19ae82921SPaul Mullowney /* 29ae82921SPaul Mullowney Defines the basic matrix operations for the AIJ (compressed row) 3fd7c363cSSatish Balay matrix storage format using the CUSPARSE library, 49ae82921SPaul Mullowney */ 5dced61a5SBarry Smith #define PETSC_SKIP_SPINLOCK 699acd6aaSStefano Zampini #define PETSC_SKIP_IMMINTRIN_H_CUDAWORKAROUND 1 79ae82921SPaul Mullowney 83d13b8fdSMatthew G. Knepley #include <petscconf.h> 93d13b8fdSMatthew G. Knepley #include <../src/mat/impls/aij/seq/aij.h> /*I "petscmat.h" I*/ 10087f3262SPaul Mullowney #include <../src/mat/impls/sbaij/seq/sbaij.h> 113d13b8fdSMatthew G. Knepley #include <../src/vec/vec/impls/dvecimpl.h> 12af0996ceSBarry Smith #include <petsc/private/vecimpl.h> 139ae82921SPaul Mullowney #undef VecType 143d13b8fdSMatthew G. Knepley #include <../src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h> 15a0e72f99SJunchao Zhang #include <thrust/async/for_each.h> 16e8d2b73aSMark Adams 17e057df02SPaul Mullowney const char *const MatCUSPARSEStorageFormats[] = {"CSR","ELL","HYB","MatCUSPARSEStorageFormat","MAT_CUSPARSE_",0}; 18afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 19afb2bd1cSJunchao Zhang /* The following are copied from cusparse.h in CUDA-11.0. In MatCUSPARSESpMVAlgorithms[] etc, we copy them in 20afb2bd1cSJunchao Zhang 0-based integer value order, since we want to use PetscOptionsEnum() to parse user command line options for them. 21afb2bd1cSJunchao Zhang 22afb2bd1cSJunchao Zhang typedef enum { 23afb2bd1cSJunchao Zhang CUSPARSE_MV_ALG_DEFAULT = 0, 24afb2bd1cSJunchao Zhang CUSPARSE_COOMV_ALG = 1, 25afb2bd1cSJunchao Zhang CUSPARSE_CSRMV_ALG1 = 2, 26afb2bd1cSJunchao Zhang CUSPARSE_CSRMV_ALG2 = 3 27afb2bd1cSJunchao Zhang } cusparseSpMVAlg_t; 28afb2bd1cSJunchao Zhang 29afb2bd1cSJunchao Zhang typedef enum { 30afb2bd1cSJunchao Zhang CUSPARSE_MM_ALG_DEFAULT CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_ALG_DEFAULT) = 0, 31afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG1 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG1) = 1, 32afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG2 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG2) = 2, 33afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG3 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG3) = 3, 34afb2bd1cSJunchao Zhang CUSPARSE_CSRMM_ALG1 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_CSR_ALG1) = 4, 35afb2bd1cSJunchao Zhang CUSPARSE_SPMM_ALG_DEFAULT = 0, 36afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG1 = 1, 37afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG2 = 2, 38afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG3 = 3, 39afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG4 = 5, 40afb2bd1cSJunchao Zhang CUSPARSE_SPMM_CSR_ALG1 = 4, 41afb2bd1cSJunchao Zhang CUSPARSE_SPMM_CSR_ALG2 = 6, 42afb2bd1cSJunchao Zhang } cusparseSpMMAlg_t; 43afb2bd1cSJunchao Zhang 44afb2bd1cSJunchao Zhang typedef enum { 45afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG1 = 1, // faster than V2 (in general), deterministc 46afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG2 = 2 // low memory requirement, non-deterministc 47afb2bd1cSJunchao Zhang } cusparseCsr2CscAlg_t; 48afb2bd1cSJunchao Zhang */ 49afb2bd1cSJunchao Zhang const char *const MatCUSPARSESpMVAlgorithms[] = {"MV_ALG_DEFAULT","COOMV_ALG", "CSRMV_ALG1","CSRMV_ALG2", "cusparseSpMVAlg_t","CUSPARSE_",0}; 50afb2bd1cSJunchao Zhang const char *const MatCUSPARSESpMMAlgorithms[] = {"ALG_DEFAULT","COO_ALG1","COO_ALG2","COO_ALG3","CSR_ALG1","COO_ALG4","CSR_ALG2","cusparseSpMMAlg_t","CUSPARSE_SPMM_",0}; 51afb2bd1cSJunchao Zhang const char *const MatCUSPARSECsr2CscAlgorithms[] = {"INVALID"/*cusparse does not have enum 0! We created one*/,"ALG1","ALG2","cusparseCsr2CscAlg_t","CUSPARSE_CSR2CSC_",0}; 52afb2bd1cSJunchao Zhang #endif 539ae82921SPaul Mullowney 54087f3262SPaul Mullowney static PetscErrorCode MatICCFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,const MatFactorInfo*); 55087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,const MatFactorInfo*); 56087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorNumeric_SeqAIJCUSPARSE(Mat,Mat,const MatFactorInfo*); 57087f3262SPaul Mullowney 586fa9248bSJed Brown static PetscErrorCode MatILUFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,IS,const MatFactorInfo*); 596fa9248bSJed Brown static PetscErrorCode MatLUFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,IS,const MatFactorInfo*); 606fa9248bSJed Brown static PetscErrorCode MatLUFactorNumeric_SeqAIJCUSPARSE(Mat,Mat,const MatFactorInfo*); 61087f3262SPaul Mullowney 626fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE(Mat,Vec,Vec); 636fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE_NaturalOrdering(Mat,Vec,Vec); 646fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE(Mat,Vec,Vec); 656fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering(Mat,Vec,Vec); 664416b707SBarry Smith static PetscErrorCode MatSetFromOptions_SeqAIJCUSPARSE(PetscOptionItems *PetscOptionsObject,Mat); 67a587d139SMark static PetscErrorCode MatAXPY_SeqAIJCUSPARSE(Mat,PetscScalar,Mat,MatStructure); 6833c9ba73SStefano Zampini static PetscErrorCode MatScale_SeqAIJCUSPARSE(Mat,PetscScalar); 696fa9248bSJed Brown static PetscErrorCode MatMult_SeqAIJCUSPARSE(Mat,Vec,Vec); 706fa9248bSJed Brown static PetscErrorCode MatMultAdd_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec); 716fa9248bSJed Brown static PetscErrorCode MatMultTranspose_SeqAIJCUSPARSE(Mat,Vec,Vec); 726fa9248bSJed Brown static PetscErrorCode MatMultTransposeAdd_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec); 73e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTranspose_SeqAIJCUSPARSE(Mat,Vec,Vec); 74e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTransposeAdd_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec); 75e6e9a74fSStefano Zampini static PetscErrorCode MatMultAddKernel_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec,PetscBool,PetscBool); 769ae82921SPaul Mullowney 777f756511SDominic Meiser static PetscErrorCode CsrMatrix_Destroy(CsrMatrix**); 78470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSETriFactorStruct**); 79470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSEMultStruct**,MatCUSPARSEStorageFormat); 80470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSETriFactors_Destroy(Mat_SeqAIJCUSPARSETriFactors**); 81470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSE_Destroy(Mat_SeqAIJCUSPARSE**); 827f756511SDominic Meiser 83*042217e8SBarry Smith PETSC_INTERN PetscErrorCode MatSeqAIJCUSPARSECopyToGPU(Mat); 8457181aedSStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSECopyFromGPU(Mat); 85a49f1ed0SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSEInvalidateTranspose(Mat,PetscBool); 8657181aedSStefano Zampini 877e8381f9SStefano Zampini PETSC_INTERN PetscErrorCode MatSetPreallocationCOO_SeqAIJCUSPARSE(Mat,PetscInt,const PetscInt[],const PetscInt[]); 887e8381f9SStefano Zampini PETSC_INTERN PetscErrorCode MatSetValuesCOO_SeqAIJCUSPARSE(Mat,const PetscScalar[],InsertMode); 897e8381f9SStefano Zampini 90c215019aSStefano Zampini static PetscErrorCode MatSeqAIJCopySubArray_SeqAIJCUSPARSE(Mat,PetscInt,const PetscInt[],PetscScalar[]); 91c215019aSStefano Zampini 92b06137fdSPaul Mullowney PetscErrorCode MatCUSPARSESetStream(Mat A,const cudaStream_t stream) 93b06137fdSPaul Mullowney { 94b06137fdSPaul Mullowney cusparseStatus_t stat; 95b06137fdSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 96b06137fdSPaul Mullowney 97b06137fdSPaul Mullowney PetscFunctionBegin; 98d98d7c49SStefano Zampini if (!cusparsestruct) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing spptr"); 99b06137fdSPaul Mullowney cusparsestruct->stream = stream; 10057d48284SJunchao Zhang stat = cusparseSetStream(cusparsestruct->handle,cusparsestruct->stream);CHKERRCUSPARSE(stat); 101b06137fdSPaul Mullowney PetscFunctionReturn(0); 102b06137fdSPaul Mullowney } 103b06137fdSPaul Mullowney 104b06137fdSPaul Mullowney PetscErrorCode MatCUSPARSESetHandle(Mat A,const cusparseHandle_t handle) 105b06137fdSPaul Mullowney { 106b06137fdSPaul Mullowney cusparseStatus_t stat; 107b06137fdSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 108b06137fdSPaul Mullowney 109b06137fdSPaul Mullowney PetscFunctionBegin; 110d98d7c49SStefano Zampini if (!cusparsestruct) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing spptr"); 1116b1cf21dSAlejandro Lamas Daviña if (cusparsestruct->handle != handle) { 11216a2e217SAlejandro Lamas Daviña if (cusparsestruct->handle) { 11357d48284SJunchao Zhang stat = cusparseDestroy(cusparsestruct->handle);CHKERRCUSPARSE(stat); 11416a2e217SAlejandro Lamas Daviña } 115b06137fdSPaul Mullowney cusparsestruct->handle = handle; 1166b1cf21dSAlejandro Lamas Daviña } 11757d48284SJunchao Zhang stat = cusparseSetPointerMode(cusparsestruct->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 118b06137fdSPaul Mullowney PetscFunctionReturn(0); 119b06137fdSPaul Mullowney } 120b06137fdSPaul Mullowney 121b06137fdSPaul Mullowney PetscErrorCode MatCUSPARSEClearHandle(Mat A) 122b06137fdSPaul Mullowney { 123b06137fdSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 1247e8381f9SStefano Zampini PetscBool flg; 1257e8381f9SStefano Zampini PetscErrorCode ierr; 126ccdfe979SStefano Zampini 127b06137fdSPaul Mullowney PetscFunctionBegin; 1287e8381f9SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 1297e8381f9SStefano Zampini if (!flg || !cusparsestruct) PetscFunctionReturn(0); 130ccdfe979SStefano Zampini if (cusparsestruct->handle) cusparsestruct->handle = 0; 131b06137fdSPaul Mullowney PetscFunctionReturn(0); 132b06137fdSPaul Mullowney } 133b06137fdSPaul Mullowney 134ea799195SBarry Smith PetscErrorCode MatFactorGetSolverType_seqaij_cusparse(Mat A,MatSolverType *type) 1359ae82921SPaul Mullowney { 1369ae82921SPaul Mullowney PetscFunctionBegin; 1379ae82921SPaul Mullowney *type = MATSOLVERCUSPARSE; 1389ae82921SPaul Mullowney PetscFunctionReturn(0); 1399ae82921SPaul Mullowney } 1409ae82921SPaul Mullowney 141c708e6cdSJed Brown /*MC 142087f3262SPaul Mullowney MATSOLVERCUSPARSE = "cusparse" - A matrix type providing triangular solvers for seq matrices 143087f3262SPaul Mullowney on a single GPU of type, seqaijcusparse, aijcusparse, or seqaijcusp, aijcusp. Currently supported 144087f3262SPaul Mullowney algorithms are ILU(k) and ICC(k). Typically, deeper factorizations (larger k) results in poorer 145087f3262SPaul Mullowney performance in the triangular solves. Full LU, and Cholesky decompositions can be solved through the 146087f3262SPaul Mullowney CUSPARSE triangular solve algorithm. However, the performance can be quite poor and thus these 147087f3262SPaul Mullowney algorithms are not recommended. This class does NOT support direct solver operations. 148c708e6cdSJed Brown 1499ae82921SPaul Mullowney Level: beginner 150c708e6cdSJed Brown 1513ca39a21SBarry Smith .seealso: PCFactorSetMatSolverType(), MatSolverType, MatCreateSeqAIJCUSPARSE(), MATAIJCUSPARSE, MatCreateAIJCUSPARSE(), MatCUSPARSESetFormat(), MatCUSPARSEStorageFormat, MatCUSPARSEFormatOperation 152c708e6cdSJed Brown M*/ 1539ae82921SPaul Mullowney 15442c9c57cSBarry Smith PETSC_EXTERN PetscErrorCode MatGetFactor_seqaijcusparse_cusparse(Mat A,MatFactorType ftype,Mat *B) 1559ae82921SPaul Mullowney { 1569ae82921SPaul Mullowney PetscErrorCode ierr; 157bc3f50f2SPaul Mullowney PetscInt n = A->rmap->n; 1589ae82921SPaul Mullowney 1599ae82921SPaul Mullowney PetscFunctionBegin; 160bc3f50f2SPaul Mullowney ierr = MatCreate(PetscObjectComm((PetscObject)A),B);CHKERRQ(ierr); 161bc3f50f2SPaul Mullowney ierr = MatSetSizes(*B,n,n,n,n);CHKERRQ(ierr); 1622c7c0729SBarry Smith (*B)->factortype = ftype; 1639ae82921SPaul Mullowney ierr = MatSetType(*B,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 1642205254eSKarl Rupp 165087f3262SPaul Mullowney if (ftype == MAT_FACTOR_LU || ftype == MAT_FACTOR_ILU || ftype == MAT_FACTOR_ILUDT) { 16633d57670SJed Brown ierr = MatSetBlockSizesFromMats(*B,A,A);CHKERRQ(ierr); 1679ae82921SPaul Mullowney (*B)->ops->ilufactorsymbolic = MatILUFactorSymbolic_SeqAIJCUSPARSE; 1689ae82921SPaul Mullowney (*B)->ops->lufactorsymbolic = MatLUFactorSymbolic_SeqAIJCUSPARSE; 1694ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGND,(char**)&(*B)->preferredordering[MAT_FACTOR_LU]);CHKERRQ(ierr); 1704ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGNATURAL,(char**)&(*B)->preferredordering[MAT_FACTOR_ILU]);CHKERRQ(ierr); 1714ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGNATURAL,(char**)&(*B)->preferredordering[MAT_FACTOR_ILUDT]);CHKERRQ(ierr); 172087f3262SPaul Mullowney } else if (ftype == MAT_FACTOR_CHOLESKY || ftype == MAT_FACTOR_ICC) { 173087f3262SPaul Mullowney (*B)->ops->iccfactorsymbolic = MatICCFactorSymbolic_SeqAIJCUSPARSE; 174087f3262SPaul Mullowney (*B)->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SeqAIJCUSPARSE; 1754ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGND,(char**)&(*B)->preferredordering[MAT_FACTOR_CHOLESKY]);CHKERRQ(ierr); 1764ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGNATURAL,(char**)&(*B)->preferredordering[MAT_FACTOR_ICC]);CHKERRQ(ierr); 1779ae82921SPaul Mullowney } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Factor type not supported for CUSPARSE Matrix Types"); 178bc3f50f2SPaul Mullowney 179fa03d054SJed Brown ierr = MatSeqAIJSetPreallocation(*B,MAT_SKIP_ALLOCATION,NULL);CHKERRQ(ierr); 1804ac6704cSBarry Smith (*B)->canuseordering = PETSC_TRUE; 1813ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)(*B),"MatFactorGetSolverType_C",MatFactorGetSolverType_seqaij_cusparse);CHKERRQ(ierr); 1829ae82921SPaul Mullowney PetscFunctionReturn(0); 1839ae82921SPaul Mullowney } 1849ae82921SPaul Mullowney 185bc3f50f2SPaul Mullowney PETSC_INTERN PetscErrorCode MatCUSPARSESetFormat_SeqAIJCUSPARSE(Mat A,MatCUSPARSEFormatOperation op,MatCUSPARSEStorageFormat format) 186ca45077fSPaul Mullowney { 187aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 1886e111a19SKarl Rupp 189ca45077fSPaul Mullowney PetscFunctionBegin; 190ca45077fSPaul Mullowney switch (op) { 191e057df02SPaul Mullowney case MAT_CUSPARSE_MULT: 192aa372e3fSPaul Mullowney cusparsestruct->format = format; 193ca45077fSPaul Mullowney break; 194e057df02SPaul Mullowney case MAT_CUSPARSE_ALL: 195aa372e3fSPaul Mullowney cusparsestruct->format = format; 196ca45077fSPaul Mullowney break; 197ca45077fSPaul Mullowney default: 19836d62e41SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"unsupported operation %d for MatCUSPARSEFormatOperation. MAT_CUSPARSE_MULT and MAT_CUSPARSE_ALL are currently supported.",op); 199ca45077fSPaul Mullowney } 200ca45077fSPaul Mullowney PetscFunctionReturn(0); 201ca45077fSPaul Mullowney } 2029ae82921SPaul Mullowney 203e057df02SPaul Mullowney /*@ 204e057df02SPaul Mullowney MatCUSPARSESetFormat - Sets the storage format of CUSPARSE matrices for a particular 205e057df02SPaul Mullowney operation. Only the MatMult operation can use different GPU storage formats 206aa372e3fSPaul Mullowney for MPIAIJCUSPARSE matrices. 207e057df02SPaul Mullowney Not Collective 208e057df02SPaul Mullowney 209e057df02SPaul Mullowney Input Parameters: 2108468deeeSKarl Rupp + A - Matrix of type SEQAIJCUSPARSE 21136d62e41SPaul Mullowney . op - MatCUSPARSEFormatOperation. SEQAIJCUSPARSE matrices support MAT_CUSPARSE_MULT and MAT_CUSPARSE_ALL. MPIAIJCUSPARSE matrices support MAT_CUSPARSE_MULT_DIAG, MAT_CUSPARSE_MULT_OFFDIAG, and MAT_CUSPARSE_ALL. 2122692e278SPaul Mullowney - format - MatCUSPARSEStorageFormat (one of MAT_CUSPARSE_CSR, MAT_CUSPARSE_ELL, MAT_CUSPARSE_HYB. The latter two require CUDA 4.2) 213e057df02SPaul Mullowney 214e057df02SPaul Mullowney Output Parameter: 215e057df02SPaul Mullowney 216e057df02SPaul Mullowney Level: intermediate 217e057df02SPaul Mullowney 2188468deeeSKarl Rupp .seealso: MatCUSPARSEStorageFormat, MatCUSPARSEFormatOperation 219e057df02SPaul Mullowney @*/ 220e057df02SPaul Mullowney PetscErrorCode MatCUSPARSESetFormat(Mat A,MatCUSPARSEFormatOperation op,MatCUSPARSEStorageFormat format) 221e057df02SPaul Mullowney { 222e057df02SPaul Mullowney PetscErrorCode ierr; 2236e111a19SKarl Rupp 224e057df02SPaul Mullowney PetscFunctionBegin; 225e057df02SPaul Mullowney PetscValidHeaderSpecific(A, MAT_CLASSID,1); 226e057df02SPaul Mullowney ierr = PetscTryMethod(A,"MatCUSPARSESetFormat_C",(Mat,MatCUSPARSEFormatOperation,MatCUSPARSEStorageFormat),(A,op,format));CHKERRQ(ierr); 227e057df02SPaul Mullowney PetscFunctionReturn(0); 228e057df02SPaul Mullowney } 229e057df02SPaul Mullowney 2301a2c6b5cSJunchao Zhang PetscErrorCode MatSetOption_SeqAIJCUSPARSE(Mat A,MatOption op,PetscBool flg) 231e6e9a74fSStefano Zampini { 232e6e9a74fSStefano Zampini PetscErrorCode ierr; 233e6e9a74fSStefano Zampini 234e6e9a74fSStefano Zampini PetscFunctionBegin; 2351a2c6b5cSJunchao Zhang switch (op) { 2361a2c6b5cSJunchao Zhang case MAT_FORM_EXPLICIT_TRANSPOSE: 2371a2c6b5cSJunchao Zhang /* need to destroy the transpose matrix if present to prevent from logic errors if flg is set to true later */ 2381a2c6b5cSJunchao Zhang if (A->form_explicit_transpose && !flg) {ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr);} 2391a2c6b5cSJunchao Zhang A->form_explicit_transpose = flg; 2401a2c6b5cSJunchao Zhang break; 2411a2c6b5cSJunchao Zhang default: 2421a2c6b5cSJunchao Zhang ierr = MatSetOption_SeqAIJ(A,op,flg);CHKERRQ(ierr); 2431a2c6b5cSJunchao Zhang break; 244e6e9a74fSStefano Zampini } 245e6e9a74fSStefano Zampini PetscFunctionReturn(0); 246e6e9a74fSStefano Zampini } 247e6e9a74fSStefano Zampini 248bddcd29dSMark Adams static PetscErrorCode MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(Mat A); 249bddcd29dSMark Adams 250bddcd29dSMark Adams static PetscErrorCode MatLUFactorNumeric_SeqAIJCUSPARSE(Mat B,Mat A,const MatFactorInfo *info) 251bddcd29dSMark Adams { 252bddcd29dSMark Adams Mat_SeqAIJ *b = (Mat_SeqAIJ*)B->data; 253bddcd29dSMark Adams IS isrow = b->row,iscol = b->col; 254bddcd29dSMark Adams PetscBool row_identity,col_identity; 255bddcd29dSMark Adams PetscErrorCode ierr; 256bddcd29dSMark Adams 257bddcd29dSMark Adams PetscFunctionBegin; 258bddcd29dSMark Adams ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 259bddcd29dSMark Adams ierr = MatLUFactorNumeric_SeqAIJ(B,A,info);CHKERRQ(ierr); 260bddcd29dSMark Adams B->offloadmask = PETSC_OFFLOAD_CPU; 261bddcd29dSMark Adams /* determine which version of MatSolve needs to be used. */ 262bddcd29dSMark Adams ierr = ISIdentity(isrow,&row_identity);CHKERRQ(ierr); 263bddcd29dSMark Adams ierr = ISIdentity(iscol,&col_identity);CHKERRQ(ierr); 264bddcd29dSMark Adams if (row_identity && col_identity) { 265bddcd29dSMark Adams B->ops->solve = MatSolve_SeqAIJCUSPARSE_NaturalOrdering; 266bddcd29dSMark Adams B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering; 267bddcd29dSMark Adams B->ops->matsolve = NULL; 268bddcd29dSMark Adams B->ops->matsolvetranspose = NULL; 269bddcd29dSMark Adams } else { 270bddcd29dSMark Adams B->ops->solve = MatSolve_SeqAIJCUSPARSE; 271bddcd29dSMark Adams B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE; 272bddcd29dSMark Adams B->ops->matsolve = NULL; 273bddcd29dSMark Adams B->ops->matsolvetranspose = NULL; 274bddcd29dSMark Adams } 275bddcd29dSMark Adams 276bddcd29dSMark Adams /* get the triangular factors */ 277bddcd29dSMark Adams ierr = MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(B);CHKERRQ(ierr); 278bddcd29dSMark Adams PetscFunctionReturn(0); 279bddcd29dSMark Adams } 280bddcd29dSMark Adams 2814416b707SBarry Smith static PetscErrorCode MatSetFromOptions_SeqAIJCUSPARSE(PetscOptionItems *PetscOptionsObject,Mat A) 2829ae82921SPaul Mullowney { 2839ae82921SPaul Mullowney PetscErrorCode ierr; 284e057df02SPaul Mullowney MatCUSPARSEStorageFormat format; 2859ae82921SPaul Mullowney PetscBool flg; 286a183c035SDominic Meiser Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 2876e111a19SKarl Rupp 2889ae82921SPaul Mullowney PetscFunctionBegin; 289e55864a3SBarry Smith ierr = PetscOptionsHead(PetscOptionsObject,"SeqAIJCUSPARSE options");CHKERRQ(ierr); 2909ae82921SPaul Mullowney if (A->factortype == MAT_FACTOR_NONE) { 291e057df02SPaul Mullowney ierr = PetscOptionsEnum("-mat_cusparse_mult_storage_format","sets storage format of (seq)aijcusparse gpu matrices for SpMV", 292a183c035SDominic Meiser "MatCUSPARSESetFormat",MatCUSPARSEStorageFormats,(PetscEnum)cusparsestruct->format,(PetscEnum*)&format,&flg);CHKERRQ(ierr); 293afb2bd1cSJunchao Zhang if (flg) {ierr = MatCUSPARSESetFormat(A,MAT_CUSPARSE_MULT,format);CHKERRQ(ierr);} 294afb2bd1cSJunchao Zhang 2954c87dfd4SPaul Mullowney ierr = PetscOptionsEnum("-mat_cusparse_storage_format","sets storage format of (seq)aijcusparse gpu matrices for SpMV and TriSolve", 296a183c035SDominic Meiser "MatCUSPARSESetFormat",MatCUSPARSEStorageFormats,(PetscEnum)cusparsestruct->format,(PetscEnum*)&format,&flg);CHKERRQ(ierr); 297afb2bd1cSJunchao Zhang if (flg) {ierr = MatCUSPARSESetFormat(A,MAT_CUSPARSE_ALL,format);CHKERRQ(ierr);} 298afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 299afb2bd1cSJunchao Zhang ierr = PetscOptionsEnum("-mat_cusparse_spmv_alg","sets cuSPARSE algorithm used in sparse-mat dense-vector multiplication (SpMV)", 300afb2bd1cSJunchao Zhang "cusparseSpMVAlg_t",MatCUSPARSESpMVAlgorithms,(PetscEnum)cusparsestruct->spmvAlg,(PetscEnum*)&cusparsestruct->spmvAlg,&flg);CHKERRQ(ierr); 301afb2bd1cSJunchao Zhang /* If user did use this option, check its consistency with cuSPARSE, since PetscOptionsEnum() sets enum values based on their position in MatCUSPARSESpMVAlgorithms[] */ 302afb2bd1cSJunchao Zhang if (flg && CUSPARSE_CSRMV_ALG1 != 2) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseSpMVAlg_t has been changed but PETSc has not been updated accordingly"); 303afb2bd1cSJunchao Zhang 304afb2bd1cSJunchao Zhang ierr = PetscOptionsEnum("-mat_cusparse_spmm_alg","sets cuSPARSE algorithm used in sparse-mat dense-mat multiplication (SpMM)", 305afb2bd1cSJunchao Zhang "cusparseSpMMAlg_t",MatCUSPARSESpMMAlgorithms,(PetscEnum)cusparsestruct->spmmAlg,(PetscEnum*)&cusparsestruct->spmmAlg,&flg);CHKERRQ(ierr); 306afb2bd1cSJunchao Zhang if (flg && CUSPARSE_SPMM_CSR_ALG1 != 4) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseSpMMAlg_t has been changed but PETSc has not been updated accordingly"); 307afb2bd1cSJunchao Zhang 308afb2bd1cSJunchao Zhang ierr = PetscOptionsEnum("-mat_cusparse_csr2csc_alg","sets cuSPARSE algorithm used in converting CSR matrices to CSC matrices", 309afb2bd1cSJunchao Zhang "cusparseCsr2CscAlg_t",MatCUSPARSECsr2CscAlgorithms,(PetscEnum)cusparsestruct->csr2cscAlg,(PetscEnum*)&cusparsestruct->csr2cscAlg,&flg);CHKERRQ(ierr); 310afb2bd1cSJunchao Zhang if (flg && CUSPARSE_CSR2CSC_ALG1 != 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseCsr2CscAlg_t has been changed but PETSc has not been updated accordingly"); 311afb2bd1cSJunchao Zhang #endif 3124c87dfd4SPaul Mullowney } 3130af67c1bSStefano Zampini ierr = PetscOptionsTail();CHKERRQ(ierr); 3149ae82921SPaul Mullowney PetscFunctionReturn(0); 3159ae82921SPaul Mullowney } 3169ae82921SPaul Mullowney 3176fa9248bSJed Brown static PetscErrorCode MatILUFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS isrow,IS iscol,const MatFactorInfo *info) 3189ae82921SPaul Mullowney { 319da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 3209ae82921SPaul Mullowney PetscErrorCode ierr; 3219ae82921SPaul Mullowney 3229ae82921SPaul Mullowney PetscFunctionBegin; 323da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 3249ae82921SPaul Mullowney ierr = MatILUFactorSymbolic_SeqAIJ(B,A,isrow,iscol,info);CHKERRQ(ierr); 3259ae82921SPaul Mullowney B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJCUSPARSE; 3269ae82921SPaul Mullowney PetscFunctionReturn(0); 3279ae82921SPaul Mullowney } 3289ae82921SPaul Mullowney 3296fa9248bSJed Brown static PetscErrorCode MatLUFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS isrow,IS iscol,const MatFactorInfo *info) 3309ae82921SPaul Mullowney { 331da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 3329ae82921SPaul Mullowney PetscErrorCode ierr; 3339ae82921SPaul Mullowney 3349ae82921SPaul Mullowney PetscFunctionBegin; 335da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 3369ae82921SPaul Mullowney ierr = MatLUFactorSymbolic_SeqAIJ(B,A,isrow,iscol,info);CHKERRQ(ierr); 3379ae82921SPaul Mullowney B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJCUSPARSE; 3389ae82921SPaul Mullowney PetscFunctionReturn(0); 3399ae82921SPaul Mullowney } 3409ae82921SPaul Mullowney 341087f3262SPaul Mullowney static PetscErrorCode MatICCFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS perm,const MatFactorInfo *info) 342087f3262SPaul Mullowney { 343da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 344087f3262SPaul Mullowney PetscErrorCode ierr; 345087f3262SPaul Mullowney 346087f3262SPaul Mullowney PetscFunctionBegin; 347da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 348087f3262SPaul Mullowney ierr = MatICCFactorSymbolic_SeqAIJ(B,A,perm,info);CHKERRQ(ierr); 349087f3262SPaul Mullowney B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJCUSPARSE; 350087f3262SPaul Mullowney PetscFunctionReturn(0); 351087f3262SPaul Mullowney } 352087f3262SPaul Mullowney 353087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS perm,const MatFactorInfo *info) 354087f3262SPaul Mullowney { 355da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 356087f3262SPaul Mullowney PetscErrorCode ierr; 357087f3262SPaul Mullowney 358087f3262SPaul Mullowney PetscFunctionBegin; 359da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 360087f3262SPaul Mullowney ierr = MatCholeskyFactorSymbolic_SeqAIJ(B,A,perm,info);CHKERRQ(ierr); 361087f3262SPaul Mullowney B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJCUSPARSE; 362087f3262SPaul Mullowney PetscFunctionReturn(0); 363087f3262SPaul Mullowney } 364087f3262SPaul Mullowney 365087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEBuildILULowerTriMatrix(Mat A) 3669ae82921SPaul Mullowney { 3679ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 3689ae82921SPaul Mullowney PetscInt n = A->rmap->n; 3699ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 370aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 3719ae82921SPaul Mullowney cusparseStatus_t stat; 3729ae82921SPaul Mullowney const PetscInt *ai = a->i,*aj = a->j,*vi; 3739ae82921SPaul Mullowney const MatScalar *aa = a->a,*v; 3749ae82921SPaul Mullowney PetscInt *AiLo, *AjLo; 3759ae82921SPaul Mullowney PetscInt i,nz, nzLower, offset, rowOffset; 376b175d8bbSPaul Mullowney PetscErrorCode ierr; 37757d48284SJunchao Zhang cudaError_t cerr; 3789ae82921SPaul Mullowney 3799ae82921SPaul Mullowney PetscFunctionBegin; 380cf00fe3bSKarl Rupp if (!n) PetscFunctionReturn(0); 381c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 3829ae82921SPaul Mullowney try { 3839ae82921SPaul Mullowney /* first figure out the number of nonzeros in the lower triangular matrix including 1's on the diagonal. */ 3849ae82921SPaul Mullowney nzLower=n+ai[n]-ai[1]; 385da79fbbcSStefano Zampini if (!loTriFactor) { 3862cbc15d9SMark PetscScalar *AALo; 3872cbc15d9SMark 3882cbc15d9SMark cerr = cudaMallocHost((void**) &AALo, nzLower*sizeof(PetscScalar));CHKERRCUDA(cerr); 3899ae82921SPaul Mullowney 3909ae82921SPaul Mullowney /* Allocate Space for the lower triangular matrix */ 39157d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AiLo, (n+1)*sizeof(PetscInt));CHKERRCUDA(cerr); 39257d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AjLo, nzLower*sizeof(PetscInt));CHKERRCUDA(cerr); 3939ae82921SPaul Mullowney 3949ae82921SPaul Mullowney /* Fill the lower triangular matrix */ 3959ae82921SPaul Mullowney AiLo[0] = (PetscInt) 0; 3969ae82921SPaul Mullowney AiLo[n] = nzLower; 3979ae82921SPaul Mullowney AjLo[0] = (PetscInt) 0; 3989ae82921SPaul Mullowney AALo[0] = (MatScalar) 1.0; 3999ae82921SPaul Mullowney v = aa; 4009ae82921SPaul Mullowney vi = aj; 4019ae82921SPaul Mullowney offset = 1; 4029ae82921SPaul Mullowney rowOffset= 1; 4039ae82921SPaul Mullowney for (i=1; i<n; i++) { 4049ae82921SPaul Mullowney nz = ai[i+1] - ai[i]; 405e057df02SPaul Mullowney /* additional 1 for the term on the diagonal */ 4069ae82921SPaul Mullowney AiLo[i] = rowOffset; 4079ae82921SPaul Mullowney rowOffset += nz+1; 4089ae82921SPaul Mullowney 409580bdb30SBarry Smith ierr = PetscArraycpy(&(AjLo[offset]), vi, nz);CHKERRQ(ierr); 410580bdb30SBarry Smith ierr = PetscArraycpy(&(AALo[offset]), v, nz);CHKERRQ(ierr); 4119ae82921SPaul Mullowney 4129ae82921SPaul Mullowney offset += nz; 4139ae82921SPaul Mullowney AjLo[offset] = (PetscInt) i; 4149ae82921SPaul Mullowney AALo[offset] = (MatScalar) 1.0; 4159ae82921SPaul Mullowney offset += 1; 4169ae82921SPaul Mullowney 4179ae82921SPaul Mullowney v += nz; 4189ae82921SPaul Mullowney vi += nz; 4199ae82921SPaul Mullowney } 4202205254eSKarl Rupp 421aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 422da79fbbcSStefano Zampini ierr = PetscNew(&loTriFactor);CHKERRQ(ierr); 423da79fbbcSStefano Zampini loTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 424aa372e3fSPaul Mullowney /* Create the matrix description */ 42557d48284SJunchao Zhang stat = cusparseCreateMatDescr(&loTriFactor->descr);CHKERRCUSPARSE(stat); 42657d48284SJunchao Zhang stat = cusparseSetMatIndexBase(loTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 4271b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 428afb2bd1cSJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 429afb2bd1cSJunchao Zhang #else 43057d48284SJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 431afb2bd1cSJunchao Zhang #endif 43257d48284SJunchao Zhang stat = cusparseSetMatFillMode(loTriFactor->descr, CUSPARSE_FILL_MODE_LOWER);CHKERRCUSPARSE(stat); 43357d48284SJunchao Zhang stat = cusparseSetMatDiagType(loTriFactor->descr, CUSPARSE_DIAG_TYPE_UNIT);CHKERRCUSPARSE(stat); 434aa372e3fSPaul Mullowney 435aa372e3fSPaul Mullowney /* set the operation */ 436aa372e3fSPaul Mullowney loTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 437aa372e3fSPaul Mullowney 438aa372e3fSPaul Mullowney /* set the matrix */ 439aa372e3fSPaul Mullowney loTriFactor->csrMat = new CsrMatrix; 440aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows = n; 441aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols = n; 442aa372e3fSPaul Mullowney loTriFactor->csrMat->num_entries = nzLower; 443aa372e3fSPaul Mullowney 444aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(n+1); 445aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->assign(AiLo, AiLo+n+1); 446aa372e3fSPaul Mullowney 447aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(nzLower); 448aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->assign(AjLo, AjLo+nzLower); 449aa372e3fSPaul Mullowney 450aa372e3fSPaul Mullowney loTriFactor->csrMat->values = new THRUSTARRAY(nzLower); 451aa372e3fSPaul Mullowney loTriFactor->csrMat->values->assign(AALo, AALo+nzLower); 452aa372e3fSPaul Mullowney 453afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 454da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 455afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&loTriFactor->solveInfo);CHKERRCUSPARSE(stat); 4561b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 457afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, loTriFactor->solveOp, 458afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 459afb2bd1cSJunchao Zhang loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 460afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo, 461afb2bd1cSJunchao Zhang &loTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 462afb2bd1cSJunchao Zhang cerr = cudaMalloc(&loTriFactor->solveBuffer,loTriFactor->solveBufferSize);CHKERRCUDA(cerr); 463afb2bd1cSJunchao Zhang #endif 464afb2bd1cSJunchao Zhang 465aa372e3fSPaul Mullowney /* perform the solve analysis */ 466aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, loTriFactor->solveOp, 467aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 468aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 469d49cd2b7SBarry Smith loTriFactor->csrMat->column_indices->data().get(), 4701b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 471d49cd2b7SBarry Smith loTriFactor->solveInfo, 472d49cd2b7SBarry Smith loTriFactor->solvePolicy, loTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 473d49cd2b7SBarry Smith #else 474d49cd2b7SBarry Smith loTriFactor->solveInfo);CHKERRCUSPARSE(stat); 475afb2bd1cSJunchao Zhang #endif 476da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 477da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 478aa372e3fSPaul Mullowney 479da79fbbcSStefano Zampini /* assign the pointer */ 480aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->loTriFactorPtr = loTriFactor; 4812cbc15d9SMark loTriFactor->AA_h = AALo; 48257d48284SJunchao Zhang cerr = cudaFreeHost(AiLo);CHKERRCUDA(cerr); 48357d48284SJunchao Zhang cerr = cudaFreeHost(AjLo);CHKERRCUDA(cerr); 4844863603aSSatish Balay ierr = PetscLogCpuToGpu((n+1+nzLower)*sizeof(int)+nzLower*sizeof(PetscScalar));CHKERRQ(ierr); 485da79fbbcSStefano Zampini } else { /* update values only */ 4862cbc15d9SMark if (!loTriFactor->AA_h) { 4872cbc15d9SMark cerr = cudaMallocHost((void**) &loTriFactor->AA_h, nzLower*sizeof(PetscScalar));CHKERRCUDA(cerr); 4882cbc15d9SMark } 489da79fbbcSStefano Zampini /* Fill the lower triangular matrix */ 4902cbc15d9SMark loTriFactor->AA_h[0] = 1.0; 491da79fbbcSStefano Zampini v = aa; 492da79fbbcSStefano Zampini vi = aj; 493da79fbbcSStefano Zampini offset = 1; 494da79fbbcSStefano Zampini for (i=1; i<n; i++) { 495da79fbbcSStefano Zampini nz = ai[i+1] - ai[i]; 4962cbc15d9SMark ierr = PetscArraycpy(&(loTriFactor->AA_h[offset]), v, nz);CHKERRQ(ierr); 497da79fbbcSStefano Zampini offset += nz; 4982cbc15d9SMark loTriFactor->AA_h[offset] = 1.0; 499da79fbbcSStefano Zampini offset += 1; 500da79fbbcSStefano Zampini v += nz; 501da79fbbcSStefano Zampini } 5022cbc15d9SMark loTriFactor->csrMat->values->assign(loTriFactor->AA_h, loTriFactor->AA_h+nzLower); 503da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(nzLower*sizeof(PetscScalar));CHKERRQ(ierr); 504da79fbbcSStefano Zampini } 5059ae82921SPaul Mullowney } catch(char *ex) { 5069ae82921SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 5079ae82921SPaul Mullowney } 5089ae82921SPaul Mullowney } 5099ae82921SPaul Mullowney PetscFunctionReturn(0); 5109ae82921SPaul Mullowney } 5119ae82921SPaul Mullowney 512087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEBuildILUUpperTriMatrix(Mat A) 5139ae82921SPaul Mullowney { 5149ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 5159ae82921SPaul Mullowney PetscInt n = A->rmap->n; 5169ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 517aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 5189ae82921SPaul Mullowney cusparseStatus_t stat; 5199ae82921SPaul Mullowney const PetscInt *aj = a->j,*adiag = a->diag,*vi; 5209ae82921SPaul Mullowney const MatScalar *aa = a->a,*v; 5219ae82921SPaul Mullowney PetscInt *AiUp, *AjUp; 5229ae82921SPaul Mullowney PetscInt i,nz, nzUpper, offset; 5239ae82921SPaul Mullowney PetscErrorCode ierr; 52457d48284SJunchao Zhang cudaError_t cerr; 5259ae82921SPaul Mullowney 5269ae82921SPaul Mullowney PetscFunctionBegin; 527cf00fe3bSKarl Rupp if (!n) PetscFunctionReturn(0); 