19ae82921SPaul Mullowney /* 29ae82921SPaul Mullowney Defines the basic matrix operations for the AIJ (compressed row) 3fd7c363cSSatish Balay matrix storage format using the CUSPARSE library, 49ae82921SPaul Mullowney */ 5dced61a5SBarry Smith #define PETSC_SKIP_SPINLOCK 699acd6aaSStefano Zampini #define PETSC_SKIP_IMMINTRIN_H_CUDAWORKAROUND 1 79ae82921SPaul Mullowney 83d13b8fdSMatthew G. Knepley #include <petscconf.h> 93d13b8fdSMatthew G. Knepley #include <../src/mat/impls/aij/seq/aij.h> /*I "petscmat.h" I*/ 10087f3262SPaul Mullowney #include <../src/mat/impls/sbaij/seq/sbaij.h> 113d13b8fdSMatthew G. Knepley #include <../src/vec/vec/impls/dvecimpl.h> 12af0996ceSBarry Smith #include <petsc/private/vecimpl.h> 139ae82921SPaul Mullowney #undef VecType 143d13b8fdSMatthew G. Knepley #include <../src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h> 15a2cee5feSJed Brown #include <thrust/adjacent_difference.h> 16a0e72f99SJunchao Zhang #include <thrust/async/for_each.h> 17a2cee5feSJed Brown #include <thrust/iterator/constant_iterator.h> 18a2cee5feSJed Brown #include <thrust/remove.h> 19a2cee5feSJed Brown #include <thrust/sort.h> 20a2cee5feSJed Brown #include <thrust/unique.h> 21e8d2b73aSMark Adams 22e057df02SPaul Mullowney const char *const MatCUSPARSEStorageFormats[] = {"CSR","ELL","HYB","MatCUSPARSEStorageFormat","MAT_CUSPARSE_",0}; 23afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 24afb2bd1cSJunchao Zhang /* The following are copied from cusparse.h in CUDA-11.0. In MatCUSPARSESpMVAlgorithms[] etc, we copy them in 25afb2bd1cSJunchao Zhang 0-based integer value order, since we want to use PetscOptionsEnum() to parse user command line options for them. 26afb2bd1cSJunchao Zhang 27afb2bd1cSJunchao Zhang typedef enum { 28afb2bd1cSJunchao Zhang CUSPARSE_MV_ALG_DEFAULT = 0, 29afb2bd1cSJunchao Zhang CUSPARSE_COOMV_ALG = 1, 30afb2bd1cSJunchao Zhang CUSPARSE_CSRMV_ALG1 = 2, 31afb2bd1cSJunchao Zhang CUSPARSE_CSRMV_ALG2 = 3 32afb2bd1cSJunchao Zhang } cusparseSpMVAlg_t; 33afb2bd1cSJunchao Zhang 34afb2bd1cSJunchao Zhang typedef enum { 35afb2bd1cSJunchao Zhang CUSPARSE_MM_ALG_DEFAULT CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_ALG_DEFAULT) = 0, 36afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG1 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG1) = 1, 37afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG2 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG2) = 2, 38afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG3 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG3) = 3, 39afb2bd1cSJunchao Zhang CUSPARSE_CSRMM_ALG1 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_CSR_ALG1) = 4, 40afb2bd1cSJunchao Zhang CUSPARSE_SPMM_ALG_DEFAULT = 0, 41afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG1 = 1, 42afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG2 = 2, 43afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG3 = 3, 44afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG4 = 5, 45afb2bd1cSJunchao Zhang CUSPARSE_SPMM_CSR_ALG1 = 4, 46afb2bd1cSJunchao Zhang CUSPARSE_SPMM_CSR_ALG2 = 6, 47afb2bd1cSJunchao Zhang } cusparseSpMMAlg_t; 48afb2bd1cSJunchao Zhang 49afb2bd1cSJunchao Zhang typedef enum { 50afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG1 = 1, // faster than V2 (in general), deterministc 51afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG2 = 2 // low memory requirement, non-deterministc 52afb2bd1cSJunchao Zhang } cusparseCsr2CscAlg_t; 53afb2bd1cSJunchao Zhang */ 54afb2bd1cSJunchao Zhang const char *const MatCUSPARSESpMVAlgorithms[] = {"MV_ALG_DEFAULT","COOMV_ALG", "CSRMV_ALG1","CSRMV_ALG2", "cusparseSpMVAlg_t","CUSPARSE_",0}; 55afb2bd1cSJunchao Zhang const char *const MatCUSPARSESpMMAlgorithms[] = {"ALG_DEFAULT","COO_ALG1","COO_ALG2","COO_ALG3","CSR_ALG1","COO_ALG4","CSR_ALG2","cusparseSpMMAlg_t","CUSPARSE_SPMM_",0}; 56afb2bd1cSJunchao Zhang const char *const MatCUSPARSECsr2CscAlgorithms[] = {"INVALID"/*cusparse does not have enum 0! We created one*/,"ALG1","ALG2","cusparseCsr2CscAlg_t","CUSPARSE_CSR2CSC_",0}; 57afb2bd1cSJunchao Zhang #endif 589ae82921SPaul Mullowney 59087f3262SPaul Mullowney static PetscErrorCode MatICCFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,const MatFactorInfo*); 60087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,const MatFactorInfo*); 61087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorNumeric_SeqAIJCUSPARSE(Mat,Mat,const MatFactorInfo*); 62087f3262SPaul Mullowney 636fa9248bSJed Brown static PetscErrorCode MatILUFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,IS,const MatFactorInfo*); 646fa9248bSJed Brown static PetscErrorCode MatLUFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,IS,const MatFactorInfo*); 656fa9248bSJed Brown static PetscErrorCode MatLUFactorNumeric_SeqAIJCUSPARSE(Mat,Mat,const MatFactorInfo*); 66087f3262SPaul Mullowney 676fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE(Mat,Vec,Vec); 686fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE_NaturalOrdering(Mat,Vec,Vec); 696fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE(Mat,Vec,Vec); 706fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering(Mat,Vec,Vec); 714416b707SBarry Smith static PetscErrorCode MatSetFromOptions_SeqAIJCUSPARSE(PetscOptionItems *PetscOptionsObject,Mat); 72a587d139SMark static PetscErrorCode MatAXPY_SeqAIJCUSPARSE(Mat,PetscScalar,Mat,MatStructure); 7333c9ba73SStefano Zampini static PetscErrorCode MatScale_SeqAIJCUSPARSE(Mat,PetscScalar); 746fa9248bSJed Brown static PetscErrorCode MatMult_SeqAIJCUSPARSE(Mat,Vec,Vec); 756fa9248bSJed Brown static PetscErrorCode MatMultAdd_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec); 766fa9248bSJed Brown static PetscErrorCode MatMultTranspose_SeqAIJCUSPARSE(Mat,Vec,Vec); 776fa9248bSJed Brown static PetscErrorCode MatMultTransposeAdd_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec); 78e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTranspose_SeqAIJCUSPARSE(Mat,Vec,Vec); 79e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTransposeAdd_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec); 80e6e9a74fSStefano Zampini static PetscErrorCode MatMultAddKernel_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec,PetscBool,PetscBool); 819ae82921SPaul Mullowney 827f756511SDominic Meiser static PetscErrorCode CsrMatrix_Destroy(CsrMatrix**); 83470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSETriFactorStruct**); 84470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSEMultStruct**,MatCUSPARSEStorageFormat); 85470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSETriFactors_Destroy(Mat_SeqAIJCUSPARSETriFactors**); 86470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSE_Destroy(Mat_SeqAIJCUSPARSE**); 877f756511SDominic Meiser 8857181aedSStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSECopyFromGPU(Mat); 89a49f1ed0SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSEInvalidateTranspose(Mat,PetscBool); 9057181aedSStefano Zampini 91c215019aSStefano Zampini static PetscErrorCode MatSeqAIJCopySubArray_SeqAIJCUSPARSE(Mat,PetscInt,const PetscInt[],PetscScalar[]); 92219fbbafSJunchao Zhang static PetscErrorCode MatSetPreallocationCOO_SeqAIJCUSPARSE(Mat,PetscCount,const PetscInt[],const PetscInt[]); 93219fbbafSJunchao Zhang static PetscErrorCode MatSetValuesCOO_SeqAIJCUSPARSE(Mat,const PetscScalar[],InsertMode); 94c215019aSStefano Zampini 95bc3f50f2SPaul Mullowney PETSC_INTERN PetscErrorCode MatCUSPARSESetFormat_SeqAIJCUSPARSE(Mat A,MatCUSPARSEFormatOperation op,MatCUSPARSEStorageFormat format) 96ca45077fSPaul Mullowney { 97aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 986e111a19SKarl Rupp 99ca45077fSPaul Mullowney PetscFunctionBegin; 100ca45077fSPaul Mullowney switch (op) { 101e057df02SPaul Mullowney case MAT_CUSPARSE_MULT: 102aa372e3fSPaul Mullowney cusparsestruct->format = format; 103ca45077fSPaul Mullowney break; 104e057df02SPaul Mullowney case MAT_CUSPARSE_ALL: 105aa372e3fSPaul Mullowney cusparsestruct->format = format; 106ca45077fSPaul Mullowney break; 107ca45077fSPaul Mullowney default: 10898921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"unsupported operation %d for MatCUSPARSEFormatOperation. MAT_CUSPARSE_MULT and MAT_CUSPARSE_ALL are currently supported.",op); 109ca45077fSPaul Mullowney } 110ca45077fSPaul Mullowney PetscFunctionReturn(0); 111ca45077fSPaul Mullowney } 1129ae82921SPaul Mullowney 113e057df02SPaul Mullowney /*@ 114e057df02SPaul Mullowney MatCUSPARSESetFormat - Sets the storage format of CUSPARSE matrices for a particular 115e057df02SPaul Mullowney operation. Only the MatMult operation can use different GPU storage formats 116aa372e3fSPaul Mullowney for MPIAIJCUSPARSE matrices. 117e057df02SPaul Mullowney Not Collective 118e057df02SPaul Mullowney 119e057df02SPaul Mullowney Input Parameters: 1208468deeeSKarl Rupp + A - Matrix of type SEQAIJCUSPARSE 12136d62e41SPaul Mullowney . op - MatCUSPARSEFormatOperation. SEQAIJCUSPARSE matrices support MAT_CUSPARSE_MULT and MAT_CUSPARSE_ALL. MPIAIJCUSPARSE matrices support MAT_CUSPARSE_MULT_DIAG, MAT_CUSPARSE_MULT_OFFDIAG, and MAT_CUSPARSE_ALL. 1222692e278SPaul Mullowney - format - MatCUSPARSEStorageFormat (one of MAT_CUSPARSE_CSR, MAT_CUSPARSE_ELL, MAT_CUSPARSE_HYB. The latter two require CUDA 4.2) 123e057df02SPaul Mullowney 124e057df02SPaul Mullowney Output Parameter: 125e057df02SPaul Mullowney 126e057df02SPaul Mullowney Level: intermediate 127e057df02SPaul Mullowney 128db781477SPatrick Sanan .seealso: `MatCUSPARSEStorageFormat`, `MatCUSPARSEFormatOperation` 129e057df02SPaul Mullowney @*/ 130e057df02SPaul Mullowney PetscErrorCode MatCUSPARSESetFormat(Mat A,MatCUSPARSEFormatOperation op,MatCUSPARSEStorageFormat format) 131e057df02SPaul Mullowney { 132e057df02SPaul Mullowney PetscFunctionBegin; 133e057df02SPaul Mullowney PetscValidHeaderSpecific(A, MAT_CLASSID,1); 134cac4c232SBarry Smith PetscTryMethod(A,"MatCUSPARSESetFormat_C",(Mat,MatCUSPARSEFormatOperation,MatCUSPARSEStorageFormat),(A,op,format)); 135e057df02SPaul Mullowney PetscFunctionReturn(0); 136e057df02SPaul Mullowney } 137e057df02SPaul Mullowney 138365b711fSMark Adams PETSC_INTERN PetscErrorCode MatCUSPARSESetUseCPUSolve_SeqAIJCUSPARSE(Mat A,PetscBool use_cpu) 139365b711fSMark Adams { 140365b711fSMark Adams Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 141365b711fSMark Adams 142365b711fSMark Adams PetscFunctionBegin; 143365b711fSMark Adams cusparsestruct->use_cpu_solve = use_cpu; 144365b711fSMark Adams PetscFunctionReturn(0); 145365b711fSMark Adams } 146365b711fSMark Adams 147365b711fSMark Adams /*@ 148365b711fSMark Adams MatCUSPARSESetUseCPUSolve - Sets use CPU MatSolve. 149365b711fSMark Adams 150365b711fSMark Adams Input Parameters: 151365b711fSMark Adams + A - Matrix of type SEQAIJCUSPARSE 152365b711fSMark Adams - use_cpu - set flag for using the built-in CPU MatSolve 153365b711fSMark Adams 154365b711fSMark Adams Output Parameter: 155365b711fSMark Adams 156365b711fSMark Adams Notes: 157365b711fSMark Adams The cuSparse LU solver currently computes the factors with the built-in CPU method 158365b711fSMark Adams and moves the factors to the GPU for the solve. We have observed better performance keeping the data on the CPU and computing the solve there. 159365b711fSMark Adams This method to specify if the solve is done on the CPU or GPU (GPU is the default). 160365b711fSMark Adams 161365b711fSMark Adams Level: intermediate 162365b711fSMark Adams 163db781477SPatrick Sanan .seealso: `MatCUSPARSEStorageFormat`, `MatCUSPARSEFormatOperation` 164365b711fSMark Adams @*/ 165365b711fSMark Adams PetscErrorCode MatCUSPARSESetUseCPUSolve(Mat A,PetscBool use_cpu) 166365b711fSMark Adams { 167365b711fSMark Adams PetscFunctionBegin; 168365b711fSMark Adams PetscValidHeaderSpecific(A, MAT_CLASSID,1); 169cac4c232SBarry Smith PetscTryMethod(A,"MatCUSPARSESetUseCPUSolve_C",(Mat,PetscBool),(A,use_cpu)); 170365b711fSMark Adams PetscFunctionReturn(0); 171365b711fSMark Adams } 172365b711fSMark Adams 1731a2c6b5cSJunchao Zhang PetscErrorCode MatSetOption_SeqAIJCUSPARSE(Mat A,MatOption op,PetscBool flg) 174e6e9a74fSStefano Zampini { 175e6e9a74fSStefano Zampini PetscFunctionBegin; 1761a2c6b5cSJunchao Zhang switch (op) { 1771a2c6b5cSJunchao Zhang case MAT_FORM_EXPLICIT_TRANSPOSE: 1781a2c6b5cSJunchao Zhang /* need to destroy the transpose matrix if present to prevent from logic errors if flg is set to true later */ 1799566063dSJacob Faibussowitsch if (A->form_explicit_transpose && !flg) PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE)); 1801a2c6b5cSJunchao Zhang A->form_explicit_transpose = flg; 1811a2c6b5cSJunchao Zhang break; 1821a2c6b5cSJunchao Zhang default: 1839566063dSJacob Faibussowitsch PetscCall(MatSetOption_SeqAIJ(A,op,flg)); 1841a2c6b5cSJunchao Zhang break; 185e6e9a74fSStefano Zampini } 186e6e9a74fSStefano Zampini PetscFunctionReturn(0); 187e6e9a74fSStefano Zampini } 188e6e9a74fSStefano Zampini 189bddcd29dSMark Adams static PetscErrorCode MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(Mat A); 190bddcd29dSMark Adams 191bddcd29dSMark Adams static PetscErrorCode MatLUFactorNumeric_SeqAIJCUSPARSE(Mat B,Mat A,const MatFactorInfo *info) 192bddcd29dSMark Adams { 193bddcd29dSMark Adams Mat_SeqAIJ *b = (Mat_SeqAIJ*)B->data; 194bddcd29dSMark Adams IS isrow = b->row,iscol = b->col; 195bddcd29dSMark Adams PetscBool row_identity,col_identity; 196365b711fSMark Adams Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)B->spptr; 197bddcd29dSMark Adams 198bddcd29dSMark Adams PetscFunctionBegin; 1999566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyFromGPU(A)); 2009566063dSJacob Faibussowitsch PetscCall(MatLUFactorNumeric_SeqAIJ(B,A,info)); 201bddcd29dSMark Adams B->offloadmask = PETSC_OFFLOAD_CPU; 202bddcd29dSMark Adams /* determine which version of MatSolve needs to be used. */ 2039566063dSJacob Faibussowitsch PetscCall(ISIdentity(isrow,&row_identity)); 2049566063dSJacob Faibussowitsch PetscCall(ISIdentity(iscol,&col_identity)); 205f93f8571SJunchao Zhang 206365b711fSMark Adams if (!cusparsestruct->use_cpu_solve) { 207f93f8571SJunchao Zhang if (row_identity && col_identity) { 208bddcd29dSMark Adams B->ops->solve = MatSolve_SeqAIJCUSPARSE_NaturalOrdering; 209bddcd29dSMark Adams B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering; 210bddcd29dSMark Adams } else { 211bddcd29dSMark Adams B->ops->solve = MatSolve_SeqAIJCUSPARSE; 212bddcd29dSMark Adams B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE; 213365b711fSMark Adams } 214f93f8571SJunchao Zhang } 215bddcd29dSMark Adams B->ops->matsolve = NULL; 216bddcd29dSMark Adams B->ops->matsolvetranspose = NULL; 217bddcd29dSMark Adams 218bddcd29dSMark Adams /* get the triangular factors */ 219365b711fSMark Adams if (!cusparsestruct->use_cpu_solve) { 2209566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(B)); 221365b711fSMark Adams } 222bddcd29dSMark Adams PetscFunctionReturn(0); 223bddcd29dSMark Adams } 224bddcd29dSMark Adams 2254416b707SBarry Smith static PetscErrorCode MatSetFromOptions_SeqAIJCUSPARSE(PetscOptionItems *PetscOptionsObject,Mat A) 2269ae82921SPaul Mullowney { 227e057df02SPaul Mullowney MatCUSPARSEStorageFormat format; 2289ae82921SPaul Mullowney PetscBool flg; 229a183c035SDominic Meiser Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 2306e111a19SKarl Rupp 2319ae82921SPaul Mullowney PetscFunctionBegin; 232d0609cedSBarry Smith PetscOptionsHeadBegin(PetscOptionsObject,"SeqAIJCUSPARSE options"); 2339ae82921SPaul Mullowney if (A->factortype == MAT_FACTOR_NONE) { 234d0609cedSBarry Smith PetscCall(PetscOptionsEnum("-mat_cusparse_mult_storage_format","sets storage format of (seq)aijcusparse gpu matrices for SpMV", 235d0609cedSBarry Smith "MatCUSPARSESetFormat",MatCUSPARSEStorageFormats,(PetscEnum)cusparsestruct->format,(PetscEnum*)&format,&flg)); 2369566063dSJacob Faibussowitsch if (flg) PetscCall(MatCUSPARSESetFormat(A,MAT_CUSPARSE_MULT,format)); 237afb2bd1cSJunchao Zhang 238d0609cedSBarry Smith PetscCall(PetscOptionsEnum("-mat_cusparse_storage_format","sets storage format of (seq)aijcusparse gpu matrices for SpMV and TriSolve", 239d0609cedSBarry Smith "MatCUSPARSESetFormat",MatCUSPARSEStorageFormats,(PetscEnum)cusparsestruct->format,(PetscEnum*)&format,&flg)); 2409566063dSJacob Faibussowitsch if (flg) PetscCall(MatCUSPARSESetFormat(A,MAT_CUSPARSE_ALL,format)); 2419566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mat_cusparse_use_cpu_solve","Use CPU (I)LU solve","MatCUSPARSESetUseCPUSolve",cusparsestruct->use_cpu_solve,&cusparsestruct->use_cpu_solve,&flg)); 2429566063dSJacob Faibussowitsch if (flg) PetscCall(MatCUSPARSESetUseCPUSolve(A,cusparsestruct->use_cpu_solve)); 243afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 244d0609cedSBarry Smith PetscCall(PetscOptionsEnum("-mat_cusparse_spmv_alg","sets cuSPARSE algorithm used in sparse-mat dense-vector multiplication (SpMV)", 245d0609cedSBarry Smith "cusparseSpMVAlg_t",MatCUSPARSESpMVAlgorithms,(PetscEnum)cusparsestruct->spmvAlg,(PetscEnum*)&cusparsestruct->spmvAlg,&flg)); 246afb2bd1cSJunchao Zhang /* If user did use this option, check its consistency with cuSPARSE, since PetscOptionsEnum() sets enum values based on their position in MatCUSPARSESpMVAlgorithms[] */ 247ba986b86SSatish Balay #if CUSPARSE_VERSION > 11301 248aed4548fSBarry Smith PetscCheck(!flg || CUSPARSE_SPMV_CSR_ALG1 == 2,PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseSpMVAlg_t has been changed but PETSc has not been updated accordingly"); 249a435da06SStefano Zampini #else 250aed4548fSBarry Smith PetscCheck(!flg || CUSPARSE_CSRMV_ALG1 == 2,PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseSpMVAlg_t has been changed but PETSc has not been updated accordingly"); 251a435da06SStefano Zampini #endif 252d0609cedSBarry Smith PetscCall(PetscOptionsEnum("-mat_cusparse_spmm_alg","sets cuSPARSE algorithm used in sparse-mat dense-mat multiplication (SpMM)", 253d0609cedSBarry Smith "cusparseSpMMAlg_t",MatCUSPARSESpMMAlgorithms,(PetscEnum)cusparsestruct->spmmAlg,(PetscEnum*)&cusparsestruct->spmmAlg,&flg)); 254aed4548fSBarry Smith PetscCheck(!flg || CUSPARSE_SPMM_CSR_ALG1 == 4,PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseSpMMAlg_t has been changed but PETSc has not been updated accordingly"); 255afb2bd1cSJunchao Zhang 256d0609cedSBarry Smith PetscCall(PetscOptionsEnum("-mat_cusparse_csr2csc_alg","sets cuSPARSE algorithm used in converting CSR matrices to CSC matrices", 257d0609cedSBarry Smith "cusparseCsr2CscAlg_t",MatCUSPARSECsr2CscAlgorithms,(PetscEnum)cusparsestruct->csr2cscAlg,(PetscEnum*)&cusparsestruct->csr2cscAlg,&flg)); 258aed4548fSBarry Smith PetscCheck(!flg || CUSPARSE_CSR2CSC_ALG1 == 1,PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseCsr2CscAlg_t has been changed but PETSc has not been updated accordingly"); 259afb2bd1cSJunchao Zhang #endif 2604c87dfd4SPaul Mullowney } 261d0609cedSBarry Smith PetscOptionsHeadEnd(); 2629ae82921SPaul Mullowney PetscFunctionReturn(0); 2639ae82921SPaul Mullowney } 2649ae82921SPaul Mullowney 265087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEBuildILULowerTriMatrix(Mat A) 2669ae82921SPaul Mullowney { 2679ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 2689ae82921SPaul Mullowney PetscInt n = A->rmap->n; 2699ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 270aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 2719ae82921SPaul Mullowney const PetscInt *ai = a->i,*aj = a->j,*vi; 2729ae82921SPaul Mullowney const MatScalar *aa = a->a,*v; 2739ae82921SPaul Mullowney PetscInt *AiLo, *AjLo; 2749ae82921SPaul Mullowney PetscInt i,nz, nzLower, offset, rowOffset; 2759ae82921SPaul Mullowney 2769ae82921SPaul Mullowney PetscFunctionBegin; 277cf00fe3bSKarl Rupp if (!n) PetscFunctionReturn(0); 278c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 2799ae82921SPaul Mullowney try { 2809ae82921SPaul Mullowney /* first figure out the number of nonzeros in the lower triangular matrix including 1's on the diagonal. */ 2819ae82921SPaul Mullowney nzLower=n+ai[n]-ai[1]; 282da79fbbcSStefano Zampini if (!loTriFactor) { 2832cbc15d9SMark PetscScalar *AALo; 2842cbc15d9SMark 2859566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void**) &AALo, nzLower*sizeof(PetscScalar))); 2869ae82921SPaul Mullowney 2879ae82921SPaul Mullowney /* Allocate Space for the lower triangular matrix */ 2889566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void**) &AiLo, (n+1)*sizeof(PetscInt))); 2899566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void**) &AjLo, nzLower*sizeof(PetscInt))); 2909ae82921SPaul Mullowney 2919ae82921SPaul Mullowney /* Fill the lower triangular matrix */ 2929ae82921SPaul Mullowney AiLo[0] = (PetscInt) 0; 2939ae82921SPaul Mullowney AiLo[n] = nzLower; 2949ae82921SPaul Mullowney AjLo[0] = (PetscInt) 0; 2959ae82921SPaul Mullowney AALo[0] = (MatScalar) 1.0; 2969ae82921SPaul Mullowney v = aa; 2979ae82921SPaul Mullowney vi = aj; 2989ae82921SPaul Mullowney offset = 1; 2999ae82921SPaul Mullowney rowOffset= 1; 3009ae82921SPaul Mullowney for (i=1; i<n; i++) { 3019ae82921SPaul Mullowney nz = ai[i+1] - ai[i]; 302e057df02SPaul Mullowney /* additional 1 for the term on the diagonal */ 3039ae82921SPaul Mullowney AiLo[i] = rowOffset; 3049ae82921SPaul Mullowney rowOffset += nz+1; 3059ae82921SPaul Mullowney 3069566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&(AjLo[offset]), vi, nz)); 3079566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&(AALo[offset]), v, nz)); 3089ae82921SPaul Mullowney 3099ae82921SPaul Mullowney offset += nz; 3109ae82921SPaul Mullowney AjLo[offset] = (PetscInt) i; 3119ae82921SPaul Mullowney AALo[offset] = (MatScalar) 1.0; 3129ae82921SPaul Mullowney offset += 1; 3139ae82921SPaul Mullowney 3149ae82921SPaul Mullowney v += nz; 3159ae82921SPaul Mullowney vi += nz; 3169ae82921SPaul Mullowney } 3172205254eSKarl Rupp 318aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 3199566063dSJacob Faibussowitsch PetscCall(PetscNew(&loTriFactor)); 320da79fbbcSStefano Zampini loTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 321aa372e3fSPaul Mullowney /* Create the matrix description */ 3229566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&loTriFactor->descr)); 3239566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(loTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO)); 3241b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 3259566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL)); 326afb2bd1cSJunchao Zhang #else 3279566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR)); 328afb2bd1cSJunchao Zhang #endif 3299566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatFillMode(loTriFactor->descr, CUSPARSE_FILL_MODE_LOWER)); 3309566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatDiagType(loTriFactor->descr, CUSPARSE_DIAG_TYPE_UNIT)); 331aa372e3fSPaul Mullowney 332aa372e3fSPaul Mullowney /* set the operation */ 333aa372e3fSPaul Mullowney loTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 334aa372e3fSPaul Mullowney 335aa372e3fSPaul Mullowney /* set the matrix */ 336aa372e3fSPaul Mullowney loTriFactor->csrMat = new CsrMatrix; 337aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows = n; 338aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols = n; 339aa372e3fSPaul Mullowney loTriFactor->csrMat->num_entries = nzLower; 340aa372e3fSPaul Mullowney 341aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(n+1); 342aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->assign(AiLo, AiLo+n+1); 343aa372e3fSPaul Mullowney 344aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(nzLower); 345aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->assign(AjLo, AjLo+nzLower); 346aa372e3fSPaul Mullowney 347aa372e3fSPaul Mullowney loTriFactor->csrMat->values = new THRUSTARRAY(nzLower); 348aa372e3fSPaul Mullowney loTriFactor->csrMat->values->assign(AALo, AALo+nzLower); 349aa372e3fSPaul Mullowney 350afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 3519566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0)); 352261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseCreateCsrsvInfo(&loTriFactor->solveInfo)); 3531b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 354261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseXcsrsv_buffsize(cusparseTriFactors->handle, loTriFactor->solveOp, 355afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 356afb2bd1cSJunchao Zhang loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 357afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo, 3585f80ce2aSJacob Faibussowitsch &loTriFactor->solveBufferSize)); 3599566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&loTriFactor->solveBuffer,loTriFactor->solveBufferSize)); 360afb2bd1cSJunchao Zhang #endif 361afb2bd1cSJunchao Zhang 362aa372e3fSPaul Mullowney /* perform the solve analysis */ 363261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseXcsrsv_analysis(cusparseTriFactors->handle, loTriFactor->solveOp, 364aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 365aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 366d49cd2b7SBarry Smith loTriFactor->csrMat->column_indices->data().get(), 3671b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 368d49cd2b7SBarry Smith loTriFactor->solveInfo, 3695f80ce2aSJacob Faibussowitsch loTriFactor->solvePolicy, loTriFactor->solveBuffer)); 370d49cd2b7SBarry Smith #else 3715f80ce2aSJacob Faibussowitsch loTriFactor->solveInfo)); 372afb2bd1cSJunchao Zhang #endif 3739566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 3749566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0)); 375aa372e3fSPaul Mullowney 376da79fbbcSStefano Zampini /* assign the pointer */ 377aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->loTriFactorPtr = loTriFactor; 3782cbc15d9SMark loTriFactor->AA_h = AALo; 3799566063dSJacob Faibussowitsch PetscCallCUDA(cudaFreeHost(AiLo)); 3809566063dSJacob Faibussowitsch PetscCallCUDA(cudaFreeHost(AjLo)); 3819566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu((n+1+nzLower)*sizeof(int)+nzLower*sizeof(PetscScalar))); 382da79fbbcSStefano Zampini } else { /* update values only */ 3832cbc15d9SMark if (!loTriFactor->AA_h) { 3849566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void**) &loTriFactor->AA_h, nzLower*sizeof(PetscScalar))); 3852cbc15d9SMark } 386da79fbbcSStefano Zampini /* Fill the lower triangular matrix */ 3872cbc15d9SMark loTriFactor->AA_h[0] = 1.0; 388da79fbbcSStefano Zampini v = aa; 389da79fbbcSStefano Zampini vi = aj; 390da79fbbcSStefano Zampini offset = 1; 391da79fbbcSStefano Zampini for (i=1; i<n; i++) { 392da79fbbcSStefano Zampini nz = ai[i+1] - ai[i]; 3939566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&(loTriFactor->AA_h[offset]), v, nz)); 394da79fbbcSStefano Zampini offset += nz; 3952cbc15d9SMark loTriFactor->AA_h[offset] = 1.0; 396da79fbbcSStefano Zampini offset += 1; 397da79fbbcSStefano Zampini v += nz; 398da79fbbcSStefano Zampini } 3992cbc15d9SMark loTriFactor->csrMat->values->assign(loTriFactor->AA_h, loTriFactor->AA_h+nzLower); 4009566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(nzLower*sizeof(PetscScalar))); 401da79fbbcSStefano Zampini } 4029ae82921SPaul Mullowney } catch(char *ex) { 40398921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 4049ae82921SPaul Mullowney } 4059ae82921SPaul Mullowney } 4069ae82921SPaul Mullowney PetscFunctionReturn(0); 4079ae82921SPaul Mullowney } 4089ae82921SPaul Mullowney 409087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEBuildILUUpperTriMatrix(Mat A) 4109ae82921SPaul Mullowney { 4119ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 4129ae82921SPaul Mullowney PetscInt n = A->rmap->n; 4139ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 414aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 4159ae82921SPaul Mullowney const PetscInt *aj = a->j,*adiag = a->diag,*vi; 4169ae82921SPaul Mullowney const MatScalar *aa = a->a,*v; 4179ae82921SPaul Mullowney PetscInt *AiUp, *AjUp; 4189ae82921SPaul Mullowney PetscInt i,nz, nzUpper, offset; 4199ae82921SPaul Mullowney 4209ae82921SPaul Mullowney PetscFunctionBegin; 421cf00fe3bSKarl Rupp if (!n) PetscFunctionReturn(0); 422c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 4239ae82921SPaul Mullowney try { 4249ae82921SPaul Mullowney /* next, figure out the number of nonzeros in the upper triangular matrix. */ 4259ae82921SPaul Mullowney nzUpper = adiag[0]-adiag[n]; 426da79fbbcSStefano Zampini if (!upTriFactor) { 4272cbc15d9SMark PetscScalar *AAUp; 4282cbc15d9SMark 4299566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void**) &AAUp, nzUpper*sizeof(PetscScalar))); 4302cbc15d9SMark 4319ae82921SPaul Mullowney /* Allocate Space for the upper triangular matrix */ 4329566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void**) &AiUp, (n+1)*sizeof(PetscInt))); 4339566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void**) &AjUp, nzUpper*sizeof(PetscInt))); 4349ae82921SPaul Mullowney 4359ae82921SPaul Mullowney /* Fill the upper triangular matrix */ 4369ae82921SPaul Mullowney AiUp[0]=(PetscInt) 0; 4379ae82921SPaul Mullowney AiUp[n]=nzUpper; 4389ae82921SPaul Mullowney offset = nzUpper; 4399ae82921SPaul Mullowney for (i=n-1; i>=0; i--) { 4409ae82921SPaul Mullowney v = aa + adiag[i+1] + 1; 4419ae82921SPaul Mullowney vi = aj + adiag[i+1] + 1; 4429ae82921SPaul Mullowney 443e057df02SPaul Mullowney /* number of elements NOT on the diagonal */ 4449ae82921SPaul Mullowney nz = adiag[i] - adiag[i+1]-1; 4459ae82921SPaul Mullowney 446e057df02SPaul Mullowney /* decrement the offset */ 4479ae82921SPaul Mullowney offset -= (nz+1); 4489ae82921SPaul Mullowney 449e057df02SPaul Mullowney /* first, set the diagonal elements */ 4509ae82921SPaul Mullowney AjUp[offset] = (PetscInt) i; 45109f51544SAlejandro Lamas Daviña AAUp[offset] = (MatScalar)1./v[nz]; 4529ae82921SPaul Mullowney AiUp[i] = AiUp[i+1] - (nz+1); 4539ae82921SPaul Mullowney 4549566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&(AjUp[offset+1]), vi, nz)); 4559566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&(AAUp[offset+1]), v, nz)); 4569ae82921SPaul Mullowney } 4572205254eSKarl Rupp 458aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 4599566063dSJacob Faibussowitsch PetscCall(PetscNew(&upTriFactor)); 460da79fbbcSStefano Zampini upTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 4612205254eSKarl Rupp 462aa372e3fSPaul Mullowney /* Create the matrix description */ 4639566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&upTriFactor->descr)); 4649566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(upTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO)); 4651b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 4669566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL)); 467afb2bd1cSJunchao Zhang #else 4689566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR)); 469afb2bd1cSJunchao Zhang #endif 4709566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatFillMode(upTriFactor->descr, CUSPARSE_FILL_MODE_UPPER)); 4719566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatDiagType(upTriFactor->descr, CUSPARSE_DIAG_TYPE_NON_UNIT)); 472aa372e3fSPaul Mullowney 473aa372e3fSPaul Mullowney /* set the operation */ 474aa372e3fSPaul Mullowney upTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 475aa372e3fSPaul Mullowney 476aa372e3fSPaul Mullowney /* set the matrix */ 477aa372e3fSPaul Mullowney upTriFactor->csrMat = new CsrMatrix; 478aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows = n; 479aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols = n; 480aa372e3fSPaul Mullowney upTriFactor->csrMat->num_entries = nzUpper; 481aa372e3fSPaul Mullowney 482aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(n+1); 483aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->assign(AiUp, AiUp+n+1); 484aa372e3fSPaul Mullowney 485aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(nzUpper); 486aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->assign(AjUp, AjUp+nzUpper); 487aa372e3fSPaul Mullowney 488aa372e3fSPaul Mullowney upTriFactor->csrMat->values = new THRUSTARRAY(nzUpper); 489aa372e3fSPaul Mullowney upTriFactor->csrMat->values->assign(AAUp, AAUp+nzUpper); 490aa372e3fSPaul Mullowney 491afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 4929566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0)); 493261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseCreateCsrsvInfo(&upTriFactor->solveInfo)); 4941b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 495261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseXcsrsv_buffsize(cusparseTriFactors->handle, upTriFactor->solveOp, 496afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 497afb2bd1cSJunchao Zhang upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 498afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo, 4995f80ce2aSJacob Faibussowitsch &upTriFactor->solveBufferSize)); 5009566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&upTriFactor->solveBuffer,upTriFactor->solveBufferSize)); 501afb2bd1cSJunchao Zhang #endif 502afb2bd1cSJunchao Zhang 503aa372e3fSPaul Mullowney /* perform the solve analysis */ 504261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseXcsrsv_analysis(cusparseTriFactors->handle, upTriFactor->solveOp, 505aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 506aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 507d49cd2b7SBarry Smith upTriFactor->csrMat->column_indices->data().get(), 5081b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 509d49cd2b7SBarry Smith upTriFactor->solveInfo, 5105f80ce2aSJacob Faibussowitsch upTriFactor->solvePolicy, upTriFactor->solveBuffer)); 511d49cd2b7SBarry Smith #else 5125f80ce2aSJacob Faibussowitsch upTriFactor->solveInfo)); 513afb2bd1cSJunchao Zhang #endif 5149566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 5159566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0)); 516aa372e3fSPaul Mullowney 517da79fbbcSStefano Zampini /* assign the pointer */ 518aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->upTriFactorPtr = upTriFactor; 5192cbc15d9SMark upTriFactor->AA_h = AAUp; 5209566063dSJacob Faibussowitsch PetscCallCUDA(cudaFreeHost(AiUp)); 5219566063dSJacob Faibussowitsch PetscCallCUDA(cudaFreeHost(AjUp)); 5229566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu((n+1+nzUpper)*sizeof(int)+nzUpper*sizeof(PetscScalar))); 523da79fbbcSStefano Zampini } else { 5242cbc15d9SMark if (!upTriFactor->AA_h) { 5259566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void**) &upTriFactor->AA_h, nzUpper*sizeof(PetscScalar))); 5262cbc15d9SMark } 527da79fbbcSStefano Zampini /* Fill the upper triangular matrix */ 528da79fbbcSStefano Zampini offset = nzUpper; 529da79fbbcSStefano Zampini for (i=n-1; i>=0; i--) { 530da79fbbcSStefano Zampini v = aa + adiag[i+1] + 1; 531da79fbbcSStefano Zampini 532da79fbbcSStefano Zampini /* number of elements NOT on the diagonal */ 533da79fbbcSStefano Zampini nz = adiag[i] - adiag[i+1]-1; 534da79fbbcSStefano Zampini 535da79fbbcSStefano Zampini /* decrement the offset */ 536da79fbbcSStefano Zampini offset -= (nz+1); 537da79fbbcSStefano Zampini 538da79fbbcSStefano Zampini /* first, set the diagonal elements */ 5392cbc15d9SMark upTriFactor->AA_h[offset] = 1./v[nz]; 5409566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&(upTriFactor->AA_h[offset+1]), v, nz)); 541da79fbbcSStefano Zampini } 5422cbc15d9SMark upTriFactor->csrMat->values->assign(upTriFactor->AA_h, upTriFactor->AA_h+nzUpper); 5439566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(nzUpper*sizeof(PetscScalar))); 544da79fbbcSStefano Zampini } 5459ae82921SPaul Mullowney } catch(char *ex) { 54698921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 5479ae82921SPaul Mullowney } 5489ae82921SPaul Mullowney } 5499ae82921SPaul Mullowney PetscFunctionReturn(0); 5509ae82921SPaul Mullowney } 5519ae82921SPaul Mullowney 552087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(Mat A) 5539ae82921SPaul Mullowney { 5549ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 5559ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 5569ae82921SPaul Mullowney IS isrow = a->row,iscol = a->icol; 5579ae82921SPaul Mullowney PetscBool row_identity,col_identity; 5589ae82921SPaul Mullowney PetscInt n = A->rmap->n; 5599ae82921SPaul Mullowney 5609ae82921SPaul Mullowney PetscFunctionBegin; 56128b400f6SJacob Faibussowitsch PetscCheck(cusparseTriFactors,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 5629566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEBuildILULowerTriMatrix(A)); 5639566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEBuildILUUpperTriMatrix(A)); 5642205254eSKarl Rupp 565da79fbbcSStefano Zampini if (!cusparseTriFactors->workVector) { cusparseTriFactors->workVector = new THRUSTARRAY(n); } 566aa372e3fSPaul Mullowney cusparseTriFactors->nnz=a->nz; 5679ae82921SPaul Mullowney 568c70f7ee4SJunchao Zhang A->offloadmask = PETSC_OFFLOAD_BOTH; 569e057df02SPaul Mullowney /* lower triangular indices */ 5709566063dSJacob Faibussowitsch PetscCall(ISIdentity(isrow,&row_identity)); 571da79fbbcSStefano Zampini if (!row_identity && !cusparseTriFactors->rpermIndices) { 572da79fbbcSStefano Zampini const PetscInt *r; 573da79fbbcSStefano Zampini 5749566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isrow,&r)); 575aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices = new THRUSTINTARRAY(n); 576aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices->assign(r, r+n); 5779566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow,&r)); 5789566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(n*sizeof(PetscInt))); 579da79fbbcSStefano Zampini } 5809ae82921SPaul Mullowney 581e057df02SPaul Mullowney /* upper triangular indices */ 5829566063dSJacob Faibussowitsch PetscCall(ISIdentity(iscol,&col_identity)); 583da79fbbcSStefano Zampini if (!col_identity && !cusparseTriFactors->cpermIndices) { 584da79fbbcSStefano Zampini const PetscInt *c; 585da79fbbcSStefano Zampini 5869566063dSJacob Faibussowitsch PetscCall(ISGetIndices(iscol,&c)); 587aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices = new THRUSTINTARRAY(n); 588aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices->assign(c, c+n); 5899566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iscol,&c)); 5909566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(n*sizeof(PetscInt))); 591da79fbbcSStefano Zampini } 5929ae82921SPaul Mullowney PetscFunctionReturn(0); 5939ae82921SPaul Mullowney } 5949ae82921SPaul Mullowney 595087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEBuildICCTriMatrices(Mat A) 596087f3262SPaul Mullowney { 597087f3262SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 598087f3262SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 599aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 600aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 601087f3262SPaul Mullowney PetscInt *AiUp, *AjUp; 602087f3262SPaul Mullowney PetscScalar *AAUp; 603087f3262SPaul Mullowney PetscScalar *AALo; 604087f3262SPaul Mullowney PetscInt nzUpper = a->nz,n = A->rmap->n,i,offset,nz,j; 605087f3262SPaul Mullowney Mat_SeqSBAIJ *b = (Mat_SeqSBAIJ*)A->data; 606087f3262SPaul Mullowney const PetscInt *ai = b->i,*aj = b->j,*vj; 607087f3262SPaul Mullowney const MatScalar *aa = b->a,*v; 608087f3262SPaul Mullowney 609087f3262SPaul Mullowney PetscFunctionBegin; 610cf00fe3bSKarl Rupp if (!n) PetscFunctionReturn(0); 611c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 612087f3262SPaul Mullowney try { 6139566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void**) &AAUp, nzUpper*sizeof(PetscScalar))); 6149566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void**) &AALo, nzUpper*sizeof(PetscScalar))); 615da79fbbcSStefano Zampini if (!upTriFactor && !loTriFactor) { 616087f3262SPaul Mullowney /* Allocate Space for the upper triangular matrix */ 6179566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void**) &AiUp, (n+1)*sizeof(PetscInt))); 6189566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void**) &AjUp, nzUpper*sizeof(PetscInt))); 619087f3262SPaul Mullowney 620087f3262SPaul Mullowney /* Fill the upper triangular matrix */ 621087f3262SPaul Mullowney AiUp[0]=(PetscInt) 0; 622087f3262SPaul Mullowney AiUp[n]=nzUpper; 623087f3262SPaul Mullowney offset = 0; 624087f3262SPaul Mullowney for (i=0; i<n; i++) { 625087f3262SPaul Mullowney /* set the pointers */ 626087f3262SPaul Mullowney v = aa + ai[i]; 627087f3262SPaul Mullowney vj = aj + ai[i]; 628087f3262SPaul Mullowney nz = ai[i+1] - ai[i] - 1; /* exclude diag[i] */ 629087f3262SPaul Mullowney 630087f3262SPaul Mullowney /* first, set the diagonal elements */ 631087f3262SPaul Mullowney AjUp[offset] = (PetscInt) i; 63209f51544SAlejandro Lamas Daviña AAUp[offset] = (MatScalar)1.0/v[nz]; 633087f3262SPaul Mullowney AiUp[i] = offset; 63409f51544SAlejandro Lamas Daviña AALo[offset] = (MatScalar)1.0/v[nz]; 635087f3262SPaul Mullowney 636087f3262SPaul Mullowney offset+=1; 637087f3262SPaul Mullowney if (nz>0) { 6389566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&(AjUp[offset]), vj, nz)); 6399566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&(AAUp[offset]), v, nz)); 640087f3262SPaul Mullowney for (j=offset; j<offset+nz; j++) { 641087f3262SPaul Mullowney AAUp[j] = -AAUp[j]; 642087f3262SPaul Mullowney AALo[j] = AAUp[j]/v[nz]; 643087f3262SPaul Mullowney } 644087f3262SPaul Mullowney offset+=nz; 645087f3262SPaul Mullowney } 646087f3262SPaul Mullowney } 647087f3262SPaul Mullowney 648aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 6499566063dSJacob Faibussowitsch PetscCall(PetscNew(&upTriFactor)); 650da79fbbcSStefano Zampini upTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 651087f3262SPaul Mullowney 652aa372e3fSPaul Mullowney /* Create the matrix description */ 6539566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&upTriFactor->descr)); 6549566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(upTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO)); 6551b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 6569566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL)); 657afb2bd1cSJunchao Zhang #else 6589566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR)); 659afb2bd1cSJunchao Zhang #endif 6609566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatFillMode(upTriFactor->descr, CUSPARSE_FILL_MODE_UPPER)); 6619566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatDiagType(upTriFactor->descr, CUSPARSE_DIAG_TYPE_UNIT)); 662087f3262SPaul Mullowney 663aa372e3fSPaul Mullowney /* set the matrix */ 664aa372e3fSPaul Mullowney upTriFactor->csrMat = new CsrMatrix; 665aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows = A->rmap->n; 666aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols = A->cmap->n; 667aa372e3fSPaul Mullowney upTriFactor->csrMat->num_entries = a->nz; 668aa372e3fSPaul Mullowney 669aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 670aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->assign(AiUp, AiUp+A->rmap->n+1); 671aa372e3fSPaul Mullowney 672aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(a->nz); 673aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->assign(AjUp, AjUp+a->nz); 674aa372e3fSPaul Mullowney 675aa372e3fSPaul Mullowney upTriFactor->csrMat->values = new THRUSTARRAY(a->nz); 676aa372e3fSPaul Mullowney upTriFactor->csrMat->values->assign(AAUp, AAUp+a->nz); 677aa372e3fSPaul Mullowney 678afb2bd1cSJunchao Zhang /* set the operation */ 679afb2bd1cSJunchao Zhang upTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 680afb2bd1cSJunchao Zhang 681afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 6829566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0)); 683261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseCreateCsrsvInfo(&upTriFactor->solveInfo)); 6841b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 685261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseXcsrsv_buffsize(cusparseTriFactors->handle, upTriFactor->solveOp, 686afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 687afb2bd1cSJunchao Zhang upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 688afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo, 6895f80ce2aSJacob Faibussowitsch &upTriFactor->solveBufferSize)); 6909566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&upTriFactor->solveBuffer,upTriFactor->solveBufferSize)); 691afb2bd1cSJunchao Zhang #endif 692afb2bd1cSJunchao Zhang 693aa372e3fSPaul Mullowney /* perform the solve analysis */ 694261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseXcsrsv_analysis(cusparseTriFactors->handle, upTriFactor->solveOp, 695aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 696aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 697d49cd2b7SBarry Smith upTriFactor->csrMat->column_indices->data().get(), 6981b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 699d49cd2b7SBarry Smith upTriFactor->solveInfo, 7005f80ce2aSJacob Faibussowitsch upTriFactor->solvePolicy, upTriFactor->solveBuffer)); 701d49cd2b7SBarry Smith #else 7025f80ce2aSJacob Faibussowitsch upTriFactor->solveInfo)); 703afb2bd1cSJunchao Zhang #endif 7049566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 7059566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0)); 706aa372e3fSPaul Mullowney 707da79fbbcSStefano Zampini /* assign the pointer */ 708aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->upTriFactorPtr = upTriFactor; 709aa372e3fSPaul Mullowney 710aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 7119566063dSJacob Faibussowitsch PetscCall(PetscNew(&loTriFactor)); 712da79fbbcSStefano Zampini loTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 713aa372e3fSPaul Mullowney 714aa372e3fSPaul Mullowney /* Create the matrix description */ 7159566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&loTriFactor->descr)); 