19ae82921SPaul Mullowney /* 29ae82921SPaul Mullowney Defines the basic matrix operations for the AIJ (compressed row) 3fd7c363cSSatish Balay matrix storage format using the CUSPARSE library, 49ae82921SPaul Mullowney */ 599acd6aaSStefano Zampini #define PETSC_SKIP_IMMINTRIN_H_CUDAWORKAROUND 1 69ae82921SPaul Mullowney 73d13b8fdSMatthew G. Knepley #include <petscconf.h> 83d13b8fdSMatthew G. Knepley #include <../src/mat/impls/aij/seq/aij.h> /*I "petscmat.h" I*/ 9087f3262SPaul Mullowney #include <../src/mat/impls/sbaij/seq/sbaij.h> 103d13b8fdSMatthew G. Knepley #include <../src/vec/vec/impls/dvecimpl.h> 11af0996ceSBarry Smith #include <petsc/private/vecimpl.h> 129ae82921SPaul Mullowney #undef VecType 133d13b8fdSMatthew G. Knepley #include <../src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h> 14a2cee5feSJed Brown #include <thrust/adjacent_difference.h> 15d0967f54SJacob Faibussowitsch #if PETSC_CPP_VERSION >= 14 16d0967f54SJacob Faibussowitsch #define PETSC_HAVE_THRUST_ASYNC 1 17d0967f54SJacob Faibussowitsch // thrust::for_each(thrust::cuda::par.on()) requires C++14 18a0e72f99SJunchao Zhang #include <thrust/async/for_each.h> 19d0967f54SJacob Faibussowitsch #endif 20a2cee5feSJed Brown #include <thrust/iterator/constant_iterator.h> 21a2cee5feSJed Brown #include <thrust/remove.h> 22a2cee5feSJed Brown #include <thrust/sort.h> 23a2cee5feSJed Brown #include <thrust/unique.h> 24e8d2b73aSMark Adams 25e057df02SPaul Mullowney const char *const MatCUSPARSEStorageFormats[] = {"CSR", "ELL", "HYB", "MatCUSPARSEStorageFormat", "MAT_CUSPARSE_", 0}; 26afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 27afb2bd1cSJunchao Zhang /* The following are copied from cusparse.h in CUDA-11.0. In MatCUSPARSESpMVAlgorithms[] etc, we copy them in 28afb2bd1cSJunchao Zhang 0-based integer value order, since we want to use PetscOptionsEnum() to parse user command line options for them. 29afb2bd1cSJunchao Zhang 30afb2bd1cSJunchao Zhang typedef enum { 31afb2bd1cSJunchao Zhang CUSPARSE_MV_ALG_DEFAULT = 0, 32afb2bd1cSJunchao Zhang CUSPARSE_COOMV_ALG = 1, 33afb2bd1cSJunchao Zhang CUSPARSE_CSRMV_ALG1 = 2, 34afb2bd1cSJunchao Zhang CUSPARSE_CSRMV_ALG2 = 3 35afb2bd1cSJunchao Zhang } cusparseSpMVAlg_t; 36afb2bd1cSJunchao Zhang 37afb2bd1cSJunchao Zhang typedef enum { 38afb2bd1cSJunchao Zhang CUSPARSE_MM_ALG_DEFAULT CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_ALG_DEFAULT) = 0, 39afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG1 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG1) = 1, 40afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG2 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG2) = 2, 41afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG3 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG3) = 3, 42afb2bd1cSJunchao Zhang CUSPARSE_CSRMM_ALG1 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_CSR_ALG1) = 4, 43afb2bd1cSJunchao Zhang CUSPARSE_SPMM_ALG_DEFAULT = 0, 44afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG1 = 1, 45afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG2 = 2, 46afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG3 = 3, 47afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG4 = 5, 48afb2bd1cSJunchao Zhang CUSPARSE_SPMM_CSR_ALG1 = 4, 49afb2bd1cSJunchao Zhang CUSPARSE_SPMM_CSR_ALG2 = 6, 50afb2bd1cSJunchao Zhang } cusparseSpMMAlg_t; 51afb2bd1cSJunchao Zhang 52afb2bd1cSJunchao Zhang typedef enum { 5335cb6cd3SPierre Jolivet CUSPARSE_CSR2CSC_ALG1 = 1, // faster than V2 (in general), deterministic 5435cb6cd3SPierre Jolivet CUSPARSE_CSR2CSC_ALG2 = 2 // low memory requirement, non-deterministic 55afb2bd1cSJunchao Zhang } cusparseCsr2CscAlg_t; 56afb2bd1cSJunchao Zhang */ 57afb2bd1cSJunchao Zhang const char *const MatCUSPARSESpMVAlgorithms[] = {"MV_ALG_DEFAULT", "COOMV_ALG", "CSRMV_ALG1", "CSRMV_ALG2", "cusparseSpMVAlg_t", "CUSPARSE_", 0}; 58afb2bd1cSJunchao Zhang const char *const MatCUSPARSESpMMAlgorithms[] = {"ALG_DEFAULT", "COO_ALG1", "COO_ALG2", "COO_ALG3", "CSR_ALG1", "COO_ALG4", "CSR_ALG2", "cusparseSpMMAlg_t", "CUSPARSE_SPMM_", 0}; 59afb2bd1cSJunchao Zhang const char *const MatCUSPARSECsr2CscAlgorithms[] = {"INVALID" /*cusparse does not have enum 0! We created one*/, "ALG1", "ALG2", "cusparseCsr2CscAlg_t", "CUSPARSE_CSR2CSC_", 0}; 60afb2bd1cSJunchao Zhang #endif 619ae82921SPaul Mullowney 62087f3262SPaul Mullowney static PetscErrorCode MatICCFactorSymbolic_SeqAIJCUSPARSE(Mat, Mat, IS, const MatFactorInfo *); 63087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorSymbolic_SeqAIJCUSPARSE(Mat, Mat, IS, const MatFactorInfo *); 64087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorNumeric_SeqAIJCUSPARSE(Mat, Mat, const MatFactorInfo *); 65087f3262SPaul Mullowney 666fa9248bSJed Brown static PetscErrorCode MatILUFactorSymbolic_SeqAIJCUSPARSE(Mat, Mat, IS, IS, const MatFactorInfo *); 676fa9248bSJed Brown static PetscErrorCode MatLUFactorSymbolic_SeqAIJCUSPARSE(Mat, Mat, IS, IS, const MatFactorInfo *); 686fa9248bSJed Brown static PetscErrorCode MatLUFactorNumeric_SeqAIJCUSPARSE(Mat, Mat, const MatFactorInfo *); 69087f3262SPaul Mullowney 706fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE(Mat, Vec, Vec); 716fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE_NaturalOrdering(Mat, Vec, Vec); 726fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE(Mat, Vec, Vec); 736fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering(Mat, Vec, Vec); 74dbbe0bcdSBarry Smith static PetscErrorCode MatSetFromOptions_SeqAIJCUSPARSE(Mat, PetscOptionItems *PetscOptionsObject); 75a587d139SMark static PetscErrorCode MatAXPY_SeqAIJCUSPARSE(Mat, PetscScalar, Mat, MatStructure); 7633c9ba73SStefano Zampini static PetscErrorCode MatScale_SeqAIJCUSPARSE(Mat, PetscScalar); 776fa9248bSJed Brown static PetscErrorCode MatMult_SeqAIJCUSPARSE(Mat, Vec, Vec); 786fa9248bSJed Brown static PetscErrorCode MatMultAdd_SeqAIJCUSPARSE(Mat, Vec, Vec, Vec); 796fa9248bSJed Brown static PetscErrorCode MatMultTranspose_SeqAIJCUSPARSE(Mat, Vec, Vec); 806fa9248bSJed Brown static PetscErrorCode MatMultTransposeAdd_SeqAIJCUSPARSE(Mat, Vec, Vec, Vec); 81e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTranspose_SeqAIJCUSPARSE(Mat, Vec, Vec); 82e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTransposeAdd_SeqAIJCUSPARSE(Mat, Vec, Vec, Vec); 83e6e9a74fSStefano Zampini static PetscErrorCode MatMultAddKernel_SeqAIJCUSPARSE(Mat, Vec, Vec, Vec, PetscBool, PetscBool); 849ae82921SPaul Mullowney 857f756511SDominic Meiser static PetscErrorCode CsrMatrix_Destroy(CsrMatrix **); 86470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSETriFactorStruct **); 87470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSEMultStruct **, MatCUSPARSEStorageFormat); 88470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSETriFactors_Destroy(Mat_SeqAIJCUSPARSETriFactors **); 89470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSE_Destroy(Mat_SeqAIJCUSPARSE **); 907f756511SDominic Meiser 9157181aedSStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSECopyFromGPU(Mat); 92a49f1ed0SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSEInvalidateTranspose(Mat, PetscBool); 9357181aedSStefano Zampini 94c215019aSStefano Zampini static PetscErrorCode MatSeqAIJCopySubArray_SeqAIJCUSPARSE(Mat, PetscInt, const PetscInt[], PetscScalar[]); 95e8729f6fSJunchao Zhang static PetscErrorCode MatSetPreallocationCOO_SeqAIJCUSPARSE(Mat, PetscCount, PetscInt[], PetscInt[]); 96219fbbafSJunchao Zhang static PetscErrorCode MatSetValuesCOO_SeqAIJCUSPARSE(Mat, const PetscScalar[], InsertMode); 97c215019aSStefano Zampini 98d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatCUSPARSESetFormat_SeqAIJCUSPARSE(Mat A, MatCUSPARSEFormatOperation op, MatCUSPARSEStorageFormat format) 99d71ae5a4SJacob Faibussowitsch { 100aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE *)A->spptr; 1016e111a19SKarl Rupp 102ca45077fSPaul Mullowney PetscFunctionBegin; 103ca45077fSPaul Mullowney switch (op) { 104d71ae5a4SJacob Faibussowitsch case MAT_CUSPARSE_MULT: 105d71ae5a4SJacob Faibussowitsch cusparsestruct->format = format; 106d71ae5a4SJacob Faibussowitsch break; 107d71ae5a4SJacob Faibussowitsch case MAT_CUSPARSE_ALL: 108d71ae5a4SJacob Faibussowitsch cusparsestruct->format = format; 109d71ae5a4SJacob Faibussowitsch break; 110d71ae5a4SJacob Faibussowitsch default: 111d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "unsupported operation %d for MatCUSPARSEFormatOperation. MAT_CUSPARSE_MULT and MAT_CUSPARSE_ALL are currently supported.", op); 112ca45077fSPaul Mullowney } 1133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 114ca45077fSPaul Mullowney } 1159ae82921SPaul Mullowney 116e057df02SPaul Mullowney /*@ 11711a5261eSBarry Smith MatCUSPARSESetFormat - Sets the storage format of `MATSEQCUSPARSE` matrices for a particular 11811a5261eSBarry Smith operation. Only the `MatMult()` operation can use different GPU storage formats 11911a5261eSBarry Smith 120e057df02SPaul Mullowney Not Collective 121e057df02SPaul Mullowney 122e057df02SPaul Mullowney Input Parameters: 12311a5261eSBarry Smith + A - Matrix of type `MATSEQAIJCUSPARSE` 1242ef1f0ffSBarry Smith . op - `MatCUSPARSEFormatOperation`. `MATSEQAIJCUSPARSE` matrices support `MAT_CUSPARSE_MULT` and `MAT_CUSPARSE_ALL`. 1252ef1f0ffSBarry Smith `MATMPIAIJCUSPARSE` matrices support `MAT_CUSPARSE_MULT_DIAG`,`MAT_CUSPARSE_MULT_OFFDIAG`, and `MAT_CUSPARSE_ALL`. 12611a5261eSBarry Smith - format - `MatCUSPARSEStorageFormat` (one of `MAT_CUSPARSE_CSR`, `MAT_CUSPARSE_ELL`, `MAT_CUSPARSE_HYB`.) 127e057df02SPaul Mullowney 128e057df02SPaul Mullowney Level: intermediate 129e057df02SPaul Mullowney 1302ef1f0ffSBarry Smith .seealso: [](chapter_matrices), `Mat`, `Mat`, `MATSEQAIJCUSPARSE`, `MatCUSPARSEStorageFormat`, `MatCUSPARSEFormatOperation` 131e057df02SPaul Mullowney @*/ 132d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCUSPARSESetFormat(Mat A, MatCUSPARSEFormatOperation op, MatCUSPARSEStorageFormat format) 133d71ae5a4SJacob Faibussowitsch { 134e057df02SPaul Mullowney PetscFunctionBegin; 135e057df02SPaul Mullowney PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 136cac4c232SBarry Smith PetscTryMethod(A, "MatCUSPARSESetFormat_C", (Mat, MatCUSPARSEFormatOperation, MatCUSPARSEStorageFormat), (A, op, format)); 1373ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 138e057df02SPaul Mullowney } 139e057df02SPaul Mullowney 140d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatCUSPARSESetUseCPUSolve_SeqAIJCUSPARSE(Mat A, PetscBool use_cpu) 141d71ae5a4SJacob Faibussowitsch { 142365b711fSMark Adams Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE *)A->spptr; 143365b711fSMark Adams 144365b711fSMark Adams PetscFunctionBegin; 145365b711fSMark Adams cusparsestruct->use_cpu_solve = use_cpu; 1463ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 147365b711fSMark Adams } 148365b711fSMark Adams 149365b711fSMark Adams /*@ 15011a5261eSBarry Smith MatCUSPARSESetUseCPUSolve - Sets to use CPU `MatSolve()`. 151365b711fSMark Adams 152365b711fSMark Adams Input Parameters: 15311a5261eSBarry Smith + A - Matrix of type `MATSEQAIJCUSPARSE` 15411a5261eSBarry Smith - use_cpu - set flag for using the built-in CPU `MatSolve()` 155365b711fSMark Adams 1562ef1f0ffSBarry Smith Level: intermediate 157365b711fSMark Adams 15811a5261eSBarry Smith Note: 159365b711fSMark Adams The cuSparse LU solver currently computes the factors with the built-in CPU method 160365b711fSMark Adams and moves the factors to the GPU for the solve. We have observed better performance keeping the data on the CPU and computing the solve there. 161365b711fSMark Adams This method to specify if the solve is done on the CPU or GPU (GPU is the default). 