528c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 5299ae82921SPaul Mullowney try { 5309ae82921SPaul Mullowney /* next, figure out the number of nonzeros in the upper triangular matrix. */ 5319ae82921SPaul Mullowney nzUpper = adiag[0]-adiag[n]; 532da79fbbcSStefano Zampini if (!upTriFactor) { 5332cbc15d9SMark PetscScalar *AAUp; 5342cbc15d9SMark 5352cbc15d9SMark cerr = cudaMallocHost((void**) &AAUp, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 5362cbc15d9SMark 5379ae82921SPaul Mullowney /* Allocate Space for the upper triangular matrix */ 53857d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AiUp, (n+1)*sizeof(PetscInt));CHKERRCUDA(cerr); 53957d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AjUp, nzUpper*sizeof(PetscInt));CHKERRCUDA(cerr); 5409ae82921SPaul Mullowney 5419ae82921SPaul Mullowney /* Fill the upper triangular matrix */ 5429ae82921SPaul Mullowney AiUp[0]=(PetscInt) 0; 5439ae82921SPaul Mullowney AiUp[n]=nzUpper; 5449ae82921SPaul Mullowney offset = nzUpper; 5459ae82921SPaul Mullowney for (i=n-1; i>=0; i--) { 5469ae82921SPaul Mullowney v = aa + adiag[i+1] + 1; 5479ae82921SPaul Mullowney vi = aj + adiag[i+1] + 1; 5489ae82921SPaul Mullowney 549e057df02SPaul Mullowney /* number of elements NOT on the diagonal */ 5509ae82921SPaul Mullowney nz = adiag[i] - adiag[i+1]-1; 5519ae82921SPaul Mullowney 552e057df02SPaul Mullowney /* decrement the offset */ 5539ae82921SPaul Mullowney offset -= (nz+1); 5549ae82921SPaul Mullowney 555e057df02SPaul Mullowney /* first, set the diagonal elements */ 5569ae82921SPaul Mullowney AjUp[offset] = (PetscInt) i; 55709f51544SAlejandro Lamas Daviña AAUp[offset] = (MatScalar)1./v[nz]; 5589ae82921SPaul Mullowney AiUp[i] = AiUp[i+1] - (nz+1); 5599ae82921SPaul Mullowney 560580bdb30SBarry Smith ierr = PetscArraycpy(&(AjUp[offset+1]), vi, nz);CHKERRQ(ierr); 561580bdb30SBarry Smith ierr = PetscArraycpy(&(AAUp[offset+1]), v, nz);CHKERRQ(ierr); 5629ae82921SPaul Mullowney } 5632205254eSKarl Rupp 564aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 565da79fbbcSStefano Zampini ierr = PetscNew(&upTriFactor);CHKERRQ(ierr); 566da79fbbcSStefano Zampini upTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 5672205254eSKarl Rupp 568aa372e3fSPaul Mullowney /* Create the matrix description */ 56957d48284SJunchao Zhang stat = cusparseCreateMatDescr(&upTriFactor->descr);CHKERRCUSPARSE(stat); 57057d48284SJunchao Zhang stat = cusparseSetMatIndexBase(upTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 5711b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 572afb2bd1cSJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 573afb2bd1cSJunchao Zhang #else 57457d48284SJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 575afb2bd1cSJunchao Zhang #endif 57657d48284SJunchao Zhang stat = cusparseSetMatFillMode(upTriFactor->descr, CUSPARSE_FILL_MODE_UPPER);CHKERRCUSPARSE(stat); 57757d48284SJunchao Zhang stat = cusparseSetMatDiagType(upTriFactor->descr, CUSPARSE_DIAG_TYPE_NON_UNIT);CHKERRCUSPARSE(stat); 578aa372e3fSPaul Mullowney 579aa372e3fSPaul Mullowney /* set the operation */ 580aa372e3fSPaul Mullowney upTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 581aa372e3fSPaul Mullowney 582aa372e3fSPaul Mullowney /* set the matrix */ 583aa372e3fSPaul Mullowney upTriFactor->csrMat = new CsrMatrix; 584aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows = n; 585aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols = n; 586aa372e3fSPaul Mullowney upTriFactor->csrMat->num_entries = nzUpper; 587aa372e3fSPaul Mullowney 588aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(n+1); 589aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->assign(AiUp, AiUp+n+1); 590aa372e3fSPaul Mullowney 591aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(nzUpper); 592aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->assign(AjUp, AjUp+nzUpper); 593aa372e3fSPaul Mullowney 594aa372e3fSPaul Mullowney upTriFactor->csrMat->values = new THRUSTARRAY(nzUpper); 595aa372e3fSPaul Mullowney upTriFactor->csrMat->values->assign(AAUp, AAUp+nzUpper); 596aa372e3fSPaul Mullowney 597afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 598da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 599afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&upTriFactor->solveInfo);CHKERRCUSPARSE(stat); 6001b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 601afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, upTriFactor->solveOp, 602afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 603afb2bd1cSJunchao Zhang upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 604afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo, 605afb2bd1cSJunchao Zhang &upTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 606afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactor->solveBuffer,upTriFactor->solveBufferSize);CHKERRCUDA(cerr); 607afb2bd1cSJunchao Zhang #endif 608afb2bd1cSJunchao Zhang 609aa372e3fSPaul Mullowney /* perform the solve analysis */ 610aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, upTriFactor->solveOp, 611aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 612aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 613d49cd2b7SBarry Smith upTriFactor->csrMat->column_indices->data().get(), 6141b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 615d49cd2b7SBarry Smith upTriFactor->solveInfo, 616d49cd2b7SBarry Smith upTriFactor->solvePolicy, upTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 617d49cd2b7SBarry Smith #else 618d49cd2b7SBarry Smith upTriFactor->solveInfo);CHKERRCUSPARSE(stat); 619afb2bd1cSJunchao Zhang #endif 620da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 621da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 622aa372e3fSPaul Mullowney 623da79fbbcSStefano Zampini /* assign the pointer */ 624aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->upTriFactorPtr = upTriFactor; 6252cbc15d9SMark upTriFactor->AA_h = AAUp; 62657d48284SJunchao Zhang cerr = cudaFreeHost(AiUp);CHKERRCUDA(cerr); 62757d48284SJunchao Zhang cerr = cudaFreeHost(AjUp);CHKERRCUDA(cerr); 6284863603aSSatish Balay ierr = PetscLogCpuToGpu((n+1+nzUpper)*sizeof(int)+nzUpper*sizeof(PetscScalar));CHKERRQ(ierr); 629da79fbbcSStefano Zampini } else { 6302cbc15d9SMark if (!upTriFactor->AA_h) { 6312cbc15d9SMark cerr = cudaMallocHost((void**) &upTriFactor->AA_h, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 6322cbc15d9SMark } 633da79fbbcSStefano Zampini /* Fill the upper triangular matrix */ 634da79fbbcSStefano Zampini offset = nzUpper; 635da79fbbcSStefano Zampini for (i=n-1; i>=0; i--) { 636da79fbbcSStefano Zampini v = aa + adiag[i+1] + 1; 637da79fbbcSStefano Zampini 638da79fbbcSStefano Zampini /* number of elements NOT on the diagonal */ 639da79fbbcSStefano Zampini nz = adiag[i] - adiag[i+1]-1; 640da79fbbcSStefano Zampini 641da79fbbcSStefano Zampini /* decrement the offset */ 642da79fbbcSStefano Zampini offset -= (nz+1); 643da79fbbcSStefano Zampini 644da79fbbcSStefano Zampini /* first, set the diagonal elements */ 6452cbc15d9SMark upTriFactor->AA_h[offset] = 1./v[nz]; 6462cbc15d9SMark ierr = PetscArraycpy(&(upTriFactor->AA_h[offset+1]), v, nz);CHKERRQ(ierr); 647da79fbbcSStefano Zampini } 6482cbc15d9SMark upTriFactor->csrMat->values->assign(upTriFactor->AA_h, upTriFactor->AA_h+nzUpper); 649da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(nzUpper*sizeof(PetscScalar));CHKERRQ(ierr); 650da79fbbcSStefano Zampini } 6519ae82921SPaul Mullowney } catch(char *ex) { 6529ae82921SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 6539ae82921SPaul Mullowney } 6549ae82921SPaul Mullowney } 6559ae82921SPaul Mullowney PetscFunctionReturn(0); 6569ae82921SPaul Mullowney } 6579ae82921SPaul Mullowney 658087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(Mat A) 6599ae82921SPaul Mullowney { 6609ae82921SPaul Mullowney PetscErrorCode ierr; 6619ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 6629ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 6639ae82921SPaul Mullowney IS isrow = a->row,iscol = a->icol; 6649ae82921SPaul Mullowney PetscBool row_identity,col_identity; 6659ae82921SPaul Mullowney PetscInt n = A->rmap->n; 6669ae82921SPaul Mullowney 6679ae82921SPaul Mullowney PetscFunctionBegin; 668da79fbbcSStefano Zampini if (!cusparseTriFactors) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 669087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEBuildILULowerTriMatrix(A);CHKERRQ(ierr); 670087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEBuildILUUpperTriMatrix(A);CHKERRQ(ierr); 6712205254eSKarl Rupp 672da79fbbcSStefano Zampini if (!cusparseTriFactors->workVector) { cusparseTriFactors->workVector = new THRUSTARRAY(n); } 673aa372e3fSPaul Mullowney cusparseTriFactors->nnz=a->nz; 6749ae82921SPaul Mullowney 675c70f7ee4SJunchao Zhang A->offloadmask = PETSC_OFFLOAD_BOTH; 676e057df02SPaul Mullowney /* lower triangular indices */ 6779ae82921SPaul Mullowney ierr = ISIdentity(isrow,&row_identity);CHKERRQ(ierr); 678da79fbbcSStefano Zampini if (!row_identity && !cusparseTriFactors->rpermIndices) { 679da79fbbcSStefano Zampini const PetscInt *r; 680da79fbbcSStefano Zampini 681da79fbbcSStefano Zampini ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 682aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices = new THRUSTINTARRAY(n); 683aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices->assign(r, r+n); 6849ae82921SPaul Mullowney ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 685da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscInt));CHKERRQ(ierr); 686da79fbbcSStefano Zampini } 6879ae82921SPaul Mullowney 688e057df02SPaul Mullowney /* upper triangular indices */ 6899ae82921SPaul Mullowney ierr = ISIdentity(iscol,&col_identity);CHKERRQ(ierr); 690da79fbbcSStefano Zampini if (!col_identity && !cusparseTriFactors->cpermIndices) { 691da79fbbcSStefano Zampini const PetscInt *c; 692da79fbbcSStefano Zampini 693da79fbbcSStefano Zampini ierr = ISGetIndices(iscol,&c);CHKERRQ(ierr); 694aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices = new THRUSTINTARRAY(n); 695aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices->assign(c, c+n); 6969ae82921SPaul Mullowney ierr = ISRestoreIndices(iscol,&c);CHKERRQ(ierr); 697da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscInt));CHKERRQ(ierr); 698da79fbbcSStefano Zampini } 6999ae82921SPaul Mullowney PetscFunctionReturn(0); 7009ae82921SPaul Mullowney } 7019ae82921SPaul Mullowney 702087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEBuildICCTriMatrices(Mat A) 703087f3262SPaul Mullowney { 704087f3262SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 705087f3262SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 706aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 707aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 708087f3262SPaul Mullowney cusparseStatus_t stat; 709087f3262SPaul Mullowney PetscErrorCode ierr; 71057d48284SJunchao Zhang cudaError_t cerr; 711087f3262SPaul Mullowney PetscInt *AiUp, *AjUp; 712087f3262SPaul Mullowney PetscScalar *AAUp; 713087f3262SPaul Mullowney PetscScalar *AALo; 714087f3262SPaul Mullowney PetscInt nzUpper = a->nz,n = A->rmap->n,i,offset,nz,j; 715087f3262SPaul Mullowney Mat_SeqSBAIJ *b = (Mat_SeqSBAIJ*)A->data; 716087f3262SPaul Mullowney const PetscInt *ai = b->i,*aj = b->j,*vj; 717087f3262SPaul Mullowney const MatScalar *aa = b->a,*v; 718087f3262SPaul Mullowney 719087f3262SPaul Mullowney PetscFunctionBegin; 720cf00fe3bSKarl Rupp if (!n) PetscFunctionReturn(0); 721c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 722087f3262SPaul Mullowney try { 723da79fbbcSStefano Zampini cerr = cudaMallocHost((void**) &AAUp, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 724da79fbbcSStefano Zampini cerr = cudaMallocHost((void**) &AALo, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 725da79fbbcSStefano Zampini if (!upTriFactor && !loTriFactor) { 726087f3262SPaul Mullowney /* Allocate Space for the upper triangular matrix */ 72757d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AiUp, (n+1)*sizeof(PetscInt));CHKERRCUDA(cerr); 72857d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AjUp, nzUpper*sizeof(PetscInt));CHKERRCUDA(cerr); 729087f3262SPaul Mullowney 730087f3262SPaul Mullowney /* Fill the upper triangular matrix */ 731087f3262SPaul Mullowney AiUp[0]=(PetscInt) 0; 732087f3262SPaul Mullowney AiUp[n]=nzUpper; 733087f3262SPaul Mullowney offset = 0; 734087f3262SPaul Mullowney for (i=0; i<n; i++) { 735087f3262SPaul Mullowney /* set the pointers */ 736087f3262SPaul Mullowney v = aa + ai[i]; 737087f3262SPaul Mullowney vj = aj + ai[i]; 738087f3262SPaul Mullowney nz = ai[i+1] - ai[i] - 1; /* exclude diag[i] */ 739087f3262SPaul Mullowney 740087f3262SPaul Mullowney /* first, set the diagonal elements */ 741087f3262SPaul Mullowney AjUp[offset] = (PetscInt) i; 74209f51544SAlejandro Lamas Daviña AAUp[offset] = (MatScalar)1.0/v[nz]; 743087f3262SPaul Mullowney AiUp[i] = offset; 74409f51544SAlejandro Lamas Daviña AALo[offset] = (MatScalar)1.0/v[nz]; 745087f3262SPaul Mullowney 746087f3262SPaul Mullowney offset+=1; 747087f3262SPaul Mullowney if (nz>0) { 748f22e0265SBarry Smith ierr = PetscArraycpy(&(AjUp[offset]), vj, nz);CHKERRQ(ierr); 749580bdb30SBarry Smith ierr = PetscArraycpy(&(AAUp[offset]), v, nz);CHKERRQ(ierr); 750087f3262SPaul Mullowney for (j=offset; j<offset+nz; j++) { 751087f3262SPaul Mullowney AAUp[j] = -AAUp[j]; 752087f3262SPaul Mullowney AALo[j] = AAUp[j]/v[nz]; 753087f3262SPaul Mullowney } 754087f3262SPaul Mullowney offset+=nz; 755087f3262SPaul Mullowney } 756087f3262SPaul Mullowney } 757087f3262SPaul Mullowney 758aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 759da79fbbcSStefano Zampini ierr = PetscNew(&upTriFactor);CHKERRQ(ierr); 760da79fbbcSStefano Zampini upTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 761087f3262SPaul Mullowney 762aa372e3fSPaul Mullowney /* Create the matrix description */ 76357d48284SJunchao Zhang stat = cusparseCreateMatDescr(&upTriFactor->descr);CHKERRCUSPARSE(stat); 76457d48284SJunchao Zhang stat = cusparseSetMatIndexBase(upTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 7651b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 766afb2bd1cSJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 767afb2bd1cSJunchao Zhang #else 76857d48284SJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 769afb2bd1cSJunchao Zhang #endif 77057d48284SJunchao Zhang stat = cusparseSetMatFillMode(upTriFactor->descr, CUSPARSE_FILL_MODE_UPPER);CHKERRCUSPARSE(stat); 77157d48284SJunchao Zhang stat = cusparseSetMatDiagType(upTriFactor->descr, CUSPARSE_DIAG_TYPE_UNIT);CHKERRCUSPARSE(stat); 772087f3262SPaul Mullowney 773aa372e3fSPaul Mullowney /* set the matrix */ 774aa372e3fSPaul Mullowney upTriFactor->csrMat = new CsrMatrix; 775aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows = A->rmap->n; 776aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols = A->cmap->n; 777aa372e3fSPaul Mullowney upTriFactor->csrMat->num_entries = a->nz; 778aa372e3fSPaul Mullowney 779aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 780aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->assign(AiUp, AiUp+A->rmap->n+1); 781aa372e3fSPaul Mullowney 782aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(a->nz); 783aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->assign(AjUp, AjUp+a->nz); 784aa372e3fSPaul Mullowney 785aa372e3fSPaul Mullowney upTriFactor->csrMat->values = new THRUSTARRAY(a->nz); 786aa372e3fSPaul Mullowney upTriFactor->csrMat->values->assign(AAUp, AAUp+a->nz); 787aa372e3fSPaul Mullowney 788afb2bd1cSJunchao Zhang /* set the operation */ 789afb2bd1cSJunchao Zhang upTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 790afb2bd1cSJunchao Zhang 791afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 792da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 793afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&upTriFactor->solveInfo);CHKERRCUSPARSE(stat); 7941b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 795afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, upTriFactor->solveOp, 796afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 797afb2bd1cSJunchao Zhang upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 798afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo, 799afb2bd1cSJunchao Zhang &upTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 800afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactor->solveBuffer,upTriFactor->solveBufferSize);CHKERRCUDA(cerr); 801afb2bd1cSJunchao Zhang #endif 802afb2bd1cSJunchao Zhang 803aa372e3fSPaul Mullowney /* perform the solve analysis */ 804aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, upTriFactor->solveOp, 805aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 806aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 807d49cd2b7SBarry Smith upTriFactor->csrMat->column_indices->data().get(), 8081b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 809d49cd2b7SBarry Smith upTriFactor->solveInfo, 810d49cd2b7SBarry Smith upTriFactor->solvePolicy, upTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 811d49cd2b7SBarry Smith #else 812d49cd2b7SBarry Smith upTriFactor->solveInfo);CHKERRCUSPARSE(stat); 813afb2bd1cSJunchao Zhang #endif 814da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 815da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 816aa372e3fSPaul Mullowney 817da79fbbcSStefano Zampini /* assign the pointer */ 818aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->upTriFactorPtr = upTriFactor; 819aa372e3fSPaul Mullowney 820aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 821da79fbbcSStefano Zampini ierr = PetscNew(&loTriFactor);CHKERRQ(ierr); 822da79fbbcSStefano Zampini loTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 823aa372e3fSPaul Mullowney 824aa372e3fSPaul Mullowney /* Create the matrix description */ 82557d48284SJunchao Zhang stat = cusparseCreateMatDescr(&loTriFactor->descr);CHKERRCUSPARSE(stat); 82657d48284SJunchao Zhang stat = cusparseSetMatIndexBase(loTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 8271b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 828afb2bd1cSJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 829afb2bd1cSJunchao Zhang #else 83057d48284SJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 831afb2bd1cSJunchao Zhang #endif 83257d48284SJunchao Zhang stat = cusparseSetMatFillMode(loTriFactor->descr, CUSPARSE_FILL_MODE_UPPER);CHKERRCUSPARSE(stat); 83357d48284SJunchao Zhang stat = cusparseSetMatDiagType(loTriFactor->descr, CUSPARSE_DIAG_TYPE_NON_UNIT);CHKERRCUSPARSE(stat); 834aa372e3fSPaul Mullowney 835aa372e3fSPaul Mullowney /* set the operation */ 836aa372e3fSPaul Mullowney loTriFactor->solveOp = CUSPARSE_OPERATION_TRANSPOSE; 837aa372e3fSPaul Mullowney 838aa372e3fSPaul Mullowney /* set the matrix */ 839aa372e3fSPaul Mullowney loTriFactor->csrMat = new CsrMatrix; 840aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows = A->rmap->n; 841aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols = A->cmap->n; 842aa372e3fSPaul Mullowney loTriFactor->csrMat->num_entries = a->nz; 843aa372e3fSPaul Mullowney 844aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 845aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->assign(AiUp, AiUp+A->rmap->n+1); 846aa372e3fSPaul Mullowney 847aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(a->nz); 848aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->assign(AjUp, AjUp+a->nz); 849aa372e3fSPaul Mullowney 850aa372e3fSPaul Mullowney loTriFactor->csrMat->values = new THRUSTARRAY(a->nz); 851aa372e3fSPaul Mullowney loTriFactor->csrMat->values->assign(AALo, AALo+a->nz); 852aa372e3fSPaul Mullowney 853afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 854da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 855afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&loTriFactor->solveInfo);CHKERRCUSPARSE(stat); 8561b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 857afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, loTriFactor->solveOp, 858afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 859afb2bd1cSJunchao Zhang loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 860afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo, 861afb2bd1cSJunchao Zhang &loTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 862afb2bd1cSJunchao Zhang cerr = cudaMalloc(&loTriFactor->solveBuffer,loTriFactor->solveBufferSize);CHKERRCUDA(cerr); 863afb2bd1cSJunchao Zhang #endif 864afb2bd1cSJunchao Zhang 865aa372e3fSPaul Mullowney /* perform the solve analysis */ 866aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, loTriFactor->solveOp, 867aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 868aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 869d49cd2b7SBarry Smith loTriFactor->csrMat->column_indices->data().get(), 8701b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 871d49cd2b7SBarry Smith loTriFactor->solveInfo, 872d49cd2b7SBarry Smith loTriFactor->solvePolicy, loTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 873d49cd2b7SBarry Smith #else 874d49cd2b7SBarry Smith loTriFactor->solveInfo);CHKERRCUSPARSE(stat); 875afb2bd1cSJunchao Zhang #endif 876da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 877da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 878aa372e3fSPaul Mullowney 879da79fbbcSStefano Zampini /* assign the pointer */ 880aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->loTriFactorPtr = loTriFactor; 881087f3262SPaul Mullowney 882da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(2*(((A->rmap->n+1)+(a->nz))*sizeof(int)+(a->nz)*sizeof(PetscScalar)));CHKERRQ(ierr); 88357d48284SJunchao Zhang cerr = cudaFreeHost(AiUp);CHKERRCUDA(cerr); 88457d48284SJunchao Zhang cerr = cudaFreeHost(AjUp);CHKERRCUDA(cerr); 885da79fbbcSStefano Zampini } else { 886da79fbbcSStefano Zampini /* Fill the upper triangular matrix */ 887da79fbbcSStefano Zampini offset = 0; 888da79fbbcSStefano Zampini for (i=0; i<n; i++) { 889da79fbbcSStefano Zampini /* set the pointers */ 890da79fbbcSStefano Zampini v = aa + ai[i]; 891da79fbbcSStefano Zampini nz = ai[i+1] - ai[i] - 1; /* exclude diag[i] */ 892da79fbbcSStefano Zampini 893da79fbbcSStefano Zampini /* first, set the diagonal elements */ 894da79fbbcSStefano Zampini AAUp[offset] = 1.0/v[nz]; 895da79fbbcSStefano Zampini AALo[offset] = 1.0/v[nz]; 896da79fbbcSStefano Zampini 897da79fbbcSStefano Zampini offset+=1; 898da79fbbcSStefano Zampini if (nz>0) { 899da79fbbcSStefano Zampini ierr = PetscArraycpy(&(AAUp[offset]), v, nz);CHKERRQ(ierr); 900da79fbbcSStefano Zampini for (j=offset; j<offset+nz; j++) { 901da79fbbcSStefano Zampini AAUp[j] = -AAUp[j]; 902da79fbbcSStefano Zampini AALo[j] = AAUp[j]/v[nz]; 903da79fbbcSStefano Zampini } 904da79fbbcSStefano Zampini offset+=nz; 905da79fbbcSStefano Zampini } 906da79fbbcSStefano Zampini } 907da79fbbcSStefano Zampini if (!upTriFactor) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 908da79fbbcSStefano Zampini if (!loTriFactor) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 909da79fbbcSStefano Zampini upTriFactor->csrMat->values->assign(AAUp, AAUp+a->nz); 910da79fbbcSStefano Zampini loTriFactor->csrMat->values->assign(AALo, AALo+a->nz); 911da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(2*(a->nz)*sizeof(PetscScalar));CHKERRQ(ierr); 912da79fbbcSStefano Zampini } 91357d48284SJunchao Zhang cerr = cudaFreeHost(AAUp);CHKERRCUDA(cerr); 91457d48284SJunchao Zhang cerr = cudaFreeHost(AALo);CHKERRCUDA(cerr); 915087f3262SPaul Mullowney } catch(char *ex) { 916087f3262SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 917087f3262SPaul Mullowney } 918087f3262SPaul Mullowney } 919087f3262SPaul Mullowney PetscFunctionReturn(0); 920087f3262SPaul Mullowney } 921087f3262SPaul Mullowney 922087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEICCAnalysisAndCopyToGPU(Mat A) 9239ae82921SPaul Mullowney { 9249ae82921SPaul Mullowney PetscErrorCode ierr; 925087f3262SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 926087f3262SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 927087f3262SPaul Mullowney IS ip = a->row; 928087f3262SPaul Mullowney PetscBool perm_identity; 929087f3262SPaul Mullowney PetscInt n = A->rmap->n; 930087f3262SPaul Mullowney 931087f3262SPaul Mullowney PetscFunctionBegin; 932da79fbbcSStefano Zampini if (!cusparseTriFactors) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 933087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEBuildICCTriMatrices(A);CHKERRQ(ierr); 934da79fbbcSStefano Zampini if (!cusparseTriFactors->workVector) { cusparseTriFactors->workVector = new THRUSTARRAY(n); } 935aa372e3fSPaul Mullowney cusparseTriFactors->nnz=(a->nz-n)*2 + n; 936aa372e3fSPaul Mullowney 937da79fbbcSStefano Zampini A->offloadmask = PETSC_OFFLOAD_BOTH; 938da79fbbcSStefano Zampini 939087f3262SPaul Mullowney /* lower triangular indices */ 940087f3262SPaul Mullowney ierr = ISIdentity(ip,&perm_identity);CHKERRQ(ierr); 941087f3262SPaul Mullowney if (!perm_identity) { 9424e4bbfaaSStefano Zampini IS iip; 943da79fbbcSStefano Zampini const PetscInt *irip,*rip; 9444e4bbfaaSStefano Zampini 9454e4bbfaaSStefano Zampini ierr = ISInvertPermutation(ip,PETSC_DECIDE,&iip);CHKERRQ(ierr); 9464e4bbfaaSStefano Zampini ierr = ISGetIndices(iip,&irip);CHKERRQ(ierr); 947da79fbbcSStefano Zampini ierr = ISGetIndices(ip,&rip);CHKERRQ(ierr); 948aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices = new THRUSTINTARRAY(n); 949aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices->assign(rip, rip+n); 950aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices = new THRUSTINTARRAY(n); 9514e4bbfaaSStefano Zampini cusparseTriFactors->cpermIndices->assign(irip, irip+n); 9524e4bbfaaSStefano Zampini ierr = ISRestoreIndices(iip,&irip);CHKERRQ(ierr); 9534e4bbfaaSStefano Zampini ierr = ISDestroy(&iip);CHKERRQ(ierr); 954087f3262SPaul Mullowney ierr = ISRestoreIndices(ip,&rip);CHKERRQ(ierr); 955da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(2.*n*sizeof(PetscInt));CHKERRQ(ierr); 956da79fbbcSStefano Zampini } 957087f3262SPaul Mullowney PetscFunctionReturn(0); 958087f3262SPaul Mullowney } 959087f3262SPaul Mullowney 960087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorNumeric_SeqAIJCUSPARSE(Mat B,Mat A,const MatFactorInfo *info) 961087f3262SPaul Mullowney { 962087f3262SPaul Mullowney Mat_SeqAIJ *b = (Mat_SeqAIJ*)B->data; 963087f3262SPaul Mullowney IS ip = b->row; 964087f3262SPaul Mullowney PetscBool perm_identity; 965b175d8bbSPaul Mullowney PetscErrorCode ierr; 966087f3262SPaul Mullowney 967087f3262SPaul Mullowney PetscFunctionBegin; 96857181aedSStefano Zampini ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 969087f3262SPaul Mullowney ierr = MatCholeskyFactorNumeric_SeqAIJ(B,A,info);CHKERRQ(ierr); 970ccdfe979SStefano Zampini B->offloadmask = PETSC_OFFLOAD_CPU; 971087f3262SPaul Mullowney /* determine which version of MatSolve needs to be used. */ 972087f3262SPaul Mullowney ierr = ISIdentity(ip,&perm_identity);CHKERRQ(ierr); 973087f3262SPaul Mullowney if (perm_identity) { 974087f3262SPaul Mullowney B->ops->solve = MatSolve_SeqAIJCUSPARSE_NaturalOrdering; 975087f3262SPaul Mullowney B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering; 9764e4bbfaaSStefano Zampini B->ops->matsolve = NULL; 9774e4bbfaaSStefano Zampini B->ops->matsolvetranspose = NULL; 978087f3262SPaul Mullowney } else { 979087f3262SPaul Mullowney B->ops->solve = MatSolve_SeqAIJCUSPARSE; 980087f3262SPaul Mullowney B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE; 9814e4bbfaaSStefano Zampini B->ops->matsolve = NULL; 9824e4bbfaaSStefano Zampini B->ops->matsolvetranspose = NULL; 983087f3262SPaul Mullowney } 984087f3262SPaul Mullowney 985087f3262SPaul Mullowney /* get the triangular factors */ 986087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEICCAnalysisAndCopyToGPU(B);CHKERRQ(ierr); 987087f3262SPaul Mullowney PetscFunctionReturn(0); 988087f3262SPaul Mullowney } 9899ae82921SPaul Mullowney 990b175d8bbSPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(Mat A) 991bda325fcSPaul Mullowney { 992bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 993aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 994aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 995da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT; 996da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT; 997bda325fcSPaul Mullowney cusparseStatus_t stat; 998aa372e3fSPaul Mullowney cusparseIndexBase_t indexBase; 999aa372e3fSPaul Mullowney cusparseMatrixType_t matrixType; 1000aa372e3fSPaul Mullowney cusparseFillMode_t fillMode; 1001aa372e3fSPaul Mullowney cusparseDiagType_t diagType; 10021b0a6780SStefano Zampini cudaError_t cerr; 1003da79fbbcSStefano Zampini PetscErrorCode ierr; 1004b175d8bbSPaul Mullowney 1005bda325fcSPaul Mullowney PetscFunctionBegin; 1006aa372e3fSPaul Mullowney /* allocate space for the transpose of the lower triangular factor */ 1007da79fbbcSStefano Zampini ierr = PetscNew(&loTriFactorT);CHKERRQ(ierr); 1008da79fbbcSStefano Zampini loTriFactorT->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 1009aa372e3fSPaul Mullowney 1010aa372e3fSPaul Mullowney /* set the matrix descriptors of the lower triangular factor */ 1011aa372e3fSPaul Mullowney matrixType = cusparseGetMatType(loTriFactor->descr); 1012aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(loTriFactor->descr); 1013aa372e3fSPaul Mullowney fillMode = cusparseGetMatFillMode(loTriFactor->descr)==CUSPARSE_FILL_MODE_UPPER ? 1014aa372e3fSPaul Mullowney CUSPARSE_FILL_MODE_LOWER : CUSPARSE_FILL_MODE_UPPER; 1015aa372e3fSPaul Mullowney diagType = cusparseGetMatDiagType(loTriFactor->descr); 1016aa372e3fSPaul Mullowney 1017aa372e3fSPaul Mullowney /* Create the matrix description */ 101857d48284SJunchao Zhang stat = cusparseCreateMatDescr(&loTriFactorT->descr);CHKERRCUSPARSE(stat); 101957d48284SJunchao Zhang stat = cusparseSetMatIndexBase(loTriFactorT->descr, indexBase);CHKERRCUSPARSE(stat); 102057d48284SJunchao Zhang stat = cusparseSetMatType(loTriFactorT->descr, matrixType);CHKERRCUSPARSE(stat); 102157d48284SJunchao Zhang stat = cusparseSetMatFillMode(loTriFactorT->descr, fillMode);CHKERRCUSPARSE(stat); 102257d48284SJunchao Zhang stat = cusparseSetMatDiagType(loTriFactorT->descr, diagType);CHKERRCUSPARSE(stat); 1023aa372e3fSPaul Mullowney 1024aa372e3fSPaul Mullowney /* set the operation */ 1025aa372e3fSPaul Mullowney loTriFactorT->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 1026aa372e3fSPaul Mullowney 1027aa372e3fSPaul Mullowney /* allocate GPU space for the CSC of the lower triangular factor*/ 1028aa372e3fSPaul Mullowney loTriFactorT->csrMat = new CsrMatrix; 1029afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows = loTriFactor->csrMat->num_cols; 1030afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_cols = loTriFactor->csrMat->num_rows; 1031aa372e3fSPaul Mullowney loTriFactorT->csrMat->num_entries = loTriFactor->csrMat->num_entries; 1032afb2bd1cSJunchao Zhang loTriFactorT->csrMat->row_offsets = new THRUSTINTARRAY32(loTriFactorT->csrMat->num_rows+1); 1033afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices = new THRUSTINTARRAY32(loTriFactorT->csrMat->num_entries); 1034afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values = new THRUSTARRAY(loTriFactorT->csrMat->num_entries); 1035aa372e3fSPaul Mullowney 1036aa372e3fSPaul Mullowney /* compute the transpose of the lower triangular factor, i.e. the CSC */ 1037afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1038afb2bd1cSJunchao Zhang stat = cusparseCsr2cscEx2_bufferSize(cusparseTriFactors->handle, loTriFactor->csrMat->num_rows, 1039afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_cols, loTriFactor->csrMat->num_entries, 1040afb2bd1cSJunchao Zhang loTriFactor->csrMat->values->data().get(), 1041afb2bd1cSJunchao Zhang loTriFactor->csrMat->row_offsets->data().get(), 1042afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), 1043afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values->data().get(), 1044afb2bd1cSJunchao Zhang loTriFactorT->csrMat->row_offsets->data().get(), loTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1045afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC,indexBase, 1046afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG1, &loTriFactor->csr2cscBufferSize);CHKERRCUSPARSE(stat); 10471b0a6780SStefano Zampini cerr = cudaMalloc(&loTriFactor->csr2cscBuffer,loTriFactor->csr2cscBufferSize);CHKERRCUDA(cerr); 1048afb2bd1cSJunchao Zhang #endif 1049afb2bd1cSJunchao Zhang 1050da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1051aa372e3fSPaul Mullowney stat = cusparse_csr2csc(cusparseTriFactors->handle, loTriFactor->csrMat->num_rows, 1052aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols, loTriFactor->csrMat->num_entries, 1053aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), 1054aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->data().get(), 1055aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->data().get(), 1056aa372e3fSPaul Mullowney loTriFactorT->csrMat->values->data().get(), 1057afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1058afb2bd1cSJunchao Zhang loTriFactorT->csrMat->row_offsets->data().get(), loTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1059afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase, 1060d49cd2b7SBarry Smith CUSPARSE_CSR2CSC_ALG1, loTriFactor->csr2cscBuffer);CHKERRCUSPARSE(stat); 1061afb2bd1cSJunchao Zhang #else 1062afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), 1063d49cd2b7SBarry Smith CUSPARSE_ACTION_NUMERIC, indexBase);CHKERRCUSPARSE(stat); 1064afb2bd1cSJunchao Zhang #endif 1065da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1066da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1067aa372e3fSPaul Mullowney 1068afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 1069da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1070afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&loTriFactorT->solveInfo);CHKERRCUSPARSE(stat); 10711b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1072afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, loTriFactorT->solveOp, 1073afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, loTriFactorT->csrMat->num_entries, loTriFactorT->descr, 1074afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), 1075afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices->data().get(), loTriFactorT->solveInfo, 1076afb2bd1cSJunchao Zhang &loTriFactorT->solveBufferSize);CHKERRCUSPARSE(stat); 1077afb2bd1cSJunchao Zhang cerr = cudaMalloc(&loTriFactorT->solveBuffer,loTriFactorT->solveBufferSize);CHKERRCUDA(cerr); 1078afb2bd1cSJunchao Zhang #endif 1079afb2bd1cSJunchao Zhang 1080afb2bd1cSJunchao Zhang /* perform the solve analysis */ 1081aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, loTriFactorT->solveOp, 1082afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, loTriFactorT->csrMat->num_entries, loTriFactorT->descr, 1083afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), 1084d49cd2b7SBarry Smith loTriFactorT->csrMat->column_indices->data().get(), 10851b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1086d49cd2b7SBarry Smith loTriFactorT->solveInfo, 1087d49cd2b7SBarry Smith loTriFactorT->solvePolicy, loTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1088d49cd2b7SBarry Smith #else 1089d49cd2b7SBarry Smith loTriFactorT->solveInfo);CHKERRCUSPARSE(stat); 1090afb2bd1cSJunchao Zhang #endif 1091da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1092da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1093aa372e3fSPaul Mullowney 1094da79fbbcSStefano Zampini /* assign the pointer */ 1095aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->loTriFactorPtrTranspose = loTriFactorT; 1096aa372e3fSPaul Mullowney 1097aa372e3fSPaul Mullowney /*********************************************/ 1098aa372e3fSPaul Mullowney /* Now the Transpose of the Upper Tri Factor */ 1099aa372e3fSPaul Mullowney /*********************************************/ 1100aa372e3fSPaul Mullowney 1101aa372e3fSPaul Mullowney /* allocate space for the transpose of the upper triangular factor */ 1102da79fbbcSStefano Zampini ierr = PetscNew(&upTriFactorT);CHKERRQ(ierr); 1103da79fbbcSStefano Zampini upTriFactorT->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 1104aa372e3fSPaul Mullowney 1105aa372e3fSPaul Mullowney /* set the matrix descriptors of the upper triangular factor */ 1106aa372e3fSPaul Mullowney matrixType = cusparseGetMatType(upTriFactor->descr); 1107aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(upTriFactor->descr); 1108aa372e3fSPaul Mullowney fillMode = cusparseGetMatFillMode(upTriFactor->descr)==CUSPARSE_FILL_MODE_UPPER ? 