7169566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(loTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO)); 7171b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 7189566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL)); 719afb2bd1cSJunchao Zhang #else 7209566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR)); 721afb2bd1cSJunchao Zhang #endif 7229566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatFillMode(loTriFactor->descr, CUSPARSE_FILL_MODE_UPPER)); 7239566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatDiagType(loTriFactor->descr, CUSPARSE_DIAG_TYPE_NON_UNIT)); 724aa372e3fSPaul Mullowney 725aa372e3fSPaul Mullowney /* set the operation */ 726aa372e3fSPaul Mullowney loTriFactor->solveOp = CUSPARSE_OPERATION_TRANSPOSE; 727aa372e3fSPaul Mullowney 728aa372e3fSPaul Mullowney /* set the matrix */ 729aa372e3fSPaul Mullowney loTriFactor->csrMat = new CsrMatrix; 730aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows = A->rmap->n; 731aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols = A->cmap->n; 732aa372e3fSPaul Mullowney loTriFactor->csrMat->num_entries = a->nz; 733aa372e3fSPaul Mullowney 734aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 735aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->assign(AiUp, AiUp+A->rmap->n+1); 736aa372e3fSPaul Mullowney 737aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(a->nz); 738aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->assign(AjUp, AjUp+a->nz); 739aa372e3fSPaul Mullowney 740aa372e3fSPaul Mullowney loTriFactor->csrMat->values = new THRUSTARRAY(a->nz); 741aa372e3fSPaul Mullowney loTriFactor->csrMat->values->assign(AALo, AALo+a->nz); 742aa372e3fSPaul Mullowney 743afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 7449566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0)); 745261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseCreateCsrsvInfo(&loTriFactor->solveInfo)); 7461b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 747261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseXcsrsv_buffsize(cusparseTriFactors->handle, loTriFactor->solveOp, 748afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 749afb2bd1cSJunchao Zhang loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 750afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo, 7515f80ce2aSJacob Faibussowitsch &loTriFactor->solveBufferSize)); 7529566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&loTriFactor->solveBuffer,loTriFactor->solveBufferSize)); 753afb2bd1cSJunchao Zhang #endif 754afb2bd1cSJunchao Zhang 755aa372e3fSPaul Mullowney /* perform the solve analysis */ 756261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseXcsrsv_analysis(cusparseTriFactors->handle, loTriFactor->solveOp, 757aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 758aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 759d49cd2b7SBarry Smith loTriFactor->csrMat->column_indices->data().get(), 7601b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 761d49cd2b7SBarry Smith loTriFactor->solveInfo, 7625f80ce2aSJacob Faibussowitsch loTriFactor->solvePolicy, loTriFactor->solveBuffer)); 763d49cd2b7SBarry Smith #else 7645f80ce2aSJacob Faibussowitsch loTriFactor->solveInfo)); 765afb2bd1cSJunchao Zhang #endif 7669566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 7679566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0)); 768aa372e3fSPaul Mullowney 769da79fbbcSStefano Zampini /* assign the pointer */ 770aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->loTriFactorPtr = loTriFactor; 771087f3262SPaul Mullowney 7729566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(2*(((A->rmap->n+1)+(a->nz))*sizeof(int)+(a->nz)*sizeof(PetscScalar)))); 7739566063dSJacob Faibussowitsch PetscCallCUDA(cudaFreeHost(AiUp)); 7749566063dSJacob Faibussowitsch PetscCallCUDA(cudaFreeHost(AjUp)); 775da79fbbcSStefano Zampini } else { 776da79fbbcSStefano Zampini /* Fill the upper triangular matrix */ 777da79fbbcSStefano Zampini offset = 0; 778da79fbbcSStefano Zampini for (i=0; i<n; i++) { 779da79fbbcSStefano Zampini /* set the pointers */ 780da79fbbcSStefano Zampini v = aa + ai[i]; 781da79fbbcSStefano Zampini nz = ai[i+1] - ai[i] - 1; /* exclude diag[i] */ 782da79fbbcSStefano Zampini 783da79fbbcSStefano Zampini /* first, set the diagonal elements */ 784da79fbbcSStefano Zampini AAUp[offset] = 1.0/v[nz]; 785da79fbbcSStefano Zampini AALo[offset] = 1.0/v[nz]; 786da79fbbcSStefano Zampini 787da79fbbcSStefano Zampini offset+=1; 788da79fbbcSStefano Zampini if (nz>0) { 7899566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&(AAUp[offset]), v, nz)); 790da79fbbcSStefano Zampini for (j=offset; j<offset+nz; j++) { 791da79fbbcSStefano Zampini AAUp[j] = -AAUp[j]; 792da79fbbcSStefano Zampini AALo[j] = AAUp[j]/v[nz]; 793da79fbbcSStefano Zampini } 794da79fbbcSStefano Zampini offset+=nz; 795da79fbbcSStefano Zampini } 796da79fbbcSStefano Zampini } 79728b400f6SJacob Faibussowitsch PetscCheck(upTriFactor,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 79828b400f6SJacob Faibussowitsch PetscCheck(loTriFactor,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 799da79fbbcSStefano Zampini upTriFactor->csrMat->values->assign(AAUp, AAUp+a->nz); 800da79fbbcSStefano Zampini loTriFactor->csrMat->values->assign(AALo, AALo+a->nz); 8019566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(2*(a->nz)*sizeof(PetscScalar))); 802da79fbbcSStefano Zampini } 8039566063dSJacob Faibussowitsch PetscCallCUDA(cudaFreeHost(AAUp)); 8049566063dSJacob Faibussowitsch PetscCallCUDA(cudaFreeHost(AALo)); 805087f3262SPaul Mullowney } catch(char *ex) { 80698921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 807087f3262SPaul Mullowney } 808087f3262SPaul Mullowney } 809087f3262SPaul Mullowney PetscFunctionReturn(0); 810087f3262SPaul Mullowney } 811087f3262SPaul Mullowney 812087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEICCAnalysisAndCopyToGPU(Mat A) 8139ae82921SPaul Mullowney { 814087f3262SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 815087f3262SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 816087f3262SPaul Mullowney IS ip = a->row; 817087f3262SPaul Mullowney PetscBool perm_identity; 818087f3262SPaul Mullowney PetscInt n = A->rmap->n; 819087f3262SPaul Mullowney 820087f3262SPaul Mullowney PetscFunctionBegin; 82128b400f6SJacob Faibussowitsch PetscCheck(cusparseTriFactors,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 8229566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEBuildICCTriMatrices(A)); 823da79fbbcSStefano Zampini if (!cusparseTriFactors->workVector) { cusparseTriFactors->workVector = new THRUSTARRAY(n); } 824aa372e3fSPaul Mullowney cusparseTriFactors->nnz=(a->nz-n)*2 + n; 825aa372e3fSPaul Mullowney 826da79fbbcSStefano Zampini A->offloadmask = PETSC_OFFLOAD_BOTH; 827da79fbbcSStefano Zampini 828087f3262SPaul Mullowney /* lower triangular indices */ 8299566063dSJacob Faibussowitsch PetscCall(ISIdentity(ip,&perm_identity)); 830087f3262SPaul Mullowney if (!perm_identity) { 8314e4bbfaaSStefano Zampini IS iip; 832da79fbbcSStefano Zampini const PetscInt *irip,*rip; 8334e4bbfaaSStefano Zampini 8349566063dSJacob Faibussowitsch PetscCall(ISInvertPermutation(ip,PETSC_DECIDE,&iip)); 8359566063dSJacob Faibussowitsch PetscCall(ISGetIndices(iip,&irip)); 8369566063dSJacob Faibussowitsch PetscCall(ISGetIndices(ip,&rip)); 837aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices = new THRUSTINTARRAY(n); 838aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices->assign(rip, rip+n); 839aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices = new THRUSTINTARRAY(n); 8404e4bbfaaSStefano Zampini cusparseTriFactors->cpermIndices->assign(irip, irip+n); 8419566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iip,&irip)); 8429566063dSJacob Faibussowitsch PetscCall(ISDestroy(&iip)); 8439566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(ip,&rip)); 8449566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(2.*n*sizeof(PetscInt))); 845da79fbbcSStefano Zampini } 846087f3262SPaul Mullowney PetscFunctionReturn(0); 847087f3262SPaul Mullowney } 848087f3262SPaul Mullowney 849087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorNumeric_SeqAIJCUSPARSE(Mat B,Mat A,const MatFactorInfo *info) 850087f3262SPaul Mullowney { 851087f3262SPaul Mullowney Mat_SeqAIJ *b = (Mat_SeqAIJ*)B->data; 852087f3262SPaul Mullowney IS ip = b->row; 853087f3262SPaul Mullowney PetscBool perm_identity; 854087f3262SPaul Mullowney 855087f3262SPaul Mullowney PetscFunctionBegin; 8569566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyFromGPU(A)); 8579566063dSJacob Faibussowitsch PetscCall(MatCholeskyFactorNumeric_SeqAIJ(B,A,info)); 858ccdfe979SStefano Zampini B->offloadmask = PETSC_OFFLOAD_CPU; 859087f3262SPaul Mullowney /* determine which version of MatSolve needs to be used. */ 8609566063dSJacob Faibussowitsch PetscCall(ISIdentity(ip,&perm_identity)); 861087f3262SPaul Mullowney if (perm_identity) { 862087f3262SPaul Mullowney B->ops->solve = MatSolve_SeqAIJCUSPARSE_NaturalOrdering; 863087f3262SPaul Mullowney B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering; 8644e4bbfaaSStefano Zampini B->ops->matsolve = NULL; 8654e4bbfaaSStefano Zampini B->ops->matsolvetranspose = NULL; 866087f3262SPaul Mullowney } else { 867087f3262SPaul Mullowney B->ops->solve = MatSolve_SeqAIJCUSPARSE; 868087f3262SPaul Mullowney B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE; 8694e4bbfaaSStefano Zampini B->ops->matsolve = NULL; 8704e4bbfaaSStefano Zampini B->ops->matsolvetranspose = NULL; 871087f3262SPaul Mullowney } 872087f3262SPaul Mullowney 873087f3262SPaul Mullowney /* get the triangular factors */ 8749566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEICCAnalysisAndCopyToGPU(B)); 875087f3262SPaul Mullowney PetscFunctionReturn(0); 876087f3262SPaul Mullowney } 8779ae82921SPaul Mullowney 878b175d8bbSPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(Mat A) 879bda325fcSPaul Mullowney { 880bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 881aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 882aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 883da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT; 884da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT; 885aa372e3fSPaul Mullowney cusparseIndexBase_t indexBase; 886aa372e3fSPaul Mullowney cusparseMatrixType_t matrixType; 887aa372e3fSPaul Mullowney cusparseFillMode_t fillMode; 888aa372e3fSPaul Mullowney cusparseDiagType_t diagType; 889b175d8bbSPaul Mullowney 890bda325fcSPaul Mullowney PetscFunctionBegin; 891aa372e3fSPaul Mullowney /* allocate space for the transpose of the lower triangular factor */ 8929566063dSJacob Faibussowitsch PetscCall(PetscNew(&loTriFactorT)); 893da79fbbcSStefano Zampini loTriFactorT->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 894aa372e3fSPaul Mullowney 895aa372e3fSPaul Mullowney /* set the matrix descriptors of the lower triangular factor */ 896aa372e3fSPaul Mullowney matrixType = cusparseGetMatType(loTriFactor->descr); 897aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(loTriFactor->descr); 898aa372e3fSPaul Mullowney fillMode = cusparseGetMatFillMode(loTriFactor->descr)==CUSPARSE_FILL_MODE_UPPER ? 899aa372e3fSPaul Mullowney CUSPARSE_FILL_MODE_LOWER : CUSPARSE_FILL_MODE_UPPER; 900aa372e3fSPaul Mullowney diagType = cusparseGetMatDiagType(loTriFactor->descr); 901aa372e3fSPaul Mullowney 902aa372e3fSPaul Mullowney /* Create the matrix description */ 9039566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&loTriFactorT->descr)); 9049566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(loTriFactorT->descr, indexBase)); 9059566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(loTriFactorT->descr, matrixType)); 9069566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatFillMode(loTriFactorT->descr, fillMode)); 9079566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatDiagType(loTriFactorT->descr, diagType)); 908aa372e3fSPaul Mullowney 909aa372e3fSPaul Mullowney /* set the operation */ 910aa372e3fSPaul Mullowney loTriFactorT->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 911aa372e3fSPaul Mullowney 912aa372e3fSPaul Mullowney /* allocate GPU space for the CSC of the lower triangular factor*/ 913aa372e3fSPaul Mullowney loTriFactorT->csrMat = new CsrMatrix; 914afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows = loTriFactor->csrMat->num_cols; 915afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_cols = loTriFactor->csrMat->num_rows; 916aa372e3fSPaul Mullowney loTriFactorT->csrMat->num_entries = loTriFactor->csrMat->num_entries; 917afb2bd1cSJunchao Zhang loTriFactorT->csrMat->row_offsets = new THRUSTINTARRAY32(loTriFactorT->csrMat->num_rows+1); 918afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices = new THRUSTINTARRAY32(loTriFactorT->csrMat->num_entries); 919afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values = new THRUSTARRAY(loTriFactorT->csrMat->num_entries); 920aa372e3fSPaul Mullowney 921aa372e3fSPaul Mullowney /* compute the transpose of the lower triangular factor, i.e. the CSC */ 922afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 9239566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCsr2cscEx2_bufferSize(cusparseTriFactors->handle, loTriFactor->csrMat->num_rows, 924afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_cols, loTriFactor->csrMat->num_entries, 925afb2bd1cSJunchao Zhang loTriFactor->csrMat->values->data().get(), 926afb2bd1cSJunchao Zhang loTriFactor->csrMat->row_offsets->data().get(), 927afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), 928afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values->data().get(), 929afb2bd1cSJunchao Zhang loTriFactorT->csrMat->row_offsets->data().get(), loTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 930afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC,indexBase, 9315f80ce2aSJacob Faibussowitsch CUSPARSE_CSR2CSC_ALG1, &loTriFactor->csr2cscBufferSize)); 9329566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&loTriFactor->csr2cscBuffer,loTriFactor->csr2cscBufferSize)); 933afb2bd1cSJunchao Zhang #endif 934afb2bd1cSJunchao Zhang 9359566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0)); 9369566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparse_csr2csc(cusparseTriFactors->handle, loTriFactor->csrMat->num_rows, 937aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols, loTriFactor->csrMat->num_entries, 938aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), 939aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->data().get(), 940aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->data().get(), 941aa372e3fSPaul Mullowney loTriFactorT->csrMat->values->data().get(), 942afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 943afb2bd1cSJunchao Zhang loTriFactorT->csrMat->row_offsets->data().get(), loTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 944afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase, 9455f80ce2aSJacob Faibussowitsch CUSPARSE_CSR2CSC_ALG1, loTriFactor->csr2cscBuffer)); 946afb2bd1cSJunchao Zhang #else 947afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), 9485f80ce2aSJacob Faibussowitsch CUSPARSE_ACTION_NUMERIC, indexBase)); 949afb2bd1cSJunchao Zhang #endif 9509566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 9519566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0)); 952aa372e3fSPaul Mullowney 953afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 9549566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0)); 955261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseCreateCsrsvInfo(&loTriFactorT->solveInfo)); 9561b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 957261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseXcsrsv_buffsize(cusparseTriFactors->handle, loTriFactorT->solveOp, 958afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, loTriFactorT->csrMat->num_entries, loTriFactorT->descr, 959afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), 960afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices->data().get(), loTriFactorT->solveInfo, 9615f80ce2aSJacob Faibussowitsch &loTriFactorT->solveBufferSize)); 9629566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&loTriFactorT->solveBuffer,loTriFactorT->solveBufferSize)); 963afb2bd1cSJunchao Zhang #endif 964afb2bd1cSJunchao Zhang 965afb2bd1cSJunchao Zhang /* perform the solve analysis */ 966261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseXcsrsv_analysis(cusparseTriFactors->handle, loTriFactorT->solveOp, 967afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, loTriFactorT->csrMat->num_entries, loTriFactorT->descr, 968afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), 969d49cd2b7SBarry Smith loTriFactorT->csrMat->column_indices->data().get(), 9701b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 971d49cd2b7SBarry Smith loTriFactorT->solveInfo, 9725f80ce2aSJacob Faibussowitsch loTriFactorT->solvePolicy, loTriFactorT->solveBuffer)); 973d49cd2b7SBarry Smith #else 9745f80ce2aSJacob Faibussowitsch loTriFactorT->solveInfo)); 975afb2bd1cSJunchao Zhang #endif 9769566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 9779566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0)); 978aa372e3fSPaul Mullowney 979da79fbbcSStefano Zampini /* assign the pointer */ 980aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->loTriFactorPtrTranspose = loTriFactorT; 981aa372e3fSPaul Mullowney 982aa372e3fSPaul Mullowney /*********************************************/ 983aa372e3fSPaul Mullowney /* Now the Transpose of the Upper Tri Factor */ 984aa372e3fSPaul Mullowney /*********************************************/ 985aa372e3fSPaul Mullowney 986aa372e3fSPaul Mullowney /* allocate space for the transpose of the upper triangular factor */ 9879566063dSJacob Faibussowitsch PetscCall(PetscNew(&upTriFactorT)); 988da79fbbcSStefano Zampini upTriFactorT->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 989aa372e3fSPaul Mullowney 990aa372e3fSPaul Mullowney /* set the matrix descriptors of the upper triangular factor */ 991aa372e3fSPaul Mullowney matrixType = cusparseGetMatType(upTriFactor->descr); 992aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(upTriFactor->descr); 993aa372e3fSPaul Mullowney fillMode = cusparseGetMatFillMode(upTriFactor->descr)==CUSPARSE_FILL_MODE_UPPER ? 994aa372e3fSPaul Mullowney CUSPARSE_FILL_MODE_LOWER : CUSPARSE_FILL_MODE_UPPER; 995aa372e3fSPaul Mullowney diagType = cusparseGetMatDiagType(upTriFactor->descr); 996aa372e3fSPaul Mullowney 997aa372e3fSPaul Mullowney /* Create the matrix description */ 9989566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&upTriFactorT->descr)); 9999566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(upTriFactorT->descr, indexBase)); 10009566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(upTriFactorT->descr, matrixType)); 10019566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatFillMode(upTriFactorT->descr, fillMode)); 10029566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatDiagType(upTriFactorT->descr, diagType)); 1003aa372e3fSPaul Mullowney 1004aa372e3fSPaul Mullowney /* set the operation */ 1005aa372e3fSPaul Mullowney upTriFactorT->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 1006aa372e3fSPaul Mullowney 1007aa372e3fSPaul Mullowney /* allocate GPU space for the CSC of the upper triangular factor*/ 1008aa372e3fSPaul Mullowney upTriFactorT->csrMat = new CsrMatrix; 1009afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows = upTriFactor->csrMat->num_cols; 1010afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_cols = upTriFactor->csrMat->num_rows; 1011aa372e3fSPaul Mullowney upTriFactorT->csrMat->num_entries = upTriFactor->csrMat->num_entries; 1012afb2bd1cSJunchao Zhang upTriFactorT->csrMat->row_offsets = new THRUSTINTARRAY32(upTriFactorT->csrMat->num_rows+1); 1013afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices = new THRUSTINTARRAY32(upTriFactorT->csrMat->num_entries); 1014afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values = new THRUSTARRAY(upTriFactorT->csrMat->num_entries); 1015aa372e3fSPaul Mullowney 1016aa372e3fSPaul Mullowney /* compute the transpose of the upper triangular factor, i.e. the CSC */ 1017afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 10189566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCsr2cscEx2_bufferSize(cusparseTriFactors->handle,upTriFactor->csrMat->num_rows, 1019afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_cols, upTriFactor->csrMat->num_entries, 1020afb2bd1cSJunchao Zhang upTriFactor->csrMat->values->data().get(), 1021afb2bd1cSJunchao Zhang upTriFactor->csrMat->row_offsets->data().get(), 1022afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), 1023afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values->data().get(), 1024afb2bd1cSJunchao Zhang upTriFactorT->csrMat->row_offsets->data().get(), upTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1025afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC,indexBase, 10265f80ce2aSJacob Faibussowitsch CUSPARSE_CSR2CSC_ALG1, &upTriFactor->csr2cscBufferSize)); 10279566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&upTriFactor->csr2cscBuffer,upTriFactor->csr2cscBufferSize)); 1028afb2bd1cSJunchao Zhang #endif 1029afb2bd1cSJunchao Zhang 10309566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0)); 10319566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparse_csr2csc(cusparseTriFactors->handle, upTriFactor->csrMat->num_rows, 1032aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols, upTriFactor->csrMat->num_entries, 1033aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), 1034aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->data().get(), 1035aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->data().get(), 1036aa372e3fSPaul Mullowney upTriFactorT->csrMat->values->data().get(), 1037afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1038afb2bd1cSJunchao Zhang upTriFactorT->csrMat->row_offsets->data().get(), upTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1039afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase, 10405f80ce2aSJacob Faibussowitsch CUSPARSE_CSR2CSC_ALG1, upTriFactor->csr2cscBuffer)); 1041afb2bd1cSJunchao Zhang #else 1042afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), 10435f80ce2aSJacob Faibussowitsch CUSPARSE_ACTION_NUMERIC, indexBase)); 1044afb2bd1cSJunchao Zhang #endif 1045d49cd2b7SBarry Smith 10469566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 10479566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0)); 1048aa372e3fSPaul Mullowney 1049afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 10509566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0)); 1051261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseCreateCsrsvInfo(&upTriFactorT->solveInfo)); 10521b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1053261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseXcsrsv_buffsize(cusparseTriFactors->handle, upTriFactorT->solveOp, 1054afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, upTriFactorT->csrMat->num_entries, upTriFactorT->descr, 1055afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), 1056afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices->data().get(), upTriFactorT->solveInfo, 10575f80ce2aSJacob Faibussowitsch &upTriFactorT->solveBufferSize)); 10589566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&upTriFactorT->solveBuffer,upTriFactorT->solveBufferSize)); 1059afb2bd1cSJunchao Zhang #endif 1060afb2bd1cSJunchao Zhang 1061afb2bd1cSJunchao Zhang /* perform the solve analysis */ 10625f80ce2aSJacob Faibussowitsch /* christ, would it have killed you to put this stuff in a function????????? */ 1063261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseXcsrsv_analysis(cusparseTriFactors->handle, upTriFactorT->solveOp, 1064afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, upTriFactorT->csrMat->num_entries, upTriFactorT->descr, 1065afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), 1066d49cd2b7SBarry Smith upTriFactorT->csrMat->column_indices->data().get(), 10671b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1068d49cd2b7SBarry Smith upTriFactorT->solveInfo, 10695f80ce2aSJacob Faibussowitsch upTriFactorT->solvePolicy, upTriFactorT->solveBuffer)); 1070d49cd2b7SBarry Smith #else 10715f80ce2aSJacob Faibussowitsch upTriFactorT->solveInfo)); 1072afb2bd1cSJunchao Zhang #endif 1073d49cd2b7SBarry Smith 10749566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 10759566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0)); 1076aa372e3fSPaul Mullowney 1077da79fbbcSStefano Zampini /* assign the pointer */ 1078aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->upTriFactorPtrTranspose = upTriFactorT; 1079bda325fcSPaul Mullowney PetscFunctionReturn(0); 1080bda325fcSPaul Mullowney } 1081bda325fcSPaul Mullowney 1082a49f1ed0SStefano Zampini struct PetscScalarToPetscInt 1083a49f1ed0SStefano Zampini { 1084a49f1ed0SStefano Zampini __host__ __device__ 1085a49f1ed0SStefano Zampini PetscInt operator()(PetscScalar s) 1086a49f1ed0SStefano Zampini { 1087a49f1ed0SStefano Zampini return (PetscInt)PetscRealPart(s); 1088a49f1ed0SStefano Zampini } 1089a49f1ed0SStefano Zampini }; 1090a49f1ed0SStefano Zampini 10913606e59fSJunchao Zhang static PetscErrorCode MatSeqAIJCUSPARSEFormExplicitTranspose(Mat A) 1092bda325fcSPaul Mullowney { 1093aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 1094a49f1ed0SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *matstruct, *matstructT; 1095bda325fcSPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 1096bda325fcSPaul Mullowney cusparseStatus_t stat; 1097aa372e3fSPaul Mullowney cusparseIndexBase_t indexBase; 1098b175d8bbSPaul Mullowney 1099bda325fcSPaul Mullowney PetscFunctionBegin; 11009566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 1101a49f1ed0SStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->mat; 110228b400f6SJacob Faibussowitsch PetscCheck(matstruct,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing mat struct"); 1103a49f1ed0SStefano Zampini matstructT = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->matTranspose; 110408401ef6SPierre Jolivet PetscCheck(!A->transupdated || matstructT,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing matTranspose struct"); 11051a2c6b5cSJunchao Zhang if (A->transupdated) PetscFunctionReturn(0); 11069566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0)); 11079566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 1108a49f1ed0SStefano Zampini if (cusparsestruct->format != MAT_CUSPARSE_CSR) { 11099566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE)); 1110a49f1ed0SStefano Zampini } 1111a49f1ed0SStefano Zampini if (!cusparsestruct->matTranspose) { /* create cusparse matrix */ 1112aa372e3fSPaul Mullowney matstructT = new Mat_SeqAIJCUSPARSEMultStruct; 11139566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&matstructT->descr)); 1114aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(matstruct->descr); 11159566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(matstructT->descr, indexBase)); 11169566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(matstructT->descr, CUSPARSE_MATRIX_TYPE_GENERAL)); 1117aa372e3fSPaul Mullowney 1118b06137fdSPaul Mullowney /* set alpha and beta */ 11199566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(matstructT->alpha_one),sizeof(PetscScalar))); 11209566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(matstructT->beta_zero),sizeof(PetscScalar))); 11219566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(matstructT->beta_one), sizeof(PetscScalar))); 11229566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(matstructT->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice)); 11239566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(matstructT->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice)); 11249566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(matstructT->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice)); 1125b06137fdSPaul Mullowney 1126aa372e3fSPaul Mullowney if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 1127aa372e3fSPaul Mullowney CsrMatrix *matrixT = new CsrMatrix; 1128a49f1ed0SStefano Zampini matstructT->mat = matrixT; 1129554b8892SKarl Rupp matrixT->num_rows = A->cmap->n; 1130554b8892SKarl Rupp matrixT->num_cols = A->rmap->n; 1131aa372e3fSPaul Mullowney matrixT->num_entries = a->nz; 1132a8bd5306SMark Adams matrixT->row_offsets = new THRUSTINTARRAY32(matrixT->num_rows+1); 1133aa372e3fSPaul Mullowney matrixT->column_indices = new THRUSTINTARRAY32(a->nz); 1134aa372e3fSPaul Mullowney matrixT->values = new THRUSTARRAY(a->nz); 1135a3fdcf43SKarl Rupp 1136039c6fbaSStefano Zampini if (!cusparsestruct->rowoffsets_gpu) { cusparsestruct->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n+1); } 113781902715SJunchao Zhang cusparsestruct->rowoffsets_gpu->assign(a->i,a->i+A->rmap->n+1); 1138afb2bd1cSJunchao Zhang 1139afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 11403606e59fSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,2,1) 1141afb2bd1cSJunchao Zhang stat = cusparseCreateCsr(&matstructT->matDescr, 1142afb2bd1cSJunchao Zhang matrixT->num_rows, matrixT->num_cols, matrixT->num_entries, 1143afb2bd1cSJunchao Zhang matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), 1144afb2bd1cSJunchao Zhang matrixT->values->data().get(), 1145afb2bd1cSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, /* row offset, col idx type due to THRUSTINTARRAY32 */ 11469566063dSJacob Faibussowitsch indexBase,cusparse_scalartype);PetscCallCUSPARSE(stat); 11473606e59fSJunchao Zhang #else 11483606e59fSJunchao Zhang /* cusparse-11.x returns errors with zero-sized matrices until 11.2.1, 11493606e59fSJunchao Zhang see https://docs.nvidia.com/cuda/cuda-toolkit-release-notes/index.html#cusparse-11.2.1 11503606e59fSJunchao Zhang 11513606e59fSJunchao Zhang I don't know what a proper value should be for matstructT->matDescr with empty matrices, so I just set 11523606e59fSJunchao Zhang it to NULL to blow it up if one relies on it. Per https://docs.nvidia.com/cuda/cusparse/index.html#csr2cscEx2, 11533606e59fSJunchao Zhang when nnz = 0, matrixT->row_offsets[] should be filled with indexBase. So I also set it accordingly. 11543606e59fSJunchao Zhang */ 11553606e59fSJunchao Zhang if (matrixT->num_entries) { 11563606e59fSJunchao Zhang stat = cusparseCreateCsr(&matstructT->matDescr, 11573606e59fSJunchao Zhang matrixT->num_rows, matrixT->num_cols, matrixT->num_entries, 11583606e59fSJunchao Zhang matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), 11593606e59fSJunchao Zhang matrixT->values->data().get(), 11603606e59fSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, 11619566063dSJacob Faibussowitsch indexBase,cusparse_scalartype);PetscCallCUSPARSE(stat); 11623606e59fSJunchao Zhang 11633606e59fSJunchao Zhang } else { 11643606e59fSJunchao Zhang matstructT->matDescr = NULL; 11653606e59fSJunchao Zhang matrixT->row_offsets->assign(matrixT->row_offsets->size(),indexBase); 11663606e59fSJunchao Zhang } 11673606e59fSJunchao Zhang #endif 1168afb2bd1cSJunchao Zhang #endif 1169aa372e3fSPaul Mullowney } else if (cusparsestruct->format == MAT_CUSPARSE_ELL || cusparsestruct->format == MAT_CUSPARSE_HYB) { 1170afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1171afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 1172afb2bd1cSJunchao Zhang #else 1173aa372e3fSPaul Mullowney CsrMatrix *temp = new CsrMatrix; 117451c6d536SStefano Zampini CsrMatrix *tempT = new CsrMatrix; 117551c6d536SStefano Zampini /* First convert HYB to CSR */ 1176aa372e3fSPaul Mullowney temp->num_rows = A->rmap->n; 1177aa372e3fSPaul Mullowney temp->num_cols = A->cmap->n; 1178aa372e3fSPaul Mullowney temp->num_entries = a->nz; 1179aa372e3fSPaul Mullowney temp->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 1180aa372e3fSPaul Mullowney temp->column_indices = new THRUSTINTARRAY32(a->nz); 1181aa372e3fSPaul Mullowney temp->values = new THRUSTARRAY(a->nz); 1182aa372e3fSPaul Mullowney 1183aa372e3fSPaul Mullowney stat = cusparse_hyb2csr(cusparsestruct->handle, 1184aa372e3fSPaul Mullowney matstruct->descr, (cusparseHybMat_t)matstruct->mat, 1185aa372e3fSPaul Mullowney temp->values->data().get(), 1186aa372e3fSPaul Mullowney temp->row_offsets->data().get(), 11879566063dSJacob Faibussowitsch temp->column_indices->data().get());PetscCallCUSPARSE(stat); 1188aa372e3fSPaul Mullowney 1189aa372e3fSPaul Mullowney /* Next, convert CSR to CSC (i.e. the matrix transpose) */ 1190aa372e3fSPaul Mullowney tempT->num_rows = A->rmap->n; 1191aa372e3fSPaul Mullowney tempT->num_cols = A->cmap->n; 1192aa372e3fSPaul Mullowney tempT->num_entries = a->nz; 1193aa372e3fSPaul Mullowney tempT->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 1194aa372e3fSPaul Mullowney tempT->column_indices = new THRUSTINTARRAY32(a->nz); 1195aa372e3fSPaul Mullowney tempT->values = new THRUSTARRAY(a->nz); 1196aa372e3fSPaul Mullowney 1197aa372e3fSPaul Mullowney stat = cusparse_csr2csc(cusparsestruct->handle, temp->num_rows, 1198aa372e3fSPaul Mullowney temp->num_cols, temp->num_entries, 1199aa372e3fSPaul Mullowney temp->values->data().get(), 1200aa372e3fSPaul Mullowney temp->row_offsets->data().get(), 1201aa372e3fSPaul Mullowney temp->column_indices->data().get(), 1202aa372e3fSPaul Mullowney tempT->values->data().get(), 1203aa372e3fSPaul Mullowney tempT->column_indices->data().get(), 1204aa372e3fSPaul Mullowney tempT->row_offsets->data().get(), 12059566063dSJacob Faibussowitsch CUSPARSE_ACTION_NUMERIC, indexBase);PetscCallCUSPARSE(stat); 1206aa372e3fSPaul Mullowney 1207aa372e3fSPaul Mullowney /* Last, convert CSC to HYB */ 1208aa372e3fSPaul Mullowney cusparseHybMat_t hybMat; 12099566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateHybMat(&hybMat)); 1210aa372e3fSPaul Mullowney cusparseHybPartition_t partition = cusparsestruct->format==MAT_CUSPARSE_ELL ? 1211aa372e3fSPaul Mullowney CUSPARSE_HYB_PARTITION_MAX : CUSPARSE_HYB_PARTITION_AUTO; 1212aa372e3fSPaul Mullowney stat = cusparse_csr2hyb(cusparsestruct->handle, A->rmap->n, A->cmap->n, 1213aa372e3fSPaul Mullowney matstructT->descr, tempT->values->data().get(), 1214aa372e3fSPaul Mullowney tempT->row_offsets->data().get(), 1215aa372e3fSPaul Mullowney tempT->column_indices->data().get(), 12169566063dSJacob Faibussowitsch hybMat, 0, partition);PetscCallCUSPARSE(stat); 1217aa372e3fSPaul Mullowney 1218aa372e3fSPaul Mullowney /* assign the pointer */ 1219aa372e3fSPaul Mullowney matstructT->mat = hybMat; 12201a2c6b5cSJunchao Zhang A->transupdated = PETSC_TRUE; 1221aa372e3fSPaul Mullowney /* delete temporaries */ 1222aa372e3fSPaul Mullowney if (tempT) { 1223aa372e3fSPaul Mullowney if (tempT->values) delete (THRUSTARRAY*) tempT->values; 1224aa372e3fSPaul Mullowney if (tempT->column_indices) delete (THRUSTINTARRAY32*) tempT->column_indices; 1225aa372e3fSPaul Mullowney if (tempT->row_offsets) delete (THRUSTINTARRAY32*) tempT->row_offsets; 1226aa372e3fSPaul Mullowney delete (CsrMatrix*) tempT; 1227087f3262SPaul Mullowney } 1228aa372e3fSPaul Mullowney if (temp) { 1229aa372e3fSPaul Mullowney if (temp->values) delete (THRUSTARRAY*) temp->values; 1230aa372e3fSPaul Mullowney if (temp->column_indices) delete (THRUSTINTARRAY32*) temp->column_indices; 1231aa372e3fSPaul Mullowney if (temp->row_offsets) delete (THRUSTINTARRAY32*) temp->row_offsets; 1232aa372e3fSPaul Mullowney delete (CsrMatrix*) temp; 1233aa372e3fSPaul Mullowney } 1234afb2bd1cSJunchao Zhang #endif 1235aa372e3fSPaul Mullowney } 1236a49f1ed0SStefano Zampini } 1237a49f1ed0SStefano Zampini if (cusparsestruct->format == MAT_CUSPARSE_CSR) { /* transpose mat struct may be already present, update data */ 1238a49f1ed0SStefano Zampini CsrMatrix *matrix = (CsrMatrix*)matstruct->mat; 1239a49f1ed0SStefano Zampini CsrMatrix *matrixT = (CsrMatrix*)matstructT->mat; 124028b400f6SJacob Faibussowitsch PetscCheck(matrix,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix"); 124128b400f6SJacob Faibussowitsch PetscCheck(matrix->row_offsets,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix rows"); 124228b400f6SJacob Faibussowitsch PetscCheck(matrix->column_indices,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix cols"); 124328b400f6SJacob Faibussowitsch PetscCheck(matrix->values,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix values"); 124428b400f6SJacob Faibussowitsch PetscCheck(matrixT,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT"); 124528b400f6SJacob Faibussowitsch PetscCheck(matrixT->row_offsets,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT rows"); 124628b400f6SJacob Faibussowitsch PetscCheck(matrixT->column_indices,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT cols"); 124728b400f6SJacob Faibussowitsch PetscCheck(matrixT->values,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT values"); 1248a49f1ed0SStefano Zampini if (!cusparsestruct->rowoffsets_gpu) { /* this may be absent when we did not construct the transpose with csr2csc */ 1249a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n + 1); 1250a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu->assign(a->i,a->i + A->rmap->n + 1); 12519566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu((A->rmap->n + 1)*sizeof(PetscInt))); 1252a49f1ed0SStefano Zampini } 1253a49f1ed0SStefano Zampini if (!cusparsestruct->csr2csc_i) { 1254a49f1ed0SStefano Zampini THRUSTARRAY csr2csc_a(matrix->num_entries); 1255a49f1ed0SStefano Zampini PetscStackCallThrust(thrust::sequence(thrust::device, csr2csc_a.begin(), csr2csc_a.end(), 0.0)); 1256a49f1ed0SStefano Zampini 1257a49f1ed0SStefano Zampini indexBase = cusparseGetMatIndexBase(matstruct->descr); 1258a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1259a49f1ed0SStefano Zampini void *csr2cscBuffer; 1260a49f1ed0SStefano Zampini size_t csr2cscBufferSize; 1261a49f1ed0SStefano Zampini stat = cusparseCsr2cscEx2_bufferSize(cusparsestruct->handle, A->rmap->n, 1262a49f1ed0SStefano Zampini A->cmap->n, matrix->num_entries, 1263a49f1ed0SStefano Zampini matrix->values->data().get(), 1264a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu->data().get(), 1265a49f1ed0SStefano Zampini matrix->column_indices->data().get(), 1266a49f1ed0SStefano Zampini matrixT->values->data().get(), 1267a49f1ed0SStefano Zampini matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), cusparse_scalartype, 1268a49f1ed0SStefano Zampini CUSPARSE_ACTION_NUMERIC,indexBase, 12699566063dSJacob Faibussowitsch cusparsestruct->csr2cscAlg, &csr2cscBufferSize);PetscCallCUSPARSE(stat); 12709566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&csr2cscBuffer,csr2cscBufferSize)); 1271a49f1ed0SStefano Zampini #endif 1272a49f1ed0SStefano Zampini 12731a2c6b5cSJunchao Zhang if (matrix->num_entries) { 12741a2c6b5cSJunchao Zhang /* When there are no nonzeros, this routine mistakenly returns CUSPARSE_STATUS_INVALID_VALUE in 12751a2c6b5cSJunchao Zhang mat_tests-ex62_15_mpiaijcusparse on ranks 0 and 2 with CUDA-11. But CUDA-10 is OK. 12761a2c6b5cSJunchao Zhang I checked every parameters and they were just fine. I have no clue why cusparse complains. 