162365b711fSMark Adams 1632ef1f0ffSBarry Smith .seealso: [](chapter_matrices), `Mat`, `MatSolve()`, `MATSEQAIJCUSPARSE`, `MatCUSPARSEStorageFormat`, `MatCUSPARSEFormatOperation` 164365b711fSMark Adams @*/ 165d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCUSPARSESetUseCPUSolve(Mat A, PetscBool use_cpu) 166d71ae5a4SJacob Faibussowitsch { 167365b711fSMark Adams PetscFunctionBegin; 168365b711fSMark Adams PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 169cac4c232SBarry Smith PetscTryMethod(A, "MatCUSPARSESetUseCPUSolve_C", (Mat, PetscBool), (A, use_cpu)); 1703ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 171365b711fSMark Adams } 172365b711fSMark Adams 173d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSetOption_SeqAIJCUSPARSE(Mat A, MatOption op, PetscBool flg) 174d71ae5a4SJacob Faibussowitsch { 175e6e9a74fSStefano Zampini PetscFunctionBegin; 1761a2c6b5cSJunchao Zhang switch (op) { 1771a2c6b5cSJunchao Zhang case MAT_FORM_EXPLICIT_TRANSPOSE: 1781a2c6b5cSJunchao Zhang /* need to destroy the transpose matrix if present to prevent from logic errors if flg is set to true later */ 1799566063dSJacob Faibussowitsch if (A->form_explicit_transpose && !flg) PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(A, PETSC_TRUE)); 1801a2c6b5cSJunchao Zhang A->form_explicit_transpose = flg; 1811a2c6b5cSJunchao Zhang break; 182d71ae5a4SJacob Faibussowitsch default: 183d71ae5a4SJacob Faibussowitsch PetscCall(MatSetOption_SeqAIJ(A, op, flg)); 184d71ae5a4SJacob Faibussowitsch break; 185e6e9a74fSStefano Zampini } 1863ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 187e6e9a74fSStefano Zampini } 188e6e9a74fSStefano Zampini 189bddcd29dSMark Adams static PetscErrorCode MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(Mat A); 190bddcd29dSMark Adams 191d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatLUFactorNumeric_SeqAIJCUSPARSE(Mat B, Mat A, const MatFactorInfo *info) 192d71ae5a4SJacob Faibussowitsch { 193bddcd29dSMark Adams Mat_SeqAIJ *b = (Mat_SeqAIJ *)B->data; 194bddcd29dSMark Adams IS isrow = b->row, iscol = b->col; 195bddcd29dSMark Adams PetscBool row_identity, col_identity; 196365b711fSMark Adams Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE *)B->spptr; 197bddcd29dSMark Adams 198bddcd29dSMark Adams PetscFunctionBegin; 1999566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyFromGPU(A)); 2009566063dSJacob Faibussowitsch PetscCall(MatLUFactorNumeric_SeqAIJ(B, A, info)); 201bddcd29dSMark Adams B->offloadmask = PETSC_OFFLOAD_CPU; 202bddcd29dSMark Adams /* determine which version of MatSolve needs to be used. */ 2039566063dSJacob Faibussowitsch PetscCall(ISIdentity(isrow, &row_identity)); 2049566063dSJacob Faibussowitsch PetscCall(ISIdentity(iscol, &col_identity)); 205f93f8571SJunchao Zhang 206365b711fSMark Adams if (!cusparsestruct->use_cpu_solve) { 207f93f8571SJunchao Zhang if (row_identity && col_identity) { 208bddcd29dSMark Adams B->ops->solve = MatSolve_SeqAIJCUSPARSE_NaturalOrdering; 209bddcd29dSMark Adams B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering; 210bddcd29dSMark Adams } else { 211bddcd29dSMark Adams B->ops->solve = MatSolve_SeqAIJCUSPARSE; 212bddcd29dSMark Adams B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE; 213365b711fSMark Adams } 214f93f8571SJunchao Zhang } 215bddcd29dSMark Adams B->ops->matsolve = NULL; 216bddcd29dSMark Adams B->ops->matsolvetranspose = NULL; 217bddcd29dSMark Adams 218bddcd29dSMark Adams /* get the triangular factors */ 21948a46eb9SPierre Jolivet if (!cusparsestruct->use_cpu_solve) PetscCall(MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(B)); 2203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 221bddcd29dSMark Adams } 222bddcd29dSMark Adams 223d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetFromOptions_SeqAIJCUSPARSE(Mat A, PetscOptionItems *PetscOptionsObject) 224d71ae5a4SJacob Faibussowitsch { 225e057df02SPaul Mullowney MatCUSPARSEStorageFormat format; 2269ae82921SPaul Mullowney PetscBool flg; 227a183c035SDominic Meiser Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE *)A->spptr; 2286e111a19SKarl Rupp 2299ae82921SPaul Mullowney PetscFunctionBegin; 230d0609cedSBarry Smith PetscOptionsHeadBegin(PetscOptionsObject, "SeqAIJCUSPARSE options"); 2319ae82921SPaul Mullowney if (A->factortype == MAT_FACTOR_NONE) { 2329371c9d4SSatish Balay PetscCall(PetscOptionsEnum("-mat_cusparse_mult_storage_format", "sets storage format of (seq)aijcusparse gpu matrices for SpMV", "MatCUSPARSESetFormat", MatCUSPARSEStorageFormats, (PetscEnum)cusparsestruct->format, (PetscEnum *)&format, &flg)); 2339566063dSJacob Faibussowitsch if (flg) PetscCall(MatCUSPARSESetFormat(A, MAT_CUSPARSE_MULT, format)); 234afb2bd1cSJunchao Zhang 2359371c9d4SSatish Balay PetscCall(PetscOptionsEnum("-mat_cusparse_storage_format", "sets storage format of (seq)aijcusparse gpu matrices for SpMV and TriSolve", "MatCUSPARSESetFormat", MatCUSPARSEStorageFormats, (PetscEnum)cusparsestruct->format, (PetscEnum *)&format, &flg)); 2369566063dSJacob Faibussowitsch if (flg) PetscCall(MatCUSPARSESetFormat(A, MAT_CUSPARSE_ALL, format)); 2379566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mat_cusparse_use_cpu_solve", "Use CPU (I)LU solve", "MatCUSPARSESetUseCPUSolve", cusparsestruct->use_cpu_solve, &cusparsestruct->use_cpu_solve, &flg)); 2389566063dSJacob Faibussowitsch if (flg) PetscCall(MatCUSPARSESetUseCPUSolve(A, cusparsestruct->use_cpu_solve)); 239afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 2409371c9d4SSatish Balay PetscCall(PetscOptionsEnum("-mat_cusparse_spmv_alg", "sets cuSPARSE algorithm used in sparse-mat dense-vector multiplication (SpMV)", "cusparseSpMVAlg_t", MatCUSPARSESpMVAlgorithms, (PetscEnum)cusparsestruct->spmvAlg, (PetscEnum *)&cusparsestruct->spmvAlg, &flg)); 241afb2bd1cSJunchao Zhang /* If user did use this option, check its consistency with cuSPARSE, since PetscOptionsEnum() sets enum values based on their position in MatCUSPARSESpMVAlgorithms[] */ 242ba986b86SSatish Balay #if CUSPARSE_VERSION > 11301 243aed4548fSBarry Smith PetscCheck(!flg || CUSPARSE_SPMV_CSR_ALG1 == 2, PETSC_COMM_SELF, PETSC_ERR_SUP, "cuSPARSE enum cusparseSpMVAlg_t has been changed but PETSc has not been updated accordingly"); 244a435da06SStefano Zampini #else 245aed4548fSBarry Smith PetscCheck(!flg || CUSPARSE_CSRMV_ALG1 == 2, PETSC_COMM_SELF, PETSC_ERR_SUP, "cuSPARSE enum cusparseSpMVAlg_t has been changed but PETSc has not been updated accordingly"); 246a435da06SStefano Zampini #endif 2479371c9d4SSatish Balay PetscCall(PetscOptionsEnum("-mat_cusparse_spmm_alg", "sets cuSPARSE algorithm used in sparse-mat dense-mat multiplication (SpMM)", "cusparseSpMMAlg_t", MatCUSPARSESpMMAlgorithms, (PetscEnum)cusparsestruct->spmmAlg, (PetscEnum *)&cusparsestruct->spmmAlg, &flg)); 248aed4548fSBarry Smith PetscCheck(!flg || CUSPARSE_SPMM_CSR_ALG1 == 4, PETSC_COMM_SELF, PETSC_ERR_SUP, "cuSPARSE enum cusparseSpMMAlg_t has been changed but PETSc has not been updated accordingly"); 249afb2bd1cSJunchao Zhang 2509371c9d4SSatish Balay PetscCall( 2519371c9d4SSatish Balay PetscOptionsEnum("-mat_cusparse_csr2csc_alg", "sets cuSPARSE algorithm used in converting CSR matrices to CSC matrices", "cusparseCsr2CscAlg_t", MatCUSPARSECsr2CscAlgorithms, (PetscEnum)cusparsestruct->csr2cscAlg, (PetscEnum *)&cusparsestruct->csr2cscAlg, &flg)); 252aed4548fSBarry Smith PetscCheck(!flg || CUSPARSE_CSR2CSC_ALG1 == 1, PETSC_COMM_SELF, PETSC_ERR_SUP, "cuSPARSE enum cusparseCsr2CscAlg_t has been changed but PETSc has not been updated accordingly"); 253afb2bd1cSJunchao Zhang #endif 2544c87dfd4SPaul Mullowney } 255d0609cedSBarry Smith PetscOptionsHeadEnd(); 2563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2579ae82921SPaul Mullowney } 2589ae82921SPaul Mullowney 259d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJCUSPARSEBuildILULowerTriMatrix(Mat A) 260d71ae5a4SJacob Faibussowitsch { 2619ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 2629ae82921SPaul Mullowney PetscInt n = A->rmap->n; 2639ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors *)A->spptr; 264aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct *)cusparseTriFactors->loTriFactorPtr; 2659ae82921SPaul Mullowney const PetscInt *ai = a->i, *aj = a->j, *vi; 2669ae82921SPaul Mullowney const MatScalar *aa = a->a, *v; 2679ae82921SPaul Mullowney PetscInt *AiLo, *AjLo; 2689ae82921SPaul Mullowney PetscInt i, nz, nzLower, offset, rowOffset; 2699ae82921SPaul Mullowney 2709ae82921SPaul Mullowney PetscFunctionBegin; 2713ba16761SJacob Faibussowitsch if (!n) PetscFunctionReturn(PETSC_SUCCESS); 272c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 2739ae82921SPaul Mullowney try { 2749ae82921SPaul Mullowney /* first figure out the number of nonzeros in the lower triangular matrix including 1's on the diagonal. */ 2759ae82921SPaul Mullowney nzLower = n + ai[n] - ai[1]; 276da79fbbcSStefano Zampini if (!loTriFactor) { 2772cbc15d9SMark PetscScalar *AALo; 2782cbc15d9SMark 2799566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void **)&AALo, nzLower * sizeof(PetscScalar))); 2809ae82921SPaul Mullowney 2819ae82921SPaul Mullowney /* Allocate Space for the lower triangular matrix */ 2829566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void **)&AiLo, (n + 1) * sizeof(PetscInt))); 2839566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void **)&AjLo, nzLower * sizeof(PetscInt))); 2849ae82921SPaul Mullowney 2859ae82921SPaul Mullowney /* Fill the lower triangular matrix */ 2869ae82921SPaul Mullowney AiLo[0] = (PetscInt)0; 2879ae82921SPaul Mullowney AiLo[n] = nzLower; 2889ae82921SPaul Mullowney AjLo[0] = (PetscInt)0; 2899ae82921SPaul Mullowney AALo[0] = (MatScalar)1.0; 2909ae82921SPaul Mullowney v = aa; 2919ae82921SPaul Mullowney vi = aj; 2929ae82921SPaul Mullowney offset = 1; 2939ae82921SPaul Mullowney rowOffset = 1; 2949ae82921SPaul Mullowney for (i = 1; i < n; i++) { 2959ae82921SPaul Mullowney nz = ai[i + 1] - ai[i]; 296e057df02SPaul Mullowney /* additional 1 for the term on the diagonal */ 2979ae82921SPaul Mullowney AiLo[i] = rowOffset; 2989ae82921SPaul Mullowney rowOffset += nz + 1; 2999ae82921SPaul Mullowney 3009566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&(AjLo[offset]), vi, nz)); 3019566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&(AALo[offset]), v, nz)); 3029ae82921SPaul Mullowney 3039ae82921SPaul Mullowney offset += nz; 3049ae82921SPaul Mullowney AjLo[offset] = (PetscInt)i; 3059ae82921SPaul Mullowney AALo[offset] = (MatScalar)1.0; 3069ae82921SPaul Mullowney offset += 1; 3079ae82921SPaul Mullowney 3089ae82921SPaul Mullowney v += nz; 3099ae82921SPaul Mullowney vi += nz; 3109ae82921SPaul Mullowney } 3112205254eSKarl Rupp 312aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 3139566063dSJacob Faibussowitsch PetscCall(PetscNew(&loTriFactor)); 314da79fbbcSStefano Zampini loTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 315aa372e3fSPaul Mullowney /* Create the matrix description */ 3169566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&loTriFactor->descr)); 3179566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(loTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO)); 3181b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9, 0, 0) 3199566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL)); 320afb2bd1cSJunchao Zhang #else 3219566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR)); 322afb2bd1cSJunchao Zhang #endif 3239566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatFillMode(loTriFactor->descr, CUSPARSE_FILL_MODE_LOWER)); 3249566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatDiagType(loTriFactor->descr, CUSPARSE_DIAG_TYPE_UNIT)); 325aa372e3fSPaul Mullowney 326aa372e3fSPaul Mullowney /* set the operation */ 327aa372e3fSPaul Mullowney loTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 328aa372e3fSPaul Mullowney 329aa372e3fSPaul Mullowney /* set the matrix */ 330aa372e3fSPaul Mullowney loTriFactor->csrMat = new CsrMatrix; 331aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows = n; 332aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols = n; 333aa372e3fSPaul Mullowney loTriFactor->csrMat->num_entries = nzLower; 334aa372e3fSPaul Mullowney 335aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(n + 1); 336aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->assign(AiLo, AiLo + n + 1); 337aa372e3fSPaul Mullowney 338aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(nzLower); 339aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->assign(AjLo, AjLo + nzLower); 340aa372e3fSPaul Mullowney 341aa372e3fSPaul Mullowney loTriFactor->csrMat->values = new THRUSTARRAY(nzLower); 342aa372e3fSPaul Mullowney loTriFactor->csrMat->values->assign(AALo, AALo + nzLower); 343aa372e3fSPaul Mullowney 344afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 3459566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSESolveAnalysis, A, 0, 0, 0)); 346261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseCreateCsrsvInfo(&loTriFactor->solveInfo)); 3471b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9, 0, 0) 3489371c9d4SSatish Balay PetscCallCUSPARSE(cusparseXcsrsv_buffsize(cusparseTriFactors->handle, loTriFactor->solveOp, loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, loTriFactor->csrMat->values->data().get(), 3499371c9d4SSatish Balay loTriFactor->csrMat->row_offsets->data().get(), loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo, &loTriFactor->solveBufferSize)); 3509566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&loTriFactor->solveBuffer, loTriFactor->solveBufferSize)); 351afb2bd1cSJunchao Zhang #endif 352afb2bd1cSJunchao Zhang 353aa372e3fSPaul Mullowney /* perform the solve analysis */ 3549371c9d4SSatish Balay PetscCallCUSPARSE(cusparseXcsrsv_analysis(cusparseTriFactors->handle, loTriFactor->solveOp, loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, loTriFactor->csrMat->values->data().get(), 3559f7ba44dSJacob Faibussowitsch loTriFactor->csrMat->row_offsets->data().get(), loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo, loTriFactor->solvePolicy, loTriFactor->solveBuffer)); 3569566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 3579566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSESolveAnalysis, A, 0, 0, 0)); 358aa372e3fSPaul Mullowney 359da79fbbcSStefano Zampini /* assign the pointer */ 360aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors *)A->spptr)->loTriFactorPtr = loTriFactor; 3612cbc15d9SMark loTriFactor->AA_h = AALo; 3629566063dSJacob Faibussowitsch PetscCallCUDA(cudaFreeHost(AiLo)); 3639566063dSJacob Faibussowitsch PetscCallCUDA(cudaFreeHost(AjLo)); 3649566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu((n + 1 + nzLower) * sizeof(int) + nzLower * sizeof(PetscScalar))); 365da79fbbcSStefano Zampini } else { /* update values only */ 36648a46eb9SPierre Jolivet if (!loTriFactor->AA_h) PetscCallCUDA(cudaMallocHost((void **)&loTriFactor->AA_h, nzLower * sizeof(PetscScalar))); 367da79fbbcSStefano Zampini /* Fill the lower triangular matrix */ 3682cbc15d9SMark loTriFactor->AA_h[0] = 1.0; 369da79fbbcSStefano Zampini v = aa; 370da79fbbcSStefano Zampini vi = aj; 371da79fbbcSStefano Zampini offset = 1; 372da79fbbcSStefano Zampini for (i = 1; i < n; i++) { 373da79fbbcSStefano Zampini nz = ai[i + 1] - ai[i]; 3749566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&(loTriFactor->AA_h[offset]), v, nz)); 