1109aa372e3fSPaul Mullowney CUSPARSE_FILL_MODE_LOWER : CUSPARSE_FILL_MODE_UPPER; 1110aa372e3fSPaul Mullowney diagType = cusparseGetMatDiagType(upTriFactor->descr); 1111aa372e3fSPaul Mullowney 1112aa372e3fSPaul Mullowney /* Create the matrix description */ 111357d48284SJunchao Zhang stat = cusparseCreateMatDescr(&upTriFactorT->descr);CHKERRCUSPARSE(stat); 111457d48284SJunchao Zhang stat = cusparseSetMatIndexBase(upTriFactorT->descr, indexBase);CHKERRCUSPARSE(stat); 111557d48284SJunchao Zhang stat = cusparseSetMatType(upTriFactorT->descr, matrixType);CHKERRCUSPARSE(stat); 111657d48284SJunchao Zhang stat = cusparseSetMatFillMode(upTriFactorT->descr, fillMode);CHKERRCUSPARSE(stat); 111757d48284SJunchao Zhang stat = cusparseSetMatDiagType(upTriFactorT->descr, diagType);CHKERRCUSPARSE(stat); 1118aa372e3fSPaul Mullowney 1119aa372e3fSPaul Mullowney /* set the operation */ 1120aa372e3fSPaul Mullowney upTriFactorT->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 1121aa372e3fSPaul Mullowney 1122aa372e3fSPaul Mullowney /* allocate GPU space for the CSC of the upper triangular factor*/ 1123aa372e3fSPaul Mullowney upTriFactorT->csrMat = new CsrMatrix; 1124afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows = upTriFactor->csrMat->num_cols; 1125afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_cols = upTriFactor->csrMat->num_rows; 1126aa372e3fSPaul Mullowney upTriFactorT->csrMat->num_entries = upTriFactor->csrMat->num_entries; 1127afb2bd1cSJunchao Zhang upTriFactorT->csrMat->row_offsets = new THRUSTINTARRAY32(upTriFactorT->csrMat->num_rows+1); 1128afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices = new THRUSTINTARRAY32(upTriFactorT->csrMat->num_entries); 1129afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values = new THRUSTARRAY(upTriFactorT->csrMat->num_entries); 1130aa372e3fSPaul Mullowney 1131aa372e3fSPaul Mullowney /* compute the transpose of the upper triangular factor, i.e. the CSC */ 1132afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1133afb2bd1cSJunchao Zhang stat = cusparseCsr2cscEx2_bufferSize(cusparseTriFactors->handle,upTriFactor->csrMat->num_rows, 1134afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_cols, upTriFactor->csrMat->num_entries, 1135afb2bd1cSJunchao Zhang upTriFactor->csrMat->values->data().get(), 1136afb2bd1cSJunchao Zhang upTriFactor->csrMat->row_offsets->data().get(), 1137afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), 1138afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values->data().get(), 1139afb2bd1cSJunchao Zhang upTriFactorT->csrMat->row_offsets->data().get(), upTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1140afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC,indexBase, 1141afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG1, &upTriFactor->csr2cscBufferSize);CHKERRCUSPARSE(stat); 1142afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactor->csr2cscBuffer,upTriFactor->csr2cscBufferSize);CHKERRCUDA(cerr); 1143afb2bd1cSJunchao Zhang #endif 1144afb2bd1cSJunchao Zhang 1145da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1146aa372e3fSPaul Mullowney stat = cusparse_csr2csc(cusparseTriFactors->handle, upTriFactor->csrMat->num_rows, 1147aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols, upTriFactor->csrMat->num_entries, 1148aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), 1149aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->data().get(), 1150aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->data().get(), 1151aa372e3fSPaul Mullowney upTriFactorT->csrMat->values->data().get(), 1152afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1153afb2bd1cSJunchao Zhang upTriFactorT->csrMat->row_offsets->data().get(), upTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1154afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase, 1155d49cd2b7SBarry Smith CUSPARSE_CSR2CSC_ALG1, upTriFactor->csr2cscBuffer);CHKERRCUSPARSE(stat); 1156afb2bd1cSJunchao Zhang #else 1157afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), 1158d49cd2b7SBarry Smith CUSPARSE_ACTION_NUMERIC, indexBase);CHKERRCUSPARSE(stat); 1159afb2bd1cSJunchao Zhang #endif 1160d49cd2b7SBarry Smith 1161da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1162da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1163aa372e3fSPaul Mullowney 1164afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 1165da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1166afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&upTriFactorT->solveInfo);CHKERRCUSPARSE(stat); 11671b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1168afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, upTriFactorT->solveOp, 1169afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, upTriFactorT->csrMat->num_entries, upTriFactorT->descr, 1170afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), 1171afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices->data().get(), upTriFactorT->solveInfo, 1172afb2bd1cSJunchao Zhang &upTriFactorT->solveBufferSize);CHKERRCUSPARSE(stat); 1173afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactorT->solveBuffer,upTriFactorT->solveBufferSize);CHKERRCUDA(cerr); 1174afb2bd1cSJunchao Zhang #endif 1175afb2bd1cSJunchao Zhang 1176afb2bd1cSJunchao Zhang /* perform the solve analysis */ 1177aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, upTriFactorT->solveOp, 1178afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, upTriFactorT->csrMat->num_entries, upTriFactorT->descr, 1179afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), 1180d49cd2b7SBarry Smith upTriFactorT->csrMat->column_indices->data().get(), 11811b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1182d49cd2b7SBarry Smith upTriFactorT->solveInfo, 1183d49cd2b7SBarry Smith upTriFactorT->solvePolicy, upTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1184d49cd2b7SBarry Smith #else 1185d49cd2b7SBarry Smith upTriFactorT->solveInfo);CHKERRCUSPARSE(stat); 1186afb2bd1cSJunchao Zhang #endif 1187d49cd2b7SBarry Smith 1188da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1189da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1190aa372e3fSPaul Mullowney 1191da79fbbcSStefano Zampini /* assign the pointer */ 1192aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->upTriFactorPtrTranspose = upTriFactorT; 1193bda325fcSPaul Mullowney PetscFunctionReturn(0); 1194bda325fcSPaul Mullowney } 1195bda325fcSPaul Mullowney 1196a49f1ed0SStefano Zampini struct PetscScalarToPetscInt 1197a49f1ed0SStefano Zampini { 1198a49f1ed0SStefano Zampini __host__ __device__ 1199a49f1ed0SStefano Zampini PetscInt operator()(PetscScalar s) 1200a49f1ed0SStefano Zampini { 1201a49f1ed0SStefano Zampini return (PetscInt)PetscRealPart(s); 1202a49f1ed0SStefano Zampini } 1203a49f1ed0SStefano Zampini }; 1204a49f1ed0SStefano Zampini 12051a2c6b5cSJunchao Zhang static PetscErrorCode MatSeqAIJCUSPARSEFormExplicitTransposeForMult(Mat A) 1206bda325fcSPaul Mullowney { 1207aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 1208a49f1ed0SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *matstruct, *matstructT; 1209bda325fcSPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 1210bda325fcSPaul Mullowney cusparseStatus_t stat; 1211aa372e3fSPaul Mullowney cusparseIndexBase_t indexBase; 1212b06137fdSPaul Mullowney cudaError_t err; 121385ba7357SStefano Zampini PetscErrorCode ierr; 1214b175d8bbSPaul Mullowney 1215bda325fcSPaul Mullowney PetscFunctionBegin; 12161a2c6b5cSJunchao Zhang if (!A->form_explicit_transpose || !A->rmap->n || !A->cmap->n) PetscFunctionReturn(0); 1217a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 1218a49f1ed0SStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->mat; 1219e8d2b73aSMark Adams if (!matstruct) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing mat struct"); 1220a49f1ed0SStefano Zampini matstructT = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->matTranspose; 1221e8d2b73aSMark Adams if (A->transupdated && !matstructT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing matTranspose struct"); 12221a2c6b5cSJunchao Zhang if (A->transupdated) PetscFunctionReturn(0); 122385ba7357SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1224ee7b52eaSHong Zhang ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1225a49f1ed0SStefano Zampini if (cusparsestruct->format != MAT_CUSPARSE_CSR) { 1226a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr); 1227a49f1ed0SStefano Zampini } 1228a49f1ed0SStefano Zampini if (!cusparsestruct->matTranspose) { /* create cusparse matrix */ 1229aa372e3fSPaul Mullowney matstructT = new Mat_SeqAIJCUSPARSEMultStruct; 123057d48284SJunchao Zhang stat = cusparseCreateMatDescr(&matstructT->descr);CHKERRCUSPARSE(stat); 1231aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(matstruct->descr); 123257d48284SJunchao Zhang stat = cusparseSetMatIndexBase(matstructT->descr, indexBase);CHKERRCUSPARSE(stat); 123357d48284SJunchao Zhang stat = cusparseSetMatType(matstructT->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 1234aa372e3fSPaul Mullowney 1235b06137fdSPaul Mullowney /* set alpha and beta */ 1236afb2bd1cSJunchao Zhang err = cudaMalloc((void **)&(matstructT->alpha_one),sizeof(PetscScalar));CHKERRCUDA(err); 12377656d835SStefano Zampini err = cudaMalloc((void **)&(matstructT->beta_zero),sizeof(PetscScalar));CHKERRCUDA(err); 12387656d835SStefano Zampini err = cudaMalloc((void **)&(matstructT->beta_one), sizeof(PetscScalar));CHKERRCUDA(err); 1239afb2bd1cSJunchao Zhang err = cudaMemcpy(matstructT->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 12407656d835SStefano Zampini err = cudaMemcpy(matstructT->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 12417656d835SStefano Zampini err = cudaMemcpy(matstructT->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 1242b06137fdSPaul Mullowney 1243aa372e3fSPaul Mullowney if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 1244aa372e3fSPaul Mullowney CsrMatrix *matrixT = new CsrMatrix; 1245a49f1ed0SStefano Zampini matstructT->mat = matrixT; 1246554b8892SKarl Rupp matrixT->num_rows = A->cmap->n; 1247554b8892SKarl Rupp matrixT->num_cols = A->rmap->n; 1248aa372e3fSPaul Mullowney matrixT->num_entries = a->nz; 1249a8bd5306SMark Adams matrixT->row_offsets = new THRUSTINTARRAY32(matrixT->num_rows+1); 1250aa372e3fSPaul Mullowney matrixT->column_indices = new THRUSTINTARRAY32(a->nz); 1251aa372e3fSPaul Mullowney matrixT->values = new THRUSTARRAY(a->nz); 1252a3fdcf43SKarl Rupp 1253039c6fbaSStefano Zampini if (!cusparsestruct->rowoffsets_gpu) { cusparsestruct->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n+1); } 125481902715SJunchao Zhang cusparsestruct->rowoffsets_gpu->assign(a->i,a->i+A->rmap->n+1); 1255afb2bd1cSJunchao Zhang 1256afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1257afb2bd1cSJunchao Zhang stat = cusparseCreateCsr(&matstructT->matDescr, 1258afb2bd1cSJunchao Zhang matrixT->num_rows, matrixT->num_cols, matrixT->num_entries, 1259afb2bd1cSJunchao Zhang matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), 1260afb2bd1cSJunchao Zhang matrixT->values->data().get(), 1261afb2bd1cSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, /* row offset, col idx type due to THRUSTINTARRAY32 */ 1262afb2bd1cSJunchao Zhang indexBase,cusparse_scalartype);CHKERRCUSPARSE(stat); 1263afb2bd1cSJunchao Zhang #endif 1264aa372e3fSPaul Mullowney } else if (cusparsestruct->format == MAT_CUSPARSE_ELL || cusparsestruct->format == MAT_CUSPARSE_HYB) { 1265afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1266afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 1267afb2bd1cSJunchao Zhang #else 1268aa372e3fSPaul Mullowney CsrMatrix *temp = new CsrMatrix; 126951c6d536SStefano Zampini CsrMatrix *tempT = new CsrMatrix; 127051c6d536SStefano Zampini /* First convert HYB to CSR */ 1271aa372e3fSPaul Mullowney temp->num_rows = A->rmap->n; 1272aa372e3fSPaul Mullowney temp->num_cols = A->cmap->n; 1273aa372e3fSPaul Mullowney temp->num_entries = a->nz; 1274aa372e3fSPaul Mullowney temp->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 1275aa372e3fSPaul Mullowney temp->column_indices = new THRUSTINTARRAY32(a->nz); 1276aa372e3fSPaul Mullowney temp->values = new THRUSTARRAY(a->nz); 1277aa372e3fSPaul Mullowney 1278aa372e3fSPaul Mullowney stat = cusparse_hyb2csr(cusparsestruct->handle, 1279aa372e3fSPaul Mullowney matstruct->descr, (cusparseHybMat_t)matstruct->mat, 1280aa372e3fSPaul Mullowney temp->values->data().get(), 1281aa372e3fSPaul Mullowney temp->row_offsets->data().get(), 128257d48284SJunchao Zhang temp->column_indices->data().get());CHKERRCUSPARSE(stat); 1283aa372e3fSPaul Mullowney 1284aa372e3fSPaul Mullowney /* Next, convert CSR to CSC (i.e. the matrix transpose) */ 1285aa372e3fSPaul Mullowney tempT->num_rows = A->rmap->n; 1286aa372e3fSPaul Mullowney tempT->num_cols = A->cmap->n; 1287aa372e3fSPaul Mullowney tempT->num_entries = a->nz; 1288aa372e3fSPaul Mullowney tempT->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 1289aa372e3fSPaul Mullowney tempT->column_indices = new THRUSTINTARRAY32(a->nz); 1290aa372e3fSPaul Mullowney tempT->values = new THRUSTARRAY(a->nz); 1291aa372e3fSPaul Mullowney 1292aa372e3fSPaul Mullowney stat = cusparse_csr2csc(cusparsestruct->handle, temp->num_rows, 1293aa372e3fSPaul Mullowney temp->num_cols, temp->num_entries, 1294aa372e3fSPaul Mullowney temp->values->data().get(), 1295aa372e3fSPaul Mullowney temp->row_offsets->data().get(), 1296aa372e3fSPaul Mullowney temp->column_indices->data().get(), 1297aa372e3fSPaul Mullowney tempT->values->data().get(), 1298aa372e3fSPaul Mullowney tempT->column_indices->data().get(), 1299aa372e3fSPaul Mullowney tempT->row_offsets->data().get(), 130057d48284SJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase);CHKERRCUSPARSE(stat); 1301aa372e3fSPaul Mullowney 1302aa372e3fSPaul Mullowney /* Last, convert CSC to HYB */ 1303aa372e3fSPaul Mullowney cusparseHybMat_t hybMat; 130457d48284SJunchao Zhang stat = cusparseCreateHybMat(&hybMat);CHKERRCUSPARSE(stat); 1305aa372e3fSPaul Mullowney cusparseHybPartition_t partition = cusparsestruct->format==MAT_CUSPARSE_ELL ? 1306aa372e3fSPaul Mullowney CUSPARSE_HYB_PARTITION_MAX : CUSPARSE_HYB_PARTITION_AUTO; 1307aa372e3fSPaul Mullowney stat = cusparse_csr2hyb(cusparsestruct->handle, A->rmap->n, A->cmap->n, 1308aa372e3fSPaul Mullowney matstructT->descr, tempT->values->data().get(), 1309aa372e3fSPaul Mullowney tempT->row_offsets->data().get(), 1310aa372e3fSPaul Mullowney tempT->column_indices->data().get(), 131157d48284SJunchao Zhang hybMat, 0, partition);CHKERRCUSPARSE(stat); 1312aa372e3fSPaul Mullowney 1313aa372e3fSPaul Mullowney /* assign the pointer */ 1314aa372e3fSPaul Mullowney matstructT->mat = hybMat; 13151a2c6b5cSJunchao Zhang A->transupdated = PETSC_TRUE; 1316aa372e3fSPaul Mullowney /* delete temporaries */ 1317aa372e3fSPaul Mullowney if (tempT) { 1318aa372e3fSPaul Mullowney if (tempT->values) delete (THRUSTARRAY*) tempT->values; 1319aa372e3fSPaul Mullowney if (tempT->column_indices) delete (THRUSTINTARRAY32*) tempT->column_indices; 1320aa372e3fSPaul Mullowney if (tempT->row_offsets) delete (THRUSTINTARRAY32*) tempT->row_offsets; 1321aa372e3fSPaul Mullowney delete (CsrMatrix*) tempT; 1322087f3262SPaul Mullowney } 1323aa372e3fSPaul Mullowney if (temp) { 1324aa372e3fSPaul Mullowney if (temp->values) delete (THRUSTARRAY*) temp->values; 1325aa372e3fSPaul Mullowney if (temp->column_indices) delete (THRUSTINTARRAY32*) temp->column_indices; 1326aa372e3fSPaul Mullowney if (temp->row_offsets) delete (THRUSTINTARRAY32*) temp->row_offsets; 1327aa372e3fSPaul Mullowney delete (CsrMatrix*) temp; 1328aa372e3fSPaul Mullowney } 1329afb2bd1cSJunchao Zhang #endif 1330aa372e3fSPaul Mullowney } 1331a49f1ed0SStefano Zampini } 1332a49f1ed0SStefano Zampini if (cusparsestruct->format == MAT_CUSPARSE_CSR) { /* transpose mat struct may be already present, update data */ 1333a49f1ed0SStefano Zampini CsrMatrix *matrix = (CsrMatrix*)matstruct->mat; 1334a49f1ed0SStefano Zampini CsrMatrix *matrixT = (CsrMatrix*)matstructT->mat; 1335e8d2b73aSMark Adams if (!matrix) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix"); 1336e8d2b73aSMark Adams if (!matrix->row_offsets) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix rows"); 1337e8d2b73aSMark Adams if (!matrix->column_indices) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix cols"); 1338e8d2b73aSMark Adams if (!matrix->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix values"); 1339e8d2b73aSMark Adams if (!matrixT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT"); 1340e8d2b73aSMark Adams if (!matrixT->row_offsets) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT rows"); 1341e8d2b73aSMark Adams if (!matrixT->column_indices) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT cols"); 1342e8d2b73aSMark Adams if (!matrixT->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT values"); 1343a49f1ed0SStefano Zampini if (!cusparsestruct->rowoffsets_gpu) { /* this may be absent when we did not construct the transpose with csr2csc */ 1344a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n + 1); 1345a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu->assign(a->i,a->i + A->rmap->n + 1); 1346a49f1ed0SStefano Zampini ierr = PetscLogCpuToGpu((A->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 1347a49f1ed0SStefano Zampini } 1348a49f1ed0SStefano Zampini if (!cusparsestruct->csr2csc_i) { 1349a49f1ed0SStefano Zampini THRUSTARRAY csr2csc_a(matrix->num_entries); 1350a49f1ed0SStefano Zampini PetscStackCallThrust(thrust::sequence(thrust::device, csr2csc_a.begin(), csr2csc_a.end(), 0.0)); 1351a49f1ed0SStefano Zampini 1352a49f1ed0SStefano Zampini indexBase = cusparseGetMatIndexBase(matstruct->descr); 1353a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1354a49f1ed0SStefano Zampini void *csr2cscBuffer; 1355a49f1ed0SStefano Zampini size_t csr2cscBufferSize; 1356a49f1ed0SStefano Zampini stat = cusparseCsr2cscEx2_bufferSize(cusparsestruct->handle, A->rmap->n, 1357a49f1ed0SStefano Zampini A->cmap->n, matrix->num_entries, 1358a49f1ed0SStefano Zampini matrix->values->data().get(), 1359a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu->data().get(), 1360a49f1ed0SStefano Zampini matrix->column_indices->data().get(), 1361a49f1ed0SStefano Zampini matrixT->values->data().get(), 1362a49f1ed0SStefano Zampini matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), cusparse_scalartype, 1363a49f1ed0SStefano Zampini CUSPARSE_ACTION_NUMERIC,indexBase, 1364a49f1ed0SStefano Zampini cusparsestruct->csr2cscAlg, &csr2cscBufferSize);CHKERRCUSPARSE(stat); 1365a49f1ed0SStefano Zampini err = cudaMalloc(&csr2cscBuffer,csr2cscBufferSize);CHKERRCUDA(err); 1366a49f1ed0SStefano Zampini #endif 1367a49f1ed0SStefano Zampini 13681a2c6b5cSJunchao Zhang if (matrix->num_entries) { 13691a2c6b5cSJunchao Zhang /* When there are no nonzeros, this routine mistakenly returns CUSPARSE_STATUS_INVALID_VALUE in 13701a2c6b5cSJunchao Zhang mat_tests-ex62_15_mpiaijcusparse on ranks 0 and 2 with CUDA-11. But CUDA-10 is OK. 13711a2c6b5cSJunchao Zhang I checked every parameters and they were just fine. I have no clue why cusparse complains. 13721a2c6b5cSJunchao Zhang 13731a2c6b5cSJunchao Zhang Per https://docs.nvidia.com/cuda/cusparse/index.html#csr2cscEx2, when nnz = 0, matrixT->row_offsets[] 13741a2c6b5cSJunchao Zhang should be filled with indexBase. So I just take a shortcut here. 13751a2c6b5cSJunchao Zhang */ 13761a2c6b5cSJunchao Zhang stat = cusparse_csr2csc(cusparsestruct->handle, A->rmap->n, 13771a2c6b5cSJunchao Zhang A->cmap->n,matrix->num_entries, 13781a2c6b5cSJunchao Zhang csr2csc_a.data().get(), 13791a2c6b5cSJunchao Zhang cusparsestruct->rowoffsets_gpu->data().get(), 13801a2c6b5cSJunchao Zhang matrix->column_indices->data().get(), 1381a49f1ed0SStefano Zampini matrixT->values->data().get(), 1382a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1383a49f1ed0SStefano Zampini matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), cusparse_scalartype, 1384a49f1ed0SStefano Zampini CUSPARSE_ACTION_NUMERIC,indexBase, 13851a2c6b5cSJunchao Zhang cusparsestruct->csr2cscAlg, csr2cscBuffer);CHKERRCUSPARSE(stat); 1386a49f1ed0SStefano Zampini #else 1387a49f1ed0SStefano Zampini matrixT->column_indices->data().get(), matrixT->row_offsets->data().get(), 13881a2c6b5cSJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase);CHKERRCUSPARSE(stat); 1389a49f1ed0SStefano Zampini #endif 13901a2c6b5cSJunchao Zhang } else { 13911a2c6b5cSJunchao Zhang matrixT->row_offsets->assign(matrixT->row_offsets->size(),indexBase); 13921a2c6b5cSJunchao Zhang } 13931a2c6b5cSJunchao Zhang 1394a49f1ed0SStefano Zampini cusparsestruct->csr2csc_i = new THRUSTINTARRAY(matrix->num_entries); 1395a49f1ed0SStefano Zampini PetscStackCallThrust(thrust::transform(thrust::device,matrixT->values->begin(),matrixT->values->end(),cusparsestruct->csr2csc_i->begin(),PetscScalarToPetscInt())); 1396a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1397a49f1ed0SStefano Zampini err = cudaFree(csr2cscBuffer);CHKERRCUDA(err); 1398a49f1ed0SStefano Zampini #endif 1399a49f1ed0SStefano Zampini } 1400a49f1ed0SStefano Zampini PetscStackCallThrust(thrust::copy(thrust::device,thrust::make_permutation_iterator(matrix->values->begin(), cusparsestruct->csr2csc_i->begin()), 1401a49f1ed0SStefano Zampini thrust::make_permutation_iterator(matrix->values->begin(), cusparsestruct->csr2csc_i->end()), 1402a49f1ed0SStefano Zampini matrixT->values->begin())); 1403a49f1ed0SStefano Zampini } 1404ee7b52eaSHong Zhang ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 140585ba7357SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1406213423ffSJunchao Zhang /* the compressed row indices is not used for matTranspose */ 1407213423ffSJunchao Zhang matstructT->cprowIndices = NULL; 1408aa372e3fSPaul Mullowney /* assign the pointer */ 1409aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSE*)A->spptr)->matTranspose = matstructT; 14101a2c6b5cSJunchao Zhang A->transupdated = PETSC_TRUE; 1411bda325fcSPaul Mullowney PetscFunctionReturn(0); 1412bda325fcSPaul Mullowney } 1413bda325fcSPaul Mullowney 1414a49f1ed0SStefano Zampini /* Why do we need to analyze the transposed matrix again? Can't we just use op(A) = CUSPARSE_OPERATION_TRANSPOSE in MatSolve_SeqAIJCUSPARSE? */ 14156fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE(Mat A,Vec bb,Vec xx) 1416bda325fcSPaul Mullowney { 1417c41cb2e2SAlejandro Lamas Daviña PetscInt n = xx->map->n; 1418465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1419465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1420465f34aeSAlejandro Lamas Daviña thrust::device_ptr<const PetscScalar> bGPU; 1421465f34aeSAlejandro Lamas Daviña thrust::device_ptr<PetscScalar> xGPU; 1422bda325fcSPaul Mullowney cusparseStatus_t stat; 1423bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1424aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1425aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1426aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1427b175d8bbSPaul Mullowney PetscErrorCode ierr; 1428bda325fcSPaul Mullowney 1429bda325fcSPaul Mullowney PetscFunctionBegin; 1430aa372e3fSPaul Mullowney /* Analyze the matrix and create the transpose ... on the fly */ 1431aa372e3fSPaul Mullowney if (!loTriFactorT && !upTriFactorT) { 1432bda325fcSPaul Mullowney ierr = MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(A);CHKERRQ(ierr); 1433aa372e3fSPaul Mullowney loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1434aa372e3fSPaul Mullowney upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1435bda325fcSPaul Mullowney } 1436bda325fcSPaul Mullowney 1437bda325fcSPaul Mullowney /* Get the GPU pointers */ 1438c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1439c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 1440c41cb2e2SAlejandro Lamas Daviña xGPU = thrust::device_pointer_cast(xarray); 1441c41cb2e2SAlejandro Lamas Daviña bGPU = thrust::device_pointer_cast(barray); 1442bda325fcSPaul Mullowney 14437a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1444aa372e3fSPaul Mullowney /* First, reorder with the row permutation */ 1445a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->begin()), 1446c41cb2e2SAlejandro Lamas Daviña thrust::make_permutation_iterator(bGPU+n, cusparseTriFactors->rpermIndices->end()), 1447c41cb2e2SAlejandro Lamas Daviña xGPU); 1448aa372e3fSPaul Mullowney 1449aa372e3fSPaul Mullowney /* First, solve U */ 1450aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactorT->solveOp, 1451afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, 14521b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1453afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_entries, 1454afb2bd1cSJunchao Zhang #endif 1455afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactorT->descr, 1456aa372e3fSPaul Mullowney upTriFactorT->csrMat->values->data().get(), 1457aa372e3fSPaul Mullowney upTriFactorT->csrMat->row_offsets->data().get(), 1458aa372e3fSPaul Mullowney upTriFactorT->csrMat->column_indices->data().get(), 1459aa372e3fSPaul Mullowney upTriFactorT->solveInfo, 1460d49cd2b7SBarry Smith xarray, 14611b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1462d49cd2b7SBarry Smith tempGPU->data().get(), 1463d49cd2b7SBarry Smith upTriFactorT->solvePolicy, upTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1464d49cd2b7SBarry Smith #else 1465d49cd2b7SBarry Smith tempGPU->data().get());CHKERRCUSPARSE(stat); 1466afb2bd1cSJunchao Zhang #endif 1467aa372e3fSPaul Mullowney 1468aa372e3fSPaul Mullowney /* Then, solve L */ 1469aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactorT->solveOp, 1470afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, 14711b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1472afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_entries, 1473afb2bd1cSJunchao Zhang #endif 1474afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactorT->descr, 1475aa372e3fSPaul Mullowney loTriFactorT->csrMat->values->data().get(), 1476aa372e3fSPaul Mullowney loTriFactorT->csrMat->row_offsets->data().get(), 1477aa372e3fSPaul Mullowney loTriFactorT->csrMat->column_indices->data().get(), 1478aa372e3fSPaul Mullowney loTriFactorT->solveInfo, 1479d49cd2b7SBarry Smith tempGPU->data().get(), 14801b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1481d49cd2b7SBarry Smith xarray, 1482d49cd2b7SBarry Smith loTriFactorT->solvePolicy, loTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1483d49cd2b7SBarry Smith #else 1484d49cd2b7SBarry Smith xarray);CHKERRCUSPARSE(stat); 1485afb2bd1cSJunchao Zhang #endif 1486aa372e3fSPaul Mullowney 1487aa372e3fSPaul Mullowney /* Last, copy the solution, xGPU, into a temporary with the column permutation ... can't be done in place. */ 1488a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(xGPU, cusparseTriFactors->cpermIndices->begin()), 1489c41cb2e2SAlejandro Lamas Daviña thrust::make_permutation_iterator(xGPU+n, cusparseTriFactors->cpermIndices->end()), 1490aa372e3fSPaul Mullowney tempGPU->begin()); 1491aa372e3fSPaul Mullowney 1492aa372e3fSPaul Mullowney /* Copy the temporary to the full solution. */ 1493a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),tempGPU->begin(), tempGPU->end(), xGPU); 1494bda325fcSPaul Mullowney 1495bda325fcSPaul Mullowney /* restore */ 1496c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1497c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 1498661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1499958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 1500bda325fcSPaul Mullowney PetscFunctionReturn(0); 1501bda325fcSPaul Mullowney } 1502bda325fcSPaul Mullowney 15036fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering(Mat A,Vec bb,Vec xx) 1504bda325fcSPaul Mullowney { 1505465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1506465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1507bda325fcSPaul Mullowney cusparseStatus_t stat; 1508bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1509aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1510aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1511aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1512b175d8bbSPaul Mullowney PetscErrorCode ierr; 1513bda325fcSPaul Mullowney 1514bda325fcSPaul Mullowney PetscFunctionBegin; 1515aa372e3fSPaul Mullowney /* Analyze the matrix and create the transpose ... on the fly */ 1516aa372e3fSPaul Mullowney if (!loTriFactorT && !upTriFactorT) { 1517bda325fcSPaul Mullowney ierr = MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(A);CHKERRQ(ierr); 1518aa372e3fSPaul Mullowney loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1519aa372e3fSPaul Mullowney upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1520bda325fcSPaul Mullowney } 1521bda325fcSPaul Mullowney 1522bda325fcSPaul Mullowney /* Get the GPU pointers */ 1523c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1524c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 1525bda325fcSPaul Mullowney 15267a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1527aa372e3fSPaul Mullowney /* First, solve U */ 1528aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactorT->solveOp, 1529afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, 15301b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1531afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_entries, 1532afb2bd1cSJunchao Zhang #endif 1533afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactorT->descr, 1534aa372e3fSPaul Mullowney upTriFactorT->csrMat->values->data().get(), 1535aa372e3fSPaul Mullowney upTriFactorT->csrMat->row_offsets->data().get(), 1536aa372e3fSPaul Mullowney upTriFactorT->csrMat->column_indices->data().get(), 1537aa372e3fSPaul Mullowney upTriFactorT->solveInfo, 1538d49cd2b7SBarry Smith barray, 15391b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1540d49cd2b7SBarry Smith tempGPU->data().get(), 1541d49cd2b7SBarry Smith upTriFactorT->solvePolicy, upTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1542d49cd2b7SBarry Smith #else 1543d49cd2b7SBarry Smith tempGPU->data().get());CHKERRCUSPARSE(stat); 1544afb2bd1cSJunchao Zhang #endif 1545aa372e3fSPaul Mullowney 1546aa372e3fSPaul Mullowney /* Then, solve L */ 1547aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactorT->solveOp, 1548afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, 15491b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1550afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_entries, 1551afb2bd1cSJunchao Zhang #endif 1552afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactorT->descr, 1553aa372e3fSPaul Mullowney loTriFactorT->csrMat->values->data().get(), 1554aa372e3fSPaul Mullowney loTriFactorT->csrMat->row_offsets->data().get(), 1555aa372e3fSPaul Mullowney loTriFactorT->csrMat->column_indices->data().get(), 1556aa372e3fSPaul Mullowney loTriFactorT->solveInfo, 1557d49cd2b7SBarry Smith tempGPU->data().get(), 15581b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1559d49cd2b7SBarry Smith xarray, 1560d49cd2b7SBarry Smith loTriFactorT->solvePolicy, loTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1561d49cd2b7SBarry Smith #else 1562d49cd2b7SBarry Smith xarray);CHKERRCUSPARSE(stat); 1563afb2bd1cSJunchao Zhang #endif 1564bda325fcSPaul Mullowney 1565bda325fcSPaul Mullowney /* restore */ 1566c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1567c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 1568661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1569958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 1570bda325fcSPaul Mullowney PetscFunctionReturn(0); 1571bda325fcSPaul Mullowney } 1572bda325fcSPaul Mullowney 15736fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE(Mat A,Vec bb,Vec xx) 15749ae82921SPaul Mullowney { 1575465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1576465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1577465f34aeSAlejandro Lamas Daviña thrust::device_ptr<const PetscScalar> bGPU; 1578465f34aeSAlejandro Lamas Daviña thrust::device_ptr<PetscScalar> xGPU; 15799ae82921SPaul Mullowney cusparseStatus_t stat; 15809ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1581aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 1582aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 1583aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1584b175d8bbSPaul Mullowney PetscErrorCode ierr; 15859ae82921SPaul Mullowney 15869ae82921SPaul Mullowney PetscFunctionBegin; 1587ebc8f436SDominic Meiser 1588e057df02SPaul Mullowney /* Get the GPU pointers */ 1589c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1590c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 1591c41cb2e2SAlejandro Lamas Daviña xGPU = thrust::device_pointer_cast(xarray); 1592c41cb2e2SAlejandro Lamas Daviña bGPU = thrust::device_pointer_cast(barray); 15939ae82921SPaul Mullowney 15947a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1595aa372e3fSPaul Mullowney /* First, reorder with the row permutation */ 1596a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->begin()), 1597c41cb2e2SAlejandro Lamas Daviña thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->end()), 15984e4bbfaaSStefano Zampini tempGPU->begin()); 1599aa372e3fSPaul Mullowney 1600aa372e3fSPaul Mullowney /* Next, solve L */ 1601aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactor->solveOp, 1602afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, 16031b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1604afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_entries, 1605afb2bd1cSJunchao Zhang #endif 1606afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactor->descr, 1607aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), 1608aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->data().get(), 