12771a2c6b5cSJunchao Zhang 12781a2c6b5cSJunchao Zhang Per https://docs.nvidia.com/cuda/cusparse/index.html#csr2cscEx2, when nnz = 0, matrixT->row_offsets[] 12791a2c6b5cSJunchao Zhang should be filled with indexBase. So I just take a shortcut here. 12801a2c6b5cSJunchao Zhang */ 12811a2c6b5cSJunchao Zhang stat = cusparse_csr2csc(cusparsestruct->handle, A->rmap->n, 12821a2c6b5cSJunchao Zhang A->cmap->n,matrix->num_entries, 12831a2c6b5cSJunchao Zhang csr2csc_a.data().get(), 12841a2c6b5cSJunchao Zhang cusparsestruct->rowoffsets_gpu->data().get(), 12851a2c6b5cSJunchao Zhang matrix->column_indices->data().get(), 1286a49f1ed0SStefano Zampini matrixT->values->data().get(), 1287a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1288a49f1ed0SStefano Zampini matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), cusparse_scalartype, 1289a49f1ed0SStefano Zampini CUSPARSE_ACTION_NUMERIC,indexBase, 12909566063dSJacob Faibussowitsch cusparsestruct->csr2cscAlg, csr2cscBuffer);PetscCallCUSPARSE(stat); 1291a49f1ed0SStefano Zampini #else 1292a49f1ed0SStefano Zampini matrixT->column_indices->data().get(), matrixT->row_offsets->data().get(), 12939566063dSJacob Faibussowitsch CUSPARSE_ACTION_NUMERIC, indexBase);PetscCallCUSPARSE(stat); 1294a49f1ed0SStefano Zampini #endif 12951a2c6b5cSJunchao Zhang } else { 12961a2c6b5cSJunchao Zhang matrixT->row_offsets->assign(matrixT->row_offsets->size(),indexBase); 12971a2c6b5cSJunchao Zhang } 12981a2c6b5cSJunchao Zhang 1299a49f1ed0SStefano Zampini cusparsestruct->csr2csc_i = new THRUSTINTARRAY(matrix->num_entries); 1300a49f1ed0SStefano Zampini PetscStackCallThrust(thrust::transform(thrust::device,matrixT->values->begin(),matrixT->values->end(),cusparsestruct->csr2csc_i->begin(),PetscScalarToPetscInt())); 1301a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 13029566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(csr2cscBuffer)); 1303a49f1ed0SStefano Zampini #endif 1304a49f1ed0SStefano Zampini } 1305a49f1ed0SStefano Zampini PetscStackCallThrust(thrust::copy(thrust::device,thrust::make_permutation_iterator(matrix->values->begin(), cusparsestruct->csr2csc_i->begin()), 1306a49f1ed0SStefano Zampini thrust::make_permutation_iterator(matrix->values->begin(), cusparsestruct->csr2csc_i->end()), 1307a49f1ed0SStefano Zampini matrixT->values->begin())); 1308a49f1ed0SStefano Zampini } 13099566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 13109566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSEGenerateTranspose,A,0,0,0)); 1311213423ffSJunchao Zhang /* the compressed row indices is not used for matTranspose */ 1312213423ffSJunchao Zhang matstructT->cprowIndices = NULL; 1313aa372e3fSPaul Mullowney /* assign the pointer */ 1314aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSE*)A->spptr)->matTranspose = matstructT; 13151a2c6b5cSJunchao Zhang A->transupdated = PETSC_TRUE; 1316bda325fcSPaul Mullowney PetscFunctionReturn(0); 1317bda325fcSPaul Mullowney } 1318bda325fcSPaul Mullowney 1319a49f1ed0SStefano Zampini /* Why do we need to analyze the transposed matrix again? Can't we just use op(A) = CUSPARSE_OPERATION_TRANSPOSE in MatSolve_SeqAIJCUSPARSE? */ 13206fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE(Mat A,Vec bb,Vec xx) 1321bda325fcSPaul Mullowney { 1322c41cb2e2SAlejandro Lamas Daviña PetscInt n = xx->map->n; 1323465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1324465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1325465f34aeSAlejandro Lamas Daviña thrust::device_ptr<const PetscScalar> bGPU; 1326465f34aeSAlejandro Lamas Daviña thrust::device_ptr<PetscScalar> xGPU; 1327bda325fcSPaul Mullowney cusparseStatus_t stat; 1328bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1329aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1330aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1331aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1332bda325fcSPaul Mullowney 1333bda325fcSPaul Mullowney PetscFunctionBegin; 1334aa372e3fSPaul Mullowney /* Analyze the matrix and create the transpose ... on the fly */ 1335aa372e3fSPaul Mullowney if (!loTriFactorT && !upTriFactorT) { 13369566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(A)); 1337aa372e3fSPaul Mullowney loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1338aa372e3fSPaul Mullowney upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1339bda325fcSPaul Mullowney } 1340bda325fcSPaul Mullowney 1341bda325fcSPaul Mullowney /* Get the GPU pointers */ 13429566063dSJacob Faibussowitsch PetscCall(VecCUDAGetArrayWrite(xx,&xarray)); 13439566063dSJacob Faibussowitsch PetscCall(VecCUDAGetArrayRead(bb,&barray)); 1344c41cb2e2SAlejandro Lamas Daviña xGPU = thrust::device_pointer_cast(xarray); 1345c41cb2e2SAlejandro Lamas Daviña bGPU = thrust::device_pointer_cast(barray); 1346bda325fcSPaul Mullowney 13479566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 1348aa372e3fSPaul Mullowney /* First, reorder with the row permutation */ 1349a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->begin()), 1350c41cb2e2SAlejandro Lamas Daviña thrust::make_permutation_iterator(bGPU+n, cusparseTriFactors->rpermIndices->end()), 1351c41cb2e2SAlejandro Lamas Daviña xGPU); 1352aa372e3fSPaul Mullowney 1353aa372e3fSPaul Mullowney /* First, solve U */ 1354261a78b4SJunchao Zhang stat = cusparseXcsrsv_solve(cusparseTriFactors->handle, upTriFactorT->solveOp, 1355afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, 13561b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1357afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_entries, 1358afb2bd1cSJunchao Zhang #endif 1359afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactorT->descr, 1360aa372e3fSPaul Mullowney upTriFactorT->csrMat->values->data().get(), 1361aa372e3fSPaul Mullowney upTriFactorT->csrMat->row_offsets->data().get(), 1362aa372e3fSPaul Mullowney upTriFactorT->csrMat->column_indices->data().get(), 1363aa372e3fSPaul Mullowney upTriFactorT->solveInfo, 1364d49cd2b7SBarry Smith xarray, 13651b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1366d49cd2b7SBarry Smith tempGPU->data().get(), 13679566063dSJacob Faibussowitsch upTriFactorT->solvePolicy, upTriFactorT->solveBuffer);PetscCallCUSPARSE(stat); 1368d49cd2b7SBarry Smith #else 13699566063dSJacob Faibussowitsch tempGPU->data().get());PetscCallCUSPARSE(stat); 1370afb2bd1cSJunchao Zhang #endif 1371aa372e3fSPaul Mullowney 1372aa372e3fSPaul Mullowney /* Then, solve L */ 1373261a78b4SJunchao Zhang stat = cusparseXcsrsv_solve(cusparseTriFactors->handle, loTriFactorT->solveOp, 1374afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, 13751b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1376afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_entries, 1377afb2bd1cSJunchao Zhang #endif 1378afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactorT->descr, 1379aa372e3fSPaul Mullowney loTriFactorT->csrMat->values->data().get(), 1380aa372e3fSPaul Mullowney loTriFactorT->csrMat->row_offsets->data().get(), 1381aa372e3fSPaul Mullowney loTriFactorT->csrMat->column_indices->data().get(), 1382aa372e3fSPaul Mullowney loTriFactorT->solveInfo, 1383d49cd2b7SBarry Smith tempGPU->data().get(), 13841b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1385d49cd2b7SBarry Smith xarray, 13869566063dSJacob Faibussowitsch loTriFactorT->solvePolicy, loTriFactorT->solveBuffer);PetscCallCUSPARSE(stat); 1387d49cd2b7SBarry Smith #else 13889566063dSJacob Faibussowitsch xarray);PetscCallCUSPARSE(stat); 1389afb2bd1cSJunchao Zhang #endif 1390aa372e3fSPaul Mullowney 1391aa372e3fSPaul Mullowney /* Last, copy the solution, xGPU, into a temporary with the column permutation ... can't be done in place. */ 1392a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(xGPU, cusparseTriFactors->cpermIndices->begin()), 1393c41cb2e2SAlejandro Lamas Daviña thrust::make_permutation_iterator(xGPU+n, cusparseTriFactors->cpermIndices->end()), 1394aa372e3fSPaul Mullowney tempGPU->begin()); 1395aa372e3fSPaul Mullowney 1396aa372e3fSPaul Mullowney /* Copy the temporary to the full solution. */ 1397a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),tempGPU->begin(), tempGPU->end(), xGPU); 1398bda325fcSPaul Mullowney 1399bda325fcSPaul Mullowney /* restore */ 14009566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayRead(bb,&barray)); 14019566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayWrite(xx,&xarray)); 14029566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 14039566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n)); 1404bda325fcSPaul Mullowney PetscFunctionReturn(0); 1405bda325fcSPaul Mullowney } 1406bda325fcSPaul Mullowney 14076fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering(Mat A,Vec bb,Vec xx) 1408bda325fcSPaul Mullowney { 1409465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1410465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1411bda325fcSPaul Mullowney cusparseStatus_t stat; 1412bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1413aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1414aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1415aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1416bda325fcSPaul Mullowney 1417bda325fcSPaul Mullowney PetscFunctionBegin; 1418aa372e3fSPaul Mullowney /* Analyze the matrix and create the transpose ... on the fly */ 1419aa372e3fSPaul Mullowney if (!loTriFactorT && !upTriFactorT) { 14209566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(A)); 1421aa372e3fSPaul Mullowney loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1422aa372e3fSPaul Mullowney upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1423bda325fcSPaul Mullowney } 1424bda325fcSPaul Mullowney 1425bda325fcSPaul Mullowney /* Get the GPU pointers */ 14269566063dSJacob Faibussowitsch PetscCall(VecCUDAGetArrayWrite(xx,&xarray)); 14279566063dSJacob Faibussowitsch PetscCall(VecCUDAGetArrayRead(bb,&barray)); 1428bda325fcSPaul Mullowney 14299566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 1430aa372e3fSPaul Mullowney /* First, solve U */ 1431261a78b4SJunchao Zhang stat = cusparseXcsrsv_solve(cusparseTriFactors->handle, upTriFactorT->solveOp, 1432afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, 14331b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1434afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_entries, 1435afb2bd1cSJunchao Zhang #endif 1436afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactorT->descr, 1437aa372e3fSPaul Mullowney upTriFactorT->csrMat->values->data().get(), 1438aa372e3fSPaul Mullowney upTriFactorT->csrMat->row_offsets->data().get(), 1439aa372e3fSPaul Mullowney upTriFactorT->csrMat->column_indices->data().get(), 1440aa372e3fSPaul Mullowney upTriFactorT->solveInfo, 1441d49cd2b7SBarry Smith barray, 14421b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1443d49cd2b7SBarry Smith tempGPU->data().get(), 14449566063dSJacob Faibussowitsch upTriFactorT->solvePolicy, upTriFactorT->solveBuffer);PetscCallCUSPARSE(stat); 1445d49cd2b7SBarry Smith #else 14469566063dSJacob Faibussowitsch tempGPU->data().get());PetscCallCUSPARSE(stat); 1447afb2bd1cSJunchao Zhang #endif 1448aa372e3fSPaul Mullowney 1449aa372e3fSPaul Mullowney /* Then, solve L */ 1450261a78b4SJunchao Zhang stat = cusparseXcsrsv_solve(cusparseTriFactors->handle, loTriFactorT->solveOp, 1451afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, 14521b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1453afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_entries, 1454afb2bd1cSJunchao Zhang #endif 1455afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactorT->descr, 1456aa372e3fSPaul Mullowney loTriFactorT->csrMat->values->data().get(), 1457aa372e3fSPaul Mullowney loTriFactorT->csrMat->row_offsets->data().get(), 1458aa372e3fSPaul Mullowney loTriFactorT->csrMat->column_indices->data().get(), 1459aa372e3fSPaul Mullowney loTriFactorT->solveInfo, 1460d49cd2b7SBarry Smith tempGPU->data().get(), 14611b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1462d49cd2b7SBarry Smith xarray, 14639566063dSJacob Faibussowitsch loTriFactorT->solvePolicy, loTriFactorT->solveBuffer);PetscCallCUSPARSE(stat); 1464d49cd2b7SBarry Smith #else 14659566063dSJacob Faibussowitsch xarray);PetscCallCUSPARSE(stat); 1466afb2bd1cSJunchao Zhang #endif 1467bda325fcSPaul Mullowney 1468bda325fcSPaul Mullowney /* restore */ 14699566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayRead(bb,&barray)); 14709566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayWrite(xx,&xarray)); 14719566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 14729566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n)); 1473bda325fcSPaul Mullowney PetscFunctionReturn(0); 1474bda325fcSPaul Mullowney } 1475bda325fcSPaul Mullowney 14766fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE(Mat A,Vec bb,Vec xx) 14779ae82921SPaul Mullowney { 1478465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1479465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1480465f34aeSAlejandro Lamas Daviña thrust::device_ptr<const PetscScalar> bGPU; 1481465f34aeSAlejandro Lamas Daviña thrust::device_ptr<PetscScalar> xGPU; 14829ae82921SPaul Mullowney cusparseStatus_t stat; 14839ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1484aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 1485aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 1486aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 14879ae82921SPaul Mullowney 14889ae82921SPaul Mullowney PetscFunctionBegin; 1489ebc8f436SDominic Meiser 1490e057df02SPaul Mullowney /* Get the GPU pointers */ 14919566063dSJacob Faibussowitsch PetscCall(VecCUDAGetArrayWrite(xx,&xarray)); 14929566063dSJacob Faibussowitsch PetscCall(VecCUDAGetArrayRead(bb,&barray)); 1493c41cb2e2SAlejandro Lamas Daviña xGPU = thrust::device_pointer_cast(xarray); 1494c41cb2e2SAlejandro Lamas Daviña bGPU = thrust::device_pointer_cast(barray); 14959ae82921SPaul Mullowney 14969566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 1497aa372e3fSPaul Mullowney /* First, reorder with the row permutation */ 1498a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->begin()), 1499c41cb2e2SAlejandro Lamas Daviña thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->end()), 15004e4bbfaaSStefano Zampini tempGPU->begin()); 1501aa372e3fSPaul Mullowney 1502aa372e3fSPaul Mullowney /* Next, solve L */ 1503261a78b4SJunchao Zhang stat = cusparseXcsrsv_solve(cusparseTriFactors->handle, loTriFactor->solveOp, 1504afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, 15051b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1506afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_entries, 1507afb2bd1cSJunchao Zhang #endif 1508afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactor->descr, 1509aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), 1510aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->data().get(), 1511aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->data().get(), 1512aa372e3fSPaul Mullowney loTriFactor->solveInfo, 1513d49cd2b7SBarry Smith tempGPU->data().get(), 15141b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1515d49cd2b7SBarry Smith xarray, 15169566063dSJacob Faibussowitsch loTriFactor->solvePolicy, loTriFactor->solveBuffer);PetscCallCUSPARSE(stat); 1517d49cd2b7SBarry Smith #else 15189566063dSJacob Faibussowitsch xarray);PetscCallCUSPARSE(stat); 1519afb2bd1cSJunchao Zhang #endif 1520aa372e3fSPaul Mullowney 1521aa372e3fSPaul Mullowney /* Then, solve U */ 1522261a78b4SJunchao Zhang stat = cusparseXcsrsv_solve(cusparseTriFactors->handle, upTriFactor->solveOp, 1523afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, 15241b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1525afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_entries, 1526afb2bd1cSJunchao Zhang #endif 1527afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactor->descr, 1528aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), 1529aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->data().get(), 1530aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->data().get(), 1531d49cd2b7SBarry Smith upTriFactor->solveInfo,xarray, 15321b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1533d49cd2b7SBarry Smith tempGPU->data().get(), 15349566063dSJacob Faibussowitsch upTriFactor->solvePolicy, upTriFactor->solveBuffer);PetscCallCUSPARSE(stat); 1535d49cd2b7SBarry Smith #else 15369566063dSJacob Faibussowitsch tempGPU->data().get());PetscCallCUSPARSE(stat); 1537afb2bd1cSJunchao Zhang #endif 1538d49cd2b7SBarry Smith 15394e4bbfaaSStefano Zampini /* Last, reorder with the column permutation */ 1540a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(tempGPU->begin(), cusparseTriFactors->cpermIndices->begin()), 15414e4bbfaaSStefano Zampini thrust::make_permutation_iterator(tempGPU->begin(), cusparseTriFactors->cpermIndices->end()), 15424e4bbfaaSStefano Zampini xGPU); 15439ae82921SPaul Mullowney 15449566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayRead(bb,&barray)); 15459566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayWrite(xx,&xarray)); 15469566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 15479566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n)); 15489ae82921SPaul Mullowney PetscFunctionReturn(0); 15499ae82921SPaul Mullowney } 15509ae82921SPaul Mullowney 15516fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE_NaturalOrdering(Mat A,Vec bb,Vec xx) 15529ae82921SPaul Mullowney { 1553465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1554465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 15559ae82921SPaul Mullowney cusparseStatus_t stat; 15569ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1557aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 1558aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 1559aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 15609ae82921SPaul Mullowney 15619ae82921SPaul Mullowney PetscFunctionBegin; 1562e057df02SPaul Mullowney /* Get the GPU pointers */ 15639566063dSJacob Faibussowitsch PetscCall(VecCUDAGetArrayWrite(xx,&xarray)); 15649566063dSJacob Faibussowitsch PetscCall(VecCUDAGetArrayRead(bb,&barray)); 15659ae82921SPaul Mullowney 15669566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 1567aa372e3fSPaul Mullowney /* First, solve L */ 1568261a78b4SJunchao Zhang stat = cusparseXcsrsv_solve(cusparseTriFactors->handle, loTriFactor->solveOp, 1569afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, 15701b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1571afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_entries, 1572afb2bd1cSJunchao Zhang #endif 1573afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactor->descr, 1574aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), 1575aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->data().get(), 1576aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->data().get(), 1577aa372e3fSPaul Mullowney loTriFactor->solveInfo, 1578d49cd2b7SBarry Smith barray, 15791b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1580d49cd2b7SBarry Smith tempGPU->data().get(), 15819566063dSJacob Faibussowitsch loTriFactor->solvePolicy,loTriFactor->solveBuffer);PetscCallCUSPARSE(stat); 1582d49cd2b7SBarry Smith #else 15839566063dSJacob Faibussowitsch tempGPU->data().get());PetscCallCUSPARSE(stat); 1584afb2bd1cSJunchao Zhang #endif 1585d49cd2b7SBarry Smith 1586aa372e3fSPaul Mullowney /* Next, solve U */ 1587261a78b4SJunchao Zhang stat = cusparseXcsrsv_solve(cusparseTriFactors->handle, upTriFactor->solveOp, 1588afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, 15891b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1590afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_entries, 1591afb2bd1cSJunchao Zhang #endif 1592afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactor->descr, 1593aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), 1594aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->data().get(), 1595aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->data().get(), 1596aa372e3fSPaul Mullowney upTriFactor->solveInfo, 1597d49cd2b7SBarry Smith tempGPU->data().get(), 15981b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1599d49cd2b7SBarry Smith xarray, 16009566063dSJacob Faibussowitsch upTriFactor->solvePolicy, upTriFactor->solveBuffer);PetscCallCUSPARSE(stat); 1601d49cd2b7SBarry Smith #else 16029566063dSJacob Faibussowitsch xarray);PetscCallCUSPARSE(stat); 1603afb2bd1cSJunchao Zhang #endif 16049ae82921SPaul Mullowney 16059566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayRead(bb,&barray)); 16069566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayWrite(xx,&xarray)); 16079566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 16089566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n)); 16099ae82921SPaul Mullowney PetscFunctionReturn(0); 16109ae82921SPaul Mullowney } 16119ae82921SPaul Mullowney 1612da112707SJunchao Zhang #if CUSPARSE_VERSION >= 11500 1613da112707SJunchao Zhang /* cusparseSpSV_solve() and friends first appeared in cusparse-11.3 */ 1614da112707SJunchao Zhang static PetscErrorCode MatSolve_SeqAIJCUSPARSE_ILU0(Mat fact,Vec b,Vec x) 1615da112707SJunchao Zhang { 1616da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *fs = (Mat_SeqAIJCUSPARSETriFactors*)fact->spptr; 1617da112707SJunchao Zhang Mat_SeqAIJ *aij = (Mat_SeqAIJ*)fact->data; 1618da112707SJunchao Zhang const PetscScalar *barray; 1619da112707SJunchao Zhang PetscScalar *xarray; 1620da112707SJunchao Zhang 1621da112707SJunchao Zhang PetscFunctionBegin; 1622da112707SJunchao Zhang PetscCall(VecCUDAGetArrayWrite(x,&xarray)); 1623da112707SJunchao Zhang PetscCall(VecCUDAGetArrayRead(b,&barray)); 1624da112707SJunchao Zhang PetscCall(PetscLogGpuTimeBegin()); 1625da112707SJunchao Zhang 1626da112707SJunchao Zhang /* Solve L*y = b */ 1627da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDnVecSetValues(fs->dnVecDescr_X,(void*)barray)); 1628da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDnVecSetValues(fs->dnVecDescr_Y,fs->Y)); 1629da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_solve(fs->handle, 1630da112707SJunchao Zhang CUSPARSE_OPERATION_NON_TRANSPOSE, 1631da112707SJunchao Zhang &PETSC_CUSPARSE_ONE, 1632da112707SJunchao Zhang fs->spMatDescr_L, /* L Y = X */ 1633da112707SJunchao Zhang fs->dnVecDescr_X, 1634da112707SJunchao Zhang fs->dnVecDescr_Y, 1635da112707SJunchao Zhang cusparse_scalartype, 1636da112707SJunchao Zhang CUSPARSE_SPSV_ALG_DEFAULT, 1637da112707SJunchao Zhang fs->spsvDescr_L)); 1638da112707SJunchao Zhang 1639da112707SJunchao Zhang /* Solve U*x = y */ 1640da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDnVecSetValues(fs->dnVecDescr_X,xarray)); 1641da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_solve(fs->handle, 1642da112707SJunchao Zhang CUSPARSE_OPERATION_NON_TRANSPOSE, 1643da112707SJunchao Zhang &PETSC_CUSPARSE_ONE, 1644da112707SJunchao Zhang fs->spMatDescr_U, /* U X = Y */ 1645da112707SJunchao Zhang fs->dnVecDescr_Y, 1646da112707SJunchao Zhang fs->dnVecDescr_X, 1647da112707SJunchao Zhang cusparse_scalartype, 1648da112707SJunchao Zhang CUSPARSE_SPSV_ALG_DEFAULT, 1649da112707SJunchao Zhang fs->spsvDescr_U)); 1650da112707SJunchao Zhang 1651da112707SJunchao Zhang PetscCall(VecCUDARestoreArrayRead(b,&barray)); 1652da112707SJunchao Zhang PetscCall(VecCUDARestoreArrayWrite(x,&xarray)); 1653da112707SJunchao Zhang 1654da112707SJunchao Zhang PetscCall(PetscLogGpuTimeEnd()); 1655da112707SJunchao Zhang PetscCall(PetscLogGpuFlops(2.0*aij->nz - fact->rmap->n)); 1656da112707SJunchao Zhang PetscFunctionReturn(0); 1657da112707SJunchao Zhang } 1658da112707SJunchao Zhang 1659da112707SJunchao Zhang static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE_ILU0(Mat fact,Vec b,Vec x) 1660da112707SJunchao Zhang { 1661da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *fs = (Mat_SeqAIJCUSPARSETriFactors*)fact->spptr; 1662da112707SJunchao Zhang Mat_SeqAIJ *aij = (Mat_SeqAIJ*)fact->data; 1663da112707SJunchao Zhang const PetscScalar *barray; 1664da112707SJunchao Zhang PetscScalar *xarray; 1665da112707SJunchao Zhang 1666da112707SJunchao Zhang PetscFunctionBegin; 1667da112707SJunchao Zhang if (!fs->builtSolveTranspose) { /* Call MatSolveTranspose() for the first time */ 1668da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_createDescr(&fs->spsvDescr_Lt)); 1669da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_bufferSize(fs->handle, 1670da112707SJunchao Zhang CUSPARSE_OPERATION_TRANSPOSE, 1671da112707SJunchao Zhang &PETSC_CUSPARSE_ONE, 1672da112707SJunchao Zhang fs->spMatDescr_L, /* The matrix is still L. We only do tranpose solve with it */ 1673da112707SJunchao Zhang fs->dnVecDescr_X, 1674da112707SJunchao Zhang fs->dnVecDescr_Y, 1675da112707SJunchao Zhang cusparse_scalartype, 1676da112707SJunchao Zhang CUSPARSE_SPSV_ALG_DEFAULT, 1677da112707SJunchao Zhang fs->spsvDescr_Lt, 1678da112707SJunchao Zhang &fs->spsvBufferSize_Lt)); 1679da112707SJunchao Zhang 1680da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_createDescr(&fs->spsvDescr_Ut)); 1681da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_bufferSize(fs->handle, 1682da112707SJunchao Zhang CUSPARSE_OPERATION_TRANSPOSE, 1683da112707SJunchao Zhang &PETSC_CUSPARSE_ONE, 1684da112707SJunchao Zhang fs->spMatDescr_U, 1685da112707SJunchao Zhang fs->dnVecDescr_X, 1686da112707SJunchao Zhang fs->dnVecDescr_Y, 1687da112707SJunchao Zhang cusparse_scalartype, 1688da112707SJunchao Zhang CUSPARSE_SPSV_ALG_DEFAULT, 1689da112707SJunchao Zhang fs->spsvDescr_Ut, 1690da112707SJunchao Zhang &fs->spsvBufferSize_Ut)); 1691da112707SJunchao Zhang 1692da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void**)&fs->spsvBuffer_Ut,fs->spsvBufferSize_Ut)); 1693da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void**)&fs->spsvBuffer_Lt,fs->spsvBufferSize_Lt)); 1694da112707SJunchao Zhang 1695da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_analysis(fs->handle, 1696da112707SJunchao Zhang CUSPARSE_OPERATION_TRANSPOSE, 1697da112707SJunchao Zhang &PETSC_CUSPARSE_ONE, 1698da112707SJunchao Zhang fs->spMatDescr_L, 1699da112707SJunchao Zhang fs->dnVecDescr_X, 1700da112707SJunchao Zhang fs->dnVecDescr_Y, 1701da112707SJunchao Zhang cusparse_scalartype, 1702da112707SJunchao Zhang CUSPARSE_SPSV_ALG_DEFAULT, 1703da112707SJunchao Zhang fs->spsvDescr_Lt, 1704da112707SJunchao Zhang fs->spsvBuffer_Lt)); 1705da112707SJunchao Zhang 1706da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_analysis(fs->handle, 1707da112707SJunchao Zhang CUSPARSE_OPERATION_TRANSPOSE, 1708da112707SJunchao Zhang &PETSC_CUSPARSE_ONE, 1709da112707SJunchao Zhang fs->spMatDescr_U, 1710da112707SJunchao Zhang fs->dnVecDescr_X, 1711da112707SJunchao Zhang fs->dnVecDescr_Y, 1712da112707SJunchao Zhang cusparse_scalartype, 1713da112707SJunchao Zhang CUSPARSE_SPSV_ALG_DEFAULT, 1714da112707SJunchao Zhang fs->spsvDescr_Ut, 1715da112707SJunchao Zhang fs->spsvBuffer_Ut)); 1716da112707SJunchao Zhang fs->builtSolveTranspose = PETSC_TRUE; 1717da112707SJunchao Zhang } 1718da112707SJunchao Zhang 1719da112707SJunchao Zhang PetscCall(VecCUDAGetArrayWrite(x,&xarray)); 1720da112707SJunchao Zhang PetscCall(VecCUDAGetArrayRead(b,&barray)); 1721da112707SJunchao Zhang PetscCall(PetscLogGpuTimeBegin()); 1722da112707SJunchao Zhang 1723da112707SJunchao Zhang /* Solve Ut*y = b */ 1724da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDnVecSetValues(fs->dnVecDescr_X,(void*)barray)); 1725da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDnVecSetValues(fs->dnVecDescr_Y,fs->Y)); 1726da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_solve(fs->handle, 1727da112707SJunchao Zhang CUSPARSE_OPERATION_TRANSPOSE, 1728da112707SJunchao Zhang &PETSC_CUSPARSE_ONE, 1729da112707SJunchao Zhang fs->spMatDescr_U, /* Ut Y = X */ 1730da112707SJunchao Zhang fs->dnVecDescr_X, 1731da112707SJunchao Zhang fs->dnVecDescr_Y, 1732da112707SJunchao Zhang cusparse_scalartype, 1733da112707SJunchao Zhang CUSPARSE_SPSV_ALG_DEFAULT, 1734da112707SJunchao Zhang fs->spsvDescr_Ut)); 1735da112707SJunchao Zhang 1736da112707SJunchao Zhang /* Solve Lt*x = y */ 1737da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDnVecSetValues(fs->dnVecDescr_X,xarray)); 1738da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_solve(fs->handle, 1739da112707SJunchao Zhang CUSPARSE_OPERATION_TRANSPOSE, 1740da112707SJunchao Zhang &PETSC_CUSPARSE_ONE, 1741da112707SJunchao Zhang fs->spMatDescr_L, /* Lt X = Y */ 1742da112707SJunchao Zhang fs->dnVecDescr_Y, 1743da112707SJunchao Zhang fs->dnVecDescr_X, 1744da112707SJunchao Zhang cusparse_scalartype, 1745da112707SJunchao Zhang CUSPARSE_SPSV_ALG_DEFAULT, 1746da112707SJunchao Zhang fs->spsvDescr_Lt)); 1747da112707SJunchao Zhang 1748da112707SJunchao Zhang PetscCall(VecCUDARestoreArrayRead(b,&barray)); 1749da112707SJunchao Zhang PetscCall(VecCUDARestoreArrayWrite(x,&xarray)); 1750da112707SJunchao Zhang PetscCall(PetscLogGpuTimeEnd()); 1751da112707SJunchao Zhang PetscCall(PetscLogGpuFlops(2.0*aij->nz - fact->rmap->n)); 1752da112707SJunchao Zhang PetscFunctionReturn(0); 1753da112707SJunchao Zhang } 1754da112707SJunchao Zhang 1755da112707SJunchao Zhang static PetscErrorCode MatILUFactorNumeric_SeqAIJCUSPARSE_ILU0(Mat fact,Mat A,const MatFactorInfo *info) 1756da112707SJunchao Zhang { 1757da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *fs = (Mat_SeqAIJCUSPARSETriFactors*)fact->spptr; 1758da112707SJunchao Zhang Mat_SeqAIJ *aij = (Mat_SeqAIJ*)fact->data; 1759da112707SJunchao Zhang Mat_SeqAIJCUSPARSE *Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 1760da112707SJunchao Zhang CsrMatrix *Acsr; 1761da112707SJunchao Zhang PetscInt m,nz; 1762da112707SJunchao Zhang PetscBool flg; 1763da112707SJunchao Zhang 1764da112707SJunchao Zhang PetscFunctionBegin; 1765da112707SJunchao Zhang if (PetscDefined(USE_DEBUG)) { 1766da112707SJunchao Zhang PetscCall(PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg)); 1767da112707SJunchao Zhang PetscCheck(flg,PetscObjectComm((PetscObject)A),PETSC_ERR_GPU,"Expected MATSEQAIJCUSPARSE, but input is %s",((PetscObject)A)->type_name); 1768da112707SJunchao Zhang } 1769da112707SJunchao Zhang 1770da112707SJunchao Zhang /* Copy A's value to fact */ 1771da112707SJunchao Zhang m = fact->rmap->n; 1772da112707SJunchao Zhang nz = aij->nz; 1773da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 1774da112707SJunchao Zhang Acsr = (CsrMatrix*)Acusp->mat->mat; 1775da112707SJunchao Zhang PetscCallCUDA(cudaMemcpyAsync(fs->csrVal,Acsr->values->data().get(),sizeof(PetscScalar)*nz,cudaMemcpyDeviceToDevice,PetscDefaultCudaStream)); 1776da112707SJunchao Zhang 1777da112707SJunchao Zhang /* Factorize fact inplace */ 1778da112707SJunchao Zhang if (m) PetscCallCUSPARSE(cusparseXcsrilu02(fs->handle, m, nz, /* cusparseXcsrilu02 errors out with empty matrices (m=0) */ 1779da112707SJunchao Zhang fs->matDescr_M, 1780da112707SJunchao Zhang fs->csrVal, 1781da112707SJunchao Zhang fs->csrRowPtr, 1782da112707SJunchao Zhang fs->csrColIdx, 1783da112707SJunchao Zhang fs->ilu0Info_M, 1784da112707SJunchao Zhang fs->policy_M, 1785da112707SJunchao Zhang fs->factBuffer_M)); 1786da112707SJunchao Zhang if (PetscDefined(USE_DEBUG)) { 1787da112707SJunchao Zhang int numerical_zero; 1788da112707SJunchao Zhang cusparseStatus_t status; 1789da112707SJunchao Zhang status = cusparseXcsrilu02_zeroPivot(fs->handle, fs->ilu0Info_M, &numerical_zero); 1790da112707SJunchao Zhang PetscAssert(CUSPARSE_STATUS_ZERO_PIVOT != status,PETSC_COMM_SELF,PETSC_ERR_USER_INPUT,"Numerical zero pivot detected in csrilu02: A(%d,%d) is zero",numerical_zero,numerical_zero); 1791da112707SJunchao Zhang } 1792da112707SJunchao Zhang 1793da112707SJunchao Zhang /* From my experiment, cusparseSpSV_analysis() is numeric, i.e., it requires valid matrix values, therefore, we do it after cusparseXcsrilu02() */ 1794da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_analysis(fs->handle, 1795da112707SJunchao Zhang CUSPARSE_OPERATION_NON_TRANSPOSE, 1796da112707SJunchao Zhang &PETSC_CUSPARSE_ONE, 1797da112707SJunchao Zhang fs->spMatDescr_L, 1798da112707SJunchao Zhang fs->dnVecDescr_X, 1799da112707SJunchao Zhang fs->dnVecDescr_Y, 1800da112707SJunchao Zhang cusparse_scalartype, 1801da112707SJunchao Zhang CUSPARSE_SPSV_ALG_DEFAULT, 1802da112707SJunchao Zhang fs->spsvDescr_L, 1803da112707SJunchao Zhang fs->spsvBuffer_L)); 1804da112707SJunchao Zhang 1805da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_analysis(fs->handle, 1806da112707SJunchao Zhang CUSPARSE_OPERATION_NON_TRANSPOSE, 1807da112707SJunchao Zhang &PETSC_CUSPARSE_ONE, 1808da112707SJunchao Zhang fs->spMatDescr_U, 1809da112707SJunchao Zhang fs->dnVecDescr_X, 1810da112707SJunchao Zhang fs->dnVecDescr_Y, 1811da112707SJunchao Zhang cusparse_scalartype, 1812da112707SJunchao Zhang CUSPARSE_SPSV_ALG_DEFAULT, 1813da112707SJunchao Zhang fs->spsvDescr_U, 1814da112707SJunchao Zhang fs->spsvBuffer_U)); 1815da112707SJunchao Zhang 1816da112707SJunchao Zhang fact->offloadmask = PETSC_OFFLOAD_GPU; 1817da112707SJunchao Zhang fact->ops->solve = MatSolve_SeqAIJCUSPARSE_ILU0; 1818da112707SJunchao Zhang fact->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE_ILU0; 1819da112707SJunchao Zhang fact->ops->matsolve = NULL; 1820da112707SJunchao Zhang fact->ops->matsolvetranspose = NULL; 1821da112707SJunchao Zhang PetscCall(PetscLogGpuFlops(fs->numericFactFlops)); 1822da112707SJunchao Zhang PetscFunctionReturn(0); 1823da112707SJunchao Zhang } 1824da112707SJunchao Zhang 1825da112707SJunchao Zhang static PetscErrorCode MatILUFactorSymbolic_SeqAIJCUSPARSE_ILU0(Mat fact,Mat A,IS isrow,IS iscol,const MatFactorInfo *info) 1826da112707SJunchao Zhang { 1827da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *fs = (Mat_SeqAIJCUSPARSETriFactors*)fact->spptr; 1828da112707SJunchao Zhang Mat_SeqAIJ *aij = (Mat_SeqAIJ*)fact->data; 1829da112707SJunchao Zhang PetscInt m,nz; 1830da112707SJunchao Zhang 1831da112707SJunchao Zhang PetscFunctionBegin; 1832da112707SJunchao Zhang if (PetscDefined(USE_DEBUG)) { 1833da112707SJunchao Zhang PetscInt i; 1834da112707SJunchao Zhang PetscBool flg,missing; 1835da112707SJunchao Zhang 1836da112707SJunchao Zhang PetscCall(PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg)); 1837da112707SJunchao Zhang PetscCheck(flg,PetscObjectComm((PetscObject)A),PETSC_ERR_GPU,"Expected MATSEQAIJCUSPARSE, but input is %s",((PetscObject)A)->type_name); 1838da112707SJunchao Zhang PetscCheck(A->rmap->n == A->cmap->n,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Must be square matrix, rows %" PetscInt_FMT " columns %" PetscInt_FMT,A->rmap->n,A->cmap->n); 1839da112707SJunchao Zhang PetscCall(MatMissingDiagonal(A,&missing,&i)); 1840da112707SJunchao Zhang PetscCheck(!missing,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Matrix is missing diagonal entry %" PetscInt_FMT,i); 1841da112707SJunchao Zhang } 1842da112707SJunchao Zhang 1843da112707SJunchao Zhang /* Free the old stale stuff */ 1844da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSETriFactors_Reset(&fs)); 1845da112707SJunchao Zhang 1846da112707SJunchao Zhang /* Copy over A's meta data to fact. Note that we also allocated fact's i,j,a on host, 1847da112707SJunchao Zhang but they will not be used. Allocate them just for easy debugging. 1848da112707SJunchao Zhang */ 1849da112707SJunchao Zhang PetscCall(MatDuplicateNoCreate_SeqAIJ(fact,A,MAT_DO_NOT_COPY_VALUES,PETSC_TRUE/*malloc*/)); 1850da112707SJunchao Zhang 1851da112707SJunchao Zhang fact->offloadmask = PETSC_OFFLOAD_BOTH; 1852da112707SJunchao Zhang fact->factortype = MAT_FACTOR_ILU; 1853da112707SJunchao Zhang fact->info.factor_mallocs = 0; 1854da112707SJunchao Zhang fact->info.fill_ratio_given = info->fill; 1855da112707SJunchao Zhang fact->info.fill_ratio_needed = 1.0; 1856da112707SJunchao Zhang 1857da112707SJunchao Zhang aij->row = NULL; 1858da112707SJunchao Zhang aij->col = NULL; 1859da112707SJunchao Zhang 1860da112707SJunchao Zhang /* ====================================================================== */ 1861da112707SJunchao Zhang /* Copy A's i, j to fact and also allocate the value array of fact. */ 1862da112707SJunchao Zhang /* We'll do in-place factorization on fact */ 1863da112707SJunchao Zhang /* ====================================================================== */ 1864da112707SJunchao Zhang const int *Ai,*Aj; 1865da112707SJunchao Zhang 1866da112707SJunchao Zhang m = fact->rmap->n; 1867da112707SJunchao Zhang nz = aij->nz; 1868da112707SJunchao Zhang 1869da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void**)&fs->csrRowPtr,sizeof(int)*(m+1))); 1870da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void**)&fs->csrColIdx,sizeof(int)*nz)); 1871da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void**)&fs->csrVal,sizeof(PetscScalar)*nz)); 1872da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSEGetIJ(A,PETSC_FALSE,&Ai,&Aj)); /* Do not use compressed Ai */ 1873da112707SJunchao Zhang PetscCallCUDA(cudaMemcpyAsync(fs->csrRowPtr,Ai,sizeof(int)*(m+1),cudaMemcpyDeviceToDevice,PetscDefaultCudaStream)); 1874da112707SJunchao Zhang PetscCallCUDA(cudaMemcpyAsync(fs->csrColIdx,Aj,sizeof(int)*nz,cudaMemcpyDeviceToDevice,PetscDefaultCudaStream)); 1875da112707SJunchao Zhang 1876da112707SJunchao Zhang /* ====================================================================== */ 1877da112707SJunchao Zhang /* Create descriptors for M, L, U */ 1878da112707SJunchao Zhang /* ====================================================================== */ 1879da112707SJunchao Zhang cusparseFillMode_t fillMode; 1880da112707SJunchao Zhang cusparseDiagType_t diagType; 1881da112707SJunchao Zhang 1882da112707SJunchao Zhang PetscCallCUSPARSE(cusparseCreateMatDescr(&fs->matDescr_M)); 1883da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSetMatIndexBase(fs->matDescr_M, CUSPARSE_INDEX_BASE_ZERO)); 1884da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSetMatType(fs->matDescr_M, CUSPARSE_MATRIX_TYPE_GENERAL)); 1885da112707SJunchao Zhang 1886da112707SJunchao Zhang /* https://docs.nvidia.com/cuda/cusparse/index.html#cusparseDiagType_t 1887da112707SJunchao Zhang cusparseDiagType_t: This type indicates if the matrix diagonal entries are unity. The diagonal elements are always 1888da112707SJunchao Zhang assumed to be present, but if CUSPARSE_DIAG_TYPE_UNIT is passed to an API routine, then the routine assumes that 1889da112707SJunchao Zhang all diagonal entries are unity and will not read or modify those entries. Note that in this case the routine 1890da112707SJunchao Zhang assumes the diagonal entries are equal to one, regardless of what those entries are actually set to in memory. 1891da112707SJunchao Zhang */ 1892da112707SJunchao Zhang fillMode = CUSPARSE_FILL_MODE_LOWER; 1893da112707SJunchao Zhang diagType = CUSPARSE_DIAG_TYPE_UNIT; 1894da112707SJunchao Zhang PetscCallCUSPARSE(cusparseCreateCsr(&fs->spMatDescr_L,m,m,nz, 1895da112707SJunchao Zhang fs->csrRowPtr, 1896da112707SJunchao Zhang fs->csrColIdx, 1897da112707SJunchao Zhang fs->csrVal, 1898da112707SJunchao Zhang CUSPARSE_INDEX_32I, 1899da112707SJunchao Zhang CUSPARSE_INDEX_32I, 1900da112707SJunchao Zhang CUSPARSE_INDEX_BASE_ZERO, 1901da112707SJunchao Zhang cusparse_scalartype)); 1902da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpMatSetAttribute(fs->spMatDescr_L, 1903da112707SJunchao Zhang CUSPARSE_SPMAT_FILL_MODE, 1904da112707SJunchao Zhang &fillMode, 1905da112707SJunchao Zhang sizeof(fillMode))); 1906da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpMatSetAttribute(fs->spMatDescr_L, 1907da112707SJunchao Zhang CUSPARSE_SPMAT_DIAG_TYPE, 1908da112707SJunchao Zhang &diagType, 1909da112707SJunchao Zhang sizeof(diagType))); 1910da112707SJunchao Zhang 1911da112707SJunchao Zhang fillMode = CUSPARSE_FILL_MODE_UPPER; 1912da112707SJunchao Zhang diagType = CUSPARSE_DIAG_TYPE_NON_UNIT; 1913da112707SJunchao Zhang PetscCallCUSPARSE(cusparseCreateCsr(&fs->spMatDescr_U,m,m,nz, 1914da112707SJunchao Zhang fs->csrRowPtr, 1915da112707SJunchao Zhang fs->csrColIdx, 1916da112707SJunchao Zhang fs->csrVal, 1917da112707SJunchao Zhang CUSPARSE_INDEX_32I, 1918da112707SJunchao Zhang CUSPARSE_INDEX_32I, 1919da112707SJunchao Zhang CUSPARSE_INDEX_BASE_ZERO, 1920da112707SJunchao Zhang cusparse_scalartype)); 1921da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpMatSetAttribute(fs->spMatDescr_U, 1922da112707SJunchao Zhang CUSPARSE_SPMAT_FILL_MODE, 1923da112707SJunchao Zhang &fillMode, 1924da112707SJunchao Zhang sizeof(fillMode))); 1925da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpMatSetAttribute(fs->spMatDescr_U, 1926da112707SJunchao Zhang CUSPARSE_SPMAT_DIAG_TYPE, 1927da112707SJunchao Zhang &diagType, 1928da112707SJunchao Zhang sizeof(diagType))); 1929da112707SJunchao Zhang 1930da112707SJunchao Zhang /* ========================================================================= */ 1931da112707SJunchao Zhang /* Query buffer sizes for csrilu0, SpSV and allocate buffers */ 1932da112707SJunchao Zhang /* ========================================================================= */ 1933da112707SJunchao Zhang PetscCallCUSPARSE(cusparseCreateCsrilu02Info(&fs->ilu0Info_M)); 1934da112707SJunchao Zhang if (m) PetscCallCUSPARSE(cusparseXcsrilu02_bufferSize(fs->handle, m, nz, /* cusparseXcsrilu02 errors out with empty matrices (m=0) */ 1935da112707SJunchao Zhang fs->matDescr_M, 1936da112707SJunchao Zhang fs->csrVal, 1937da112707SJunchao Zhang fs->csrRowPtr, 1938da112707SJunchao Zhang fs->csrColIdx, 1939da112707SJunchao Zhang fs->ilu0Info_M, 1940da112707SJunchao Zhang &fs->factBufferSize_M)); 1941da112707SJunchao Zhang 1942da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void**)&fs->X,sizeof(PetscScalar)*m)); 1943da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void**)&fs->Y,sizeof(PetscScalar)*m)); 1944da112707SJunchao Zhang 1945da112707SJunchao Zhang PetscCallCUSPARSE(cusparseCreateDnVec(&fs->dnVecDescr_X,m,fs->X,cusparse_scalartype)); 1946da112707SJunchao Zhang PetscCallCUSPARSE(cusparseCreateDnVec(&fs->dnVecDescr_Y,m,fs->Y,cusparse_scalartype)); 1947da112707SJunchao Zhang 1948da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_createDescr(&fs->spsvDescr_L)); 1949da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_bufferSize(fs->handle, 1950da112707SJunchao Zhang CUSPARSE_OPERATION_NON_TRANSPOSE, 1951da112707SJunchao Zhang &PETSC_CUSPARSE_ONE, 1952da112707SJunchao Zhang fs->spMatDescr_L, 1953da112707SJunchao Zhang fs->dnVecDescr_X, 1954da112707SJunchao Zhang fs->dnVecDescr_Y, 1955da112707SJunchao Zhang cusparse_scalartype, 1956da112707SJunchao Zhang CUSPARSE_SPSV_ALG_DEFAULT, 1957da112707SJunchao Zhang fs->spsvDescr_L, 1958da112707SJunchao Zhang &fs->spsvBufferSize_L)); 1959da112707SJunchao Zhang 1960da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_createDescr(&fs->spsvDescr_U)); 1961da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_bufferSize(fs->handle, 1962da112707SJunchao Zhang CUSPARSE_OPERATION_NON_TRANSPOSE, 1963da112707SJunchao Zhang &PETSC_CUSPARSE_ONE, 1964da112707SJunchao Zhang fs->spMatDescr_U, 1965da112707SJunchao Zhang fs->dnVecDescr_X, 1966da112707SJunchao Zhang fs->dnVecDescr_Y, 1967da112707SJunchao Zhang cusparse_scalartype, 1968da112707SJunchao Zhang CUSPARSE_SPSV_ALG_DEFAULT, 1969da112707SJunchao Zhang fs->spsvDescr_U, 1970da112707SJunchao Zhang &fs->spsvBufferSize_U)); 1971da112707SJunchao Zhang 1972da112707SJunchao Zhang /* From my experiment with the example at https://github.com/NVIDIA/CUDALibrarySamples/tree/master/cuSPARSE/bicgstab, 1973da112707SJunchao Zhang spsvBuffer_L and spsvBuffer_U can not be shared. 1974da112707SJunchao Zhang */ 1975da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void**)&fs->spsvBuffer_U,fs->spsvBufferSize_U)); 1976da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void**)&fs->spsvBuffer_L,fs->spsvBufferSize_L)); 1977da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void**)&fs->factBuffer_M,fs->factBufferSize_M)); 1978da112707SJunchao Zhang 1979da112707SJunchao Zhang /* ========================================================================== */ 1980da112707SJunchao Zhang /* Perform analysis of ilu0 on M, SpSv on L and U */ 1981da112707SJunchao Zhang /* The lower(upper) triangular part of M has the same sparsity pattern as L(U)*/ 1982da112707SJunchao Zhang /* ========================================================================== */ 1983da112707SJunchao Zhang int structural_zero; 1984da112707SJunchao Zhang cusparseStatus_t status; 1985da112707SJunchao Zhang 1986da112707SJunchao Zhang fs->policy_M = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 1987da112707SJunchao Zhang if (m) PetscCallCUSPARSE(cusparseXcsrilu02_analysis(fs->handle, m, nz, /* cusparseXcsrilu02 errors out with empty matrices (m=0) */ 1988da112707SJunchao Zhang fs->matDescr_M, 1989da112707SJunchao Zhang fs->csrVal, 1990da112707SJunchao Zhang fs->csrRowPtr, 1991da112707SJunchao Zhang fs->csrColIdx, 1992da112707SJunchao Zhang fs->ilu0Info_M, 1993da112707SJunchao Zhang fs->policy_M, 1994da112707SJunchao Zhang fs->factBuffer_M)); 1995da112707SJunchao Zhang if (PetscDefined(USE_DEBUG)) { 1996da112707SJunchao Zhang /* Function cusparseXcsrilu02_zeroPivot() is a blocking call. It calls cudaDeviceSynchronize() to make sure all previous kernels are done. */ 1997da112707SJunchao Zhang status = cusparseXcsrilu02_zeroPivot(fs->handle, fs->ilu0Info_M, &structural_zero); 1998da112707SJunchao Zhang PetscCheck(CUSPARSE_STATUS_ZERO_PIVOT != status,PETSC_COMM_SELF,PETSC_ERR_USER_INPUT,"Structural zero pivot detected in csrilu02: A(%d,%d) is missing",structural_zero,structural_zero); 1999da112707SJunchao Zhang } 2000da112707SJunchao Zhang 2001da112707SJunchao Zhang /* Estimate FLOPs of the numeric factorization */ 2002*0dd8c0acSJunchao Zhang { 2003da112707SJunchao Zhang Mat_SeqAIJ *Aseq = (Mat_SeqAIJ*)A->data; 2004*0dd8c0acSJunchao Zhang PetscInt *Ai,*Adiag,nzRow,nzLeft; 2005da112707SJunchao Zhang PetscLogDouble flops = 0.0; 2006da112707SJunchao Zhang 2007da112707SJunchao Zhang PetscCall(MatMarkDiagonal_SeqAIJ(A)); 2008da112707SJunchao Zhang Ai = Aseq->i; 2009da112707SJunchao Zhang Adiag = Aseq->diag; 2010da112707SJunchao Zhang for (PetscInt i=0; i<m; i++) { 2011da112707SJunchao Zhang if (Ai[i] < Adiag[i] && Adiag[i] < Ai[i+1]) { /* There are nonzeros left to the diagonal of row i */ 2012da112707SJunchao Zhang nzRow = Ai[i+1] - Ai[i]; 2013da112707SJunchao Zhang nzLeft = Adiag[i] - Ai[i]; 2014da112707SJunchao Zhang /* We want to eliminate nonzeros left to the diagonal one by one. Assume each time, nonzeros right 2015da112707SJunchao Zhang and include the eliminated one will be updated, which incurs a multiplication and an addition. 2016da112707SJunchao Zhang */ 2017da112707SJunchao Zhang nzLeft = (nzRow-1)/2; 2018da112707SJunchao Zhang flops += nzLeft*(2.0*nzRow-nzLeft+1); 2019da112707SJunchao Zhang } 2020da112707SJunchao Zhang } 2021da112707SJunchao Zhang fs->numericFactFlops = flops; 2022*0dd8c0acSJunchao Zhang } 2023da112707SJunchao Zhang fact->ops->lufactornumeric = MatILUFactorNumeric_SeqAIJCUSPARSE_ILU0; 2024da112707SJunchao Zhang PetscFunctionReturn(0); 2025da112707SJunchao Zhang } 2026da112707SJunchao Zhang 2027da112707SJunchao Zhang static PetscErrorCode MatSolve_SeqAIJCUSPARSE_ICC0(Mat fact,Vec b,Vec x) 2028da112707SJunchao Zhang { 2029da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *fs = (Mat_SeqAIJCUSPARSETriFactors*)fact->spptr; 2030da112707SJunchao Zhang Mat_SeqAIJ *aij = (Mat_SeqAIJ*)fact->data; 2031da112707SJunchao Zhang const PetscScalar *barray; 2032da112707SJunchao Zhang PetscScalar *xarray; 2033da112707SJunchao Zhang 2034da112707SJunchao Zhang PetscFunctionBegin; 2035da112707SJunchao Zhang PetscCall(VecCUDAGetArrayWrite(x,&xarray)); 2036da112707SJunchao Zhang PetscCall(VecCUDAGetArrayRead(b,&barray)); 2037da112707SJunchao Zhang PetscCall(PetscLogGpuTimeBegin()); 2038da112707SJunchao Zhang 2039da112707SJunchao Zhang /* Solve L*y = b */ 2040da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDnVecSetValues(fs->dnVecDescr_X,(void*)barray)); 2041da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDnVecSetValues(fs->dnVecDescr_Y,fs->Y)); 2042da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_solve(fs->handle, 2043da112707SJunchao Zhang CUSPARSE_OPERATION_NON_TRANSPOSE, 2044da112707SJunchao Zhang &PETSC_CUSPARSE_ONE, 2045da112707SJunchao Zhang fs->spMatDescr_L, /* L Y = X */ 2046da112707SJunchao Zhang fs->dnVecDescr_X, 2047da112707SJunchao Zhang fs->dnVecDescr_Y, 2048da112707SJunchao Zhang cusparse_scalartype, 2049da112707SJunchao Zhang CUSPARSE_SPSV_ALG_DEFAULT, 2050da112707SJunchao Zhang fs->spsvDescr_L)); 2051da112707SJunchao Zhang 2052da112707SJunchao Zhang /* Solve Lt*x = y */ 2053da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDnVecSetValues(fs->dnVecDescr_X,xarray)); 2054da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_solve(fs->handle, 2055da112707SJunchao Zhang CUSPARSE_OPERATION_TRANSPOSE, 2056da112707SJunchao Zhang &PETSC_CUSPARSE_ONE, 2057da112707SJunchao Zhang fs->spMatDescr_L, /* Lt X = Y */ 2058da112707SJunchao Zhang fs->dnVecDescr_Y, 2059da112707SJunchao Zhang fs->dnVecDescr_X, 2060da112707SJunchao Zhang cusparse_scalartype, 2061da112707SJunchao Zhang CUSPARSE_SPSV_ALG_DEFAULT, 2062da112707SJunchao Zhang fs->spsvDescr_Lt)); 2063da112707SJunchao Zhang 2064da112707SJunchao Zhang PetscCall(VecCUDARestoreArrayRead(b,&barray)); 2065da112707SJunchao Zhang PetscCall(VecCUDARestoreArrayWrite(x,&xarray)); 2066da112707SJunchao Zhang 2067da112707SJunchao Zhang PetscCall(PetscLogGpuTimeEnd()); 2068da112707SJunchao Zhang PetscCall(PetscLogGpuFlops(2.0*aij->nz - fact->rmap->n)); 2069da112707SJunchao Zhang PetscFunctionReturn(0); 2070da112707SJunchao Zhang } 2071da112707SJunchao Zhang 2072da112707SJunchao Zhang static PetscErrorCode MatICCFactorNumeric_SeqAIJCUSPARSE_ICC0(Mat fact,Mat A,const MatFactorInfo *info) 2073da112707SJunchao Zhang { 2074da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *fs = (Mat_SeqAIJCUSPARSETriFactors*)fact->spptr; 2075da112707SJunchao Zhang Mat_SeqAIJ *aij = (Mat_SeqAIJ*)fact->data; 2076da112707SJunchao Zhang Mat_SeqAIJCUSPARSE *Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2077da112707SJunchao Zhang CsrMatrix *Acsr; 2078da112707SJunchao Zhang PetscInt m,nz; 2079da112707SJunchao Zhang PetscBool flg; 2080da112707SJunchao Zhang 2081da112707SJunchao Zhang PetscFunctionBegin; 2082da112707SJunchao Zhang if (PetscDefined(USE_DEBUG)) { 2083da112707SJunchao Zhang PetscCall(PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg)); 2084da112707SJunchao Zhang PetscCheck(flg,PetscObjectComm((PetscObject)A),PETSC_ERR_GPU,"Expected MATSEQAIJCUSPARSE, but input is %s",((PetscObject)A)->type_name); 2085da112707SJunchao Zhang } 2086da112707SJunchao Zhang 2087da112707SJunchao Zhang /* Copy A's value to fact */ 2088da112707SJunchao Zhang m = fact->rmap->n; 2089da112707SJunchao Zhang nz = aij->nz; 2090da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 2091da112707SJunchao Zhang Acsr = (CsrMatrix*)Acusp->mat->mat; 2092da112707SJunchao Zhang PetscCallCUDA(cudaMemcpyAsync(fs->csrVal,Acsr->values->data().get(),sizeof(PetscScalar)*nz,cudaMemcpyDeviceToDevice,PetscDefaultCudaStream)); 2093da112707SJunchao Zhang 2094da112707SJunchao Zhang /* Factorize fact inplace */ 2095da112707SJunchao Zhang /* https://docs.nvidia.com/cuda/cusparse/index.html#csric02_solve 2096da112707SJunchao Zhang Function csric02() only takes the lower triangular part of matrix A to perform factorization. 2097da112707SJunchao Zhang The matrix type must be CUSPARSE_MATRIX_TYPE_GENERAL, the fill mode and diagonal type are ignored, 2098da112707SJunchao Zhang and the strictly upper triangular part is ignored and never touched. It does not matter if A is Hermitian or not. 2099da112707SJunchao Zhang In other words, from the point of view of csric02() A is Hermitian and only the lower triangular part is provided. 