375da79fbbcSStefano Zampini offset += nz; 3762cbc15d9SMark loTriFactor->AA_h[offset] = 1.0; 377da79fbbcSStefano Zampini offset += 1; 378da79fbbcSStefano Zampini v += nz; 379da79fbbcSStefano Zampini } 3802cbc15d9SMark loTriFactor->csrMat->values->assign(loTriFactor->AA_h, loTriFactor->AA_h + nzLower); 3819566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(nzLower * sizeof(PetscScalar))); 382da79fbbcSStefano Zampini } 383d71ae5a4SJacob Faibussowitsch } catch (char *ex) { 384d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_LIB, "CUSPARSE error: %s", ex); 385d71ae5a4SJacob Faibussowitsch } 3869ae82921SPaul Mullowney } 3873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3889ae82921SPaul Mullowney } 3899ae82921SPaul Mullowney 390d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJCUSPARSEBuildILUUpperTriMatrix(Mat A) 391d71ae5a4SJacob Faibussowitsch { 3929ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 3939ae82921SPaul Mullowney PetscInt n = A->rmap->n; 3949ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors *)A->spptr; 395aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct *)cusparseTriFactors->upTriFactorPtr; 3969ae82921SPaul Mullowney const PetscInt *aj = a->j, *adiag = a->diag, *vi; 3979ae82921SPaul Mullowney const MatScalar *aa = a->a, *v; 3989ae82921SPaul Mullowney PetscInt *AiUp, *AjUp; 3999ae82921SPaul Mullowney PetscInt i, nz, nzUpper, offset; 4009ae82921SPaul Mullowney 4019ae82921SPaul Mullowney PetscFunctionBegin; 4023ba16761SJacob Faibussowitsch if (!n) PetscFunctionReturn(PETSC_SUCCESS); 403c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 4049ae82921SPaul Mullowney try { 4059ae82921SPaul Mullowney /* next, figure out the number of nonzeros in the upper triangular matrix. */ 4069ae82921SPaul Mullowney nzUpper = adiag[0] - adiag[n]; 407da79fbbcSStefano Zampini if (!upTriFactor) { 4082cbc15d9SMark PetscScalar *AAUp; 4092cbc15d9SMark 4109566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void **)&AAUp, nzUpper * sizeof(PetscScalar))); 4112cbc15d9SMark 4129ae82921SPaul Mullowney /* Allocate Space for the upper triangular matrix */ 4139566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void **)&AiUp, (n + 1) * sizeof(PetscInt))); 4149566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void **)&AjUp, nzUpper * sizeof(PetscInt))); 4159ae82921SPaul Mullowney 4169ae82921SPaul Mullowney /* Fill the upper triangular matrix */ 4179ae82921SPaul Mullowney AiUp[0] = (PetscInt)0; 4189ae82921SPaul Mullowney AiUp[n] = nzUpper; 4199ae82921SPaul Mullowney offset = nzUpper; 4209ae82921SPaul Mullowney for (i = n - 1; i >= 0; i--) { 4219ae82921SPaul Mullowney v = aa + adiag[i + 1] + 1; 4229ae82921SPaul Mullowney vi = aj + adiag[i + 1] + 1; 4239ae82921SPaul Mullowney 424e057df02SPaul Mullowney /* number of elements NOT on the diagonal */ 4259ae82921SPaul Mullowney nz = adiag[i] - adiag[i + 1] - 1; 4269ae82921SPaul Mullowney 427e057df02SPaul Mullowney /* decrement the offset */ 4289ae82921SPaul Mullowney offset -= (nz + 1); 4299ae82921SPaul Mullowney 430e057df02SPaul Mullowney /* first, set the diagonal elements */ 4319ae82921SPaul Mullowney AjUp[offset] = (PetscInt)i; 43209f51544SAlejandro Lamas Daviña AAUp[offset] = (MatScalar)1. / v[nz]; 4339ae82921SPaul Mullowney AiUp[i] = AiUp[i + 1] - (nz + 1); 4349ae82921SPaul Mullowney 4359566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&(AjUp[offset + 1]), vi, nz)); 4369566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&(AAUp[offset + 1]), v, nz)); 4379ae82921SPaul Mullowney } 4382205254eSKarl Rupp 439aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 4409566063dSJacob Faibussowitsch PetscCall(PetscNew(&upTriFactor)); 441da79fbbcSStefano Zampini upTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 4422205254eSKarl Rupp 443aa372e3fSPaul Mullowney /* Create the matrix description */ 4449566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&upTriFactor->descr)); 4459566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(upTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO)); 4461b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9, 0, 0) 4479566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL)); 448afb2bd1cSJunchao Zhang #else 4499566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR)); 450afb2bd1cSJunchao Zhang #endif 4519566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatFillMode(upTriFactor->descr, CUSPARSE_FILL_MODE_UPPER)); 4529566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatDiagType(upTriFactor->descr, CUSPARSE_DIAG_TYPE_NON_UNIT)); 453aa372e3fSPaul Mullowney 454aa372e3fSPaul Mullowney /* set the operation */ 455aa372e3fSPaul Mullowney upTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 456aa372e3fSPaul Mullowney 457aa372e3fSPaul Mullowney /* set the matrix */ 458aa372e3fSPaul Mullowney upTriFactor->csrMat = new CsrMatrix; 459aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows = n; 460aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols = n; 461aa372e3fSPaul Mullowney upTriFactor->csrMat->num_entries = nzUpper; 462aa372e3fSPaul Mullowney 463aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(n + 1); 464aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->assign(AiUp, AiUp + n + 1); 465aa372e3fSPaul Mullowney 466aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(nzUpper); 467aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->assign(AjUp, AjUp + nzUpper); 468aa372e3fSPaul Mullowney 469aa372e3fSPaul Mullowney upTriFactor->csrMat->values = new THRUSTARRAY(nzUpper); 470aa372e3fSPaul Mullowney upTriFactor->csrMat->values->assign(AAUp, AAUp + nzUpper); 471aa372e3fSPaul Mullowney 472afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 4739566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSESolveAnalysis, A, 0, 0, 0)); 474261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseCreateCsrsvInfo(&upTriFactor->solveInfo)); 4751b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9, 0, 0) 4769371c9d4SSatish Balay PetscCallCUSPARSE(cusparseXcsrsv_buffsize(cusparseTriFactors->handle, upTriFactor->solveOp, upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, upTriFactor->csrMat->values->data().get(), 4779371c9d4SSatish Balay upTriFactor->csrMat->row_offsets->data().get(), upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo, &upTriFactor->solveBufferSize)); 4789566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&upTriFactor->solveBuffer, upTriFactor->solveBufferSize)); 479afb2bd1cSJunchao Zhang #endif 480afb2bd1cSJunchao Zhang 481aa372e3fSPaul Mullowney /* perform the solve analysis */ 4829371c9d4SSatish Balay PetscCallCUSPARSE(cusparseXcsrsv_analysis(cusparseTriFactors->handle, upTriFactor->solveOp, upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, upTriFactor->csrMat->values->data().get(), 4839f7ba44dSJacob Faibussowitsch upTriFactor->csrMat->row_offsets->data().get(), upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo, upTriFactor->solvePolicy, upTriFactor->solveBuffer)); 4849f7ba44dSJacob Faibussowitsch 4859566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 4869566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSESolveAnalysis, A, 0, 0, 0)); 487aa372e3fSPaul Mullowney 488da79fbbcSStefano Zampini /* assign the pointer */ 489aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors *)A->spptr)->upTriFactorPtr = upTriFactor; 4902cbc15d9SMark upTriFactor->AA_h = AAUp; 4919566063dSJacob Faibussowitsch PetscCallCUDA(cudaFreeHost(AiUp)); 4929566063dSJacob Faibussowitsch PetscCallCUDA(cudaFreeHost(AjUp)); 4939566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu((n + 1 + nzUpper) * sizeof(int) + nzUpper * sizeof(PetscScalar))); 494da79fbbcSStefano Zampini } else { 49548a46eb9SPierre Jolivet if (!upTriFactor->AA_h) PetscCallCUDA(cudaMallocHost((void **)&upTriFactor->AA_h, nzUpper * sizeof(PetscScalar))); 496da79fbbcSStefano Zampini /* Fill the upper triangular matrix */ 497da79fbbcSStefano Zampini offset = nzUpper; 498da79fbbcSStefano Zampini for (i = n - 1; i >= 0; i--) { 499da79fbbcSStefano Zampini v = aa + adiag[i + 1] + 1; 500da79fbbcSStefano Zampini 501da79fbbcSStefano Zampini /* number of elements NOT on the diagonal */ 502da79fbbcSStefano Zampini nz = adiag[i] - adiag[i + 1] - 1; 503da79fbbcSStefano Zampini 504da79fbbcSStefano Zampini /* decrement the offset */ 505da79fbbcSStefano Zampini offset -= (nz + 1); 506da79fbbcSStefano Zampini 507da79fbbcSStefano Zampini /* first, set the diagonal elements */ 5082cbc15d9SMark upTriFactor->AA_h[offset] = 1. / v[nz]; 5099566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&(upTriFactor->AA_h[offset + 1]), v, nz)); 510da79fbbcSStefano Zampini } 5112cbc15d9SMark upTriFactor->csrMat->values->assign(upTriFactor->AA_h, upTriFactor->AA_h + nzUpper); 5129566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(nzUpper * sizeof(PetscScalar))); 513da79fbbcSStefano Zampini } 514d71ae5a4SJacob Faibussowitsch } catch (char *ex) { 515d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_LIB, "CUSPARSE error: %s", ex); 516d71ae5a4SJacob Faibussowitsch } 5179ae82921SPaul Mullowney } 5183ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5199ae82921SPaul Mullowney } 5209ae82921SPaul Mullowney 521d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(Mat A) 522d71ae5a4SJacob Faibussowitsch { 5239ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 5249ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors *)A->spptr; 5259ae82921SPaul Mullowney IS isrow = a->row, iscol = a->icol; 5269ae82921SPaul Mullowney PetscBool row_identity, col_identity; 5279ae82921SPaul Mullowney PetscInt n = A->rmap->n; 5289ae82921SPaul Mullowney 5299ae82921SPaul Mullowney PetscFunctionBegin; 53028b400f6SJacob Faibussowitsch PetscCheck(cusparseTriFactors, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing cusparseTriFactors"); 5319566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEBuildILULowerTriMatrix(A)); 5329566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEBuildILUUpperTriMatrix(A)); 5332205254eSKarl Rupp 534ad540459SPierre Jolivet if (!cusparseTriFactors->workVector) cusparseTriFactors->workVector = new THRUSTARRAY(n); 535aa372e3fSPaul Mullowney cusparseTriFactors->nnz = a->nz; 5369ae82921SPaul Mullowney 537c70f7ee4SJunchao Zhang A->offloadmask = PETSC_OFFLOAD_BOTH; 538e057df02SPaul Mullowney /* lower triangular indices */ 5399566063dSJacob Faibussowitsch PetscCall(ISIdentity(isrow, &row_identity)); 540da79fbbcSStefano Zampini if (!row_identity && !cusparseTriFactors->rpermIndices) { 541da79fbbcSStefano Zampini const PetscInt *r; 542da79fbbcSStefano Zampini 5439566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isrow, &r)); 544aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices = new THRUSTINTARRAY(n); 545aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices->assign(r, r + n); 5469566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow, &r)); 5479566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(n * sizeof(PetscInt))); 548da79fbbcSStefano Zampini } 5499ae82921SPaul Mullowney 550e057df02SPaul Mullowney /* upper triangular indices */ 5519566063dSJacob Faibussowitsch PetscCall(ISIdentity(iscol, &col_identity)); 552da79fbbcSStefano Zampini if (!col_identity && !cusparseTriFactors->cpermIndices) { 553da79fbbcSStefano Zampini const PetscInt *c; 554da79fbbcSStefano Zampini 5559566063dSJacob Faibussowitsch PetscCall(ISGetIndices(iscol, &c)); 556aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices = new THRUSTINTARRAY(n); 557aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices->assign(c, c + n); 5589566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iscol, &c)); 5599566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(n * sizeof(PetscInt))); 560da79fbbcSStefano Zampini } 5613ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5629ae82921SPaul Mullowney } 5639ae82921SPaul Mullowney 564d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJCUSPARSEBuildICCTriMatrices(Mat A) 565d71ae5a4SJacob Faibussowitsch { 566087f3262SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 567087f3262SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors *)A->spptr; 568aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct *)cusparseTriFactors->loTriFactorPtr; 569aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct *)cusparseTriFactors->upTriFactorPtr; 570087f3262SPaul Mullowney PetscInt *AiUp, *AjUp; 571087f3262SPaul Mullowney PetscScalar *AAUp; 572087f3262SPaul Mullowney PetscScalar *AALo; 573087f3262SPaul Mullowney PetscInt nzUpper = a->nz, n = A->rmap->n, i, offset, nz, j; 574087f3262SPaul Mullowney Mat_SeqSBAIJ *b = (Mat_SeqSBAIJ *)A->data; 575087f3262SPaul Mullowney const PetscInt *ai = b->i, *aj = b->j, *vj; 576087f3262SPaul Mullowney const MatScalar *aa = b->a, *v; 577087f3262SPaul Mullowney 578087f3262SPaul Mullowney PetscFunctionBegin; 5793ba16761SJacob Faibussowitsch if (!n) PetscFunctionReturn(PETSC_SUCCESS); 580c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 581087f3262SPaul Mullowney try { 5829566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void **)&AAUp, nzUpper * sizeof(PetscScalar))); 5839566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void **)&AALo, nzUpper * sizeof(PetscScalar))); 584da79fbbcSStefano Zampini if (!upTriFactor && !loTriFactor) { 585087f3262SPaul Mullowney /* Allocate Space for the upper triangular matrix */ 5869566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void **)&AiUp, (n + 1) * sizeof(PetscInt))); 5879566063dSJacob Faibussowitsch PetscCallCUDA(cudaMallocHost((void **)&AjUp, nzUpper * sizeof(PetscInt))); 588087f3262SPaul Mullowney 589087f3262SPaul Mullowney /* Fill the upper triangular matrix */ 590087f3262SPaul Mullowney AiUp[0] = (PetscInt)0; 591087f3262SPaul Mullowney AiUp[n] = nzUpper; 592087f3262SPaul Mullowney offset = 0; 593087f3262SPaul Mullowney for (i = 0; i < n; i++) { 594087f3262SPaul Mullowney /* set the pointers */ 595087f3262SPaul Mullowney v = aa + ai[i]; 596087f3262SPaul Mullowney vj = aj + ai[i]; 597087f3262SPaul Mullowney nz = ai[i + 1] - ai[i] - 1; /* exclude diag[i] */ 598087f3262SPaul Mullowney 599087f3262SPaul Mullowney /* first, set the diagonal elements */ 600087f3262SPaul Mullowney AjUp[offset] = (PetscInt)i; 60109f51544SAlejandro Lamas Daviña AAUp[offset] = (MatScalar)1.0 / v[nz]; 602087f3262SPaul Mullowney AiUp[i] = offset; 60309f51544SAlejandro Lamas Daviña AALo[offset] = (MatScalar)1.0 / v[nz]; 604087f3262SPaul Mullowney 605087f3262SPaul Mullowney offset += 1; 606087f3262SPaul Mullowney if (nz > 0) { 6079566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&(AjUp[offset]), vj, nz)); 6089566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&(AAUp[offset]), v, nz)); 609087f3262SPaul Mullowney for (j = offset; j < offset + nz; j++) { 610087f3262SPaul Mullowney AAUp[j] = -AAUp[j]; 611087f3262SPaul Mullowney AALo[j] = AAUp[j] / v[nz]; 612087f3262SPaul Mullowney } 613087f3262SPaul Mullowney offset += nz; 614087f3262SPaul Mullowney } 615087f3262SPaul Mullowney } 616087f3262SPaul Mullowney 617aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 6189566063dSJacob Faibussowitsch PetscCall(PetscNew(&upTriFactor)); 619da79fbbcSStefano Zampini upTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 620087f3262SPaul Mullowney 621aa372e3fSPaul Mullowney /* Create the matrix description */ 6229566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&upTriFactor->descr)); 6239566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(upTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO)); 6241b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9, 0, 0) 6259566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL)); 626afb2bd1cSJunchao Zhang #else 6279566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR)); 628afb2bd1cSJunchao Zhang #endif 6299566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatFillMode(upTriFactor->descr, CUSPARSE_FILL_MODE_UPPER)); 6309566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatDiagType(upTriFactor->descr, CUSPARSE_DIAG_TYPE_UNIT)); 631087f3262SPaul Mullowney 632aa372e3fSPaul Mullowney /* set the matrix */ 633aa372e3fSPaul Mullowney upTriFactor->csrMat = new CsrMatrix; 634aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows = A->rmap->n; 635aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols = A->cmap->n; 636aa372e3fSPaul Mullowney upTriFactor->csrMat->num_entries = a->nz; 637aa372e3fSPaul Mullowney 638aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(A->rmap->n + 1); 639aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->assign(AiUp, AiUp + A->rmap->n + 1); 640aa372e3fSPaul Mullowney 641aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(a->nz); 642aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->assign(AjUp, AjUp + a->nz); 643aa372e3fSPaul Mullowney 644aa372e3fSPaul Mullowney upTriFactor->csrMat->values = new THRUSTARRAY(a->nz); 645aa372e3fSPaul Mullowney upTriFactor->csrMat->values->assign(AAUp, AAUp + a->nz); 646aa372e3fSPaul Mullowney 647afb2bd1cSJunchao Zhang /* set the operation */ 648afb2bd1cSJunchao Zhang upTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 649afb2bd1cSJunchao Zhang 650afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 6519566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSESolveAnalysis, A, 0, 0, 0)); 652261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseCreateCsrsvInfo(&upTriFactor->solveInfo)); 6531b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9, 0, 0) 6549371c9d4SSatish Balay PetscCallCUSPARSE(cusparseXcsrsv_buffsize(cusparseTriFactors->handle, upTriFactor->solveOp, upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, upTriFactor->csrMat->values->data().get(), 6559371c9d4SSatish Balay upTriFactor->csrMat->row_offsets->data().get(), upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo, &upTriFactor->solveBufferSize)); 6569566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&upTriFactor->solveBuffer, upTriFactor->solveBufferSize)); 657afb2bd1cSJunchao Zhang #endif 658afb2bd1cSJunchao Zhang 659aa372e3fSPaul Mullowney /* perform the solve analysis */ 6609371c9d4SSatish Balay PetscCallCUSPARSE(cusparseXcsrsv_analysis(cusparseTriFactors->handle, upTriFactor->solveOp, upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, upTriFactor->csrMat->values->data().get(), 6619f7ba44dSJacob Faibussowitsch upTriFactor->csrMat->row_offsets->data().get(), upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo, upTriFactor->solvePolicy, upTriFactor->solveBuffer)); 6629f7ba44dSJacob Faibussowitsch 6639566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 6649566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSESolveAnalysis, A, 0, 0, 0)); 665aa372e3fSPaul Mullowney 666da79fbbcSStefano Zampini /* assign the pointer */ 667aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors *)A->spptr)->upTriFactorPtr = upTriFactor; 668aa372e3fSPaul Mullowney 669aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 6709566063dSJacob Faibussowitsch PetscCall(PetscNew(&loTriFactor)); 671da79fbbcSStefano Zampini loTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 672aa372e3fSPaul Mullowney 673aa372e3fSPaul Mullowney /* Create the matrix description */ 6749566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&loTriFactor->descr)); 6759566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(loTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO)); 6761b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9, 0, 0) 6779566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL)); 678afb2bd1cSJunchao Zhang #else 6799566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR)); 680afb2bd1cSJunchao Zhang #endif 6819566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatFillMode(loTriFactor->descr, CUSPARSE_FILL_MODE_UPPER)); 6829566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatDiagType(loTriFactor->descr, CUSPARSE_DIAG_TYPE_NON_UNIT)); 683aa372e3fSPaul Mullowney 684aa372e3fSPaul Mullowney /* set the operation */ 685aa372e3fSPaul Mullowney loTriFactor->solveOp = CUSPARSE_OPERATION_TRANSPOSE; 686aa372e3fSPaul Mullowney 687aa372e3fSPaul Mullowney /* set the matrix */ 688aa372e3fSPaul Mullowney loTriFactor->csrMat = new CsrMatrix; 689aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows = A->rmap->n; 690aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols = A->cmap->n; 691aa372e3fSPaul Mullowney loTriFactor->csrMat->num_entries = a->nz; 692aa372e3fSPaul Mullowney 693aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(A->rmap->n + 1); 694aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->assign(AiUp, AiUp + A->rmap->n + 1); 695aa372e3fSPaul Mullowney 696aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(a->nz); 697aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->assign(AjUp, AjUp + a->nz); 698aa372e3fSPaul Mullowney 699aa372e3fSPaul Mullowney loTriFactor->csrMat->values = new THRUSTARRAY(a->nz); 700aa372e3fSPaul Mullowney loTriFactor->csrMat->values->assign(AALo, AALo + a->nz); 701aa372e3fSPaul Mullowney 702afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 7039566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSESolveAnalysis, A, 0, 0, 0)); 704261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseCreateCsrsvInfo(&loTriFactor->solveInfo)); 7051b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9, 0, 0) 7069371c9d4SSatish Balay PetscCallCUSPARSE(cusparseXcsrsv_buffsize(cusparseTriFactors->handle, loTriFactor->solveOp, loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, loTriFactor->csrMat->values->data().get(), 7079371c9d4SSatish Balay loTriFactor->csrMat->row_offsets->data().get(), loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo, &loTriFactor->solveBufferSize)); 7089566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&loTriFactor->solveBuffer, loTriFactor->solveBufferSize)); 709afb2bd1cSJunchao Zhang #endif 710afb2bd1cSJunchao Zhang 711aa372e3fSPaul Mullowney /* perform the solve analysis */ 7129371c9d4SSatish Balay PetscCallCUSPARSE(cusparseXcsrsv_analysis(cusparseTriFactors->handle, loTriFactor->solveOp, loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, loTriFactor->csrMat->values->data().get(), 7139f7ba44dSJacob Faibussowitsch loTriFactor->csrMat->row_offsets->data().get(), loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo, loTriFactor->solvePolicy, loTriFactor->solveBuffer)); 7149f7ba44dSJacob Faibussowitsch 7159566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 7169566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSESolveAnalysis, A, 0, 0, 0)); 717aa372e3fSPaul Mullowney 718da79fbbcSStefano Zampini /* assign the pointer */ 719aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors *)A->spptr)->loTriFactorPtr = loTriFactor; 720087f3262SPaul Mullowney 7219566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(2 * (((A->rmap->n + 1) + (a->nz)) * sizeof(int) + (a->nz) * sizeof(PetscScalar)))); 7229566063dSJacob Faibussowitsch PetscCallCUDA(cudaFreeHost(AiUp)); 7239566063dSJacob Faibussowitsch PetscCallCUDA(cudaFreeHost(AjUp)); 724da79fbbcSStefano Zampini } else { 725da79fbbcSStefano Zampini /* Fill the upper triangular matrix */ 726da79fbbcSStefano Zampini offset = 0; 727da79fbbcSStefano Zampini for (i = 0; i < n; i++) { 728da79fbbcSStefano Zampini /* set the pointers */ 729da79fbbcSStefano Zampini v = aa + ai[i]; 730da79fbbcSStefano Zampini nz = ai[i + 1] - ai[i] - 1; /* exclude diag[i] */ 731da79fbbcSStefano Zampini 732da79fbbcSStefano Zampini /* first, set the diagonal elements */ 733da79fbbcSStefano Zampini AAUp[offset] = 1.0 / v[nz]; 734da79fbbcSStefano Zampini AALo[offset] = 1.0 / v[nz]; 735da79fbbcSStefano Zampini 736da79fbbcSStefano Zampini offset += 1; 737da79fbbcSStefano Zampini if (nz > 0) { 7389566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&(AAUp[offset]), v, nz)); 739da79fbbcSStefano Zampini for (j = offset; j < offset + nz; j++) { 740da79fbbcSStefano Zampini AAUp[j] = -AAUp[j]; 741da79fbbcSStefano Zampini AALo[j] = AAUp[j] / v[nz]; 742da79fbbcSStefano Zampini } 743da79fbbcSStefano Zampini offset += nz; 744da79fbbcSStefano Zampini } 745da79fbbcSStefano Zampini } 74628b400f6SJacob Faibussowitsch PetscCheck(upTriFactor, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing cusparseTriFactors"); 74728b400f6SJacob Faibussowitsch PetscCheck(loTriFactor, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing cusparseTriFactors"); 748da79fbbcSStefano Zampini upTriFactor->csrMat->values->assign(AAUp, AAUp + a->nz); 749da79fbbcSStefano Zampini loTriFactor->csrMat->values->assign(AALo, AALo + a->nz); 7509566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(2 * (a->nz) * sizeof(PetscScalar))); 751da79fbbcSStefano Zampini } 7529566063dSJacob Faibussowitsch PetscCallCUDA(cudaFreeHost(AAUp)); 7539566063dSJacob Faibussowitsch PetscCallCUDA(cudaFreeHost(AALo)); 754d71ae5a4SJacob Faibussowitsch } catch (char *ex) { 755d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_LIB, "CUSPARSE error: %s", ex); 756d71ae5a4SJacob Faibussowitsch } 757087f3262SPaul Mullowney } 7583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 759087f3262SPaul Mullowney } 760087f3262SPaul Mullowney 761d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJCUSPARSEICCAnalysisAndCopyToGPU(Mat A) 762d71ae5a4SJacob Faibussowitsch { 763087f3262SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 764087f3262SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors *)A->spptr; 765087f3262SPaul Mullowney IS ip = a->row; 766087f3262SPaul Mullowney PetscBool perm_identity; 767087f3262SPaul Mullowney PetscInt n = A->rmap->n; 768087f3262SPaul Mullowney 769087f3262SPaul Mullowney PetscFunctionBegin; 77028b400f6SJacob Faibussowitsch PetscCheck(cusparseTriFactors, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing cusparseTriFactors"); 7719566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEBuildICCTriMatrices(A)); 772ad540459SPierre Jolivet if (!cusparseTriFactors->workVector) cusparseTriFactors->workVector = new THRUSTARRAY(n); 773aa372e3fSPaul Mullowney cusparseTriFactors->nnz = (a->nz - n) * 2 + n; 774aa372e3fSPaul Mullowney 775da79fbbcSStefano Zampini A->offloadmask = PETSC_OFFLOAD_BOTH; 776da79fbbcSStefano Zampini 777087f3262SPaul Mullowney /* lower triangular indices */ 7789566063dSJacob Faibussowitsch PetscCall(ISIdentity(ip, &perm_identity)); 779087f3262SPaul Mullowney if (!perm_identity) { 7804e4bbfaaSStefano Zampini IS iip; 781da79fbbcSStefano Zampini const PetscInt *irip, *rip; 7824e4bbfaaSStefano Zampini 7839566063dSJacob Faibussowitsch PetscCall(ISInvertPermutation(ip, PETSC_DECIDE, &iip)); 7849566063dSJacob Faibussowitsch PetscCall(ISGetIndices(iip, &irip)); 7859566063dSJacob Faibussowitsch PetscCall(ISGetIndices(ip, &rip)); 786aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices = new THRUSTINTARRAY(n); 787aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices->assign(rip, rip + n); 788aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices = new THRUSTINTARRAY(n); 7894e4bbfaaSStefano Zampini cusparseTriFactors->cpermIndices->assign(irip, irip + n); 7909566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iip, &irip)); 7919566063dSJacob Faibussowitsch PetscCall(ISDestroy(&iip)); 7929566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(ip, &rip)); 7939566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(2. * n * sizeof(PetscInt))); 794da79fbbcSStefano Zampini } 7953ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 796087f3262SPaul Mullowney } 797087f3262SPaul Mullowney 798d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatCholeskyFactorNumeric_SeqAIJCUSPARSE(Mat B, Mat A, const MatFactorInfo *info) 799d71ae5a4SJacob Faibussowitsch { 800087f3262SPaul Mullowney Mat_SeqAIJ *b = (Mat_SeqAIJ *)B->data; 801087f3262SPaul Mullowney IS ip = b->row; 802087f3262SPaul Mullowney PetscBool perm_identity; 803087f3262SPaul Mullowney 804087f3262SPaul Mullowney PetscFunctionBegin; 8059566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyFromGPU(A)); 8069566063dSJacob Faibussowitsch PetscCall(MatCholeskyFactorNumeric_SeqAIJ(B, A, info)); 807ccdfe979SStefano Zampini B->offloadmask = PETSC_OFFLOAD_CPU; 808087f3262SPaul Mullowney /* determine which version of MatSolve needs to be used. */ 8099566063dSJacob Faibussowitsch PetscCall(ISIdentity(ip, &perm_identity)); 810087f3262SPaul Mullowney if (perm_identity) { 811087f3262SPaul Mullowney B->ops->solve = MatSolve_SeqAIJCUSPARSE_NaturalOrdering; 812087f3262SPaul Mullowney B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering; 8134e4bbfaaSStefano Zampini B->ops->matsolve = NULL; 8144e4bbfaaSStefano Zampini B->ops->matsolvetranspose = NULL; 815087f3262SPaul Mullowney } else { 816087f3262SPaul Mullowney B->ops->solve = MatSolve_SeqAIJCUSPARSE; 817087f3262SPaul Mullowney B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE; 8184e4bbfaaSStefano Zampini B->ops->matsolve = NULL; 8194e4bbfaaSStefano Zampini B->ops->matsolvetranspose = NULL; 820087f3262SPaul Mullowney } 821087f3262SPaul Mullowney 822087f3262SPaul Mullowney /* get the triangular factors */ 8239566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEICCAnalysisAndCopyToGPU(B)); 8243ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 825087f3262SPaul Mullowney } 8269ae82921SPaul Mullowney 827d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(Mat A) 828d71ae5a4SJacob Faibussowitsch { 829bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors *)A->spptr; 830aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct *)cusparseTriFactors->loTriFactorPtr; 831aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct *)cusparseTriFactors->upTriFactorPtr; 832da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT; 833da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT; 834aa372e3fSPaul Mullowney cusparseIndexBase_t indexBase; 835aa372e3fSPaul Mullowney cusparseMatrixType_t matrixType; 836aa372e3fSPaul Mullowney cusparseFillMode_t fillMode; 837aa372e3fSPaul Mullowney cusparseDiagType_t diagType; 838b175d8bbSPaul Mullowney 839bda325fcSPaul Mullowney PetscFunctionBegin; 840aa372e3fSPaul Mullowney /* allocate space for the transpose of the lower triangular factor */ 8419566063dSJacob Faibussowitsch PetscCall(PetscNew(&loTriFactorT)); 842da79fbbcSStefano Zampini loTriFactorT->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 843aa372e3fSPaul Mullowney 844aa372e3fSPaul Mullowney /* set the matrix descriptors of the lower triangular factor */ 845aa372e3fSPaul Mullowney matrixType = cusparseGetMatType(loTriFactor->descr); 846aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(loTriFactor->descr); 8479371c9d4SSatish Balay fillMode = cusparseGetMatFillMode(loTriFactor->descr) == CUSPARSE_FILL_MODE_UPPER ? CUSPARSE_FILL_MODE_LOWER : CUSPARSE_FILL_MODE_UPPER; 848aa372e3fSPaul Mullowney diagType = cusparseGetMatDiagType(loTriFactor->descr); 849aa372e3fSPaul Mullowney 850aa372e3fSPaul Mullowney /* Create the matrix description */ 8519566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&loTriFactorT->descr)); 8529566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(loTriFactorT->descr, indexBase)); 8539566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(loTriFactorT->descr, matrixType)); 8549566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatFillMode(loTriFactorT->descr, fillMode)); 8559566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatDiagType(loTriFactorT->descr, diagType)); 856aa372e3fSPaul Mullowney 857aa372e3fSPaul Mullowney /* set the operation */ 858aa372e3fSPaul Mullowney loTriFactorT->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 859aa372e3fSPaul Mullowney 860aa372e3fSPaul Mullowney /* allocate GPU space for the CSC of the lower triangular factor*/ 861aa372e3fSPaul Mullowney loTriFactorT->csrMat = new CsrMatrix; 862afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows = loTriFactor->csrMat->num_cols; 863afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_cols = loTriFactor->csrMat->num_rows; 864aa372e3fSPaul Mullowney loTriFactorT->csrMat->num_entries = loTriFactor->csrMat->num_entries; 865afb2bd1cSJunchao Zhang loTriFactorT->csrMat->row_offsets = new THRUSTINTARRAY32(loTriFactorT->csrMat->num_rows + 1); 866afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices = new THRUSTINTARRAY32(loTriFactorT->csrMat->num_entries); 867afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values = new THRUSTARRAY(loTriFactorT->csrMat->num_entries); 868aa372e3fSPaul Mullowney 869aa372e3fSPaul Mullowney /* compute the transpose of the lower triangular factor, i.e. the CSC */ 870afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 8719371c9d4SSatish Balay PetscCallCUSPARSE(cusparseCsr2cscEx2_bufferSize(cusparseTriFactors->handle, loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_cols, loTriFactor->csrMat->num_entries, loTriFactor->csrMat->values->data().get(), 8729371c9d4SSatish Balay loTriFactor->csrMat->row_offsets->data().get(), loTriFactor->csrMat->column_indices->data().get(), loTriFactorT->csrMat->values->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), 8739371c9d4SSatish Balay loTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, CUSPARSE_ACTION_NUMERIC, indexBase, CUSPARSE_CSR2CSC_ALG1, &loTriFactor->csr2cscBufferSize)); 8749566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&loTriFactor->csr2cscBuffer, loTriFactor->csr2cscBufferSize)); 875afb2bd1cSJunchao Zhang #endif 876afb2bd1cSJunchao Zhang 8779566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose, A, 0, 0, 0)); 8789f7ba44dSJacob Faibussowitsch { 8799f7ba44dSJacob Faibussowitsch // there is no clean way to have PetscCallCUSPARSE wrapping this function... 8809f7ba44dSJacob Faibussowitsch auto stat = cusparse_csr2csc(cusparseTriFactors->handle, loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_cols, loTriFactor->csrMat->num_entries, loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 8819371c9d4SSatish Balay loTriFactor->csrMat->column_indices->data().get(), loTriFactorT->csrMat->values->data().get(), 882afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 8839f7ba44dSJacob Faibussowitsch loTriFactorT->csrMat->row_offsets->data().get(), loTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, CUSPARSE_ACTION_NUMERIC, indexBase, CUSPARSE_CSR2CSC_ALG1, loTriFactor->csr2cscBuffer); 884afb2bd1cSJunchao Zhang #else 8859f7ba44dSJacob Faibussowitsch loTriFactorT->csrMat->column_indices->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), CUSPARSE_ACTION_NUMERIC, indexBase); 886afb2bd1cSJunchao Zhang #endif 8879f7ba44dSJacob Faibussowitsch PetscCallCUSPARSE(stat); 8889f7ba44dSJacob Faibussowitsch } 8899f7ba44dSJacob Faibussowitsch 8909566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 8919566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose, A, 0, 0, 0)); 892aa372e3fSPaul Mullowney 893afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 8949566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSESolveAnalysis, A, 0, 0, 0)); 895261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseCreateCsrsvInfo(&loTriFactorT->solveInfo)); 8961b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9, 0, 0) 8979371c9d4SSatish Balay PetscCallCUSPARSE(cusparseXcsrsv_buffsize(cusparseTriFactors->handle, loTriFactorT->solveOp, loTriFactorT->csrMat->num_rows, loTriFactorT->csrMat->num_entries, loTriFactorT->descr, loTriFactorT->csrMat->values->data().get(), 8989371c9d4SSatish Balay loTriFactorT->csrMat->row_offsets->data().get(), loTriFactorT->csrMat->column_indices->data().get(), loTriFactorT->solveInfo, &loTriFactorT->solveBufferSize)); 8999566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&loTriFactorT->solveBuffer, loTriFactorT->solveBufferSize)); 900afb2bd1cSJunchao Zhang #endif 901afb2bd1cSJunchao Zhang 902afb2bd1cSJunchao Zhang /* perform the solve analysis */ 9039371c9d4SSatish Balay PetscCallCUSPARSE(cusparseXcsrsv_analysis(cusparseTriFactors->handle, loTriFactorT->solveOp, loTriFactorT->csrMat->num_rows, loTriFactorT->csrMat->num_entries, loTriFactorT->descr, loTriFactorT->csrMat->values->data().get(), 9049f7ba44dSJacob Faibussowitsch loTriFactorT->csrMat->row_offsets->data().get(), loTriFactorT->csrMat->column_indices->data().get(), loTriFactorT->solveInfo, loTriFactorT->solvePolicy, loTriFactorT->solveBuffer)); 9059f7ba44dSJacob Faibussowitsch 9069566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 9079566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSESolveAnalysis, A, 0, 0, 0)); 908aa372e3fSPaul Mullowney 909da79fbbcSStefano Zampini /* assign the pointer */ 910aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors *)A->spptr)->loTriFactorPtrTranspose = loTriFactorT; 911aa372e3fSPaul Mullowney 912aa372e3fSPaul Mullowney /*********************************************/ 913aa372e3fSPaul Mullowney /* Now the Transpose of the Upper Tri Factor */ 914aa372e3fSPaul Mullowney /*********************************************/ 915aa372e3fSPaul Mullowney 916aa372e3fSPaul Mullowney /* allocate space for the transpose of the upper triangular factor */ 9179566063dSJacob Faibussowitsch PetscCall(PetscNew(&upTriFactorT)); 918da79fbbcSStefano Zampini upTriFactorT->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 919aa372e3fSPaul Mullowney 920aa372e3fSPaul Mullowney /* set the matrix descriptors of the upper triangular factor */ 921aa372e3fSPaul Mullowney matrixType = cusparseGetMatType(upTriFactor->descr); 922aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(upTriFactor->descr); 9239371c9d4SSatish Balay fillMode = cusparseGetMatFillMode(upTriFactor->descr) == CUSPARSE_FILL_MODE_UPPER ? CUSPARSE_FILL_MODE_LOWER : CUSPARSE_FILL_MODE_UPPER; 924aa372e3fSPaul Mullowney diagType = cusparseGetMatDiagType(upTriFactor->descr); 925aa372e3fSPaul Mullowney 926aa372e3fSPaul Mullowney /* Create the matrix description */ 9279566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&upTriFactorT->descr)); 9289566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(upTriFactorT->descr, indexBase)); 9299566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(upTriFactorT->descr, matrixType)); 9309566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatFillMode(upTriFactorT->descr, fillMode)); 9319566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatDiagType(upTriFactorT->descr, diagType)); 932aa372e3fSPaul Mullowney 933aa372e3fSPaul Mullowney /* set the operation */ 934aa372e3fSPaul Mullowney upTriFactorT->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 935aa372e3fSPaul Mullowney 936aa372e3fSPaul Mullowney /* allocate GPU space for the CSC of the upper triangular factor*/ 937aa372e3fSPaul Mullowney upTriFactorT->csrMat = new CsrMatrix; 938afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows = upTriFactor->csrMat->num_cols; 939afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_cols = upTriFactor->csrMat->num_rows; 940aa372e3fSPaul Mullowney upTriFactorT->csrMat->num_entries = upTriFactor->csrMat->num_entries; 941afb2bd1cSJunchao Zhang upTriFactorT->csrMat->row_offsets = new THRUSTINTARRAY32(upTriFactorT->csrMat->num_rows + 1); 942afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices = new THRUSTINTARRAY32(upTriFactorT->csrMat->num_entries); 943afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values = new THRUSTARRAY(upTriFactorT->csrMat->num_entries); 944aa372e3fSPaul Mullowney 945aa372e3fSPaul Mullowney /* compute the transpose of the upper triangular factor, i.e. the CSC */ 946afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 9479371c9d4SSatish Balay PetscCallCUSPARSE(cusparseCsr2cscEx2_bufferSize(cusparseTriFactors->handle, upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_cols, upTriFactor->csrMat->num_entries, upTriFactor->csrMat->values->data().get(), 9489371c9d4SSatish Balay upTriFactor->csrMat->row_offsets->data().get(), upTriFactor->csrMat->column_indices->data().get(), upTriFactorT->csrMat->values->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), 9499371c9d4SSatish Balay upTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, CUSPARSE_ACTION_NUMERIC, indexBase, CUSPARSE_CSR2CSC_ALG1, &upTriFactor->csr2cscBufferSize)); 9509566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&upTriFactor->csr2cscBuffer, upTriFactor->csr2cscBufferSize)); 951afb2bd1cSJunchao Zhang #endif 952afb2bd1cSJunchao Zhang 9539566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose, A, 0, 0, 0)); 9549f7ba44dSJacob Faibussowitsch { 9559f7ba44dSJacob Faibussowitsch // there is no clean way to have PetscCallCUSPARSE wrapping this function... 