1609aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->data().get(), 1610aa372e3fSPaul Mullowney loTriFactor->solveInfo, 1611d49cd2b7SBarry Smith tempGPU->data().get(), 16121b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1613d49cd2b7SBarry Smith xarray, 1614d49cd2b7SBarry Smith loTriFactor->solvePolicy, loTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 1615d49cd2b7SBarry Smith #else 1616d49cd2b7SBarry Smith xarray);CHKERRCUSPARSE(stat); 1617afb2bd1cSJunchao Zhang #endif 1618aa372e3fSPaul Mullowney 1619aa372e3fSPaul Mullowney /* Then, solve U */ 1620aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactor->solveOp, 1621afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, 16221b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1623afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_entries, 1624afb2bd1cSJunchao Zhang #endif 1625afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactor->descr, 1626aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), 1627aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->data().get(), 1628aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->data().get(), 1629d49cd2b7SBarry Smith upTriFactor->solveInfo,xarray, 16301b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1631d49cd2b7SBarry Smith tempGPU->data().get(), 1632d49cd2b7SBarry Smith upTriFactor->solvePolicy, upTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 1633d49cd2b7SBarry Smith #else 1634d49cd2b7SBarry Smith tempGPU->data().get());CHKERRCUSPARSE(stat); 1635afb2bd1cSJunchao Zhang #endif 1636d49cd2b7SBarry Smith 16374e4bbfaaSStefano Zampini /* Last, reorder with the column permutation */ 1638a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(tempGPU->begin(), cusparseTriFactors->cpermIndices->begin()), 16394e4bbfaaSStefano Zampini thrust::make_permutation_iterator(tempGPU->begin(), cusparseTriFactors->cpermIndices->end()), 16404e4bbfaaSStefano Zampini xGPU); 16419ae82921SPaul Mullowney 1642c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1643c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 1644661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1645958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 16469ae82921SPaul Mullowney PetscFunctionReturn(0); 16479ae82921SPaul Mullowney } 16489ae82921SPaul Mullowney 16496fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE_NaturalOrdering(Mat A,Vec bb,Vec xx) 16509ae82921SPaul Mullowney { 1651465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1652465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 16539ae82921SPaul Mullowney cusparseStatus_t stat; 16549ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1655aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 1656aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 1657aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1658b175d8bbSPaul Mullowney PetscErrorCode ierr; 16599ae82921SPaul Mullowney 16609ae82921SPaul Mullowney PetscFunctionBegin; 1661e057df02SPaul Mullowney /* Get the GPU pointers */ 1662c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1663c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 16649ae82921SPaul Mullowney 16657a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1666aa372e3fSPaul Mullowney /* First, solve L */ 1667aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactor->solveOp, 1668afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, 16691b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1670afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_entries, 1671afb2bd1cSJunchao Zhang #endif 1672afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactor->descr, 1673aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), 1674aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->data().get(), 1675aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->data().get(), 1676aa372e3fSPaul Mullowney loTriFactor->solveInfo, 1677d49cd2b7SBarry Smith barray, 16781b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1679d49cd2b7SBarry Smith tempGPU->data().get(), 1680d49cd2b7SBarry Smith loTriFactor->solvePolicy,loTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 1681d49cd2b7SBarry Smith #else 1682d49cd2b7SBarry Smith tempGPU->data().get());CHKERRCUSPARSE(stat); 1683afb2bd1cSJunchao Zhang #endif 1684d49cd2b7SBarry Smith 1685aa372e3fSPaul Mullowney /* Next, solve U */ 1686aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactor->solveOp, 1687afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, 16881b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1689afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_entries, 1690afb2bd1cSJunchao Zhang #endif 1691afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactor->descr, 1692aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), 1693aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->data().get(), 1694aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->data().get(), 1695aa372e3fSPaul Mullowney upTriFactor->solveInfo, 1696d49cd2b7SBarry Smith tempGPU->data().get(), 16971b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1698d49cd2b7SBarry Smith xarray, 1699d49cd2b7SBarry Smith upTriFactor->solvePolicy, upTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 1700d49cd2b7SBarry Smith #else 1701d49cd2b7SBarry Smith xarray);CHKERRCUSPARSE(stat); 1702afb2bd1cSJunchao Zhang #endif 17039ae82921SPaul Mullowney 1704c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1705c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 1706661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1707958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 17089ae82921SPaul Mullowney PetscFunctionReturn(0); 17099ae82921SPaul Mullowney } 17109ae82921SPaul Mullowney 17117e8381f9SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSECopyFromGPU(Mat A) 17127e8381f9SStefano Zampini { 17137e8381f9SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 17147e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 17157e8381f9SStefano Zampini cudaError_t cerr; 17167e8381f9SStefano Zampini PetscErrorCode ierr; 17177e8381f9SStefano Zampini 17187e8381f9SStefano Zampini PetscFunctionBegin; 17197e8381f9SStefano Zampini if (A->offloadmask == PETSC_OFFLOAD_GPU) { 17207e8381f9SStefano Zampini CsrMatrix *matrix = (CsrMatrix*)cusp->mat->mat; 17217e8381f9SStefano Zampini 17227e8381f9SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSECopyFromGPU,A,0,0,0);CHKERRQ(ierr); 17237e8381f9SStefano Zampini cerr = cudaMemcpy(a->a, matrix->values->data().get(), a->nz*sizeof(PetscScalar), cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 17247e8381f9SStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 17257e8381f9SStefano Zampini ierr = PetscLogGpuToCpu(a->nz*sizeof(PetscScalar));CHKERRQ(ierr); 17267e8381f9SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSECopyFromGPU,A,0,0,0);CHKERRQ(ierr); 17277e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_BOTH; 17287e8381f9SStefano Zampini } 17297e8381f9SStefano Zampini PetscFunctionReturn(0); 17307e8381f9SStefano Zampini } 17317e8381f9SStefano Zampini 17327e8381f9SStefano Zampini static PetscErrorCode MatSeqAIJGetArray_SeqAIJCUSPARSE(Mat A,PetscScalar *array[]) 17337e8381f9SStefano Zampini { 17347e8381f9SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 17357e8381f9SStefano Zampini PetscErrorCode ierr; 17367e8381f9SStefano Zampini 17377e8381f9SStefano Zampini PetscFunctionBegin; 17387e8381f9SStefano Zampini ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 17397e8381f9SStefano Zampini *array = a->a; 17407e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_CPU; 17417e8381f9SStefano Zampini PetscFunctionReturn(0); 17427e8381f9SStefano Zampini } 17437e8381f9SStefano Zampini 1744*042217e8SBarry Smith PETSC_INTERN PetscErrorCode MatSeqAIJCUSPARSECopyToGPU(Mat A) 17459ae82921SPaul Mullowney { 1746aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 17477c700b8dSJunchao Zhang Mat_SeqAIJCUSPARSEMultStruct *matstruct = cusparsestruct->mat; 17489ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 1749213423ffSJunchao Zhang PetscInt m = A->rmap->n,*ii,*ridx,tmp; 17509ae82921SPaul Mullowney PetscErrorCode ierr; 1751aa372e3fSPaul Mullowney cusparseStatus_t stat; 1752abb89eb1SStefano Zampini PetscBool both = PETSC_TRUE; 1753b06137fdSPaul Mullowney cudaError_t err; 17549ae82921SPaul Mullowney 17559ae82921SPaul Mullowney PetscFunctionBegin; 1756e8d2b73aSMark Adams if (A->boundtocpu) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Cannot copy to GPU"); 1757c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 1758a49f1ed0SStefano Zampini if (A->nonzerostate == cusparsestruct->nonzerostate && cusparsestruct->format == MAT_CUSPARSE_CSR) { /* Copy values only */ 1759a49f1ed0SStefano Zampini CsrMatrix *matrix; 1760afb2bd1cSJunchao Zhang matrix = (CsrMatrix*)cusparsestruct->mat->mat; 176185ba7357SStefano Zampini 1762e8d2b73aSMark Adams if (a->nz && !a->a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CSR values"); 176385ba7357SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 1764afb2bd1cSJunchao Zhang matrix->values->assign(a->a, a->a+a->nz); 176505035670SJunchao Zhang err = WaitForCUDA();CHKERRCUDA(err); 17664863603aSSatish Balay ierr = PetscLogCpuToGpu((a->nz)*sizeof(PetscScalar));CHKERRQ(ierr); 176785ba7357SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 1768a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_FALSE);CHKERRQ(ierr); 176934d6c7a5SJose E. Roman } else { 1770abb89eb1SStefano Zampini PetscInt nnz; 177185ba7357SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 17727c700b8dSJunchao Zhang ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&cusparsestruct->mat,cusparsestruct->format);CHKERRQ(ierr); 1773a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr); 17747c700b8dSJunchao Zhang delete cusparsestruct->workVector; 177581902715SJunchao Zhang delete cusparsestruct->rowoffsets_gpu; 1776a49f1ed0SStefano Zampini cusparsestruct->workVector = NULL; 1777a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu = NULL; 17789ae82921SPaul Mullowney try { 17799ae82921SPaul Mullowney if (a->compressedrow.use) { 17809ae82921SPaul Mullowney m = a->compressedrow.nrows; 17819ae82921SPaul Mullowney ii = a->compressedrow.i; 17829ae82921SPaul Mullowney ridx = a->compressedrow.rindex; 17839ae82921SPaul Mullowney } else { 1784213423ffSJunchao Zhang m = A->rmap->n; 1785213423ffSJunchao Zhang ii = a->i; 1786e6e9a74fSStefano Zampini ridx = NULL; 17879ae82921SPaul Mullowney } 1788e8d2b73aSMark Adams if (!ii) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CSR row data"); 1789e8d2b73aSMark Adams if (m && !a->j) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CSR column data"); 1790abb89eb1SStefano Zampini if (!a->a) { nnz = ii[m]; both = PETSC_FALSE; } 1791abb89eb1SStefano Zampini else nnz = a->nz; 17929ae82921SPaul Mullowney 179385ba7357SStefano Zampini /* create cusparse matrix */ 1794abb89eb1SStefano Zampini cusparsestruct->nrows = m; 1795aa372e3fSPaul Mullowney matstruct = new Mat_SeqAIJCUSPARSEMultStruct; 179657d48284SJunchao Zhang stat = cusparseCreateMatDescr(&matstruct->descr);CHKERRCUSPARSE(stat); 179757d48284SJunchao Zhang stat = cusparseSetMatIndexBase(matstruct->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 179857d48284SJunchao Zhang stat = cusparseSetMatType(matstruct->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 17999ae82921SPaul Mullowney 1800afb2bd1cSJunchao Zhang err = cudaMalloc((void **)&(matstruct->alpha_one),sizeof(PetscScalar));CHKERRCUDA(err); 18017656d835SStefano Zampini err = cudaMalloc((void **)&(matstruct->beta_zero),sizeof(PetscScalar));CHKERRCUDA(err); 18027656d835SStefano Zampini err = cudaMalloc((void **)&(matstruct->beta_one), sizeof(PetscScalar));CHKERRCUDA(err); 1803afb2bd1cSJunchao Zhang err = cudaMemcpy(matstruct->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 18047656d835SStefano Zampini err = cudaMemcpy(matstruct->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 18057656d835SStefano Zampini err = cudaMemcpy(matstruct->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 180657d48284SJunchao Zhang stat = cusparseSetPointerMode(cusparsestruct->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 1807b06137fdSPaul Mullowney 1808aa372e3fSPaul Mullowney /* Build a hybrid/ellpack matrix if this option is chosen for the storage */ 1809aa372e3fSPaul Mullowney if (cusparsestruct->format==MAT_CUSPARSE_CSR) { 1810aa372e3fSPaul Mullowney /* set the matrix */ 1811afb2bd1cSJunchao Zhang CsrMatrix *mat= new CsrMatrix; 1812afb2bd1cSJunchao Zhang mat->num_rows = m; 1813afb2bd1cSJunchao Zhang mat->num_cols = A->cmap->n; 1814abb89eb1SStefano Zampini mat->num_entries = nnz; 1815afb2bd1cSJunchao Zhang mat->row_offsets = new THRUSTINTARRAY32(m+1); 1816afb2bd1cSJunchao Zhang mat->row_offsets->assign(ii, ii + m+1); 18179ae82921SPaul Mullowney 1818abb89eb1SStefano Zampini mat->column_indices = new THRUSTINTARRAY32(nnz); 1819abb89eb1SStefano Zampini mat->column_indices->assign(a->j, a->j+nnz); 1820aa372e3fSPaul Mullowney 1821abb89eb1SStefano Zampini mat->values = new THRUSTARRAY(nnz); 1822abb89eb1SStefano Zampini if (a->a) mat->values->assign(a->a, a->a+nnz); 1823aa372e3fSPaul Mullowney 1824aa372e3fSPaul Mullowney /* assign the pointer */ 1825afb2bd1cSJunchao Zhang matstruct->mat = mat; 1826afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1827afb2bd1cSJunchao Zhang if (mat->num_rows) { /* cusparse errors on empty matrices! */ 1828afb2bd1cSJunchao Zhang stat = cusparseCreateCsr(&matstruct->matDescr, 1829afb2bd1cSJunchao Zhang mat->num_rows, mat->num_cols, mat->num_entries, 1830afb2bd1cSJunchao Zhang mat->row_offsets->data().get(), mat->column_indices->data().get(), 1831afb2bd1cSJunchao Zhang mat->values->data().get(), 1832afb2bd1cSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, /* row offset, col idx types due to THRUSTINTARRAY32 */ 1833afb2bd1cSJunchao Zhang CUSPARSE_INDEX_BASE_ZERO,cusparse_scalartype);CHKERRCUSPARSE(stat); 1834afb2bd1cSJunchao Zhang } 1835afb2bd1cSJunchao Zhang #endif 1836aa372e3fSPaul Mullowney } else if (cusparsestruct->format==MAT_CUSPARSE_ELL || cusparsestruct->format==MAT_CUSPARSE_HYB) { 1837afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1838afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 1839afb2bd1cSJunchao Zhang #else 1840afb2bd1cSJunchao Zhang CsrMatrix *mat= new CsrMatrix; 1841afb2bd1cSJunchao Zhang mat->num_rows = m; 1842afb2bd1cSJunchao Zhang mat->num_cols = A->cmap->n; 1843abb89eb1SStefano Zampini mat->num_entries = nnz; 1844afb2bd1cSJunchao Zhang mat->row_offsets = new THRUSTINTARRAY32(m+1); 1845afb2bd1cSJunchao Zhang mat->row_offsets->assign(ii, ii + m+1); 1846aa372e3fSPaul Mullowney 1847abb89eb1SStefano Zampini mat->column_indices = new THRUSTINTARRAY32(nnz); 1848abb89eb1SStefano Zampini mat->column_indices->assign(a->j, a->j+nnz); 1849aa372e3fSPaul Mullowney 1850abb89eb1SStefano Zampini mat->values = new THRUSTARRAY(nnz); 1851abb89eb1SStefano Zampini if (a->a) mat->values->assign(a->a, a->a+nnz); 1852aa372e3fSPaul Mullowney 1853aa372e3fSPaul Mullowney cusparseHybMat_t hybMat; 185457d48284SJunchao Zhang stat = cusparseCreateHybMat(&hybMat);CHKERRCUSPARSE(stat); 1855aa372e3fSPaul Mullowney cusparseHybPartition_t partition = cusparsestruct->format==MAT_CUSPARSE_ELL ? 1856aa372e3fSPaul Mullowney CUSPARSE_HYB_PARTITION_MAX : CUSPARSE_HYB_PARTITION_AUTO; 1857afb2bd1cSJunchao Zhang stat = cusparse_csr2hyb(cusparsestruct->handle, mat->num_rows, mat->num_cols, 1858afb2bd1cSJunchao Zhang matstruct->descr, mat->values->data().get(), 1859afb2bd1cSJunchao Zhang mat->row_offsets->data().get(), 1860afb2bd1cSJunchao Zhang mat->column_indices->data().get(), 186157d48284SJunchao Zhang hybMat, 0, partition);CHKERRCUSPARSE(stat); 1862aa372e3fSPaul Mullowney /* assign the pointer */ 1863aa372e3fSPaul Mullowney matstruct->mat = hybMat; 1864aa372e3fSPaul Mullowney 1865afb2bd1cSJunchao Zhang if (mat) { 1866afb2bd1cSJunchao Zhang if (mat->values) delete (THRUSTARRAY*)mat->values; 1867afb2bd1cSJunchao Zhang if (mat->column_indices) delete (THRUSTINTARRAY32*)mat->column_indices; 1868afb2bd1cSJunchao Zhang if (mat->row_offsets) delete (THRUSTINTARRAY32*)mat->row_offsets; 1869afb2bd1cSJunchao Zhang delete (CsrMatrix*)mat; 1870087f3262SPaul Mullowney } 1871afb2bd1cSJunchao Zhang #endif 1872087f3262SPaul Mullowney } 1873ca45077fSPaul Mullowney 1874aa372e3fSPaul Mullowney /* assign the compressed row indices */ 1875213423ffSJunchao Zhang if (a->compressedrow.use) { 1876213423ffSJunchao Zhang cusparsestruct->workVector = new THRUSTARRAY(m); 1877aa372e3fSPaul Mullowney matstruct->cprowIndices = new THRUSTINTARRAY(m); 1878aa372e3fSPaul Mullowney matstruct->cprowIndices->assign(ridx,ridx+m); 1879213423ffSJunchao Zhang tmp = m; 1880213423ffSJunchao Zhang } else { 1881213423ffSJunchao Zhang cusparsestruct->workVector = NULL; 1882213423ffSJunchao Zhang matstruct->cprowIndices = NULL; 1883213423ffSJunchao Zhang tmp = 0; 1884213423ffSJunchao Zhang } 1885213423ffSJunchao Zhang ierr = PetscLogCpuToGpu(((m+1)+(a->nz))*sizeof(int)+tmp*sizeof(PetscInt)+(3+(a->nz))*sizeof(PetscScalar));CHKERRQ(ierr); 1886aa372e3fSPaul Mullowney 1887aa372e3fSPaul Mullowney /* assign the pointer */ 1888aa372e3fSPaul Mullowney cusparsestruct->mat = matstruct; 18899ae82921SPaul Mullowney } catch(char *ex) { 18909ae82921SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 18919ae82921SPaul Mullowney } 189205035670SJunchao Zhang err = WaitForCUDA();CHKERRCUDA(err); 189385ba7357SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 189434d6c7a5SJose E. Roman cusparsestruct->nonzerostate = A->nonzerostate; 189534d6c7a5SJose E. Roman } 1896abb89eb1SStefano Zampini if (both) A->offloadmask = PETSC_OFFLOAD_BOTH; 18979ae82921SPaul Mullowney } 18989ae82921SPaul Mullowney PetscFunctionReturn(0); 18999ae82921SPaul Mullowney } 19009ae82921SPaul Mullowney 1901c41cb2e2SAlejandro Lamas Daviña struct VecCUDAPlusEquals 1902aa372e3fSPaul Mullowney { 1903aa372e3fSPaul Mullowney template <typename Tuple> 1904aa372e3fSPaul Mullowney __host__ __device__ 1905aa372e3fSPaul Mullowney void operator()(Tuple t) 1906aa372e3fSPaul Mullowney { 1907aa372e3fSPaul Mullowney thrust::get<1>(t) = thrust::get<1>(t) + thrust::get<0>(t); 1908aa372e3fSPaul Mullowney } 1909aa372e3fSPaul Mullowney }; 1910aa372e3fSPaul Mullowney 19117e8381f9SStefano Zampini struct VecCUDAEquals 19127e8381f9SStefano Zampini { 19137e8381f9SStefano Zampini template <typename Tuple> 19147e8381f9SStefano Zampini __host__ __device__ 19157e8381f9SStefano Zampini void operator()(Tuple t) 19167e8381f9SStefano Zampini { 19177e8381f9SStefano Zampini thrust::get<1>(t) = thrust::get<0>(t); 19187e8381f9SStefano Zampini } 19197e8381f9SStefano Zampini }; 19207e8381f9SStefano Zampini 1921e6e9a74fSStefano Zampini struct VecCUDAEqualsReverse 1922e6e9a74fSStefano Zampini { 1923e6e9a74fSStefano Zampini template <typename Tuple> 1924e6e9a74fSStefano Zampini __host__ __device__ 1925e6e9a74fSStefano Zampini void operator()(Tuple t) 1926e6e9a74fSStefano Zampini { 1927e6e9a74fSStefano Zampini thrust::get<0>(t) = thrust::get<1>(t); 1928e6e9a74fSStefano Zampini } 1929e6e9a74fSStefano Zampini }; 1930e6e9a74fSStefano Zampini 1931afb2bd1cSJunchao Zhang struct MatMatCusparse { 1932ccdfe979SStefano Zampini PetscBool cisdense; 1933ccdfe979SStefano Zampini PetscScalar *Bt; 1934ccdfe979SStefano Zampini Mat X; 1935fcdce8c4SStefano Zampini PetscBool reusesym; /* Cusparse does not have split symbolic and numeric phases for sparse matmat operations */ 1936fcdce8c4SStefano Zampini PetscLogDouble flops; 1937fcdce8c4SStefano Zampini CsrMatrix *Bcsr; 1938afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1939fcdce8c4SStefano Zampini cusparseSpMatDescr_t matSpBDescr; 1940afb2bd1cSJunchao Zhang PetscBool initialized; /* C = alpha op(A) op(B) + beta C */ 1941afb2bd1cSJunchao Zhang cusparseDnMatDescr_t matBDescr; 1942afb2bd1cSJunchao Zhang cusparseDnMatDescr_t matCDescr; 1943afb2bd1cSJunchao Zhang PetscInt Blda,Clda; /* Record leading dimensions of B and C here to detect changes*/ 1944fcdce8c4SStefano Zampini size_t mmBufferSize; 1945fcdce8c4SStefano Zampini void *mmBuffer; 1946fcdce8c4SStefano Zampini void *mmBuffer2; /* SpGEMM WorkEstimation buffer */ 1947fcdce8c4SStefano Zampini cusparseSpGEMMDescr_t spgemmDesc; 1948afb2bd1cSJunchao Zhang #endif 1949afb2bd1cSJunchao Zhang }; 1950ccdfe979SStefano Zampini 1951ccdfe979SStefano Zampini static PetscErrorCode MatDestroy_MatMatCusparse(void *data) 1952ccdfe979SStefano Zampini { 1953ccdfe979SStefano Zampini PetscErrorCode ierr; 1954ccdfe979SStefano Zampini MatMatCusparse *mmdata = (MatMatCusparse *)data; 1955ccdfe979SStefano Zampini cudaError_t cerr; 1956fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1957fcdce8c4SStefano Zampini cusparseStatus_t stat; 1958fcdce8c4SStefano Zampini #endif 1959ccdfe979SStefano Zampini 1960ccdfe979SStefano Zampini PetscFunctionBegin; 1961ccdfe979SStefano Zampini cerr = cudaFree(mmdata->Bt);CHKERRCUDA(cerr); 1962fcdce8c4SStefano Zampini delete mmdata->Bcsr; 1963afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1964fcdce8c4SStefano Zampini if (mmdata->matSpBDescr) { stat = cusparseDestroySpMat(mmdata->matSpBDescr);CHKERRCUSPARSE(stat); } 1965fcdce8c4SStefano Zampini if (mmdata->mmBuffer) { cerr = cudaFree(mmdata->mmBuffer);CHKERRCUDA(cerr); } 1966fcdce8c4SStefano Zampini if (mmdata->mmBuffer2) { cerr = cudaFree(mmdata->mmBuffer2);CHKERRCUDA(cerr); } 1967afb2bd1cSJunchao Zhang if (mmdata->matBDescr) { stat = cusparseDestroyDnMat(mmdata->matBDescr);CHKERRCUSPARSE(stat); } 1968afb2bd1cSJunchao Zhang if (mmdata->matCDescr) { stat = cusparseDestroyDnMat(mmdata->matCDescr);CHKERRCUSPARSE(stat); } 1969fcdce8c4SStefano Zampini if (mmdata->spgemmDesc) { stat = cusparseSpGEMM_destroyDescr(mmdata->spgemmDesc);CHKERRCUSPARSE(stat); } 1970afb2bd1cSJunchao Zhang #endif 1971ccdfe979SStefano Zampini ierr = MatDestroy(&mmdata->X);CHKERRQ(ierr); 1972ccdfe979SStefano Zampini ierr = PetscFree(data);CHKERRQ(ierr); 1973ccdfe979SStefano Zampini PetscFunctionReturn(0); 1974ccdfe979SStefano Zampini } 1975ccdfe979SStefano Zampini 1976ccdfe979SStefano Zampini PETSC_INTERN PetscErrorCode MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Private(Mat,Mat,Mat,PetscBool,PetscBool); 1977ccdfe979SStefano Zampini 1978ccdfe979SStefano Zampini static PetscErrorCode MatProductNumeric_SeqAIJCUSPARSE_SeqDENSECUDA(Mat C) 1979ccdfe979SStefano Zampini { 1980ccdfe979SStefano Zampini Mat_Product *product = C->product; 1981ccdfe979SStefano Zampini Mat A,B; 1982afb2bd1cSJunchao Zhang PetscInt m,n,blda,clda; 1983ccdfe979SStefano Zampini PetscBool flg,biscuda; 1984ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSE *cusp; 1985ccdfe979SStefano Zampini cusparseStatus_t stat; 1986ccdfe979SStefano Zampini cusparseOperation_t opA; 1987ccdfe979SStefano Zampini const PetscScalar *barray; 1988ccdfe979SStefano Zampini PetscScalar *carray; 1989ccdfe979SStefano Zampini PetscErrorCode ierr; 1990ccdfe979SStefano Zampini MatMatCusparse *mmdata; 1991ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *mat; 1992ccdfe979SStefano Zampini CsrMatrix *csrmat; 1993ccdfe979SStefano Zampini 1994ccdfe979SStefano Zampini PetscFunctionBegin; 1995ccdfe979SStefano Zampini MatCheckProduct(C,1); 1996e8d2b73aSMark Adams if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data empty"); 1997ccdfe979SStefano Zampini mmdata = (MatMatCusparse*)product->data; 1998ccdfe979SStefano Zampini A = product->A; 1999ccdfe979SStefano Zampini B = product->B; 2000ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2001e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)A),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 2002ccdfe979SStefano Zampini /* currently CopyToGpu does not copy if the matrix is bound to CPU 2003ccdfe979SStefano Zampini Instead of silently accepting the wrong answer, I prefer to raise the error */ 2004ccdfe979SStefano Zampini if (A->boundtocpu) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONG,"Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 2005ccdfe979SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 2006ccdfe979SStefano Zampini cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2007ccdfe979SStefano Zampini switch (product->type) { 2008ccdfe979SStefano Zampini case MATPRODUCT_AB: 2009ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 2010ccdfe979SStefano Zampini mat = cusp->mat; 2011ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2012ccdfe979SStefano Zampini m = A->rmap->n; 2013ccdfe979SStefano Zampini n = B->cmap->n; 2014ccdfe979SStefano Zampini break; 2015ccdfe979SStefano Zampini case MATPRODUCT_AtB: 20161a2c6b5cSJunchao Zhang if (!A->form_explicit_transpose) { 2017e6e9a74fSStefano Zampini mat = cusp->mat; 2018e6e9a74fSStefano Zampini opA = CUSPARSE_OPERATION_TRANSPOSE; 2019e6e9a74fSStefano Zampini } else { 20201a2c6b5cSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTransposeForMult(A);CHKERRQ(ierr); 2021ccdfe979SStefano Zampini mat = cusp->matTranspose; 2022ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2023e6e9a74fSStefano Zampini } 2024ccdfe979SStefano Zampini m = A->cmap->n; 2025ccdfe979SStefano Zampini n = B->cmap->n; 2026ccdfe979SStefano Zampini break; 2027ccdfe979SStefano Zampini case MATPRODUCT_ABt: 2028ccdfe979SStefano Zampini case MATPRODUCT_RARt: 2029ccdfe979SStefano Zampini mat = cusp->mat; 2030ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2031ccdfe979SStefano Zampini m = A->rmap->n; 2032ccdfe979SStefano Zampini n = B->rmap->n; 2033ccdfe979SStefano Zampini break; 2034ccdfe979SStefano Zampini default: 2035e8d2b73aSMark Adams SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 2036ccdfe979SStefano Zampini } 2037e8d2b73aSMark Adams if (!mat) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 2038ccdfe979SStefano Zampini csrmat = (CsrMatrix*)mat->mat; 2039ccdfe979SStefano Zampini /* if the user passed a CPU matrix, copy the data to the GPU */ 2040ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)B,MATSEQDENSECUDA,&biscuda);CHKERRQ(ierr); 2041afb2bd1cSJunchao Zhang if (!biscuda) {ierr = MatConvert(B,MATSEQDENSECUDA,MAT_INPLACE_MATRIX,&B);CHKERRQ(ierr);} 2042ccdfe979SStefano Zampini ierr = MatDenseCUDAGetArrayRead(B,&barray);CHKERRQ(ierr); 2043afb2bd1cSJunchao Zhang 2044ccdfe979SStefano Zampini ierr = MatDenseGetLDA(B,&blda);CHKERRQ(ierr); 2045c8378d12SStefano Zampini if (product->type == MATPRODUCT_RARt || product->type == MATPRODUCT_PtAP) { 2046c8378d12SStefano Zampini ierr = MatDenseCUDAGetArrayWrite(mmdata->X,&carray);CHKERRQ(ierr); 2047c8378d12SStefano Zampini ierr = MatDenseGetLDA(mmdata->X,&clda);CHKERRQ(ierr); 2048c8378d12SStefano Zampini } else { 2049c8378d12SStefano Zampini ierr = MatDenseCUDAGetArrayWrite(C,&carray);CHKERRQ(ierr); 2050c8378d12SStefano Zampini ierr = MatDenseGetLDA(C,&clda);CHKERRQ(ierr); 2051c8378d12SStefano Zampini } 2052c8378d12SStefano Zampini 2053c8378d12SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2054afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2055afb2bd1cSJunchao Zhang cusparseOperation_t opB = (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) ? CUSPARSE_OPERATION_TRANSPOSE : CUSPARSE_OPERATION_NON_TRANSPOSE; 2056fcdce8c4SStefano Zampini /* (re)allcoate mmBuffer if not initialized or LDAs are different */ 2057afb2bd1cSJunchao Zhang if (!mmdata->initialized || mmdata->Blda != blda || mmdata->Clda != clda) { 2058fcdce8c4SStefano Zampini size_t mmBufferSize; 2059afb2bd1cSJunchao Zhang if (mmdata->initialized && mmdata->Blda != blda) {stat = cusparseDestroyDnMat(mmdata->matBDescr);CHKERRCUSPARSE(stat); mmdata->matBDescr = NULL;} 2060afb2bd1cSJunchao Zhang if (!mmdata->matBDescr) { 2061afb2bd1cSJunchao Zhang stat = cusparseCreateDnMat(&mmdata->matBDescr,B->rmap->n,B->cmap->n,blda,(void*)barray,cusparse_scalartype,CUSPARSE_ORDER_COL);CHKERRCUSPARSE(stat); 2062afb2bd1cSJunchao Zhang mmdata->Blda = blda; 2063afb2bd1cSJunchao Zhang } 2064c8378d12SStefano Zampini 2065afb2bd1cSJunchao Zhang if (mmdata->initialized && mmdata->Clda != clda) {stat = cusparseDestroyDnMat(mmdata->matCDescr);CHKERRCUSPARSE(stat); mmdata->matCDescr = NULL;} 2066afb2bd1cSJunchao Zhang if (!mmdata->matCDescr) { /* matCDescr is for C or mmdata->X */ 2067afb2bd1cSJunchao Zhang stat = cusparseCreateDnMat(&mmdata->matCDescr,m,n,clda,(void*)carray,cusparse_scalartype,CUSPARSE_ORDER_COL);CHKERRCUSPARSE(stat); 2068afb2bd1cSJunchao Zhang mmdata->Clda = clda; 2069afb2bd1cSJunchao Zhang } 2070afb2bd1cSJunchao Zhang 2071afb2bd1cSJunchao Zhang if (!mat->matDescr) { 2072afb2bd1cSJunchao Zhang stat = cusparseCreateCsr(&mat->matDescr, 2073afb2bd1cSJunchao Zhang csrmat->num_rows, csrmat->num_cols, csrmat->num_entries, 2074afb2bd1cSJunchao Zhang csrmat->row_offsets->data().get(), csrmat->column_indices->data().get(), 2075afb2bd1cSJunchao Zhang csrmat->values->data().get(), 2076afb2bd1cSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, /* row offset, col idx types due to THRUSTINTARRAY32 */ 2077afb2bd1cSJunchao Zhang CUSPARSE_INDEX_BASE_ZERO,cusparse_scalartype);CHKERRCUSPARSE(stat); 2078afb2bd1cSJunchao Zhang } 2079afb2bd1cSJunchao Zhang stat = cusparseSpMM_bufferSize(cusp->handle,opA,opB,mat->alpha_one, 2080afb2bd1cSJunchao Zhang mat->matDescr,mmdata->matBDescr,mat->beta_zero, 2081afb2bd1cSJunchao Zhang mmdata->matCDescr,cusparse_scalartype, 2082fcdce8c4SStefano Zampini cusp->spmmAlg,&mmBufferSize);CHKERRCUSPARSE(stat); 2083fcdce8c4SStefano Zampini if ((mmdata->mmBuffer && mmdata->mmBufferSize < mmBufferSize) || !mmdata->mmBuffer) { 2084ee7b52eaSHong Zhang cudaError_t cerr; 2085fcdce8c4SStefano Zampini cerr = cudaFree(mmdata->mmBuffer);CHKERRCUDA(cerr); 2086fcdce8c4SStefano Zampini cerr = cudaMalloc(&mmdata->mmBuffer,mmBufferSize);CHKERRCUDA(cerr); 2087fcdce8c4SStefano Zampini mmdata->mmBufferSize = mmBufferSize; 2088fcdce8c4SStefano Zampini } 2089afb2bd1cSJunchao Zhang mmdata->initialized = PETSC_TRUE; 2090afb2bd1cSJunchao Zhang } else { 2091afb2bd1cSJunchao Zhang /* to be safe, always update pointers of the mats */ 2092afb2bd1cSJunchao Zhang stat = cusparseSpMatSetValues(mat->matDescr,csrmat->values->data().get());CHKERRCUSPARSE(stat); 2093afb2bd1cSJunchao Zhang stat = cusparseDnMatSetValues(mmdata->matBDescr,(void*)barray);CHKERRCUSPARSE(stat); 2094afb2bd1cSJunchao Zhang stat = cusparseDnMatSetValues(mmdata->matCDescr,(void*)carray);CHKERRCUSPARSE(stat); 2095afb2bd1cSJunchao Zhang } 2096afb2bd1cSJunchao Zhang 2097afb2bd1cSJunchao Zhang /* do cusparseSpMM, which supports transpose on B */ 2098afb2bd1cSJunchao Zhang stat = cusparseSpMM(cusp->handle,opA,opB,mat->alpha_one, 2099afb2bd1cSJunchao Zhang mat->matDescr,mmdata->matBDescr,mat->beta_zero, 2100afb2bd1cSJunchao Zhang mmdata->matCDescr,cusparse_scalartype, 2101fcdce8c4SStefano Zampini cusp->spmmAlg,mmdata->mmBuffer);CHKERRCUSPARSE(stat); 2102afb2bd1cSJunchao Zhang #else 2103afb2bd1cSJunchao Zhang PetscInt k; 2104afb2bd1cSJunchao Zhang /* cusparseXcsrmm does not support transpose on B */ 2105ccdfe979SStefano Zampini if (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) { 2106ccdfe979SStefano Zampini cublasHandle_t cublasv2handle; 2107ccdfe979SStefano Zampini cublasStatus_t cerr; 2108ccdfe979SStefano Zampini 2109ccdfe979SStefano Zampini ierr = PetscCUBLASGetHandle(&cublasv2handle);CHKERRQ(ierr); 2110ccdfe979SStefano Zampini cerr = cublasXgeam(cublasv2handle,CUBLAS_OP_T,CUBLAS_OP_T, 2111ccdfe979SStefano Zampini B->cmap->n,B->rmap->n, 2112ccdfe979SStefano Zampini &PETSC_CUSPARSE_ONE ,barray,blda, 2113ccdfe979SStefano Zampini &PETSC_CUSPARSE_ZERO,barray,blda, 2114ccdfe979SStefano Zampini mmdata->Bt,B->cmap->n);CHKERRCUBLAS(cerr); 2115ccdfe979SStefano Zampini blda = B->cmap->n; 2116afb2bd1cSJunchao Zhang k = B->cmap->n; 2117afb2bd1cSJunchao Zhang } else { 2118afb2bd1cSJunchao Zhang k = B->rmap->n; 2119ccdfe979SStefano Zampini } 2120ccdfe979SStefano Zampini 2121afb2bd1cSJunchao Zhang /* perform the MatMat operation, op(A) is m x k, op(B) is k x n */ 2122ccdfe979SStefano Zampini stat = cusparse_csr_spmm(cusp->handle,opA,m,n,k, 2123afb2bd1cSJunchao Zhang csrmat->num_entries,mat->alpha_one,mat->descr, 2124ccdfe979SStefano Zampini csrmat->values->data().get(), 2125ccdfe979SStefano Zampini csrmat->row_offsets->data().get(), 2126ccdfe979SStefano Zampini csrmat->column_indices->data().get(), 2127ccdfe979SStefano Zampini mmdata->Bt ? mmdata->Bt : barray,blda,mat->beta_zero, 2128ccdfe979SStefano Zampini carray,clda);CHKERRCUSPARSE(stat); 2129afb2bd1cSJunchao Zhang #endif 2130c8378d12SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2131c8378d12SStefano Zampini ierr = PetscLogGpuFlops(n*2.0*csrmat->num_entries);CHKERRQ(ierr); 2132ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayRead(B,&barray);CHKERRQ(ierr); 2133ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt) { 2134ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayWrite(mmdata->X,&carray);CHKERRQ(ierr); 2135ccdfe979SStefano Zampini ierr = MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Private(B,mmdata->X,C,PETSC_FALSE,PETSC_FALSE);CHKERRQ(ierr); 2136ccdfe979SStefano Zampini } else if (product->type == MATPRODUCT_PtAP) { 2137ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayWrite(mmdata->X,&carray);CHKERRQ(ierr); 2138ccdfe979SStefano Zampini ierr = MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Private(B,mmdata->X,C,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr); 2139ccdfe979SStefano Zampini } else { 2140ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayWrite(C,&carray);CHKERRQ(ierr); 2141ccdfe979SStefano Zampini } 2142ccdfe979SStefano Zampini if (mmdata->cisdense) { 2143ccdfe979SStefano Zampini ierr = MatConvert(C,MATSEQDENSE,MAT_INPLACE_MATRIX,&C);CHKERRQ(ierr); 2144ccdfe979SStefano Zampini } 2145ccdfe979SStefano Zampini if (!biscuda) { 2146ccdfe979SStefano Zampini ierr = MatConvert(B,MATSEQDENSE,MAT_INPLACE_MATRIX,&B);CHKERRQ(ierr); 2147ccdfe979SStefano Zampini } 2148ccdfe979SStefano Zampini PetscFunctionReturn(0); 2149ccdfe979SStefano Zampini } 2150ccdfe979SStefano Zampini 2151ccdfe979SStefano Zampini static PetscErrorCode MatProductSymbolic_SeqAIJCUSPARSE_SeqDENSECUDA(Mat C) 2152ccdfe979SStefano Zampini { 2153ccdfe979SStefano Zampini Mat_Product *product = C->product; 2154ccdfe979SStefano Zampini Mat A,B; 2155ccdfe979SStefano Zampini PetscInt m,n; 2156ccdfe979SStefano Zampini PetscBool cisdense,flg; 2157ccdfe979SStefano Zampini PetscErrorCode ierr; 2158ccdfe979SStefano Zampini MatMatCusparse *mmdata; 2159ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSE *cusp; 2160ccdfe979SStefano Zampini 2161ccdfe979SStefano Zampini PetscFunctionBegin; 2162ccdfe979SStefano Zampini MatCheckProduct(C,1); 2163e8d2b73aSMark Adams if (C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data not empty"); 2164ccdfe979SStefano Zampini A = product->A; 2165ccdfe979SStefano Zampini B = product->B; 2166ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2167e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 2168ccdfe979SStefano Zampini cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2169e8d2b73aSMark Adams if (cusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2170ccdfe979SStefano