2100da112707SJunchao Zhang */ 2101da112707SJunchao Zhang if (m) PetscCallCUSPARSE(cusparseXcsric02(fs->handle, m, nz, 2102da112707SJunchao Zhang fs->matDescr_M, 2103da112707SJunchao Zhang fs->csrVal, 2104da112707SJunchao Zhang fs->csrRowPtr, 2105da112707SJunchao Zhang fs->csrColIdx, 2106da112707SJunchao Zhang fs->ic0Info_M, 2107da112707SJunchao Zhang fs->policy_M, 2108da112707SJunchao Zhang fs->factBuffer_M)); 2109da112707SJunchao Zhang if (PetscDefined(USE_DEBUG)) { 2110da112707SJunchao Zhang int numerical_zero; 2111da112707SJunchao Zhang cusparseStatus_t status; 2112da112707SJunchao Zhang status = cusparseXcsric02_zeroPivot(fs->handle, fs->ic0Info_M, &numerical_zero); 2113da112707SJunchao Zhang PetscAssert(CUSPARSE_STATUS_ZERO_PIVOT != status,PETSC_COMM_SELF,PETSC_ERR_USER_INPUT,"Numerical zero pivot detected in csric02: A(%d,%d) is zero",numerical_zero,numerical_zero); 2114da112707SJunchao Zhang } 2115da112707SJunchao Zhang 2116da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_analysis(fs->handle, 2117da112707SJunchao Zhang CUSPARSE_OPERATION_NON_TRANSPOSE, 2118da112707SJunchao Zhang &PETSC_CUSPARSE_ONE, 2119da112707SJunchao Zhang fs->spMatDescr_L, 2120da112707SJunchao Zhang fs->dnVecDescr_X, 2121da112707SJunchao Zhang fs->dnVecDescr_Y, 2122da112707SJunchao Zhang cusparse_scalartype, 2123da112707SJunchao Zhang CUSPARSE_SPSV_ALG_DEFAULT, 2124da112707SJunchao Zhang fs->spsvDescr_L, 2125da112707SJunchao Zhang fs->spsvBuffer_L)); 2126da112707SJunchao Zhang 2127da112707SJunchao Zhang /* Note that cusparse reports this error if we use double and CUSPARSE_OPERATION_CONJUGATE_TRANSPOSE 2128da112707SJunchao Zhang ** On entry to cusparseSpSV_analysis(): conjugate transpose (opA) is not supported for matA data type, current -> CUDA_R_64F 2129da112707SJunchao Zhang */ 2130da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_analysis(fs->handle, 2131da112707SJunchao Zhang CUSPARSE_OPERATION_TRANSPOSE, 2132da112707SJunchao Zhang &PETSC_CUSPARSE_ONE, 2133da112707SJunchao Zhang fs->spMatDescr_L, 2134da112707SJunchao Zhang fs->dnVecDescr_X, 2135da112707SJunchao Zhang fs->dnVecDescr_Y, 2136da112707SJunchao Zhang cusparse_scalartype, 2137da112707SJunchao Zhang CUSPARSE_SPSV_ALG_DEFAULT, 2138da112707SJunchao Zhang fs->spsvDescr_Lt, 2139da112707SJunchao Zhang fs->spsvBuffer_Lt)); 2140da112707SJunchao Zhang 2141da112707SJunchao Zhang fact->offloadmask = PETSC_OFFLOAD_GPU; 2142da112707SJunchao Zhang fact->ops->solve = MatSolve_SeqAIJCUSPARSE_ICC0; 2143da112707SJunchao Zhang fact->ops->solvetranspose = MatSolve_SeqAIJCUSPARSE_ICC0; 2144da112707SJunchao Zhang fact->ops->matsolve = NULL; 2145da112707SJunchao Zhang fact->ops->matsolvetranspose = NULL; 2146da112707SJunchao Zhang PetscCall(PetscLogGpuFlops(fs->numericFactFlops)); 2147da112707SJunchao Zhang PetscFunctionReturn(0); 2148da112707SJunchao Zhang } 2149da112707SJunchao Zhang 2150da112707SJunchao Zhang static PetscErrorCode MatICCFactorSymbolic_SeqAIJCUSPARSE_ICC0(Mat fact,Mat A,IS perm,const MatFactorInfo *info) 2151da112707SJunchao Zhang { 2152da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *fs = (Mat_SeqAIJCUSPARSETriFactors*)fact->spptr; 2153da112707SJunchao Zhang Mat_SeqAIJ *aij = (Mat_SeqAIJ*)fact->data; 2154da112707SJunchao Zhang PetscInt m,nz; 2155da112707SJunchao Zhang 2156da112707SJunchao Zhang PetscFunctionBegin; 2157da112707SJunchao Zhang if (PetscDefined(USE_DEBUG)) { 2158da112707SJunchao Zhang PetscInt i; 2159da112707SJunchao Zhang PetscBool flg,missing; 2160da112707SJunchao Zhang 2161da112707SJunchao Zhang PetscCall(PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg)); 2162da112707SJunchao Zhang PetscCheck(flg,PetscObjectComm((PetscObject)A),PETSC_ERR_GPU,"Expected MATSEQAIJCUSPARSE, but input is %s",((PetscObject)A)->type_name); 2163da112707SJunchao Zhang PetscCheck(A->rmap->n == A->cmap->n,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Must be square matrix, rows %" PetscInt_FMT " columns %" PetscInt_FMT,A->rmap->n,A->cmap->n); 2164da112707SJunchao Zhang PetscCall(MatMissingDiagonal(A,&missing,&i)); 2165da112707SJunchao Zhang PetscCheck(!missing,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Matrix is missing diagonal entry %" PetscInt_FMT,i); 2166da112707SJunchao Zhang } 2167da112707SJunchao Zhang 2168da112707SJunchao Zhang /* Free the old stale stuff */ 2169da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSETriFactors_Reset(&fs)); 2170da112707SJunchao Zhang 2171da112707SJunchao Zhang /* Copy over A's meta data to fact. Note that we also allocated fact's i,j,a on host, 2172da112707SJunchao Zhang but they will not be used. Allocate them just for easy debugging. 2173da112707SJunchao Zhang */ 2174da112707SJunchao Zhang PetscCall(MatDuplicateNoCreate_SeqAIJ(fact,A,MAT_DO_NOT_COPY_VALUES,PETSC_TRUE/*malloc*/)); 2175da112707SJunchao Zhang 2176da112707SJunchao Zhang fact->offloadmask = PETSC_OFFLOAD_BOTH; 2177da112707SJunchao Zhang fact->factortype = MAT_FACTOR_ICC; 2178da112707SJunchao Zhang fact->info.factor_mallocs = 0; 2179da112707SJunchao Zhang fact->info.fill_ratio_given = info->fill; 2180da112707SJunchao Zhang fact->info.fill_ratio_needed = 1.0; 2181da112707SJunchao Zhang 2182da112707SJunchao Zhang aij->row = NULL; 2183da112707SJunchao Zhang aij->col = NULL; 2184da112707SJunchao Zhang 2185da112707SJunchao Zhang /* ====================================================================== */ 2186da112707SJunchao Zhang /* Copy A's i, j to fact and also allocate the value array of fact. */ 2187da112707SJunchao Zhang /* We'll do in-place factorization on fact */ 2188da112707SJunchao Zhang /* ====================================================================== */ 2189da112707SJunchao Zhang const int *Ai,*Aj; 2190da112707SJunchao Zhang 2191da112707SJunchao Zhang m = fact->rmap->n; 2192da112707SJunchao Zhang nz = aij->nz; 2193da112707SJunchao Zhang 2194da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void**)&fs->csrRowPtr,sizeof(int)*(m+1))); 2195da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void**)&fs->csrColIdx,sizeof(int)*nz)); 2196da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void**)&fs->csrVal,sizeof(PetscScalar)*nz)); 2197da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSEGetIJ(A,PETSC_FALSE,&Ai,&Aj)); /* Do not use compressed Ai */ 2198da112707SJunchao Zhang PetscCallCUDA(cudaMemcpyAsync(fs->csrRowPtr,Ai,sizeof(int)*(m+1),cudaMemcpyDeviceToDevice,PetscDefaultCudaStream)); 2199da112707SJunchao Zhang PetscCallCUDA(cudaMemcpyAsync(fs->csrColIdx,Aj,sizeof(int)*nz,cudaMemcpyDeviceToDevice,PetscDefaultCudaStream)); 2200da112707SJunchao Zhang 2201da112707SJunchao Zhang /* ====================================================================== */ 2202da112707SJunchao Zhang /* Create mat descriptors for M, L */ 2203da112707SJunchao Zhang /* ====================================================================== */ 2204da112707SJunchao Zhang cusparseFillMode_t fillMode; 2205da112707SJunchao Zhang cusparseDiagType_t diagType; 2206da112707SJunchao Zhang 2207da112707SJunchao Zhang PetscCallCUSPARSE(cusparseCreateMatDescr(&fs->matDescr_M)); 2208da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSetMatIndexBase(fs->matDescr_M, CUSPARSE_INDEX_BASE_ZERO)); 2209da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSetMatType(fs->matDescr_M, CUSPARSE_MATRIX_TYPE_GENERAL)); 2210da112707SJunchao Zhang 2211da112707SJunchao Zhang /* https://docs.nvidia.com/cuda/cusparse/index.html#cusparseDiagType_t 2212da112707SJunchao Zhang cusparseDiagType_t: This type indicates if the matrix diagonal entries are unity. The diagonal elements are always 2213da112707SJunchao Zhang assumed to be present, but if CUSPARSE_DIAG_TYPE_UNIT is passed to an API routine, then the routine assumes that 2214da112707SJunchao Zhang all diagonal entries are unity and will not read or modify those entries. Note that in this case the routine 2215da112707SJunchao Zhang assumes the diagonal entries are equal to one, regardless of what those entries are actually set to in memory. 2216da112707SJunchao Zhang */ 2217da112707SJunchao Zhang fillMode = CUSPARSE_FILL_MODE_LOWER; 2218da112707SJunchao Zhang diagType = CUSPARSE_DIAG_TYPE_NON_UNIT; 2219da112707SJunchao Zhang PetscCallCUSPARSE(cusparseCreateCsr(&fs->spMatDescr_L,m,m,nz, 2220da112707SJunchao Zhang fs->csrRowPtr, 2221da112707SJunchao Zhang fs->csrColIdx, 2222da112707SJunchao Zhang fs->csrVal, 2223da112707SJunchao Zhang CUSPARSE_INDEX_32I, 2224da112707SJunchao Zhang CUSPARSE_INDEX_32I, 2225da112707SJunchao Zhang CUSPARSE_INDEX_BASE_ZERO, 2226da112707SJunchao Zhang cusparse_scalartype)); 2227da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpMatSetAttribute(fs->spMatDescr_L, 2228da112707SJunchao Zhang CUSPARSE_SPMAT_FILL_MODE, 2229da112707SJunchao Zhang &fillMode, 2230da112707SJunchao Zhang sizeof(fillMode))); 2231da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpMatSetAttribute(fs->spMatDescr_L, 2232da112707SJunchao Zhang CUSPARSE_SPMAT_DIAG_TYPE, 2233da112707SJunchao Zhang &diagType, 2234da112707SJunchao Zhang sizeof(diagType))); 2235da112707SJunchao Zhang 2236da112707SJunchao Zhang /* ========================================================================= */ 2237da112707SJunchao Zhang /* Query buffer sizes for csric0, SpSV of L and Lt, and allocate buffers */ 2238da112707SJunchao Zhang /* ========================================================================= */ 2239da112707SJunchao Zhang PetscCallCUSPARSE(cusparseCreateCsric02Info(&fs->ic0Info_M)); 2240da112707SJunchao Zhang if (m) PetscCallCUSPARSE(cusparseXcsric02_bufferSize(fs->handle, m, nz, 2241da112707SJunchao Zhang fs->matDescr_M, 2242da112707SJunchao Zhang fs->csrVal, 2243da112707SJunchao Zhang fs->csrRowPtr, 2244da112707SJunchao Zhang fs->csrColIdx, 2245da112707SJunchao Zhang fs->ic0Info_M, 2246da112707SJunchao Zhang &fs->factBufferSize_M)); 2247da112707SJunchao Zhang 2248da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void**)&fs->X,sizeof(PetscScalar)*m)); 2249da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void**)&fs->Y,sizeof(PetscScalar)*m)); 2250da112707SJunchao Zhang 2251da112707SJunchao Zhang PetscCallCUSPARSE(cusparseCreateDnVec(&fs->dnVecDescr_X,m,fs->X,cusparse_scalartype)); 2252da112707SJunchao Zhang PetscCallCUSPARSE(cusparseCreateDnVec(&fs->dnVecDescr_Y,m,fs->Y,cusparse_scalartype)); 2253da112707SJunchao Zhang 2254da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_createDescr(&fs->spsvDescr_L)); 2255da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_bufferSize(fs->handle, 2256da112707SJunchao Zhang CUSPARSE_OPERATION_NON_TRANSPOSE, 2257da112707SJunchao Zhang &PETSC_CUSPARSE_ONE, 2258da112707SJunchao Zhang fs->spMatDescr_L, 2259da112707SJunchao Zhang fs->dnVecDescr_X, 2260da112707SJunchao Zhang fs->dnVecDescr_Y, 2261da112707SJunchao Zhang cusparse_scalartype, 2262da112707SJunchao Zhang CUSPARSE_SPSV_ALG_DEFAULT, 2263da112707SJunchao Zhang fs->spsvDescr_L, 2264da112707SJunchao Zhang &fs->spsvBufferSize_L)); 2265da112707SJunchao Zhang 2266da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_createDescr(&fs->spsvDescr_Lt)); 2267da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_bufferSize(fs->handle, 2268da112707SJunchao Zhang CUSPARSE_OPERATION_TRANSPOSE, 2269da112707SJunchao Zhang &PETSC_CUSPARSE_ONE, 2270da112707SJunchao Zhang fs->spMatDescr_L, 2271da112707SJunchao Zhang fs->dnVecDescr_X, 2272da112707SJunchao Zhang fs->dnVecDescr_Y, 2273da112707SJunchao Zhang cusparse_scalartype, 2274da112707SJunchao Zhang CUSPARSE_SPSV_ALG_DEFAULT, 2275da112707SJunchao Zhang fs->spsvDescr_Lt, 2276da112707SJunchao Zhang &fs->spsvBufferSize_Lt)); 2277da112707SJunchao Zhang 2278da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void**)&fs->factBuffer_M,fs->factBufferSize_M)); 2279da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void**)&fs->spsvBuffer_L,fs->spsvBufferSize_L)); 2280da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void**)&fs->spsvBuffer_Lt,fs->spsvBufferSize_Lt)); 2281da112707SJunchao Zhang 2282da112707SJunchao Zhang /* ========================================================================== */ 2283da112707SJunchao Zhang /* Perform analysis of ic0 on M */ 2284da112707SJunchao Zhang /* The lower triangular part of M has the same sparsity pattern as L */ 2285da112707SJunchao Zhang /* ========================================================================== */ 2286da112707SJunchao Zhang int structural_zero; 2287da112707SJunchao Zhang cusparseStatus_t status; 2288da112707SJunchao Zhang 2289da112707SJunchao Zhang fs->policy_M = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 2290da112707SJunchao Zhang if (m) PetscCallCUSPARSE(cusparseXcsric02_analysis(fs->handle, m, nz, 2291da112707SJunchao Zhang fs->matDescr_M, 2292da112707SJunchao Zhang fs->csrVal, 2293da112707SJunchao Zhang fs->csrRowPtr, 2294da112707SJunchao Zhang fs->csrColIdx, 2295da112707SJunchao Zhang fs->ic0Info_M, 2296da112707SJunchao Zhang fs->policy_M, 2297da112707SJunchao Zhang fs->factBuffer_M)); 2298da112707SJunchao Zhang if (PetscDefined(USE_DEBUG)) { 2299da112707SJunchao Zhang /* Function cusparseXcsric02_zeroPivot() is a blocking call. It calls cudaDeviceSynchronize() to make sure all previous kernels are done. */ 2300da112707SJunchao Zhang status = cusparseXcsric02_zeroPivot(fs->handle, fs->ic0Info_M, &structural_zero); 2301da112707SJunchao Zhang PetscCheck(CUSPARSE_STATUS_ZERO_PIVOT != status,PETSC_COMM_SELF,PETSC_ERR_USER_INPUT,"Structural zero pivot detected in csric02: A(%d,%d) is missing",structural_zero,structural_zero); 2302da112707SJunchao Zhang } 2303da112707SJunchao Zhang 2304da112707SJunchao Zhang /* Estimate FLOPs of the numeric factorization */ 2305*0dd8c0acSJunchao Zhang { 2306da112707SJunchao Zhang Mat_SeqAIJ *Aseq = (Mat_SeqAIJ*)A->data; 2307*0dd8c0acSJunchao Zhang PetscInt *Ai,nzRow,nzLeft; 2308da112707SJunchao Zhang PetscLogDouble flops = 0.0; 2309da112707SJunchao Zhang 2310da112707SJunchao Zhang Ai = Aseq->i; 2311da112707SJunchao Zhang for (PetscInt i=0; i<m; i++) { 2312da112707SJunchao Zhang nzRow = Ai[i+1] - Ai[i]; 2313da112707SJunchao Zhang if (nzRow > 1) { 2314da112707SJunchao Zhang /* We want to eliminate nonzeros left to the diagonal one by one. Assume each time, nonzeros right 2315da112707SJunchao Zhang and include the eliminated one will be updated, which incurs a multiplication and an addition. 2316da112707SJunchao Zhang */ 2317da112707SJunchao Zhang nzLeft = (nzRow-1)/2; 2318da112707SJunchao Zhang flops += nzLeft*(2.0*nzRow-nzLeft+1); 2319da112707SJunchao Zhang } 2320da112707SJunchao Zhang } 2321da112707SJunchao Zhang fs->numericFactFlops = flops; 2322*0dd8c0acSJunchao Zhang } 2323da112707SJunchao Zhang fact->ops->choleskyfactornumeric = MatICCFactorNumeric_SeqAIJCUSPARSE_ICC0; 2324da112707SJunchao Zhang PetscFunctionReturn(0); 2325da112707SJunchao Zhang } 2326da112707SJunchao Zhang #endif 2327da112707SJunchao Zhang 2328da112707SJunchao Zhang static PetscErrorCode MatILUFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS isrow,IS iscol,const MatFactorInfo *info) 2329da112707SJunchao Zhang { 2330da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 2331da112707SJunchao Zhang 2332da112707SJunchao Zhang PetscFunctionBegin; 2333da112707SJunchao Zhang #if CUSPARSE_VERSION >= 11500 2334da112707SJunchao Zhang PetscBool row_identity,col_identity; 2335da112707SJunchao Zhang PetscCall(ISIdentity(isrow,&row_identity)); 2336da112707SJunchao Zhang PetscCall(ISIdentity(iscol,&col_identity)); 2337da112707SJunchao Zhang if (!info->levels && row_identity && col_identity) { 2338da112707SJunchao Zhang PetscCall(MatILUFactorSymbolic_SeqAIJCUSPARSE_ILU0(B,A,isrow,iscol,info)); 2339da112707SJunchao Zhang } else 2340da112707SJunchao Zhang #endif 2341da112707SJunchao Zhang { 2342da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors)); 2343da112707SJunchao Zhang PetscCall(MatILUFactorSymbolic_SeqAIJ(B,A,isrow,iscol,info)); 2344da112707SJunchao Zhang B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJCUSPARSE; 2345da112707SJunchao Zhang } 2346da112707SJunchao Zhang PetscFunctionReturn(0); 2347da112707SJunchao Zhang } 2348da112707SJunchao Zhang 2349da112707SJunchao Zhang static PetscErrorCode MatLUFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS isrow,IS iscol,const MatFactorInfo *info) 2350da112707SJunchao Zhang { 2351da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 2352da112707SJunchao Zhang 2353da112707SJunchao Zhang PetscFunctionBegin; 2354da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors)); 2355da112707SJunchao Zhang PetscCall(MatLUFactorSymbolic_SeqAIJ(B,A,isrow,iscol,info)); 2356da112707SJunchao Zhang B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJCUSPARSE; 2357da112707SJunchao Zhang PetscFunctionReturn(0); 2358da112707SJunchao Zhang } 2359da112707SJunchao Zhang 2360da112707SJunchao Zhang static PetscErrorCode MatICCFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS perm,const MatFactorInfo *info) 2361da112707SJunchao Zhang { 2362da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 2363da112707SJunchao Zhang 2364da112707SJunchao Zhang PetscFunctionBegin; 2365da112707SJunchao Zhang #if CUSPARSE_VERSION >= 11500 2366da112707SJunchao Zhang PetscBool perm_identity; 2367da112707SJunchao Zhang PetscCall(ISIdentity(perm,&perm_identity)); 2368da112707SJunchao Zhang if (!info->levels && perm_identity) { 2369da112707SJunchao Zhang PetscCall(MatICCFactorSymbolic_SeqAIJCUSPARSE_ICC0(B,A,perm,info)); 2370da112707SJunchao Zhang } else 2371da112707SJunchao Zhang #endif 2372da112707SJunchao Zhang { 2373da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors)); 2374da112707SJunchao Zhang PetscCall(MatICCFactorSymbolic_SeqAIJ(B,A,perm,info)); 2375da112707SJunchao Zhang B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJCUSPARSE; 2376da112707SJunchao Zhang } 2377da112707SJunchao Zhang PetscFunctionReturn(0); 2378da112707SJunchao Zhang } 2379da112707SJunchao Zhang 2380da112707SJunchao Zhang static PetscErrorCode MatCholeskyFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS perm,const MatFactorInfo *info) 2381da112707SJunchao Zhang { 2382da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 2383da112707SJunchao Zhang 2384da112707SJunchao Zhang PetscFunctionBegin; 2385da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors)); 2386da112707SJunchao Zhang PetscCall(MatCholeskyFactorSymbolic_SeqAIJ(B,A,perm,info)); 2387da112707SJunchao Zhang B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJCUSPARSE; 2388da112707SJunchao Zhang PetscFunctionReturn(0); 2389da112707SJunchao Zhang } 2390da112707SJunchao Zhang 2391841d4cb1SJunchao Zhang PetscErrorCode MatFactorGetSolverType_seqaij_cusparse(Mat A,MatSolverType *type) 2392841d4cb1SJunchao Zhang { 2393841d4cb1SJunchao Zhang PetscFunctionBegin; 2394841d4cb1SJunchao Zhang *type = MATSOLVERCUSPARSE; 2395841d4cb1SJunchao Zhang PetscFunctionReturn(0); 2396841d4cb1SJunchao Zhang } 2397841d4cb1SJunchao Zhang 2398841d4cb1SJunchao Zhang /*MC 2399841d4cb1SJunchao Zhang MATSOLVERCUSPARSE = "cusparse" - A matrix type providing triangular solvers for seq matrices 2400841d4cb1SJunchao Zhang on a single GPU of type, seqaijcusparse, aijcusparse, or seqaijcusp, aijcusp. Currently supported 2401841d4cb1SJunchao Zhang algorithms are ILU(k) and ICC(k). Typically, deeper factorizations (larger k) results in poorer 2402841d4cb1SJunchao Zhang performance in the triangular solves. Full LU, and Cholesky decompositions can be solved through the 2403841d4cb1SJunchao Zhang CUSPARSE triangular solve algorithm. However, the performance can be quite poor and thus these 2404841d4cb1SJunchao Zhang algorithms are not recommended. This class does NOT support direct solver operations. 2405841d4cb1SJunchao Zhang 2406841d4cb1SJunchao Zhang Level: beginner 2407841d4cb1SJunchao Zhang 2408841d4cb1SJunchao Zhang .seealso: `PCFactorSetMatSolverType()`, `MatSolverType`, `MatCreateSeqAIJCUSPARSE()`, `MATAIJCUSPARSE`, `MatCreateAIJCUSPARSE()`, `MatCUSPARSESetFormat()`, `MatCUSPARSEStorageFormat`, `MatCUSPARSEFormatOperation` 2409841d4cb1SJunchao Zhang M*/ 2410841d4cb1SJunchao Zhang 2411841d4cb1SJunchao Zhang PETSC_EXTERN PetscErrorCode MatGetFactor_seqaijcusparse_cusparse(Mat A,MatFactorType ftype,Mat *B) 2412841d4cb1SJunchao Zhang { 2413841d4cb1SJunchao Zhang PetscInt n = A->rmap->n; 2414841d4cb1SJunchao Zhang 2415841d4cb1SJunchao Zhang PetscFunctionBegin; 2416841d4cb1SJunchao Zhang PetscCall(MatCreate(PetscObjectComm((PetscObject)A),B)); 2417841d4cb1SJunchao Zhang PetscCall(MatSetSizes(*B,n,n,n,n)); 2418841d4cb1SJunchao Zhang (*B)->factortype = ftype; 2419841d4cb1SJunchao Zhang PetscCall(MatSetType(*B,MATSEQAIJCUSPARSE)); 2420841d4cb1SJunchao Zhang 2421841d4cb1SJunchao Zhang if (A->boundtocpu && A->bindingpropagates) PetscCall(MatBindToCPU(*B,PETSC_TRUE)); 2422841d4cb1SJunchao Zhang if (ftype == MAT_FACTOR_LU || ftype == MAT_FACTOR_ILU || ftype == MAT_FACTOR_ILUDT) { 2423841d4cb1SJunchao Zhang PetscCall(MatSetBlockSizesFromMats(*B,A,A)); 2424841d4cb1SJunchao Zhang if (!A->boundtocpu) { 2425841d4cb1SJunchao Zhang (*B)->ops->ilufactorsymbolic = MatILUFactorSymbolic_SeqAIJCUSPARSE; 2426841d4cb1SJunchao Zhang (*B)->ops->lufactorsymbolic = MatLUFactorSymbolic_SeqAIJCUSPARSE; 2427841d4cb1SJunchao Zhang } else { 2428841d4cb1SJunchao Zhang (*B)->ops->ilufactorsymbolic = MatILUFactorSymbolic_SeqAIJ; 2429841d4cb1SJunchao Zhang (*B)->ops->lufactorsymbolic = MatLUFactorSymbolic_SeqAIJ; 2430841d4cb1SJunchao Zhang } 2431841d4cb1SJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGND,(char**)&(*B)->preferredordering[MAT_FACTOR_LU])); 2432841d4cb1SJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGNATURAL,(char**)&(*B)->preferredordering[MAT_FACTOR_ILU])); 2433841d4cb1SJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGNATURAL,(char**)&(*B)->preferredordering[MAT_FACTOR_ILUDT])); 2434841d4cb1SJunchao Zhang } else if (ftype == MAT_FACTOR_CHOLESKY || ftype == MAT_FACTOR_ICC) { 2435841d4cb1SJunchao Zhang if (!A->boundtocpu) { 2436841d4cb1SJunchao Zhang (*B)->ops->iccfactorsymbolic = MatICCFactorSymbolic_SeqAIJCUSPARSE; 2437841d4cb1SJunchao Zhang (*B)->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SeqAIJCUSPARSE; 2438841d4cb1SJunchao Zhang } else { 2439841d4cb1SJunchao Zhang (*B)->ops->iccfactorsymbolic = MatICCFactorSymbolic_SeqAIJ; 2440841d4cb1SJunchao Zhang (*B)->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SeqAIJ; 2441841d4cb1SJunchao Zhang } 2442841d4cb1SJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGND,(char**)&(*B)->preferredordering[MAT_FACTOR_CHOLESKY])); 2443841d4cb1SJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGNATURAL,(char**)&(*B)->preferredordering[MAT_FACTOR_ICC])); 2444841d4cb1SJunchao Zhang } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Factor type not supported for CUSPARSE Matrix Types"); 2445841d4cb1SJunchao Zhang 2446841d4cb1SJunchao Zhang PetscCall(MatSeqAIJSetPreallocation(*B,MAT_SKIP_ALLOCATION,NULL)); 2447841d4cb1SJunchao Zhang (*B)->canuseordering = PETSC_TRUE; 2448841d4cb1SJunchao Zhang PetscCall(PetscObjectComposeFunction((PetscObject)(*B),"MatFactorGetSolverType_C",MatFactorGetSolverType_seqaij_cusparse)); 2449841d4cb1SJunchao Zhang PetscFunctionReturn(0); 2450841d4cb1SJunchao Zhang } 2451841d4cb1SJunchao Zhang 24527e8381f9SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSECopyFromGPU(Mat A) 24537e8381f9SStefano Zampini { 24547e8381f9SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 24557e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2456*0dd8c0acSJunchao Zhang #if CUSPARSE_VERSION >= 13500 2457da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *fs = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 2458*0dd8c0acSJunchao Zhang #endif 24597e8381f9SStefano Zampini 24607e8381f9SStefano Zampini PetscFunctionBegin; 24617e8381f9SStefano Zampini if (A->offloadmask == PETSC_OFFLOAD_GPU) { 24629566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSECopyFromGPU,A,0,0,0)); 2463da112707SJunchao Zhang if (A->factortype == MAT_FACTOR_NONE) { 2464da112707SJunchao Zhang CsrMatrix *matrix = (CsrMatrix*)cusp->mat->mat; 24659566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(a->a, matrix->values->data().get(), a->nz*sizeof(PetscScalar), cudaMemcpyDeviceToHost)); 2466da112707SJunchao Zhang } 2467da112707SJunchao Zhang #if CUSPARSE_VERSION >= 13500 2468da112707SJunchao Zhang else if (fs->csrVal) { 2469da112707SJunchao Zhang /* We have a factorized matrix on device and are able to copy it to host */ 2470da112707SJunchao Zhang PetscCallCUDA(cudaMemcpy(a->a, fs->csrVal, a->nz*sizeof(PetscScalar), cudaMemcpyDeviceToHost)); 2471da112707SJunchao Zhang } 2472da112707SJunchao Zhang #endif 2473da112707SJunchao Zhang else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"No support for copying this type of factorized matrix from device to host"); 24749566063dSJacob Faibussowitsch PetscCall(PetscLogGpuToCpu(a->nz*sizeof(PetscScalar))); 24759566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSECopyFromGPU,A,0,0,0)); 24767e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_BOTH; 24777e8381f9SStefano Zampini } 24787e8381f9SStefano Zampini PetscFunctionReturn(0); 24797e8381f9SStefano Zampini } 24807e8381f9SStefano Zampini 24817e8381f9SStefano Zampini static PetscErrorCode MatSeqAIJGetArray_SeqAIJCUSPARSE(Mat A,PetscScalar *array[]) 24827e8381f9SStefano Zampini { 24837e8381f9SStefano Zampini PetscFunctionBegin; 24849566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyFromGPU(A)); 248567a45760SJunchao Zhang *array = ((Mat_SeqAIJ*)A->data)->a; 248667a45760SJunchao Zhang PetscFunctionReturn(0); 248767a45760SJunchao Zhang } 248867a45760SJunchao Zhang 248967a45760SJunchao Zhang static PetscErrorCode MatSeqAIJRestoreArray_SeqAIJCUSPARSE(Mat A,PetscScalar *array[]) 249067a45760SJunchao Zhang { 249167a45760SJunchao Zhang PetscFunctionBegin; 24927e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_CPU; 249367a45760SJunchao Zhang *array = NULL; 249467a45760SJunchao Zhang PetscFunctionReturn(0); 249567a45760SJunchao Zhang } 249667a45760SJunchao Zhang 249767a45760SJunchao Zhang static PetscErrorCode MatSeqAIJGetArrayRead_SeqAIJCUSPARSE(Mat A,const PetscScalar *array[]) 249867a45760SJunchao Zhang { 249967a45760SJunchao Zhang PetscFunctionBegin; 25009566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyFromGPU(A)); 250167a45760SJunchao Zhang *array = ((Mat_SeqAIJ*)A->data)->a; 250267a45760SJunchao Zhang PetscFunctionReturn(0); 250367a45760SJunchao Zhang } 250467a45760SJunchao Zhang 250567a45760SJunchao Zhang static PetscErrorCode MatSeqAIJRestoreArrayRead_SeqAIJCUSPARSE(Mat A,const PetscScalar *array[]) 250667a45760SJunchao Zhang { 250767a45760SJunchao Zhang PetscFunctionBegin; 250867a45760SJunchao Zhang *array = NULL; 250967a45760SJunchao Zhang PetscFunctionReturn(0); 251067a45760SJunchao Zhang } 251167a45760SJunchao Zhang 251267a45760SJunchao Zhang static PetscErrorCode MatSeqAIJGetArrayWrite_SeqAIJCUSPARSE(Mat A,PetscScalar *array[]) 251367a45760SJunchao Zhang { 251467a45760SJunchao Zhang PetscFunctionBegin; 251567a45760SJunchao Zhang *array = ((Mat_SeqAIJ*)A->data)->a; 251667a45760SJunchao Zhang PetscFunctionReturn(0); 251767a45760SJunchao Zhang } 251867a45760SJunchao Zhang 251967a45760SJunchao Zhang static PetscErrorCode MatSeqAIJRestoreArrayWrite_SeqAIJCUSPARSE(Mat A,PetscScalar *array[]) 252067a45760SJunchao Zhang { 252167a45760SJunchao Zhang PetscFunctionBegin; 252267a45760SJunchao Zhang A->offloadmask = PETSC_OFFLOAD_CPU; 252367a45760SJunchao Zhang *array = NULL; 25247e8381f9SStefano Zampini PetscFunctionReturn(0); 25257e8381f9SStefano Zampini } 25267e8381f9SStefano Zampini 25277ee59b9bSJunchao Zhang static PetscErrorCode MatSeqAIJGetCSRAndMemType_SeqAIJCUSPARSE(Mat A,const PetscInt **i,const PetscInt **j,PetscScalar **a,PetscMemType *mtype) 25287ee59b9bSJunchao Zhang { 25297ee59b9bSJunchao Zhang Mat_SeqAIJCUSPARSE *cusp; 25307ee59b9bSJunchao Zhang CsrMatrix *matrix; 25317ee59b9bSJunchao Zhang 25327ee59b9bSJunchao Zhang PetscFunctionBegin; 25337ee59b9bSJunchao Zhang PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 25347ee59b9bSJunchao Zhang PetscCheck(A->factortype == MAT_FACTOR_NONE, PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONGSTATE,"Not for factored matrix"); 25357ee59b9bSJunchao Zhang cusp = static_cast<Mat_SeqAIJCUSPARSE*>(A->spptr); 25367ee59b9bSJunchao Zhang PetscCheck(cusp != NULL,PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONGSTATE,"cusp is NULL"); 25377ee59b9bSJunchao Zhang matrix = (CsrMatrix*)cusp->mat->mat; 25387ee59b9bSJunchao Zhang 25397ee59b9bSJunchao Zhang if (i) { 25407ee59b9bSJunchao Zhang #if !defined(PETSC_USE_64BIT_INDICES) 25417ee59b9bSJunchao Zhang *i = matrix->row_offsets->data().get(); 25427ee59b9bSJunchao Zhang #else 25437ee59b9bSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSparse does not supported 64-bit indices"); 25447ee59b9bSJunchao Zhang #endif 25457ee59b9bSJunchao Zhang } 25467ee59b9bSJunchao Zhang if (j) { 25477ee59b9bSJunchao Zhang #if !defined(PETSC_USE_64BIT_INDICES) 25487ee59b9bSJunchao Zhang *j = matrix->column_indices->data().get(); 25497ee59b9bSJunchao Zhang #else 25507ee59b9bSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSparse does not supported 64-bit indices"); 25517ee59b9bSJunchao Zhang #endif 25527ee59b9bSJunchao Zhang } 25537ee59b9bSJunchao Zhang if (a) *a = matrix->values->data().get(); 25547ee59b9bSJunchao Zhang if (mtype) *mtype = PETSC_MEMTYPE_CUDA; 25557ee59b9bSJunchao Zhang PetscFunctionReturn(0); 25567ee59b9bSJunchao Zhang } 25577ee59b9bSJunchao Zhang 2558042217e8SBarry Smith PETSC_INTERN PetscErrorCode MatSeqAIJCUSPARSECopyToGPU(Mat A) 25599ae82921SPaul Mullowney { 2560aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 25617c700b8dSJunchao Zhang Mat_SeqAIJCUSPARSEMultStruct *matstruct = cusparsestruct->mat; 25629ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 2563213423ffSJunchao Zhang PetscInt m = A->rmap->n,*ii,*ridx,tmp; 2564aa372e3fSPaul Mullowney cusparseStatus_t stat; 2565abb89eb1SStefano Zampini PetscBool both = PETSC_TRUE; 25669ae82921SPaul Mullowney 25679ae82921SPaul Mullowney PetscFunctionBegin; 256828b400f6SJacob Faibussowitsch PetscCheck(!A->boundtocpu,PETSC_COMM_SELF,PETSC_ERR_GPU,"Cannot copy to GPU"); 2569c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 2570a49f1ed0SStefano Zampini if (A->nonzerostate == cusparsestruct->nonzerostate && cusparsestruct->format == MAT_CUSPARSE_CSR) { /* Copy values only */ 2571a49f1ed0SStefano Zampini CsrMatrix *matrix; 2572afb2bd1cSJunchao Zhang matrix = (CsrMatrix*)cusparsestruct->mat->mat; 257385ba7357SStefano Zampini 257408401ef6SPierre Jolivet PetscCheck(!a->nz || a->a,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CSR values"); 25759566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSECopyToGPU,A,0,0,0)); 2576afb2bd1cSJunchao Zhang matrix->values->assign(a->a, a->a+a->nz); 25779566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 25789566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu((a->nz)*sizeof(PetscScalar))); 25799566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSECopyToGPU,A,0,0,0)); 25809566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_FALSE)); 258134d6c7a5SJose E. Roman } else { 2582abb89eb1SStefano Zampini PetscInt nnz; 25839566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSECopyToGPU,A,0,0,0)); 25849566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEMultStruct_Destroy(&cusparsestruct->mat,cusparsestruct->format)); 25859566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE)); 25867c700b8dSJunchao Zhang delete cusparsestruct->workVector; 258781902715SJunchao Zhang delete cusparsestruct->rowoffsets_gpu; 2588a49f1ed0SStefano Zampini cusparsestruct->workVector = NULL; 2589a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu = NULL; 25909ae82921SPaul Mullowney try { 25919ae82921SPaul Mullowney if (a->compressedrow.use) { 25929ae82921SPaul Mullowney m = a->compressedrow.nrows; 25939ae82921SPaul Mullowney ii = a->compressedrow.i; 25949ae82921SPaul Mullowney ridx = a->compressedrow.rindex; 25959ae82921SPaul Mullowney } else { 2596213423ffSJunchao Zhang m = A->rmap->n; 2597213423ffSJunchao Zhang ii = a->i; 2598e6e9a74fSStefano Zampini ridx = NULL; 25999ae82921SPaul Mullowney } 260008401ef6SPierre Jolivet PetscCheck(ii,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CSR row data"); 2601abb89eb1SStefano Zampini if (!a->a) { nnz = ii[m]; both = PETSC_FALSE; } 2602abb89eb1SStefano Zampini else nnz = a->nz; 260308401ef6SPierre Jolivet PetscCheck(!nnz || a->j,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CSR column data"); 26049ae82921SPaul Mullowney 260585ba7357SStefano Zampini /* create cusparse matrix */ 2606abb89eb1SStefano Zampini cusparsestruct->nrows = m; 2607aa372e3fSPaul Mullowney matstruct = new Mat_SeqAIJCUSPARSEMultStruct; 26089566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&matstruct->descr)); 26099566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(matstruct->descr, CUSPARSE_INDEX_BASE_ZERO)); 26109566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(matstruct->descr, CUSPARSE_MATRIX_TYPE_GENERAL)); 26119ae82921SPaul Mullowney 26129566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(matstruct->alpha_one),sizeof(PetscScalar))); 26139566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(matstruct->beta_zero),sizeof(PetscScalar))); 26149566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(matstruct->beta_one), sizeof(PetscScalar))); 26159566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(matstruct->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice)); 26169566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(matstruct->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice)); 26179566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(matstruct->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice)); 26189566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetPointerMode(cusparsestruct->handle, CUSPARSE_POINTER_MODE_DEVICE)); 2619b06137fdSPaul Mullowney 2620aa372e3fSPaul Mullowney /* Build a hybrid/ellpack matrix if this option is chosen for the storage */ 2621aa372e3fSPaul Mullowney if (cusparsestruct->format==MAT_CUSPARSE_CSR) { 2622aa372e3fSPaul Mullowney /* set the matrix */ 2623afb2bd1cSJunchao Zhang CsrMatrix *mat= new CsrMatrix; 2624afb2bd1cSJunchao Zhang mat->num_rows = m; 2625afb2bd1cSJunchao Zhang mat->num_cols = A->cmap->n; 2626abb89eb1SStefano Zampini mat->num_entries = nnz; 2627afb2bd1cSJunchao Zhang mat->row_offsets = new THRUSTINTARRAY32(m+1); 2628afb2bd1cSJunchao Zhang mat->row_offsets->assign(ii, ii + m+1); 26299ae82921SPaul Mullowney 2630abb89eb1SStefano Zampini mat->column_indices = new THRUSTINTARRAY32(nnz); 2631abb89eb1SStefano Zampini mat->column_indices->assign(a->j, a->j+nnz); 2632aa372e3fSPaul Mullowney 2633abb89eb1SStefano Zampini mat->values = new THRUSTARRAY(nnz); 2634abb89eb1SStefano Zampini if (a->a) mat->values->assign(a->a, a->a+nnz); 2635aa372e3fSPaul Mullowney 2636aa372e3fSPaul Mullowney /* assign the pointer */ 2637afb2bd1cSJunchao Zhang matstruct->mat = mat; 2638afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2639afb2bd1cSJunchao Zhang if (mat->num_rows) { /* cusparse errors on empty matrices! */ 2640afb2bd1cSJunchao Zhang stat = cusparseCreateCsr(&matstruct->matDescr, 2641afb2bd1cSJunchao Zhang mat->num_rows, mat->num_cols, mat->num_entries, 2642afb2bd1cSJunchao Zhang mat->row_offsets->data().get(), mat->column_indices->data().get(), 2643afb2bd1cSJunchao Zhang mat->values->data().get(), 2644afb2bd1cSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, /* row offset, col idx types due to THRUSTINTARRAY32 */ 26459566063dSJacob Faibussowitsch CUSPARSE_INDEX_BASE_ZERO,cusparse_scalartype);PetscCallCUSPARSE(stat); 2646afb2bd1cSJunchao Zhang } 2647afb2bd1cSJunchao Zhang #endif 2648aa372e3fSPaul Mullowney } else if (cusparsestruct->format==MAT_CUSPARSE_ELL || cusparsestruct->format==MAT_CUSPARSE_HYB) { 2649afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2650afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 2651afb2bd1cSJunchao Zhang #else 2652afb2bd1cSJunchao Zhang CsrMatrix *mat= new CsrMatrix; 2653afb2bd1cSJunchao Zhang mat->num_rows = m; 2654afb2bd1cSJunchao Zhang mat->num_cols = A->cmap->n; 2655abb89eb1SStefano Zampini mat->num_entries = nnz; 2656afb2bd1cSJunchao Zhang mat->row_offsets = new THRUSTINTARRAY32(m+1); 2657afb2bd1cSJunchao Zhang mat->row_offsets->assign(ii, ii + m+1); 2658aa372e3fSPaul Mullowney 2659abb89eb1SStefano Zampini mat->column_indices = new THRUSTINTARRAY32(nnz); 2660abb89eb1SStefano Zampini mat->column_indices->assign(a->j, a->j+nnz); 2661aa372e3fSPaul Mullowney 2662abb89eb1SStefano Zampini mat->values = new THRUSTARRAY(nnz); 2663abb89eb1SStefano Zampini if (a->a) mat->values->assign(a->a, a->a+nnz); 2664aa372e3fSPaul Mullowney 2665aa372e3fSPaul Mullowney cusparseHybMat_t hybMat; 26669566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateHybMat(&hybMat)); 2667aa372e3fSPaul Mullowney cusparseHybPartition_t partition = cusparsestruct->format==MAT_CUSPARSE_ELL ? 2668aa372e3fSPaul Mullowney CUSPARSE_HYB_PARTITION_MAX : CUSPARSE_HYB_PARTITION_AUTO; 2669afb2bd1cSJunchao Zhang stat = cusparse_csr2hyb(cusparsestruct->handle, mat->num_rows, mat->num_cols, 2670afb2bd1cSJunchao Zhang matstruct->descr, mat->values->data().get(), 2671afb2bd1cSJunchao Zhang mat->row_offsets->data().get(), 2672afb2bd1cSJunchao Zhang mat->column_indices->data().get(), 26739566063dSJacob Faibussowitsch hybMat, 0, partition);PetscCallCUSPARSE(stat); 2674aa372e3fSPaul Mullowney /* assign the pointer */ 2675aa372e3fSPaul Mullowney matstruct->mat = hybMat; 2676aa372e3fSPaul Mullowney 2677afb2bd1cSJunchao Zhang if (mat) { 2678afb2bd1cSJunchao Zhang if (mat->values) delete (THRUSTARRAY*)mat->values; 2679afb2bd1cSJunchao Zhang if (mat->column_indices) delete (THRUSTINTARRAY32*)mat->column_indices; 2680afb2bd1cSJunchao Zhang if (mat->row_offsets) delete (THRUSTINTARRAY32*)mat->row_offsets; 2681afb2bd1cSJunchao Zhang delete (CsrMatrix*)mat; 2682087f3262SPaul Mullowney } 2683afb2bd1cSJunchao Zhang #endif 2684087f3262SPaul Mullowney } 2685ca45077fSPaul Mullowney 2686aa372e3fSPaul Mullowney /* assign the compressed row indices */ 2687213423ffSJunchao Zhang if (a->compressedrow.use) { 2688213423ffSJunchao Zhang cusparsestruct->workVector = new THRUSTARRAY(m); 2689aa372e3fSPaul Mullowney matstruct->cprowIndices = new THRUSTINTARRAY(m); 2690aa372e3fSPaul Mullowney matstruct->cprowIndices->assign(ridx,ridx+m); 2691213423ffSJunchao Zhang tmp = m; 2692213423ffSJunchao Zhang } else { 2693213423ffSJunchao Zhang cusparsestruct->workVector = NULL; 2694213423ffSJunchao Zhang matstruct->cprowIndices = NULL; 2695213423ffSJunchao Zhang tmp = 0; 2696213423ffSJunchao Zhang } 26979566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(((m+1)+(a->nz))*sizeof(int)+tmp*sizeof(PetscInt)+(3+(a->nz))*sizeof(PetscScalar))); 2698aa372e3fSPaul Mullowney 2699aa372e3fSPaul Mullowney /* assign the pointer */ 2700aa372e3fSPaul Mullowney cusparsestruct->mat = matstruct; 27019ae82921SPaul Mullowney } catch(char *ex) { 270298921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 27039ae82921SPaul Mullowney } 27049566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 27059566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSECopyToGPU,A,0,0,0)); 270634d6c7a5SJose E. Roman cusparsestruct->nonzerostate = A->nonzerostate; 270734d6c7a5SJose E. Roman } 2708abb89eb1SStefano Zampini if (both) A->offloadmask = PETSC_OFFLOAD_BOTH; 27099ae82921SPaul Mullowney } 27109ae82921SPaul Mullowney PetscFunctionReturn(0); 27119ae82921SPaul Mullowney } 27129ae82921SPaul Mullowney 2713c41cb2e2SAlejandro Lamas Daviña struct VecCUDAPlusEquals 2714aa372e3fSPaul Mullowney { 2715aa372e3fSPaul Mullowney template <typename Tuple> 2716aa372e3fSPaul Mullowney __host__ __device__ 2717aa372e3fSPaul Mullowney void operator()(Tuple t) 2718aa372e3fSPaul Mullowney { 2719aa372e3fSPaul Mullowney thrust::get<1>(t) = thrust::get<1>(t) + thrust::get<0>(t); 2720aa372e3fSPaul Mullowney } 2721aa372e3fSPaul Mullowney }; 2722aa372e3fSPaul Mullowney 27237e8381f9SStefano Zampini struct VecCUDAEquals 27247e8381f9SStefano Zampini { 27257e8381f9SStefano Zampini template <typename Tuple> 27267e8381f9SStefano Zampini __host__ __device__ 27277e8381f9SStefano Zampini void operator()(Tuple t) 27287e8381f9SStefano Zampini { 27297e8381f9SStefano Zampini thrust::get<1>(t) = thrust::get<0>(t); 27307e8381f9SStefano Zampini } 27317e8381f9SStefano Zampini }; 27327e8381f9SStefano Zampini 2733e6e9a74fSStefano Zampini struct VecCUDAEqualsReverse 2734e6e9a74fSStefano Zampini { 2735e6e9a74fSStefano Zampini template <typename Tuple> 2736e6e9a74fSStefano Zampini __host__ __device__ 2737e6e9a74fSStefano Zampini void operator()(Tuple t) 2738e6e9a74fSStefano Zampini { 2739e6e9a74fSStefano Zampini thrust::get<0>(t) = thrust::get<1>(t); 2740e6e9a74fSStefano Zampini } 2741e6e9a74fSStefano Zampini }; 2742e6e9a74fSStefano Zampini 2743afb2bd1cSJunchao Zhang struct MatMatCusparse { 2744ccdfe979SStefano Zampini PetscBool cisdense; 2745ccdfe979SStefano Zampini PetscScalar *Bt; 2746ccdfe979SStefano Zampini Mat X; 2747fcdce8c4SStefano Zampini PetscBool reusesym; /* Cusparse does not have split symbolic and numeric phases for sparse matmat operations */ 2748fcdce8c4SStefano Zampini PetscLogDouble flops; 2749fcdce8c4SStefano Zampini CsrMatrix *Bcsr; 2750b4285af6SJunchao Zhang 2751afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2752fcdce8c4SStefano Zampini cusparseSpMatDescr_t matSpBDescr; 2753afb2bd1cSJunchao Zhang PetscBool initialized; /* C = alpha op(A) op(B) + beta C */ 2754afb2bd1cSJunchao Zhang cusparseDnMatDescr_t matBDescr; 2755afb2bd1cSJunchao Zhang cusparseDnMatDescr_t matCDescr; 2756afb2bd1cSJunchao Zhang PetscInt Blda,Clda; /* Record leading dimensions of B and C here to detect changes*/ 2757b4285af6SJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,4,0) 2758b4285af6SJunchao Zhang void *dBuffer4; 2759b4285af6SJunchao Zhang void *dBuffer5; 2760b4285af6SJunchao Zhang #endif 2761fcdce8c4SStefano Zampini size_t mmBufferSize; 2762fcdce8c4SStefano Zampini void *mmBuffer; 2763fcdce8c4SStefano Zampini void *mmBuffer2; /* SpGEMM WorkEstimation buffer */ 2764fcdce8c4SStefano Zampini cusparseSpGEMMDescr_t spgemmDesc; 2765afb2bd1cSJunchao Zhang #endif 2766afb2bd1cSJunchao Zhang }; 2767ccdfe979SStefano Zampini 2768ccdfe979SStefano Zampini static PetscErrorCode MatDestroy_MatMatCusparse(void *data) 2769ccdfe979SStefano Zampini { 2770ccdfe979SStefano Zampini MatMatCusparse *mmdata = (MatMatCusparse *)data; 2771ccdfe979SStefano Zampini 2772ccdfe979SStefano Zampini PetscFunctionBegin; 27739566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(mmdata->Bt)); 2774fcdce8c4SStefano Zampini delete mmdata->Bcsr; 2775afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 27769566063dSJacob Faibussowitsch if (mmdata->matSpBDescr) PetscCallCUSPARSE(cusparseDestroySpMat(mmdata->matSpBDescr)); 27779566063dSJacob Faibussowitsch if (mmdata->matBDescr) PetscCallCUSPARSE(cusparseDestroyDnMat(mmdata->matBDescr)); 27789566063dSJacob Faibussowitsch if (mmdata->matCDescr) PetscCallCUSPARSE(cusparseDestroyDnMat(mmdata->matCDescr)); 27799566063dSJacob Faibussowitsch if (mmdata->spgemmDesc) PetscCallCUSPARSE(cusparseSpGEMM_destroyDescr(mmdata->spgemmDesc)); 2780b4285af6SJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,4,0) 27819566063dSJacob Faibussowitsch if (mmdata->dBuffer4) PetscCallCUDA(cudaFree(mmdata->dBuffer4)); 27829566063dSJacob Faibussowitsch if (mmdata->dBuffer5) PetscCallCUDA(cudaFree(mmdata->dBuffer5)); 2783b4285af6SJunchao Zhang #endif 27849566063dSJacob Faibussowitsch if (mmdata->mmBuffer) PetscCallCUDA(cudaFree(mmdata->mmBuffer)); 27859566063dSJacob Faibussowitsch if (mmdata->mmBuffer2) PetscCallCUDA(cudaFree(mmdata->mmBuffer2)); 2786afb2bd1cSJunchao Zhang #endif 27879566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mmdata->X)); 27889566063dSJacob Faibussowitsch PetscCall(PetscFree(data)); 2789ccdfe979SStefano Zampini PetscFunctionReturn(0); 2790ccdfe979SStefano Zampini } 2791ccdfe979SStefano Zampini 2792ccdfe979SStefano Zampini PETSC_INTERN PetscErrorCode MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Private(Mat,Mat,Mat,PetscBool,PetscBool); 2793ccdfe979SStefano Zampini 2794ccdfe979SStefano Zampini static PetscErrorCode MatProductNumeric_SeqAIJCUSPARSE_SeqDENSECUDA(Mat C) 2795ccdfe979SStefano Zampini { 2796ccdfe979SStefano Zampini Mat_Product *product = C->product; 2797ccdfe979SStefano Zampini Mat A,B; 2798afb2bd1cSJunchao Zhang PetscInt m,n,blda,clda; 2799ccdfe979SStefano Zampini PetscBool flg,biscuda; 2800ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSE *cusp; 2801ccdfe979SStefano Zampini cusparseStatus_t stat; 2802ccdfe979SStefano Zampini cusparseOperation_t opA; 2803ccdfe979SStefano Zampini const PetscScalar *barray; 2804ccdfe979SStefano Zampini PetscScalar *carray; 2805ccdfe979SStefano Zampini MatMatCusparse *mmdata; 2806ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *mat; 2807ccdfe979SStefano Zampini CsrMatrix *csrmat; 2808ccdfe979SStefano Zampini 2809ccdfe979SStefano Zampini PetscFunctionBegin; 2810ccdfe979SStefano Zampini MatCheckProduct(C,1); 281128b400f6SJacob Faibussowitsch PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data empty"); 2812ccdfe979SStefano Zampini mmdata = (MatMatCusparse*)product->data; 2813ccdfe979SStefano Zampini A = product->A; 2814ccdfe979SStefano Zampini B = product->B; 28159566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg)); 281628b400f6SJacob Faibussowitsch PetscCheck(flg,PetscObjectComm((PetscObject)A),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 2817ccdfe979SStefano Zampini /* currently CopyToGpu does not copy if the matrix is bound to CPU 2818ccdfe979SStefano Zampini Instead of silently accepting the wrong answer, I prefer to raise the error */ 281928b400f6SJacob Faibussowitsch PetscCheck(!A->boundtocpu,PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONG,"Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 28209566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 2821ccdfe979SStefano Zampini cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2822ccdfe979SStefano Zampini switch (product->type) { 2823ccdfe979SStefano Zampini case MATPRODUCT_AB: 2824ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 2825ccdfe979SStefano Zampini mat = cusp->mat; 2826ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2827ccdfe979SStefano Zampini m = A->rmap->n; 2828ccdfe979SStefano Zampini n = B->cmap->n; 2829ccdfe979SStefano Zampini break; 2830ccdfe979SStefano Zampini case MATPRODUCT_AtB: 28311a2c6b5cSJunchao Zhang if (!A->form_explicit_transpose) { 2832e6e9a74fSStefano Zampini mat = cusp->mat; 2833e6e9a74fSStefano Zampini opA = CUSPARSE_OPERATION_TRANSPOSE; 2834e6e9a74fSStefano Zampini } else { 28359566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEFormExplicitTranspose(A)); 2836ccdfe979SStefano Zampini mat = cusp->matTranspose; 2837ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2838e6e9a74fSStefano Zampini } 2839ccdfe979SStefano Zampini m = A->cmap->n; 2840ccdfe979SStefano Zampini n = B->cmap->n; 2841ccdfe979SStefano Zampini break; 2842ccdfe979SStefano Zampini case MATPRODUCT_ABt: 2843ccdfe979SStefano Zampini case MATPRODUCT_RARt: 2844ccdfe979SStefano Zampini mat = cusp->mat; 2845ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2846ccdfe979SStefano Zampini m = A->rmap->n; 2847ccdfe979SStefano Zampini n = B->rmap->n; 2848ccdfe979SStefano Zampini break; 2849ccdfe979SStefano Zampini default: 285098921bdaSJacob Faibussowitsch SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 2851ccdfe979SStefano Zampini } 285228b400f6SJacob Faibussowitsch PetscCheck(mat,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 2853ccdfe979SStefano Zampini csrmat = (CsrMatrix*)mat->mat; 2854ccdfe979SStefano Zampini /* if the user passed a CPU matrix, copy the data to the GPU */ 28559566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)B,MATSEQDENSECUDA,&biscuda)); 28569566063dSJacob Faibussowitsch if (!biscuda) PetscCall(MatConvert(B,MATSEQDENSECUDA,MAT_INPLACE_MATRIX,&B)); 28579566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAGetArrayRead(B,&barray)); 2858afb2bd1cSJunchao Zhang 28599566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(B,&blda)); 2860c8378d12SStefano Zampini if (product->type == MATPRODUCT_RARt || product->type == MATPRODUCT_PtAP) { 28619566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAGetArrayWrite(mmdata->X,&carray)); 28629566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mmdata->X,&clda)); 2863c8378d12SStefano Zampini } else { 28649566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAGetArrayWrite(C,&carray)); 28659566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(C,&clda)); 2866c8378d12SStefano Zampini } 2867c8378d12SStefano Zampini 28689566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 2869afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2870afb2bd1cSJunchao Zhang cusparseOperation_t opB = (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) ? CUSPARSE_OPERATION_TRANSPOSE : CUSPARSE_OPERATION_NON_TRANSPOSE; 2871a5b23f4aSJose E. Roman /* (re)allocate mmBuffer if not initialized or LDAs are different */ 2872afb2bd1cSJunchao Zhang if (!mmdata->initialized || mmdata->Blda != blda || mmdata->Clda != clda) { 2873fcdce8c4SStefano Zampini size_t mmBufferSize; 28749566063dSJacob Faibussowitsch if (mmdata->initialized && mmdata->Blda != blda) {PetscCallCUSPARSE(cusparseDestroyDnMat(mmdata->matBDescr)); mmdata->matBDescr = NULL;} 2875afb2bd1cSJunchao Zhang if (!mmdata->matBDescr) { 28769566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateDnMat(&mmdata->matBDescr,B->rmap->n,B->cmap->n,blda,(void*)barray,cusparse_scalartype,CUSPARSE_ORDER_COL)); 2877afb2bd1cSJunchao Zhang mmdata->Blda = blda; 2878afb2bd1cSJunchao Zhang } 2879c8378d12SStefano Zampini 28809566063dSJacob Faibussowitsch if (mmdata->initialized && mmdata->Clda != clda) {PetscCallCUSPARSE(cusparseDestroyDnMat(mmdata->matCDescr)); mmdata->matCDescr = NULL;} 2881afb2bd1cSJunchao Zhang if (!mmdata->matCDescr) { /* matCDescr is for C or mmdata->X */ 28829566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateDnMat(&mmdata->matCDescr,m,n,clda,(void*)carray,cusparse_scalartype,CUSPARSE_ORDER_COL)); 2883afb2bd1cSJunchao Zhang mmdata->Clda = clda; 2884afb2bd1cSJunchao Zhang } 2885afb2bd1cSJunchao Zhang 2886afb2bd1cSJunchao Zhang if (!mat->matDescr) { 2887afb2bd1cSJunchao Zhang stat = cusparseCreateCsr(&mat->matDescr, 2888afb2bd1cSJunchao Zhang csrmat->num_rows, csrmat->num_cols, csrmat->num_entries, 2889afb2bd1cSJunchao Zhang csrmat->row_offsets->data().get(), csrmat->column_indices->data().get(), 2890afb2bd1cSJunchao Zhang csrmat->values->data().get(), 2891afb2bd1cSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, /* row offset, col idx types due to THRUSTINTARRAY32 */ 28929566063dSJacob Faibussowitsch CUSPARSE_INDEX_BASE_ZERO,cusparse_scalartype);PetscCallCUSPARSE(stat); 2893afb2bd1cSJunchao Zhang } 2894afb2bd1cSJunchao Zhang stat = cusparseSpMM_bufferSize(cusp->handle,opA,opB,mat->alpha_one, 2895afb2bd1cSJunchao Zhang mat->matDescr,mmdata->matBDescr,mat->beta_zero, 2896afb2bd1cSJunchao Zhang mmdata->matCDescr,cusparse_scalartype, 28979566063dSJacob Faibussowitsch cusp->spmmAlg,&mmBufferSize);PetscCallCUSPARSE(stat); 2898fcdce8c4SStefano Zampini if ((mmdata->mmBuffer && mmdata->mmBufferSize < mmBufferSize) || !mmdata->mmBuffer) { 28999566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(mmdata->mmBuffer)); 29009566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&mmdata->mmBuffer,mmBufferSize)); 2901fcdce8c4SStefano Zampini mmdata->mmBufferSize = mmBufferSize; 2902fcdce8c4SStefano Zampini } 2903afb2bd1cSJunchao Zhang mmdata->initialized = PETSC_TRUE; 2904afb2bd1cSJunchao Zhang } else { 2905afb2bd1cSJunchao Zhang /* to be safe, always update pointers of the mats */ 29069566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSpMatSetValues(mat->matDescr,csrmat->values->data().get())); 29079566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseDnMatSetValues(mmdata->matBDescr,(void*)barray)); 29089566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseDnMatSetValues(mmdata->matCDescr,(void*)carray)); 2909afb2bd1cSJunchao Zhang } 2910afb2bd1cSJunchao Zhang 2911afb2bd1cSJunchao Zhang /* do cusparseSpMM, which supports transpose on B */ 2912afb2bd1cSJunchao Zhang stat = cusparseSpMM(cusp->handle,opA,opB,mat->alpha_one, 2913afb2bd1cSJunchao Zhang mat->matDescr,mmdata->matBDescr,mat->beta_zero, 2914afb2bd1cSJunchao Zhang mmdata->matCDescr,cusparse_scalartype, 29159566063dSJacob Faibussowitsch cusp->spmmAlg,mmdata->mmBuffer);PetscCallCUSPARSE(stat); 2916afb2bd1cSJunchao Zhang #else 2917afb2bd1cSJunchao Zhang PetscInt k; 2918afb2bd1cSJunchao Zhang /* cusparseXcsrmm does not support transpose on B */ 2919ccdfe979SStefano Zampini if (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) { 2920ccdfe979SStefano Zampini cublasHandle_t cublasv2handle; 2921ccdfe979SStefano Zampini cublasStatus_t cerr; 2922ccdfe979SStefano Zampini 29239566063dSJacob Faibussowitsch PetscCall(PetscCUBLASGetHandle(&cublasv2handle)); 2924ccdfe979SStefano Zampini cerr = cublasXgeam(cublasv2handle,CUBLAS_OP_T,CUBLAS_OP_T, 2925ccdfe979SStefano Zampini B->cmap->n,B->rmap->n, 2926ccdfe979SStefano Zampini &PETSC_CUSPARSE_ONE ,barray,blda, 2927ccdfe979SStefano Zampini &PETSC_CUSPARSE_ZERO,barray,blda, 29289566063dSJacob Faibussowitsch mmdata->Bt,B->cmap->n);PetscCallCUBLAS(cerr); 2929ccdfe979SStefano Zampini blda = B->cmap->n; 2930afb2bd1cSJunchao Zhang k = B->cmap->n; 2931afb2bd1cSJunchao Zhang } else { 2932afb2bd1cSJunchao Zhang k = B->rmap->n; 2933ccdfe979SStefano Zampini } 2934ccdfe979SStefano Zampini 2935afb2bd1cSJunchao Zhang /* perform the MatMat operation, op(A) is m x k, op(B) is k x n */ 2936ccdfe979SStefano Zampini stat = cusparse_csr_spmm(cusp->handle,opA,m,n,k, 2937afb2bd1cSJunchao Zhang csrmat->num_entries,mat->alpha_one,mat->descr, 2938ccdfe979SStefano Zampini csrmat->values->data().get(), 2939ccdfe979SStefano Zampini csrmat->row_offsets->data().get(), 2940ccdfe979SStefano Zampini csrmat->column_indices->data().get(), 2941ccdfe979SStefano Zampini mmdata->Bt ? mmdata->Bt : barray,blda,mat->beta_zero, 29429566063dSJacob Faibussowitsch carray,clda);PetscCallCUSPARSE(stat); 2943afb2bd1cSJunchao Zhang #endif 29449566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 29459566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(n*2.0*csrmat->num_entries)); 29469566063dSJacob Faibussowitsch PetscCall(MatDenseCUDARestoreArrayRead(B,&barray)); 2947ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt) { 29489566063dSJacob Faibussowitsch PetscCall(MatDenseCUDARestoreArrayWrite(mmdata->X,&carray)); 29499566063dSJacob Faibussowitsch PetscCall(MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Private(B,mmdata->X,C,PETSC_FALSE,PETSC_FALSE)); 2950ccdfe979SStefano Zampini } else if (product->type == MATPRODUCT_PtAP) { 29519566063dSJacob Faibussowitsch PetscCall(MatDenseCUDARestoreArrayWrite(mmdata->X,&carray)); 29529566063dSJacob Faibussowitsch PetscCall(MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Private(B,mmdata->X,C,PETSC_TRUE,PETSC_FALSE)); 2953ccdfe979SStefano Zampini } else { 29549566063dSJacob Faibussowitsch PetscCall(MatDenseCUDARestoreArrayWrite(C,&carray)); 2955ccdfe979SStefano Zampini } 2956ccdfe979SStefano Zampini if (mmdata->cisdense) { 29579566063dSJacob Faibussowitsch PetscCall(MatConvert(C,MATSEQDENSE,MAT_INPLACE_MATRIX,&C)); 2958ccdfe979SStefano Zampini } 2959ccdfe979SStefano Zampini if (!biscuda) { 29609566063dSJacob Faibussowitsch PetscCall(MatConvert(B,MATSEQDENSE,MAT_INPLACE_MATRIX,&B)); 2961ccdfe979SStefano Zampini } 2962ccdfe979SStefano Zampini PetscFunctionReturn(0); 2963ccdfe979SStefano Zampini } 2964ccdfe979SStefano Zampini 2965ccdfe979SStefano Zampini static PetscErrorCode MatProductSymbolic_SeqAIJCUSPARSE_SeqDENSECUDA(Mat C) 2966ccdfe979SStefano Zampini { 2967ccdfe979SStefano Zampini Mat_Product *product = C->product; 2968ccdfe979SStefano Zampini Mat A,B; 2969ccdfe979SStefano Zampini PetscInt m,n; 2970ccdfe979SStefano Zampini PetscBool cisdense,flg; 2971ccdfe979SStefano Zampini MatMatCusparse *mmdata; 2972ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSE *cusp; 2973ccdfe979SStefano Zampini 2974ccdfe979SStefano Zampini PetscFunctionBegin; 2975ccdfe979SStefano Zampini MatCheckProduct(C,1); 297628b400f6SJacob Faibussowitsch PetscCheck(!C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data not empty"); 2977ccdfe979SStefano Zampini A = product->A; 2978ccdfe979SStefano Zampini B = product->B; 29799566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg)); 298028b400f6SJacob Faibussowitsch PetscCheck(flg,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 2981ccdfe979SStefano Zampini cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 298208401ef6SPierre Jolivet PetscCheck(cusp->format == MAT_CUSPARSE_CSR,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2983ccdfe979SStefano Zampini switch (product->type) { 2984ccdfe979SStefano Zampini case MATPRODUCT_AB: 2985ccdfe979SStefano Zampini m = A->rmap->n; 2986ccdfe979SStefano Zampini n = B->cmap->n; 2987ccdfe979SStefano Zampini break; 2988ccdfe979SStefano Zampini case MATPRODUCT_AtB: 2989ccdfe979SStefano Zampini m = A->cmap->n; 2990ccdfe979SStefano Zampini n = B->cmap->n; 2991ccdfe979SStefano Zampini break; 2992ccdfe979SStefano Zampini case MATPRODUCT_ABt: 2993ccdfe979SStefano Zampini m = A->rmap->n; 2994ccdfe979SStefano Zampini n = B->rmap->n; 2995ccdfe979SStefano Zampini break; 2996ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 2997ccdfe979SStefano Zampini m = B->cmap->n; 2998ccdfe979SStefano Zampini n = B->cmap->n; 2999ccdfe979SStefano Zampini break; 3000ccdfe979SStefano Zampini case MATPRODUCT_RARt: 3001ccdfe979SStefano Zampini m = B->rmap->n; 3002ccdfe979SStefano Zampini n = B->rmap->n; 3003ccdfe979SStefano Zampini break; 3004ccdfe979SStefano Zampini default: 300598921bdaSJacob Faibussowitsch SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 3006ccdfe979SStefano Zampini } 30079566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C,m,n,m,n)); 3008ccdfe979SStefano Zampini /* if C is of type MATSEQDENSE (CPU), perform the operation on the GPU and then copy on the CPU */ 30099566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)C,MATSEQDENSE,&cisdense)); 30109566063dSJacob Faibussowitsch PetscCall(MatSetType(C,MATSEQDENSECUDA)); 3011ccdfe979SStefano Zampini 3012ccdfe979SStefano Zampini /* product data */ 30139566063dSJacob Faibussowitsch PetscCall(PetscNew(&mmdata)); 3014ccdfe979SStefano Zampini mmdata->cisdense = cisdense; 3015afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_LT(11,0,0) 3016afb2bd1cSJunchao Zhang /* cusparseXcsrmm does not support transpose on B, so we allocate buffer to store B^T */ 3017ccdfe979SStefano Zampini if (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) { 30189566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void**)&mmdata->Bt,(size_t)B->rmap->n*(size_t)B->cmap->n*sizeof(PetscScalar))); 3019ccdfe979SStefano Zampini } 3020afb2bd1cSJunchao Zhang #endif 3021ccdfe979SStefano Zampini /* for these products we need intermediate storage */ 3022ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt || product->type == MATPRODUCT_PtAP) { 30239566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)C),&mmdata->X)); 30249566063dSJacob Faibussowitsch PetscCall(MatSetType(mmdata->X,MATSEQDENSECUDA)); 3025ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt) { /* do not preallocate, since the first call to MatDenseCUDAGetArray will preallocate on the GPU for us */ 30269566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mmdata->X,A->rmap->n,B->rmap->n,A->rmap->n,B->rmap->n)); 3027ccdfe979SStefano Zampini } else { 30289566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mmdata->X,A->rmap->n,B->cmap->n,A->rmap->n,B->cmap->n)); 3029ccdfe979SStefano Zampini } 3030ccdfe979SStefano Zampini } 3031ccdfe979SStefano Zampini C->product->data = mmdata; 3032ccdfe979SStefano Zampini C->product->destroy = MatDestroy_MatMatCusparse; 3033ccdfe979SStefano Zampini 3034ccdfe979SStefano Zampini C->ops->productnumeric = MatProductNumeric_SeqAIJCUSPARSE_SeqDENSECUDA; 3035ccdfe979SStefano Zampini PetscFunctionReturn(0); 3036ccdfe979SStefano Zampini } 3037ccdfe979SStefano Zampini 3038fcdce8c4SStefano Zampini static PetscErrorCode MatProductNumeric_SeqAIJCUSPARSE_SeqAIJCUSPARSE(Mat C) 3039ccdfe979SStefano Zampini { 3040ccdfe979SStefano Zampini Mat_Product *product = C->product; 3041fcdce8c4SStefano Zampini Mat A,B; 3042fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp,*Bcusp,*Ccusp; 3043fcdce8c4SStefano Zampini Mat_SeqAIJ *c = (Mat_SeqAIJ*)C->data; 3044fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Amat,*Bmat,*Cmat; 3045fcdce8c4SStefano Zampini CsrMatrix *Acsr,*Bcsr,*Ccsr; 3046fcdce8c4SStefano Zampini PetscBool flg; 3047fcdce8c4SStefano Zampini cusparseStatus_t stat; 3048fcdce8c4SStefano Zampini MatProductType ptype; 3049fcdce8c4SStefano Zampini MatMatCusparse *mmdata; 3050fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3051fcdce8c4SStefano Zampini cusparseSpMatDescr_t BmatSpDescr; 3052fcdce8c4SStefano Zampini #endif 3053b4285af6SJunchao Zhang cusparseOperation_t opA = CUSPARSE_OPERATION_NON_TRANSPOSE,opB = CUSPARSE_OPERATION_NON_TRANSPOSE; /* cuSPARSE spgemm doesn't support transpose yet */ 3054ccdfe979SStefano Zampini 3055ccdfe979SStefano Zampini PetscFunctionBegin; 3056ccdfe979SStefano Zampini MatCheckProduct(C,1); 305728b400f6SJacob Faibussowitsch PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data empty"); 30589566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)C,MATSEQAIJCUSPARSE,&flg)); 305928b400f6SJacob Faibussowitsch PetscCheck(flg,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for C of type %s",((PetscObject)C)->type_name); 3060fcdce8c4SStefano Zampini mmdata = (MatMatCusparse*)C->product->data; 3061fcdce8c4SStefano Zampini A = product->A; 3062fcdce8c4SStefano Zampini B = product->B; 3063fcdce8c4SStefano Zampini if (mmdata->reusesym) { /* this happens when api_user is true, meaning that the matrix values have been already computed in the MatProductSymbolic phase */ 3064fcdce8c4SStefano Zampini mmdata->reusesym = PETSC_FALSE; 3065fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)C->spptr; 306608401ef6SPierre Jolivet PetscCheck(Ccusp->format == MAT_CUSPARSE_CSR,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 3067fcdce8c4SStefano Zampini Cmat = Ccusp->mat; 306828b400f6SJacob Faibussowitsch PetscCheck(Cmat,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C mult struct for product type %s",MatProductTypes[C->product->type]); 3069fcdce8c4SStefano Zampini Ccsr = (CsrMatrix*)Cmat->mat; 307028b400f6SJacob Faibussowitsch PetscCheck(Ccsr,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C CSR struct"); 3071fcdce8c4SStefano Zampini goto finalize; 3072fcdce8c4SStefano Zampini } 3073fcdce8c4SStefano Zampini if (!c->nz) goto finalize; 30749566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg)); 307528b400f6SJacob Faibussowitsch PetscCheck(flg,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 30769566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)B,MATSEQAIJCUSPARSE,&flg)); 307728b400f6SJacob Faibussowitsch PetscCheck(flg,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for B of type %s",((PetscObject)B)->type_name); 307828b400f6SJacob Faibussowitsch PetscCheck(!A->boundtocpu,PetscObjectComm((PetscObject)C),PETSC_ERR_ARG_WRONG,"Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 307928b400f6SJacob Faibussowitsch PetscCheck(!B->boundtocpu,PetscObjectComm((PetscObject)C),PETSC_ERR_ARG_WRONG,"Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 3080fcdce8c4SStefano Zampini Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3081fcdce8c4SStefano Zampini Bcusp = (Mat_SeqAIJCUSPARSE*)B->spptr; 3082fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)C->spptr; 308308401ef6SPierre Jolivet PetscCheck(Acusp->format == MAT_CUSPARSE_CSR,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 308408401ef6SPierre Jolivet PetscCheck(Bcusp->format == MAT_CUSPARSE_CSR,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 308508401ef6SPierre Jolivet PetscCheck(Ccusp->format == MAT_CUSPARSE_CSR,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 30869566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 30879566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(B)); 3088fcdce8c4SStefano Zampini 3089fcdce8c4SStefano Zampini ptype = product->type; 3090fa046f9fSJunchao Zhang if (A->symmetric && ptype == MATPRODUCT_AtB) { 3091fa046f9fSJunchao Zhang ptype = MATPRODUCT_AB; 309228b400f6SJacob Faibussowitsch PetscCheck(product->symbolic_used_the_fact_A_is_symmetric,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Symbolic should have been built using the fact that A is symmetric"); 3093fa046f9fSJunchao Zhang } 3094fa046f9fSJunchao Zhang if (B->symmetric && ptype == MATPRODUCT_ABt) { 3095fa046f9fSJunchao Zhang ptype = MATPRODUCT_AB; 309628b400f6SJacob Faibussowitsch PetscCheck(product->symbolic_used_the_fact_B_is_symmetric,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Symbolic should have been built using the fact that B is symmetric"); 3097fa046f9fSJunchao Zhang } 3098fcdce8c4SStefano Zampini switch (ptype) { 3099fcdce8c4SStefano Zampini case MATPRODUCT_AB: 3100fcdce8c4SStefano Zampini Amat = Acusp->mat; 3101fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 3102fcdce8c4SStefano Zampini break; 3103fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 3104fcdce8c4SStefano Zampini Amat = Acusp->matTranspose; 3105fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 3106fcdce8c4SStefano Zampini break; 3107fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 3108fcdce8c4SStefano Zampini Amat = Acusp->mat; 3109fcdce8c4SStefano Zampini Bmat = Bcusp->matTranspose; 3110fcdce8c4SStefano Zampini break; 3111fcdce8c4SStefano Zampini default: 311298921bdaSJacob Faibussowitsch SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 3113fcdce8c4SStefano Zampini } 3114fcdce8c4SStefano Zampini Cmat = Ccusp->mat; 311528b400f6SJacob Faibussowitsch PetscCheck(Amat,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A mult struct for product type %s",MatProductTypes[ptype]); 311628b400f6SJacob Faibussowitsch PetscCheck(Bmat,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B mult struct for product type %s",MatProductTypes[ptype]); 311728b400f6SJacob Faibussowitsch PetscCheck(Cmat,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C mult struct for product type %s",MatProductTypes[ptype]); 3118fcdce8c4SStefano Zampini Acsr = (CsrMatrix*)Amat->mat; 3119fcdce8c4SStefano Zampini Bcsr = mmdata->Bcsr ? mmdata->Bcsr : (CsrMatrix*)Bmat->mat; /* B may be in compressed row storage */ 3120fcdce8c4SStefano Zampini Ccsr = (CsrMatrix*)Cmat->mat; 312128b400f6SJacob Faibussowitsch PetscCheck(Acsr,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A CSR struct"); 312228b400f6SJacob Faibussowitsch PetscCheck(Bcsr,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B CSR struct"); 312328b400f6SJacob Faibussowitsch PetscCheck(Ccsr,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C CSR struct"); 31249566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 3125fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3126fcdce8c4SStefano Zampini BmatSpDescr = mmdata->Bcsr ? mmdata->matSpBDescr : Bmat->matDescr; /* B may be in compressed row storage */ 31279566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_DEVICE)); 3128b4285af6SJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,4,0) 3129b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_compute(Ccusp->handle, opA, opB, 3130b4285af6SJunchao Zhang Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 3131b4285af6SJunchao Zhang cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 31329566063dSJacob Faibussowitsch mmdata->spgemmDesc);PetscCallCUSPARSE(stat); 3133b4285af6SJunchao Zhang #else 3134b4285af6SJunchao Zhang stat = cusparseSpGEMM_compute(Ccusp->handle, opA, opB, 3135fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 3136fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 31379566063dSJacob Faibussowitsch mmdata->spgemmDesc, &mmdata->mmBufferSize, mmdata->mmBuffer);PetscCallCUSPARSE(stat); 3138b4285af6SJunchao Zhang stat = cusparseSpGEMM_copy(Ccusp->handle, opA, opB, 3139fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 31409566063dSJacob Faibussowitsch cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc);PetscCallCUSPARSE(stat); 3141b4285af6SJunchao Zhang #endif 3142fcdce8c4SStefano Zampini #else 3143b4285af6SJunchao Zhang stat = cusparse_csr_spgemm(Ccusp->handle, opA, opB, 3144fcdce8c4SStefano Zampini Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, 3145fcdce8c4SStefano Zampini Amat->descr, Acsr->num_entries, Acsr->values->data().get(), Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), 3146fcdce8c4SStefano Zampini Bmat->descr, Bcsr->num_entries, Bcsr->values->data().get(), Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 31479566063dSJacob Faibussowitsch Cmat->descr, Ccsr->values->data().get(), Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get());PetscCallCUSPARSE(stat); 3148fcdce8c4SStefano Zampini #endif 31499566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(mmdata->flops)); 31509566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 31519566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 3152fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_GPU; 3153fcdce8c4SStefano Zampini finalize: 3154fcdce8c4SStefano Zampini /* shorter version of MatAssemblyEnd_SeqAIJ */ 31559566063dSJacob Faibussowitsch PetscCall(PetscInfo(C,"Matrix size: %" PetscInt_FMT " X %" PetscInt_FMT "; storage space: 0 unneeded,%" PetscInt_FMT " used\n",C->rmap->n,C->cmap->n,c->nz)); 31569566063dSJacob Faibussowitsch PetscCall(PetscInfo(C,"Number of mallocs during MatSetValues() is 0\n")); 31579566063dSJacob Faibussowitsch PetscCall(PetscInfo(C,"Maximum nonzeros in any row is %" PetscInt_FMT "\n",c->rmax)); 3158fcdce8c4SStefano Zampini c->reallocs = 0; 3159fcdce8c4SStefano Zampini C->info.mallocs += 0; 3160fcdce8c4SStefano Zampini C->info.nz_unneeded = 0; 3161fcdce8c4SStefano Zampini C->assembled = C->was_assembled = PETSC_TRUE; 3162fcdce8c4SStefano Zampini C->num_ass++; 3163ccdfe979SStefano Zampini PetscFunctionReturn(0); 3164ccdfe979SStefano Zampini } 3165fcdce8c4SStefano Zampini 3166fcdce8c4SStefano Zampini static PetscErrorCode MatProductSymbolic_SeqAIJCUSPARSE_SeqAIJCUSPARSE(Mat C) 3167fcdce8c4SStefano Zampini { 3168fcdce8c4SStefano Zampini Mat_Product *product = C->product; 3169fcdce8c4SStefano Zampini Mat A,B; 3170fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp,*Bcusp,*Ccusp; 3171fcdce8c4SStefano Zampini Mat_SeqAIJ *a,*b,*c; 3172fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Amat,*Bmat,*Cmat; 3173fcdce8c4SStefano Zampini CsrMatrix *Acsr,*Bcsr,*Ccsr; 3174fcdce8c4SStefano Zampini PetscInt i,j,m,n,k; 3175fcdce8c4SStefano Zampini PetscBool flg; 3176fcdce8c4SStefano Zampini cusparseStatus_t stat; 3177fcdce8c4SStefano Zampini MatProductType ptype; 3178fcdce8c4SStefano Zampini MatMatCusparse *mmdata; 3179fcdce8c4SStefano Zampini PetscLogDouble flops; 3180fcdce8c4SStefano Zampini PetscBool biscompressed,ciscompressed; 3181fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3182fcdce8c4SStefano Zampini int64_t C_num_rows1, C_num_cols1, C_nnz1; 3183fcdce8c4SStefano Zampini cusparseSpMatDescr_t BmatSpDescr; 3184fcdce8c4SStefano Zampini #else 3185fcdce8c4SStefano Zampini int cnz; 3186fcdce8c4SStefano Zampini #endif 3187b4285af6SJunchao Zhang cusparseOperation_t opA = CUSPARSE_OPERATION_NON_TRANSPOSE,opB = CUSPARSE_OPERATION_NON_TRANSPOSE; /* cuSPARSE spgemm doesn't support transpose yet */ 3188fcdce8c4SStefano Zampini 3189fcdce8c4SStefano Zampini PetscFunctionBegin; 3190fcdce8c4SStefano Zampini MatCheckProduct(C,1); 319128b400f6SJacob Faibussowitsch PetscCheck(!C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data not empty"); 3192fcdce8c4SStefano Zampini A = product->A; 3193fcdce8c4SStefano Zampini B = product->B; 31949566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg)); 319528b400f6SJacob Faibussowitsch PetscCheck(flg,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 31969566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)B,MATSEQAIJCUSPARSE,&flg)); 319728b400f6SJacob Faibussowitsch PetscCheck(flg,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for B of type %s",((PetscObject)B)->type_name); 3198fcdce8c4SStefano Zampini a = (Mat_SeqAIJ*)A->data; 3199fcdce8c4SStefano Zampini b = (Mat_SeqAIJ*)B->data; 3200fcdce8c4SStefano Zampini /* product data */ 32019566063dSJacob Faibussowitsch PetscCall(PetscNew(&mmdata)); 3202fcdce8c4SStefano Zampini C->product->data = mmdata; 3203fcdce8c4SStefano Zampini C->product->destroy = MatDestroy_MatMatCusparse; 3204fcdce8c4SStefano Zampini 32059566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 32069566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(B)); 3207d60bce21SJunchao Zhang Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr; /* Access spptr after MatSeqAIJCUSPARSECopyToGPU, not before */ 3208d60bce21SJunchao Zhang Bcusp = (Mat_SeqAIJCUSPARSE*)B->spptr; 320908401ef6SPierre Jolivet PetscCheck(Acusp->format == MAT_CUSPARSE_CSR,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 321008401ef6SPierre Jolivet PetscCheck(Bcusp->format == MAT_CUSPARSE_CSR,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 3211d60bce21SJunchao Zhang 3212fcdce8c4SStefano Zampini ptype = product->type; 3213fa046f9fSJunchao Zhang if (A->symmetric && ptype == MATPRODUCT_AtB) { 3214fa046f9fSJunchao Zhang ptype = MATPRODUCT_AB; 3215fa046f9fSJunchao Zhang product->symbolic_used_the_fact_A_is_symmetric = PETSC_TRUE; 3216fa046f9fSJunchao Zhang } 3217fa046f9fSJunchao Zhang if (B->symmetric && ptype == MATPRODUCT_ABt) { 3218fa046f9fSJunchao Zhang ptype = MATPRODUCT_AB; 3219fa046f9fSJunchao Zhang product->symbolic_used_the_fact_B_is_symmetric = PETSC_TRUE; 3220fa046f9fSJunchao Zhang } 3221fcdce8c4SStefano Zampini biscompressed = PETSC_FALSE; 3222fcdce8c4SStefano Zampini ciscompressed = PETSC_FALSE; 3223fcdce8c4SStefano Zampini switch (ptype) { 3224fcdce8c4SStefano Zampini case MATPRODUCT_AB: 3225fcdce8c4SStefano Zampini m = A->rmap->n; 3226fcdce8c4SStefano Zampini n = B->cmap->n; 3227fcdce8c4SStefano Zampini k = A->cmap->n; 3228fcdce8c4SStefano Zampini Amat = Acusp->mat; 3229fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 3230fcdce8c4SStefano Zampini if (a->compressedrow.use) ciscompressed = PETSC_TRUE; 3231fcdce8c4SStefano Zampini if (b->compressedrow.use) biscompressed = PETSC_TRUE; 3232fcdce8c4SStefano Zampini break; 3233fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 3234fcdce8c4SStefano Zampini m = A->cmap->n; 3235fcdce8c4SStefano Zampini n = B->cmap->n; 3236fcdce8c4SStefano Zampini k = A->rmap->n; 32379566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEFormExplicitTranspose(A)); 3238fcdce8c4SStefano Zampini Amat = Acusp->matTranspose; 3239fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 3240fcdce8c4SStefano Zampini if (b->compressedrow.use) biscompressed = PETSC_TRUE; 3241fcdce8c4SStefano Zampini break; 3242fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 3243fcdce8c4SStefano Zampini m = A->rmap->n; 3244fcdce8c4SStefano Zampini n = B->rmap->n; 3245fcdce8c4SStefano Zampini k = A->cmap->n; 32469566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEFormExplicitTranspose(B)); 3247fcdce8c4SStefano Zampini Amat = Acusp->mat; 3248fcdce8c4SStefano Zampini Bmat = Bcusp->matTranspose; 3249fcdce8c4SStefano Zampini if (a->compressedrow.use) ciscompressed = PETSC_TRUE; 3250fcdce8c4SStefano Zampini break; 3251fcdce8c4SStefano Zampini default: 325298921bdaSJacob Faibussowitsch SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 3253fcdce8c4SStefano Zampini } 3254fcdce8c4SStefano Zampini 3255fcdce8c4SStefano Zampini /* create cusparse matrix */ 32569566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C,m,n,m,n)); 32579566063dSJacob Faibussowitsch PetscCall(MatSetType(C,MATSEQAIJCUSPARSE)); 3258fcdce8c4SStefano Zampini c = (Mat_SeqAIJ*)C->data; 3259fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)C->spptr; 3260fcdce8c4SStefano Zampini Cmat = new Mat_SeqAIJCUSPARSEMultStruct; 3261fcdce8c4SStefano Zampini Ccsr = new CsrMatrix; 3262fcdce8c4SStefano Zampini 3263fcdce8c4SStefano Zampini c->compressedrow.use = ciscompressed; 3264fcdce8c4SStefano Zampini if (c->compressedrow.use) { /* if a is in compressed row, than c will be in compressed row format */ 3265fcdce8c4SStefano Zampini c->compressedrow.nrows = a->compressedrow.nrows; 32669566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(c->compressedrow.nrows+1,&c->compressedrow.i,c->compressedrow.nrows,&c->compressedrow.rindex)); 32679566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(c->compressedrow.rindex,a->compressedrow.rindex,c->compressedrow.nrows)); 3268fcdce8c4SStefano Zampini Ccusp->workVector = new THRUSTARRAY(c->compressedrow.nrows); 3269fcdce8c4SStefano Zampini Cmat->cprowIndices = new THRUSTINTARRAY(c->compressedrow.nrows); 3270fcdce8c4SStefano Zampini Cmat->cprowIndices->assign(c->compressedrow.rindex,c->compressedrow.rindex + c->compressedrow.nrows); 3271fcdce8c4SStefano Zampini } else { 3272fcdce8c4SStefano Zampini c->compressedrow.nrows = 0; 3273fcdce8c4SStefano Zampini c->compressedrow.i = NULL; 3274fcdce8c4SStefano Zampini c->compressedrow.rindex = NULL; 3275fcdce8c4SStefano Zampini Ccusp->workVector = NULL; 3276fcdce8c4SStefano Zampini Cmat->cprowIndices = NULL; 3277fcdce8c4SStefano Zampini } 3278fcdce8c4SStefano Zampini Ccusp->nrows = ciscompressed ? c->compressedrow.nrows : m; 3279fcdce8c4SStefano Zampini Ccusp->mat = Cmat; 3280fcdce8c4SStefano Zampini Ccusp->mat->mat = Ccsr; 3281fcdce8c4SStefano Zampini Ccsr->num_rows = Ccusp->nrows; 3282fcdce8c4SStefano Zampini Ccsr->num_cols = n; 3283fcdce8c4SStefano Zampini Ccsr->row_offsets = new THRUSTINTARRAY32(Ccusp->nrows+1); 32849566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&Cmat->descr)); 32859566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(Cmat->descr, CUSPARSE_INDEX_BASE_ZERO)); 32869566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(Cmat->descr, CUSPARSE_MATRIX_TYPE_GENERAL)); 32879566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(Cmat->alpha_one),sizeof(PetscScalar))); 32889566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(Cmat->beta_zero),sizeof(PetscScalar))); 32899566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(Cmat->beta_one), sizeof(PetscScalar))); 32909566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(Cmat->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice)); 32919566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(Cmat->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice)); 32929566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(Cmat->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice)); 3293fcdce8c4SStefano Zampini if (!Ccsr->num_rows || !Ccsr->num_cols || !a->nz || !b->nz) { /* cusparse raise errors in different calls when matrices have zero rows/columns! */ 3294fcdce8c4SStefano Zampini thrust::fill(thrust::device,Ccsr->row_offsets->begin(),Ccsr->row_offsets->end(),0); 3295fcdce8c4SStefano Zampini c->nz = 0; 3296fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 3297fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 3298fcdce8c4SStefano Zampini goto finalizesym; 3299fcdce8c4SStefano Zampini } 3300fcdce8c4SStefano Zampini 330128b400f6SJacob Faibussowitsch PetscCheck(Amat,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A mult struct for product type %s",MatProductTypes[ptype]); 330228b400f6SJacob Faibussowitsch PetscCheck(Bmat,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B mult struct for product type %s",MatProductTypes[ptype]); 3303fcdce8c4SStefano Zampini Acsr = (CsrMatrix*)Amat->mat; 3304fcdce8c4SStefano Zampini if (!biscompressed) { 3305fcdce8c4SStefano Zampini Bcsr = (CsrMatrix*)Bmat->mat; 3306fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3307fcdce8c4SStefano Zampini BmatSpDescr = Bmat->matDescr; 3308fcdce8c4SStefano Zampini #endif 3309fcdce8c4SStefano Zampini } else { /* we need to use row offsets for the full matrix */ 3310fcdce8c4SStefano Zampini CsrMatrix *cBcsr = (CsrMatrix*)Bmat->mat; 3311fcdce8c4SStefano Zampini Bcsr = new CsrMatrix; 3312fcdce8c4SStefano Zampini Bcsr->num_rows = B->rmap->n; 3313fcdce8c4SStefano Zampini Bcsr->num_cols = cBcsr->num_cols; 3314fcdce8c4SStefano Zampini Bcsr->num_entries = cBcsr->num_entries; 3315fcdce8c4SStefano Zampini Bcsr->column_indices = cBcsr->column_indices; 3316fcdce8c4SStefano Zampini Bcsr->values = cBcsr->values; 3317fcdce8c4SStefano Zampini if (!Bcusp->rowoffsets_gpu) { 3318fcdce8c4SStefano Zampini Bcusp->rowoffsets_gpu = new THRUSTINTARRAY32(B->rmap->n + 1); 3319fcdce8c4SStefano Zampini Bcusp->rowoffsets_gpu->assign(b->i,b->i + B->rmap->n + 1); 33209566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu((B->rmap->n + 1)*sizeof(PetscInt))); 3321fcdce8c4SStefano Zampini } 3322fcdce8c4SStefano Zampini Bcsr->row_offsets = Bcusp->rowoffsets_gpu; 3323fcdce8c4SStefano Zampini mmdata->Bcsr = Bcsr; 3324fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3325fcdce8c4SStefano Zampini if (Bcsr->num_rows && Bcsr->num_cols) { 3326fcdce8c4SStefano Zampini stat = cusparseCreateCsr(&mmdata->matSpBDescr, Bcsr->num_rows, Bcsr->num_cols, Bcsr->num_entries, 3327fcdce8c4SStefano Zampini Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 3328fcdce8c4SStefano Zampini Bcsr->values->data().get(), 3329fcdce8c4SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 33309566063dSJacob Faibussowitsch CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);PetscCallCUSPARSE(stat); 3331fcdce8c4SStefano Zampini } 3332fcdce8c4SStefano Zampini BmatSpDescr = mmdata->matSpBDescr; 3333fcdce8c4SStefano Zampini #endif 3334fcdce8c4SStefano Zampini } 333528b400f6SJacob Faibussowitsch PetscCheck(Acsr,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A CSR struct"); 333628b400f6SJacob Faibussowitsch PetscCheck(Bcsr,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B CSR struct"); 3337fcdce8c4SStefano Zampini /* precompute flops count */ 3338fcdce8c4SStefano Zampini if (ptype == MATPRODUCT_AB) { 3339fcdce8c4SStefano Zampini for (i=0, flops = 0; i<A->rmap->n; i++) { 3340fcdce8c4SStefano Zampini const PetscInt st = a->i[i]; 3341fcdce8c4SStefano Zampini const PetscInt en = a->i[i+1]; 3342fcdce8c4SStefano Zampini for (j=st; j<en; j++) { 3343fcdce8c4SStefano Zampini const PetscInt brow = a->j[j]; 3344fcdce8c4SStefano Zampini flops += 2.*(b->i[brow+1] - b->i[brow]); 3345fcdce8c4SStefano Zampini } 3346fcdce8c4SStefano Zampini } 3347fcdce8c4SStefano Zampini } else if (ptype == MATPRODUCT_AtB) { 3348fcdce8c4SStefano Zampini for (i=0, flops = 0; i<A->rmap->n; i++) { 3349fcdce8c4SStefano Zampini const PetscInt anzi = a->i[i+1] - a->i[i]; 3350fcdce8c4SStefano Zampini const PetscInt bnzi = b->i[i+1] - b->i[i]; 3351fcdce8c4SStefano Zampini flops += (2.*anzi)*bnzi; 3352fcdce8c4SStefano Zampini } 3353fcdce8c4SStefano Zampini } else { /* TODO */ 3354fcdce8c4SStefano Zampini flops = 0.; 3355fcdce8c4SStefano Zampini } 3356fcdce8c4SStefano Zampini 3357fcdce8c4SStefano Zampini mmdata->flops = flops; 33589566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 3359b4285af6SJunchao Zhang 3360fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 33619566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_DEVICE)); 3362fcdce8c4SStefano Zampini stat = cusparseCreateCsr(&Cmat->matDescr, Ccsr->num_rows, Ccsr->num_cols, 0, 3363fcdce8c4SStefano Zampini NULL, NULL, NULL, 3364fcdce8c4SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 33659566063dSJacob Faibussowitsch CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);PetscCallCUSPARSE(stat); 33669566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSpGEMM_createDescr(&mmdata->spgemmDesc)); 3367b4285af6SJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,4,0) 3368b4285af6SJunchao Zhang { 3369b4285af6SJunchao Zhang /* cusparseSpGEMMreuse has more reasonable APIs than cusparseSpGEMM, so we prefer to use it. 3370b4285af6SJunchao Zhang We follow the sample code at https://github.com/NVIDIA/CUDALibrarySamples/blob/master/cuSPARSE/spgemm_reuse 3371b4285af6SJunchao Zhang */ 3372b4285af6SJunchao Zhang void* dBuffer1 = NULL; 3373b4285af6SJunchao Zhang void* dBuffer2 = NULL; 3374b4285af6SJunchao Zhang void* dBuffer3 = NULL; 3375b4285af6SJunchao Zhang /* dBuffer4, dBuffer5 are needed by cusparseSpGEMMreuse_compute, and therefore are stored in mmdata */ 3376b4285af6SJunchao Zhang size_t bufferSize1 = 0; 3377b4285af6SJunchao Zhang size_t bufferSize2 = 0; 3378b4285af6SJunchao Zhang size_t bufferSize3 = 0; 3379b4285af6SJunchao Zhang size_t bufferSize4 = 0; 3380b4285af6SJunchao Zhang size_t bufferSize5 = 0; 3381b4285af6SJunchao Zhang 3382b4285af6SJunchao Zhang /*----------------------------------------------------------------------*/ 3383b4285af6SJunchao Zhang /* ask bufferSize1 bytes for external memory */ 3384b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_workEstimation(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, 3385b4285af6SJunchao Zhang CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, 33869566063dSJacob Faibussowitsch &bufferSize1, NULL);PetscCallCUSPARSE(stat); 33879566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void**) &dBuffer1, bufferSize1)); 3388b4285af6SJunchao Zhang /* inspect the matrices A and B to understand the memory requirement for the next step */ 3389b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_workEstimation(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, 3390b4285af6SJunchao Zhang CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, 33919566063dSJacob Faibussowitsch &bufferSize1, dBuffer1);PetscCallCUSPARSE(stat); 3392b4285af6SJunchao Zhang 3393b4285af6SJunchao Zhang /*----------------------------------------------------------------------*/ 3394b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_nnz(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, 3395b4285af6SJunchao Zhang CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, 33969566063dSJacob Faibussowitsch &bufferSize2, NULL, &bufferSize3, NULL, &bufferSize4, NULL);PetscCallCUSPARSE(stat); 33979566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void**) &dBuffer2, bufferSize2)); 33989566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void**) &dBuffer3, bufferSize3)); 33999566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void**) &mmdata->dBuffer4, bufferSize4)); 3400b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_nnz(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, 3401b4285af6SJunchao Zhang CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, 34029566063dSJacob Faibussowitsch &bufferSize2, dBuffer2, &bufferSize3, dBuffer3, &bufferSize4, mmdata->dBuffer4);PetscCallCUSPARSE(stat); 34039566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(dBuffer1)); 34049566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(dBuffer2)); 3405b4285af6SJunchao Zhang 3406b4285af6SJunchao Zhang /*----------------------------------------------------------------------*/ 3407b4285af6SJunchao Zhang /* get matrix C non-zero entries C_nnz1 */ 34089566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSpMatGetSize(Cmat->matDescr, &C_num_rows1, &C_num_cols1, &C_nnz1)); 3409b4285af6SJunchao Zhang c->nz = (PetscInt) C_nnz1; 3410b4285af6SJunchao Zhang /* allocate matrix C */ 34119566063dSJacob Faibussowitsch Ccsr->column_indices = new THRUSTINTARRAY32(c->nz);PetscCallCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 34129566063dSJacob Faibussowitsch Ccsr->values = new THRUSTARRAY(c->nz);PetscCallCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 3413b4285af6SJunchao Zhang /* update matC with the new pointers */ 3414b4285af6SJunchao Zhang stat = cusparseCsrSetPointers(Cmat->matDescr, Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get(), 34159566063dSJacob Faibussowitsch Ccsr->values->data().get());PetscCallCUSPARSE(stat); 3416b4285af6SJunchao Zhang 3417b4285af6SJunchao Zhang /*----------------------------------------------------------------------*/ 3418b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_copy(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, 3419b4285af6SJunchao Zhang CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, 34209566063dSJacob Faibussowitsch &bufferSize5, NULL);PetscCallCUSPARSE(stat); 34219566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void**) &mmdata->dBuffer5, bufferSize5)); 3422b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_copy(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, 3423b4285af6SJunchao Zhang CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, 34249566063dSJacob Faibussowitsch &bufferSize5, mmdata->dBuffer5);PetscCallCUSPARSE(stat); 34259566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(dBuffer3)); 3426b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_compute(Ccusp->handle, opA, opB, 3427b4285af6SJunchao Zhang Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 3428b4285af6SJunchao Zhang cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 34299566063dSJacob Faibussowitsch mmdata->spgemmDesc);PetscCallCUSPARSE(stat); 34309566063dSJacob Faibussowitsch PetscCall(PetscInfo(C,"Buffer sizes for type %s, result %" PetscInt_FMT " x %" PetscInt_FMT " (k %" PetscInt_FMT ", nzA %" PetscInt_FMT ", nzB %" PetscInt_FMT ", nzC %" PetscInt_FMT ") are: %ldKB %ldKB\n",MatProductTypes[ptype],m,n,k,a->nz,b->nz,c->nz,bufferSize4/1024,bufferSize5/1024)); 3431b4285af6SJunchao Zhang } 3432ae37ee31SJunchao Zhang #else 3433b4285af6SJunchao Zhang size_t bufSize2; 3434fcdce8c4SStefano Zampini /* ask bufferSize bytes for external memory */ 3435b4285af6SJunchao Zhang stat = cusparseSpGEMM_workEstimation(Ccusp->handle, opA, opB, 3436fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 3437fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 34389566063dSJacob Faibussowitsch mmdata->spgemmDesc, &bufSize2, NULL);PetscCallCUSPARSE(stat); 34399566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void**) &mmdata->mmBuffer2, bufSize2)); 3440fcdce8c4SStefano Zampini /* inspect the matrices A and B to understand the memory requirement for the next step */ 3441b4285af6SJunchao Zhang stat = cusparseSpGEMM_workEstimation(Ccusp->handle, opA, opB, 3442fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 3443fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 34449566063dSJacob Faibussowitsch mmdata->spgemmDesc, &bufSize2, mmdata->mmBuffer2);PetscCallCUSPARSE(stat); 3445fcdce8c4SStefano Zampini /* ask bufferSize again bytes for external memory */ 3446b4285af6SJunchao Zhang stat = cusparseSpGEMM_compute(Ccusp->handle, opA, opB, 3447fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 3448fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 34499566063dSJacob Faibussowitsch mmdata->spgemmDesc, &mmdata->mmBufferSize, NULL);PetscCallCUSPARSE(stat); 3450fcdce8c4SStefano Zampini /* The CUSPARSE documentation is not clear, nor the API 3451fcdce8c4SStefano Zampini We need both buffers to perform the operations properly! 