullowney GPU storage formats with CUSPARSE matrix types. 3299ae82921SPaul Mullowney 3309ae82921SPaul Mullowney This matrix type is identical to MATSEQAIJCUSPARSE when constructed with a single process communicator, 3319ae82921SPaul Mullowney and MATMPIAIJCUSPARSE otherwise. As a result, for single process communicators, 3329ae82921SPaul Mullowney MatSeqAIJSetPreallocation is supported, and similarly MatMPIAIJSetPreallocation is supported 3339ae82921SPaul Mullowney for communicators controlling multiple processes. It is recommended that you call both of 3349ae82921SPaul Mullowney the above preallocation routines for simplicity. 3359ae82921SPaul Mullowney 3369ae82921SPaul Mullowney Options Database Keys: 337e057df02SPaul Mullowney + -mat_type mpiaijcusparse - sets the matrix type to "mpiaijcusparse" during a call to MatSetFromOptions() 338*8468deeeSKarl Rupp . -mat_cusparse_storage_format csr - sets the storage format of diagonal and off-diagonal matrices during a call to MatSetFromOptions(). Other options include ell (ellpack) or hyb (hybrid). 339*8468deeeSKarl Rupp . -mat_cusparse_mult_diag_storage_format csr - sets the storage format of diagonal matrix during a call to MatSetFromOptions(). Other options include ell (ellpack) or hyb (hybrid). 340*8468deeeSKarl Rupp - -mat_cusparse_mult_offdiag_storage_format csr - sets the storage format of off-diagonal matrix during a call to MatSetFromOptions(). Other options include ell (ellpack) or hyb (hybrid). 3419ae82921SPaul Mullowney 3429ae82921SPaul Mullowney Level: beginner 3439ae82921SPaul Mullowney 344*8468deeeSKarl Rupp .seealso: MatCreateAIJCUSPARSE(), MATSEQAIJCUSPARSE, MatCreateSeqAIJCUSPARSE(), MatCUSPARSESetFormat(), MatCUSPARSEStorageFormat, MatCUSPARSEFormatOperation 345*8468deeeSKarl Rupp M 3469ae82921SPaul Mullowney M*/ 347