Zampini switch (product->type) { 2171ccdfe979SStefano Zampini case MATPRODUCT_AB: 2172ccdfe979SStefano Zampini m = A->rmap->n; 2173ccdfe979SStefano Zampini n = B->cmap->n; 2174ccdfe979SStefano Zampini break; 2175ccdfe979SStefano Zampini case MATPRODUCT_AtB: 2176ccdfe979SStefano Zampini m = A->cmap->n; 2177ccdfe979SStefano Zampini n = B->cmap->n; 2178ccdfe979SStefano Zampini break; 2179ccdfe979SStefano Zampini case MATPRODUCT_ABt: 2180ccdfe979SStefano Zampini m = A->rmap->n; 2181ccdfe979SStefano Zampini n = B->rmap->n; 2182ccdfe979SStefano Zampini break; 2183ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 2184ccdfe979SStefano Zampini m = B->cmap->n; 2185ccdfe979SStefano Zampini n = B->cmap->n; 2186ccdfe979SStefano Zampini break; 2187ccdfe979SStefano Zampini case MATPRODUCT_RARt: 2188ccdfe979SStefano Zampini m = B->rmap->n; 2189ccdfe979SStefano Zampini n = B->rmap->n; 2190ccdfe979SStefano Zampini break; 2191ccdfe979SStefano Zampini default: 2192e8d2b73aSMark Adams SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 2193ccdfe979SStefano Zampini } 2194ccdfe979SStefano Zampini ierr = MatSetSizes(C,m,n,m,n);CHKERRQ(ierr); 2195ccdfe979SStefano Zampini /* if C is of type MATSEQDENSE (CPU), perform the operation on the GPU and then copy on the CPU */ 2196ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)C,MATSEQDENSE,&cisdense);CHKERRQ(ierr); 2197ccdfe979SStefano Zampini ierr = MatSetType(C,MATSEQDENSECUDA);CHKERRQ(ierr); 2198ccdfe979SStefano Zampini 2199ccdfe979SStefano Zampini /* product data */ 2200ccdfe979SStefano Zampini ierr = PetscNew(&mmdata);CHKERRQ(ierr); 2201ccdfe979SStefano Zampini mmdata->cisdense = cisdense; 2202afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_LT(11,0,0) 2203afb2bd1cSJunchao Zhang /* cusparseXcsrmm does not support transpose on B, so we allocate buffer to store B^T */ 2204ccdfe979SStefano Zampini if (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) { 2205afb2bd1cSJunchao Zhang cudaError_t cerr = cudaMalloc((void**)&mmdata->Bt,(size_t)B->rmap->n*(size_t)B->cmap->n*sizeof(PetscScalar));CHKERRCUDA(cerr); 2206ccdfe979SStefano Zampini } 2207afb2bd1cSJunchao Zhang #endif 2208ccdfe979SStefano Zampini /* for these products we need intermediate storage */ 2209ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt || product->type == MATPRODUCT_PtAP) { 2210ccdfe979SStefano Zampini ierr = MatCreate(PetscObjectComm((PetscObject)C),&mmdata->X);CHKERRQ(ierr); 2211ccdfe979SStefano Zampini ierr = MatSetType(mmdata->X,MATSEQDENSECUDA);CHKERRQ(ierr); 2212ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt) { /* do not preallocate, since the first call to MatDenseCUDAGetArray will preallocate on the GPU for us */ 2213ccdfe979SStefano Zampini ierr = MatSetSizes(mmdata->X,A->rmap->n,B->rmap->n,A->rmap->n,B->rmap->n);CHKERRQ(ierr); 2214ccdfe979SStefano Zampini } else { 2215ccdfe979SStefano Zampini ierr = MatSetSizes(mmdata->X,A->rmap->n,B->cmap->n,A->rmap->n,B->cmap->n);CHKERRQ(ierr); 2216ccdfe979SStefano Zampini } 2217ccdfe979SStefano Zampini } 2218ccdfe979SStefano Zampini C->product->data = mmdata; 2219ccdfe979SStefano Zampini C->product->destroy = MatDestroy_MatMatCusparse; 2220ccdfe979SStefano Zampini 2221ccdfe979SStefano Zampini C->ops->productnumeric = MatProductNumeric_SeqAIJCUSPARSE_SeqDENSECUDA; 2222ccdfe979SStefano Zampini PetscFunctionReturn(0); 2223ccdfe979SStefano Zampini } 2224ccdfe979SStefano Zampini 2225fcdce8c4SStefano Zampini static PetscErrorCode MatProductNumeric_SeqAIJCUSPARSE_SeqAIJCUSPARSE(Mat C) 2226ccdfe979SStefano Zampini { 2227ccdfe979SStefano Zampini Mat_Product *product = C->product; 2228fcdce8c4SStefano Zampini Mat A,B; 2229fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp,*Bcusp,*Ccusp; 2230fcdce8c4SStefano Zampini Mat_SeqAIJ *c = (Mat_SeqAIJ*)C->data; 2231fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Amat,*Bmat,*Cmat; 2232fcdce8c4SStefano Zampini CsrMatrix *Acsr,*Bcsr,*Ccsr; 2233fcdce8c4SStefano Zampini PetscBool flg; 2234ccdfe979SStefano Zampini PetscErrorCode ierr; 2235fcdce8c4SStefano Zampini cusparseStatus_t stat; 2236fcdce8c4SStefano Zampini cudaError_t cerr; 2237fcdce8c4SStefano Zampini MatProductType ptype; 2238fcdce8c4SStefano Zampini MatMatCusparse *mmdata; 2239fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2240fcdce8c4SStefano Zampini cusparseSpMatDescr_t BmatSpDescr; 2241fcdce8c4SStefano Zampini #endif 2242ccdfe979SStefano Zampini 2243ccdfe979SStefano Zampini PetscFunctionBegin; 2244ccdfe979SStefano Zampini MatCheckProduct(C,1); 2245e8d2b73aSMark Adams if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data empty"); 2246fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)C,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2247e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for C of type %s",((PetscObject)C)->type_name); 2248fcdce8c4SStefano Zampini mmdata = (MatMatCusparse*)C->product->data; 2249fcdce8c4SStefano Zampini A = product->A; 2250fcdce8c4SStefano Zampini B = product->B; 2251fcdce8c4SStefano Zampini if (mmdata->reusesym) { /* this happens when api_user is true, meaning that the matrix values have been already computed in the MatProductSymbolic phase */ 2252fcdce8c4SStefano Zampini mmdata->reusesym = PETSC_FALSE; 2253fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)C->spptr; 2254e8d2b73aSMark Adams if (Ccusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2255fcdce8c4SStefano Zampini Cmat = Ccusp->mat; 2256e8d2b73aSMark Adams if (!Cmat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C mult struct for product type %s",MatProductTypes[C->product->type]); 2257fcdce8c4SStefano Zampini Ccsr = (CsrMatrix*)Cmat->mat; 2258e8d2b73aSMark Adams if (!Ccsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C CSR struct"); 2259fcdce8c4SStefano Zampini goto finalize; 2260fcdce8c4SStefano Zampini } 2261fcdce8c4SStefano Zampini if (!c->nz) goto finalize; 2262fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2263e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 2264fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)B,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2265e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for B of type %s",((PetscObject)B)->type_name); 2266fcdce8c4SStefano Zampini if (A->boundtocpu) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_ARG_WRONG,"Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 2267fcdce8c4SStefano Zampini if (B->boundtocpu) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_ARG_WRONG,"Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 2268fcdce8c4SStefano Zampini Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2269fcdce8c4SStefano Zampini Bcusp = (Mat_SeqAIJCUSPARSE*)B->spptr; 2270fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)C->spptr; 2271e8d2b73aSMark Adams if (Acusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2272e8d2b73aSMark Adams if (Bcusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2273e8d2b73aSMark Adams if (Ccusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2274fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 2275fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 2276fcdce8c4SStefano Zampini 2277fcdce8c4SStefano Zampini ptype = product->type; 2278fcdce8c4SStefano Zampini if (A->symmetric && ptype == MATPRODUCT_AtB) ptype = MATPRODUCT_AB; 2279fcdce8c4SStefano Zampini if (B->symmetric && ptype == MATPRODUCT_ABt) ptype = MATPRODUCT_AB; 2280fcdce8c4SStefano Zampini switch (ptype) { 2281fcdce8c4SStefano Zampini case MATPRODUCT_AB: 2282fcdce8c4SStefano Zampini Amat = Acusp->mat; 2283fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2284fcdce8c4SStefano Zampini break; 2285fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 2286fcdce8c4SStefano Zampini Amat = Acusp->matTranspose; 2287fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2288fcdce8c4SStefano Zampini break; 2289fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 2290fcdce8c4SStefano Zampini Amat = Acusp->mat; 2291fcdce8c4SStefano Zampini Bmat = Bcusp->matTranspose; 2292fcdce8c4SStefano Zampini break; 2293fcdce8c4SStefano Zampini default: 2294e8d2b73aSMark Adams SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 2295fcdce8c4SStefano Zampini } 2296fcdce8c4SStefano Zampini Cmat = Ccusp->mat; 2297e8d2b73aSMark Adams if (!Amat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A mult struct for product type %s",MatProductTypes[ptype]); 2298e8d2b73aSMark Adams if (!Bmat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B mult struct for product type %s",MatProductTypes[ptype]); 2299e8d2b73aSMark Adams if (!Cmat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C mult struct for product type %s",MatProductTypes[ptype]); 2300fcdce8c4SStefano Zampini Acsr = (CsrMatrix*)Amat->mat; 2301fcdce8c4SStefano Zampini Bcsr = mmdata->Bcsr ? mmdata->Bcsr : (CsrMatrix*)Bmat->mat; /* B may be in compressed row storage */ 2302fcdce8c4SStefano Zampini Ccsr = (CsrMatrix*)Cmat->mat; 2303e8d2b73aSMark Adams if (!Acsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A CSR struct"); 2304e8d2b73aSMark Adams if (!Bcsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B CSR struct"); 2305e8d2b73aSMark Adams if (!Ccsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C CSR struct"); 2306fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2307fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2308fcdce8c4SStefano Zampini BmatSpDescr = mmdata->Bcsr ? mmdata->matSpBDescr : Bmat->matDescr; /* B may be in compressed row storage */ 2309fcdce8c4SStefano Zampini stat = cusparseSpGEMM_compute(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2310fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2311fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2312fcdce8c4SStefano Zampini mmdata->spgemmDesc, &mmdata->mmBufferSize, mmdata->mmBuffer);CHKERRCUSPARSE(stat); 2313fcdce8c4SStefano Zampini stat = cusparseSpGEMM_copy(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2314fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2315fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc);CHKERRCUSPARSE(stat); 2316fcdce8c4SStefano Zampini #else 2317fcdce8c4SStefano Zampini stat = cusparse_csr_spgemm(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2318fcdce8c4SStefano Zampini Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, 2319fcdce8c4SStefano Zampini Amat->descr, Acsr->num_entries, Acsr->values->data().get(), Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), 2320fcdce8c4SStefano Zampini Bmat->descr, Bcsr->num_entries, Bcsr->values->data().get(), Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2321fcdce8c4SStefano Zampini Cmat->descr, Ccsr->values->data().get(), Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get());CHKERRCUSPARSE(stat); 2322fcdce8c4SStefano Zampini #endif 2323fcdce8c4SStefano Zampini ierr = PetscLogGpuFlops(mmdata->flops);CHKERRQ(ierr); 2324fcdce8c4SStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 2325fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2326fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_GPU; 2327fcdce8c4SStefano Zampini finalize: 2328fcdce8c4SStefano Zampini /* shorter version of MatAssemblyEnd_SeqAIJ */ 2329fcdce8c4SStefano Zampini ierr = PetscInfo3(C,"Matrix size: %D X %D; storage space: 0 unneeded,%D used\n",C->rmap->n,C->cmap->n,c->nz);CHKERRQ(ierr); 2330fcdce8c4SStefano Zampini ierr = PetscInfo(C,"Number of mallocs during MatSetValues() is 0\n");CHKERRQ(ierr); 2331fcdce8c4SStefano Zampini ierr = PetscInfo1(C,"Maximum nonzeros in any row is %D\n",c->rmax);CHKERRQ(ierr); 2332fcdce8c4SStefano Zampini c->reallocs = 0; 2333fcdce8c4SStefano Zampini C->info.mallocs += 0; 2334fcdce8c4SStefano Zampini C->info.nz_unneeded = 0; 2335fcdce8c4SStefano Zampini C->assembled = C->was_assembled = PETSC_TRUE; 2336fcdce8c4SStefano Zampini C->num_ass++; 2337ccdfe979SStefano Zampini PetscFunctionReturn(0); 2338ccdfe979SStefano Zampini } 2339fcdce8c4SStefano Zampini 2340fcdce8c4SStefano Zampini static PetscErrorCode MatProductSymbolic_SeqAIJCUSPARSE_SeqAIJCUSPARSE(Mat C) 2341fcdce8c4SStefano Zampini { 2342fcdce8c4SStefano Zampini Mat_Product *product = C->product; 2343fcdce8c4SStefano Zampini Mat A,B; 2344fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp,*Bcusp,*Ccusp; 2345fcdce8c4SStefano Zampini Mat_SeqAIJ *a,*b,*c; 2346fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Amat,*Bmat,*Cmat; 2347fcdce8c4SStefano Zampini CsrMatrix *Acsr,*Bcsr,*Ccsr; 2348fcdce8c4SStefano Zampini PetscInt i,j,m,n,k; 2349fcdce8c4SStefano Zampini PetscBool flg; 2350fcdce8c4SStefano Zampini PetscErrorCode ierr; 2351fcdce8c4SStefano Zampini cusparseStatus_t stat; 2352fcdce8c4SStefano Zampini cudaError_t cerr; 2353fcdce8c4SStefano Zampini MatProductType ptype; 2354fcdce8c4SStefano Zampini MatMatCusparse *mmdata; 2355fcdce8c4SStefano Zampini PetscLogDouble flops; 2356fcdce8c4SStefano Zampini PetscBool biscompressed,ciscompressed; 2357fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2358fcdce8c4SStefano Zampini int64_t C_num_rows1, C_num_cols1, C_nnz1; 2359fcdce8c4SStefano Zampini size_t bufSize2; 2360fcdce8c4SStefano Zampini cusparseSpMatDescr_t BmatSpDescr; 2361fcdce8c4SStefano Zampini #else 2362fcdce8c4SStefano Zampini int cnz; 2363fcdce8c4SStefano Zampini #endif 2364fcdce8c4SStefano Zampini 2365fcdce8c4SStefano Zampini PetscFunctionBegin; 2366fcdce8c4SStefano Zampini MatCheckProduct(C,1); 2367e8d2b73aSMark Adams if (C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data not empty"); 2368fcdce8c4SStefano Zampini A = product->A; 2369fcdce8c4SStefano Zampini B = product->B; 2370fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2371e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 2372fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)B,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2373e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for B of type %s",((PetscObject)B)->type_name); 2374fcdce8c4SStefano Zampini a = (Mat_SeqAIJ*)A->data; 2375fcdce8c4SStefano Zampini b = (Mat_SeqAIJ*)B->data; 2376fcdce8c4SStefano Zampini Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2377fcdce8c4SStefano Zampini Bcusp = (Mat_SeqAIJCUSPARSE*)B->spptr; 2378e8d2b73aSMark Adams if (Acusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2379e8d2b73aSMark Adams if (Bcusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2380fcdce8c4SStefano Zampini 2381fcdce8c4SStefano Zampini /* product data */ 2382fcdce8c4SStefano Zampini ierr = PetscNew(&mmdata);CHKERRQ(ierr); 2383fcdce8c4SStefano Zampini C->product->data = mmdata; 2384fcdce8c4SStefano Zampini C->product->destroy = MatDestroy_MatMatCusparse; 2385fcdce8c4SStefano Zampini 2386fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 2387fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 2388fcdce8c4SStefano Zampini ptype = product->type; 2389fcdce8c4SStefano Zampini if (A->symmetric && ptype == MATPRODUCT_AtB) ptype = MATPRODUCT_AB; 2390fcdce8c4SStefano Zampini if (B->symmetric && ptype == MATPRODUCT_ABt) ptype = MATPRODUCT_AB; 2391fcdce8c4SStefano Zampini biscompressed = PETSC_FALSE; 2392fcdce8c4SStefano Zampini ciscompressed = PETSC_FALSE; 2393fcdce8c4SStefano Zampini switch (ptype) { 2394fcdce8c4SStefano Zampini case MATPRODUCT_AB: 2395fcdce8c4SStefano Zampini m = A->rmap->n; 2396fcdce8c4SStefano Zampini n = B->cmap->n; 2397fcdce8c4SStefano Zampini k = A->cmap->n; 2398fcdce8c4SStefano Zampini Amat = Acusp->mat; 2399fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2400fcdce8c4SStefano Zampini if (a->compressedrow.use) ciscompressed = PETSC_TRUE; 2401fcdce8c4SStefano Zampini if (b->compressedrow.use) biscompressed = PETSC_TRUE; 2402fcdce8c4SStefano Zampini break; 2403fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 2404fcdce8c4SStefano Zampini m = A->cmap->n; 2405fcdce8c4SStefano Zampini n = B->cmap->n; 2406fcdce8c4SStefano Zampini k = A->rmap->n; 24071a2c6b5cSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTransposeForMult(A);CHKERRQ(ierr); 2408fcdce8c4SStefano Zampini Amat = Acusp->matTranspose; 2409fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2410fcdce8c4SStefano Zampini if (b->compressedrow.use) biscompressed = PETSC_TRUE; 2411fcdce8c4SStefano Zampini break; 2412fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 2413fcdce8c4SStefano Zampini m = A->rmap->n; 2414fcdce8c4SStefano Zampini n = B->rmap->n; 2415fcdce8c4SStefano Zampini k = A->cmap->n; 24161a2c6b5cSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTransposeForMult(B);CHKERRQ(ierr); 2417fcdce8c4SStefano Zampini Amat = Acusp->mat; 2418fcdce8c4SStefano Zampini Bmat = Bcusp->matTranspose; 2419fcdce8c4SStefano Zampini if (a->compressedrow.use) ciscompressed = PETSC_TRUE; 2420fcdce8c4SStefano Zampini break; 2421fcdce8c4SStefano Zampini default: 2422e8d2b73aSMark Adams SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 2423fcdce8c4SStefano Zampini } 2424fcdce8c4SStefano Zampini 2425fcdce8c4SStefano Zampini /* create cusparse matrix */ 2426fcdce8c4SStefano Zampini ierr = MatSetSizes(C,m,n,m,n);CHKERRQ(ierr); 2427fcdce8c4SStefano Zampini ierr = MatSetType(C,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 2428fcdce8c4SStefano Zampini c = (Mat_SeqAIJ*)C->data; 2429fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)C->spptr; 2430fcdce8c4SStefano Zampini Cmat = new Mat_SeqAIJCUSPARSEMultStruct; 2431fcdce8c4SStefano Zampini Ccsr = new CsrMatrix; 2432fcdce8c4SStefano Zampini 2433fcdce8c4SStefano Zampini c->compressedrow.use = ciscompressed; 2434fcdce8c4SStefano Zampini if (c->compressedrow.use) { /* if a is in compressed row, than c will be in compressed row format */ 2435fcdce8c4SStefano Zampini c->compressedrow.nrows = a->compressedrow.nrows; 2436fcdce8c4SStefano Zampini ierr = PetscMalloc2(c->compressedrow.nrows+1,&c->compressedrow.i,c->compressedrow.nrows,&c->compressedrow.rindex);CHKERRQ(ierr); 2437fcdce8c4SStefano Zampini ierr = PetscArraycpy(c->compressedrow.rindex,a->compressedrow.rindex,c->compressedrow.nrows);CHKERRQ(ierr); 2438fcdce8c4SStefano Zampini Ccusp->workVector = new THRUSTARRAY(c->compressedrow.nrows); 2439fcdce8c4SStefano Zampini Cmat->cprowIndices = new THRUSTINTARRAY(c->compressedrow.nrows); 2440fcdce8c4SStefano Zampini Cmat->cprowIndices->assign(c->compressedrow.rindex,c->compressedrow.rindex + c->compressedrow.nrows); 2441fcdce8c4SStefano Zampini } else { 2442fcdce8c4SStefano Zampini c->compressedrow.nrows = 0; 2443fcdce8c4SStefano Zampini c->compressedrow.i = NULL; 2444fcdce8c4SStefano Zampini c->compressedrow.rindex = NULL; 2445fcdce8c4SStefano Zampini Ccusp->workVector = NULL; 2446fcdce8c4SStefano Zampini Cmat->cprowIndices = NULL; 2447fcdce8c4SStefano Zampini } 2448fcdce8c4SStefano Zampini Ccusp->nrows = ciscompressed ? c->compressedrow.nrows : m; 2449fcdce8c4SStefano Zampini Ccusp->mat = Cmat; 2450fcdce8c4SStefano Zampini Ccusp->mat->mat = Ccsr; 2451fcdce8c4SStefano Zampini Ccsr->num_rows = Ccusp->nrows; 2452fcdce8c4SStefano Zampini Ccsr->num_cols = n; 2453fcdce8c4SStefano Zampini Ccsr->row_offsets = new THRUSTINTARRAY32(Ccusp->nrows+1); 2454fcdce8c4SStefano Zampini stat = cusparseCreateMatDescr(&Cmat->descr);CHKERRCUSPARSE(stat); 2455fcdce8c4SStefano Zampini stat = cusparseSetMatIndexBase(Cmat->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 2456fcdce8c4SStefano Zampini stat = cusparseSetMatType(Cmat->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 2457fcdce8c4SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->alpha_one),sizeof(PetscScalar));CHKERRCUDA(cerr); 2458fcdce8c4SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_zero),sizeof(PetscScalar));CHKERRCUDA(cerr); 2459fcdce8c4SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_one), sizeof(PetscScalar));CHKERRCUDA(cerr); 2460fcdce8c4SStefano Zampini cerr = cudaMemcpy(Cmat->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 2461fcdce8c4SStefano Zampini cerr = cudaMemcpy(Cmat->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 2462fcdce8c4SStefano Zampini cerr = cudaMemcpy(Cmat->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 2463fcdce8c4SStefano Zampini if (!Ccsr->num_rows || !Ccsr->num_cols || !a->nz || !b->nz) { /* cusparse raise errors in different calls when matrices have zero rows/columns! */ 2464fcdce8c4SStefano Zampini thrust::fill(thrust::device,Ccsr->row_offsets->begin(),Ccsr->row_offsets->end(),0); 2465fcdce8c4SStefano Zampini c->nz = 0; 2466fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 2467fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 2468fcdce8c4SStefano Zampini goto finalizesym; 2469fcdce8c4SStefano Zampini } 2470fcdce8c4SStefano Zampini 2471e8d2b73aSMark Adams if (!Amat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A mult struct for product type %s",MatProductTypes[ptype]); 2472e8d2b73aSMark Adams if (!Bmat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B mult struct for product type %s",MatProductTypes[ptype]); 2473fcdce8c4SStefano Zampini Acsr = (CsrMatrix*)Amat->mat; 2474fcdce8c4SStefano Zampini if (!biscompressed) { 2475fcdce8c4SStefano Zampini Bcsr = (CsrMatrix*)Bmat->mat; 2476fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2477fcdce8c4SStefano Zampini BmatSpDescr = Bmat->matDescr; 2478fcdce8c4SStefano Zampini #endif 2479fcdce8c4SStefano Zampini } else { /* we need to use row offsets for the full matrix */ 2480fcdce8c4SStefano Zampini CsrMatrix *cBcsr = (CsrMatrix*)Bmat->mat; 2481fcdce8c4SStefano Zampini Bcsr = new CsrMatrix; 2482fcdce8c4SStefano Zampini Bcsr->num_rows = B->rmap->n; 2483fcdce8c4SStefano Zampini Bcsr->num_cols = cBcsr->num_cols; 2484fcdce8c4SStefano Zampini Bcsr->num_entries = cBcsr->num_entries; 2485fcdce8c4SStefano Zampini Bcsr->column_indices = cBcsr->column_indices; 2486fcdce8c4SStefano Zampini Bcsr->values = cBcsr->values; 2487fcdce8c4SStefano Zampini if (!Bcusp->rowoffsets_gpu) { 2488fcdce8c4SStefano Zampini Bcusp->rowoffsets_gpu = new THRUSTINTARRAY32(B->rmap->n + 1); 2489fcdce8c4SStefano Zampini Bcusp->rowoffsets_gpu->assign(b->i,b->i + B->rmap->n + 1); 2490fcdce8c4SStefano Zampini ierr = PetscLogCpuToGpu((B->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 2491fcdce8c4SStefano Zampini } 2492fcdce8c4SStefano Zampini Bcsr->row_offsets = Bcusp->rowoffsets_gpu; 2493fcdce8c4SStefano Zampini mmdata->Bcsr = Bcsr; 2494fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2495fcdce8c4SStefano Zampini if (Bcsr->num_rows && Bcsr->num_cols) { 2496fcdce8c4SStefano Zampini stat = cusparseCreateCsr(&mmdata->matSpBDescr, Bcsr->num_rows, Bcsr->num_cols, Bcsr->num_entries, 2497fcdce8c4SStefano Zampini Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2498fcdce8c4SStefano Zampini Bcsr->values->data().get(), 2499fcdce8c4SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 2500fcdce8c4SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 2501fcdce8c4SStefano Zampini } 2502fcdce8c4SStefano Zampini BmatSpDescr = mmdata->matSpBDescr; 2503fcdce8c4SStefano Zampini #endif 2504fcdce8c4SStefano Zampini } 2505e8d2b73aSMark Adams if (!Acsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A CSR struct"); 2506e8d2b73aSMark Adams if (!Bcsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B CSR struct"); 2507fcdce8c4SStefano Zampini /* precompute flops count */ 2508fcdce8c4SStefano Zampini if (ptype == MATPRODUCT_AB) { 2509fcdce8c4SStefano Zampini for (i=0, flops = 0; i<A->rmap->n; i++) { 2510fcdce8c4SStefano Zampini const PetscInt st = a->i[i]; 2511fcdce8c4SStefano Zampini const PetscInt en = a->i[i+1]; 2512fcdce8c4SStefano Zampini for (j=st; j<en; j++) { 2513fcdce8c4SStefano Zampini const PetscInt brow = a->j[j]; 2514fcdce8c4SStefano Zampini flops += 2.*(b->i[brow+1] - b->i[brow]); 2515fcdce8c4SStefano Zampini } 2516fcdce8c4SStefano Zampini } 2517fcdce8c4SStefano Zampini } else if (ptype == MATPRODUCT_AtB) { 2518fcdce8c4SStefano Zampini for (i=0, flops = 0; i<A->rmap->n; i++) { 2519fcdce8c4SStefano Zampini const PetscInt anzi = a->i[i+1] - a->i[i]; 2520fcdce8c4SStefano Zampini const PetscInt bnzi = b->i[i+1] - b->i[i]; 2521fcdce8c4SStefano Zampini flops += (2.*anzi)*bnzi; 2522fcdce8c4SStefano Zampini } 2523fcdce8c4SStefano Zampini } else { /* TODO */ 2524fcdce8c4SStefano Zampini flops = 0.; 2525fcdce8c4SStefano Zampini } 2526fcdce8c4SStefano Zampini 2527fcdce8c4SStefano Zampini mmdata->flops = flops; 2528fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2529fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2530fcdce8c4SStefano Zampini stat = cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 2531fcdce8c4SStefano Zampini stat = cusparseCreateCsr(&Cmat->matDescr, Ccsr->num_rows, Ccsr->num_cols, 0, 2532fcdce8c4SStefano Zampini NULL, NULL, NULL, 2533fcdce8c4SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 2534fcdce8c4SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 2535fcdce8c4SStefano Zampini stat = cusparseSpGEMM_createDescr(&mmdata->spgemmDesc);CHKERRCUSPARSE(stat); 2536fcdce8c4SStefano Zampini /* ask bufferSize bytes for external memory */ 2537fcdce8c4SStefano Zampini stat = cusparseSpGEMM_workEstimation(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2538fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2539fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2540fcdce8c4SStefano Zampini mmdata->spgemmDesc, &bufSize2, NULL);CHKERRCUSPARSE(stat); 2541bfcc3627SStefano Zampini cerr = cudaMalloc((void**) &mmdata->mmBuffer2, bufSize2);CHKERRCUDA(cerr); 2542fcdce8c4SStefano Zampini /* inspect the matrices A and B to understand the memory requirement for the next step */ 2543fcdce8c4SStefano Zampini stat = cusparseSpGEMM_workEstimation(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2544fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2545fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2546fcdce8c4SStefano Zampini mmdata->spgemmDesc, &bufSize2, mmdata->mmBuffer2);CHKERRCUSPARSE(stat); 2547fcdce8c4SStefano Zampini /* ask bufferSize again bytes for external memory */ 2548fcdce8c4SStefano Zampini stat = cusparseSpGEMM_compute(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2549fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2550fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2551fcdce8c4SStefano Zampini mmdata->spgemmDesc, &mmdata->mmBufferSize, NULL);CHKERRCUSPARSE(stat); 2552fcdce8c4SStefano Zampini /* The CUSPARSE documentation is not clear, nor the API 2553fcdce8c4SStefano Zampini We need both buffers to perform the operations properly! 2554fcdce8c4SStefano Zampini mmdata->mmBuffer2 does not appear anywhere in the compute/copy API 2555fcdce8c4SStefano Zampini it only appears for the workEstimation stuff, but it seems it is needed in compute, so probably the address 2556fcdce8c4SStefano Zampini is stored in the descriptor! What a messy API... */ 2557bfcc3627SStefano Zampini cerr = cudaMalloc((void**) &mmdata->mmBuffer, mmdata->mmBufferSize);CHKERRCUDA(cerr); 2558fcdce8c4SStefano Zampini /* compute the intermediate product of A * B */ 2559fcdce8c4SStefano Zampini stat = cusparseSpGEMM_compute(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2560fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2561fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2562fcdce8c4SStefano Zampini mmdata->spgemmDesc, &mmdata->mmBufferSize, mmdata->mmBuffer);CHKERRCUSPARSE(stat); 2563fcdce8c4SStefano Zampini /* get matrix C non-zero entries C_nnz1 */ 2564fcdce8c4SStefano Zampini stat = cusparseSpMatGetSize(Cmat->matDescr, &C_num_rows1, &C_num_cols1, &C_nnz1);CHKERRCUSPARSE(stat); 2565fcdce8c4SStefano Zampini c->nz = (PetscInt) C_nnz1; 256600702c57SStefano Zampini ierr = PetscInfo9(C,"Buffer sizes for type %s, result %D x %D (k %D, nzA %D, nzB %D, nzC %D) are: %ldKB %ldKB\n",MatProductTypes[ptype],m,n,k,a->nz,b->nz,c->nz,bufSize2/1024,mmdata->mmBufferSize/1024);CHKERRQ(ierr); 2567fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 2568fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2569fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 2570fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2571fcdce8c4SStefano Zampini stat = cusparseCsrSetPointers(Cmat->matDescr, Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get(), 2572fcdce8c4SStefano Zampini Ccsr->values->data().get());CHKERRCUSPARSE(stat); 2573fcdce8c4SStefano Zampini stat = cusparseSpGEMM_copy(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2574fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2575fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc);CHKERRCUSPARSE(stat); 2576fcdce8c4SStefano Zampini #else 2577fcdce8c4SStefano Zampini stat = cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_HOST);CHKERRCUSPARSE(stat); 2578fcdce8c4SStefano Zampini stat = cusparseXcsrgemmNnz(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2579fcdce8c4SStefano Zampini Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, 2580fcdce8c4SStefano Zampini Amat->descr, Acsr->num_entries, Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), 2581fcdce8c4SStefano Zampini Bmat->descr, Bcsr->num_entries, Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2582fcdce8c4SStefano Zampini Cmat->descr, Ccsr->row_offsets->data().get(), &cnz);CHKERRCUSPARSE(stat); 2583fcdce8c4SStefano Zampini c->nz = cnz; 2584fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 2585fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2586fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 2587fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2588fcdce8c4SStefano Zampini 2589fcdce8c4SStefano Zampini stat = cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 2590fcdce8c4SStefano Zampini /* with the old gemm interface (removed from 11.0 on) we cannot compute the symbolic factorization only. 2591fcdce8c4SStefano Zampini I have tried using the gemm2 interface (alpha * A * B + beta * D), which allows to do symbolic by passing NULL for values, but it seems quite buggy when 2592fcdce8c4SStefano Zampini D is NULL, despite the fact that CUSPARSE documentation claims it is supported! */ 2593fcdce8c4SStefano Zampini stat = cusparse_csr_spgemm(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2594fcdce8c4SStefano Zampini Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, 2595fcdce8c4SStefano Zampini Amat->descr, Acsr->num_entries, Acsr->values->data().get(), Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), 2596fcdce8c4SStefano Zampini Bmat->descr, Bcsr->num_entries, Bcsr->values->data().get(), Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2597fcdce8c4SStefano Zampini Cmat->descr, Ccsr->values->data().get(), Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get());CHKERRCUSPARSE(stat); 2598fcdce8c4SStefano Zampini #endif 2599fcdce8c4SStefano Zampini ierr = PetscLogGpuFlops(mmdata->flops);CHKERRQ(ierr); 2600fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2601fcdce8c4SStefano Zampini finalizesym: 2602fcdce8c4SStefano Zampini c->singlemalloc = PETSC_FALSE; 2603fcdce8c4SStefano Zampini c->free_a = PETSC_TRUE; 2604fcdce8c4SStefano Zampini c->free_ij = PETSC_TRUE; 2605fcdce8c4SStefano Zampini ierr = PetscMalloc1(m+1,&c->i);CHKERRQ(ierr); 2606fcdce8c4SStefano Zampini ierr = PetscMalloc1(c->nz,&c->j);CHKERRQ(ierr); 2607fcdce8c4SStefano Zampini if (PetscDefined(USE_64BIT_INDICES)) { /* 32 to 64 bit conversion on the GPU and then copy to host (lazy) */ 2608fcdce8c4SStefano Zampini PetscInt *d_i = c->i; 2609fcdce8c4SStefano Zampini THRUSTINTARRAY ii(Ccsr->row_offsets->size()); 2610fcdce8c4SStefano Zampini THRUSTINTARRAY jj(Ccsr->column_indices->size()); 2611fcdce8c4SStefano Zampini ii = *Ccsr->row_offsets; 2612fcdce8c4SStefano Zampini jj = *Ccsr->column_indices; 2613fcdce8c4SStefano Zampini if (ciscompressed) d_i = c->compressedrow.i; 2614fcdce8c4SStefano Zampini cerr = cudaMemcpy(d_i,ii.data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2615fcdce8c4SStefano Zampini cerr = cudaMemcpy(c->j,jj.data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2616fcdce8c4SStefano Zampini } else { 2617fcdce8c4SStefano Zampini PetscInt *d_i = c->i; 2618fcdce8c4SStefano Zampini if (ciscompressed) d_i = c->compressedrow.i; 2619fcdce8c4SStefano Zampini cerr = cudaMemcpy(d_i,Ccsr->row_offsets->data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2620fcdce8c4SStefano Zampini cerr = cudaMemcpy(c->j,Ccsr->column_indices->data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2621fcdce8c4SStefano Zampini } 2622fcdce8c4SStefano Zampini if (ciscompressed) { /* need to expand host row offsets */ 2623fcdce8c4SStefano Zampini PetscInt r = 0; 2624fcdce8c4SStefano Zampini c->i[0] = 0; 2625fcdce8c4SStefano Zampini for (k = 0; k < c->compressedrow.nrows; k++) { 2626fcdce8c4SStefano Zampini const PetscInt next = c->compressedrow.rindex[k]; 2627fcdce8c4SStefano Zampini const PetscInt old = c->compressedrow.i[k]; 2628fcdce8c4SStefano Zampini for (; r < next; r++) c->i[r+1] = old; 2629fcdce8c4SStefano Zampini } 2630fcdce8c4SStefano Zampini for (; r < m; r++) c->i[r+1] = c->compressedrow.i[c->compressedrow.nrows]; 2631fcdce8c4SStefano Zampini } 2632fcdce8c4SStefano Zampini ierr = PetscLogGpuToCpu((Ccsr->column_indices->size() + Ccsr->row_offsets->size())*sizeof(PetscInt));CHKERRQ(ierr); 2633fcdce8c4SStefano Zampini ierr = PetscMalloc1(m,&c->ilen);CHKERRQ(ierr); 2634fcdce8c4SStefano Zampini ierr = PetscMalloc1(m,&c->imax);CHKERRQ(ierr); 2635fcdce8c4SStefano Zampini c->maxnz = c->nz; 2636fcdce8c4SStefano Zampini c->nonzerorowcnt = 0; 2637fcdce8c4SStefano Zampini c->rmax = 0; 2638fcdce8c4SStefano Zampini for (k = 0; k < m; k++) { 2639fcdce8c4SStefano Zampini const PetscInt nn = c->i[k+1] - c->i[k]; 2640fcdce8c4SStefano Zampini c->ilen[k] = c->imax[k] = nn; 2641fcdce8c4SStefano Zampini c->nonzerorowcnt += (PetscInt)!!nn; 2642fcdce8c4SStefano Zampini c->rmax = PetscMax(c->rmax,nn); 2643fcdce8c4SStefano Zampini } 2644fcdce8c4SStefano Zampini ierr = MatMarkDiagonal_SeqAIJ(C);CHKERRQ(ierr); 2645fcdce8c4SStefano Zampini ierr = PetscMalloc1(c->nz,&c->a);CHKERRQ(ierr); 2646fcdce8c4SStefano Zampini Ccsr->num_entries = c->nz; 2647fcdce8c4SStefano Zampini 2648fcdce8c4SStefano Zampini C->nonzerostate++; 2649fcdce8c4SStefano Zampini ierr = PetscLayoutSetUp(C->rmap);CHKERRQ(ierr); 2650fcdce8c4SStefano Zampini ierr = PetscLayoutSetUp(C->cmap);CHKERRQ(ierr); 2651fcdce8c4SStefano Zampini Ccusp->nonzerostate = C->nonzerostate; 2652fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_UNALLOCATED; 2653fcdce8c4SStefano Zampini C->preallocated = PETSC_TRUE; 2654fcdce8c4SStefano Zampini C->assembled = PETSC_FALSE; 2655fcdce8c4SStefano Zampini C->was_assembled = PETSC_FALSE; 2656abb89eb1SStefano Zampini if (product->api_user && A->offloadmask == PETSC_OFFLOAD_BOTH && B->offloadmask == PETSC_OFFLOAD_BOTH) { /* flag the matrix C values as computed, so that the numeric phase will only call MatAssembly */ 2657fcdce8c4SStefano Zampini mmdata->reusesym = PETSC_TRUE; 2658fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_GPU; 2659fcdce8c4SStefano Zampini } 2660fcdce8c4SStefano Zampini C->ops->productnumeric = MatProductNumeric_SeqAIJCUSPARSE_SeqAIJCUSPARSE; 2661fcdce8c4SStefano Zampini PetscFunctionReturn(0); 2662fcdce8c4SStefano Zampini } 2663fcdce8c4SStefano Zampini 2664fcdce8c4SStefano Zampini