3452fcdce8c4SStefano Zampini mmdata->mmBuffer2 does not appear anywhere in the compute/copy API 3453fcdce8c4SStefano Zampini it only appears for the workEstimation stuff, but it seems it is needed in compute, so probably the address 3454fcdce8c4SStefano Zampini is stored in the descriptor! What a messy API... */ 34559566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void**) &mmdata->mmBuffer, mmdata->mmBufferSize)); 3456fcdce8c4SStefano Zampini /* compute the intermediate product of A * B */ 3457b4285af6SJunchao Zhang stat = cusparseSpGEMM_compute(Ccusp->handle, opA, opB, 3458fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 3459fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 34609566063dSJacob Faibussowitsch mmdata->spgemmDesc, &mmdata->mmBufferSize, mmdata->mmBuffer);PetscCallCUSPARSE(stat); 3461fcdce8c4SStefano Zampini /* get matrix C non-zero entries C_nnz1 */ 34629566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSpMatGetSize(Cmat->matDescr, &C_num_rows1, &C_num_cols1, &C_nnz1)); 3463fcdce8c4SStefano Zampini c->nz = (PetscInt) C_nnz1; 34649566063dSJacob Faibussowitsch PetscCall(PetscInfo(C,"Buffer sizes for type %s, result %" PetscInt_FMT " x %" PetscInt_FMT " (k %" PetscInt_FMT ", nzA %" PetscInt_FMT ", nzB %" PetscInt_FMT ", nzC %" PetscInt_FMT ") are: %ldKB %ldKB\n",MatProductTypes[ptype],m,n,k,a->nz,b->nz,c->nz,bufSize2/1024,mmdata->mmBufferSize/1024)); 3465fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 34669566063dSJacob Faibussowitsch PetscCallCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 3467fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 34689566063dSJacob Faibussowitsch PetscCallCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 3469fcdce8c4SStefano Zampini stat = cusparseCsrSetPointers(Cmat->matDescr, Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get(), 34709566063dSJacob Faibussowitsch Ccsr->values->data().get());PetscCallCUSPARSE(stat); 3471b4285af6SJunchao Zhang stat = cusparseSpGEMM_copy(Ccusp->handle, opA, opB, 3472fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 34739566063dSJacob Faibussowitsch cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc);PetscCallCUSPARSE(stat); 3474ae37ee31SJunchao Zhang #endif // PETSC_PKG_CUDA_VERSION_GE(11,4,0) 3475fcdce8c4SStefano Zampini #else 34769566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_HOST)); 3477b4285af6SJunchao Zhang stat = cusparseXcsrgemmNnz(Ccusp->handle, opA, opB, 3478fcdce8c4SStefano Zampini Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, 3479fcdce8c4SStefano Zampini Amat->descr, Acsr->num_entries, Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), 3480fcdce8c4SStefano Zampini Bmat->descr, Bcsr->num_entries, Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 34819566063dSJacob Faibussowitsch Cmat->descr, Ccsr->row_offsets->data().get(), &cnz);PetscCallCUSPARSE(stat); 3482fcdce8c4SStefano Zampini c->nz = cnz; 3483fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 34849566063dSJacob Faibussowitsch PetscCallCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 3485fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 34869566063dSJacob Faibussowitsch PetscCallCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 3487fcdce8c4SStefano Zampini 34889566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_DEVICE)); 3489fcdce8c4SStefano Zampini /* with the old gemm interface (removed from 11.0 on) we cannot compute the symbolic factorization only. 3490fcdce8c4SStefano Zampini I have tried using the gemm2 interface (alpha * A * B + beta * D), which allows to do symbolic by passing NULL for values, but it seems quite buggy when 3491fcdce8c4SStefano Zampini D is NULL, despite the fact that CUSPARSE documentation claims it is supported! */ 3492b4285af6SJunchao Zhang stat = cusparse_csr_spgemm(Ccusp->handle, opA, opB, 3493fcdce8c4SStefano Zampini Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, 3494fcdce8c4SStefano Zampini Amat->descr, Acsr->num_entries, Acsr->values->data().get(), Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), 3495fcdce8c4SStefano Zampini Bmat->descr, Bcsr->num_entries, Bcsr->values->data().get(), Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 34969566063dSJacob Faibussowitsch Cmat->descr, Ccsr->values->data().get(), Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get());PetscCallCUSPARSE(stat); 3497fcdce8c4SStefano Zampini #endif 34989566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(mmdata->flops)); 34999566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 3500fcdce8c4SStefano Zampini finalizesym: 3501fcdce8c4SStefano Zampini c->singlemalloc = PETSC_FALSE; 3502fcdce8c4SStefano Zampini c->free_a = PETSC_TRUE; 3503fcdce8c4SStefano Zampini c->free_ij = PETSC_TRUE; 35049566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m+1,&c->i)); 35059566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(c->nz,&c->j)); 3506fcdce8c4SStefano Zampini if (PetscDefined(USE_64BIT_INDICES)) { /* 32 to 64 bit conversion on the GPU and then copy to host (lazy) */ 3507fcdce8c4SStefano Zampini PetscInt *d_i = c->i; 3508fcdce8c4SStefano Zampini THRUSTINTARRAY ii(Ccsr->row_offsets->size()); 3509fcdce8c4SStefano Zampini THRUSTINTARRAY jj(Ccsr->column_indices->size()); 3510fcdce8c4SStefano Zampini ii = *Ccsr->row_offsets; 3511fcdce8c4SStefano Zampini jj = *Ccsr->column_indices; 3512fcdce8c4SStefano Zampini if (ciscompressed) d_i = c->compressedrow.i; 35139566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(d_i,ii.data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost)); 35149566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(c->j,jj.data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost)); 3515fcdce8c4SStefano Zampini } else { 3516fcdce8c4SStefano Zampini PetscInt *d_i = c->i; 3517fcdce8c4SStefano Zampini if (ciscompressed) d_i = c->compressedrow.i; 35189566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(d_i,Ccsr->row_offsets->data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost)); 35199566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(c->j,Ccsr->column_indices->data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost)); 3520fcdce8c4SStefano Zampini } 3521fcdce8c4SStefano Zampini if (ciscompressed) { /* need to expand host row offsets */ 3522fcdce8c4SStefano Zampini PetscInt r = 0; 3523fcdce8c4SStefano Zampini c->i[0] = 0; 3524fcdce8c4SStefano Zampini for (k = 0; k < c->compressedrow.nrows; k++) { 3525fcdce8c4SStefano Zampini const PetscInt next = c->compressedrow.rindex[k]; 3526fcdce8c4SStefano Zampini const PetscInt old = c->compressedrow.i[k]; 3527fcdce8c4SStefano Zampini for (; r < next; r++) c->i[r+1] = old; 3528fcdce8c4SStefano Zampini } 3529fcdce8c4SStefano Zampini for (; r < m; r++) c->i[r+1] = c->compressedrow.i[c->compressedrow.nrows]; 3530fcdce8c4SStefano Zampini } 35319566063dSJacob Faibussowitsch PetscCall(PetscLogGpuToCpu((Ccsr->column_indices->size() + Ccsr->row_offsets->size())*sizeof(PetscInt))); 35329566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m,&c->ilen)); 35339566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m,&c->imax)); 3534fcdce8c4SStefano Zampini c->maxnz = c->nz; 3535fcdce8c4SStefano Zampini c->nonzerorowcnt = 0; 3536fcdce8c4SStefano Zampini c->rmax = 0; 3537fcdce8c4SStefano Zampini for (k = 0; k < m; k++) { 3538fcdce8c4SStefano Zampini const PetscInt nn = c->i[k+1] - c->i[k]; 3539fcdce8c4SStefano Zampini c->ilen[k] = c->imax[k] = nn; 3540fcdce8c4SStefano Zampini c->nonzerorowcnt += (PetscInt)!!nn; 3541fcdce8c4SStefano Zampini c->rmax = PetscMax(c->rmax,nn); 3542fcdce8c4SStefano Zampini } 35439566063dSJacob Faibussowitsch PetscCall(MatMarkDiagonal_SeqAIJ(C)); 35449566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(c->nz,&c->a)); 3545fcdce8c4SStefano Zampini Ccsr->num_entries = c->nz; 3546fcdce8c4SStefano Zampini 3547fcdce8c4SStefano Zampini C->nonzerostate++; 35489566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(C->rmap)); 35499566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(C->cmap)); 3550fcdce8c4SStefano Zampini Ccusp->nonzerostate = C->nonzerostate; 3551fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_UNALLOCATED; 3552fcdce8c4SStefano Zampini C->preallocated = PETSC_TRUE; 3553fcdce8c4SStefano Zampini C->assembled = PETSC_FALSE; 3554fcdce8c4SStefano Zampini C->was_assembled = PETSC_FALSE; 3555abb89eb1SStefano Zampini if (product->api_user && A->offloadmask == PETSC_OFFLOAD_BOTH && B->offloadmask == PETSC_OFFLOAD_BOTH) { /* flag the matrix C values as computed, so that the numeric phase will only call MatAssembly */ 3556fcdce8c4SStefano Zampini mmdata->reusesym = PETSC_TRUE; 3557fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_GPU; 3558fcdce8c4SStefano Zampini } 3559fcdce8c4SStefano Zampini C->ops->productnumeric = MatProductNumeric_SeqAIJCUSPARSE_SeqAIJCUSPARSE; 3560fcdce8c4SStefano Zampini PetscFunctionReturn(0); 3561fcdce8c4SStefano Zampini } 3562fcdce8c4SStefano Zampini 3563fcdce8c4SStefano Zampini PETSC_INTERN PetscErrorCode MatProductSetFromOptions_SeqAIJ_SeqDense(Mat); 3564fcdce8c4SStefano Zampini 3565fcdce8c4SStefano Zampini /* handles sparse or dense B */ 3566fcdce8c4SStefano Zampini static PetscErrorCode MatProductSetFromOptions_SeqAIJCUSPARSE(Mat mat) 3567fcdce8c4SStefano Zampini { 3568fcdce8c4SStefano Zampini Mat_Product *product = mat->product; 3569fcdce8c4SStefano Zampini PetscBool isdense = PETSC_FALSE,Biscusp = PETSC_FALSE,Ciscusp = PETSC_TRUE; 3570fcdce8c4SStefano Zampini 3571fcdce8c4SStefano Zampini PetscFunctionBegin; 3572fcdce8c4SStefano Zampini MatCheckProduct(mat,1); 35739566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)product->B,MATSEQDENSE,&isdense)); 3574abb89eb1SStefano Zampini if (!product->A->boundtocpu && !product->B->boundtocpu) { 35759566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)product->B,MATSEQAIJCUSPARSE,&Biscusp)); 3576fcdce8c4SStefano Zampini } 3577fcdce8c4SStefano Zampini if (product->type == MATPRODUCT_ABC) { 3578fcdce8c4SStefano Zampini Ciscusp = PETSC_FALSE; 3579fcdce8c4SStefano Zampini if (!product->C->boundtocpu) { 35809566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)product->C,MATSEQAIJCUSPARSE,&Ciscusp)); 3581fcdce8c4SStefano Zampini } 3582fcdce8c4SStefano Zampini } 358365e4b4d4SStefano Zampini if (Biscusp && Ciscusp) { /* we can always select the CPU backend */ 358465e4b4d4SStefano Zampini PetscBool usecpu = PETSC_FALSE; 358565e4b4d4SStefano Zampini switch (product->type) { 358665e4b4d4SStefano Zampini case MATPRODUCT_AB: 358765e4b4d4SStefano Zampini if (product->api_user) { 3588d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatMatMult","Mat"); 35899566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-matmatmult_backend_cpu","Use CPU code","MatMatMult",usecpu,&usecpu,NULL)); 3590d0609cedSBarry Smith PetscOptionsEnd(); 359165e4b4d4SStefano Zampini } else { 3592d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatProduct_AB","Mat"); 35939566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mat_product_algorithm_backend_cpu","Use CPU code","MatMatMult",usecpu,&usecpu,NULL)); 3594d0609cedSBarry Smith PetscOptionsEnd(); 359565e4b4d4SStefano Zampini } 359665e4b4d4SStefano Zampini break; 359765e4b4d4SStefano Zampini case MATPRODUCT_AtB: 359865e4b4d4SStefano Zampini if (product->api_user) { 3599d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatTransposeMatMult","Mat"); 36009566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mattransposematmult_backend_cpu","Use CPU code","MatTransposeMatMult",usecpu,&usecpu,NULL)); 3601d0609cedSBarry Smith PetscOptionsEnd(); 360265e4b4d4SStefano Zampini } else { 3603d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatProduct_AtB","Mat"); 36049566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mat_product_algorithm_backend_cpu","Use CPU code","MatTransposeMatMult",usecpu,&usecpu,NULL)); 3605d0609cedSBarry Smith PetscOptionsEnd(); 360665e4b4d4SStefano Zampini } 360765e4b4d4SStefano Zampini break; 360865e4b4d4SStefano Zampini case MATPRODUCT_PtAP: 360965e4b4d4SStefano Zampini if (product->api_user) { 3610d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatPtAP","Mat"); 36119566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-matptap_backend_cpu","Use CPU code","MatPtAP",usecpu,&usecpu,NULL)); 3612d0609cedSBarry Smith PetscOptionsEnd(); 361365e4b4d4SStefano Zampini } else { 3614d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatProduct_PtAP","Mat"); 36159566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mat_product_algorithm_backend_cpu","Use CPU code","MatPtAP",usecpu,&usecpu,NULL)); 3616d0609cedSBarry Smith PetscOptionsEnd(); 361765e4b4d4SStefano Zampini } 361865e4b4d4SStefano Zampini break; 361965e4b4d4SStefano Zampini case MATPRODUCT_RARt: 362065e4b4d4SStefano Zampini if (product->api_user) { 3621d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatRARt","Mat"); 36229566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-matrart_backend_cpu","Use CPU code","MatRARt",usecpu,&usecpu,NULL)); 3623d0609cedSBarry Smith PetscOptionsEnd(); 362465e4b4d4SStefano Zampini } else { 3625d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatProduct_RARt","Mat"); 36269566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mat_product_algorithm_backend_cpu","Use CPU code","MatRARt",usecpu,&usecpu,NULL)); 3627d0609cedSBarry Smith PetscOptionsEnd(); 362865e4b4d4SStefano Zampini } 362965e4b4d4SStefano Zampini break; 363065e4b4d4SStefano Zampini case MATPRODUCT_ABC: 363165e4b4d4SStefano Zampini if (product->api_user) { 3632d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatMatMatMult","Mat"); 36339566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-matmatmatmult_backend_cpu","Use CPU code","MatMatMatMult",usecpu,&usecpu,NULL)); 3634d0609cedSBarry Smith PetscOptionsEnd(); 363565e4b4d4SStefano Zampini } else { 3636d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatProduct_ABC","Mat"); 36379566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mat_product_algorithm_backend_cpu","Use CPU code","MatMatMatMult",usecpu,&usecpu,NULL)); 3638d0609cedSBarry Smith PetscOptionsEnd(); 363965e4b4d4SStefano Zampini } 364065e4b4d4SStefano Zampini break; 364165e4b4d4SStefano Zampini default: 364265e4b4d4SStefano Zampini break; 364365e4b4d4SStefano Zampini } 364465e4b4d4SStefano Zampini if (usecpu) Biscusp = Ciscusp = PETSC_FALSE; 364565e4b4d4SStefano Zampini } 364665e4b4d4SStefano Zampini /* dispatch */ 3647fcdce8c4SStefano Zampini if (isdense) { 3648ccdfe979SStefano Zampini switch (product->type) { 3649ccdfe979SStefano Zampini case MATPRODUCT_AB: 3650ccdfe979SStefano Zampini case MATPRODUCT_AtB: 3651ccdfe979SStefano Zampini case MATPRODUCT_ABt: 3652ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 3653ccdfe979SStefano Zampini case MATPRODUCT_RARt: 3654fcdce8c4SStefano Zampini if (product->A->boundtocpu) { 36559566063dSJacob Faibussowitsch PetscCall(MatProductSetFromOptions_SeqAIJ_SeqDense(mat)); 3656fcdce8c4SStefano Zampini } else { 3657fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_SeqAIJCUSPARSE_SeqDENSECUDA; 3658fcdce8c4SStefano Zampini } 3659fcdce8c4SStefano Zampini break; 3660fcdce8c4SStefano Zampini case MATPRODUCT_ABC: 3661fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_ABC_Basic; 3662fcdce8c4SStefano Zampini break; 3663ccdfe979SStefano Zampini default: 3664ccdfe979SStefano Zampini break; 3665ccdfe979SStefano Zampini } 3666fcdce8c4SStefano Zampini } else if (Biscusp && Ciscusp) { 3667fcdce8c4SStefano Zampini switch (product->type) { 3668fcdce8c4SStefano Zampini case MATPRODUCT_AB: 3669fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 3670fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 3671fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_SeqAIJCUSPARSE_SeqAIJCUSPARSE; 3672fcdce8c4SStefano Zampini break; 3673fcdce8c4SStefano Zampini case MATPRODUCT_PtAP: 3674fcdce8c4SStefano Zampini case MATPRODUCT_RARt: 3675fcdce8c4SStefano Zampini case MATPRODUCT_ABC: 3676fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_ABC_Basic; 3677fcdce8c4SStefano Zampini break; 3678fcdce8c4SStefano Zampini default: 3679fcdce8c4SStefano Zampini break; 3680fcdce8c4SStefano Zampini } 3681fcdce8c4SStefano Zampini } else { /* fallback for AIJ */ 36829566063dSJacob Faibussowitsch PetscCall(MatProductSetFromOptions_SeqAIJ(mat)); 3683fcdce8c4SStefano Zampini } 3684ccdfe979SStefano Zampini PetscFunctionReturn(0); 3685ccdfe979SStefano Zampini } 3686ccdfe979SStefano Zampini 36876fa9248bSJed Brown static PetscErrorCode MatMult_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy) 36889ae82921SPaul Mullowney { 36899ae82921SPaul Mullowney PetscFunctionBegin; 36909566063dSJacob Faibussowitsch PetscCall(MatMultAddKernel_SeqAIJCUSPARSE(A,xx,NULL,yy,PETSC_FALSE,PETSC_FALSE)); 3691e6e9a74fSStefano Zampini PetscFunctionReturn(0); 3692e6e9a74fSStefano Zampini } 3693e6e9a74fSStefano Zampini 3694e6e9a74fSStefano Zampini static PetscErrorCode MatMultAdd_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy, Vec zz) 3695e6e9a74fSStefano Zampini { 3696e6e9a74fSStefano Zampini PetscFunctionBegin; 36979566063dSJacob Faibussowitsch PetscCall(MatMultAddKernel_SeqAIJCUSPARSE(A,xx,yy,zz,PETSC_FALSE,PETSC_FALSE)); 3698e6e9a74fSStefano Zampini PetscFunctionReturn(0); 3699e6e9a74fSStefano Zampini } 3700e6e9a74fSStefano Zampini 3701e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTranspose_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy) 3702e6e9a74fSStefano Zampini { 3703e6e9a74fSStefano Zampini PetscFunctionBegin; 37049566063dSJacob Faibussowitsch PetscCall(MatMultAddKernel_SeqAIJCUSPARSE(A,xx,NULL,yy,PETSC_TRUE,PETSC_TRUE)); 3705e6e9a74fSStefano Zampini PetscFunctionReturn(0); 3706e6e9a74fSStefano Zampini } 3707e6e9a74fSStefano Zampini 3708e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTransposeAdd_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy,Vec zz) 3709e6e9a74fSStefano Zampini { 3710e6e9a74fSStefano Zampini PetscFunctionBegin; 37119566063dSJacob Faibussowitsch PetscCall(MatMultAddKernel_SeqAIJCUSPARSE(A,xx,yy,zz,PETSC_TRUE,PETSC_TRUE)); 37129ae82921SPaul Mullowney PetscFunctionReturn(0); 37139ae82921SPaul Mullowney } 37149ae82921SPaul Mullowney 37156fa9248bSJed Brown static PetscErrorCode MatMultTranspose_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy) 3716ca45077fSPaul Mullowney { 3717ca45077fSPaul Mullowney PetscFunctionBegin; 37189566063dSJacob Faibussowitsch PetscCall(MatMultAddKernel_SeqAIJCUSPARSE(A,xx,NULL,yy,PETSC_TRUE,PETSC_FALSE)); 3719ca45077fSPaul Mullowney PetscFunctionReturn(0); 3720ca45077fSPaul Mullowney } 3721ca45077fSPaul Mullowney 3722a0e72f99SJunchao Zhang __global__ static void ScatterAdd(PetscInt n, PetscInt *idx,const PetscScalar *x,PetscScalar *y) 3723a0e72f99SJunchao Zhang { 3724a0e72f99SJunchao Zhang int i = blockIdx.x*blockDim.x + threadIdx.x; 3725a0e72f99SJunchao Zhang if (i < n) y[idx[i]] += x[i]; 3726a0e72f99SJunchao Zhang } 3727a0e72f99SJunchao Zhang 3728afb2bd1cSJunchao Zhang /* z = op(A) x + y. If trans & !herm, op = ^T; if trans & herm, op = ^H; if !trans, op = no-op */ 3729e6e9a74fSStefano Zampini static PetscErrorCode MatMultAddKernel_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy,Vec zz,PetscBool trans,PetscBool herm) 37309ae82921SPaul Mullowney { 37319ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 3732aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 37339ff858a8SKarl Rupp Mat_SeqAIJCUSPARSEMultStruct *matstruct; 3734e6e9a74fSStefano Zampini PetscScalar *xarray,*zarray,*dptr,*beta,*xptr; 3735e6e9a74fSStefano Zampini cusparseOperation_t opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 3736e6e9a74fSStefano Zampini PetscBool compressed; 3737afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3738afb2bd1cSJunchao Zhang PetscInt nx,ny; 3739afb2bd1cSJunchao Zhang #endif 37406e111a19SKarl Rupp 37419ae82921SPaul Mullowney PetscFunctionBegin; 374208401ef6SPierre Jolivet PetscCheck(!herm || trans,PetscObjectComm((PetscObject)A),PETSC_ERR_GPU,"Hermitian and not transpose not supported"); 3743cbc6b225SStefano Zampini if (!a->nz) { 37449566063dSJacob Faibussowitsch if (!yy) PetscCall(VecSet_SeqCUDA(zz,0)); 37459566063dSJacob Faibussowitsch else PetscCall(VecCopy_SeqCUDA(yy,zz)); 3746e6e9a74fSStefano Zampini PetscFunctionReturn(0); 3747e6e9a74fSStefano Zampini } 374834d6c7a5SJose E. Roman /* The line below is necessary due to the operations that modify the matrix on the CPU (axpy, scale, etc) */ 37499566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 3750e6e9a74fSStefano Zampini if (!trans) { 37519ff858a8SKarl Rupp matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->mat; 37525f80ce2aSJacob Faibussowitsch PetscCheck(matstruct,PetscObjectComm((PetscObject)A),PETSC_ERR_GPU,"SeqAIJCUSPARSE does not have a 'mat' (need to fix)"); 3753e6e9a74fSStefano Zampini } else { 37541a2c6b5cSJunchao Zhang if (herm || !A->form_explicit_transpose) { 3755e6e9a74fSStefano Zampini opA = herm ? CUSPARSE_OPERATION_CONJUGATE_TRANSPOSE : CUSPARSE_OPERATION_TRANSPOSE; 3756e6e9a74fSStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->mat; 3757e6e9a74fSStefano Zampini } else { 37589566063dSJacob Faibussowitsch if (!cusparsestruct->matTranspose) PetscCall(MatSeqAIJCUSPARSEFormExplicitTranspose(A)); 3759e6e9a74fSStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->matTranspose; 3760e6e9a74fSStefano Zampini } 3761e6e9a74fSStefano Zampini } 3762e6e9a74fSStefano Zampini /* Does the matrix use compressed rows (i.e., drop zero rows)? */ 3763e6e9a74fSStefano Zampini compressed = matstruct->cprowIndices ? PETSC_TRUE : PETSC_FALSE; 3764213423ffSJunchao Zhang 3765e6e9a74fSStefano Zampini try { 37669566063dSJacob Faibussowitsch PetscCall(VecCUDAGetArrayRead(xx,(const PetscScalar**)&xarray)); 37679566063dSJacob Faibussowitsch if (yy == zz) PetscCall(VecCUDAGetArray(zz,&zarray)); /* read & write zz, so need to get uptodate zarray on GPU */ 37689566063dSJacob Faibussowitsch else PetscCall(VecCUDAGetArrayWrite(zz,&zarray)); /* write zz, so no need to init zarray on GPU */ 3769afb2bd1cSJunchao Zhang 37709566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 3771e6e9a74fSStefano Zampini if (opA == CUSPARSE_OPERATION_NON_TRANSPOSE) { 3772afb2bd1cSJunchao Zhang /* z = A x + beta y. 3773afb2bd1cSJunchao Zhang If A is compressed (with less rows), then Ax is shorter than the full z, so we need a work vector to store Ax. 3774afb2bd1cSJunchao Zhang When A is non-compressed, and z = y, we can set beta=1 to compute y = Ax + y in one call. 3775afb2bd1cSJunchao Zhang */ 3776e6e9a74fSStefano Zampini xptr = xarray; 3777afb2bd1cSJunchao Zhang dptr = compressed ? cusparsestruct->workVector->data().get() : zarray; 3778213423ffSJunchao Zhang beta = (yy == zz && !compressed) ? matstruct->beta_one : matstruct->beta_zero; 3779afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3780afb2bd1cSJunchao Zhang /* Get length of x, y for y=Ax. ny might be shorter than the work vector's allocated length, since the work vector is 3781afb2bd1cSJunchao Zhang allocated to accommodate different uses. So we get the length info directly from mat. 3782afb2bd1cSJunchao Zhang */ 3783afb2bd1cSJunchao Zhang if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 3784afb2bd1cSJunchao Zhang CsrMatrix *mat = (CsrMatrix*)matstruct->mat; 3785afb2bd1cSJunchao Zhang nx = mat->num_cols; 3786afb2bd1cSJunchao Zhang ny = mat->num_rows; 3787afb2bd1cSJunchao Zhang } 3788afb2bd1cSJunchao Zhang #endif 3789e6e9a74fSStefano Zampini } else { 3790afb2bd1cSJunchao Zhang /* z = A^T x + beta y 3791afb2bd1cSJunchao Zhang If A is compressed, then we need a work vector as the shorter version of x to compute A^T x. 3792afb2bd1cSJunchao Zhang Note A^Tx is of full length, so we set beta to 1.0 if y exists. 3793afb2bd1cSJunchao Zhang */ 3794afb2bd1cSJunchao Zhang xptr = compressed ? cusparsestruct->workVector->data().get() : xarray; 3795e6e9a74fSStefano Zampini dptr = zarray; 3796e6e9a74fSStefano Zampini beta = yy ? matstruct->beta_one : matstruct->beta_zero; 3797afb2bd1cSJunchao Zhang if (compressed) { /* Scatter x to work vector */ 3798e6e9a74fSStefano Zampini thrust::device_ptr<PetscScalar> xarr = thrust::device_pointer_cast(xarray); 3799a0e72f99SJunchao Zhang thrust::for_each(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(xarr, matstruct->cprowIndices->begin()))), 3800e6e9a74fSStefano Zampini thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(xarr, matstruct->cprowIndices->begin()))) + matstruct->cprowIndices->size(), 3801e6e9a74fSStefano Zampini VecCUDAEqualsReverse()); 3802e6e9a74fSStefano Zampini } 3803afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3804afb2bd1cSJunchao Zhang if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 3805afb2bd1cSJunchao Zhang CsrMatrix *mat = (CsrMatrix*)matstruct->mat; 3806afb2bd1cSJunchao Zhang nx = mat->num_rows; 3807afb2bd1cSJunchao Zhang ny = mat->num_cols; 3808afb2bd1cSJunchao Zhang } 3809afb2bd1cSJunchao Zhang #endif 3810e6e9a74fSStefano Zampini } 38119ae82921SPaul Mullowney 3812afb2bd1cSJunchao Zhang /* csr_spmv does y = alpha op(A) x + beta y */ 3813aa372e3fSPaul Mullowney if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 3814afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 38155f80ce2aSJacob Faibussowitsch PetscCheck(opA >= 0 && opA <= 2,PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE ABI on cusparseOperation_t has changed and PETSc has not been updated accordingly"); 3816afb2bd1cSJunchao Zhang if (!matstruct->cuSpMV[opA].initialized) { /* built on demand */ 38179566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateDnVec(&matstruct->cuSpMV[opA].vecXDescr,nx,xptr,cusparse_scalartype)); 38189566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateDnVec(&matstruct->cuSpMV[opA].vecYDescr,ny,dptr,cusparse_scalartype)); 38199566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSpMV_bufferSize(cusparsestruct->handle, opA, matstruct->alpha_one, 3820afb2bd1cSJunchao Zhang matstruct->matDescr, 3821afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecXDescr, beta, 3822afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecYDescr, 3823afb2bd1cSJunchao Zhang cusparse_scalartype, 3824afb2bd1cSJunchao Zhang cusparsestruct->spmvAlg, 38255f80ce2aSJacob Faibussowitsch &matstruct->cuSpMV[opA].spmvBufferSize)); 38269566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&matstruct->cuSpMV[opA].spmvBuffer,matstruct->cuSpMV[opA].spmvBufferSize)); 3827afb2bd1cSJunchao Zhang 3828afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].initialized = PETSC_TRUE; 3829afb2bd1cSJunchao Zhang } else { 3830afb2bd1cSJunchao Zhang /* x, y's value pointers might change between calls, but their shape is kept, so we just update pointers */ 38319566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseDnVecSetValues(matstruct->cuSpMV[opA].vecXDescr,xptr)); 38329566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseDnVecSetValues(matstruct->cuSpMV[opA].vecYDescr,dptr)); 3833afb2bd1cSJunchao Zhang } 3834afb2bd1cSJunchao Zhang 38359566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSpMV(cusparsestruct->handle, opA, 3836afb2bd1cSJunchao Zhang matstruct->alpha_one, 38373606e59fSJunchao Zhang matstruct->matDescr, /* built in MatSeqAIJCUSPARSECopyToGPU() or MatSeqAIJCUSPARSEFormExplicitTranspose() */ 3838afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecXDescr, 3839afb2bd1cSJunchao Zhang beta, 3840afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecYDescr, 3841afb2bd1cSJunchao Zhang cusparse_scalartype, 3842afb2bd1cSJunchao Zhang cusparsestruct->spmvAlg, 38435f80ce2aSJacob Faibussowitsch matstruct->cuSpMV[opA].spmvBuffer)); 3844afb2bd1cSJunchao Zhang #else 38457656d835SStefano Zampini CsrMatrix *mat = (CsrMatrix*)matstruct->mat; 38469566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparse_csr_spmv(cusparsestruct->handle, opA, 3847a65300a6SPaul Mullowney mat->num_rows, mat->num_cols, 3848afb2bd1cSJunchao Zhang mat->num_entries, matstruct->alpha_one, matstruct->descr, 3849aa372e3fSPaul Mullowney mat->values->data().get(), mat->row_offsets->data().get(), 3850e6e9a74fSStefano Zampini mat->column_indices->data().get(), xptr, beta, 38515f80ce2aSJacob Faibussowitsch dptr)); 3852afb2bd1cSJunchao Zhang #endif 3853aa372e3fSPaul Mullowney } else { 3854213423ffSJunchao Zhang if (cusparsestruct->nrows) { 3855afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3856afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 3857afb2bd1cSJunchao Zhang #else 3858301298b4SMark Adams cusparseHybMat_t hybMat = (cusparseHybMat_t)matstruct->mat; 38599566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparse_hyb_spmv(cusparsestruct->handle, opA, 3860afb2bd1cSJunchao Zhang matstruct->alpha_one, matstruct->descr, hybMat, 3861e6e9a74fSStefano Zampini xptr, beta, 38625f80ce2aSJacob Faibussowitsch dptr)); 3863afb2bd1cSJunchao Zhang #endif 3864a65300a6SPaul Mullowney } 3865aa372e3fSPaul Mullowney } 38669566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 3867aa372e3fSPaul Mullowney 3868e6e9a74fSStefano Zampini if (opA == CUSPARSE_OPERATION_NON_TRANSPOSE) { 3869213423ffSJunchao Zhang if (yy) { /* MatMultAdd: zz = A*xx + yy */ 3870213423ffSJunchao Zhang if (compressed) { /* A is compressed. We first copy yy to zz, then ScatterAdd the work vector to zz */ 38719566063dSJacob Faibussowitsch PetscCall(VecCopy_SeqCUDA(yy,zz)); /* zz = yy */ 3872e6e9a74fSStefano Zampini } else if (zz != yy) { /* A is not compressed. zz already contains A*xx, and we just need to add yy */ 38739566063dSJacob Faibussowitsch PetscCall(VecAXPY_SeqCUDA(zz,1.0,yy)); /* zz += yy */ 38747656d835SStefano Zampini } 3875213423ffSJunchao Zhang } else if (compressed) { /* MatMult: zz = A*xx. A is compressed, so we zero zz first, then ScatterAdd the work vector to zz */ 38769566063dSJacob Faibussowitsch PetscCall(VecSet_SeqCUDA(zz,0)); 38777656d835SStefano Zampini } 38787656d835SStefano Zampini 3879213423ffSJunchao Zhang /* ScatterAdd the result from work vector into the full vector when A is compressed */ 3880213423ffSJunchao Zhang if (compressed) { 38819566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 3882a0e72f99SJunchao Zhang /* I wanted to make this for_each asynchronous but failed. thrust::async::for_each() returns an event (internally registerred) 3883a0e72f99SJunchao Zhang and in the destructor of the scope, it will call cudaStreamSynchronize() on this stream. One has to store all events to 3884a0e72f99SJunchao Zhang prevent that. So I just add a ScatterAdd kernel. 3885a0e72f99SJunchao Zhang */ 3886a0e72f99SJunchao Zhang #if 0 3887a0e72f99SJunchao Zhang thrust::device_ptr<PetscScalar> zptr = thrust::device_pointer_cast(zarray); 3888a0e72f99SJunchao Zhang thrust::async::for_each(thrust::cuda::par.on(cusparsestruct->stream), 3889a0e72f99SJunchao Zhang thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(zptr, matstruct->cprowIndices->begin()))), 3890e6e9a74fSStefano Zampini thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(zptr, matstruct->cprowIndices->begin()))) + matstruct->cprowIndices->size(), 3891c41cb2e2SAlejandro Lamas Daviña VecCUDAPlusEquals()); 3892a0e72f99SJunchao Zhang #else 3893a0e72f99SJunchao Zhang PetscInt n = matstruct->cprowIndices->size(); 3894a0e72f99SJunchao Zhang ScatterAdd<<<(n+255)/256,256,0,PetscDefaultCudaStream>>>(n,matstruct->cprowIndices->data().get(),cusparsestruct->workVector->data().get(),zarray); 3895a0e72f99SJunchao Zhang #endif 38969566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 3897e6e9a74fSStefano Zampini } 3898e6e9a74fSStefano Zampini } else { 3899e6e9a74fSStefano Zampini if (yy && yy != zz) { 39009566063dSJacob Faibussowitsch PetscCall(VecAXPY_SeqCUDA(zz,1.0,yy)); /* zz += yy */ 3901e6e9a74fSStefano Zampini } 3902e6e9a74fSStefano Zampini } 39039566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayRead(xx,(const PetscScalar**)&xarray)); 39049566063dSJacob Faibussowitsch if (yy == zz) PetscCall(VecCUDARestoreArray(zz,&zarray)); 39059566063dSJacob Faibussowitsch else PetscCall(VecCUDARestoreArrayWrite(zz,&zarray)); 39069ae82921SPaul Mullowney } catch(char *ex) { 390798921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 39089ae82921SPaul Mullowney } 3909e6e9a74fSStefano Zampini if (yy) { 39109566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0*a->nz)); 3911e6e9a74fSStefano Zampini } else { 39129566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0*a->nz-a->nonzerorowcnt)); 3913e6e9a74fSStefano Zampini } 39149ae82921SPaul Mullowney PetscFunctionReturn(0); 39159ae82921SPaul Mullowney } 39169ae82921SPaul Mullowney 39176fa9248bSJed Brown static PetscErrorCode MatMultTransposeAdd_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy,Vec zz) 3918ca45077fSPaul Mullowney { 3919ca45077fSPaul Mullowney PetscFunctionBegin; 39209566063dSJacob Faibussowitsch PetscCall(MatMultAddKernel_SeqAIJCUSPARSE(A,xx,yy,zz,PETSC_TRUE,PETSC_FALSE)); 3921ca45077fSPaul Mullowney PetscFunctionReturn(0); 3922ca45077fSPaul Mullowney } 3923ca45077fSPaul Mullowney 39246fa9248bSJed Brown static PetscErrorCode MatAssemblyEnd_SeqAIJCUSPARSE(Mat A,MatAssemblyType mode) 39259ae82921SPaul Mullowney { 3926042217e8SBarry Smith PetscObjectState onnz = A->nonzerostate; 3927042217e8SBarry Smith Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 39283fa6b06aSMark Adams 3929042217e8SBarry Smith PetscFunctionBegin; 39309566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd_SeqAIJ(A,mode)); 3931042217e8SBarry Smith if (onnz != A->nonzerostate && cusp->deviceMat) { 3932042217e8SBarry Smith 39339566063dSJacob Faibussowitsch PetscCall(PetscInfo(A,"Destroy device mat since nonzerostate changed\n")); 39349566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(cusp->deviceMat)); 3935042217e8SBarry Smith cusp->deviceMat = NULL; 3936042217e8SBarry Smith } 39379ae82921SPaul Mullowney PetscFunctionReturn(0); 39389ae82921SPaul Mullowney } 39399ae82921SPaul Mullowney 39409ae82921SPaul Mullowney /* --------------------------------------------------------------------------------*/ 3941e057df02SPaul Mullowney /*@ 39429ae82921SPaul Mullowney MatCreateSeqAIJCUSPARSE - Creates a sparse matrix in AIJ (compressed row) format 3943e057df02SPaul Mullowney (the default parallel PETSc format). This matrix will ultimately pushed down 3944e057df02SPaul Mullowney to NVidia GPUs and use the CUSPARSE library for calculations. For good matrix 3945e057df02SPaul Mullowney assembly performance the user should preallocate the matrix storage by setting 3946e057df02SPaul Mullowney the parameter nz (or the array nnz). By setting these parameters accurately, 3947e057df02SPaul Mullowney performance during matrix assembly can be increased by more than a factor of 50. 39489ae82921SPaul Mullowney 3949d083f849SBarry Smith Collective 39509ae82921SPaul Mullowney 39519ae82921SPaul Mullowney Input Parameters: 39529ae82921SPaul Mullowney + comm - MPI communicator, set to PETSC_COMM_SELF 39539ae82921SPaul Mullowney . m - number of rows 39549ae82921SPaul Mullowney . n - number of columns 39559ae82921SPaul Mullowney . nz - number of nonzeros per row (same for all rows) 39569ae82921SPaul Mullowney - nnz - array containing the number of nonzeros in the various rows 39570298fd71SBarry Smith (possibly different for each row) or NULL 39589ae82921SPaul Mullowney 39599ae82921SPaul Mullowney Output Parameter: 39609ae82921SPaul Mullowney . A - the matrix 39619ae82921SPaul Mullowney 39629ae82921SPaul Mullowney It is recommended that one use the MatCreate(), MatSetType() and/or MatSetFromOptions(), 39639ae82921SPaul Mullowney MatXXXXSetPreallocation() paradgm instead of this routine directly. 39649ae82921SPaul Mullowney [MatXXXXSetPreallocation() is, for example, MatSeqAIJSetPreallocation] 39659ae82921SPaul Mullowney 39669ae82921SPaul Mullowney Notes: 39679ae82921SPaul Mullowney If nnz is given then nz is ignored 39689ae82921SPaul Mullowney 39699ae82921SPaul Mullowney The AIJ format (also called the Yale sparse matrix format or 39709ae82921SPaul Mullowney compressed row storage), is fully compatible with standard Fortran 77 39719ae82921SPaul Mullowney storage. That is, the stored row and column indices can begin at 39729ae82921SPaul Mullowney either one (as in Fortran) or zero. See the users' manual for details. 39739ae82921SPaul Mullowney 39749ae82921SPaul Mullowney Specify the preallocated storage with either nz or nnz (not both). 39750298fd71SBarry Smith Set nz=PETSC_DEFAULT and nnz=NULL for PETSc to control dynamic memory 39769ae82921SPaul Mullowney allocation. For large problems you MUST preallocate memory or you 39779ae82921SPaul Mullowney will get TERRIBLE performance, see the users' manual chapter on matrices. 39789ae82921SPaul Mullowney 39799ae82921SPaul Mullowney By default, this format uses inodes (identical nodes) when possible, to 39809ae82921SPaul Mullowney improve numerical efficiency of matrix-vector products and solves. We 39819ae82921SPaul Mullowney search for consecutive rows with the same nonzero structure, thereby 39829ae82921SPaul Mullowney reusing matrix information to achieve increased efficiency. 39839ae82921SPaul Mullowney 39849ae82921SPaul Mullowney Level: intermediate 39859ae82921SPaul Mullowney 3986db781477SPatrick Sanan .seealso: `MatCreate()`, `MatCreateAIJ()`, `MatSetValues()`, `MatSeqAIJSetColumnIndices()`, `MatCreateSeqAIJWithArrays()`, `MatCreateAIJ()`, `MATSEQAIJCUSPARSE`, `MATAIJCUSPARSE` 39879ae82921SPaul Mullowney @*/ 39889ae82921SPaul Mullowney PetscErrorCode MatCreateSeqAIJCUSPARSE(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt nz,const PetscInt nnz[],Mat *A) 39899ae82921SPaul Mullowney { 39909ae82921SPaul Mullowney PetscFunctionBegin; 39919566063dSJacob Faibussowitsch PetscCall(MatCreate(comm,A)); 39929566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*A,m,n,m,n)); 39939566063dSJacob Faibussowitsch PetscCall(MatSetType(*A,MATSEQAIJCUSPARSE)); 39949566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation_SeqAIJ(*A,nz,(PetscInt*)nnz)); 39959ae82921SPaul Mullowney PetscFunctionReturn(0); 39969ae82921SPaul Mullowney } 39979ae82921SPaul Mullowney 39986fa9248bSJed Brown static PetscErrorCode MatDestroy_SeqAIJCUSPARSE(Mat A) 39999ae82921SPaul Mullowney { 40009ae82921SPaul Mullowney PetscFunctionBegin; 40019ae82921SPaul Mullowney if (A->factortype == MAT_FACTOR_NONE) { 40029566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSE_Destroy((Mat_SeqAIJCUSPARSE**)&A->spptr)); 40039ae82921SPaul Mullowney } else { 40049566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSETriFactors_Destroy((Mat_SeqAIJCUSPARSETriFactors**)&A->spptr)); 4005aa372e3fSPaul Mullowney } 40069566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJCopySubArray_C",NULL)); 40079566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatCUSPARSESetFormat_C",NULL)); 40089566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatCUSPARSESetUseCPUSolve_C",NULL)); 40099566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C",NULL)); 40109566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdense_C",NULL)); 40119566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C",NULL)); 40129566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL)); 40139566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",NULL)); 40149566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",NULL)); 40159566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatConvert_seqaijcusparse_hypre_C",NULL)); 40169566063dSJacob Faibussowitsch PetscCall(MatDestroy_SeqAIJ(A)); 40179ae82921SPaul Mullowney PetscFunctionReturn(0); 40189ae82921SPaul Mullowney } 40199ae82921SPaul Mullowney 4020ccdfe979SStefano Zampini PETSC_INTERN PetscErrorCode MatConvert_SeqAIJ_SeqAIJCUSPARSE(Mat,MatType,MatReuse,Mat*); 402195639643SRichard Tran Mills static PetscErrorCode MatBindToCPU_SeqAIJCUSPARSE(Mat,PetscBool); 40229ff858a8SKarl Rupp static PetscErrorCode MatDuplicate_SeqAIJCUSPARSE(Mat A,MatDuplicateOption cpvalues,Mat *B) 40239ff858a8SKarl Rupp { 40249ff858a8SKarl Rupp PetscFunctionBegin; 40259566063dSJacob Faibussowitsch PetscCall(MatDuplicate_SeqAIJ(A,cpvalues,B)); 40269566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqAIJ_SeqAIJCUSPARSE(*B,MATSEQAIJCUSPARSE,MAT_INPLACE_MATRIX,B)); 40279ff858a8SKarl Rupp PetscFunctionReturn(0); 40289ff858a8SKarl Rupp } 40299ff858a8SKarl Rupp 4030039c6fbaSStefano Zampini static PetscErrorCode MatAXPY_SeqAIJCUSPARSE(Mat Y,PetscScalar a,Mat X,MatStructure str) 403195639643SRichard Tran Mills { 4032a587d139SMark Mat_SeqAIJ *x = (Mat_SeqAIJ*)X->data,*y = (Mat_SeqAIJ*)Y->data; 4033039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cy; 4034039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cx; 4035039c6fbaSStefano Zampini PetscScalar *ay; 4036039c6fbaSStefano Zampini const PetscScalar *ax; 4037039c6fbaSStefano Zampini CsrMatrix *csry,*csrx; 4038e6e9a74fSStefano Zampini 403995639643SRichard Tran Mills PetscFunctionBegin; 4040a49f1ed0SStefano Zampini cy = (Mat_SeqAIJCUSPARSE*)Y->spptr; 4041a49f1ed0SStefano Zampini cx = (Mat_SeqAIJCUSPARSE*)X->spptr; 4042039c6fbaSStefano Zampini if (X->ops->axpy != Y->ops->axpy) { 40439566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(Y,PETSC_FALSE)); 40449566063dSJacob Faibussowitsch PetscCall(MatAXPY_SeqAIJ(Y,a,X,str)); 4045a587d139SMark PetscFunctionReturn(0); 404695639643SRichard Tran Mills } 4047039c6fbaSStefano Zampini /* if we are here, it means both matrices are bound to GPU */ 40489566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(Y)); 40499566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(X)); 40505f80ce2aSJacob Faibussowitsch PetscCheck(cy->format == MAT_CUSPARSE_CSR,PetscObjectComm((PetscObject)Y),PETSC_ERR_GPU,"only MAT_CUSPARSE_CSR supported"); 40515f80ce2aSJacob Faibussowitsch PetscCheck(cx->format == MAT_CUSPARSE_CSR,PetscObjectComm((PetscObject)X),PETSC_ERR_GPU,"only MAT_CUSPARSE_CSR supported"); 4052039c6fbaSStefano Zampini csry = (CsrMatrix*)cy->mat->mat; 4053039c6fbaSStefano Zampini csrx = (CsrMatrix*)cx->mat->mat; 4054039c6fbaSStefano Zampini /* see if we can turn this into a cublas axpy */ 4055039c6fbaSStefano Zampini if (str != SAME_NONZERO_PATTERN && x->nz == y->nz && !x->compressedrow.use && !y->compressedrow.use) { 4056039c6fbaSStefano Zampini bool eq = thrust::equal(thrust::device,csry->row_offsets->begin(),csry->row_offsets->end(),csrx->row_offsets->begin()); 4057039c6fbaSStefano Zampini if (eq) { 4058039c6fbaSStefano Zampini eq = thrust::equal(thrust::device,csry->column_indices->begin(),csry->column_indices->end(),csrx->column_indices->begin()); 4059039c6fbaSStefano Zampini } 4060039c6fbaSStefano Zampini if (eq) str = SAME_NONZERO_PATTERN; 4061039c6fbaSStefano Zampini } 4062d2be01edSStefano Zampini /* spgeam is buggy with one column */ 4063d2be01edSStefano Zampini if (Y->cmap->n == 1 && str != SAME_NONZERO_PATTERN) str = DIFFERENT_NONZERO_PATTERN; 4064039c6fbaSStefano Zampini 4065039c6fbaSStefano Zampini if (str == SUBSET_NONZERO_PATTERN) { 4066039c6fbaSStefano Zampini PetscScalar b = 1.0; 4067039c6fbaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 4068039c6fbaSStefano Zampini size_t bufferSize; 4069039c6fbaSStefano Zampini void *buffer; 4070039c6fbaSStefano Zampini #endif 4071039c6fbaSStefano Zampini 40729566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEGetArrayRead(X,&ax)); 40739566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEGetArray(Y,&ay)); 40749566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetPointerMode(cy->handle, CUSPARSE_POINTER_MODE_HOST)); 4075039c6fbaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 40769566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparse_csr_spgeam_bufferSize(cy->handle,Y->rmap->n,Y->cmap->n, 4077039c6fbaSStefano Zampini &a,cx->mat->descr,x->nz,ax,csrx->row_offsets->data().get(),csrx->column_indices->data().get(), 4078039c6fbaSStefano Zampini &b,cy->mat->descr,y->nz,ay,csry->row_offsets->data().get(),csry->column_indices->data().get(), 40795f80ce2aSJacob Faibussowitsch cy->mat->descr, ay,csry->row_offsets->data().get(),csry->column_indices->data().get(),&bufferSize)); 40809566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&buffer,bufferSize)); 40819566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 40829566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparse_csr_spgeam(cy->handle,Y->rmap->n,Y->cmap->n, 4083039c6fbaSStefano Zampini &a,cx->mat->descr,x->nz,ax,csrx->row_offsets->data().get(),csrx->column_indices->data().get(), 4084039c6fbaSStefano Zampini &b,cy->mat->descr,y->nz,ay,csry->row_offsets->data().get(),csry->column_indices->data().get(), 40855f80ce2aSJacob Faibussowitsch cy->mat->descr, ay,csry->row_offsets->data().get(),csry->column_indices->data().get(),buffer)); 40869566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(x->nz + y->nz)); 40879566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 40889566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(buffer)); 4089039c6fbaSStefano Zampini #else 40909566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 40919566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparse_csr_spgeam(cy->handle,Y->rmap->n,Y->cmap->n, 4092039c6fbaSStefano Zampini &a,cx->mat->descr,x->nz,ax,csrx->row_offsets->data().get(),csrx->column_indices->data().get(), 4093039c6fbaSStefano Zampini &b,cy->mat->descr,y->nz,ay,csry->row_offsets->data().get(),csry->column_indices->data().get(), 40945f80ce2aSJacob Faibussowitsch cy->mat->descr, ay,csry->row_offsets->data().get(),csry->column_indices->data().get())); 40959566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(x->nz + y->nz)); 40969566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 4097039c6fbaSStefano Zampini #endif 40989566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetPointerMode(cy->handle, CUSPARSE_POINTER_MODE_DEVICE)); 40999566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSERestoreArrayRead(X,&ax)); 41009566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSERestoreArray(Y,&ay)); 41019566063dSJacob Faibussowitsch PetscCall(MatSeqAIJInvalidateDiagonal(Y)); 