9569f7ba44dSJacob Faibussowitsch auto stat = cusparse_csr2csc(cusparseTriFactors->handle, upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_cols, upTriFactor->csrMat->num_entries, upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 9579371c9d4SSatish Balay upTriFactor->csrMat->column_indices->data().get(), upTriFactorT->csrMat->values->data().get(), 958afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 9599f7ba44dSJacob Faibussowitsch upTriFactorT->csrMat->row_offsets->data().get(), upTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, CUSPARSE_ACTION_NUMERIC, indexBase, CUSPARSE_CSR2CSC_ALG1, upTriFactor->csr2cscBuffer); 960afb2bd1cSJunchao Zhang #else 9619f7ba44dSJacob Faibussowitsch upTriFactorT->csrMat->column_indices->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), CUSPARSE_ACTION_NUMERIC, indexBase); 962afb2bd1cSJunchao Zhang #endif 9639f7ba44dSJacob Faibussowitsch PetscCallCUSPARSE(stat); 9649f7ba44dSJacob Faibussowitsch } 965d49cd2b7SBarry Smith 9669566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 9679566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose, A, 0, 0, 0)); 968aa372e3fSPaul Mullowney 969afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 9709566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSESolveAnalysis, A, 0, 0, 0)); 971261a78b4SJunchao Zhang PetscCallCUSPARSE(cusparseCreateCsrsvInfo(&upTriFactorT->solveInfo)); 9721b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9, 0, 0) 9739371c9d4SSatish Balay PetscCallCUSPARSE(cusparseXcsrsv_buffsize(cusparseTriFactors->handle, upTriFactorT->solveOp, upTriFactorT->csrMat->num_rows, upTriFactorT->csrMat->num_entries, upTriFactorT->descr, upTriFactorT->csrMat->values->data().get(), 9749371c9d4SSatish Balay upTriFactorT->csrMat->row_offsets->data().get(), upTriFactorT->csrMat->column_indices->data().get(), upTriFactorT->solveInfo, &upTriFactorT->solveBufferSize)); 9759566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&upTriFactorT->solveBuffer, upTriFactorT->solveBufferSize)); 976afb2bd1cSJunchao Zhang #endif 977afb2bd1cSJunchao Zhang 978afb2bd1cSJunchao Zhang /* perform the solve analysis */ 9795f80ce2aSJacob Faibussowitsch /* christ, would it have killed you to put this stuff in a function????????? */ 9809371c9d4SSatish Balay PetscCallCUSPARSE(cusparseXcsrsv_analysis(cusparseTriFactors->handle, upTriFactorT->solveOp, upTriFactorT->csrMat->num_rows, upTriFactorT->csrMat->num_entries, upTriFactorT->descr, upTriFactorT->csrMat->values->data().get(), 9819f7ba44dSJacob Faibussowitsch upTriFactorT->csrMat->row_offsets->data().get(), upTriFactorT->csrMat->column_indices->data().get(), upTriFactorT->solveInfo, upTriFactorT->solvePolicy, upTriFactorT->solveBuffer)); 982d49cd2b7SBarry Smith 9839566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 9849566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSESolveAnalysis, A, 0, 0, 0)); 985aa372e3fSPaul Mullowney 986da79fbbcSStefano Zampini /* assign the pointer */ 987aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors *)A->spptr)->upTriFactorPtrTranspose = upTriFactorT; 9883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 989bda325fcSPaul Mullowney } 990bda325fcSPaul Mullowney 9919371c9d4SSatish Balay struct PetscScalarToPetscInt { 9929371c9d4SSatish Balay __host__ __device__ PetscInt operator()(PetscScalar s) { return (PetscInt)PetscRealPart(s); } 993a49f1ed0SStefano Zampini }; 994a49f1ed0SStefano Zampini 995d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJCUSPARSEFormExplicitTranspose(Mat A) 996d71ae5a4SJacob Faibussowitsch { 997aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE *)A->spptr; 998a49f1ed0SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *matstruct, *matstructT; 999bda325fcSPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 1000bda325fcSPaul Mullowney cusparseStatus_t stat; 1001aa372e3fSPaul Mullowney cusparseIndexBase_t indexBase; 1002b175d8bbSPaul Mullowney 1003bda325fcSPaul Mullowney PetscFunctionBegin; 10049566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 1005a49f1ed0SStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct *)cusparsestruct->mat; 100628b400f6SJacob Faibussowitsch PetscCheck(matstruct, PETSC_COMM_SELF, PETSC_ERR_GPU, "Missing mat struct"); 1007a49f1ed0SStefano Zampini matstructT = (Mat_SeqAIJCUSPARSEMultStruct *)cusparsestruct->matTranspose; 100808401ef6SPierre Jolivet PetscCheck(!A->transupdated || matstructT, PETSC_COMM_SELF, PETSC_ERR_GPU, "Missing matTranspose struct"); 10093ba16761SJacob Faibussowitsch if (A->transupdated) PetscFunctionReturn(PETSC_SUCCESS); 10109566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose, A, 0, 0, 0)); 10119566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 101248a46eb9SPierre Jolivet if (cusparsestruct->format != MAT_CUSPARSE_CSR) PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(A, PETSC_TRUE)); 1013a49f1ed0SStefano Zampini if (!cusparsestruct->matTranspose) { /* create cusparse matrix */ 1014aa372e3fSPaul Mullowney matstructT = new Mat_SeqAIJCUSPARSEMultStruct; 10159566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&matstructT->descr)); 1016aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(matstruct->descr); 10179566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(matstructT->descr, indexBase)); 10189566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(matstructT->descr, CUSPARSE_MATRIX_TYPE_GENERAL)); 1019aa372e3fSPaul Mullowney 1020b06137fdSPaul Mullowney /* set alpha and beta */ 10219566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(matstructT->alpha_one), sizeof(PetscScalar))); 10229566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(matstructT->beta_zero), sizeof(PetscScalar))); 10239566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(matstructT->beta_one), sizeof(PetscScalar))); 10249566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(matstructT->alpha_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar), cudaMemcpyHostToDevice)); 10259566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(matstructT->beta_zero, &PETSC_CUSPARSE_ZERO, sizeof(PetscScalar), cudaMemcpyHostToDevice)); 10269566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(matstructT->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar), cudaMemcpyHostToDevice)); 1027b06137fdSPaul Mullowney 1028aa372e3fSPaul Mullowney if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 1029aa372e3fSPaul Mullowney CsrMatrix *matrixT = new CsrMatrix; 1030a49f1ed0SStefano Zampini matstructT->mat = matrixT; 1031554b8892SKarl Rupp matrixT->num_rows = A->cmap->n; 1032554b8892SKarl Rupp matrixT->num_cols = A->rmap->n; 1033aa372e3fSPaul Mullowney matrixT->num_entries = a->nz; 1034a8bd5306SMark Adams matrixT->row_offsets = new THRUSTINTARRAY32(matrixT->num_rows + 1); 1035aa372e3fSPaul Mullowney matrixT->column_indices = new THRUSTINTARRAY32(a->nz); 1036aa372e3fSPaul Mullowney matrixT->values = new THRUSTARRAY(a->nz); 1037a3fdcf43SKarl Rupp 1038ad540459SPierre Jolivet if (!cusparsestruct->rowoffsets_gpu) cusparsestruct->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n + 1); 103981902715SJunchao Zhang cusparsestruct->rowoffsets_gpu->assign(a->i, a->i + A->rmap->n + 1); 1040afb2bd1cSJunchao Zhang 1041afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 10423606e59fSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 2, 1) 10439371c9d4SSatish Balay stat = cusparseCreateCsr(&matstructT->matDescr, matrixT->num_rows, matrixT->num_cols, matrixT->num_entries, matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), matrixT->values->data().get(), CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, /* row offset, col idx type due to THRUSTINTARRAY32 */ 10449371c9d4SSatish Balay indexBase, cusparse_scalartype); 10459371c9d4SSatish Balay PetscCallCUSPARSE(stat); 10463606e59fSJunchao Zhang #else 10473606e59fSJunchao Zhang /* cusparse-11.x returns errors with zero-sized matrices until 11.2.1, 10483606e59fSJunchao Zhang see https://docs.nvidia.com/cuda/cuda-toolkit-release-notes/index.html#cusparse-11.2.1 10493606e59fSJunchao Zhang 10503606e59fSJunchao Zhang I don't know what a proper value should be for matstructT->matDescr with empty matrices, so I just set 10513606e59fSJunchao Zhang it to NULL to blow it up if one relies on it. Per https://docs.nvidia.com/cuda/cusparse/index.html#csr2cscEx2, 10523606e59fSJunchao Zhang when nnz = 0, matrixT->row_offsets[] should be filled with indexBase. So I also set it accordingly. 10533606e59fSJunchao Zhang */ 10543606e59fSJunchao Zhang if (matrixT->num_entries) { 10559371c9d4SSatish Balay stat = cusparseCreateCsr(&matstructT->matDescr, matrixT->num_rows, matrixT->num_cols, matrixT->num_entries, matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), matrixT->values->data().get(), CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, indexBase, cusparse_scalartype); 10569371c9d4SSatish Balay PetscCallCUSPARSE(stat); 10573606e59fSJunchao Zhang 10583606e59fSJunchao Zhang } else { 10593606e59fSJunchao Zhang matstructT->matDescr = NULL; 10603606e59fSJunchao Zhang matrixT->row_offsets->assign(matrixT->row_offsets->size(), indexBase); 10613606e59fSJunchao Zhang } 10623606e59fSJunchao Zhang #endif 1063afb2bd1cSJunchao Zhang #endif 1064aa372e3fSPaul Mullowney } else if (cusparsestruct->format == MAT_CUSPARSE_ELL || cusparsestruct->format == MAT_CUSPARSE_HYB) { 1065afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 1066afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 1067afb2bd1cSJunchao Zhang #else 1068aa372e3fSPaul Mullowney CsrMatrix *temp = new CsrMatrix; 106951c6d536SStefano Zampini CsrMatrix *tempT = new CsrMatrix; 107051c6d536SStefano Zampini /* First convert HYB to CSR */ 1071aa372e3fSPaul Mullowney temp->num_rows = A->rmap->n; 1072aa372e3fSPaul Mullowney temp->num_cols = A->cmap->n; 1073aa372e3fSPaul Mullowney temp->num_entries = a->nz; 1074aa372e3fSPaul Mullowney temp->row_offsets = new THRUSTINTARRAY32(A->rmap->n + 1); 1075aa372e3fSPaul Mullowney temp->column_indices = new THRUSTINTARRAY32(a->nz); 1076aa372e3fSPaul Mullowney temp->values = new THRUSTARRAY(a->nz); 1077aa372e3fSPaul Mullowney 10789371c9d4SSatish Balay stat = cusparse_hyb2csr(cusparsestruct->handle, matstruct->descr, (cusparseHybMat_t)matstruct->mat, temp->values->data().get(), temp->row_offsets->data().get(), temp->column_indices->data().get()); 10799371c9d4SSatish Balay PetscCallCUSPARSE(stat); 1080aa372e3fSPaul Mullowney 1081aa372e3fSPaul Mullowney /* Next, convert CSR to CSC (i.e. the matrix transpose) */ 1082aa372e3fSPaul Mullowney tempT->num_rows = A->rmap->n; 1083aa372e3fSPaul Mullowney tempT->num_cols = A->cmap->n; 1084aa372e3fSPaul Mullowney tempT->num_entries = a->nz; 1085aa372e3fSPaul Mullowney tempT->row_offsets = new THRUSTINTARRAY32(A->rmap->n + 1); 1086aa372e3fSPaul Mullowney tempT->column_indices = new THRUSTINTARRAY32(a->nz); 1087aa372e3fSPaul Mullowney tempT->values = new THRUSTARRAY(a->nz); 1088aa372e3fSPaul Mullowney 10899371c9d4SSatish Balay stat = cusparse_csr2csc(cusparsestruct->handle, temp->num_rows, temp->num_cols, temp->num_entries, temp->values->data().get(), temp->row_offsets->data().get(), temp->column_indices->data().get(), tempT->values->data().get(), 10909371c9d4SSatish Balay tempT->column_indices->data().get(), tempT->row_offsets->data().get(), CUSPARSE_ACTION_NUMERIC, indexBase); 10919371c9d4SSatish Balay PetscCallCUSPARSE(stat); 1092aa372e3fSPaul Mullowney 1093aa372e3fSPaul Mullowney /* Last, convert CSC to HYB */ 1094aa372e3fSPaul Mullowney cusparseHybMat_t hybMat; 10959566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateHybMat(&hybMat)); 10969371c9d4SSatish Balay cusparseHybPartition_t partition = cusparsestruct->format == MAT_CUSPARSE_ELL ? CUSPARSE_HYB_PARTITION_MAX : CUSPARSE_HYB_PARTITION_AUTO; 10979371c9d4SSatish Balay stat = cusparse_csr2hyb(cusparsestruct->handle, A->rmap->n, A->cmap->n, matstructT->descr, tempT->values->data().get(), tempT->row_offsets->data().get(), tempT->column_indices->data().get(), hybMat, 0, partition); 10989371c9d4SSatish Balay PetscCallCUSPARSE(stat); 1099aa372e3fSPaul Mullowney 1100aa372e3fSPaul Mullowney /* assign the pointer */ 1101aa372e3fSPaul Mullowney matstructT->mat = hybMat; 11021a2c6b5cSJunchao Zhang A->transupdated = PETSC_TRUE; 1103aa372e3fSPaul Mullowney /* delete temporaries */ 1104aa372e3fSPaul Mullowney if (tempT) { 1105aa372e3fSPaul Mullowney if (tempT->values) delete (THRUSTARRAY *)tempT->values; 1106aa372e3fSPaul Mullowney if (tempT->column_indices) delete (THRUSTINTARRAY32 *)tempT->column_indices; 1107aa372e3fSPaul Mullowney if (tempT->row_offsets) delete (THRUSTINTARRAY32 *)tempT->row_offsets; 1108aa372e3fSPaul Mullowney delete (CsrMatrix *)tempT; 1109087f3262SPaul Mullowney } 1110aa372e3fSPaul Mullowney if (temp) { 1111aa372e3fSPaul Mullowney if (temp->values) delete (THRUSTARRAY *)temp->values; 1112aa372e3fSPaul Mullowney if (temp->column_indices) delete (THRUSTINTARRAY32 *)temp->column_indices; 1113aa372e3fSPaul Mullowney if (temp->row_offsets) delete (THRUSTINTARRAY32 *)temp->row_offsets; 1114aa372e3fSPaul Mullowney delete (CsrMatrix *)temp; 1115aa372e3fSPaul Mullowney } 1116afb2bd1cSJunchao Zhang #endif 1117aa372e3fSPaul Mullowney } 1118a49f1ed0SStefano Zampini } 1119a49f1ed0SStefano Zampini if (cusparsestruct->format == MAT_CUSPARSE_CSR) { /* transpose mat struct