PETSC_INTERN PetscErrorCode MatProductSetFromOptions_SeqAIJ_SeqDense(Mat); 2665fcdce8c4SStefano Zampini 2666fcdce8c4SStefano Zampini /* handles sparse or dense B */ 2667fcdce8c4SStefano Zampini static PetscErrorCode MatProductSetFromOptions_SeqAIJCUSPARSE(Mat mat) 2668fcdce8c4SStefano Zampini { 2669fcdce8c4SStefano Zampini Mat_Product *product = mat->product; 2670fcdce8c4SStefano Zampini PetscErrorCode ierr; 2671fcdce8c4SStefano Zampini PetscBool isdense = PETSC_FALSE,Biscusp = PETSC_FALSE,Ciscusp = PETSC_TRUE; 2672fcdce8c4SStefano Zampini 2673fcdce8c4SStefano Zampini PetscFunctionBegin; 2674fcdce8c4SStefano Zampini MatCheckProduct(mat,1); 2675fcdce8c4SStefano Zampini ierr = PetscObjectBaseTypeCompare((PetscObject)product->B,MATSEQDENSE,&isdense);CHKERRQ(ierr); 2676abb89eb1SStefano Zampini if (!product->A->boundtocpu && !product->B->boundtocpu) { 2677fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)product->B,MATSEQAIJCUSPARSE,&Biscusp);CHKERRQ(ierr); 2678fcdce8c4SStefano Zampini } 2679fcdce8c4SStefano Zampini if (product->type == MATPRODUCT_ABC) { 2680fcdce8c4SStefano Zampini Ciscusp = PETSC_FALSE; 2681fcdce8c4SStefano Zampini if (!product->C->boundtocpu) { 2682fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)product->C,MATSEQAIJCUSPARSE,&Ciscusp);CHKERRQ(ierr); 2683fcdce8c4SStefano Zampini } 2684fcdce8c4SStefano Zampini } 2685fcdce8c4SStefano Zampini if (isdense) { 2686ccdfe979SStefano Zampini switch (product->type) { 2687ccdfe979SStefano Zampini case MATPRODUCT_AB: 2688ccdfe979SStefano Zampini case MATPRODUCT_AtB: 2689ccdfe979SStefano Zampini case MATPRODUCT_ABt: 2690ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 2691ccdfe979SStefano Zampini case MATPRODUCT_RARt: 2692fcdce8c4SStefano Zampini if (product->A->boundtocpu) { 2693fcdce8c4SStefano Zampini ierr = MatProductSetFromOptions_SeqAIJ_SeqDense(mat);CHKERRQ(ierr); 2694fcdce8c4SStefano Zampini } else { 2695fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_SeqAIJCUSPARSE_SeqDENSECUDA; 2696fcdce8c4SStefano Zampini } 2697fcdce8c4SStefano Zampini break; 2698fcdce8c4SStefano Zampini case MATPRODUCT_ABC: 2699fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_ABC_Basic; 2700fcdce8c4SStefano Zampini break; 2701ccdfe979SStefano Zampini default: 2702ccdfe979SStefano Zampini break; 2703ccdfe979SStefano Zampini } 2704fcdce8c4SStefano Zampini } else if (Biscusp && Ciscusp) { 2705fcdce8c4SStefano Zampini switch (product->type) { 2706fcdce8c4SStefano Zampini case MATPRODUCT_AB: 2707fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 2708fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 2709fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_SeqAIJCUSPARSE_SeqAIJCUSPARSE; 2710fcdce8c4SStefano Zampini break; 2711fcdce8c4SStefano Zampini case MATPRODUCT_PtAP: 2712fcdce8c4SStefano Zampini case MATPRODUCT_RARt: 2713fcdce8c4SStefano Zampini case MATPRODUCT_ABC: 2714fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_ABC_Basic; 2715fcdce8c4SStefano Zampini break; 2716fcdce8c4SStefano Zampini default: 2717fcdce8c4SStefano Zampini break; 2718fcdce8c4SStefano Zampini } 2719fcdce8c4SStefano Zampini } else { /* fallback for AIJ */ 2720fcdce8c4SStefano Zampini ierr = MatProductSetFromOptions_SeqAIJ(mat);CHKERRQ(ierr); 2721fcdce8c4SStefano Zampini } 2722ccdfe979SStefano Zampini PetscFunctionReturn(0); 2723ccdfe979SStefano Zampini } 2724ccdfe979SStefano Zampini 27256fa9248bSJed Brown static PetscErrorCode MatMult_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy) 27269ae82921SPaul Mullowney { 2727b175d8bbSPaul Mullowney PetscErrorCode ierr; 27289ae82921SPaul Mullowney 27299ae82921SPaul Mullowney PetscFunctionBegin; 2730e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,NULL,yy,PETSC_FALSE,PETSC_FALSE);CHKERRQ(ierr); 2731e6e9a74fSStefano Zampini PetscFunctionReturn(0); 2732e6e9a74fSStefano Zampini } 2733e6e9a74fSStefano Zampini 2734e6e9a74fSStefano Zampini static PetscErrorCode MatMultAdd_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy, Vec zz) 2735e6e9a74fSStefano Zampini { 2736e6e9a74fSStefano Zampini PetscErrorCode ierr; 2737e6e9a74fSStefano Zampini 2738e6e9a74fSStefano Zampini PetscFunctionBegin; 2739e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,yy,zz,PETSC_FALSE,PETSC_FALSE);CHKERRQ(ierr); 2740e6e9a74fSStefano Zampini PetscFunctionReturn(0); 2741e6e9a74fSStefano Zampini } 2742e6e9a74fSStefano Zampini 2743e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTranspose_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy) 2744e6e9a74fSStefano Zampini { 2745e6e9a74fSStefano Zampini PetscErrorCode ierr; 2746e6e9a74fSStefano Zampini 2747e6e9a74fSStefano Zampini PetscFunctionBegin; 2748e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,NULL,yy,PETSC_TRUE,PETSC_TRUE);CHKERRQ(ierr); 2749e6e9a74fSStefano Zampini PetscFunctionReturn(0); 2750e6e9a74fSStefano Zampini } 2751e6e9a74fSStefano Zampini 2752e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTransposeAdd_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy,Vec zz) 2753e6e9a74fSStefano Zampini { 2754e6e9a74fSStefano Zampini PetscErrorCode ierr; 2755e6e9a74fSStefano Zampini 2756e6e9a74fSStefano Zampini PetscFunctionBegin; 2757e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,yy,zz,PETSC_TRUE,PETSC_TRUE);CHKERRQ(ierr); 27589ae82921SPaul Mullowney PetscFunctionReturn(0); 27599ae82921SPaul Mullowney } 27609ae82921SPaul Mullowney 27616fa9248bSJed Brown static PetscErrorCode MatMultTranspose_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy) 2762ca45077fSPaul Mullowney { 2763b175d8bbSPaul Mullowney PetscErrorCode ierr; 2764ca45077fSPaul Mullowney 2765ca45077fSPaul Mullowney PetscFunctionBegin; 2766e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,NULL,yy,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr); 2767ca45077fSPaul Mullowney PetscFunctionReturn(0); 2768ca45077fSPaul Mullowney } 2769ca45077fSPaul Mullowney 2770a0e72f99SJunchao Zhang __global__ static void ScatterAdd(PetscInt n, PetscInt *idx,const PetscScalar *x,PetscScalar *y) 2771a0e72f99SJunchao Zhang { 2772a0e72f99SJunchao Zhang int i = blockIdx.x*blockDim.x + threadIdx.x; 2773a0e72f99SJunchao Zhang if (i < n) y[idx[i]] += x[i]; 2774a0e72f99SJunchao Zhang } 2775a0e72f99SJunchao Zhang 2776afb2bd1cSJunchao Zhang /* z = op(A) x + y. If trans & !herm, op = ^T; if trans & herm, op = ^H; if !trans, op = no-op */ 2777e6e9a74fSStefano Zampini static PetscErrorCode MatMultAddKernel_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy,Vec zz,PetscBool trans,PetscBool herm) 27789ae82921SPaul Mullowney { 27799ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 2780aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 27819ff858a8SKarl Rupp Mat_SeqAIJCUSPARSEMultStruct *matstruct; 2782e6e9a74fSStefano Zampini PetscScalar *xarray,*zarray,*dptr,*beta,*xptr; 2783b175d8bbSPaul Mullowney PetscErrorCode ierr; 2784aa372e3fSPaul Mullowney cusparseStatus_t stat; 2785e6e9a74fSStefano Zampini cusparseOperation_t opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2786e6e9a74fSStefano Zampini PetscBool compressed; 2787afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2788afb2bd1cSJunchao Zhang PetscInt nx,ny; 2789afb2bd1cSJunchao Zhang #endif 27906e111a19SKarl Rupp 27919ae82921SPaul Mullowney PetscFunctionBegin; 2792e8d2b73aSMark Adams if (herm && !trans) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_GPU,"Hermitian and not transpose not supported"); 2793e6e9a74fSStefano Zampini if (!a->nonzerorowcnt) { 2794afb2bd1cSJunchao Zhang if (!yy) {ierr = VecSet_SeqCUDA(zz,0);CHKERRQ(ierr);} 2795d38a13f6SStefano Zampini else {ierr = VecCopy_SeqCUDA(yy,zz);CHKERRQ(ierr);} 2796e6e9a74fSStefano Zampini PetscFunctionReturn(0); 2797e6e9a74fSStefano Zampini } 279834d6c7a5SJose E. Roman /* The line below is necessary due to the operations that modify the matrix on the CPU (axpy, scale, etc) */ 279934d6c7a5SJose E. Roman ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 2800e6e9a74fSStefano Zampini if (!trans) { 28019ff858a8SKarl Rupp matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->mat; 2802e8d2b73aSMark Adams if (!matstruct) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_GPU,"SeqAIJCUSPARSE does not have a 'mat' (need to fix)"); 2803e6e9a74fSStefano Zampini } else { 28041a2c6b5cSJunchao Zhang if (herm || !A->form_explicit_transpose) { 2805e6e9a74fSStefano Zampini opA = herm ? CUSPARSE_OPERATION_CONJUGATE_TRANSPOSE : CUSPARSE_OPERATION_TRANSPOSE; 2806e6e9a74fSStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->mat; 2807e6e9a74fSStefano Zampini } else { 28081a2c6b5cSJunchao Zhang if (!cusparsestruct->matTranspose) {ierr = MatSeqAIJCUSPARSEFormExplicitTransposeForMult(A);CHKERRQ(ierr);} 2809e6e9a74fSStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->matTranspose; 2810e6e9a74fSStefano Zampini } 2811e6e9a74fSStefano Zampini } 2812e6e9a74fSStefano Zampini /* Does the matrix use compressed rows (i.e., drop zero rows)? */ 2813e6e9a74fSStefano Zampini compressed = matstruct->cprowIndices ? PETSC_TRUE : PETSC_FALSE; 2814213423ffSJunchao Zhang 2815e6e9a74fSStefano Zampini try { 2816e6e9a74fSStefano Zampini ierr = VecCUDAGetArrayRead(xx,(const PetscScalar**)&xarray);CHKERRQ(ierr); 2817213423ffSJunchao Zhang if (yy == zz) {ierr = VecCUDAGetArray(zz,&zarray);CHKERRQ(ierr);} /* read & write zz, so need to get uptodate zarray on GPU */ 2818213423ffSJunchao Zhang else {ierr = VecCUDAGetArrayWrite(zz,&zarray);CHKERRQ(ierr);} /* write zz, so no need to init zarray on GPU */ 2819afb2bd1cSJunchao Zhang 282085ba7357SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2821e6e9a74fSStefano Zampini if (opA == CUSPARSE_OPERATION_NON_TRANSPOSE) { 2822afb2bd1cSJunchao Zhang /* z = A x + beta y. 2823afb2bd1cSJunchao Zhang If A is compressed (with less rows), then Ax is shorter than the full z, so we need a work vector to store Ax. 2824afb2bd1cSJunchao Zhang When A is non-compressed, and z = y, we can set beta=1 to compute y = Ax + y in one call. 2825afb2bd1cSJunchao Zhang */ 2826e6e9a74fSStefano Zampini xptr = xarray; 2827afb2bd1cSJunchao Zhang dptr = compressed ? cusparsestruct->workVector->data().get() : zarray; 2828213423ffSJunchao Zhang beta = (yy == zz && !compressed) ? matstruct->beta_one : matstruct->beta_zero; 2829afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2830afb2bd1cSJunchao Zhang /* Get length of x, y for y=Ax. ny might be shorter than the work vector's allocated length, since the work vector is 2831afb2bd1cSJunchao Zhang allocated to accommodate different uses. So we get the length info directly from mat. 2832afb2bd1cSJunchao Zhang */ 2833afb2bd1cSJunchao Zhang if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 2834afb2bd1cSJunchao Zhang CsrMatrix *mat = (CsrMatrix*)matstruct->mat; 2835afb2bd1cSJunchao Zhang nx = mat->num_cols; 2836afb2bd1cSJunchao Zhang ny = mat->num_rows; 2837afb2bd1cSJunchao Zhang } 2838afb2bd1cSJunchao Zhang #endif 2839e6e9a74fSStefano Zampini } else { 2840afb2bd1cSJunchao Zhang /* z = A^T x + beta y 2841afb2bd1cSJunchao Zhang If A is compressed, then we need a work vector as the shorter version of x to compute A^T x. 2842afb2bd1cSJunchao Zhang Note A^Tx is of full length, so we set beta to 1.0 if y exists. 2843afb2bd1cSJunchao Zhang */ 2844afb2bd1cSJunchao Zhang xptr = compressed ? cusparsestruct->workVector->data().get() : xarray; 2845e6e9a74fSStefano Zampini dptr = zarray; 2846e6e9a74fSStefano Zampini beta = yy ? matstruct->beta_one : matstruct->beta_zero; 2847afb2bd1cSJunchao Zhang if (compressed) { /* Scatter x to work vector */ 2848e6e9a74fSStefano Zampini thrust::device_ptr<PetscScalar> xarr = thrust::device_pointer_cast(xarray); 2849a0e72f99SJunchao Zhang thrust::for_each(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(xarr, matstruct->cprowIndices->begin()))), 2850e6e9a74fSStefano Zampini thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(xarr, matstruct->cprowIndices->begin()))) + matstruct->cprowIndices->size(), 2851e6e9a74fSStefano Zampini VecCUDAEqualsReverse()); 2852e6e9a74fSStefano Zampini } 2853afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2854afb2bd1cSJunchao Zhang if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 2855afb2bd1cSJunchao Zhang CsrMatrix *mat = (CsrMatrix*)matstruct->mat; 2856afb2bd1cSJunchao Zhang nx = mat->num_rows; 2857afb2bd1cSJunchao Zhang ny = mat->num_cols; 2858afb2bd1cSJunchao Zhang } 2859afb2bd1cSJunchao Zhang #endif 2860e6e9a74fSStefano Zampini } 28619ae82921SPaul Mullowney 2862afb2bd1cSJunchao Zhang /* csr_spmv does y = alpha op(A) x + beta y */ 2863aa372e3fSPaul Mullowney if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 2864afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2865afb2bd1cSJunchao Zhang if (opA < 0 || opA > 2) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE ABI on cusparseOperation_t has changed and PETSc has not been updated accordingly"); 2866afb2bd1cSJunchao Zhang if (!matstruct->cuSpMV[opA].initialized) { /* built on demand */ 2867ee7b52eaSHong Zhang cudaError_t cerr; 2868afb2bd1cSJunchao Zhang stat = cusparseCreateDnVec(&matstruct->cuSpMV[opA].vecXDescr,nx,xptr,cusparse_scalartype);CHKERRCUSPARSE(stat); 2869afb2bd1cSJunchao Zhang stat = cusparseCreateDnVec(&matstruct->cuSpMV[opA].vecYDescr,ny,dptr,cusparse_scalartype);CHKERRCUSPARSE(stat); 2870afb2bd1cSJunchao Zhang stat = cusparseSpMV_bufferSize(cusparsestruct->handle, opA, matstruct->alpha_one, 2871afb2bd1cSJunchao Zhang matstruct->matDescr, 2872afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecXDescr, beta, 2873afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecYDescr, 2874afb2bd1cSJunchao Zhang cusparse_scalartype, 2875afb2bd1cSJunchao Zhang cusparsestruct->spmvAlg, 2876afb2bd1cSJunchao Zhang &matstruct->cuSpMV[opA].spmvBufferSize);CHKERRCUSPARSE(stat); 2877afb2bd1cSJunchao Zhang cerr = cudaMalloc(&matstruct->cuSpMV[opA].spmvBuffer,matstruct->cuSpMV[opA].spmvBufferSize);CHKERRCUDA(cerr); 2878afb2bd1cSJunchao Zhang 2879afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].initialized = PETSC_TRUE; 2880afb2bd1cSJunchao Zhang } else { 2881afb2bd1cSJunchao Zhang /* x, y's value pointers might change between calls, but their shape is kept, so we just update pointers */ 2882afb2bd1cSJunchao Zhang stat = cusparseDnVecSetValues(matstruct->cuSpMV[opA].vecXDescr,xptr);CHKERRCUSPARSE(stat); 2883afb2bd1cSJunchao Zhang stat = cusparseDnVecSetValues(matstruct->cuSpMV[opA].vecYDescr,dptr);CHKERRCUSPARSE(stat); 2884afb2bd1cSJunchao Zhang } 2885afb2bd1cSJunchao Zhang 2886afb2bd1cSJunchao Zhang stat = cusparseSpMV(cusparsestruct->handle, opA, 2887afb2bd1cSJunchao Zhang matstruct->alpha_one, 28881a2c6b5cSJunchao Zhang matstruct->matDescr, /* built in MatSeqAIJCUSPARSECopyToGPU() or MatSeqAIJCUSPARSEFormExplicitTransposeForMult() */ 2889afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecXDescr, 2890afb2bd1cSJunchao Zhang beta, 2891afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecYDescr, 2892afb2bd1cSJunchao Zhang cusparse_scalartype, 2893afb2bd1cSJunchao Zhang cusparsestruct->spmvAlg, 2894afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].spmvBuffer);CHKERRCUSPARSE(stat); 2895afb2bd1cSJunchao Zhang #else 28967656d835SStefano Zampini CsrMatrix *mat = (CsrMatrix*)matstruct->mat; 2897e6e9a74fSStefano Zampini stat = cusparse_csr_spmv(cusparsestruct->handle, opA, 2898a65300a6SPaul Mullowney mat->num_rows, mat->num_cols, 2899afb2bd1cSJunchao Zhang mat->num_entries, matstruct->alpha_one, matstruct->descr, 2900aa372e3fSPaul Mullowney mat->values->data().get(), mat->row_offsets->data().get(), 2901e6e9a74fSStefano Zampini mat->column_indices->data().get(), xptr, beta, 290257d48284SJunchao Zhang dptr);CHKERRCUSPARSE(stat); 2903afb2bd1cSJunchao Zhang #endif 2904aa372e3fSPaul Mullowney } else { 2905213423ffSJunchao Zhang if (cusparsestruct->nrows) { 2906afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2907afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 2908afb2bd1cSJunchao Zhang #else 2909301298b4SMark Adams cusparseHybMat_t hybMat = (cusparseHybMat_t)matstruct->mat; 2910e6e9a74fSStefano Zampini stat = cusparse_hyb_spmv(cusparsestruct->handle, opA, 2911afb2bd1cSJunchao Zhang matstruct->alpha_one, matstruct->descr, hybMat, 2912e6e9a74fSStefano Zampini xptr, beta, 291357d48284SJunchao Zhang dptr);CHKERRCUSPARSE(stat); 2914afb2bd1cSJunchao Zhang #endif 2915a65300a6SPaul Mullowney } 2916aa372e3fSPaul Mullowney } 2917958c4211Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2918aa372e3fSPaul Mullowney 2919e6e9a74fSStefano Zampini if (opA == CUSPARSE_OPERATION_NON_TRANSPOSE) { 2920213423ffSJunchao Zhang if (yy) { /* MatMultAdd: zz = A*xx + yy */ 2921213423ffSJunchao Zhang if (compressed) { /* A is compressed. We first copy yy to zz, then ScatterAdd the work vector to zz */ 2922213423ffSJunchao Zhang ierr = VecCopy_SeqCUDA(yy,zz);CHKERRQ(ierr); /* zz = yy */ 2923e6e9a74fSStefano Zampini } else if (zz != yy) { /* A is not compressed. zz already contains A*xx, and we just need to add yy */ 2924213423ffSJunchao Zhang ierr = VecAXPY_SeqCUDA(zz,1.0,yy);CHKERRQ(ierr); /* zz += yy */ 29257656d835SStefano Zampini } 2926213423ffSJunchao Zhang } else if (compressed) { /* MatMult: zz = A*xx. A is compressed, so we zero zz first, then ScatterAdd the work vector to zz */ 2927c1fb3f03SStefano Zampini ierr = VecSet_SeqCUDA(zz,0);CHKERRQ(ierr); 29287656d835SStefano Zampini } 29297656d835SStefano Zampini 2930213423ffSJunchao Zhang /* ScatterAdd the result from work vector into the full vector when A is compressed */ 2931213423ffSJunchao Zhang if (compressed) { 2932e6e9a74fSStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2933a0e72f99SJunchao Zhang /* I wanted to make this for_each asynchronous but failed. thrust::async::for_each() returns an event (internally registerred) 2934a0e72f99SJunchao Zhang and in the destructor of the scope, it will call cudaStreamSynchronize() on this stream. One has to store all events to 2935a0e72f99SJunchao Zhang prevent that. So I just add a ScatterAdd kernel. 2936a0e72f99SJunchao Zhang */ 2937a0e72f99SJunchao Zhang #if 0 2938a0e72f99SJunchao Zhang thrust::device_ptr<PetscScalar> zptr = thrust::device_pointer_cast(zarray); 2939a0e72f99SJunchao Zhang thrust::async::for_each(thrust::cuda::par.on(cusparsestruct->stream), 2940a0e72f99SJunchao Zhang thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(zptr, matstruct->cprowIndices->begin()))), 2941e6e9a74fSStefano Zampini thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(zptr, matstruct->cprowIndices->begin()))) + matstruct->cprowIndices->size(), 2942c41cb2e2SAlejandro Lamas Daviña VecCUDAPlusEquals()); 2943a0e72f99SJunchao Zhang #else 2944a0e72f99SJunchao Zhang PetscInt n = matstruct->cprowIndices->size(); 2945a0e72f99SJunchao Zhang ScatterAdd<<<(n+255)/256,256,0,PetscDefaultCudaStream>>>(n,matstruct->cprowIndices->data().get(),cusparsestruct->workVector->data().get(),zarray); 2946a0e72f99SJunchao Zhang #endif 2947958c4211Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2948e6e9a74fSStefano Zampini } 2949e6e9a74fSStefano Zampini } else { 2950e6e9a74fSStefano Zampini if (yy && yy != zz) { 2951e6e9a74fSStefano Zampini ierr = VecAXPY_SeqCUDA(zz,1.0,yy);CHKERRQ(ierr); /* zz += yy */ 2952e6e9a74fSStefano Zampini } 2953e6e9a74fSStefano Zampini } 2954e6e9a74fSStefano Zampini ierr = VecCUDARestoreArrayRead(xx,(const PetscScalar**)&xarray);CHKERRQ(ierr); 2955213423ffSJunchao Zhang if (yy == zz) {ierr = VecCUDARestoreArray(zz,&zarray);CHKERRQ(ierr);} 2956213423ffSJunchao Zhang else {ierr = VecCUDARestoreArrayWrite(zz,&zarray);CHKERRQ(ierr);} 29579ae82921SPaul Mullowney } catch(char *ex) { 29589ae82921SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 29599ae82921SPaul Mullowney } 2960e6e9a74fSStefano Zampini if (yy) { 2961958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*a->nz);CHKERRQ(ierr); 2962e6e9a74fSStefano Zampini } else { 2963e6e9a74fSStefano Zampini ierr = PetscLogGpuFlops(2.0*a->nz-a->nonzerorowcnt);CHKERRQ(ierr); 2964e6e9a74fSStefano Zampini } 29659ae82921SPaul Mullowney PetscFunctionReturn(0); 29669ae82921SPaul Mullowney } 29679ae82921SPaul Mullowney 29686fa9248bSJed Brown static PetscErrorCode MatMultTransposeAdd_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy,Vec zz) 2969ca45077fSPaul Mullowney { 2970b175d8bbSPaul Mullowney PetscErrorCode ierr; 29716e111a19SKarl Rupp 2972ca45077fSPaul Mullowney PetscFunctionBegin; 2973e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,yy,zz,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr); 2974ca45077fSPaul Mullowney PetscFunctionReturn(0); 2975ca45077fSPaul Mullowney } 2976ca45077fSPaul Mullowney 29776fa9248bSJed Brown static PetscErrorCode MatAssemblyEnd_SeqAIJCUSPARSE(Mat A,MatAssemblyType mode) 29789ae82921SPaul Mullowney { 29799ae82921SPaul Mullowney PetscErrorCode ierr; 2980*042217e8SBarry Smith PetscObjectState onnz = A->nonzerostate; 2981*042217e8SBarry Smith Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 29823fa6b06aSMark Adams 2983*042217e8SBarry Smith PetscFunctionBegin; 2984*042217e8SBarry Smith ierr = MatAssemblyEnd_SeqAIJ(A,mode);CHKERRQ(ierr); 2985*042217e8SBarry Smith if (onnz != A->nonzerostate && cusp->deviceMat) { 2986*042217e8SBarry Smith cudaError_t cerr; 2987*042217e8SBarry Smith 2988*042217e8SBarry Smith ierr = PetscInfo(A,"Destroy device mat since nonzerostate changed\n");CHKERRQ(ierr); 2989*042217e8SBarry Smith cerr = cudaFree(cusp->deviceMat);CHKERRCUDA(cerr); 2990*042217e8SBarry Smith cusp->deviceMat = NULL; 2991*042217e8SBarry Smith } 29929ae82921SPaul Mullowney PetscFunctionReturn(0); 29939ae82921SPaul Mullowney } 29949ae82921SPaul Mullowney 29959ae82921SPaul Mullowney /* --------------------------------------------------------------------------------*/ 2996e057df02SPaul Mullowney /*@ 29979ae82921SPaul Mullowney MatCreateSeqAIJCUSPARSE - Creates a sparse matrix in AIJ (compressed row) format 2998e057df02SPaul Mullowney (the default parallel PETSc format). This matrix will ultimately pushed down 2999e057df02SPaul Mullowney to NVidia GPUs and use the CUSPARSE library for calculations. For good matrix 3000e057df02SPaul Mullowney assembly performance the user should preallocate the matrix storage by setting 3001e057df02SPaul Mullowney the parameter nz (or the array nnz). By setting these parameters accurately, 3002e057df02SPaul Mullowney performance during matrix assembly can be increased by more than a factor of 50. 30039ae82921SPaul Mullowney 3004d083f849SBarry Smith Collective 30059ae82921SPaul Mullowney 30069ae82921SPaul Mullowney Input Parameters: 30079ae82921SPaul Mullowney + comm - MPI communicator, set to PETSC_COMM_SELF 30089ae82921SPaul Mullowney . m - number of rows 30099ae82921SPaul Mullowney . n - number of columns 30109ae82921SPaul Mullowney . nz - number of nonzeros per row (same for all rows) 30119ae82921SPaul Mullowney - nnz - array containing the number of nonzeros in the various rows 30120298fd71SBarry Smith (possibly different for each row) or NULL 30139ae82921SPaul Mullowney 30149ae82921SPaul Mullowney Output Parameter: 30159ae82921SPaul Mullowney . A - the matrix 30169ae82921SPaul Mullowney 30179ae82921SPaul Mullowney It is recommended that one use the MatCreate(), MatSetType() and/or MatSetFromOptions(), 30189ae82921SPaul Mullowney MatXXXXSetPreallocation() paradgm instead of this routine directly. 30199ae82921SPaul Mullowney [MatXXXXSetPreallocation() is, for example, MatSeqAIJSetPreallocation] 30209ae82921SPaul Mullowney 30219ae82921SPaul Mullowney Notes: 30229ae82921SPaul Mullowney If nnz is given then nz is ignored 30239ae82921SPaul Mullowney 30249ae82921SPaul Mullowney The AIJ format (also called the Yale sparse matrix format or 30259ae82921SPaul Mullowney compressed row storage), is fully compatible with standard Fortran 77 30269ae82921SPaul Mullowney storage. That is, the stored row and column indices can begin at 30279ae82921SPaul Mullowney either one (as in Fortran) or zero. See the users' manual for details. 30289ae82921SPaul Mullowney 30299ae82921SPaul Mullowney Specify the preallocated storage with either nz or nnz (not both). 30300298fd71SBarry Smith Set nz=PETSC_DEFAULT and nnz=NULL for PETSc to control dynamic memory 30319ae82921SPaul Mullowney allocation. For large problems you MUST preallocate memory or you 30329ae82921SPaul Mullowney will get TERRIBLE performance, see the users' manual chapter on matrices. 30339ae82921SPaul Mullowney 30349ae82921SPaul Mullowney By default, this format uses inodes (identical nodes) when possible, to 30359ae82921SPaul Mullowney improve numerical efficiency of matrix-vector products and solves. We 30369ae82921SPaul Mullowney search for consecutive rows with the same nonzero structure, thereby 30379ae82921SPaul Mullowney reusing matrix information to achieve increased efficiency. 30389ae82921SPaul Mullowney 30399ae82921SPaul Mullowney Level: intermediate 30409ae82921SPaul Mullowney 3041e057df02SPaul Mullowney .seealso: MatCreate(), MatCreateAIJ(), MatSetValues(), MatSeqAIJSetColumnIndices(), MatCreateSeqAIJWithArrays(), MatCreateAIJ(), MATSEQAIJCUSPARSE, MATAIJCUSPARSE 30429ae82921SPaul Mullowney @*/ 30439ae82921SPaul Mullowney PetscErrorCode MatCreateSeqAIJCUSPARSE(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt nz,const PetscInt nnz[],Mat *A) 30449ae82921SPaul Mullowney { 30459ae82921SPaul Mullowney PetscErrorCode ierr; 30469ae82921SPaul Mullowney 30479ae82921SPaul Mullowney PetscFunctionBegin; 30489ae82921SPaul Mullowney ierr = MatCreate(comm,A);CHKERRQ(ierr); 30499ae82921SPaul Mullowney ierr = MatSetSizes(*A,m,n,m,n);CHKERRQ(ierr); 30509ae82921SPaul Mullowney ierr = MatSetType(*A,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 30519ae82921SPaul Mullowney ierr = MatSeqAIJSetPreallocation_SeqAIJ(*A,nz,(PetscInt*)nnz);CHKERRQ(ierr); 30529ae82921SPaul Mullowney PetscFunctionReturn(0); 30539ae82921SPaul Mullowney } 30549ae82921SPaul Mullowney 30556fa9248bSJed Brown static PetscErrorCode MatDestroy_SeqAIJCUSPARSE(Mat A) 30569ae82921SPaul Mullowney { 30579ae82921SPaul Mullowney PetscErrorCode ierr; 3058ab25e6cbSDominic Meiser 30599ae82921SPaul Mullowney PetscFunctionBegin; 30609ae82921SPaul Mullowney if (A->factortype == MAT_FACTOR_NONE) { 3061470880abSPatrick Sanan ierr = MatSeqAIJCUSPARSE_Destroy((Mat_SeqAIJCUSPARSE**)&A->spptr);CHKERRQ(ierr); 30629ae82921SPaul Mullowney } else { 3063470880abSPatrick Sanan ierr = MatSeqAIJCUSPARSETriFactors_Destroy((Mat_SeqAIJCUSPARSETriFactors**)&A->spptr);CHKERRQ(ierr); 3064aa372e3fSPaul Mullowney } 3065c215019aSStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJCopySubArray_C",NULL);CHKERRQ(ierr); 3066ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatCUSPARSESetFormat_C",NULL);CHKERRQ(ierr); 3067ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C",NULL);CHKERRQ(ierr); 3068ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdense_C",NULL);CHKERRQ(ierr); 3069fcdce8c4SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C",NULL);CHKERRQ(ierr); 3070ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL);CHKERRQ(ierr); 30717e8381f9SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",NULL);CHKERRQ(ierr); 30727e8381f9SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",NULL);CHKERRQ(ierr); 30739ae82921SPaul Mullowney ierr = MatDestroy_SeqAIJ(A);CHKERRQ(ierr); 30749ae82921SPaul Mullowney PetscFunctionReturn(0); 30759ae82921SPaul Mullowney } 30769ae82921SPaul Mullowney 3077ccdfe979SStefano Zampini PETSC_INTERN PetscErrorCode MatConvert_SeqAIJ_SeqAIJCUSPARSE(Mat,MatType,MatReuse,Mat*); 307895639643SRichard Tran Mills static PetscErrorCode MatBindToCPU_SeqAIJCUSPARSE(Mat,PetscBool); 30799ff858a8SKarl Rupp static PetscErrorCode MatDuplicate_SeqAIJCUSPARSE(Mat A,MatDuplicateOption cpvalues,Mat *B) 30809ff858a8SKarl Rupp { 30819ff858a8SKarl Rupp PetscErrorCode ierr; 30829ff858a8SKarl Rupp 30839ff858a8SKarl Rupp PetscFunctionBegin; 30849ff858a8SKarl Rupp ierr = MatDuplicate_SeqAIJ(A,cpvalues,B);CHKERRQ(ierr); 3085ccdfe979SStefano Zampini ierr = MatConvert_SeqAIJ_SeqAIJCUSPARSE(*B,MATSEQAIJCUSPARSE,MAT_INPLACE_MATRIX,B);CHKERRQ(ierr); 30869ff858a8SKarl Rupp PetscFunctionReturn(0); 30879ff858a8SKarl Rupp } 30889ff858a8SKarl Rupp 3089039c6fbaSStefano Zampini static PetscErrorCode MatAXPY_SeqAIJCUSPARSE(Mat Y,PetscScalar a,Mat X,MatStructure str) 309095639643SRichard Tran Mills { 3091e6e9a74fSStefano Zampini PetscErrorCode ierr; 3092a587d139SMark Mat_SeqAIJ *x = (Mat_SeqAIJ*)X->data,*y = (Mat_SeqAIJ*)Y->data; 3093039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cy; 3094039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cx; 3095039c6fbaSStefano Zampini PetscScalar *ay; 3096039c6fbaSStefano Zampini const PetscScalar *ax; 3097039c6fbaSStefano Zampini CsrMatrix *csry,*csrx; 3098e6e9a74fSStefano Zampini 309995639643SRichard Tran Mills PetscFunctionBegin; 3100a49f1ed0SStefano Zampini cy = (Mat_SeqAIJCUSPARSE*)Y->spptr; 3101a49f1ed0SStefano Zampini cx = (Mat_SeqAIJCUSPARSE*)X->spptr; 3102039c6fbaSStefano Zampini if (X->ops->axpy != Y->ops->axpy) { 3103a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(Y,PETSC_FALSE);CHKERRQ(ierr); 3104a587d139SMark ierr = MatAXPY_SeqAIJ(Y,a,X,str);CHKERRQ(ierr); 3105a587d139SMark PetscFunctionReturn(0); 310695639643SRichard Tran Mills } 3107039c6fbaSStefano Zampini /* if we are here, it means both matrices are bound to GPU */ 3108a587d139SMark ierr = MatSeqAIJCUSPARSECopyToGPU(Y);CHKERRQ(ierr); 3109a587d139SMark ierr = MatSeqAIJCUSPARSECopyToGPU(X);CHKERRQ(ierr); 3110e8d2b73aSMark Adams if (cy->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)Y),PETSC_ERR_GPU,"only MAT_CUSPARSE_CSR supported"); 3111e8d2b73aSMark Adams if (cx->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)X),PETSC_ERR_GPU,"only MAT_CUSPARSE_CSR supported"); 3112039c6fbaSStefano Zampini csry = (CsrMatrix*)cy->mat->mat; 3113039c6fbaSStefano Zampini csrx = (CsrMatrix*)cx->mat->mat; 3114039c6fbaSStefano Zampini /* see if we can turn this into a cublas axpy */ 3115039c6fbaSStefano Zampini if (str != SAME_NONZERO_PATTERN && x->nz == y->nz && !x->compressedrow.use && !y->compressedrow.use) { 3116039c6fbaSStefano Zampini bool eq = thrust::equal(thrust::device,csry->row_offsets->begin(),csry->row_offsets->end(),csrx->row_offsets->begin()); 3117039c6fbaSStefano Zampini if (eq) { 3118039c6fbaSStefano Zampini eq = thrust::equal(thrust::device,csry->column_indices->begin(),csry->column_indices->end(),csrx->column_indices->begin()); 3119039c6fbaSStefano Zampini } 3120039c6fbaSStefano Zampini if (eq) str = SAME_NONZERO_PATTERN; 3121039c6fbaSStefano Zampini } 3122d2be01edSStefano Zampini /* spgeam is buggy with one column */ 3123d2be01edSStefano Zampini if (Y->cmap->n == 1 && str != SAME_NONZERO_PATTERN) str = DIFFERENT_NONZERO_PATTERN; 3124039c6fbaSStefano Zampini 3125039c6fbaSStefano Zampini if (str == SUBSET_NONZERO_PATTERN) { 3126039c6fbaSStefano Zampini cusparseStatus_t stat; 3127039c6fbaSStefano Zampini PetscScalar b = 1.0; 3128039c6fbaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3129039c6fbaSStefano Zampini size_t bufferSize; 3130039c6fbaSStefano Zampini void *buffer; 3131ee7b52eaSHong Zhang cudaError_t cerr; 3132039c6fbaSStefano Zampini #endif 3133039c6fbaSStefano Zampini 3134039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArrayRead(X,&ax);CHKERRQ(ierr); 3135039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArray(Y,&ay);CHKERRQ(ierr); 3136039c6fbaSStefano Zampini stat = cusparseSetPointerMode(cy->handle, CUSPARSE_POINTER_MODE_HOST);CHKERRCUSPARSE(stat); 3137039c6fbaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3138039c6fbaSStefano Zampini stat = cusparse_csr_spgeam_bufferSize(cy->handle,Y->rmap->n,Y->cmap->n, 3139039c6fbaSStefano Zampini &a,cx->mat->descr,x->nz,ax,csrx->row_offsets->data().get(),csrx->column_indices->data().get(), 3140039c6fbaSStefano Zampini &b,cy->mat->descr,y->nz,ay,csry->row_offsets->data().get(),csry->column_indices->data().get(), 3141039c6fbaSStefano Zampini cy->mat->descr, ay,csry->row_offsets->data().get(),csry->column_indices->data().get(),&bufferSize);CHKERRCUSPARSE(stat); 3142039c6fbaSStefano Zampini cerr = cudaMalloc(&buffer,bufferSize);CHKERRCUDA(cerr); 3143039c6fbaSStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3144039c6fbaSStefano Zampini stat = cusparse_csr_spgeam(cy->handle,Y->rmap->n,Y->cmap->n, 3145039c6fbaSStefano Zampini &a,cx->mat->descr,x->nz,ax,csrx->row_offsets->data().get(),csrx->column_indices->data().get(), 3146039c6fbaSStefano Zampini &b,cy->mat->descr,y->nz,ay,csry->row_offsets->data().get(),csry->column_indices->data().get(), 3147039c6fbaSStefano Zampini cy->mat->descr, ay,csry->row_offsets->data().get(),csry->column_indices->data().get(),buffer);CHKERRCUSPARSE(stat); 3148039c6fbaSStefano Zampini ierr = PetscLogGpuFlops(x->nz + y->nz);CHKERRQ(ierr); 3149039c6fbaSStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3150039c6fbaSStefano Zampini cerr = cudaFree(buffer);CHKERRCUDA(cerr); 3151039c6fbaSStefano Zampini #else 3152039c6fbaSStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3153039c6fbaSStefano Zampini stat = cusparse_csr_spgeam(cy->handle,Y->rmap->n,Y->cmap->n, 3154039c6fbaSStefano Zampini &a,cx->mat->descr,x->nz,ax,csrx->row_offsets->data().get(),csrx->column_indices->data().get(), 3155039c6fbaSStefano Zampini &b,cy->mat->descr,y->nz,ay,csry->row_offsets->data().get(),csry->column_indices->data().get(), 3156039c6fbaSStefano Zampini cy->mat->descr, ay,csry->row_offsets->data().get(),csry->column_indices->data().get());CHKERRCUSPARSE(stat); 3157039c6fbaSStefano Zampini ierr = PetscLogGpuFlops(x->nz + y->nz);CHKERRQ(ierr); 3158039c6fbaSStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3159039c6fbaSStefano Zampini #endif 3160039c6fbaSStefano Zampini stat = cusparseSetPointerMode(cy->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 3161039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArrayRead(X,&ax);CHKERRQ(ierr); 3162039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArray(Y,&ay);CHKERRQ(ierr); 3163039c6fbaSStefano Zampini ierr = MatSeqAIJInvalidateDiagonal(Y);CHKERRQ(ierr); 3164039c6fbaSStefano Zampini } else if (str == SAME_NONZERO_PATTERN) { 3165a587d139SMark cublasHandle_t cublasv2handle; 3166039c6fbaSStefano Zampini cublasStatus_t berr; 3167a587d139SMark PetscBLASInt one = 1, bnz = 1; 3168039c6fbaSStefano Zampini 3169039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArrayRead(X,&ax);CHKERRQ(ierr); 3170039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArray(Y,&ay);CHKERRQ(ierr); 3171a587d139SMark ierr = PetscCUBLASGetHandle(&cublasv2handle);CHKERRQ(ierr); 3172a587d139SMark ierr = PetscBLASIntCast(x->nz,&bnz);CHKERRQ(ierr); 3173a587d139SMark ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3174039c6fbaSStefano Zampini berr = cublasXaxpy(cublasv2handle,bnz,&a,ax,one,ay,one);CHKERRCUBLAS(berr); 3175a587d139SMark ierr = PetscLogGpuFlops(2.0*bnz);CHKERRQ(ierr); 3176a587d139SMark ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3177039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArrayRead(X,&ax);CHKERRQ(ierr); 3178039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArray(Y,&ay);CHKERRQ(ierr); 3179a587d139SMark ierr = MatSeqAIJInvalidateDiagonal(Y);CHKERRQ(ierr); 3180039c6fbaSStefano Zampini } else { 3181a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(Y,PETSC_FALSE);CHKERRQ(ierr); 3182d2be01edSStefano Zampini ierr = MatAXPY_SeqAIJ(Y,a,X,str);CHKERRQ(ierr); 3183a587d139SMark } 318495639643SRichard Tran Mills PetscFunctionReturn(0); 318595639643SRichard Tran Mills } 318695639643SRichard Tran Mills 318733c9ba73SStefano Zampini static PetscErrorCode MatScale_SeqAIJCUSPARSE(Mat Y,PetscScalar a) 318833c9ba73SStefano Zampini { 318933c9ba73SStefano Zampini PetscErrorCode ierr; 319033c9ba73SStefano Zampini Mat_SeqAIJ *y = (Mat_SeqAIJ*)Y->data; 319133c9ba73SStefano Zampini PetscScalar *ay; 319233c9ba73SStefano Zampini cublasHandle_t cublasv2handle; 319333c9ba73SStefano Zampini cublasStatus_t berr; 319433c9ba73SStefano Zampini PetscBLASInt one = 1, bnz = 1; 319533c9ba73SStefano Zampini 319633c9ba73SStefano Zampini PetscFunctionBegin; 319733c9ba73SStefano Zampini ierr = MatSeqAIJCUSPARSEGetArray(Y,&ay);CHKERRQ(ierr); 319833c9ba73SStefano Zampini ierr = PetscCUBLASGetHandle(&cublasv2handle);CHKERRQ(ierr); 319933c9ba73SStefano Zampini ierr = PetscBLASIntCast(y->nz,&bnz);CHKERRQ(ierr); 320033c9ba73SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 320133c9ba73SStefano Zampini berr = cublasXscal(cublasv2handle,bnz,&a,ay,one);CHKERRCUBLAS(berr); 320233c9ba73SStefano Zampini ierr = PetscLogGpuFlops(bnz);CHKERRQ(ierr); 320333c9ba73SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 320433c9ba73SStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArray(Y,&ay);CHKERRQ(ierr); 320533c9ba73SStefano Zampini ierr = MatSeqAIJInvalidateDiagonal(Y);CHKERRQ(ierr); 320633c9ba73SStefano Zampini PetscFunctionReturn(0); 320733c9ba73SStefano Zampini } 320833c9ba73SStefano Zampini 32093fa6b06aSMark Adams static PetscErrorCode MatZeroEntries_SeqAIJCUSPARSE(Mat A) 32103fa6b06aSMark Adams { 32113fa6b06aSMark Adams PetscErrorCode ierr; 32127e8381f9SStefano Zampini PetscBool both = PETSC_FALSE; 3213a587d139SMark Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 32147e8381f9SStefano Zampini 32153fa6b06aSMark Adams PetscFunctionBegin; 32163fa6b06aSMark Adams if (A->factortype == MAT_FACTOR_NONE) { 32173fa6b06aSMark Adams Mat_SeqAIJCUSPARSE *spptr = (Mat_SeqAIJCUSPARSE*)A->spptr; 32187e8381f9SStefano Zampini if (spptr->mat) { 32197e8381f9SStefano Zampini CsrMatrix* matrix = (CsrMatrix*)spptr->mat->mat; 32207e8381f9SStefano Zampini if (matrix->values) { 32217e8381f9SStefano Zampini both = PETSC_TRUE; 32227e8381f9SStefano Zampini thrust::fill(thrust::device,matrix->values->begin(),matrix->values->end(),0.); 32237e8381f9SStefano Zampini } 32247e8381f9SStefano Zampini } 32257e8381f9SStefano Zampini if (spptr->matTranspose) { 32267e8381f9SStefano Zampini CsrMatrix* matrix = (CsrMatrix*)spptr->matTranspose->mat; 32277e8381f9SStefano Zampini if (matrix->values) { 32287e8381f9SStefano Zampini thrust::fill(thrust::device,matrix->values->begin(),matrix->values->end(),0.); 32297e8381f9SStefano Zampini } 32307e8381f9SStefano Zampini } 32313fa6b06aSMark Adams } 3232a587d139SMark //ierr = MatZeroEntries_SeqAIJ(A);CHKERRQ(ierr); 3233a587d139SMark ierr = PetscArrayzero(a->a,a->i[A->rmap->n]);CHKERRQ(ierr); 3234a587d139SMark ierr = MatSeqAIJInvalidateDiagonal(A);CHKERRQ(ierr); 32357e8381f9SStefano Zampini if (both) A->offloadmask = PETSC_OFFLOAD_BOTH; 3236a587d139SMark else A->offloadmask = PETSC_OFFLOAD_CPU; 32373fa6b06aSMark Adams PetscFunctionReturn(0); 32383fa6b06aSMark Adams } 32393fa6b06aSMark Adams 3240a587d139SMark static PetscErrorCode MatBindToCPU_SeqAIJCUSPARSE(Mat A,PetscBool flg) 3241a587d139SMark { 3242a587d139SMark Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 3243a587d139SMark PetscErrorCode ierr; 3244a587d139SMark 3245a587d139SMark PetscFunctionBegin; 3246a587d139SMark if (A->factortype != MAT_FACTOR_NONE) PetscFunctionReturn(0); 3247a587d139SMark if (flg) { 3248a587d139SMark ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 3249a587d139SMark 325033c9ba73SStefano Zampini A->ops->scale = MatScale_SeqAIJ; 3251a587d139SMark A->ops->axpy = MatAXPY_SeqAIJ; 3252a587d139SMark A->ops->zeroentries = MatZeroEntries_SeqAIJ; 3253a587d139SMark A->ops->mult = MatMult_SeqAIJ; 3254a587d139SMark A->ops->multadd = MatMultAdd_SeqAIJ; 3255a587d139SMark A->ops->multtranspose = MatMultTranspose_SeqAIJ; 3256a587d139SMark A->ops->multtransposeadd = MatMultTransposeAdd_SeqAIJ; 3257a587d139SMark A->ops->multhermitiantranspose = NULL; 3258a587d139SMark A->ops->multhermitiantransposeadd = NULL; 3259fcdce8c4SStefano Zampini A->ops->productsetfromoptions = MatProductSetFromOptions_SeqAIJ; 3260c215019aSStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJCopySubArray_C",NULL);CHKERRQ(ierr); 3261a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C",NULL);CHKERRQ(ierr); 3262a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdense_C",NULL);CHKERRQ(ierr); 3263a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",NULL);CHKERRQ(ierr); 3264a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",NULL);CHKERRQ(ierr); 3265a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJGetArray_C",MatSeqAIJGetArray_SeqAIJ);CHKERRQ(ierr); 3266fcdce8c4SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C",NULL);CHKERRQ(ierr); 3267a587d139SMark } else { 326833c9ba73SStefano Zampini A->ops->scale = MatScale_SeqAIJCUSPARSE; 3269a587d139SMark A->ops->axpy = MatAXPY_SeqAIJCUSPARSE; 3270a587d139SMark A->ops->zeroentries = MatZeroEntries_SeqAIJCUSPARSE; 3271a587d139SMark A->ops->mult = MatMult_SeqAIJCUSPARSE; 3272a587d139SMark A->ops->multadd = MatMultAdd_SeqAIJCUSPARSE; 3273a587d139SMark A->ops->multtranspose = MatMultTranspose_SeqAIJCUSPARSE; 3274a587d139SMark A->ops->multtransposeadd = MatMultTransposeAdd_SeqAIJCUSPARSE; 3275a587d139SMark A->ops->multhermitiantranspose = MatMultHermitianTranspose_SeqAIJCUSPARSE; 3276a587d139SMark A->ops->multhermitiantransposeadd = MatMultHermitianTransposeAdd_SeqAIJCUSPARSE; 3277fcdce8c4SStefano Zampini A->ops->productsetfromoptions = MatProductSetFromOptions_SeqAIJCUSPARSE; 3278c215019aSStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJCopySubArray_C",MatSeqAIJCopySubArray_SeqAIJCUSPARSE);CHKERRQ(ierr); 3279a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C",MatProductSetFromOptions_SeqAIJCUSPARSE);CHKERRQ(ierr); 3280a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdense_C",MatProductSetFromOptions_SeqAIJCUSPARSE);CHKERRQ(ierr); 3281a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",MatSetPreallocationCOO_SeqAIJCUSPARSE);CHKERRQ(ierr); 3282a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",MatSetValuesCOO_SeqAIJCUSPARSE);CHKERRQ(ierr); 3283a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJGetArray_C",MatSeqAIJGetArray_SeqAIJCUSPARSE);CHKERRQ(ierr); 3284fcdce8c4SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C",MatProductSetFromOptions_SeqAIJCUSPARSE);CHKERRQ(ierr); 3285a587d139SMark } 3286a587d139SMark A->boundtocpu = flg; 3287a587d139SMark a->inode.use = flg; 3288a587d139SMark PetscFunctionReturn(0); 3289a587d139SMark } 3290a587d139SMark 329149735bf3SStefano Zampini PETSC_INTERN PetscErrorCode MatConvert_SeqAIJ_SeqAIJCUSPARSE(Mat A, MatType mtype, MatReuse reuse, Mat* newmat) 32929ae82921SPaul Mullowney { 32939ae82921SPaul Mullowney PetscErrorCode ierr; 3294aa372e3fSPaul Mullowney cusparseStatus_t stat; 329549735bf3SStefano Zampini Mat B; 32969ae82921SPaul Mullowney 32979ae82921SPaul Mullowney PetscFunctionBegin; 3298832b2c02SStefano Zampini ierr = PetscCUDAInitializeCheck();CHKERRQ(ierr); /* first use of CUSPARSE may be via MatConvert */ 329949735bf3SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 330049735bf3SStefano Zampini ierr = MatDuplicate(A,MAT_COPY_VALUES,newmat);CHKERRQ(ierr); 330149735bf3SStefano Zampini } else if (reuse == MAT_REUSE_MATRIX) { 330249735bf3SStefano Zampini ierr = MatCopy(A,*newmat,SAME_NONZERO_PATTERN);CHKERRQ(ierr); 330349735bf3SStefano Zampini } 330449735bf3SStefano Zampini B = *newmat; 330549735bf3SStefano Zampini 330634136279SStefano Zampini ierr = PetscFree(B->defaultvectype);CHKERRQ(ierr); 330734136279SStefano Zampini ierr = PetscStrallocpy(VECCUDA,&B->defaultvectype);CHKERRQ(ierr); 330834136279SStefano Zampini 330949735bf3SStefano Zampini if (reuse != MAT_REUSE_MATRIX && !B->spptr) { 33109ae82921SPaul Mullowney if (B->factortype == MAT_FACTOR_NONE) { 3311e6e9a74fSStefano Zampini Mat_SeqAIJCUSPARSE *spptr; 3312e6e9a74fSStefano Zampini ierr = PetscNew(&spptr);CHKERRQ(ierr); 3313e6e9a74fSStefano Zampini stat = cusparseCreate(&spptr->handle);CHKERRCUSPARSE(stat); 3314a0e72f99SJunchao Zhang stat = cusparseSetStream(spptr->handle,PetscDefaultCudaStream);CHKERRCUSPARSE(stat); 33151a2c6b5cSJunchao Zhang spptr->format = MAT_CUSPARSE_CSR; 3316d8132acaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3317d8132acaSStefano Zampini spptr->spmvAlg = CUSPARSE_CSRMV_ALG1; /* default, since we only support csr */ 3318d8132acaSStefano Zampini spptr->spmmAlg = CUSPARSE_SPMM_CSR_ALG1; /* default, only support column-major dense matrix B */ 3319d8132acaSStefano Zampini spptr->csr2cscAlg = CUSPARSE_CSR2CSC_ALG1; 3320d8132acaSStefano Zampini #endif 33211a2c6b5cSJunchao Zhang B->spptr = spptr; 33229ae82921SPaul Mullowney } else { 3323e6e9a74fSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *spptr; 3324e6e9a74fSStefano Zampini 3325e6e9a74fSStefano Zampini ierr = PetscNew(&spptr);CHKERRQ(ierr); 3326e6e9a74fSStefano Zampini stat = cusparseCreate(&spptr->handle);CHKERRCUSPARSE(stat); 3327a0e72f99SJunchao Zhang stat = cusparseSetStream(spptr->handle,PetscDefaultCudaStream);CHKERRCUSPARSE(stat); 3328e6e9a74fSStefano Zampini B->spptr = spptr; 33299ae82921SPaul Mullowney } 3330e6e9a74fSStefano Zampini B->offloadmask = PETSC_OFFLOAD_UNALLOCATED; 333149735bf3SStefano Zampini } 3332693b0035SStefano Zampini B->ops->assemblyend = MatAssemblyEnd_SeqAIJCUSPARSE; 33339ae82921SPaul Mullowney B->ops->destroy = MatDestroy_SeqAIJCUSPARSE; 33341a2c6b5cSJunchao Zhang B->ops->setoption = MatSetOption_SeqAIJCUSPARSE; 33359ae82921SPaul Mullowney B->ops->setfromoptions = MatSetFromOptions_SeqAIJCUSPARSE; 333695639643SRichard Tran Mills B->ops->bindtocpu = MatBindToCPU_SeqAIJCUSPARSE; 3337693b0035SStefano Zampini B->ops->duplicate = MatDuplicate_SeqAIJCUSPARSE; 33382205254eSKarl Rupp 3339e6e9a74fSStefano Zampini ierr = MatBindToCPU_SeqAIJCUSPARSE(B,PETSC_FALSE);CHKERRQ(ierr); 33409ae82921SPaul Mullowney ierr = PetscObjectChangeTypeName((PetscObject)B,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 3341bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatCUSPARSESetFormat_C",MatCUSPARSESetFormat_SeqAIJCUSPARSE);CHKERRQ(ierr); 33429ae82921SPaul Mullowney PetscFunctionReturn(0); 33439ae82921SPaul Mullowney } 33449ae82921SPaul Mullowney 334502fe1965SBarry Smith PETSC_EXTERN PetscErrorCode MatCreate_SeqAIJCUSPARSE(Mat B) 334602fe1965SBarry Smith { 334702fe1965SBarry Smith PetscErrorCode ierr; 334802fe1965SBarry Smith 334902fe1965SBarry Smith PetscFunctionBegin; 335002fe1965SBarry Smith ierr = MatCreate_SeqAIJ(B);CHKERRQ(ierr); 33510ce8acdeSStefano Zampini ierr = MatConvert_SeqAIJ_SeqAIJCUSPARSE(B,MATSEQAIJCUSPARSE,MAT_INPLACE_MATRIX,&B);CHKERRQ(ierr); 335202fe1965SBarry Smith PetscFunctionReturn(0); 335302fe1965SBarry Smith } 335402fe1965SBarry Smith 33553ca39a21SBarry Smith /*MC 3356e057df02SPaul Mullowney MATSEQAIJCUSPARSE - MATAIJCUSPARSE = "(seq)aijcusparse" - A matrix type to be used for sparse matrices. 3357e057df02SPaul Mullowney 3358e057df02SPaul Mullowney A matrix type type whose data resides on Nvidia GPUs. These matrices can be in either 33592692e278SPaul Mullowney CSR, ELL, or Hybrid format. The ELL and HYB formats require CUDA 4.2 or later. 33602692e278SPaul Mullowney All matrix calculations are performed on Nvidia GPUs using the CUSPARSE library. 3361e057df02SPaul Mullowney 3362e057df02SPaul Mullowney Options Database Keys: 3363e057df02SPaul Mullowney + -mat_type aijcusparse - sets the matrix type to "seqaijcusparse" during a call to MatSetFromOptions() 3364aa372e3fSPaul Mullowney . -mat_cusparse_storage_format csr - sets the storage format of matrices (for MatMult and factors in MatSolve) during a call to MatSetFromOptions(). Other options include ell (ellpack) or hyb (hybrid). 3365a2b725a8SWilliam Gropp - -mat_cusparse_mult_storage_format csr - sets the storage format of matrices (for MatMult) during a call to MatSetFromOptions(). Other options include ell (ellpack) or hyb (hybrid). 3366e057df02SPaul Mullowney 3367e057df02SPaul Mullowney Level: beginner 3368e057df02SPaul Mullowney 33698468deeeSKarl Rupp .seealso: MatCreateSeqAIJCUSPARSE(), MATAIJCUSPARSE, MatCreateAIJCUSPARSE(), MatCUSPARSESetFormat(), MatCUSPARSEStorageFormat, MatCUSPARSEFormatOperation 3370e057df02SPaul Mullowney M*/ 33717f756511SDominic Meiser 3372bddcd29dSMark Adams PETSC_EXTERN PetscErrorCode MatGetFactor_seqaijcusparse_cusparse_band(Mat,MatFactorType,Mat*); 33730f39cd5aSBarry Smith 33743ca39a21SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_CUSPARSE(void) 337542c9c57cSBarry Smith { 337642c9c57cSBarry Smith PetscErrorCode ierr; 337742c9c57cSBarry Smith 337842c9c57cSBarry Smith PetscFunctionBegin; 3379bddcd29dSMark Adams ierr = MatSolverTypeRegister(MATSOLVERCUSPARSEBAND, MATSEQAIJ, MAT_FACTOR_LU,MatGetFactor_seqaijcusparse_cusparse_band);CHKERRQ(ierr); 33803ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_LU,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 33813ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_CHOLESKY,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 33823ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_ILU,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 33833ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_ICC,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 3384bddcd29dSMark Adams 338542c9c57cSBarry Smith PetscFunctionReturn(0); 338642c9c57cSBarry Smith } 338729b38603SBarry Smith 3388470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSE_Destroy(Mat_SeqAIJCUSPARSE **cusparsestruct) 33897f756511SDominic Meiser { 3390e6e9a74fSStefano Zampini PetscErrorCode ierr; 33917f756511SDominic Meiser cusparseStatus_t stat; 33927f756511SDominic Meiser 33937f756511SDominic Meiser PetscFunctionBegin; 33947f756511SDominic Meiser if (*cusparsestruct) { 3395e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*cusparsestruct)->mat,(*cusparsestruct)->format);CHKERRQ(ierr); 3396e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*cusparsestruct)->matTranspose,(*cusparsestruct)->format);CHKERRQ(ierr); 33977f756511SDominic Meiser delete (*cusparsestruct)->workVector; 339881902715SJunchao Zhang delete (*cusparsestruct)->rowoffsets_gpu; 33997e8381f9SStefano Zampini delete (*cusparsestruct)->cooPerm; 34007e8381f9SStefano Zampini delete (*cusparsestruct)->cooPerm_a; 3401a49f1ed0SStefano Zampini delete (*cusparsestruct)->csr2csc_i; 34027e8381f9SStefano Zampini if ((*cusparsestruct)->handle) {stat = cusparseDestroy((*cusparsestruct)->handle);CHKERRCUSPARSE(stat);} 3403e6e9a74fSStefano Zampini ierr = PetscFree(*cusparsestruct);CHKERRQ(ierr); 34047f756511SDominic Meiser } 34057f756511SDominic Meiser PetscFunctionReturn(0); 34067f756511SDominic Meiser } 34077f756511SDominic Meiser 34087f756511SDominic Meiser static PetscErrorCode CsrMatrix_Destroy(CsrMatrix **mat) 34097f756511SDominic Meiser { 34107f756511SDominic Meiser PetscFunctionBegin; 34117f756511SDominic Meiser if (*mat) { 34127f756511SDominic Meiser delete (*mat)->values; 34137f756511SDominic Meiser delete (*mat)->column_indices; 34147f756511SDominic Meiser delete (*mat)->row_offsets; 34157f756511SDominic Meiser delete *mat; 34167f756511SDominic Meiser *mat = 0; 34177f756511SDominic Meiser } 34187f756511SDominic Meiser PetscFunctionReturn(0); 34197f756511SDominic Meiser } 34207f756511SDominic Meiser 3421470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSETriFactorStruct **trifactor) 34227f756511SDominic Meiser { 34237f756511SDominic Meiser cusparseStatus_t stat; 34247f756511SDominic Meiser PetscErrorCode ierr; 34257f756511SDominic Meiser 34267f756511SDominic Meiser PetscFunctionBegin; 34277f756511SDominic Meiser if (*trifactor) { 342857d48284SJunchao Zhang if ((*trifactor)->descr) { stat = cusparseDestroyMatDescr((*trifactor)->descr);CHKERRCUSPARSE(stat); } 3429afb2bd1cSJunchao Zhang if ((*trifactor)->solveInfo) { stat = cusparse_destroy_analysis_info((*trifactor)->solveInfo);CHKERRCUSPARSE(stat); } 34307f756511SDominic Meiser ierr = CsrMatrix_Destroy(&(*trifactor)->csrMat);CHKERRQ(ierr); 34311b0a6780SStefano Zampini if ((*trifactor)->solveBuffer) {cudaError_t cerr = cudaFree((*trifactor)->solveBuffer);CHKERRCUDA(cerr);} 34322cbc15d9SMark if ((*trifactor)->AA_h) {cudaError_t cerr = cudaFreeHost((*trifactor)->AA_h);CHKERRCUDA(cerr);} 3433afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 34341b0a6780SStefano Zampini if ((*trifactor)->csr2cscBuffer) {cudaError_t cerr = cudaFree((*trifactor)->csr2cscBuffer);CHKERRCUDA(cerr);} 3435afb2bd1cSJunchao Zhang #endif 3436da79fbbcSStefano Zampini ierr = PetscFree(*trifactor);CHKERRQ(ierr); 34377f756511SDominic Meiser } 34387f756511SDominic Meiser PetscFunctionReturn(0); 34397f756511SDominic Meiser } 34407f756511SDominic Meiser 3441470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSEMultStruct **matstruct,MatCUSPARSEStorageFormat format) 34427f756511SDominic Meiser { 34437f756511SDominic Meiser CsrMatrix *mat; 34447f756511SDominic Meiser cusparseStatus_t stat; 34457f756511SDominic Meiser cudaError_t err; 34467f756511SDominic Meiser 34477f756511SDominic Meiser PetscFunctionBegin; 34487f756511SDominic Meiser if (*matstruct) { 34497f756511SDominic Meiser if ((*matstruct)->mat) { 34507f756511SDominic Meiser if (format==MAT_CUSPARSE_ELL || format==MAT_CUSPARSE_HYB) { 3451afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3452afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 3453afb2bd1cSJunchao Zhang #else 34547f756511SDominic Meiser cusparseHybMat_t hybMat = (cusparseHybMat_t)(*matstruct)->mat; 345557d48284SJunchao Zhang stat = cusparseDestroyHybMat(hybMat);CHKERRCUSPARSE(stat); 3456afb2bd1cSJunchao Zhang #endif 34577f756511SDominic Meiser } else { 34587f756511SDominic Meiser mat = (CsrMatrix*)(*matstruct)->mat; 34597f756511SDominic Meiser CsrMatrix_Destroy(&mat); 34607f756511SDominic Meiser } 34617f756511SDominic Meiser } 346257d48284SJunchao Zhang if ((*matstruct)->descr) { stat = cusparseDestroyMatDescr((*matstruct)->descr);CHKERRCUSPARSE(stat); } 34637f756511SDominic Meiser delete (*matstruct)->cprowIndices; 3464afb2bd1cSJunchao Zhang if ((*matstruct)->alpha_one) { err=cudaFree((*matstruct)->alpha_one);CHKERRCUDA(err); } 34657656d835SStefano Zampini if ((*matstruct)->beta_zero) { err=cudaFree((*matstruct)->beta_zero);CHKERRCUDA(err); } 34667656d835SStefano Zampini if ((*matstruct)->beta_one) { err=cudaFree((*matstruct)->beta_one);CHKERRCUDA(err); } 3467afb2bd1cSJunchao Zhang 3468afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3469afb2bd1cSJunchao Zhang Mat_SeqAIJCUSPARSEMultStruct *mdata = *matstruct; 3470afb2bd1cSJunchao Zhang if (mdata->matDescr) {stat = cusparseDestroySpMat(mdata->matDescr);CHKERRCUSPARSE(stat);} 3471afb2bd1cSJunchao Zhang for (int i=0; i<3; i++) { 3472afb2bd1cSJunchao Zhang if (mdata->cuSpMV[i].initialized) { 3473afb2bd1cSJunchao Zhang err = cudaFree(mdata->cuSpMV[i].spmvBuffer);CHKERRCUDA(err); 3474afb2bd1cSJunchao Zhang stat = cusparseDestroyDnVec(mdata->cuSpMV[i].vecXDescr);CHKERRCUSPARSE(stat); 3475afb2bd1cSJunchao Zhang stat = cusparseDestroyDnVec(mdata->cuSpMV[i].vecYDescr);CHKERRCUSPARSE(stat); 3476afb2bd1cSJunchao Zhang } 3477afb2bd1cSJunchao Zhang } 3478afb2bd1cSJunchao Zhang #endif 34797f756511SDominic Meiser delete *matstruct; 34807e8381f9SStefano Zampini *matstruct = NULL; 34817f756511SDominic Meiser } 34827f756511SDominic Meiser PetscFunctionReturn(0); 34837f756511SDominic Meiser } 34847f756511SDominic Meiser 3485e8d2b73aSMark Adams PetscErrorCode MatSeqAIJCUSPARSETriFactors_Reset(Mat_SeqAIJCUSPARSETriFactors_p* trifactors) 34867f756511SDominic Meiser { 3487e6e9a74fSStefano Zampini PetscErrorCode ierr; 3488e6e9a74fSStefano Zampini 34897f756511SDominic Meiser PetscFunctionBegin; 34907f756511SDominic Meiser if (*trifactors) { 3491e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->loTriFactorPtr);CHKERRQ(ierr); 3492e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->upTriFactorPtr);CHKERRQ(ierr); 3493e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->loTriFactorPtrTranspose);CHKERRQ(ierr); 3494e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->upTriFactorPtrTranspose);CHKERRQ(ierr); 34957f756511SDominic Meiser delete (*trifactors)->rpermIndices; 34967f756511SDominic Meiser delete (*trifactors)->cpermIndices; 34977f756511SDominic Meiser delete (*trifactors)->workVector; 34987e8381f9SStefano Zampini (*trifactors)->rpermIndices = NULL; 34997e8381f9SStefano Zampini (*trifactors)->cpermIndices = NULL; 35007e8381f9SStefano Zampini (*trifactors)->workVector = NULL; 3501bddcd29dSMark Adams if ((*trifactors)->a_band_d) {cudaError_t cerr = cudaFree((*trifactors)->a_band_d);CHKERRCUDA(cerr);} 3502bddcd29dSMark Adams if ((*trifactors)->i_band_d) {cudaError_t cerr = cudaFree((*trifactors)->i_band_d);CHKERRCUDA(cerr);} 3503e8d2b73aSMark Adams (*trifactors)->init_dev_prop = PETSC_FALSE; 3504ccdfe979SStefano Zampini } 3505ccdfe979SStefano Zampini PetscFunctionReturn(0); 3506ccdfe979SStefano Zampini } 3507ccdfe979SStefano Zampini 3508ccdfe979SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSETriFactors_Destroy(Mat_SeqAIJCUSPARSETriFactors** trifactors) 3509ccdfe979SStefano Zampini { 3510e6e9a74fSStefano Zampini PetscErrorCode ierr; 3511ccdfe979SStefano Zampini cusparseHandle_t handle; 3512ccdfe979SStefano Zampini cusparseStatus_t stat; 3513ccdfe979SStefano Zampini 3514ccdfe979SStefano Zampini PetscFunctionBegin; 3515ccdfe979SStefano Zampini if (*trifactors) { 3516e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(trifactors);CHKERRQ(ierr); 35177f756511SDominic Meiser if (handle = (*trifactors)->handle) { 351857d48284SJunchao Zhang stat = cusparseDestroy(handle);CHKERRCUSPARSE(stat); 35197f756511SDominic Meiser } 3520e6e9a74fSStefano Zampini ierr = PetscFree(*trifactors);CHKERRQ(ierr); 35217f756511SDominic Meiser } 35227f756511SDominic Meiser PetscFunctionReturn(0); 35237f756511SDominic Meiser } 35247e8381f9SStefano Zampini 35257e8381f9SStefano Zampini struct IJCompare 35267e8381f9SStefano Zampini { 35277e8381f9SStefano Zampini __host__ __device__ 35287e8381f9SStefano Zampini inline bool operator() (const thrust::tuple<PetscInt, PetscInt> &t1, const thrust::tuple<PetscInt, PetscInt> &t2) 35297e8381f9SStefano Zampini { 35307e8381f9SStefano Zampini if (t1.get<0>() < t2.get<0>()) return true; 35317e8381f9SStefano Zampini if (t1.get<0>() == t2.get<0>()) return t1.get<1>() < t2.get<1>(); 35327e8381f9SStefano Zampini return false; 35337e8381f9SStefano Zampini } 35347e8381f9SStefano Zampini }; 35357e8381f9SStefano Zampini 35367e8381f9SStefano Zampini struct IJEqual 35377e8381f9SStefano Zampini { 35387e8381f9SStefano Zampini __host__ __device__ 35397e8381f9SStefano Zampini inline bool operator() (const thrust::tuple<PetscInt, PetscInt> &t1, const thrust::tuple<PetscInt, PetscInt> &t2) 35407e8381f9SStefano Zampini { 35417e8381f9SStefano Zampini if (t1.get<0>() != t2.get<0>() || t1.get<1>() != t2.get<1>()) return false; 35427e8381f9SStefano Zampini return true; 35437e8381f9SStefano Zampini } 35447e8381f9SStefano Zampini }; 35457e8381f9SStefano Zampini 35467e8381f9SStefano Zampini struct IJDiff 35477e8381f9SStefano Zampini { 35487e8381f9SStefano Zampini __host__ __device__ 35497e8381f9SStefano Zampini inline PetscInt operator() (const PetscInt &t1, const PetscInt &t2) 35507e8381f9SStefano Zampini { 35517e8381f9SStefano Zampini return t1 == t2 ? 0 : 1; 35527e8381f9SStefano Zampini } 35537e8381f9SStefano Zampini }; 35547e8381f9SStefano Zampini 35557e8381f9SStefano Zampini struct IJSum 35567e8381f9SStefano Zampini { 35577e8381f9SStefano Zampini __host__ __device__ 35587e8381f9SStefano Zampini inline PetscInt operator() (const PetscInt &t1, const PetscInt &t2) 35597e8381f9SStefano Zampini { 35607e8381f9SStefano Zampini return t1||t2; 35617e8381f9SStefano Zampini } 35627e8381f9SStefano Zampini }; 35637e8381f9SStefano Zampini 35647e8381f9SStefano Zampini #include <thrust/iterator/discard_iterator.h> 3565e61fc153SStefano Zampini PetscErrorCode MatSetValuesCOO_SeqAIJCUSPARSE(Mat A, const PetscScalar v[], InsertMode imode) 35667e8381f9SStefano Zampini { 35677e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3568fcdce8c4SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 3569bfcc3627SStefano Zampini THRUSTARRAY *cooPerm_v = NULL; 357008391a17SStefano Zampini thrust::device_ptr<const PetscScalar> d_v; 35717e8381f9SStefano Zampini CsrMatrix *matrix; 35727e8381f9SStefano Zampini PetscErrorCode ierr; 35737e8381f9SStefano Zampini PetscInt n; 35747e8381f9SStefano Zampini 35757e8381f9SStefano Zampini PetscFunctionBegin; 35767e8381f9SStefano Zampini if (!cusp) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUSPARSE struct"); 35777e8381f9SStefano Zampini if (!cusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUSPARSE CsrMatrix"); 35787e8381f9SStefano Zampini if (!cusp->cooPerm) { 35797e8381f9SStefano Zampini ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 35807e8381f9SStefano Zampini ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 35817e8381f9SStefano Zampini PetscFunctionReturn(0); 35827e8381f9SStefano Zampini } 35837e8381f9SStefano Zampini matrix = (CsrMatrix*)cusp->mat->mat; 35847e8381f9SStefano Zampini if (!matrix->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 3585e61fc153SStefano Zampini if (!v) { 3586e61fc153SStefano Zampini if (imode == INSERT_VALUES) thrust::fill(thrust::device,matrix->values->begin(),matrix->values->end(),0.); 3587e61fc153SStefano Zampini goto finalize; 35887e8381f9SStefano Zampini } 3589e61fc153SStefano Zampini n = cusp->cooPerm->size(); 359008391a17SStefano Zampini if (isCudaMem(v)) { 359108391a17SStefano Zampini d_v = thrust::device_pointer_cast(v); 359208391a17SStefano Zampini } else { 3593e61fc153SStefano Zampini cooPerm_v = new THRUSTARRAY(n); 3594e61fc153SStefano Zampini cooPerm_v->assign(v,v+n); 359508391a17SStefano Zampini d_v = cooPerm_v->data(); 3596e61fc153SStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscScalar));CHKERRQ(ierr); 359708391a17SStefano Zampini } 3598bfcc3627SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3599e61fc153SStefano Zampini if (imode == ADD_VALUES) { /* ADD VALUES means add to existing ones */ 36007e8381f9SStefano Zampini if (cusp->cooPerm_a) { 3601bfcc3627SStefano Zampini THRUSTARRAY *cooPerm_w = new THRUSTARRAY(matrix->values->size()); 360208391a17SStefano Zampini auto vbit = thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()); 3603e61fc153SStefano Zampini thrust::reduce_by_key(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),vbit,thrust::make_discard_iterator(),cooPerm_w->begin(),thrust::equal_to<PetscInt>(),thrust::plus<PetscScalar>()); 3604e61fc153SStefano Zampini thrust::transform(cooPerm_w->begin(),cooPerm_w->end(),matrix->values->begin(),matrix->values->begin(),thrust::plus<PetscScalar>()); 3605e61fc153SStefano Zampini delete cooPerm_w; 36067e8381f9SStefano Zampini } else { 360708391a17SStefano Zampini auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()), 36087e8381f9SStefano Zampini matrix->values->begin())); 360908391a17SStefano Zampini auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->end()), 36107e8381f9SStefano Zampini matrix->values->end())); 36117e8381f9SStefano Zampini thrust::for_each(zibit,zieit,VecCUDAPlusEquals()); 36127e8381f9SStefano Zampini } 36137e8381f9SStefano Zampini } else { 3614e61fc153SStefano Zampini if (cusp->cooPerm_a) { /* repeated entries in COO, with INSERT_VALUES -> reduce */ 361508391a17SStefano Zampini auto vbit = thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()); 3616e61fc153SStefano Zampini thrust::reduce_by_key(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),vbit,thrust::make_discard_iterator(),matrix->values->begin(),thrust::equal_to<PetscInt>(),thrust::plus<PetscScalar>()); 36177e8381f9SStefano Zampini } else { 361808391a17SStefano Zampini auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()), 36197e8381f9SStefano Zampini matrix->values->begin())); 362008391a17SStefano Zampini auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->end()), 36217e8381f9SStefano Zampini matrix->values->end())); 36227e8381f9SStefano Zampini thrust::for_each(zibit,zieit,VecCUDAEquals()); 36237e8381f9SStefano Zampini } 36247e8381f9SStefano Zampini } 3625bfcc3627SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3626e61fc153SStefano Zampini finalize: 3627e61fc153SStefano Zampini delete cooPerm_v; 36287e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 3629e61fc153SStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr); 3630fcdce8c4SStefano Zampini /* shorter version of MatAssemblyEnd_SeqAIJ */ 3631fcdce8c4SStefano Zampini ierr = PetscInfo3(A,"Matrix size: %D X %D; storage space: 0 unneeded,%D used\n",A->rmap->n,A->cmap->n,a->nz);CHKERRQ(ierr); 3632fcdce8c4SStefano Zampini ierr = PetscInfo(A,"Number of mallocs during MatSetValues() is 0\n");CHKERRQ(ierr); 3633fcdce8c4SStefano Zampini ierr = PetscInfo1(A,"Maximum nonzeros in any row is %D\n",a->rmax);CHKERRQ(ierr); 3634fcdce8c4SStefano Zampini a->reallocs = 0; 3635fcdce8c4SStefano Zampini A->info.mallocs += 0; 3636fcdce8c4SStefano Zampini A->info.nz_unneeded = 0; 3637fcdce8c4SStefano Zampini A->assembled = A->was_assembled = PETSC_TRUE; 3638fcdce8c4SStefano Zampini A->num_ass++; 36397e8381f9SStefano Zampini PetscFunctionReturn(0); 36407e8381f9SStefano Zampini } 36417e8381f9SStefano Zampini 3642a49f1ed0SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEInvalidateTranspose(Mat A, PetscBool destroy) 3643a49f1ed0SStefano Zampini { 3644a49f1ed0SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3645a49f1ed0SStefano Zampini PetscErrorCode ierr; 3646a49f1ed0SStefano Zampini 3647a49f1ed0SStefano Zampini PetscFunctionBegin; 3648a49f1ed0SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3649a49f1ed0SStefano Zampini if (!cusp) PetscFunctionReturn(0); 3650a49f1ed0SStefano Zampini if (destroy) { 3651a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&cusp->matTranspose,cusp->format);CHKERRQ(ierr); 3652a49f1ed0SStefano Zampini delete cusp->csr2csc_i; 3653a49f1ed0SStefano Zampini cusp->csr2csc_i = NULL; 3654a49f1ed0SStefano Zampini } 36551a2c6b5cSJunchao Zhang A->transupdated = PETSC_FALSE; 3656a49f1ed0SStefano Zampini PetscFunctionReturn(0); 3657a49f1ed0SStefano Zampini } 3658a49f1ed0SStefano Zampini 36597e8381f9SStefano Zampini #include <thrust/binary_search.h> 3660e61fc153SStefano Zampini PetscErrorCode MatSetPreallocationCOO_SeqAIJCUSPARSE(Mat A, PetscInt n, const PetscInt coo_i[], const PetscInt coo_j[]) 36617e8381f9SStefano Zampini { 36627e8381f9SStefano Zampini PetscErrorCode ierr; 36637e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 36647e8381f9SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 36657e8381f9SStefano Zampini PetscInt cooPerm_n, nzr = 0; 36667e8381f9SStefano Zampini cudaError_t cerr; 36677e8381f9SStefano Zampini 36687e8381f9SStefano Zampini PetscFunctionBegin; 36697e8381f9SStefano Zampini ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr); 36707e8381f9SStefano Zampini ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr); 36717e8381f9SStefano Zampini cooPerm_n = cusp->cooPerm ? cusp->cooPerm->size() : 0; 36727e8381f9SStefano Zampini if (n != cooPerm_n) { 36737e8381f9SStefano Zampini delete cusp->cooPerm; 36747e8381f9SStefano Zampini delete cusp->cooPerm_a; 36757e8381f9SStefano Zampini cusp->cooPerm = NULL; 36767e8381f9SStefano Zampini cusp->cooPerm_a = NULL; 36777e8381f9SStefano Zampini } 36787e8381f9SStefano Zampini if (n) { 36797e8381f9SStefano Zampini THRUSTINTARRAY d_i(n); 36807e8381f9SStefano Zampini THRUSTINTARRAY d_j(n); 36817e8381f9SStefano Zampini THRUSTINTARRAY ii(A->rmap->n); 36827e8381f9SStefano Zampini 36837e8381f9SStefano Zampini if (!cusp->cooPerm) { cusp->cooPerm = new THRUSTINTARRAY(n); } 36847e8381f9SStefano Zampini if (!cusp->cooPerm_a) { cusp->cooPerm_a = new THRUSTINTARRAY(n); } 36857e8381f9SStefano Zampini 36867e8381f9SStefano Zampini ierr = PetscLogCpuToGpu(2.*n*sizeof(PetscInt));CHKERRQ(ierr); 36877e8381f9SStefano Zampini d_i.assign(coo_i,coo_i+n); 36887e8381f9SStefano Zampini d_j.assign(coo_j,coo_j+n); 36897e8381f9SStefano Zampini auto fkey = thrust::make_zip_iterator(thrust::make_tuple(d_i.begin(),d_j.begin())); 36907e8381f9SStefano Zampini auto ekey = thrust::make_zip_iterator(thrust::make_tuple(d_i.end(),d_j.end())); 36917e8381f9SStefano Zampini 369208391a17SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 36937e8381f9SStefano Zampini thrust::sequence(thrust::device, cusp->cooPerm->begin(), cusp->cooPerm->end(), 0); 36947e8381f9SStefano Zampini thrust::sort_by_key(fkey, ekey, cusp->cooPerm->begin(), IJCompare()); 36957e8381f9SStefano Zampini *cusp->cooPerm_a = d_i; 36967e8381f9SStefano Zampini THRUSTINTARRAY w = d_j; 36977e8381f9SStefano Zampini 36987e8381f9SStefano Zampini auto nekey = thrust::unique(fkey, ekey, IJEqual()); 36997e8381f9SStefano Zampini if (nekey == ekey) { /* all entries are unique */ 37007e8381f9SStefano Zampini delete cusp->cooPerm_a; 37017e8381f9SStefano Zampini cusp->cooPerm_a = NULL; 37027e8381f9SStefano Zampini } else { /* I couldn't come up with a more elegant algorithm */ 37037e8381f9SStefano Zampini adjacent_difference(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),cusp->cooPerm_a->begin(),IJDiff()); 37047e8381f9SStefano Zampini adjacent_difference(w.begin(),w.end(),w.begin(),IJDiff()); 37057e8381f9SStefano Zampini (*cusp->cooPerm_a)[0] = 0; 37067e8381f9SStefano Zampini w[0] = 0; 37077e8381f9SStefano Zampini thrust::transform(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),w.begin(),cusp->cooPerm_a->begin(),IJSum()); 37087e8381f9SStefano Zampini thrust::inclusive_scan(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),cusp->cooPerm_a->begin(),thrust::plus<PetscInt>()); 37097e8381f9SStefano Zampini } 37107e8381f9SStefano Zampini thrust::counting_iterator<PetscInt> search_begin(0); 37117e8381f9SStefano Zampini thrust::upper_bound(d_i.begin(), nekey.get_iterator_tuple().get<0>(), 37127e8381f9SStefano Zampini search_begin, search_begin + A->rmap->n, 37137e8381f9SStefano Zampini ii.begin()); 371408391a17SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 37157e8381f9SStefano Zampini 37167e8381f9SStefano Zampini ierr = MatSeqXAIJFreeAIJ(A,&a->a,&a->j,&a->i);CHKERRQ(ierr); 37177e8381f9SStefano Zampini a->singlemalloc = PETSC_FALSE; 37187e8381f9SStefano Zampini a->free_a = PETSC_TRUE; 37197e8381f9SStefano Zampini a->free_ij = PETSC_TRUE; 37207e8381f9SStefano Zampini ierr = PetscMalloc1(A->rmap->n+1,&a->i);CHKERRQ(ierr); 37217e8381f9SStefano Zampini a->i[0] = 0; 37227e8381f9SStefano Zampini cerr = cudaMemcpy(a->i+1,ii.data().get(),A->rmap->n*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 37237e8381f9SStefano Zampini a->nz = a->maxnz = a->i[A->rmap->n]; 3724fcdce8c4SStefano Zampini a->rmax = 0; 37257e8381f9SStefano Zampini ierr = PetscMalloc1(a->nz,&a->a);CHKERRQ(ierr); 37267e8381f9SStefano Zampini ierr = PetscMalloc1(a->nz,&a->j);CHKERRQ(ierr); 37277e8381f9SStefano Zampini cerr = cudaMemcpy(a->j,d_j.data().get(),a->nz*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 37287e8381f9SStefano Zampini if (!a->ilen) { ierr = PetscMalloc1(A->rmap->n,&a->ilen);CHKERRQ(ierr); } 37297e8381f9SStefano Zampini if (!a->imax) { ierr = PetscMalloc1(A->rmap->n,&a->imax);CHKERRQ(ierr); } 37307e8381f9SStefano Zampini for (PetscInt i = 0; i < A->rmap->n; i++) { 37317e8381f9SStefano Zampini const PetscInt nnzr = a->i[i+1] - a->i[i]; 37327e8381f9SStefano Zampini nzr += (PetscInt)!!