4102039c6fbaSStefano Zampini } else if (str == SAME_NONZERO_PATTERN) { 4103a587d139SMark cublasHandle_t cublasv2handle; 4104a587d139SMark PetscBLASInt one = 1, bnz = 1; 4105039c6fbaSStefano Zampini 41069566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEGetArrayRead(X,&ax)); 41079566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEGetArray(Y,&ay)); 41089566063dSJacob Faibussowitsch PetscCall(PetscCUBLASGetHandle(&cublasv2handle)); 41099566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(x->nz,&bnz)); 41109566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 41119566063dSJacob Faibussowitsch PetscCallCUBLAS(cublasXaxpy(cublasv2handle,bnz,&a,ax,one,ay,one)); 41129566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0*bnz)); 41139566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 41149566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSERestoreArrayRead(X,&ax)); 41159566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSERestoreArray(Y,&ay)); 41169566063dSJacob Faibussowitsch PetscCall(MatSeqAIJInvalidateDiagonal(Y)); 4117039c6fbaSStefano Zampini } else { 41189566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(Y,PETSC_FALSE)); 41199566063dSJacob Faibussowitsch PetscCall(MatAXPY_SeqAIJ(Y,a,X,str)); 4120a587d139SMark } 412195639643SRichard Tran Mills PetscFunctionReturn(0); 412295639643SRichard Tran Mills } 412395639643SRichard Tran Mills 412433c9ba73SStefano Zampini static PetscErrorCode MatScale_SeqAIJCUSPARSE(Mat Y,PetscScalar a) 412533c9ba73SStefano Zampini { 412633c9ba73SStefano Zampini Mat_SeqAIJ *y = (Mat_SeqAIJ*)Y->data; 412733c9ba73SStefano Zampini PetscScalar *ay; 412833c9ba73SStefano Zampini cublasHandle_t cublasv2handle; 412933c9ba73SStefano Zampini PetscBLASInt one = 1, bnz = 1; 413033c9ba73SStefano Zampini 413133c9ba73SStefano Zampini PetscFunctionBegin; 41329566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEGetArray(Y,&ay)); 41339566063dSJacob Faibussowitsch PetscCall(PetscCUBLASGetHandle(&cublasv2handle)); 41349566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(y->nz,&bnz)); 41359566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 41369566063dSJacob Faibussowitsch PetscCallCUBLAS(cublasXscal(cublasv2handle,bnz,&a,ay,one)); 41379566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(bnz)); 41389566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 41399566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSERestoreArray(Y,&ay)); 41409566063dSJacob Faibussowitsch PetscCall(MatSeqAIJInvalidateDiagonal(Y)); 414133c9ba73SStefano Zampini PetscFunctionReturn(0); 414233c9ba73SStefano Zampini } 414333c9ba73SStefano Zampini 41443fa6b06aSMark Adams static PetscErrorCode MatZeroEntries_SeqAIJCUSPARSE(Mat A) 41453fa6b06aSMark Adams { 41467e8381f9SStefano Zampini PetscBool both = PETSC_FALSE; 4147a587d139SMark Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 41487e8381f9SStefano Zampini 41493fa6b06aSMark Adams PetscFunctionBegin; 41503fa6b06aSMark Adams if (A->factortype == MAT_FACTOR_NONE) { 41513fa6b06aSMark Adams Mat_SeqAIJCUSPARSE *spptr = (Mat_SeqAIJCUSPARSE*)A->spptr; 41527e8381f9SStefano Zampini if (spptr->mat) { 41537e8381f9SStefano Zampini CsrMatrix* matrix = (CsrMatrix*)spptr->mat->mat; 41547e8381f9SStefano Zampini if (matrix->values) { 41557e8381f9SStefano Zampini both = PETSC_TRUE; 41567e8381f9SStefano Zampini thrust::fill(thrust::device,matrix->values->begin(),matrix->values->end(),0.); 41577e8381f9SStefano Zampini } 41587e8381f9SStefano Zampini } 41597e8381f9SStefano Zampini if (spptr->matTranspose) { 41607e8381f9SStefano Zampini CsrMatrix* matrix = (CsrMatrix*)spptr->matTranspose->mat; 41617e8381f9SStefano Zampini if (matrix->values) { 41627e8381f9SStefano Zampini thrust::fill(thrust::device,matrix->values->begin(),matrix->values->end(),0.); 41637e8381f9SStefano Zampini } 41647e8381f9SStefano Zampini } 41653fa6b06aSMark Adams } 41669566063dSJacob Faibussowitsch PetscCall(PetscArrayzero(a->a,a->i[A->rmap->n])); 41679566063dSJacob Faibussowitsch PetscCall(MatSeqAIJInvalidateDiagonal(A)); 41687e8381f9SStefano Zampini if (both) A->offloadmask = PETSC_OFFLOAD_BOTH; 4169a587d139SMark else A->offloadmask = PETSC_OFFLOAD_CPU; 41703fa6b06aSMark Adams PetscFunctionReturn(0); 41713fa6b06aSMark Adams } 41723fa6b06aSMark Adams 4173a587d139SMark static PetscErrorCode MatBindToCPU_SeqAIJCUSPARSE(Mat A,PetscBool flg) 4174a587d139SMark { 4175a587d139SMark Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 4176a587d139SMark 4177a587d139SMark PetscFunctionBegin; 41789a14fc28SStefano Zampini if (A->factortype != MAT_FACTOR_NONE) { 41799a14fc28SStefano Zampini A->boundtocpu = flg; 41809a14fc28SStefano Zampini PetscFunctionReturn(0); 41819a14fc28SStefano Zampini } 4182a587d139SMark if (flg) { 41839566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyFromGPU(A)); 4184a587d139SMark 418533c9ba73SStefano Zampini A->ops->scale = MatScale_SeqAIJ; 4186a587d139SMark A->ops->axpy = MatAXPY_SeqAIJ; 4187a587d139SMark A->ops->zeroentries = MatZeroEntries_SeqAIJ; 4188a587d139SMark A->ops->mult = MatMult_SeqAIJ; 4189a587d139SMark A->ops->multadd = MatMultAdd_SeqAIJ; 4190a587d139SMark A->ops->multtranspose = MatMultTranspose_SeqAIJ; 4191a587d139SMark A->ops->multtransposeadd = MatMultTransposeAdd_SeqAIJ; 4192a587d139SMark A->ops->multhermitiantranspose = NULL; 4193a587d139SMark A->ops->multhermitiantransposeadd = NULL; 4194fcdce8c4SStefano Zampini A->ops->productsetfromoptions = MatProductSetFromOptions_SeqAIJ; 41959566063dSJacob Faibussowitsch PetscCall(PetscMemzero(a->ops,sizeof(Mat_SeqAIJOps))); 41969566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJCopySubArray_C",NULL)); 41979566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C",NULL)); 41989566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdense_C",NULL)); 41999566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",NULL)); 42009566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",NULL)); 42019566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C",NULL)); 4202a587d139SMark } else { 420333c9ba73SStefano Zampini A->ops->scale = MatScale_SeqAIJCUSPARSE; 4204a587d139SMark A->ops->axpy = MatAXPY_SeqAIJCUSPARSE; 4205a587d139SMark A->ops->zeroentries = MatZeroEntries_SeqAIJCUSPARSE; 4206a587d139SMark A->ops->mult = MatMult_SeqAIJCUSPARSE; 4207a587d139SMark A->ops->multadd = MatMultAdd_SeqAIJCUSPARSE; 4208a587d139SMark A->ops->multtranspose = MatMultTranspose_SeqAIJCUSPARSE; 4209a587d139SMark A->ops->multtransposeadd = MatMultTransposeAdd_SeqAIJCUSPARSE; 4210a587d139SMark A->ops->multhermitiantranspose = MatMultHermitianTranspose_SeqAIJCUSPARSE; 4211a587d139SMark A->ops->multhermitiantransposeadd = MatMultHermitianTransposeAdd_SeqAIJCUSPARSE; 4212fcdce8c4SStefano Zampini A->ops->productsetfromoptions = MatProductSetFromOptions_SeqAIJCUSPARSE; 421367a45760SJunchao Zhang a->ops->getarray = MatSeqAIJGetArray_SeqAIJCUSPARSE; 421467a45760SJunchao Zhang a->ops->restorearray = MatSeqAIJRestoreArray_SeqAIJCUSPARSE; 421567a45760SJunchao Zhang a->ops->getarrayread = MatSeqAIJGetArrayRead_SeqAIJCUSPARSE; 421667a45760SJunchao Zhang a->ops->restorearrayread = MatSeqAIJRestoreArrayRead_SeqAIJCUSPARSE; 421767a45760SJunchao Zhang a->ops->getarraywrite = MatSeqAIJGetArrayWrite_SeqAIJCUSPARSE; 421867a45760SJunchao Zhang a->ops->restorearraywrite = MatSeqAIJRestoreArrayWrite_SeqAIJCUSPARSE; 42197ee59b9bSJunchao Zhang a->ops->getcsrandmemtype = MatSeqAIJGetCSRAndMemType_SeqAIJCUSPARSE; 42207ee59b9bSJunchao Zhang 42219566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJCopySubArray_C",MatSeqAIJCopySubArray_SeqAIJCUSPARSE)); 42229566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C",MatProductSetFromOptions_SeqAIJCUSPARSE)); 42239566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdense_C",MatProductSetFromOptions_SeqAIJCUSPARSE)); 42249566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",MatSetPreallocationCOO_SeqAIJCUSPARSE)); 42259566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",MatSetValuesCOO_SeqAIJCUSPARSE)); 42269566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C",MatProductSetFromOptions_SeqAIJCUSPARSE)); 4227a587d139SMark } 4228a587d139SMark A->boundtocpu = flg; 4229ea500dcfSRichard Tran Mills if (flg && a->inode.size) { 4230ea500dcfSRichard Tran Mills a->inode.use = PETSC_TRUE; 4231ea500dcfSRichard Tran Mills } else { 4232ea500dcfSRichard Tran Mills a->inode.use = PETSC_FALSE; 4233ea500dcfSRichard Tran Mills } 4234a587d139SMark PetscFunctionReturn(0); 4235a587d139SMark } 4236a587d139SMark 423749735bf3SStefano Zampini PETSC_INTERN PetscErrorCode MatConvert_SeqAIJ_SeqAIJCUSPARSE(Mat A, MatType mtype, MatReuse reuse, Mat* newmat) 42389ae82921SPaul Mullowney { 423949735bf3SStefano Zampini Mat B; 42409ae82921SPaul Mullowney 42419ae82921SPaul Mullowney PetscFunctionBegin; 42429566063dSJacob Faibussowitsch PetscCall(PetscDeviceInitialize(PETSC_DEVICE_CUDA)); /* first use of CUSPARSE may be via MatConvert */ 424349735bf3SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 42449566063dSJacob Faibussowitsch PetscCall(MatDuplicate(A,MAT_COPY_VALUES,newmat)); 424549735bf3SStefano Zampini } else if (reuse == MAT_REUSE_MATRIX) { 42469566063dSJacob Faibussowitsch PetscCall(MatCopy(A,*newmat,SAME_NONZERO_PATTERN)); 424749735bf3SStefano Zampini } 424849735bf3SStefano Zampini B = *newmat; 424949735bf3SStefano Zampini 42509566063dSJacob Faibussowitsch PetscCall(PetscFree(B->defaultvectype)); 42519566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(VECCUDA,&B->defaultvectype)); 425234136279SStefano Zampini 425349735bf3SStefano Zampini if (reuse != MAT_REUSE_MATRIX && !B->spptr) { 42549ae82921SPaul Mullowney if (B->factortype == MAT_FACTOR_NONE) { 4255e6e9a74fSStefano Zampini Mat_SeqAIJCUSPARSE *spptr; 42569566063dSJacob Faibussowitsch PetscCall(PetscNew(&spptr)); 42579566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreate(&spptr->handle)); 42589566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetStream(spptr->handle,PetscDefaultCudaStream)); 42591a2c6b5cSJunchao Zhang spptr->format = MAT_CUSPARSE_CSR; 4260d8132acaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 4261ba986b86SSatish Balay #if CUSPARSE_VERSION > 11301 4262a435da06SStefano Zampini spptr->spmvAlg = CUSPARSE_SPMV_CSR_ALG1; /* default, since we only support csr */ 4263a435da06SStefano Zampini #else 4264d8132acaSStefano Zampini spptr->spmvAlg = CUSPARSE_CSRMV_ALG1; /* default, since we only support csr */ 4265a435da06SStefano Zampini #endif 4266d8132acaSStefano Zampini spptr->spmmAlg = CUSPARSE_SPMM_CSR_ALG1; /* default, only support column-major dense matrix B */ 4267d8132acaSStefano Zampini spptr->csr2cscAlg = CUSPARSE_CSR2CSC_ALG1; 4268d8132acaSStefano Zampini #endif 42691a2c6b5cSJunchao Zhang B->spptr = spptr; 42709ae82921SPaul Mullowney } else { 4271e6e9a74fSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *spptr; 4272e6e9a74fSStefano Zampini 42739566063dSJacob Faibussowitsch PetscCall(PetscNew(&spptr)); 42749566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreate(&spptr->handle)); 42759566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetStream(spptr->handle,PetscDefaultCudaStream)); 4276e6e9a74fSStefano Zampini B->spptr = spptr; 42779ae82921SPaul Mullowney } 4278e6e9a74fSStefano Zampini B->offloadmask = PETSC_OFFLOAD_UNALLOCATED; 427949735bf3SStefano Zampini } 4280693b0035SStefano Zampini B->ops->assemblyend = MatAssemblyEnd_SeqAIJCUSPARSE; 42819ae82921SPaul Mullowney B->ops->destroy = MatDestroy_SeqAIJCUSPARSE; 42821a2c6b5cSJunchao Zhang B->ops->setoption = MatSetOption_SeqAIJCUSPARSE; 42839ae82921SPaul Mullowney B->ops->setfromoptions = MatSetFromOptions_SeqAIJCUSPARSE; 428495639643SRichard Tran Mills B->ops->bindtocpu = MatBindToCPU_SeqAIJCUSPARSE; 4285693b0035SStefano Zampini B->ops->duplicate = MatDuplicate_SeqAIJCUSPARSE; 42862205254eSKarl Rupp 42879566063dSJacob Faibussowitsch PetscCall(MatBindToCPU_SeqAIJCUSPARSE(B,PETSC_FALSE)); 42889566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)B,MATSEQAIJCUSPARSE)); 42899566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatCUSPARSESetFormat_C",MatCUSPARSESetFormat_SeqAIJCUSPARSE)); 4290ae48a8d0SStefano Zampini #if defined(PETSC_HAVE_HYPRE) 42919566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatConvert_seqaijcusparse_hypre_C",MatConvert_AIJ_HYPRE)); 4292ae48a8d0SStefano Zampini #endif 42939566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatCUSPARSESetUseCPUSolve_C",MatCUSPARSESetUseCPUSolve_SeqAIJCUSPARSE)); 42949ae82921SPaul Mullowney PetscFunctionReturn(0); 42959ae82921SPaul Mullowney } 42969ae82921SPaul Mullowney 429702fe1965SBarry Smith PETSC_EXTERN PetscErrorCode MatCreate_SeqAIJCUSPARSE(Mat B) 429802fe1965SBarry Smith { 429902fe1965SBarry Smith PetscFunctionBegin; 43009566063dSJacob Faibussowitsch PetscCall(MatCreate_SeqAIJ(B)); 43019566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqAIJ_SeqAIJCUSPARSE(B,MATSEQAIJCUSPARSE,MAT_INPLACE_MATRIX,&B)); 430202fe1965SBarry Smith PetscFunctionReturn(0); 430302fe1965SBarry Smith } 430402fe1965SBarry Smith 43053ca39a21SBarry Smith /*MC 4306e057df02SPaul Mullowney MATSEQAIJCUSPARSE - MATAIJCUSPARSE = "(seq)aijcusparse" - A matrix type to be used for sparse matrices. 4307e057df02SPaul Mullowney 4308e057df02SPaul Mullowney A matrix type type whose data resides on Nvidia GPUs. These matrices can be in either 43092692e278SPaul Mullowney CSR, ELL, or Hybrid format. The ELL and HYB formats require CUDA 4.2 or later. 43102692e278SPaul Mullowney All matrix calculations are performed on Nvidia GPUs using the CUSPARSE library. 4311e057df02SPaul Mullowney 4312e057df02SPaul Mullowney Options Database Keys: 4313e057df02SPaul Mullowney + -mat_type aijcusparse - sets the matrix type to "seqaijcusparse" during a call to MatSetFromOptions() 4314aa372e3fSPaul Mullowney . -mat_cusparse_storage_format csr - sets the storage format of matrices (for MatMult and factors in MatSolve) during a call to MatSetFromOptions(). Other options include ell (ellpack) or hyb (hybrid). 4315a2b725a8SWilliam Gropp - -mat_cusparse_mult_storage_format csr - sets the storage format of matrices (for MatMult) during a call to MatSetFromOptions(). Other options include ell (ellpack) or hyb (hybrid). 4316365b711fSMark Adams + -mat_cusparse_use_cpu_solve - Do MatSolve on CPU 4317e057df02SPaul Mullowney 4318e057df02SPaul Mullowney Level: beginner 4319e057df02SPaul Mullowney 4320db781477SPatrick Sanan .seealso: `MatCreateSeqAIJCUSPARSE()`, `MATAIJCUSPARSE`, `MatCreateAIJCUSPARSE()`, `MatCUSPARSESetFormat()`, `MatCUSPARSEStorageFormat`, `MatCUSPARSEFormatOperation` 4321e057df02SPaul Mullowney M*/ 43227f756511SDominic Meiser 4323bddcd29dSMark Adams PETSC_EXTERN PetscErrorCode MatGetFactor_seqaijcusparse_cusparse_band(Mat,MatFactorType,Mat*); 43240f39cd5aSBarry Smith 43253ca39a21SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_CUSPARSE(void) 432642c9c57cSBarry Smith { 432742c9c57cSBarry Smith PetscFunctionBegin; 43289566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERCUSPARSEBAND,MATSEQAIJ,MAT_FACTOR_LU,MatGetFactor_seqaijcusparse_cusparse_band)); 43299566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_LU,MatGetFactor_seqaijcusparse_cusparse)); 43309566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_CHOLESKY,MatGetFactor_seqaijcusparse_cusparse)); 43319566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_ILU,MatGetFactor_seqaijcusparse_cusparse)); 43329566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_ICC,MatGetFactor_seqaijcusparse_cusparse)); 4333bddcd29dSMark Adams 433442c9c57cSBarry Smith PetscFunctionReturn(0); 433542c9c57cSBarry Smith } 433629b38603SBarry Smith 4337cbc6b225SStefano Zampini static PetscErrorCode MatResetPreallocationCOO_SeqAIJCUSPARSE(Mat mat) 4338cbc6b225SStefano Zampini { 4339cbc6b225SStefano Zampini Mat_SeqAIJCUSPARSE* cusp = (Mat_SeqAIJCUSPARSE*)mat->spptr; 4340cbc6b225SStefano Zampini 4341cbc6b225SStefano Zampini PetscFunctionBegin; 4342cbc6b225SStefano Zampini if (!cusp) PetscFunctionReturn(0); 4343cbc6b225SStefano Zampini delete cusp->cooPerm; 4344cbc6b225SStefano Zampini delete cusp->cooPerm_a; 4345cbc6b225SStefano Zampini cusp->cooPerm = NULL; 4346cbc6b225SStefano Zampini cusp->cooPerm_a = NULL; 4347cbc6b225SStefano Zampini if (cusp->use_extended_coo) { 43489566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(cusp->jmap_d)); 43499566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(cusp->perm_d)); 4350cbc6b225SStefano Zampini } 4351cbc6b225SStefano Zampini cusp->use_extended_coo = PETSC_FALSE; 4352cbc6b225SStefano Zampini PetscFunctionReturn(0); 4353cbc6b225SStefano Zampini } 4354cbc6b225SStefano Zampini 4355470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSE_Destroy(Mat_SeqAIJCUSPARSE **cusparsestruct) 43567f756511SDominic Meiser { 43577f756511SDominic Meiser PetscFunctionBegin; 43587f756511SDominic Meiser if (*cusparsestruct) { 43599566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEMultStruct_Destroy(&(*cusparsestruct)->mat,(*cusparsestruct)->format)); 43609566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEMultStruct_Destroy(&(*cusparsestruct)->matTranspose,(*cusparsestruct)->format)); 43617f756511SDominic Meiser delete (*cusparsestruct)->workVector; 436281902715SJunchao Zhang delete (*cusparsestruct)->rowoffsets_gpu; 43637e8381f9SStefano Zampini delete (*cusparsestruct)->cooPerm; 43647e8381f9SStefano Zampini delete (*cusparsestruct)->cooPerm_a; 4365a49f1ed0SStefano Zampini delete (*cusparsestruct)->csr2csc_i; 43669566063dSJacob Faibussowitsch if ((*cusparsestruct)->handle) PetscCallCUSPARSE(cusparseDestroy((*cusparsestruct)->handle)); 43679566063dSJacob Faibussowitsch if ((*cusparsestruct)->jmap_d) PetscCallCUDA(cudaFree((*cusparsestruct)->jmap_d)); 43689566063dSJacob Faibussowitsch if ((*cusparsestruct)->perm_d) PetscCallCUDA(cudaFree((*cusparsestruct)->perm_d)); 43699566063dSJacob Faibussowitsch PetscCall(PetscFree(*cusparsestruct)); 43707f756511SDominic Meiser } 43717f756511SDominic Meiser PetscFunctionReturn(0); 43727f756511SDominic Meiser } 43737f756511SDominic Meiser 43747f756511SDominic Meiser static PetscErrorCode CsrMatrix_Destroy(CsrMatrix **mat) 43757f756511SDominic Meiser { 43767f756511SDominic Meiser PetscFunctionBegin; 43777f756511SDominic Meiser if (*mat) { 43787f756511SDominic Meiser delete (*mat)->values; 43797f756511SDominic Meiser delete (*mat)->column_indices; 43807f756511SDominic Meiser delete (*mat)->row_offsets; 43817f756511SDominic Meiser delete *mat; 43827f756511SDominic Meiser *mat = 0; 43837f756511SDominic Meiser } 43847f756511SDominic Meiser PetscFunctionReturn(0); 43857f756511SDominic Meiser } 43867f756511SDominic Meiser 4387470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSETriFactorStruct **trifactor) 43887f756511SDominic Meiser { 43897f756511SDominic Meiser PetscFunctionBegin; 43907f756511SDominic Meiser if (*trifactor) { 43919566063dSJacob Faibussowitsch if ((*trifactor)->descr) PetscCallCUSPARSE(cusparseDestroyMatDescr((*trifactor)->descr)); 4392261a78b4SJunchao Zhang if ((*trifactor)->solveInfo) PetscCallCUSPARSE(cusparseDestroyCsrsvInfo((*trifactor)->solveInfo)); 43939566063dSJacob Faibussowitsch PetscCall(CsrMatrix_Destroy(&(*trifactor)->csrMat)); 43949566063dSJacob Faibussowitsch if ((*trifactor)->solveBuffer) PetscCallCUDA(cudaFree((*trifactor)->solveBuffer)); 43959566063dSJacob Faibussowitsch if ((*trifactor)->AA_h) PetscCallCUDA(cudaFreeHost((*trifactor)->AA_h)); 4396afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 43979566063dSJacob Faibussowitsch if ((*trifactor)->csr2cscBuffer) PetscCallCUDA(cudaFree((*trifactor)->csr2cscBuffer)); 4398afb2bd1cSJunchao Zhang #endif 43999566063dSJacob Faibussowitsch PetscCall(PetscFree(*trifactor)); 44007f756511SDominic Meiser } 44017f756511SDominic Meiser PetscFunctionReturn(0); 44027f756511SDominic Meiser } 44037f756511SDominic Meiser 4404470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSEMultStruct **matstruct,MatCUSPARSEStorageFormat format) 44057f756511SDominic Meiser { 44067f756511SDominic Meiser CsrMatrix *mat; 44077f756511SDominic Meiser 44087f756511SDominic Meiser PetscFunctionBegin; 44097f756511SDominic Meiser if (*matstruct) { 44107f756511SDominic Meiser if ((*matstruct)->mat) { 44117f756511SDominic Meiser if (format==MAT_CUSPARSE_ELL || format==MAT_CUSPARSE_HYB) { 4412afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 4413afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 4414afb2bd1cSJunchao Zhang #else 44157f756511SDominic Meiser cusparseHybMat_t hybMat = (cusparseHybMat_t)(*matstruct)->mat; 44169566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseDestroyHybMat(hybMat)); 4417afb2bd1cSJunchao Zhang #endif 44187f756511SDominic Meiser } else { 44197f756511SDominic Meiser mat = (CsrMatrix*)(*matstruct)->mat; 44207f756511SDominic Meiser CsrMatrix_Destroy(&mat); 44217f756511SDominic Meiser } 44227f756511SDominic Meiser } 44239566063dSJacob Faibussowitsch if ((*matstruct)->descr) PetscCallCUSPARSE(cusparseDestroyMatDescr((*matstruct)->descr)); 44247f756511SDominic Meiser delete (*matstruct)->cprowIndices; 44259566063dSJacob Faibussowitsch if ((*matstruct)->alpha_one) PetscCallCUDA(cudaFree((*matstruct)->alpha_one)); 44269566063dSJacob Faibussowitsch if ((*matstruct)->beta_zero) PetscCallCUDA(cudaFree((*matstruct)->beta_zero)); 44279566063dSJacob Faibussowitsch if ((*matstruct)->beta_one) PetscCallCUDA(cudaFree((*matstruct)->beta_one)); 4428afb2bd1cSJunchao Zhang 4429afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 4430afb2bd1cSJunchao Zhang Mat_SeqAIJCUSPARSEMultStruct *mdata = *matstruct; 44319566063dSJacob Faibussowitsch if (mdata->matDescr) PetscCallCUSPARSE(cusparseDestroySpMat(mdata->matDescr)); 4432afb2bd1cSJunchao Zhang for (int i=0; i<3; i++) { 4433afb2bd1cSJunchao Zhang if (mdata->cuSpMV[i].initialized) { 44349566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(mdata->cuSpMV[i].spmvBuffer)); 44359566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseDestroyDnVec(mdata->cuSpMV[i].vecXDescr)); 44369566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseDestroyDnVec(mdata->cuSpMV[i].vecYDescr)); 4437afb2bd1cSJunchao Zhang } 4438afb2bd1cSJunchao Zhang } 4439afb2bd1cSJunchao Zhang #endif 44407f756511SDominic Meiser delete *matstruct; 44417e8381f9SStefano Zampini *matstruct = NULL; 44427f756511SDominic Meiser } 44437f756511SDominic Meiser PetscFunctionReturn(0); 44447f756511SDominic Meiser } 44457f756511SDominic Meiser 4446e8d2b73aSMark Adams PetscErrorCode MatSeqAIJCUSPARSETriFactors_Reset(Mat_SeqAIJCUSPARSETriFactors_p* trifactors) 44477f756511SDominic Meiser { 4448da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *fs = *trifactors; 4449da112707SJunchao Zhang 44507f756511SDominic Meiser PetscFunctionBegin; 4451da112707SJunchao Zhang if (fs) { 4452da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSEMultStruct_Destroy(&fs->loTriFactorPtr)); 4453da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSEMultStruct_Destroy(&fs->upTriFactorPtr)); 4454da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSEMultStruct_Destroy(&fs->loTriFactorPtrTranspose)); 4455da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSEMultStruct_Destroy(&fs->upTriFactorPtrTranspose)); 4456da112707SJunchao Zhang delete fs->rpermIndices; 4457da112707SJunchao Zhang delete fs->cpermIndices; 4458da112707SJunchao Zhang delete fs->workVector; 4459da112707SJunchao Zhang fs->rpermIndices = NULL; 4460da112707SJunchao Zhang fs->cpermIndices = NULL; 4461da112707SJunchao Zhang fs->workVector = NULL; 4462da112707SJunchao Zhang if (fs->a_band_d) PetscCallCUDA(cudaFree(fs->a_band_d)); 4463da112707SJunchao Zhang if (fs->i_band_d) PetscCallCUDA(cudaFree(fs->i_band_d)); 4464da112707SJunchao Zhang fs->init_dev_prop = PETSC_FALSE; 4465da112707SJunchao Zhang #if CUSPARSE_VERSION >= 11500 4466da112707SJunchao Zhang PetscCallCUDA(cudaFree(fs->csrRowPtr)); 4467da112707SJunchao Zhang PetscCallCUDA(cudaFree(fs->csrColIdx)); 4468da112707SJunchao Zhang PetscCallCUDA(cudaFree(fs->csrVal)); 4469da112707SJunchao Zhang PetscCallCUDA(cudaFree(fs->X)); 4470da112707SJunchao Zhang PetscCallCUDA(cudaFree(fs->Y)); 4471da112707SJunchao Zhang PetscCallCUDA(cudaFree(fs->factBuffer_M)); 4472da112707SJunchao Zhang PetscCallCUDA(cudaFree(fs->spsvBuffer_L)); 4473da112707SJunchao Zhang PetscCallCUDA(cudaFree(fs->spsvBuffer_Lt)); 4474da112707SJunchao Zhang PetscCallCUDA(cudaFree(fs->spsvBuffer_U)); 4475da112707SJunchao Zhang PetscCallCUDA(cudaFree(fs->spsvBuffer_Ut)); 4476da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDestroyMatDescr(fs->matDescr_M)); 4477da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDestroySpMat(fs->spMatDescr_L)); 4478da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDestroySpMat(fs->spMatDescr_U)); 4479da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_destroyDescr(fs->spsvDescr_L)); 4480da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_destroyDescr(fs->spsvDescr_Lt)); 4481da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_destroyDescr(fs->spsvDescr_U)); 4482da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_destroyDescr(fs->spsvDescr_Ut)); 4483da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDestroyDnVec(fs->dnVecDescr_X)); 4484da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDestroyDnVec(fs->dnVecDescr_Y)); 4485da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDestroyCsrilu02Info(fs->ilu0Info_M)); 4486da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDestroyCsric02Info(fs->ic0Info_M)); 4487da112707SJunchao Zhang fs->builtSolveTranspose = PETSC_FALSE; 4488da112707SJunchao Zhang #endif 4489ccdfe979SStefano Zampini } 4490ccdfe979SStefano Zampini PetscFunctionReturn(0); 4491ccdfe979SStefano Zampini } 4492ccdfe979SStefano Zampini 4493ccdfe979SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSETriFactors_Destroy(Mat_SeqAIJCUSPARSETriFactors** trifactors) 4494ccdfe979SStefano Zampini { 4495ccdfe979SStefano Zampini cusparseHandle_t handle; 4496ccdfe979SStefano Zampini 4497ccdfe979SStefano Zampini PetscFunctionBegin; 4498ccdfe979SStefano Zampini if (*trifactors) { 44999566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSETriFactors_Reset(trifactors)); 45007f756511SDominic Meiser if (handle = (*trifactors)->handle) { 45019566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseDestroy(handle)); 45027f756511SDominic Meiser } 45039566063dSJacob Faibussowitsch PetscCall(PetscFree(*trifactors)); 45047f756511SDominic Meiser } 45057f756511SDominic Meiser PetscFunctionReturn(0); 45067f756511SDominic Meiser } 45077e8381f9SStefano Zampini 45087e8381f9SStefano Zampini struct IJCompare 45097e8381f9SStefano Zampini { 45107e8381f9SStefano Zampini __host__ __device__ 45117e8381f9SStefano Zampini inline bool operator() (const thrust::tuple<PetscInt, PetscInt> &t1, const thrust::tuple<PetscInt, PetscInt> &t2) 45127e8381f9SStefano Zampini { 45137e8381f9SStefano Zampini if (t1.get<0>() < t2.get<0>()) return true; 45147e8381f9SStefano Zampini if (t1.get<0>() == t2.get<0>()) return t1.get<1>() < t2.get<1>(); 45157e8381f9SStefano Zampini return false; 45167e8381f9SStefano Zampini } 45177e8381f9SStefano Zampini }; 45187e8381f9SStefano Zampini 45197e8381f9SStefano Zampini struct IJEqual 45207e8381f9SStefano Zampini { 45217e8381f9SStefano Zampini __host__ __device__ 45227e8381f9SStefano Zampini inline bool operator() (const thrust::tuple<PetscInt, PetscInt> &t1, const thrust::tuple<PetscInt, PetscInt> &t2) 45237e8381f9SStefano Zampini { 45247e8381f9SStefano Zampini if (t1.get<0>() != t2.get<0>() || t1.get<1>() != t2.get<1>()) return false; 45257e8381f9SStefano Zampini return true; 45267e8381f9SStefano Zampini } 45277e8381f9SStefano Zampini }; 45287e8381f9SStefano Zampini 45297e8381f9SStefano Zampini struct IJDiff 45307e8381f9SStefano Zampini { 45317e8381f9SStefano Zampini __host__ __device__ 45327e8381f9SStefano Zampini inline PetscInt operator() (const PetscInt &t1, const PetscInt &t2) 45337e8381f9SStefano Zampini { 45347e8381f9SStefano Zampini return t1 == t2 ? 0 : 1; 45357e8381f9SStefano Zampini } 45367e8381f9SStefano Zampini }; 45377e8381f9SStefano Zampini 45387e8381f9SStefano Zampini struct IJSum 45397e8381f9SStefano Zampini { 45407e8381f9SStefano Zampini __host__ __device__ 45417e8381f9SStefano Zampini inline PetscInt operator() (const PetscInt &t1, const PetscInt &t2) 45427e8381f9SStefano Zampini { 45437e8381f9SStefano Zampini return t1||t2; 45447e8381f9SStefano Zampini } 45457e8381f9SStefano Zampini }; 45467e8381f9SStefano Zampini 45477e8381f9SStefano Zampini #include <thrust/iterator/discard_iterator.h> 4548219fbbafSJunchao Zhang /* Associated with MatSetPreallocationCOO_SeqAIJCUSPARSE_Basic() */ 4549219fbbafSJunchao Zhang PetscErrorCode MatSetValuesCOO_SeqAIJCUSPARSE_Basic(Mat A, const PetscScalar v[], InsertMode imode) 45507e8381f9SStefano Zampini { 45517e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 4552fcdce8c4SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 4553bfcc3627SStefano Zampini THRUSTARRAY *cooPerm_v = NULL; 455408391a17SStefano Zampini thrust::device_ptr<const PetscScalar> d_v; 45557e8381f9SStefano Zampini CsrMatrix *matrix; 45567e8381f9SStefano Zampini PetscInt n; 45577e8381f9SStefano Zampini 45587e8381f9SStefano Zampini PetscFunctionBegin; 455928b400f6SJacob Faibussowitsch PetscCheck(cusp,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUSPARSE struct"); 456028b400f6SJacob Faibussowitsch PetscCheck(cusp->mat,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUSPARSE CsrMatrix"); 45617e8381f9SStefano Zampini if (!cusp->cooPerm) { 45629566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY)); 45639566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY)); 45647e8381f9SStefano Zampini PetscFunctionReturn(0); 45657e8381f9SStefano Zampini } 45667e8381f9SStefano Zampini matrix = (CsrMatrix*)cusp->mat->mat; 456728b400f6SJacob Faibussowitsch PetscCheck(matrix->values,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 4568e61fc153SStefano Zampini if (!v) { 4569e61fc153SStefano Zampini if (imode == INSERT_VALUES) thrust::fill(thrust::device,matrix->values->begin(),matrix->values->end(),0.); 4570e61fc153SStefano Zampini goto finalize; 45717e8381f9SStefano Zampini } 4572e61fc153SStefano Zampini n = cusp->cooPerm->size(); 457308391a17SStefano Zampini if (isCudaMem(v)) { 457408391a17SStefano Zampini d_v = thrust::device_pointer_cast(v); 457508391a17SStefano Zampini } else { 4576e61fc153SStefano Zampini cooPerm_v = new THRUSTARRAY(n); 4577e61fc153SStefano Zampini cooPerm_v->assign(v,v+n); 457808391a17SStefano Zampini d_v = cooPerm_v->data(); 45799566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(n*sizeof(PetscScalar))); 458008391a17SStefano Zampini } 45819566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 4582e61fc153SStefano Zampini if (imode == ADD_VALUES) { /* ADD VALUES means add to existing ones */ 4583ddea5d60SJunchao Zhang if (cusp->cooPerm_a) { /* there are repeated entries in d_v[], and we need to add these them */ 4584bfcc3627SStefano Zampini THRUSTARRAY *cooPerm_w = new THRUSTARRAY(matrix->values->size()); 458508391a17SStefano Zampini auto vbit = thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()); 4586ddea5d60SJunchao Zhang /* thrust::reduce_by_key(keys_first,keys_last,values_first,keys_output,values_output) 4587ddea5d60SJunchao Zhang cooPerm_a = [0,0,1,2,3,4]. The length is n, number of nonozeros in d_v[]. 4588ddea5d60SJunchao Zhang cooPerm_a is ordered. d_v[i] is the cooPerm_a[i]-th unique nonzero. 4589ddea5d60SJunchao Zhang */ 4590e61fc153SStefano Zampini thrust::reduce_by_key(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),vbit,thrust::make_discard_iterator(),cooPerm_w->begin(),thrust::equal_to<PetscInt>(),thrust::plus<PetscScalar>()); 4591e61fc153SStefano Zampini thrust::transform(cooPerm_w->begin(),cooPerm_w->end(),matrix->values->begin(),matrix->values->begin(),thrust::plus<PetscScalar>()); 4592e61fc153SStefano Zampini delete cooPerm_w; 45937e8381f9SStefano Zampini } else { 4594ddea5d60SJunchao Zhang /* all nonzeros in d_v[] are unique entries */ 459508391a17SStefano Zampini auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()), 45967e8381f9SStefano Zampini matrix->values->begin())); 459708391a17SStefano Zampini auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->end()), 45987e8381f9SStefano Zampini matrix->values->end())); 4599ddea5d60SJunchao Zhang thrust::for_each(zibit,zieit,VecCUDAPlusEquals()); /* values[i] += d_v[cooPerm[i]] */ 46007e8381f9SStefano Zampini } 46017e8381f9SStefano Zampini } else { 4602e61fc153SStefano Zampini if (cusp->cooPerm_a) { /* repeated entries in COO, with INSERT_VALUES -> reduce */ 460308391a17SStefano Zampini auto vbit = thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()); 4604e61fc153SStefano Zampini thrust::reduce_by_key(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),vbit,thrust::make_discard_iterator(),matrix->values->begin(),thrust::equal_to<PetscInt>(),thrust::plus<PetscScalar>()); 46057e8381f9SStefano Zampini } else { 460608391a17SStefano Zampini auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()), 46077e8381f9SStefano Zampini matrix->values->begin())); 460808391a17SStefano Zampini auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->end()), 46097e8381f9SStefano Zampini matrix->values->end())); 46107e8381f9SStefano Zampini thrust::for_each(zibit,zieit,VecCUDAEquals()); 46117e8381f9SStefano Zampini } 46127e8381f9SStefano Zampini } 46139566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 4614e61fc153SStefano Zampini finalize: 4615e61fc153SStefano Zampini delete cooPerm_v; 46167e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 46179566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)A)); 4618fcdce8c4SStefano Zampini /* shorter version of MatAssemblyEnd_SeqAIJ */ 46199566063dSJacob Faibussowitsch PetscCall(PetscInfo(A,"Matrix size: %" PetscInt_FMT " X %" PetscInt_FMT "; storage space: 0 unneeded,%" PetscInt_FMT " used\n",A->rmap->n,A->cmap->n,a->nz)); 46209566063dSJacob Faibussowitsch PetscCall(PetscInfo(A,"Number of mallocs during MatSetValues() is 0\n")); 46219566063dSJacob Faibussowitsch PetscCall(PetscInfo(A,"Maximum nonzeros in any row is %" PetscInt_FMT "\n",a->rmax)); 4622fcdce8c4SStefano Zampini a->reallocs = 0; 4623fcdce8c4SStefano Zampini A->info.mallocs += 0; 4624fcdce8c4SStefano Zampini A->info.nz_unneeded = 0; 4625fcdce8c4SStefano Zampini A->assembled = A->was_assembled = PETSC_TRUE; 4626fcdce8c4SStefano Zampini A->num_ass++; 46277e8381f9SStefano Zampini PetscFunctionReturn(0); 46287e8381f9SStefano Zampini } 46297e8381f9SStefano Zampini 4630a49f1ed0SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEInvalidateTranspose(Mat A, PetscBool destroy) 4631a49f1ed0SStefano Zampini { 4632a49f1ed0SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 4633a49f1ed0SStefano Zampini 4634a49f1ed0SStefano Zampini PetscFunctionBegin; 4635a49f1ed0SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 4636a49f1ed0SStefano Zampini if (!cusp) PetscFunctionReturn(0); 4637a49f1ed0SStefano Zampini if (destroy) { 46389566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEMultStruct_Destroy(&cusp->matTranspose,cusp->format)); 4639a49f1ed0SStefano Zampini delete cusp->csr2csc_i; 4640a49f1ed0SStefano Zampini cusp->csr2csc_i = NULL; 4641a49f1ed0SStefano Zampini } 46421a2c6b5cSJunchao Zhang A->transupdated = PETSC_FALSE; 4643a49f1ed0SStefano Zampini PetscFunctionReturn(0); 4644a49f1ed0SStefano Zampini } 4645a49f1ed0SStefano Zampini 46467e8381f9SStefano Zampini #include <thrust/binary_search.h> 4647219fbbafSJunchao Zhang /* 'Basic' means it only works when coo_i[] and coo_j[] do not contain negative indices */ 4648219fbbafSJunchao Zhang PetscErrorCode MatSetPreallocationCOO_SeqAIJCUSPARSE_Basic(Mat A, PetscCount n, const PetscInt coo_i[], const PetscInt coo_j[]) 46497e8381f9SStefano Zampini { 46507e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 46517e8381f9SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 46527e8381f9SStefano Zampini PetscInt cooPerm_n, nzr = 0; 46537e8381f9SStefano Zampini 46547e8381f9SStefano Zampini PetscFunctionBegin; 46559566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 46569566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 46577e8381f9SStefano Zampini cooPerm_n = cusp->cooPerm ? cusp->cooPerm->size() : 0; 46587e8381f9SStefano Zampini if (n != cooPerm_n) { 46597e8381f9SStefano Zampini delete cusp->cooPerm; 46607e8381f9SStefano Zampini delete cusp->cooPerm_a; 46617e8381f9SStefano Zampini cusp->cooPerm = NULL; 46627e8381f9SStefano Zampini cusp->cooPerm_a = NULL; 46637e8381f9SStefano Zampini } 46647e8381f9SStefano Zampini if (n) { 46657e8381f9SStefano Zampini THRUSTINTARRAY d_i(n); 46667e8381f9SStefano Zampini THRUSTINTARRAY d_j(n); 46677e8381f9SStefano Zampini THRUSTINTARRAY ii(A->rmap->n); 46687e8381f9SStefano Zampini 46697e8381f9SStefano Zampini if (!cusp->cooPerm) { cusp->cooPerm = new THRUSTINTARRAY(n); } 46707e8381f9SStefano Zampini if (!cusp->cooPerm_a) { cusp->cooPerm_a = new THRUSTINTARRAY(n); } 46717e8381f9SStefano Zampini 46729566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(2.*n*sizeof(PetscInt))); 46737e8381f9SStefano Zampini d_i.assign(coo_i,coo_i+n); 46747e8381f9SStefano Zampini d_j.assign(coo_j,coo_j+n); 4675ddea5d60SJunchao Zhang 4676ddea5d60SJunchao Zhang /* Ex. 4677ddea5d60SJunchao Zhang n = 6 4678ddea5d60SJunchao Zhang coo_i = [3,3,1,4,1,4] 4679ddea5d60SJunchao Zhang coo_j = [3,2,2,5,2,6] 4680ddea5d60SJunchao Zhang */ 46817e8381f9SStefano Zampini auto fkey = thrust::make_zip_iterator(thrust::make_tuple(d_i.begin(),d_j.begin())); 46827e8381f9SStefano Zampini auto ekey = thrust::make_zip_iterator(thrust::make_tuple(d_i.end(),d_j.end())); 46837e8381f9SStefano Zampini 46849566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 46857e8381f9SStefano Zampini thrust::sequence(thrust::device, cusp->cooPerm->begin(), cusp->cooPerm->end(), 0); 4686ddea5d60SJunchao Zhang thrust::sort_by_key(fkey, ekey, cusp->cooPerm->begin(), IJCompare()); /* sort by row, then by col */ 4687ddea5d60SJunchao Zhang *cusp->cooPerm_a = d_i; /* copy the sorted array */ 46887e8381f9SStefano Zampini THRUSTINTARRAY w = d_j; 46897e8381f9SStefano Zampini 4690ddea5d60SJunchao Zhang /* 4691ddea5d60SJunchao Zhang d_i = [1,1,3,3,4,4] 4692ddea5d60SJunchao Zhang d_j = [2,2,2,3,5,6] 4693ddea5d60SJunchao Zhang cooPerm = [2,4,1,0,3,5] 4694ddea5d60SJunchao Zhang */ 4695ddea5d60SJunchao Zhang auto nekey = thrust::unique(fkey, ekey, IJEqual()); /* unique (d_i, d_j) */ 4696ddea5d60SJunchao Zhang 4697ddea5d60SJunchao Zhang /* 4698ddea5d60SJunchao Zhang d_i = [1,3,3,4,4,x] 4699ddea5d60SJunchao Zhang ^ekey 4700ddea5d60SJunchao Zhang d_j = [2,2,3,5,6,x] 4701ddea5d60SJunchao Zhang ^nekye 4702ddea5d60SJunchao Zhang */ 47037e8381f9SStefano Zampini if (nekey == ekey) { /* all entries are unique */ 47047e8381f9SStefano Zampini delete cusp->cooPerm_a; 47057e8381f9SStefano Zampini cusp->cooPerm_a = NULL; 4706ddea5d60SJunchao Zhang } else { /* Stefano: I couldn't come up with a more elegant algorithm */ 4707ddea5d60SJunchao Zhang /* idea: any change in i or j in the (i,j) sequence implies a new nonzero */ 4708ddea5d60SJunchao Zhang adjacent_difference(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),cusp->cooPerm_a->begin(),IJDiff()); /* cooPerm_a: [1,1,3,3,4,4] => [1,0,1,0,1,0]*/ 4709ddea5d60SJunchao Zhang adjacent_difference(w.begin(),w.end(),w.begin(),IJDiff()); /* w: [2,2,2,3,5,6] => [2,0,0,1,1,1]*/ 4710ddea5d60SJunchao Zhang (*cusp->cooPerm_a)[0] = 0; /* clear the first entry, though accessing an entry on device implies a cudaMemcpy */ 47117e8381f9SStefano Zampini w[0] = 0; 4712ddea5d60SJunchao Zhang thrust::transform(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),w.begin(),cusp->cooPerm_a->begin(),IJSum()); /* cooPerm_a = [0,0,1,1,1,1]*/ 4713ddea5d60SJunchao Zhang thrust::inclusive_scan(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),cusp->cooPerm_a->begin(),thrust::plus<PetscInt>()); /*cooPerm_a=[0,0,1,2,3,4]*/ 47147e8381f9SStefano Zampini } 47157e8381f9SStefano Zampini thrust::counting_iterator<PetscInt> search_begin(0); 4716ddea5d60SJunchao Zhang thrust::upper_bound(d_i.begin(), nekey.get_iterator_tuple().get<0>(), /* binary search entries of [0,1,2,3,4,5,6) in ordered array d_i = [1,3,3,4,4], supposing A->rmap->n = 6. */ 4717ddea5d60SJunchao Zhang search_begin, search_begin + A->rmap->n, /* return in ii[] the index of last position in d_i[] where value could be inserted without violating the ordering */ 4718ddea5d60SJunchao Zhang ii.begin()); /* ii = [0,1,1,3,5,5]. A leading 0 will be added later */ 47199566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 47207e8381f9SStefano Zampini 47219566063dSJacob Faibussowitsch PetscCall(MatSeqXAIJFreeAIJ(A,&a->a,&a->j,&a->i)); 47227e8381f9SStefano Zampini a->singlemalloc = PETSC_FALSE; 47237e8381f9SStefano Zampini a->free_a = PETSC_TRUE; 47247e8381f9SStefano Zampini a->free_ij = PETSC_TRUE; 47259566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(A->rmap->n+1,&a->i)); 4726ddea5d60SJunchao Zhang a->i[0] = 0; /* a->i = [0,0,1,1,3,5,5] */ 47279566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(a->i+1,ii.data().get(),A->rmap->n*sizeof(PetscInt),cudaMemcpyDeviceToHost)); 47287e8381f9SStefano Zampini a->nz = a->maxnz = a->i[A->rmap->n]; 4729fcdce8c4SStefano Zampini a->rmax = 0; 47309566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(a->nz,&a->a)); 47319566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(a->nz,&a->j)); 47329566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(a->j,d_j.data().get(),a->nz*sizeof(PetscInt),cudaMemcpyDeviceToHost)); 47339566063dSJacob Faibussowitsch if (!a->ilen) PetscCall(PetscMalloc1(A->rmap->n,&a->ilen)); 47349566063dSJacob Faibussowitsch if (!a->imax) PetscCall(PetscMalloc1(A->rmap->n,&a->imax)); 47357e8381f9SStefano Zampini for (PetscInt i = 0; i < A->rmap->n; i++) { 47367e8381f9SStefano Zampini const PetscInt nnzr = a->i[i+1] - a->i[i]; 47377e8381f9SStefano Zampini nzr += (PetscInt)!!(nnzr); 47387e8381f9SStefano Zampini a->ilen[i] = a->imax[i] = nnzr; 4739fcdce8c4SStefano Zampini a->rmax = PetscMax(a->rmax,nnzr); 47407e8381f9SStefano Zampini } 4741fcdce8c4SStefano Zampini a->nonzerorowcnt = nzr; 47427e8381f9SStefano Zampini A->preallocated = PETSC_TRUE; 47439566063dSJacob Faibussowitsch PetscCall(PetscLogGpuToCpu((A->rmap->n+a->nz)*sizeof(PetscInt))); 47449566063dSJacob Faibussowitsch PetscCall(MatMarkDiagonal_SeqAIJ(A)); 47457e8381f9SStefano Zampini } else { 47469566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation(A,0,NULL)); 47477e8381f9SStefano Zampini } 47489566063dSJacob Faibussowitsch PetscCall(MatSetOption(A,MAT_NEW_NONZERO_ALLOCATION_ERR,PETSC_TRUE)); 47497e8381f9SStefano Zampini 47507e8381f9SStefano Zampini /* We want to allocate the CUSPARSE struct for matvec now. 4751e61fc153SStefano Zampini The code is so convoluted now that I prefer to copy zeros */ 47529566063dSJacob Faibussowitsch PetscCall(PetscArrayzero(a->a,a->nz)); 47539566063dSJacob Faibussowitsch PetscCall(MatCheckCompressedRow(A,nzr,&a->compressedrow,a->i,A->rmap->n,0.6)); 47547e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_CPU; 47559566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 47569566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE)); 47577e8381f9SStefano Zampini PetscFunctionReturn(0); 47587e8381f9SStefano Zampini } 4759ed502f03SStefano Zampini 4760219fbbafSJunchao Zhang PetscErrorCode MatSetPreallocationCOO_SeqAIJCUSPARSE(Mat mat, PetscCount coo_n, const PetscInt coo_i[], const PetscInt coo_j[]) 4761219fbbafSJunchao Zhang { 4762219fbbafSJunchao Zhang Mat_SeqAIJ *seq; 4763219fbbafSJunchao Zhang Mat_SeqAIJCUSPARSE *dev; 4764cbc6b225SStefano Zampini PetscBool coo_basic = PETSC_TRUE; 4765219fbbafSJunchao Zhang PetscMemType mtype = PETSC_MEMTYPE_DEVICE; 4766219fbbafSJunchao Zhang 4767219fbbafSJunchao Zhang PetscFunctionBegin; 47689566063dSJacob Faibussowitsch PetscCall(MatResetPreallocationCOO_SeqAIJ(mat)); 47699566063dSJacob Faibussowitsch PetscCall(MatResetPreallocationCOO_SeqAIJCUSPARSE(mat)); 4770219fbbafSJunchao Zhang if (coo_i) { 47719566063dSJacob Faibussowitsch PetscCall(PetscGetMemType(coo_i,&mtype)); 4772219fbbafSJunchao Zhang if (PetscMemTypeHost(mtype)) { 4773219fbbafSJunchao Zhang for (PetscCount k=0; k<coo_n; k++) { 4774cbc6b225SStefano Zampini if (coo_i[k] < 0 || coo_j[k] < 0) {coo_basic = PETSC_FALSE; break;} 4775219fbbafSJunchao Zhang } 4776219fbbafSJunchao Zhang } 4777219fbbafSJunchao Zhang } 4778219fbbafSJunchao Zhang 4779219fbbafSJunchao Zhang if (coo_basic) { /* i,j are on device or do not contain negative indices */ 47809566063dSJacob Faibussowitsch PetscCall(MatSetPreallocationCOO_SeqAIJCUSPARSE_Basic(mat,coo_n,coo_i,coo_j)); 4781219fbbafSJunchao Zhang } else { 47829566063dSJacob Faibussowitsch PetscCall(MatSetPreallocationCOO_SeqAIJ(mat,coo_n,coo_i,coo_j)); 4783cbc6b225SStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 47849566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(mat)); 4785219fbbafSJunchao Zhang seq = static_cast<Mat_SeqAIJ*>(mat->data); 4786219fbbafSJunchao Zhang dev = static_cast<Mat_SeqAIJCUSPARSE*>(mat->spptr); 47879566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void**)&dev->jmap_d,(seq->nz+1)*sizeof(PetscCount))); 47889566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(dev->jmap_d,seq->jmap,(seq->nz+1)*sizeof(PetscCount),cudaMemcpyHostToDevice)); 47899566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void**)&dev->perm_d,seq->Atot*sizeof(PetscCount))); 47909566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(dev->perm_d,seq->perm,seq->Atot*sizeof(PetscCount),cudaMemcpyHostToDevice)); 4791219fbbafSJunchao Zhang dev->use_extended_coo = PETSC_TRUE; 4792219fbbafSJunchao Zhang } 4793219fbbafSJunchao Zhang PetscFunctionReturn(0); 4794219fbbafSJunchao Zhang } 4795219fbbafSJunchao Zhang 479677804d84SJunchao Zhang __global__ static void MatAddCOOValues(const PetscScalar kv[],PetscCount nnz,const PetscCount jmap[],const PetscCount perm[],InsertMode imode,PetscScalar a[]) 4797219fbbafSJunchao Zhang { 4798219fbbafSJunchao Zhang PetscCount i = blockIdx.x*blockDim.x + threadIdx.x; 4799219fbbafSJunchao Zhang const PetscCount grid_size = gridDim.x * blockDim.x; 4800b6c38306SJunchao Zhang for (; i<nnz; i+= grid_size) { 4801b6c38306SJunchao Zhang PetscScalar sum = 0.0; 4802b6c38306SJunchao Zhang for (PetscCount k=jmap[i]; k<jmap[i+1]; k++) sum += kv[perm[k]]; 4803b6c38306SJunchao Zhang a[i] = (imode == INSERT_VALUES? 