may be already present, update data */ 1120a49f1ed0SStefano Zampini CsrMatrix *matrix = (CsrMatrix *)matstruct->mat; 1121a49f1ed0SStefano Zampini CsrMatrix *matrixT = (CsrMatrix *)matstructT->mat; 112228b400f6SJacob Faibussowitsch PetscCheck(matrix, PETSC_COMM_SELF, PETSC_ERR_GPU, "Missing CsrMatrix"); 112328b400f6SJacob Faibussowitsch PetscCheck(matrix->row_offsets, PETSC_COMM_SELF, PETSC_ERR_GPU, "Missing CsrMatrix rows"); 112428b400f6SJacob Faibussowitsch PetscCheck(matrix->column_indices, PETSC_COMM_SELF, PETSC_ERR_GPU, "Missing CsrMatrix cols"); 112528b400f6SJacob Faibussowitsch PetscCheck(matrix->values, PETSC_COMM_SELF, PETSC_ERR_GPU, "Missing CsrMatrix values"); 112628b400f6SJacob Faibussowitsch PetscCheck(matrixT, PETSC_COMM_SELF, PETSC_ERR_GPU, "Missing CsrMatrixT"); 112728b400f6SJacob Faibussowitsch PetscCheck(matrixT->row_offsets, PETSC_COMM_SELF, PETSC_ERR_GPU, "Missing CsrMatrixT rows"); 112828b400f6SJacob Faibussowitsch PetscCheck(matrixT->column_indices, PETSC_COMM_SELF, PETSC_ERR_GPU, "Missing CsrMatrixT cols"); 112928b400f6SJacob Faibussowitsch PetscCheck(matrixT->values, PETSC_COMM_SELF, PETSC_ERR_GPU, "Missing CsrMatrixT values"); 1130a49f1ed0SStefano Zampini if (!cusparsestruct->rowoffsets_gpu) { /* this may be absent when we did not construct the transpose with csr2csc */ 1131a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n + 1); 1132a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu->assign(a->i, a->i + A->rmap->n + 1); 11339566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu((A->rmap->n + 1) * sizeof(PetscInt))); 1134a49f1ed0SStefano Zampini } 1135a49f1ed0SStefano Zampini if (!cusparsestruct->csr2csc_i) { 1136a49f1ed0SStefano Zampini THRUSTARRAY csr2csc_a(matrix->num_entries); 1137792fecdfSBarry Smith PetscCallThrust(thrust::sequence(thrust::device, csr2csc_a.begin(), csr2csc_a.end(), 0.0)); 1138a49f1ed0SStefano Zampini 1139a49f1ed0SStefano Zampini indexBase = cusparseGetMatIndexBase(matstruct->descr); 1140a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 1141a49f1ed0SStefano Zampini void *csr2cscBuffer; 1142a49f1ed0SStefano Zampini size_t csr2cscBufferSize; 11439371c9d4SSatish Balay stat = cusparseCsr2cscEx2_bufferSize(cusparsestruct->handle, A->rmap->n, A->cmap->n, matrix->num_entries, matrix->values->data().get(), cusparsestruct->rowoffsets_gpu->data().get(), matrix->column_indices->data().get(), matrixT->values->data().get(), 11449371c9d4SSatish Balay matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), cusparse_scalartype, CUSPARSE_ACTION_NUMERIC, indexBase, cusparsestruct->csr2cscAlg, &csr2cscBufferSize); 11459371c9d4SSatish Balay PetscCallCUSPARSE(stat); 11469566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&csr2cscBuffer, csr2cscBufferSize)); 1147a49f1ed0SStefano Zampini #endif 1148a49f1ed0SStefano Zampini 11491a2c6b5cSJunchao Zhang if (matrix->num_entries) { 11501a2c6b5cSJunchao Zhang /* When there are no nonzeros, this routine mistakenly returns CUSPARSE_STATUS_INVALID_VALUE in 11511a2c6b5cSJunchao Zhang mat_tests-ex62_15_mpiaijcusparse on ranks 0 and 2 with CUDA-11. But CUDA-10 is OK. 11521a2c6b5cSJunchao Zhang I checked every parameters and they were just fine. I have no clue why cusparse complains. 11531a2c6b5cSJunchao Zhang 11541a2c6b5cSJunchao Zhang Per https://docs.nvidia.com/cuda/cusparse/index.html#csr2cscEx2, when nnz = 0, matrixT->row_offsets[] 11551a2c6b5cSJunchao Zhang should be filled with indexBase. So I just take a shortcut here. 11561a2c6b5cSJunchao Zhang */ 11579371c9d4SSatish Balay stat = cusparse_csr2csc(cusparsestruct->handle, A->rmap->n, A->cmap->n, matrix->num_entries, csr2csc_a.data().get(), cusparsestruct->rowoffsets_gpu->data().get(), matrix->column_indices->data().get(), matrixT->values->data().get(), 1158a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 11599371c9d4SSatish Balay matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), cusparse_scalartype, CUSPARSE_ACTION_NUMERIC, indexBase, cusparsestruct->csr2cscAlg, csr2cscBuffer); 11609371c9d4SSatish Balay PetscCallCUSPARSE(stat); 1161a49f1ed0SStefano Zampini #else 11629371c9d4SSatish Balay matrixT->column_indices->data().get(), matrixT->row_offsets->data().get(), CUSPARSE_ACTION_NUMERIC, indexBase); 11639371c9d4SSatish Balay PetscCallCUSPARSE(stat); 1164a49f1ed0SStefano Zampini #endif 11651a2c6b5cSJunchao Zhang } else { 11661a2c6b5cSJunchao Zhang matrixT->row_offsets->assign(matrixT->row_offsets->size(), indexBase); 11671a2c6b5cSJunchao Zhang } 11681a2c6b5cSJunchao Zhang 1169a49f1ed0SStefano Zampini cusparsestruct->csr2csc_i = new THRUSTINTARRAY(matrix->num_entries); 1170792fecdfSBarry Smith PetscCallThrust(thrust::transform(thrust::device, matrixT->values->begin(), matrixT->values->end(), cusparsestruct->csr2csc_i->begin(), PetscScalarToPetscInt())); 1171a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 11729566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(csr2cscBuffer)); 1173a49f1ed0SStefano Zampini #endif 1174a49f1ed0SStefano Zampini } 11759371c9d4SSatish Balay PetscCallThrust( 11769371c9d4SSatish Balay thrust::copy(thrust::device, thrust::make_permutation_iterator(matrix->values->begin(), cusparsestruct->csr2csc_i->begin()), thrust::make_permutation_iterator(matrix->values->begin(), cusparsestruct->csr2csc_i->end()), matrixT->values->begin())); 1177a49f1ed0SStefano Zampini } 11789566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 11799566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSEGenerateTranspose, A, 0, 0, 0)); 1180213423ffSJunchao Zhang /* the compressed row indices is not used for matTranspose */ 1181213423ffSJunchao Zhang matstructT->cprowIndices = NULL; 1182aa372e3fSPaul Mullowney /* assign the pointer */ 1183aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSE *)A->spptr)->matTranspose = matstructT; 11841a2c6b5cSJunchao Zhang A->transupdated = PETSC_TRUE; 11853ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1186bda325fcSPaul Mullowney } 1187bda325fcSPaul Mullowney 1188a49f1ed0SStefano Zampini /* Why do we need to analyze the transposed matrix again? Can't we just use op(A) = CUSPARSE_OPERATION_TRANSPOSE in MatSolve_SeqAIJCUSPARSE? */ 1189d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE(Mat A, Vec bb, Vec xx) 1190d71ae5a4SJacob Faibussowitsch { 1191c41cb2e2SAlejandro Lamas Daviña PetscInt n = xx->map->n; 1192465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1193465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1194465f34aeSAlejandro Lamas Daviña thrust::device_ptr<const PetscScalar> bGPU; 1195465f34aeSAlejandro Lamas Daviña thrust::device_ptr<PetscScalar> xGPU; 1196bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors *)A->spptr; 1197aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct *)cusparseTriFactors->loTriFactorPtrTranspose; 1198aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct *)cusparseTriFactors->upTriFactorPtrTranspose; 1199aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY *)cusparseTriFactors->workVector; 1200bda325fcSPaul Mullowney 1201bda325fcSPaul Mullowney PetscFunctionBegin; 1202aa372e3fSPaul Mullowney /* Analyze the matrix and create the transpose ... on the fly */ 1203aa372e3fSPaul Mullowney if (!loTriFactorT && !upTriFactorT) { 12049566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(A)); 1205aa372e3fSPaul Mullowney loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct *)cusparseTriFactors->loTriFactorPtrTranspose; 1206aa372e3fSPaul Mullowney upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct *)cusparseTriFactors->upTriFactorPtrTranspose; 1207bda325fcSPaul Mullowney } 1208bda325fcSPaul Mullowney 1209bda325fcSPaul Mullowney /* Get the GPU pointers */ 12109566063dSJacob Faibussowitsch PetscCall(VecCUDAGetArrayWrite(xx, &xarray)); 12119566063dSJacob Faibussowitsch PetscCall(VecCUDAGetArrayRead(bb, &barray)); 1212c41cb2e2SAlejandro Lamas Daviña xGPU = thrust::device_pointer_cast(xarray); 1213c41cb2e2SAlejandro Lamas Daviña bGPU = thrust::device_pointer_cast(barray); 1214bda325fcSPaul Mullowney 12159566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 1216aa372e3fSPaul Mullowney /* First, reorder with the row permutation */ 12179371c9d4SSatish Balay thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream), thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->begin()), thrust::make_permutation_iterator(bGPU + n, cusparseTriFactors->rpermIndices->end()), xGPU); 1218aa372e3fSPaul Mullowney 1219aa372e3fSPaul Mullowney /* First, solve U */ 12209f7ba44dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseXcsrsv_solve(cusparseTriFactors->handle, upTriFactorT->solveOp, upTriFactorT->csrMat->num_rows, upTriFactorT->csrMat->num_entries, &PETSC_CUSPARSE_ONE, upTriFactorT->descr, upTriFactorT->csrMat->values->data().get(), 12219f7ba44dSJacob Faibussowitsch upTriFactorT->csrMat->row_offsets->data().get(), upTriFactorT->csrMat->column_indices->data().get(), upTriFactorT->solveInfo, xarray, tempGPU->data().get(), upTriFactorT->solvePolicy, upTriFactorT->solveBuffer)); 1222aa372e3fSPaul Mullowney 1223aa372e3fSPaul Mullowney /* Then, solve L */ 12249f7ba44dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseXcsrsv_solve(cusparseTriFactors->handle, loTriFactorT->solveOp, loTriFactorT->csrMat->num_rows, loTriFactorT->csrMat->num_entries, &PETSC_CUSPARSE_ONE, loTriFactorT->descr, loTriFactorT->csrMat->values->data().get(), 12259f7ba44dSJacob Faibussowitsch loTriFactorT->csrMat->row_offsets->data().get(), loTriFactorT->csrMat->column_indices->data().get(), loTriFactorT->solveInfo, tempGPU->data().get(), xarray, loTriFactorT->solvePolicy, loTriFactorT->solveBuffer)); 1226aa372e3fSPaul Mullowney 1227aa372e3fSPaul Mullowney /* Last, copy the solution, xGPU, into a temporary with the column permutation ... can't be done in place. */ 12289371c9d4SSatish Balay thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream), thrust::make_permutation_iterator(xGPU, cusparseTriFactors->cpermIndices->begin()), thrust::make_permutation_iterator(xGPU + n, cusparseTriFactors->cpermIndices->end()), tempGPU->begin()); 1229aa372e3fSPaul Mullowney 1230aa372e3fSPaul Mullowney /* Copy the temporary to the full solution. */ 1231a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream), tempGPU->begin(), tempGPU->end(), xGPU); 1232bda325fcSPaul Mullowney 1233bda325fcSPaul Mullowney /* restore */ 12349566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayRead(bb, &barray)); 12359566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayWrite(xx, &xarray)); 12369566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 12379566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0 * cusparseTriFactors->nnz - A->cmap->n)); 12383ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1239bda325fcSPaul Mullowney } 1240bda325fcSPaul Mullowney 1241d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering(Mat A, Vec bb, Vec xx) 1242d71ae5a4SJacob Faibussowitsch { 1243465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1244465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1245bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors *)A->spptr; 1246aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct *)cusparseTriFactors->loTriFactorPtrTranspose; 1247aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct *)cusparseTriFactors->upTriFactorPtrTranspose; 1248aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY *)cusparseTriFactors->workVector; 1249bda325fcSPaul Mullowney 1250bda325fcSPaul Mullowney PetscFunctionBegin; 1251aa372e3fSPaul Mullowney /* Analyze the matrix and create the transpose ... on the fly */ 1252aa372e3fSPaul Mullowney if (!loTriFactorT && !upTriFactorT) { 12539566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(A)); 1254aa372e3fSPaul Mullowney loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct *)cusparseTriFactors->loTriFactorPtrTranspose; 1255aa372e3fSPaul Mullowney upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct *)cusparseTriFactors->upTriFactorPtrTranspose; 1256bda325fcSPaul Mullowney } 1257bda325fcSPaul Mullowney 1258bda325fcSPaul Mullowney /* Get the GPU pointers */ 12599566063dSJacob Faibussowitsch PetscCall(VecCUDAGetArrayWrite(xx, &xarray)); 12609566063dSJacob Faibussowitsch PetscCall(VecCUDAGetArrayRead(bb, &barray)); 1261bda325fcSPaul Mullowney 12629566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 1263aa372e3fSPaul Mullowney /* First, solve U */ 12649f7ba44dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseXcsrsv_solve(cusparseTriFactors->handle, upTriFactorT->solveOp, upTriFactorT->csrMat->num_rows, upTriFactorT->csrMat->num_entries, &PETSC_CUSPARSE_ONE, upTriFactorT->descr, upTriFactorT->csrMat->values->data().get(), 12659f7ba44dSJacob Faibussowitsch upTriFactorT->csrMat->row_offsets->data().get(), upTriFactorT->csrMat->column_indices->data().get(), upTriFactorT->solveInfo, barray, tempGPU->data().get(), upTriFactorT->solvePolicy, upTriFactorT->solveBuffer)); 1266aa372e3fSPaul Mullowney 1267aa372e3fSPaul Mullowney /* Then, solve L */ 12689f7ba44dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseXcsrsv_solve(cusparseTriFactors->handle, loTriFactorT->solveOp, loTriFactorT->csrMat->num_rows, loTriFactorT->csrMat->num_entries, &PETSC_CUSPARSE_ONE, loTriFactorT->descr, loTriFactorT->csrMat->values->data().get(), 12699f7ba44dSJacob Faibussowitsch loTriFactorT->csrMat->row_offsets->data().get(), loTriFactorT->csrMat->column_indices->data().get(), loTriFactorT->solveInfo, tempGPU->data().get(), xarray, loTriFactorT->solvePolicy, loTriFactorT->solveBuffer)); 