(nnzr); 37337e8381f9SStefano Zampini a->ilen[i] = a->imax[i] = nnzr; 3734fcdce8c4SStefano Zampini a->rmax = PetscMax(a->rmax,nnzr); 37357e8381f9SStefano Zampini } 3736fcdce8c4SStefano Zampini a->nonzerorowcnt = nzr; 37377e8381f9SStefano Zampini A->preallocated = PETSC_TRUE; 37387e8381f9SStefano Zampini ierr = PetscLogGpuToCpu((A->rmap->n+a->nz)*sizeof(PetscInt));CHKERRQ(ierr); 3739fcdce8c4SStefano Zampini ierr = MatMarkDiagonal_SeqAIJ(A);CHKERRQ(ierr); 37407e8381f9SStefano Zampini } else { 37417e8381f9SStefano Zampini ierr = MatSeqAIJSetPreallocation(A,0,NULL);CHKERRQ(ierr); 37427e8381f9SStefano Zampini } 3743e61fc153SStefano Zampini ierr = MatSetOption(A,MAT_NEW_NONZERO_ALLOCATION_ERR,PETSC_TRUE);CHKERRQ(ierr); 37447e8381f9SStefano Zampini 37457e8381f9SStefano Zampini /* We want to allocate the CUSPARSE struct for matvec now. 3746e61fc153SStefano Zampini The code is so convoluted now that I prefer to copy zeros */ 3747e61fc153SStefano Zampini ierr = PetscArrayzero(a->a,a->nz);CHKERRQ(ierr); 37487e8381f9SStefano Zampini ierr = MatCheckCompressedRow(A,nzr,&a->compressedrow,a->i,A->rmap->n,0.6);CHKERRQ(ierr); 37497e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_CPU; 37507e8381f9SStefano Zampini A->nonzerostate++; 37517e8381f9SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 3752a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr); 37537e8381f9SStefano Zampini 37547e8381f9SStefano Zampini A->assembled = PETSC_FALSE; 37557e8381f9SStefano Zampini A->was_assembled = PETSC_FALSE; 37567e8381f9SStefano Zampini PetscFunctionReturn(0); 37577e8381f9SStefano Zampini } 3758ed502f03SStefano Zampini 3759ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetArrayRead(Mat A, const PetscScalar** a) 3760ed502f03SStefano Zampini { 3761ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3762ed502f03SStefano Zampini CsrMatrix *csr; 3763ed502f03SStefano Zampini PetscErrorCode ierr; 3764ed502f03SStefano Zampini 3765ed502f03SStefano Zampini PetscFunctionBegin; 3766ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3767ed502f03SStefano Zampini PetscValidPointer(a,2); 3768ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3769ed502f03SStefano Zampini if (cusp->format == MAT_CUSPARSE_ELL || cusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 3770ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 377133c9ba73SStefano Zampini if (!cusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 3772ed502f03SStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 3773ed502f03SStefano Zampini if (!csr->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 3774ed502f03SStefano Zampini *a = csr->values->data().get(); 3775ed502f03SStefano Zampini PetscFunctionReturn(0); 3776ed502f03SStefano Zampini } 3777ed502f03SStefano Zampini 3778ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreArrayRead(Mat A, const PetscScalar** a) 3779ed502f03SStefano Zampini { 3780ed502f03SStefano Zampini PetscFunctionBegin; 3781ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3782ed502f03SStefano Zampini PetscValidPointer(a,2); 3783ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3784ed502f03SStefano Zampini *a = NULL; 3785ed502f03SStefano Zampini PetscFunctionReturn(0); 3786ed502f03SStefano Zampini } 3787ed502f03SStefano Zampini 3788039c6fbaSStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetArray(Mat A, PetscScalar** a) 3789039c6fbaSStefano Zampini { 3790039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3791039c6fbaSStefano Zampini CsrMatrix *csr; 3792039c6fbaSStefano Zampini PetscErrorCode ierr; 3793039c6fbaSStefano Zampini 3794039c6fbaSStefano Zampini PetscFunctionBegin; 3795039c6fbaSStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3796039c6fbaSStefano Zampini PetscValidPointer(a,2); 3797039c6fbaSStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3798039c6fbaSStefano Zampini if (cusp->format == MAT_CUSPARSE_ELL || cusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 3799039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 380033c9ba73SStefano Zampini if (!cusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 3801039c6fbaSStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 3802039c6fbaSStefano Zampini if (!csr->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 3803039c6fbaSStefano Zampini *a = csr->values->data().get(); 3804039c6fbaSStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 3805a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_FALSE);CHKERRQ(ierr); 3806039c6fbaSStefano Zampini PetscFunctionReturn(0); 3807039c6fbaSStefano Zampini } 3808039c6fbaSStefano Zampini 3809039c6fbaSStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreArray(Mat A, PetscScalar** a) 3810039c6fbaSStefano Zampini { 3811039c6fbaSStefano Zampini PetscErrorCode ierr; 3812039c6fbaSStefano Zampini 3813039c6fbaSStefano Zampini PetscFunctionBegin; 3814039c6fbaSStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3815039c6fbaSStefano Zampini PetscValidPointer(a,2); 3816039c6fbaSStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3817039c6fbaSStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr); 3818039c6fbaSStefano Zampini *a = NULL; 3819039c6fbaSStefano Zampini PetscFunctionReturn(0); 3820039c6fbaSStefano Zampini } 3821039c6fbaSStefano Zampini 3822ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetArrayWrite(Mat A, PetscScalar** a) 3823ed502f03SStefano Zampini { 3824ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3825ed502f03SStefano Zampini CsrMatrix *csr; 3826a49f1ed0SStefano Zampini PetscErrorCode ierr; 3827ed502f03SStefano Zampini 3828ed502f03SStefano Zampini PetscFunctionBegin; 3829ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3830ed502f03SStefano Zampini PetscValidPointer(a,2); 3831ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3832ed502f03SStefano Zampini if (cusp->format == MAT_CUSPARSE_ELL || cusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 383333c9ba73SStefano Zampini if (!cusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 3834ed502f03SStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 3835ed502f03SStefano Zampini if (!csr->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 3836ed502f03SStefano Zampini *a = csr->values->data().get(); 3837039c6fbaSStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 3838a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_FALSE);CHKERRQ(ierr); 3839ed502f03SStefano Zampini PetscFunctionReturn(0); 3840ed502f03SStefano Zampini } 3841ed502f03SStefano Zampini 3842ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreArrayWrite(Mat A, PetscScalar** a) 3843ed502f03SStefano Zampini { 3844ed502f03SStefano Zampini PetscErrorCode ierr; 3845ed502f03SStefano Zampini 3846ed502f03SStefano Zampini PetscFunctionBegin; 3847ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3848ed502f03SStefano Zampini PetscValidPointer(a,2); 3849ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3850ed502f03SStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr); 3851ed502f03SStefano Zampini *a = NULL; 3852ed502f03SStefano Zampini PetscFunctionReturn(0); 3853ed502f03SStefano Zampini } 3854ed502f03SStefano Zampini 3855ed502f03SStefano Zampini struct IJCompare4 3856ed502f03SStefano Zampini { 3857ed502f03SStefano Zampini __host__ __device__ 38582ed87e7eSStefano Zampini inline bool operator() (const thrust::tuple<int, int, PetscScalar, int> &t1, const thrust::tuple<int, int, PetscScalar, int> &t2) 3859ed502f03SStefano Zampini { 3860ed502f03SStefano Zampini if (t1.get<0>() < t2.get<0>()) return true; 3861ed502f03SStefano Zampini if (t1.get<0>() == t2.get<0>()) return t1.get<1>() < t2.get<1>(); 3862ed502f03SStefano Zampini return false; 3863ed502f03SStefano Zampini } 3864ed502f03SStefano Zampini }; 3865ed502f03SStefano Zampini 38668909a122SStefano Zampini struct Shift 38678909a122SStefano Zampini { 3868ed502f03SStefano Zampini int _shift; 3869ed502f03SStefano Zampini 3870ed502f03SStefano Zampini Shift(int shift) : _shift(shift) {} 3871ed502f03SStefano Zampini __host__ __device__ 3872ed502f03SStefano Zampini inline int operator() (const int &c) 3873ed502f03SStefano Zampini { 3874ed502f03SStefano Zampini return c + _shift; 3875ed502f03SStefano Zampini } 3876ed502f03SStefano Zampini }; 3877ed502f03SStefano Zampini 3878ed502f03SStefano Zampini /* merges to SeqAIJCUSPARSE matrices, [A';B']' operation in matlab notation */ 3879ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEMergeMats(Mat A,Mat B,MatReuse reuse,Mat* C) 3880ed502f03SStefano Zampini { 3881ed502f03SStefano Zampini PetscErrorCode ierr; 3882ed502f03SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data, *b = (Mat_SeqAIJ*)B->data, *c; 3883ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr, *Bcusp = (Mat_SeqAIJCUSPARSE*)B->spptr, *Ccusp; 3884ed502f03SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Cmat; 3885ed502f03SStefano Zampini CsrMatrix *Acsr,*Bcsr,*Ccsr; 3886ed502f03SStefano Zampini PetscInt Annz,Bnnz; 3887ed502f03SStefano Zampini cusparseStatus_t stat; 3888ed502f03SStefano Zampini PetscInt i,m,n,zero = 0; 3889ed502f03SStefano Zampini cudaError_t cerr; 3890ed502f03SStefano Zampini 3891ed502f03SStefano Zampini PetscFunctionBegin; 3892ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3893ed502f03SStefano Zampini PetscValidHeaderSpecific(B,MAT_CLASSID,2); 3894ed502f03SStefano Zampini PetscValidPointer(C,4); 3895ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3896ed502f03SStefano Zampini PetscCheckTypeName(B,MATSEQAIJCUSPARSE); 3897ed502f03SStefano Zampini if (A->rmap->n != B->rmap->n) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Invalid number or rows %D != %D",A->rmap->n,B->rmap->n); 3898ed502f03SStefano Zampini if (reuse == MAT_INPLACE_MATRIX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_INPLACE_MATRIX not supported"); 3899ed502f03SStefano Zampini if (Acusp->format == MAT_CUSPARSE_ELL || Acusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 3900ed502f03SStefano Zampini if (Bcusp->format == MAT_CUSPARSE_ELL || Bcusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 3901ed502f03SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 3902ed502f03SStefano Zampini m = A->rmap->n; 3903ed502f03SStefano Zampini n = A->cmap->n + B->cmap->n; 3904ed502f03SStefano Zampini ierr = MatCreate(PETSC_COMM_SELF,C);CHKERRQ(ierr); 3905ed502f03SStefano Zampini ierr = MatSetSizes(*C,m,n,m,n);CHKERRQ(ierr); 3906ed502f03SStefano Zampini ierr = MatSetType(*C,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 3907ed502f03SStefano Zampini c = (Mat_SeqAIJ*)(*C)->data; 3908ed502f03SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)(*C)->spptr; 3909ed502f03SStefano Zampini Cmat = new Mat_SeqAIJCUSPARSEMultStruct; 3910ed502f03SStefano Zampini Ccsr = new CsrMatrix; 3911ed502f03SStefano Zampini Cmat->cprowIndices = NULL; 3912ed502f03SStefano Zampini c->compressedrow.use = PETSC_FALSE; 3913ed502f03SStefano Zampini c->compressedrow.nrows = 0; 3914ed502f03SStefano Zampini c->compressedrow.i = NULL; 3915ed502f03SStefano Zampini c->compressedrow.rindex = NULL; 3916ed502f03SStefano Zampini Ccusp->workVector = NULL; 3917ed502f03SStefano Zampini Ccusp->nrows = m; 3918ed502f03SStefano Zampini Ccusp->mat = Cmat; 3919ed502f03SStefano Zampini Ccusp->mat->mat = Ccsr; 3920ed502f03SStefano Zampini Ccsr->num_rows = m; 3921ed502f03SStefano Zampini Ccsr->num_cols = n; 3922ed502f03SStefano Zampini stat = cusparseCreateMatDescr(&Cmat->descr);CHKERRCUSPARSE(stat); 3923ed502f03SStefano Zampini stat = cusparseSetMatIndexBase(Cmat->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 3924ed502f03SStefano Zampini stat = cusparseSetMatType(Cmat->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 3925ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->alpha_one),sizeof(PetscScalar));CHKERRCUDA(cerr); 3926ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_zero),sizeof(PetscScalar));CHKERRCUDA(cerr); 3927ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_one), sizeof(PetscScalar));CHKERRCUDA(cerr); 3928ed502f03SStefano Zampini cerr = cudaMemcpy(Cmat->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 3929ed502f03SStefano Zampini cerr = cudaMemcpy(Cmat->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 3930ed502f03SStefano Zampini cerr = cudaMemcpy(Cmat->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 3931ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 3932ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 39331a2c6b5cSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTransposeForMult(A);CHKERRQ(ierr); 39341a2c6b5cSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTransposeForMult(B);CHKERRQ(ierr); 3935ed502f03SStefano Zampini if (!Acusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 3936ed502f03SStefano Zampini if (!Bcusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 3937ed502f03SStefano Zampini 3938ed502f03SStefano Zampini Acsr = (CsrMatrix*)Acusp->mat->mat; 3939ed502f03SStefano Zampini Bcsr = (CsrMatrix*)Bcusp->mat->mat; 3940ed502f03SStefano Zampini Annz = (PetscInt)Acsr->column_indices->size(); 3941ed502f03SStefano Zampini Bnnz = (PetscInt)Bcsr->column_indices->size(); 3942ed502f03SStefano Zampini c->nz = Annz + Bnnz; 3943ed502f03SStefano Zampini Ccsr->row_offsets = new THRUSTINTARRAY32(m+1); 3944ed502f03SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 3945ed502f03SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 3946ed502f03SStefano Zampini Ccsr->num_entries = c->nz; 3947ed502f03SStefano Zampini Ccusp->cooPerm = new THRUSTINTARRAY(c->nz); 3948ed502f03SStefano Zampini if (c->nz) { 39492ed87e7eSStefano Zampini auto Acoo = new THRUSTINTARRAY32(Annz); 39502ed87e7eSStefano Zampini auto Bcoo = new THRUSTINTARRAY32(Bnnz); 39512ed87e7eSStefano Zampini auto Ccoo = new THRUSTINTARRAY32(c->nz); 39522ed87e7eSStefano Zampini THRUSTINTARRAY32 *Aroff,*Broff; 39532ed87e7eSStefano Zampini 3954ed502f03SStefano Zampini if (a->compressedrow.use) { /* need full row offset */ 3955ed502f03SStefano Zampini if (!Acusp->rowoffsets_gpu) { 3956ed502f03SStefano Zampini Acusp->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n + 1); 3957ed502f03SStefano Zampini Acusp->rowoffsets_gpu->assign(a->i,a->i + A->rmap->n + 1); 3958ed502f03SStefano Zampini ierr = PetscLogCpuToGpu((A->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 3959ed502f03SStefano Zampini } 39602ed87e7eSStefano Zampini Aroff = Acusp->rowoffsets_gpu; 39612ed87e7eSStefano Zampini } else Aroff = Acsr->row_offsets; 3962ed502f03SStefano Zampini if (b->compressedrow.use) { /* need full row offset */ 3963ed502f03SStefano Zampini if (!Bcusp->rowoffsets_gpu) { 3964ed502f03SStefano Zampini Bcusp->rowoffsets_gpu = new THRUSTINTARRAY32(B->rmap->n + 1); 3965ed502f03SStefano Zampini Bcusp->rowoffsets_gpu->assign(b->i,b->i + B->rmap->n + 1); 3966ed502f03SStefano Zampini ierr = PetscLogCpuToGpu((B->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 3967ed502f03SStefano Zampini } 39682ed87e7eSStefano Zampini Broff = Bcusp->rowoffsets_gpu; 39692ed87e7eSStefano Zampini } else Broff = Bcsr->row_offsets; 3970ed502f03SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 39712ed87e7eSStefano Zampini stat = cusparseXcsr2coo(Acusp->handle, 39722ed87e7eSStefano Zampini Aroff->data().get(), 39732ed87e7eSStefano Zampini Annz, 39742ed87e7eSStefano Zampini m, 39752ed87e7eSStefano Zampini Acoo->data().get(), 39762ed87e7eSStefano Zampini CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 3977ed502f03SStefano Zampini stat = cusparseXcsr2coo(Bcusp->handle, 39782ed87e7eSStefano Zampini Broff->data().get(), 3979ed502f03SStefano Zampini Bnnz, 3980ed502f03SStefano Zampini m, 39812ed87e7eSStefano Zampini Bcoo->data().get(), 3982ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 39832ed87e7eSStefano Zampini /* Issues when using bool with large matrices on SUMMIT 10.2.89 */ 39842ed87e7eSStefano Zampini auto Aperm = thrust::make_constant_iterator(1); 39852ed87e7eSStefano Zampini auto Bperm = thrust::make_constant_iterator(0); 39868909a122SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(10,0,0) 3987ed502f03SStefano Zampini auto Bcib = thrust::make_transform_iterator(Bcsr->column_indices->begin(),Shift(A->cmap->n)); 3988ed502f03SStefano Zampini auto Bcie = thrust::make_transform_iterator(Bcsr->column_indices->end(),Shift(A->cmap->n)); 39898909a122SStefano Zampini #else 39908909a122SStefano Zampini /* there are issues instantiating the merge operation using a transform iterator for the columns of B */ 39918909a122SStefano Zampini auto Bcib = Bcsr->column_indices->begin(); 39928909a122SStefano Zampini auto Bcie = Bcsr->column_indices->end(); 39938909a122SStefano Zampini thrust::transform(Bcib,Bcie,Bcib,Shift(A->cmap->n)); 39948909a122SStefano Zampini #endif 39952ed87e7eSStefano Zampini auto wPerm = new THRUSTINTARRAY32(Annz+Bnnz); 39962ed87e7eSStefano Zampini auto Azb = thrust::make_zip_iterator(thrust::make_tuple(Acoo->begin(),Acsr->column_indices->begin(),Acsr->values->begin(),Aperm)); 39972ed87e7eSStefano Zampini auto Aze = thrust::make_zip_iterator(thrust::make_tuple(Acoo->end(),Acsr->column_indices->end(),Acsr->values->end(),Aperm)); 39982ed87e7eSStefano Zampini auto Bzb = thrust::make_zip_iterator(thrust::make_tuple(Bcoo->begin(),Bcib,Bcsr->values->begin(),Bperm)); 39992ed87e7eSStefano Zampini auto Bze = thrust::make_zip_iterator(thrust::make_tuple(Bcoo->end(),Bcie,Bcsr->values->end(),Bperm)); 40002ed87e7eSStefano Zampini auto Czb = thrust::make_zip_iterator(thrust::make_tuple(Ccoo->begin(),Ccsr->column_indices->begin(),Ccsr->values->begin(),wPerm->begin())); 4001ed502f03SStefano Zampini auto p1 = Ccusp->cooPerm->begin(); 4002ed502f03SStefano Zampini auto p2 = Ccusp->cooPerm->begin(); 4003ed502f03SStefano Zampini thrust::advance(p2,Annz); 40042ed87e7eSStefano Zampini PetscStackCallThrust(thrust::merge(thrust::device,Azb,Aze,Bzb,Bze,Czb,IJCompare4())); 40058909a122SStefano Zampini #if PETSC_PKG_CUDA_VERSION_LT(10,0,0) 40068909a122SStefano Zampini thrust::transform(Bcib,Bcie,Bcib,Shift(-A->cmap->n)); 40078909a122SStefano Zampini #endif 40082ed87e7eSStefano Zampini auto cci = thrust::make_counting_iterator(zero); 40092ed87e7eSStefano Zampini auto cce = thrust::make_counting_iterator(c->nz); 40102ed87e7eSStefano Zampini #if 0 //Errors on SUMMIT cuda 11.1.0 40112ed87e7eSStefano Zampini PetscStackCallThrust(thrust::partition_copy(thrust::device,cci,cce,wPerm->begin(),p1,p2,thrust::identity<int>())); 40122ed87e7eSStefano Zampini #else 40132ed87e7eSStefano Zampini auto pred = thrust::identity<int>(); 40142ed87e7eSStefano Zampini PetscStackCallThrust(thrust::copy_if(thrust::device,cci,cce,wPerm->begin(),p1,pred)); 40152ed87e7eSStefano Zampini PetscStackCallThrust(thrust::remove_copy_if(thrust::device,cci,cce,wPerm->begin(),p2,pred)); 40162ed87e7eSStefano Zampini #endif 4017ed502f03SStefano Zampini stat = cusparseXcoo2csr(Ccusp->handle, 40182ed87e7eSStefano Zampini Ccoo->data().get(), 4019ed502f03SStefano Zampini c->nz, 4020ed502f03SStefano Zampini m, 4021ed502f03SStefano Zampini Ccsr->row_offsets->data().get(), 4022ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 4023ed502f03SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 40242ed87e7eSStefano Zampini delete wPerm; 40252ed87e7eSStefano Zampini delete Acoo; 40262ed87e7eSStefano Zampini delete Bcoo; 40272ed87e7eSStefano Zampini delete Ccoo; 4028ed502f03SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 4029ed502f03SStefano Zampini stat = cusparseCreateCsr(&Cmat->matDescr, Ccsr->num_rows, Ccsr->num_cols, Ccsr->num_entries, 4030ed502f03SStefano Zampini Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get(), Ccsr->values->data().get(), 4031ed502f03SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 4032ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 4033ed502f03SStefano Zampini #endif 40341a2c6b5cSJunchao Zhang if (A->form_explicit_transpose && B->form_explicit_transpose) { /* if A and B have the transpose, generate C transpose too */ 4035ed502f03SStefano Zampini PetscBool AT = Acusp->matTranspose ? PETSC_TRUE : PETSC_FALSE, BT = Bcusp->matTranspose ? PETSC_TRUE : PETSC_FALSE; 4036ed502f03SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *CmatT = new Mat_SeqAIJCUSPARSEMultStruct; 4037ed502f03SStefano Zampini CsrMatrix *CcsrT = new CsrMatrix; 4038ed502f03SStefano Zampini CsrMatrix *AcsrT = AT ? (CsrMatrix*)Acusp->matTranspose->mat : NULL; 4039ed502f03SStefano Zampini CsrMatrix *BcsrT = BT ? (CsrMatrix*)Bcusp->matTranspose->mat : NULL; 4040ed502f03SStefano Zampini 40411a2c6b5cSJunchao Zhang (*C)->form_explicit_transpose = PETSC_TRUE; 40421a2c6b5cSJunchao Zhang (*C)->transupdated = PETSC_TRUE; 4043a49f1ed0SStefano Zampini Ccusp->rowoffsets_gpu = NULL; 4044ed502f03SStefano Zampini CmatT->cprowIndices = NULL; 4045ed502f03SStefano Zampini CmatT->mat = CcsrT; 4046ed502f03SStefano Zampini CcsrT->num_rows = n; 4047ed502f03SStefano Zampini CcsrT->num_cols = m; 4048ed502f03SStefano Zampini CcsrT->num_entries = c->nz; 4049ed502f03SStefano Zampini 4050ed502f03SStefano Zampini CcsrT->row_offsets = new THRUSTINTARRAY32(n+1); 4051ed502f03SStefano Zampini CcsrT->column_indices = new THRUSTINTARRAY32(c->nz); 4052ed502f03SStefano Zampini CcsrT->values = new THRUSTARRAY(c->nz); 4053ed502f03SStefano Zampini 4054ed502f03SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 4055ed502f03SStefano Zampini auto rT = CcsrT->row_offsets->begin(); 4056ed502f03SStefano Zampini if (AT) { 4057ed502f03SStefano Zampini rT = thrust::copy(AcsrT->row_offsets->begin(),AcsrT->row_offsets->end(),rT); 4058ed502f03SStefano Zampini thrust::advance(rT,-1); 4059ed502f03SStefano Zampini } 4060ed502f03SStefano Zampini if (BT) { 4061ed502f03SStefano Zampini auto titb = thrust::make_transform_iterator(BcsrT->row_offsets->begin(),Shift(a->nz)); 4062ed502f03SStefano Zampini auto tite = thrust::make_transform_iterator(BcsrT->row_offsets->end(),Shift(a->nz)); 4063ed502f03SStefano Zampini thrust::copy(titb,tite,rT); 4064ed502f03SStefano Zampini } 4065ed502f03SStefano Zampini auto cT = CcsrT->column_indices->begin(); 4066ed502f03SStefano Zampini if (AT) cT = thrust::copy(AcsrT->column_indices->begin(),AcsrT->column_indices->end(),cT); 4067ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->column_indices->begin(),BcsrT->column_indices->end(),cT); 4068ed502f03SStefano Zampini auto vT = CcsrT->values->begin(); 4069ed502f03SStefano Zampini if (AT) vT = thrust::copy(AcsrT->values->begin(),AcsrT->values->end(),vT); 4070ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->values->begin(),BcsrT->values->end(),vT); 4071ed502f03SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 4072ed502f03SStefano Zampini 4073ed502f03SStefano Zampini stat = cusparseCreateMatDescr(&CmatT->descr);CHKERRCUSPARSE(stat); 4074ed502f03SStefano Zampini stat = cusparseSetMatIndexBase(CmatT->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 4075ed502f03SStefano Zampini stat = cusparseSetMatType(CmatT->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 4076ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(CmatT->alpha_one),sizeof(PetscScalar));CHKERRCUDA(cerr); 4077ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(CmatT->beta_zero),sizeof(PetscScalar));CHKERRCUDA(cerr); 4078ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(CmatT->beta_one), sizeof(PetscScalar));CHKERRCUDA(cerr); 4079ed502f03SStefano Zampini cerr = cudaMemcpy(CmatT->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4080ed502f03SStefano Zampini cerr = cudaMemcpy(CmatT->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4081ed502f03SStefano Zampini cerr = cudaMemcpy(CmatT->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4082ed502f03SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 4083ed502f03SStefano Zampini stat = cusparseCreateCsr(&CmatT->matDescr, CcsrT->num_rows, CcsrT->num_cols, CcsrT->num_entries, 4084ed502f03SStefano Zampini CcsrT->row_offsets->data().get(), CcsrT->column_indices->data().get(), CcsrT->values->data().get(), 4085ed502f03SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 4086ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 4087ed502f03SStefano Zampini #endif 4088ed502f03SStefano Zampini Ccusp->matTranspose = CmatT; 4089ed502f03SStefano Zampini } 4090ed502f03SStefano Zampini } 4091ed502f03SStefano Zampini 4092ed502f03SStefano Zampini c->singlemalloc = PETSC_FALSE; 4093ed502f03SStefano Zampini c->free_a = PETSC_TRUE; 4094ed502f03SStefano Zampini c->free_ij = PETSC_TRUE; 4095ed502f03SStefano Zampini ierr = PetscMalloc1(m+1,&c->i);CHKERRQ(ierr); 4096ed502f03SStefano Zampini ierr = PetscMalloc1(c->nz,&c->j);CHKERRQ(ierr); 4097ed502f03SStefano Zampini if (PetscDefined(USE_64BIT_INDICES)) { /* 32 to 64 bit conversion on the GPU and then copy to host (lazy) */ 4098ed502f03SStefano Zampini THRUSTINTARRAY ii(Ccsr->row_offsets->size()); 4099ed502f03SStefano Zampini THRUSTINTARRAY jj(Ccsr->column_indices->size()); 4100ed502f03SStefano Zampini ii = *Ccsr->row_offsets; 4101ed502f03SStefano Zampini jj = *Ccsr->column_indices; 4102ed502f03SStefano Zampini cerr = cudaMemcpy(c->i,ii.data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4103ed502f03SStefano Zampini cerr = cudaMemcpy(c->j,jj.data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4104ed502f03SStefano Zampini } else { 4105ed502f03SStefano Zampini cerr = cudaMemcpy(c->i,Ccsr->row_offsets->data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4106ed502f03SStefano Zampini cerr = cudaMemcpy(c->j,Ccsr->column_indices->data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4107ed502f03SStefano Zampini } 4108ed502f03SStefano Zampini ierr = PetscLogGpuToCpu((Ccsr->column_indices->size() + Ccsr->row_offsets->size())*sizeof(PetscInt));CHKERRQ(ierr); 4109ed502f03SStefano Zampini ierr = PetscMalloc1(m,&c->ilen);CHKERRQ(ierr); 4110ed502f03SStefano Zampini ierr = PetscMalloc1(m,&c->imax);CHKERRQ(ierr); 4111ed502f03SStefano Zampini c->maxnz = c->nz; 4112ed502f03SStefano Zampini c->nonzerorowcnt = 0; 4113ed502f03SStefano Zampini c->rmax = 0; 4114ed502f03SStefano Zampini for (i = 0; i < m; i++) { 4115ed502f03SStefano Zampini const PetscInt nn = c->i[i+1] - c->i[i]; 4116ed502f03SStefano Zampini c->ilen[i] = c->imax[i] = nn; 4117ed502f03SStefano Zampini c->nonzerorowcnt += (PetscInt)!!nn; 4118ed502f03SStefano Zampini c->rmax = PetscMax(c->rmax,nn); 4119ed502f03SStefano Zampini } 4120ed502f03SStefano Zampini ierr = MatMarkDiagonal_SeqAIJ(*C);CHKERRQ(ierr); 4121ed502f03SStefano Zampini ierr = PetscMalloc1(c->nz,&c->a);CHKERRQ(ierr); 4122ed502f03SStefano Zampini (*C)->nonzerostate++; 4123ed502f03SStefano Zampini ierr = PetscLayoutSetUp((*C)->rmap);CHKERRQ(ierr); 4124ed502f03SStefano Zampini ierr = PetscLayoutSetUp((*C)->cmap);CHKERRQ(ierr); 4125ed502f03SStefano Zampini Ccusp->nonzerostate = (*C)->nonzerostate; 4126ed502f03SStefano Zampini (*C)->preallocated = PETSC_TRUE; 4127ed502f03SStefano Zampini } else { 4128ed502f03SStefano Zampini if ((*C)->rmap->n != B->rmap->n) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Invalid number or rows %D != %D",(*C)->rmap->n,B->rmap->n); 4129ed502f03SStefano Zampini c = (Mat_SeqAIJ*)(*C)->data; 4130ed502f03SStefano Zampini if (c->nz) { 4131ed502f03SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)(*C)->spptr; 4132ed502f03SStefano Zampini if (!Ccusp->cooPerm) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cooPerm"); 4133ed502f03SStefano Zampini if (Ccusp->format == MAT_CUSPARSE_ELL || Ccusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 4134ed502f03SStefano Zampini if (Ccusp->nonzerostate != (*C)->nonzerostate) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Wrong nonzerostate"); 4135ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 4136ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 4137ed502f03SStefano Zampini if (!Acusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 4138ed502f03SStefano Zampini if (!Bcusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 4139ed502f03SStefano Zampini Acsr = (CsrMatrix*)Acusp->mat->mat; 4140ed502f03SStefano Zampini Bcsr = (CsrMatrix*)Bcusp->mat->mat; 4141ed502f03SStefano Zampini Ccsr = (CsrMatrix*)Ccusp->mat->mat; 4142ed502f03SStefano Zampini if (Acsr->num_entries != (PetscInt)Acsr->values->size()) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_COR,"A nnz %D != %D",Acsr->num_entries,(PetscInt)Acsr->values->size()); 4143ed502f03SStefano Zampini if (Bcsr->num_entries != (PetscInt)Bcsr->values->size()) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_COR,"B nnz %D != %D",Bcsr->num_entries,(PetscInt)Bcsr->values->size()); 4144ed502f03SStefano Zampini if (Ccsr->num_entries != (PetscInt)Ccsr->values->size()) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_COR,"C nnz %D != %D",Ccsr->num_entries,(PetscInt)Ccsr->values->size()); 4145ed502f03SStefano Zampini if (Ccsr->num_entries != Acsr->num_entries + Bcsr->num_entries) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_COR,"C nnz %D != %D + %D",Ccsr->num_entries,Acsr->num_entries,Bcsr->num_entries); 4146ed502f03SStefano Zampini if (Ccusp->cooPerm->size() != Ccsr->values->size()) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_COR,"permSize %D != %D",(PetscInt)Ccusp->cooPerm->size(),(PetscInt)Ccsr->values->size()); 4147ed502f03SStefano Zampini auto pmid = Ccusp->cooPerm->begin(); 4148ed502f03SStefano Zampini thrust::advance(pmid,Acsr->num_entries); 4149ed502f03SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 4150ed502f03SStefano Zampini auto zibait = thrust::make_zip_iterator(thrust::make_tuple(Acsr->values->begin(), 4151ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),Ccusp->cooPerm->begin()))); 4152ed502f03SStefano Zampini auto zieait = thrust::make_zip_iterator(thrust::make_tuple(Acsr->values->end(), 4153ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),pmid))); 4154ed502f03SStefano Zampini thrust::for_each(zibait,zieait,VecCUDAEquals()); 4155ed502f03SStefano Zampini auto zibbit = thrust::make_zip_iterator(thrust::make_tuple(Bcsr->values->begin(), 4156ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),pmid))); 4157ed502f03SStefano Zampini auto ziebit = thrust::make_zip_iterator(thrust::make_tuple(Bcsr->values->end(), 4158ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),Ccusp->cooPerm->end()))); 4159ed502f03SStefano Zampini thrust::for_each(zibbit,ziebit,VecCUDAEquals()); 4160a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(*C,PETSC_FALSE);CHKERRQ(ierr); 41611a2c6b5cSJunchao Zhang if (A->form_explicit_transpose && B->form_explicit_transpose && (*C)->form_explicit_transpose) { 4162ed502f03SStefano Zampini if (!Ccusp->matTranspose) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing transpose Mat_SeqAIJCUSPARSEMultStruct"); 4163ed502f03SStefano Zampini PetscBool AT = Acusp->matTranspose ? PETSC_TRUE : PETSC_FALSE, BT = Bcusp->matTranspose ? PETSC_TRUE : PETSC_FALSE; 4164ed502f03SStefano Zampini CsrMatrix *AcsrT = AT ? (CsrMatrix*)Acusp->matTranspose->mat : NULL; 4165ed502f03SStefano Zampini CsrMatrix *BcsrT = BT ? (CsrMatrix*)Bcusp->matTranspose->mat : NULL; 4166ed502f03SStefano Zampini CsrMatrix *CcsrT = (CsrMatrix*)Ccusp->matTranspose->mat; 4167ed502f03SStefano Zampini auto vT = CcsrT->values->begin(); 4168ed502f03SStefano Zampini if (AT) vT = thrust::copy(AcsrT->values->begin(),AcsrT->values->end(),vT); 4169ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->values->begin(),BcsrT->values->end(),vT); 41701a2c6b5cSJunchao Zhang (*C)->transupdated = PETSC_TRUE; 4171ed502f03SStefano Zampini } 4172ed502f03SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 4173ed502f03SStefano Zampini } 4174ed502f03SStefano Zampini } 4175ed502f03SStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)*C);CHKERRQ(ierr); 4176ed502f03SStefano Zampini (*C)->assembled = PETSC_TRUE; 4177ed502f03SStefano Zampini (*C)->was_assembled = PETSC_FALSE; 4178ed502f03SStefano Zampini (*C)->offloadmask = PETSC_OFFLOAD_GPU; 4179ed502f03SStefano Zampini PetscFunctionReturn(0); 4180ed502f03SStefano Zampini } 4181c215019aSStefano Zampini 4182c215019aSStefano Zampini static PetscErrorCode MatSeqAIJCopySubArray_SeqAIJCUSPARSE(Mat A, PetscInt n, const PetscInt idx[], PetscScalar v[]) 4183c215019aSStefano Zampini { 4184c215019aSStefano Zampini PetscErrorCode ierr; 4185c215019aSStefano Zampini bool dmem; 4186c215019aSStefano Zampini const PetscScalar *av; 4187c215019aSStefano Zampini cudaError_t cerr; 4188c215019aSStefano Zampini 4189c215019aSStefano Zampini PetscFunctionBegin; 4190c215019aSStefano Zampini dmem = isCudaMem(v); 4191c215019aSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArrayRead(A,&av);CHKERRQ(ierr); 4192c215019aSStefano Zampini if (n && idx) { 4193c215019aSStefano Zampini THRUSTINTARRAY widx(n); 4194c215019aSStefano Zampini widx.assign(idx,idx+n); 4195c215019aSStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscInt));CHKERRQ(ierr); 4196c215019aSStefano Zampini 4197c215019aSStefano Zampini THRUSTARRAY *w = NULL; 4198c215019aSStefano Zampini thrust::device_ptr<PetscScalar> dv; 4199c215019aSStefano Zampini if (dmem) { 4200c215019aSStefano Zampini dv = thrust::device_pointer_cast(v); 4201c215019aSStefano Zampini } else { 4202c215019aSStefano Zampini w = new THRUSTARRAY(n); 4203c215019aSStefano Zampini dv = w->data(); 4204c215019aSStefano Zampini } 4205c215019aSStefano Zampini thrust::device_ptr<const PetscScalar> dav = thrust::device_pointer_cast(av); 4206c215019aSStefano Zampini 4207c215019aSStefano Zampini auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(dav,widx.begin()),dv)); 4208c215019aSStefano Zampini auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(dav,widx.end()),dv+n)); 4209c215019aSStefano Zampini thrust::for_each(zibit,zieit,VecCUDAEquals()); 4210c215019aSStefano Zampini if (w) { 4211c215019aSStefano Zampini cerr = cudaMemcpy(v,w->data().get(),n*sizeof(PetscScalar),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4212c215019aSStefano Zampini } 4213c215019aSStefano Zampini delete w; 4214c215019aSStefano Zampini } else { 4215c215019aSStefano Zampini cerr = cudaMemcpy(v,av,n*sizeof(PetscScalar),dmem ? cudaMemcpyDeviceToDevice : cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4216c215019aSStefano Zampini } 4217c215019aSStefano Zampini if (!dmem) { ierr = PetscLogCpuToGpu(n*sizeof(PetscScalar));CHKERRQ(ierr); } 4218c215019aSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArrayRead(A,&av);CHKERRQ(ierr); 4219c215019aSStefano Zampini PetscFunctionReturn(0); 4220c215019aSStefano Zampini } 4221