0.0 : a[i]) + sum; 4804b6c38306SJunchao Zhang } 4805219fbbafSJunchao Zhang } 4806219fbbafSJunchao Zhang 4807219fbbafSJunchao Zhang PetscErrorCode MatSetValuesCOO_SeqAIJCUSPARSE(Mat A, const PetscScalar v[], InsertMode imode) 4808219fbbafSJunchao Zhang { 4809219fbbafSJunchao Zhang Mat_SeqAIJ *seq = (Mat_SeqAIJ*)A->data; 4810219fbbafSJunchao Zhang Mat_SeqAIJCUSPARSE *dev = (Mat_SeqAIJCUSPARSE*)A->spptr; 4811219fbbafSJunchao Zhang PetscCount Annz = seq->nz; 4812219fbbafSJunchao Zhang PetscMemType memtype; 4813219fbbafSJunchao Zhang const PetscScalar *v1 = v; 4814219fbbafSJunchao Zhang PetscScalar *Aa; 4815219fbbafSJunchao Zhang 4816219fbbafSJunchao Zhang PetscFunctionBegin; 4817219fbbafSJunchao Zhang if (dev->use_extended_coo) { 48189566063dSJacob Faibussowitsch PetscCall(PetscGetMemType(v,&memtype)); 4819219fbbafSJunchao Zhang if (PetscMemTypeHost(memtype)) { /* If user gave v[] in host, we might need to copy it to device if any */ 48209566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void**)&v1,seq->coo_n*sizeof(PetscScalar))); 48219566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy((void*)v1,v,seq->coo_n*sizeof(PetscScalar),cudaMemcpyHostToDevice)); 4822219fbbafSJunchao Zhang } 4823219fbbafSJunchao Zhang 48249566063dSJacob Faibussowitsch if (imode == INSERT_VALUES) PetscCall(MatSeqAIJCUSPARSEGetArrayWrite(A,&Aa)); 48259566063dSJacob Faibussowitsch else PetscCall(MatSeqAIJCUSPARSEGetArray(A,&Aa)); 4826219fbbafSJunchao Zhang 4827cbc6b225SStefano Zampini if (Annz) { 4828b6c38306SJunchao Zhang MatAddCOOValues<<<(Annz+255)/256,256>>>(v1,Annz,dev->jmap_d,dev->perm_d,imode,Aa); 48299566063dSJacob Faibussowitsch PetscCallCUDA(cudaPeekAtLastError()); 4830cbc6b225SStefano Zampini } 4831219fbbafSJunchao Zhang 48329566063dSJacob Faibussowitsch if (imode == INSERT_VALUES) PetscCall(MatSeqAIJCUSPARSERestoreArrayWrite(A,&Aa)); 48339566063dSJacob Faibussowitsch else PetscCall(MatSeqAIJCUSPARSERestoreArray(A,&Aa)); 4834219fbbafSJunchao Zhang 48359566063dSJacob Faibussowitsch if (PetscMemTypeHost(memtype)) PetscCallCUDA(cudaFree((void*)v1)); 4836219fbbafSJunchao Zhang } else { 48379566063dSJacob Faibussowitsch PetscCall(MatSetValuesCOO_SeqAIJCUSPARSE_Basic(A,v,imode)); 4838219fbbafSJunchao Zhang } 4839219fbbafSJunchao Zhang PetscFunctionReturn(0); 4840219fbbafSJunchao Zhang } 4841219fbbafSJunchao Zhang 48425b7e41feSStefano Zampini /*@C 48435b7e41feSStefano Zampini MatSeqAIJCUSPARSEGetIJ - returns the device row storage i and j indices for MATSEQAIJCUSPARSE matrices. 48445b7e41feSStefano Zampini 48455b7e41feSStefano Zampini Not collective 48465b7e41feSStefano Zampini 48475b7e41feSStefano Zampini Input Parameters: 48485b7e41feSStefano Zampini + A - the matrix 48495b7e41feSStefano Zampini - compressed - PETSC_TRUE or PETSC_FALSE indicating the matrix data structure should be always returned in compressed form 48505b7e41feSStefano Zampini 48515b7e41feSStefano Zampini Output Parameters: 48525b7e41feSStefano Zampini + ia - the CSR row pointers 48535b7e41feSStefano Zampini - ja - the CSR column indices 48545b7e41feSStefano Zampini 48555b7e41feSStefano Zampini Level: developer 48565b7e41feSStefano Zampini 48575b7e41feSStefano Zampini Notes: 48585b7e41feSStefano Zampini When compressed is true, the CSR structure does not contain empty rows 48595b7e41feSStefano Zampini 4860db781477SPatrick Sanan .seealso: `MatSeqAIJCUSPARSERestoreIJ()`, `MatSeqAIJCUSPARSEGetArrayRead()` 48615b7e41feSStefano Zampini @*/ 48625f101d05SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetIJ(Mat A, PetscBool compressed, const int** i, const int **j) 48635f101d05SStefano Zampini { 48645f101d05SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 48655f101d05SStefano Zampini CsrMatrix *csr; 48665f101d05SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 48675f101d05SStefano Zampini 48685f101d05SStefano Zampini PetscFunctionBegin; 48695f101d05SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 48705f101d05SStefano Zampini if (!i || !j) PetscFunctionReturn(0); 48715f101d05SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 4872aed4548fSBarry Smith PetscCheck(cusp->format != MAT_CUSPARSE_ELL && cusp->format != MAT_CUSPARSE_HYB,PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 48739566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 487428b400f6SJacob Faibussowitsch PetscCheck(cusp->mat,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 48755f101d05SStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 48765f101d05SStefano Zampini if (i) { 48775f101d05SStefano Zampini if (!compressed && a->compressedrow.use) { /* need full row offset */ 48785f101d05SStefano Zampini if (!cusp->rowoffsets_gpu) { 48795f101d05SStefano Zampini cusp->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n + 1); 48805f101d05SStefano Zampini cusp->rowoffsets_gpu->assign(a->i,a->i + A->rmap->n + 1); 48819566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu((A->rmap->n + 1)*sizeof(PetscInt))); 48825f101d05SStefano Zampini } 48835f101d05SStefano Zampini *i = cusp->rowoffsets_gpu->data().get(); 48845f101d05SStefano Zampini } else *i = csr->row_offsets->data().get(); 48855f101d05SStefano Zampini } 48865f101d05SStefano Zampini if (j) *j = csr->column_indices->data().get(); 48875f101d05SStefano Zampini PetscFunctionReturn(0); 48885f101d05SStefano Zampini } 48895f101d05SStefano Zampini 48905b7e41feSStefano Zampini /*@C 48915b7e41feSStefano Zampini MatSeqAIJCUSPARSERestoreIJ - restore the device row storage i and j indices obtained with MatSeqAIJCUSPARSEGetIJ() 48925b7e41feSStefano Zampini 48935b7e41feSStefano Zampini Not collective 48945b7e41feSStefano Zampini 48955b7e41feSStefano Zampini Input Parameters: 48965b7e41feSStefano Zampini + A - the matrix 48975b7e41feSStefano Zampini - compressed - PETSC_TRUE or PETSC_FALSE indicating the matrix data structure should be always returned in compressed form 48985b7e41feSStefano Zampini 48995b7e41feSStefano Zampini Output Parameters: 49005b7e41feSStefano Zampini + ia - the CSR row pointers 49015b7e41feSStefano Zampini - ja - the CSR column indices 49025b7e41feSStefano Zampini 49035b7e41feSStefano Zampini Level: developer 49045b7e41feSStefano Zampini 4905db781477SPatrick Sanan .seealso: `MatSeqAIJCUSPARSEGetIJ()` 49065b7e41feSStefano Zampini @*/ 49075f101d05SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreIJ(Mat A, PetscBool compressed, const int** i, const int **j) 49085f101d05SStefano Zampini { 49095f101d05SStefano Zampini PetscFunctionBegin; 49105f101d05SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 49115f101d05SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 49125f101d05SStefano Zampini if (i) *i = NULL; 49135f101d05SStefano Zampini if (j) *j = NULL; 49145f101d05SStefano Zampini PetscFunctionReturn(0); 49155f101d05SStefano Zampini } 49165f101d05SStefano Zampini 49175b7e41feSStefano Zampini /*@C 49185b7e41feSStefano Zampini MatSeqAIJCUSPARSEGetArrayRead - gives read-only access to the array where the device data for a MATSEQAIJCUSPARSE matrix is stored 49195b7e41feSStefano Zampini 49205b7e41feSStefano Zampini Not Collective 49215b7e41feSStefano Zampini 49225b7e41feSStefano Zampini Input Parameter: 49235b7e41feSStefano Zampini . A - a MATSEQAIJCUSPARSE matrix 49245b7e41feSStefano Zampini 49255b7e41feSStefano Zampini Output Parameter: 49265b7e41feSStefano Zampini . a - pointer to the device data 49275b7e41feSStefano Zampini 49285b7e41feSStefano Zampini Level: developer 49295b7e41feSStefano Zampini 49305b7e41feSStefano Zampini Notes: may trigger host-device copies if up-to-date matrix data is on host 49315b7e41feSStefano Zampini 4932db781477SPatrick Sanan .seealso: `MatSeqAIJCUSPARSEGetArray()`, `MatSeqAIJCUSPARSEGetArrayWrite()`, `MatSeqAIJCUSPARSERestoreArrayRead()` 49335b7e41feSStefano Zampini @*/ 4934ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetArrayRead(Mat A, const PetscScalar** a) 4935ed502f03SStefano Zampini { 4936ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 4937ed502f03SStefano Zampini CsrMatrix *csr; 4938ed502f03SStefano Zampini 4939ed502f03SStefano Zampini PetscFunctionBegin; 4940ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 4941ed502f03SStefano Zampini PetscValidPointer(a,2); 4942ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 4943aed4548fSBarry Smith PetscCheck(cusp->format != MAT_CUSPARSE_ELL && cusp->format != MAT_CUSPARSE_HYB,PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 49449566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 494528b400f6SJacob Faibussowitsch PetscCheck(cusp->mat,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 4946ed502f03SStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 494728b400f6SJacob Faibussowitsch PetscCheck(csr->values,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 4948ed502f03SStefano Zampini *a = csr->values->data().get(); 4949ed502f03SStefano Zampini PetscFunctionReturn(0); 4950ed502f03SStefano Zampini } 4951ed502f03SStefano Zampini 49525b7e41feSStefano Zampini /*@C 49535b7e41feSStefano Zampini MatSeqAIJCUSPARSERestoreArrayRead - restore the read-only access array obtained from MatSeqAIJCUSPARSEGetArrayRead() 49545b7e41feSStefano Zampini 49555b7e41feSStefano Zampini Not Collective 49565b7e41feSStefano Zampini 49575b7e41feSStefano Zampini Input Parameter: 49585b7e41feSStefano Zampini . A - a MATSEQAIJCUSPARSE matrix 49595b7e41feSStefano Zampini 49605b7e41feSStefano Zampini Output Parameter: 49615b7e41feSStefano Zampini . a - pointer to the device data 49625b7e41feSStefano Zampini 49635b7e41feSStefano Zampini Level: developer 49645b7e41feSStefano Zampini 4965db781477SPatrick Sanan .seealso: `MatSeqAIJCUSPARSEGetArrayRead()` 49665b7e41feSStefano Zampini @*/ 4967ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreArrayRead(Mat A, const PetscScalar** a) 4968ed502f03SStefano Zampini { 4969ed502f03SStefano Zampini PetscFunctionBegin; 4970ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 4971ed502f03SStefano Zampini PetscValidPointer(a,2); 4972ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 4973ed502f03SStefano Zampini *a = NULL; 4974ed502f03SStefano Zampini PetscFunctionReturn(0); 4975ed502f03SStefano Zampini } 4976ed502f03SStefano Zampini 49775b7e41feSStefano Zampini /*@C 49785b7e41feSStefano Zampini MatSeqAIJCUSPARSEGetArray - gives read-write access to the array where the device data for a MATSEQAIJCUSPARSE matrix is stored 49795b7e41feSStefano Zampini 49805b7e41feSStefano Zampini Not Collective 49815b7e41feSStefano Zampini 49825b7e41feSStefano Zampini Input Parameter: 49835b7e41feSStefano Zampini . A - a MATSEQAIJCUSPARSE matrix 49845b7e41feSStefano Zampini 49855b7e41feSStefano Zampini Output Parameter: 49865b7e41feSStefano Zampini . a - pointer to the device data 49875b7e41feSStefano Zampini 49885b7e41feSStefano Zampini Level: developer 49895b7e41feSStefano Zampini 49905b7e41feSStefano Zampini Notes: may trigger host-device copies if up-to-date matrix data is on host 49915b7e41feSStefano Zampini 4992db781477SPatrick Sanan .seealso: `MatSeqAIJCUSPARSEGetArrayRead()`, `MatSeqAIJCUSPARSEGetArrayWrite()`, `MatSeqAIJCUSPARSERestoreArray()` 49935b7e41feSStefano Zampini @*/ 4994039c6fbaSStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetArray(Mat A, PetscScalar** a) 4995039c6fbaSStefano Zampini { 4996039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 4997039c6fbaSStefano Zampini CsrMatrix *csr; 4998039c6fbaSStefano Zampini 4999039c6fbaSStefano Zampini PetscFunctionBegin; 5000039c6fbaSStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 5001039c6fbaSStefano Zampini PetscValidPointer(a,2); 5002039c6fbaSStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 5003aed4548fSBarry Smith PetscCheck(cusp->format != MAT_CUSPARSE_ELL && cusp->format != MAT_CUSPARSE_HYB,PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 50049566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 500528b400f6SJacob Faibussowitsch PetscCheck(cusp->mat,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 5006039c6fbaSStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 500728b400f6SJacob Faibussowitsch PetscCheck(csr->values,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 5008039c6fbaSStefano Zampini *a = csr->values->data().get(); 5009039c6fbaSStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 50109566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_FALSE)); 5011039c6fbaSStefano Zampini PetscFunctionReturn(0); 5012039c6fbaSStefano Zampini } 50135b7e41feSStefano Zampini /*@C 50145b7e41feSStefano Zampini MatSeqAIJCUSPARSERestoreArray - restore the read-write access array obtained from MatSeqAIJCUSPARSEGetArray() 5015039c6fbaSStefano Zampini 50165b7e41feSStefano Zampini Not Collective 50175b7e41feSStefano Zampini 50185b7e41feSStefano Zampini Input Parameter: 50195b7e41feSStefano Zampini . A - a MATSEQAIJCUSPARSE matrix 50205b7e41feSStefano Zampini 50215b7e41feSStefano Zampini Output Parameter: 50225b7e41feSStefano Zampini . a - pointer to the device data 50235b7e41feSStefano Zampini 50245b7e41feSStefano Zampini Level: developer 50255b7e41feSStefano Zampini 5026db781477SPatrick Sanan .seealso: `MatSeqAIJCUSPARSEGetArray()` 50275b7e41feSStefano Zampini @*/ 5028039c6fbaSStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreArray(Mat A, PetscScalar** a) 5029039c6fbaSStefano Zampini { 5030039c6fbaSStefano Zampini PetscFunctionBegin; 5031039c6fbaSStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 5032039c6fbaSStefano Zampini PetscValidPointer(a,2); 5033039c6fbaSStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 50349566063dSJacob Faibussowitsch PetscCall(MatSeqAIJInvalidateDiagonal(A)); 50359566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)A)); 5036039c6fbaSStefano Zampini *a = NULL; 5037039c6fbaSStefano Zampini PetscFunctionReturn(0); 5038039c6fbaSStefano Zampini } 5039039c6fbaSStefano Zampini 50405b7e41feSStefano Zampini /*@C 50415b7e41feSStefano Zampini MatSeqAIJCUSPARSEGetArrayWrite - gives write access to the array where the device data for a MATSEQAIJCUSPARSE matrix is stored 50425b7e41feSStefano Zampini 50435b7e41feSStefano Zampini Not Collective 50445b7e41feSStefano Zampini 50455b7e41feSStefano Zampini Input Parameter: 50465b7e41feSStefano Zampini . A - a MATSEQAIJCUSPARSE matrix 50475b7e41feSStefano Zampini 50485b7e41feSStefano Zampini Output Parameter: 50495b7e41feSStefano Zampini . a - pointer to the device data 50505b7e41feSStefano Zampini 50515b7e41feSStefano Zampini Level: developer 50525b7e41feSStefano Zampini 50535b7e41feSStefano Zampini Notes: does not trigger host-device copies and flags data validity on the GPU 50545b7e41feSStefano Zampini 5055db781477SPatrick Sanan .seealso: `MatSeqAIJCUSPARSEGetArray()`, `MatSeqAIJCUSPARSEGetArrayRead()`, `MatSeqAIJCUSPARSERestoreArrayWrite()` 50565b7e41feSStefano Zampini @*/ 5057ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetArrayWrite(Mat A, PetscScalar** a) 5058ed502f03SStefano Zampini { 5059ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 5060ed502f03SStefano Zampini CsrMatrix *csr; 5061ed502f03SStefano Zampini 5062ed502f03SStefano Zampini PetscFunctionBegin; 5063ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 5064ed502f03SStefano Zampini PetscValidPointer(a,2); 5065ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 5066aed4548fSBarry Smith PetscCheck(cusp->format != MAT_CUSPARSE_ELL && cusp->format != MAT_CUSPARSE_HYB,PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 506728b400f6SJacob Faibussowitsch PetscCheck(cusp->mat,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 5068ed502f03SStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 506928b400f6SJacob Faibussowitsch PetscCheck(csr->values,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 5070ed502f03SStefano Zampini *a = csr->values->data().get(); 5071039c6fbaSStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 50729566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_FALSE)); 5073ed502f03SStefano Zampini PetscFunctionReturn(0); 5074ed502f03SStefano Zampini } 5075ed502f03SStefano Zampini 50765b7e41feSStefano Zampini /*@C 50775b7e41feSStefano Zampini MatSeqAIJCUSPARSERestoreArrayWrite - restore the write-only access array obtained from MatSeqAIJCUSPARSEGetArrayWrite() 50785b7e41feSStefano Zampini 50795b7e41feSStefano Zampini Not Collective 50805b7e41feSStefano Zampini 50815b7e41feSStefano Zampini Input Parameter: 50825b7e41feSStefano Zampini . A - a MATSEQAIJCUSPARSE matrix 50835b7e41feSStefano Zampini 50845b7e41feSStefano Zampini Output Parameter: 50855b7e41feSStefano Zampini . a - pointer to the device data 50865b7e41feSStefano Zampini 50875b7e41feSStefano Zampini Level: developer 50885b7e41feSStefano Zampini 5089db781477SPatrick Sanan .seealso: `MatSeqAIJCUSPARSEGetArrayWrite()` 50905b7e41feSStefano Zampini @*/ 5091ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreArrayWrite(Mat A, PetscScalar** a) 5092ed502f03SStefano Zampini { 5093ed502f03SStefano Zampini PetscFunctionBegin; 5094ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 5095ed502f03SStefano Zampini PetscValidPointer(a,2); 5096ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 50979566063dSJacob Faibussowitsch PetscCall(MatSeqAIJInvalidateDiagonal(A)); 50989566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)A)); 5099ed502f03SStefano Zampini *a = NULL; 5100ed502f03SStefano Zampini PetscFunctionReturn(0); 5101ed502f03SStefano Zampini } 5102ed502f03SStefano Zampini 5103ed502f03SStefano Zampini struct IJCompare4 5104ed502f03SStefano Zampini { 5105ed502f03SStefano Zampini __host__ __device__ 51062ed87e7eSStefano Zampini inline bool operator() (const thrust::tuple<int, int, PetscScalar, int> &t1, const thrust::tuple<int, int, PetscScalar, int> &t2) 5107ed502f03SStefano Zampini { 5108ed502f03SStefano Zampini if (t1.get<0>() < t2.get<0>()) return true; 5109ed502f03SStefano Zampini if (t1.get<0>() == t2.get<0>()) return t1.get<1>() < t2.get<1>(); 5110ed502f03SStefano Zampini return false; 5111ed502f03SStefano Zampini } 5112ed502f03SStefano Zampini }; 5113ed502f03SStefano Zampini 51148909a122SStefano Zampini struct Shift 51158909a122SStefano Zampini { 5116ed502f03SStefano Zampini int _shift; 5117ed502f03SStefano Zampini 5118ed502f03SStefano Zampini Shift(int shift) : _shift(shift) {} 5119ed502f03SStefano Zampini __host__ __device__ 5120ed502f03SStefano Zampini inline int operator() (const int &c) 5121ed502f03SStefano Zampini { 5122ed502f03SStefano Zampini return c + _shift; 5123ed502f03SStefano Zampini } 5124ed502f03SStefano Zampini }; 5125ed502f03SStefano Zampini 5126ddea5d60SJunchao Zhang /* merges two SeqAIJCUSPARSE matrices A, B by concatenating their rows. [A';B']' operation in matlab notation */ 5127ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEMergeMats(Mat A,Mat B,MatReuse reuse,Mat* C) 5128ed502f03SStefano Zampini { 5129ed502f03SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data, *b = (Mat_SeqAIJ*)B->data, *c; 5130ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr, *Bcusp = (Mat_SeqAIJCUSPARSE*)B->spptr, *Ccusp; 5131ed502f03SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Cmat; 5132ed502f03SStefano Zampini CsrMatrix *Acsr,*Bcsr,*Ccsr; 5133ed502f03SStefano Zampini PetscInt Annz,Bnnz; 5134ed502f03SStefano Zampini cusparseStatus_t stat; 5135ed502f03SStefano Zampini PetscInt i,m,n,zero = 0; 5136ed502f03SStefano Zampini 5137ed502f03SStefano Zampini PetscFunctionBegin; 5138ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 5139ed502f03SStefano Zampini PetscValidHeaderSpecific(B,MAT_CLASSID,2); 5140ed502f03SStefano Zampini PetscValidPointer(C,4); 5141ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 5142ed502f03SStefano Zampini PetscCheckTypeName(B,MATSEQAIJCUSPARSE); 51435f80ce2aSJacob Faibussowitsch PetscCheck(A->rmap->n == B->rmap->n,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Invalid number or rows %" PetscInt_FMT " != %" PetscInt_FMT,A->rmap->n,B->rmap->n); 514408401ef6SPierre Jolivet PetscCheck(reuse != MAT_INPLACE_MATRIX,PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_INPLACE_MATRIX not supported"); 5145aed4548fSBarry Smith PetscCheck(Acusp->format != MAT_CUSPARSE_ELL && Acusp->format != MAT_CUSPARSE_HYB,PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 5146aed4548fSBarry Smith PetscCheck(Bcusp->format != MAT_CUSPARSE_ELL && Bcusp->format != MAT_CUSPARSE_HYB,PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 5147ed502f03SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 5148ed502f03SStefano Zampini m = A->rmap->n; 5149ed502f03SStefano Zampini n = A->cmap->n + B->cmap->n; 51509566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF,C)); 51519566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*C,m,n,m,n)); 51529566063dSJacob Faibussowitsch PetscCall(MatSetType(*C,MATSEQAIJCUSPARSE)); 5153ed502f03SStefano Zampini c = (Mat_SeqAIJ*)(*C)->data; 5154ed502f03SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)(*C)->spptr; 5155ed502f03SStefano Zampini Cmat = new Mat_SeqAIJCUSPARSEMultStruct; 5156ed502f03SStefano Zampini Ccsr = new CsrMatrix; 5157ed502f03SStefano Zampini Cmat->cprowIndices = NULL; 5158ed502f03SStefano Zampini c->compressedrow.use = PETSC_FALSE; 5159ed502f03SStefano Zampini c->compressedrow.nrows = 0; 5160ed502f03SStefano Zampini c->compressedrow.i = NULL; 5161ed502f03SStefano Zampini c->compressedrow.rindex = NULL; 5162ed502f03SStefano Zampini Ccusp->workVector = NULL; 5163ed502f03SStefano Zampini Ccusp->nrows = m; 5164ed502f03SStefano Zampini Ccusp->mat = Cmat; 5165ed502f03SStefano Zampini Ccusp->mat->mat = Ccsr; 5166ed502f03SStefano Zampini Ccsr->num_rows = m; 5167ed502f03SStefano Zampini Ccsr->num_cols = n; 51689566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&Cmat->descr)); 51699566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(Cmat->descr, CUSPARSE_INDEX_BASE_ZERO)); 51709566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(Cmat->descr, CUSPARSE_MATRIX_TYPE_GENERAL)); 51719566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(Cmat->alpha_one),sizeof(PetscScalar))); 51729566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(Cmat->beta_zero),sizeof(PetscScalar))); 51739566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(Cmat->beta_one), sizeof(PetscScalar))); 51749566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(Cmat->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice)); 51759566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(Cmat->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice)); 51769566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(Cmat->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice)); 51779566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 51789566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(B)); 517928b400f6SJacob Faibussowitsch PetscCheck(Acusp->mat,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 518028b400f6SJacob Faibussowitsch PetscCheck(Bcusp->mat,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 5181ed502f03SStefano Zampini 5182ed502f03SStefano Zampini Acsr = (CsrMatrix*)Acusp->mat->mat; 5183ed502f03SStefano Zampini Bcsr = (CsrMatrix*)Bcusp->mat->mat; 5184ed502f03SStefano Zampini Annz = (PetscInt)Acsr->column_indices->size(); 5185ed502f03SStefano Zampini Bnnz = (PetscInt)Bcsr->column_indices->size(); 5186ed502f03SStefano Zampini c->nz = Annz + Bnnz; 5187ed502f03SStefano Zampini Ccsr->row_offsets = new THRUSTINTARRAY32(m+1); 5188ed502f03SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 5189ed502f03SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 5190ed502f03SStefano Zampini Ccsr->num_entries = c->nz; 5191ed502f03SStefano Zampini Ccusp->cooPerm = new THRUSTINTARRAY(c->nz); 5192ed502f03SStefano Zampini if (c->nz) { 51932ed87e7eSStefano Zampini auto Acoo = new THRUSTINTARRAY32(Annz); 51942ed87e7eSStefano Zampini auto Bcoo = new THRUSTINTARRAY32(Bnnz); 51952ed87e7eSStefano Zampini auto Ccoo = new THRUSTINTARRAY32(c->nz); 51962ed87e7eSStefano Zampini THRUSTINTARRAY32 *Aroff,*Broff; 51972ed87e7eSStefano Zampini 5198ed502f03SStefano Zampini if (a->compressedrow.use) { /* need full row offset */ 5199ed502f03SStefano Zampini if (!Acusp->rowoffsets_gpu) { 5200ed502f03SStefano Zampini Acusp->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n + 1); 5201ed502f03SStefano Zampini Acusp->rowoffsets_gpu->assign(a->i,a->i + A->rmap->n + 1); 52029566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu((A->rmap->n + 1)*sizeof(PetscInt))); 5203ed502f03SStefano Zampini } 52042ed87e7eSStefano Zampini Aroff = Acusp->rowoffsets_gpu; 52052ed87e7eSStefano Zampini } else Aroff = Acsr->row_offsets; 5206ed502f03SStefano Zampini if (b->compressedrow.use) { /* need full row offset */ 5207ed502f03SStefano Zampini if (!Bcusp->rowoffsets_gpu) { 5208ed502f03SStefano Zampini Bcusp->rowoffsets_gpu = new THRUSTINTARRAY32(B->rmap->n + 1); 5209ed502f03SStefano Zampini Bcusp->rowoffsets_gpu->assign(b->i,b->i + B->rmap->n + 1); 52109566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu((B->rmap->n + 1)*sizeof(PetscInt))); 5211ed502f03SStefano Zampini } 52122ed87e7eSStefano Zampini Broff = Bcusp->rowoffsets_gpu; 52132ed87e7eSStefano Zampini } else Broff = Bcsr->row_offsets; 52149566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 52152ed87e7eSStefano Zampini stat = cusparseXcsr2coo(Acusp->handle, 52162ed87e7eSStefano Zampini Aroff->data().get(), 52172ed87e7eSStefano Zampini Annz, 52182ed87e7eSStefano Zampini m, 52192ed87e7eSStefano Zampini Acoo->data().get(), 52209566063dSJacob Faibussowitsch CUSPARSE_INDEX_BASE_ZERO);PetscCallCUSPARSE(stat); 5221ed502f03SStefano Zampini stat = cusparseXcsr2coo(Bcusp->handle, 52222ed87e7eSStefano Zampini Broff->data().get(), 5223ed502f03SStefano Zampini Bnnz, 5224ed502f03SStefano Zampini m, 52252ed87e7eSStefano Zampini Bcoo->data().get(), 52269566063dSJacob Faibussowitsch CUSPARSE_INDEX_BASE_ZERO);PetscCallCUSPARSE(stat); 52272ed87e7eSStefano Zampini /* Issues when using bool with large matrices on SUMMIT 10.2.89 */ 52282ed87e7eSStefano Zampini auto Aperm = thrust::make_constant_iterator(1); 52292ed87e7eSStefano Zampini auto Bperm = thrust::make_constant_iterator(0); 52308909a122SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(10,0,0) 5231ed502f03SStefano Zampini auto Bcib = thrust::make_transform_iterator(Bcsr->column_indices->begin(),Shift(A->cmap->n)); 5232ed502f03SStefano Zampini auto Bcie = thrust::make_transform_iterator(Bcsr->column_indices->end(),Shift(A->cmap->n)); 52338909a122SStefano Zampini #else 52348909a122SStefano Zampini /* there are issues instantiating the merge operation using a transform iterator for the columns of B */ 52358909a122SStefano Zampini auto Bcib = Bcsr->column_indices->begin(); 52368909a122SStefano Zampini auto Bcie = Bcsr->column_indices->end(); 52378909a122SStefano Zampini thrust::transform(Bcib,Bcie,Bcib,Shift(A->cmap->n)); 52388909a122SStefano Zampini #endif 52392ed87e7eSStefano Zampini auto wPerm = new THRUSTINTARRAY32(Annz+Bnnz); 52402ed87e7eSStefano Zampini auto Azb = thrust::make_zip_iterator(thrust::make_tuple(Acoo->begin(),Acsr->column_indices->begin(),Acsr->values->begin(),Aperm)); 52412ed87e7eSStefano Zampini auto Aze = thrust::make_zip_iterator(thrust::make_tuple(Acoo->end(),Acsr->column_indices->end(),Acsr->values->end(),Aperm)); 52422ed87e7eSStefano Zampini auto Bzb = thrust::make_zip_iterator(thrust::make_tuple(Bcoo->begin(),Bcib,Bcsr->values->begin(),Bperm)); 52432ed87e7eSStefano Zampini auto Bze = thrust::make_zip_iterator(thrust::make_tuple(Bcoo->end(),Bcie,Bcsr->values->end(),Bperm)); 52442ed87e7eSStefano Zampini auto Czb = thrust::make_zip_iterator(thrust::make_tuple(Ccoo->begin(),Ccsr->column_indices->begin(),Ccsr->values->begin(),wPerm->begin())); 5245ed502f03SStefano Zampini auto p1 = Ccusp->cooPerm->begin(); 5246ed502f03SStefano Zampini auto p2 = Ccusp->cooPerm->begin(); 5247ed502f03SStefano Zampini thrust::advance(p2,Annz); 52482ed87e7eSStefano Zampini PetscStackCallThrust(thrust::merge(thrust::device,Azb,Aze,Bzb,Bze,Czb,IJCompare4())); 52498909a122SStefano Zampini #if PETSC_PKG_CUDA_VERSION_LT(10,0,0) 52508909a122SStefano Zampini thrust::transform(Bcib,Bcie,Bcib,Shift(-A->cmap->n)); 52518909a122SStefano Zampini #endif 52522ed87e7eSStefano Zampini auto cci = thrust::make_counting_iterator(zero); 52532ed87e7eSStefano Zampini auto cce = thrust::make_counting_iterator(c->nz); 52542ed87e7eSStefano Zampini #if 0 //Errors on SUMMIT cuda 11.1.0 52552ed87e7eSStefano Zampini PetscStackCallThrust(thrust::partition_copy(thrust::device,cci,cce,wPerm->begin(),p1,p2,thrust::identity<int>())); 52562ed87e7eSStefano Zampini #else 52572ed87e7eSStefano Zampini auto pred = thrust::identity<int>(); 52582ed87e7eSStefano Zampini PetscStackCallThrust(thrust::copy_if(thrust::device,cci,cce,wPerm->begin(),p1,pred)); 52592ed87e7eSStefano Zampini PetscStackCallThrust(thrust::remove_copy_if(thrust::device,cci,cce,wPerm->begin(),p2,pred)); 52602ed87e7eSStefano Zampini #endif 5261ed502f03SStefano Zampini stat = cusparseXcoo2csr(Ccusp->handle, 52622ed87e7eSStefano Zampini Ccoo->data().get(), 5263ed502f03SStefano Zampini c->nz, 5264ed502f03SStefano Zampini m, 5265ed502f03SStefano Zampini Ccsr->row_offsets->data().get(), 52669566063dSJacob Faibussowitsch CUSPARSE_INDEX_BASE_ZERO);PetscCallCUSPARSE(stat); 52679566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 52682ed87e7eSStefano Zampini delete wPerm; 52692ed87e7eSStefano Zampini delete Acoo; 52702ed87e7eSStefano Zampini delete Bcoo; 52712ed87e7eSStefano Zampini delete Ccoo; 5272ed502f03SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 5273ed502f03SStefano Zampini stat = cusparseCreateCsr(&Cmat->matDescr, Ccsr->num_rows, Ccsr->num_cols, Ccsr->num_entries, 5274ed502f03SStefano Zampini Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get(), Ccsr->values->data().get(), 5275ed502f03SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 52769566063dSJacob Faibussowitsch CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);PetscCallCUSPARSE(stat); 5277ed502f03SStefano Zampini #endif 52781a2c6b5cSJunchao Zhang if (A->form_explicit_transpose && B->form_explicit_transpose) { /* if A and B have the transpose, generate C transpose too */ 52799566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEFormExplicitTranspose(A)); 52809566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEFormExplicitTranspose(B)); 5281ed502f03SStefano Zampini PetscBool AT = Acusp->matTranspose ? PETSC_TRUE : PETSC_FALSE, BT = Bcusp->matTranspose ? PETSC_TRUE : PETSC_FALSE; 5282ed502f03SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *CmatT = new Mat_SeqAIJCUSPARSEMultStruct; 5283ed502f03SStefano Zampini CsrMatrix *CcsrT = new CsrMatrix; 5284ed502f03SStefano Zampini CsrMatrix *AcsrT = AT ? (CsrMatrix*)Acusp->matTranspose->mat : NULL; 5285ed502f03SStefano Zampini CsrMatrix *BcsrT = BT ? (CsrMatrix*)Bcusp->matTranspose->mat : NULL; 5286ed502f03SStefano Zampini 52871a2c6b5cSJunchao Zhang (*C)->form_explicit_transpose = PETSC_TRUE; 52881a2c6b5cSJunchao Zhang (*C)->transupdated = PETSC_TRUE; 5289a49f1ed0SStefano Zampini Ccusp->rowoffsets_gpu = NULL; 5290ed502f03SStefano Zampini CmatT->cprowIndices = NULL; 5291ed502f03SStefano Zampini CmatT->mat = CcsrT; 5292ed502f03SStefano Zampini CcsrT->num_rows = n; 5293ed502f03SStefano Zampini CcsrT->num_cols = m; 5294ed502f03SStefano Zampini CcsrT->num_entries = c->nz; 5295ed502f03SStefano Zampini 5296ed502f03SStefano Zampini CcsrT->row_offsets = new THRUSTINTARRAY32(n+1); 5297ed502f03SStefano Zampini CcsrT->column_indices = new THRUSTINTARRAY32(c->nz); 5298ed502f03SStefano Zampini CcsrT->values = new THRUSTARRAY(c->nz); 5299ed502f03SStefano Zampini 53009566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 5301ed502f03SStefano Zampini auto rT = CcsrT->row_offsets->begin(); 5302ed502f03SStefano Zampini if (AT) { 5303ed502f03SStefano Zampini rT = thrust::copy(AcsrT->row_offsets->begin(),AcsrT->row_offsets->end(),rT); 5304ed502f03SStefano Zampini thrust::advance(rT,-1); 5305ed502f03SStefano Zampini } 5306ed502f03SStefano Zampini if (BT) { 5307ed502f03SStefano Zampini auto titb = thrust::make_transform_iterator(BcsrT->row_offsets->begin(),Shift(a->nz)); 5308ed502f03SStefano Zampini auto tite = thrust::make_transform_iterator(BcsrT->row_offsets->end(),Shift(a->nz)); 5309ed502f03SStefano Zampini thrust::copy(titb,tite,rT); 5310ed502f03SStefano Zampini } 5311ed502f03SStefano Zampini auto cT = CcsrT->column_indices->begin(); 5312ed502f03SStefano Zampini if (AT) cT = thrust::copy(AcsrT->column_indices->begin(),AcsrT->column_indices->end(),cT); 5313ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->column_indices->begin(),BcsrT->column_indices->end(),cT); 5314ed502f03SStefano Zampini auto vT = CcsrT->values->begin(); 5315ed502f03SStefano Zampini if (AT) vT = thrust::copy(AcsrT->values->begin(),AcsrT->values->end(),vT); 5316ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->values->begin(),BcsrT->values->end(),vT); 53179566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 5318ed502f03SStefano Zampini 53199566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&CmatT->descr)); 53209566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(CmatT->descr, CUSPARSE_INDEX_BASE_ZERO)); 53219566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(CmatT->descr, CUSPARSE_MATRIX_TYPE_GENERAL)); 53229566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(CmatT->alpha_one),sizeof(PetscScalar))); 53239566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(CmatT->beta_zero),sizeof(PetscScalar))); 53249566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(CmatT->beta_one), sizeof(PetscScalar))); 53259566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(CmatT->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice)); 53269566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(CmatT->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice)); 53279566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(CmatT->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice)); 5328ed502f03SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 5329ed502f03SStefano Zampini stat = cusparseCreateCsr(&CmatT->matDescr, CcsrT->num_rows, CcsrT->num_cols, CcsrT->num_entries, 5330ed502f03SStefano Zampini CcsrT->row_offsets->data().get(), CcsrT->column_indices->data().get(), CcsrT->values->data().get(), 5331ed502f03SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 53329566063dSJacob Faibussowitsch CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);PetscCallCUSPARSE(stat); 5333ed502f03SStefano Zampini #endif 5334ed502f03SStefano Zampini Ccusp->matTranspose = CmatT; 5335ed502f03SStefano Zampini } 5336ed502f03SStefano Zampini } 5337ed502f03SStefano Zampini 5338ed502f03SStefano Zampini c->singlemalloc = PETSC_FALSE; 5339ed502f03SStefano Zampini c->free_a = PETSC_TRUE; 5340ed502f03SStefano Zampini c->free_ij = PETSC_TRUE; 53419566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m+1,&c->i)); 53429566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(c->nz,&c->j)); 5343ed502f03SStefano Zampini if (PetscDefined(USE_64BIT_INDICES)) { /* 32 to 64 bit conversion on the GPU and then copy to host (lazy) */ 5344ed502f03SStefano Zampini THRUSTINTARRAY ii(Ccsr->row_offsets->size()); 5345ed502f03SStefano Zampini THRUSTINTARRAY jj(Ccsr->column_indices->size()); 5346ed502f03SStefano Zampini ii = *Ccsr->row_offsets; 5347ed502f03SStefano Zampini jj = *Ccsr->column_indices; 53489566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(c->i,ii.data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost)); 53499566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(c->j,jj.data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost)); 5350ed502f03SStefano Zampini } else { 53519566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(c->i,Ccsr->row_offsets->data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost)); 53529566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(c->j,Ccsr->column_indices->data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost)); 5353ed502f03SStefano Zampini } 53549566063dSJacob Faibussowitsch PetscCall(PetscLogGpuToCpu((Ccsr->column_indices->size() + Ccsr->row_offsets->size())*sizeof(PetscInt))); 53559566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m,&c->ilen)); 53569566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m,&c->imax)); 5357ed502f03SStefano Zampini c->maxnz = c->nz; 5358ed502f03SStefano Zampini c->nonzerorowcnt = 0; 5359ed502f03SStefano Zampini c->rmax = 0; 5360ed502f03SStefano Zampini for (i = 0; i < m; i++) { 5361ed502f03SStefano Zampini const PetscInt nn = c->i[i+1] - c->i[i]; 5362ed502f03SStefano Zampini c->ilen[i] = c->imax[i] = nn; 5363ed502f03SStefano Zampini c->nonzerorowcnt += (PetscInt)!!nn; 5364ed502f03SStefano Zampini c->rmax = PetscMax(c->rmax,nn); 5365ed502f03SStefano Zampini } 53669566063dSJacob Faibussowitsch PetscCall(MatMarkDiagonal_SeqAIJ(*C)); 53679566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(c->nz,&c->a)); 5368ed502f03SStefano Zampini (*C)->nonzerostate++; 53699566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp((*C)->rmap)); 53709566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp((*C)->cmap)); 5371ed502f03SStefano Zampini Ccusp->nonzerostate = (*C)->nonzerostate; 5372ed502f03SStefano Zampini (*C)->preallocated = PETSC_TRUE; 5373ed502f03SStefano Zampini } else { 537408401ef6SPierre Jolivet PetscCheck((*C)->rmap->n == B->rmap->n,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Invalid number or rows %" PetscInt_FMT " != %" PetscInt_FMT,(*C)->rmap->n,B->rmap->n); 5375ed502f03SStefano Zampini c = (Mat_SeqAIJ*)(*C)->data; 5376ed502f03SStefano Zampini if (c->nz) { 5377ed502f03SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)(*C)->spptr; 53785f80ce2aSJacob Faibussowitsch PetscCheck(Ccusp->cooPerm,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cooPerm"); 5379aed4548fSBarry Smith PetscCheck(Ccusp->format != MAT_CUSPARSE_ELL && Ccusp->format != MAT_CUSPARSE_HYB,PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 538008401ef6SPierre Jolivet PetscCheck(Ccusp->nonzerostate == (*C)->nonzerostate,PETSC_COMM_SELF,PETSC_ERR_COR,"Wrong nonzerostate"); 53819566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 53829566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(B)); 53835f80ce2aSJacob Faibussowitsch PetscCheck(Acusp->mat,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 53845f80ce2aSJacob Faibussowitsch PetscCheck(Bcusp->mat,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 5385ed502f03SStefano Zampini Acsr = (CsrMatrix*)Acusp->mat->mat; 5386ed502f03SStefano Zampini Bcsr = (CsrMatrix*)Bcusp->mat->mat; 5387ed502f03SStefano Zampini Ccsr = (CsrMatrix*)Ccusp->mat->mat; 5388aed4548fSBarry Smith PetscCheck(Acsr->num_entries == (PetscInt)Acsr->values->size(),PETSC_COMM_SELF,PETSC_ERR_COR,"A nnz %" PetscInt_FMT " != %" PetscInt_FMT,Acsr->num_entries,(PetscInt)Acsr->values->size()); 5389aed4548fSBarry Smith PetscCheck(Bcsr->num_entries == (PetscInt)Bcsr->values->size(),PETSC_COMM_SELF,PETSC_ERR_COR,"B nnz %" PetscInt_FMT " != %" PetscInt_FMT,Bcsr->num_entries,(PetscInt)Bcsr->values->size()); 5390aed4548fSBarry Smith PetscCheck(Ccsr->num_entries == (PetscInt)Ccsr->values->size(),PETSC_COMM_SELF,PETSC_ERR_COR,"C nnz %" PetscInt_FMT " != %" PetscInt_FMT,Ccsr->num_entries,(PetscInt)Ccsr->values->size()); 5391aed4548fSBarry Smith PetscCheck(Ccsr->num_entries == Acsr->num_entries + Bcsr->num_entries,PETSC_COMM_SELF,PETSC_ERR_COR,"C nnz %" PetscInt_FMT " != %" PetscInt_FMT " + %" PetscInt_FMT,Ccsr->num_entries,Acsr->num_entries,Bcsr->num_entries); 53925f80ce2aSJacob Faibussowitsch PetscCheck(Ccusp->cooPerm->size() == Ccsr->values->size(),PETSC_COMM_SELF,PETSC_ERR_COR,"permSize %" PetscInt_FMT " != %" PetscInt_FMT,(PetscInt)Ccusp->cooPerm->size(),(PetscInt)Ccsr->values->size()); 5393ed502f03SStefano Zampini auto pmid = Ccusp->cooPerm->begin(); 5394ed502f03SStefano Zampini thrust::advance(pmid,Acsr->num_entries); 53959566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 5396ed502f03SStefano Zampini auto zibait = thrust::make_zip_iterator(thrust::make_tuple(Acsr->values->begin(), 5397ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),Ccusp->cooPerm->begin()))); 5398ed502f03SStefano Zampini auto zieait = thrust::make_zip_iterator(thrust::make_tuple(Acsr->values->end(), 5399ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),pmid))); 5400ed502f03SStefano Zampini thrust::for_each(zibait,zieait,VecCUDAEquals()); 5401ed502f03SStefano Zampini auto zibbit = thrust::make_zip_iterator(thrust::make_tuple(Bcsr->values->begin(), 5402ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),pmid))); 5403ed502f03SStefano Zampini auto ziebit = thrust::make_zip_iterator(thrust::make_tuple(Bcsr->values->end(), 5404ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),Ccusp->cooPerm->end()))); 5405ed502f03SStefano Zampini thrust::for_each(zibbit,ziebit,VecCUDAEquals()); 54069566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(*C,PETSC_FALSE)); 54071a2c6b5cSJunchao Zhang if (A->form_explicit_transpose && B->form_explicit_transpose && (*C)->form_explicit_transpose) { 54085f80ce2aSJacob Faibussowitsch PetscCheck(Ccusp->matTranspose,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing transpose Mat_SeqAIJCUSPARSEMultStruct"); 5409ed502f03SStefano Zampini PetscBool AT = Acusp->matTranspose ? PETSC_TRUE : PETSC_FALSE, BT = Bcusp->matTranspose ? PETSC_TRUE : PETSC_FALSE; 5410ed502f03SStefano Zampini CsrMatrix *AcsrT = AT ? (CsrMatrix*)Acusp->matTranspose->mat : NULL; 5411ed502f03SStefano Zampini CsrMatrix *BcsrT = BT ? (CsrMatrix*)Bcusp->matTranspose->mat : NULL; 5412ed502f03SStefano Zampini CsrMatrix *CcsrT = (CsrMatrix*)Ccusp->matTranspose->mat; 5413ed502f03SStefano Zampini auto vT = CcsrT->values->begin(); 5414ed502f03SStefano Zampini if (AT) vT = thrust::copy(AcsrT->values->begin(),AcsrT->values->end(),vT); 5415ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->values->begin(),BcsrT->values->end(),vT); 54161a2c6b5cSJunchao Zhang (*C)->transupdated = PETSC_TRUE; 5417ed502f03SStefano Zampini } 54189566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 5419ed502f03SStefano Zampini } 5420ed502f03SStefano Zampini } 54219566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)*C)); 5422ed502f03SStefano Zampini (*C)->assembled = PETSC_TRUE; 5423ed502f03SStefano Zampini (*C)->was_assembled = PETSC_FALSE; 5424ed502f03SStefano Zampini (*C)->offloadmask = PETSC_OFFLOAD_GPU; 5425ed502f03SStefano Zampini PetscFunctionReturn(0); 5426ed502f03SStefano Zampini } 5427c215019aSStefano Zampini 5428c215019aSStefano Zampini static PetscErrorCode MatSeqAIJCopySubArray_SeqAIJCUSPARSE(Mat A, PetscInt n, const PetscInt idx[], PetscScalar v[]) 5429c215019aSStefano Zampini { 5430c215019aSStefano Zampini bool dmem; 5431c215019aSStefano Zampini const PetscScalar *av; 5432c215019aSStefano Zampini 5433c215019aSStefano Zampini PetscFunctionBegin; 5434c215019aSStefano Zampini dmem = isCudaMem(v); 54359566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEGetArrayRead(A,&av)); 5436c215019aSStefano Zampini if (n && idx) { 5437c215019aSStefano Zampini THRUSTINTARRAY widx(n); 5438c215019aSStefano Zampini widx.assign(idx,idx+n); 54399566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(n*sizeof(PetscInt))); 5440c215019aSStefano Zampini 5441c215019aSStefano Zampini THRUSTARRAY *w = NULL; 5442c215019aSStefano Zampini thrust::device_ptr<PetscScalar> dv; 5443c215019aSStefano Zampini if (dmem) { 5444c215019aSStefano Zampini dv = thrust::device_pointer_cast(v); 5445c215019aSStefano Zampini } else { 5446c215019aSStefano Zampini w = new THRUSTARRAY(n); 5447c215019aSStefano Zampini dv = w->data(); 5448c215019aSStefano Zampini } 5449c215019aSStefano Zampini thrust::device_ptr<const PetscScalar> dav = thrust::device_pointer_cast(av); 5450c215019aSStefano Zampini 5451c215019aSStefano Zampini auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(dav,widx.begin()),dv)); 5452c215019aSStefano Zampini auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(dav,widx.end()),dv+n)); 5453c215019aSStefano Zampini thrust::for_each(zibit,zieit,VecCUDAEquals()); 5454c215019aSStefano Zampini if (w) { 54559566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(v,w->data().get(),n*sizeof(PetscScalar),cudaMemcpyDeviceToHost)); 5456c215019aSStefano Zampini } 5457c215019aSStefano Zampini delete w; 5458c215019aSStefano Zampini } else { 54599566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(v,av,n*sizeof(PetscScalar),dmem ? cudaMemcpyDeviceToDevice : cudaMemcpyDeviceToHost)); 5460c215019aSStefano Zampini } 54619566063dSJacob Faibussowitsch if (!dmem) PetscCall(PetscLogCpuToGpu(n*sizeof(PetscScalar))); 54629566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSERestoreArrayRead(A,&av)); 5463c215019aSStefano Zampini PetscFunctionReturn(0); 5464c215019aSStefano Zampini } 5465