1270bda325fcSPaul Mullowney 1271bda325fcSPaul Mullowney /* restore */ 12729566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayRead(bb, &barray)); 12739566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayWrite(xx, &xarray)); 12749566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 12759566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0 * cusparseTriFactors->nnz - A->cmap->n)); 12763ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1277bda325fcSPaul Mullowney } 1278bda325fcSPaul Mullowney 1279d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSolve_SeqAIJCUSPARSE(Mat A, Vec bb, Vec xx) 1280d71ae5a4SJacob Faibussowitsch { 1281465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1282465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1283465f34aeSAlejandro Lamas Daviña thrust::device_ptr<const PetscScalar> bGPU; 1284465f34aeSAlejandro Lamas Daviña thrust::device_ptr<PetscScalar> xGPU; 12859ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors *)A->spptr; 1286aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct *)cusparseTriFactors->loTriFactorPtr; 1287aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct *)cusparseTriFactors->upTriFactorPtr; 1288aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY *)cusparseTriFactors->workVector; 12899ae82921SPaul Mullowney 12909ae82921SPaul Mullowney PetscFunctionBegin; 1291e057df02SPaul Mullowney /* Get the GPU pointers */ 12929566063dSJacob Faibussowitsch PetscCall(VecCUDAGetArrayWrite(xx, &xarray)); 12939566063dSJacob Faibussowitsch PetscCall(VecCUDAGetArrayRead(bb, &barray)); 1294c41cb2e2SAlejandro Lamas Daviña xGPU = thrust::device_pointer_cast(xarray); 1295c41cb2e2SAlejandro Lamas Daviña bGPU = thrust::device_pointer_cast(barray); 12969ae82921SPaul Mullowney 12979566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 1298aa372e3fSPaul Mullowney /* First, reorder with the row permutation */ 12999371c9d4SSatish Balay thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream), thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->begin()), thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->end()), tempGPU->begin()); 1300aa372e3fSPaul Mullowney 1301aa372e3fSPaul Mullowney /* Next, solve L */ 13029f7ba44dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseXcsrsv_solve(cusparseTriFactors->handle, loTriFactor->solveOp, loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, &PETSC_CUSPARSE_ONE, loTriFactor->descr, loTriFactor->csrMat->values->data().get(), 13039f7ba44dSJacob Faibussowitsch loTriFactor->csrMat->row_offsets->data().get(), loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo, tempGPU->data().get(), xarray, loTriFactor->solvePolicy, loTriFactor->solveBuffer)); 1304aa372e3fSPaul Mullowney 1305aa372e3fSPaul Mullowney /* Then, solve U */ 13069f7ba44dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseXcsrsv_solve(cusparseTriFactors->handle, upTriFactor->solveOp, upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, &PETSC_CUSPARSE_ONE, upTriFactor->descr, upTriFactor->csrMat->values->data().get(), 13079f7ba44dSJacob Faibussowitsch upTriFactor->csrMat->row_offsets->data().get(), upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo, xarray, tempGPU->data().get(), upTriFactor->solvePolicy, upTriFactor->solveBuffer)); 1308d49cd2b7SBarry Smith 13094e4bbfaaSStefano Zampini /* Last, reorder with the column permutation */ 13109371c9d4SSatish Balay thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream), thrust::make_permutation_iterator(tempGPU->begin(), cusparseTriFactors->cpermIndices->begin()), thrust::make_permutation_iterator(tempGPU->begin(), cusparseTriFactors->cpermIndices->end()), xGPU); 13119ae82921SPaul Mullowney 13129566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayRead(bb, &barray)); 13139566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayWrite(xx, &xarray)); 13149566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 13159566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0 * cusparseTriFactors->nnz - A->cmap->n)); 13163ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 13179ae82921SPaul Mullowney } 13189ae82921SPaul Mullowney 1319d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSolve_SeqAIJCUSPARSE_NaturalOrdering(Mat A, Vec bb, Vec xx) 1320d71ae5a4SJacob Faibussowitsch { 1321465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1322465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 13239ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors *)A->spptr; 1324aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct *)cusparseTriFactors->loTriFactorPtr; 1325aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct *)cusparseTriFactors->upTriFactorPtr; 1326aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY *)cusparseTriFactors->workVector; 13279ae82921SPaul Mullowney 13289ae82921SPaul Mullowney PetscFunctionBegin; 1329e057df02SPaul Mullowney /* Get the GPU pointers */ 13309566063dSJacob Faibussowitsch PetscCall(VecCUDAGetArrayWrite(xx, &xarray)); 13319566063dSJacob Faibussowitsch PetscCall(VecCUDAGetArrayRead(bb, &barray)); 13329ae82921SPaul Mullowney 13339566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 1334aa372e3fSPaul Mullowney /* First, solve L */ 13359f7ba44dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseXcsrsv_solve(cusparseTriFactors->handle, loTriFactor->solveOp, loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, &PETSC_CUSPARSE_ONE, loTriFactor->descr, loTriFactor->csrMat->values->data().get(), 13369f7ba44dSJacob Faibussowitsch loTriFactor->csrMat->row_offsets->data().get(), loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo, barray, tempGPU->data().get(), loTriFactor->solvePolicy, loTriFactor->solveBuffer)); 1337d49cd2b7SBarry Smith 1338aa372e3fSPaul Mullowney /* Next, solve U */ 13399f7ba44dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseXcsrsv_solve(cusparseTriFactors->handle, upTriFactor->solveOp, upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, &PETSC_CUSPARSE_ONE, upTriFactor->descr, upTriFactor->csrMat->values->data().get(), 13409f7ba44dSJacob Faibussowitsch upTriFactor->csrMat->row_offsets->data().get(), upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo, tempGPU->data().get(), xarray, upTriFactor->solvePolicy, upTriFactor->solveBuffer)); 13419ae82921SPaul Mullowney 13429566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayRead(bb, &barray)); 13439566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayWrite(xx, &xarray)); 13449566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 13459566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0 * cusparseTriFactors->nnz - A->cmap->n)); 13463ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 13479ae82921SPaul Mullowney } 13489ae82921SPaul Mullowney 1349da112707SJunchao Zhang #if CUSPARSE_VERSION >= 11500 1350da112707SJunchao Zhang /* cusparseSpSV_solve() and friends first appeared in cusparse-11.3 */ 1351d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSolve_SeqAIJCUSPARSE_ILU0(Mat fact, Vec b, Vec x) 1352d71ae5a4SJacob Faibussowitsch { 1353da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *fs = (Mat_SeqAIJCUSPARSETriFactors *)fact->spptr; 1354da112707SJunchao Zhang Mat_SeqAIJ *aij = (Mat_SeqAIJ *)fact->data; 1355da112707SJunchao Zhang const PetscScalar *barray; 1356da112707SJunchao Zhang PetscScalar *xarray; 1357da112707SJunchao Zhang 1358da112707SJunchao Zhang PetscFunctionBegin; 1359da112707SJunchao Zhang PetscCall(VecCUDAGetArrayWrite(x, &xarray)); 1360da112707SJunchao Zhang PetscCall(VecCUDAGetArrayRead(b, &barray)); 1361da112707SJunchao Zhang PetscCall(PetscLogGpuTimeBegin()); 1362da112707SJunchao Zhang 1363da112707SJunchao Zhang /* Solve L*y = b */ 1364da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDnVecSetValues(fs->dnVecDescr_X, (void *)barray)); 1365da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDnVecSetValues(fs->dnVecDescr_Y, fs->Y)); 13669371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpSV_solve(fs->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, &PETSC_CUSPARSE_ONE, fs->spMatDescr_L, /* L Y = X */ 13679371c9d4SSatish Balay fs->dnVecDescr_X, fs->dnVecDescr_Y, cusparse_scalartype, CUSPARSE_SPSV_ALG_DEFAULT, 136812ba2bc6SJunchao Zhang fs->spsvDescr_L)); // cusparseSpSV_solve() scretely uses the external buffer used in cusparseSpSV_analysis()! 1369da112707SJunchao Zhang 1370da112707SJunchao Zhang /* Solve U*x = y */ 1371da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDnVecSetValues(fs->dnVecDescr_X, xarray)); 13729371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpSV_solve(fs->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, &PETSC_CUSPARSE_ONE, fs->spMatDescr_U, /* U X = Y */ 13739371c9d4SSatish Balay fs->dnVecDescr_Y, fs->dnVecDescr_X, cusparse_scalartype, CUSPARSE_SPSV_ALG_DEFAULT, fs->spsvDescr_U)); 1374da112707SJunchao Zhang 1375da112707SJunchao Zhang PetscCall(VecCUDARestoreArrayRead(b, &barray)); 1376da112707SJunchao Zhang PetscCall(VecCUDARestoreArrayWrite(x, &xarray)); 1377da112707SJunchao Zhang 1378da112707SJunchao Zhang PetscCall(PetscLogGpuTimeEnd()); 1379da112707SJunchao Zhang PetscCall(PetscLogGpuFlops(2.0 * aij->nz - fact->rmap->n)); 13803ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1381da112707SJunchao Zhang } 1382da112707SJunchao Zhang 1383d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE_ILU0(Mat fact, Vec b, Vec x) 1384d71ae5a4SJacob Faibussowitsch { 1385da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *fs = (Mat_SeqAIJCUSPARSETriFactors *)fact->spptr; 1386da112707SJunchao Zhang Mat_SeqAIJ *aij = (Mat_SeqAIJ *)fact->data; 1387da112707SJunchao Zhang const PetscScalar *barray; 1388da112707SJunchao Zhang PetscScalar *xarray; 1389da112707SJunchao Zhang 1390da112707SJunchao Zhang PetscFunctionBegin; 139112ba2bc6SJunchao Zhang if (!fs->createdTransposeSpSVDescr) { /* Call MatSolveTranspose() for the first time */ 1392da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_createDescr(&fs->spsvDescr_Lt)); 139335cb6cd3SPierre Jolivet PetscCallCUSPARSE(cusparseSpSV_bufferSize(fs->handle, CUSPARSE_OPERATION_TRANSPOSE, &PETSC_CUSPARSE_ONE, fs->spMatDescr_L, /* The matrix is still L. We only do transpose solve with it */ 13949371c9d4SSatish Balay fs->dnVecDescr_X, fs->dnVecDescr_Y, cusparse_scalartype, CUSPARSE_SPSV_ALG_DEFAULT, fs->spsvDescr_Lt, &fs->spsvBufferSize_Lt)); 1395da112707SJunchao Zhang 1396da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_createDescr(&fs->spsvDescr_Ut)); 13979371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpSV_bufferSize(fs->handle, CUSPARSE_OPERATION_TRANSPOSE, &PETSC_CUSPARSE_ONE, fs->spMatDescr_U, fs->dnVecDescr_X, fs->dnVecDescr_Y, cusparse_scalartype, CUSPARSE_SPSV_ALG_DEFAULT, fs->spsvDescr_Ut, &fs->spsvBufferSize_Ut)); 1398da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->spsvBuffer_Lt, fs->spsvBufferSize_Lt)); 139912ba2bc6SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->spsvBuffer_Ut, fs->spsvBufferSize_Ut)); 140012ba2bc6SJunchao Zhang fs->createdTransposeSpSVDescr = PETSC_TRUE; 140112ba2bc6SJunchao Zhang } 1402da112707SJunchao Zhang 140312ba2bc6SJunchao Zhang if (!fs->updatedTransposeSpSVAnalysis) { 14049371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpSV_analysis(fs->handle, CUSPARSE_OPERATION_TRANSPOSE, &PETSC_CUSPARSE_ONE, fs->spMatDescr_L, fs->dnVecDescr_X, fs->dnVecDescr_Y, cusparse_scalartype, CUSPARSE_SPSV_ALG_DEFAULT, fs->spsvDescr_Lt, fs->spsvBuffer_Lt)); 1405da112707SJunchao Zhang 14069371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpSV_analysis(fs->handle, CUSPARSE_OPERATION_TRANSPOSE, &PETSC_CUSPARSE_ONE, fs->spMatDescr_U, fs->dnVecDescr_X, fs->dnVecDescr_Y, cusparse_scalartype, CUSPARSE_SPSV_ALG_DEFAULT, fs->spsvDescr_Ut, fs->spsvBuffer_Ut)); 140712ba2bc6SJunchao Zhang fs->updatedTransposeSpSVAnalysis = PETSC_TRUE; 1408da112707SJunchao Zhang } 1409da112707SJunchao Zhang 1410da112707SJunchao Zhang PetscCall(VecCUDAGetArrayWrite(x, &xarray)); 1411da112707SJunchao Zhang PetscCall(VecCUDAGetArrayRead(b, &barray)); 1412da112707SJunchao Zhang PetscCall(PetscLogGpuTimeBegin()); 1413da112707SJunchao Zhang 1414da112707SJunchao Zhang /* Solve Ut*y = b */ 1415da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDnVecSetValues(fs->dnVecDescr_X, (void *)barray)); 1416da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDnVecSetValues(fs->dnVecDescr_Y, fs->Y)); 14179371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpSV_solve(fs->handle, CUSPARSE_OPERATION_TRANSPOSE, &PETSC_CUSPARSE_ONE, fs->spMatDescr_U, /* Ut Y = X */ 14189371c9d4SSatish Balay fs->dnVecDescr_X, fs->dnVecDescr_Y, cusparse_scalartype, CUSPARSE_SPSV_ALG_DEFAULT, fs->spsvDescr_Ut)); 1419da112707SJunchao Zhang 1420da112707SJunchao Zhang /* Solve Lt*x = y */ 1421da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDnVecSetValues(fs->dnVecDescr_X, xarray)); 14229371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpSV_solve(fs->handle, CUSPARSE_OPERATION_TRANSPOSE, &PETSC_CUSPARSE_ONE, fs->spMatDescr_L, /* Lt X = Y */ 14239371c9d4SSatish Balay fs->dnVecDescr_Y, fs->dnVecDescr_X, cusparse_scalartype, CUSPARSE_SPSV_ALG_DEFAULT, fs->spsvDescr_Lt)); 1424da112707SJunchao Zhang 1425da112707SJunchao Zhang PetscCall(VecCUDARestoreArrayRead(b, &barray)); 1426da112707SJunchao Zhang PetscCall(VecCUDARestoreArrayWrite(x, &xarray)); 1427da112707SJunchao Zhang PetscCall(PetscLogGpuTimeEnd()); 1428da112707SJunchao Zhang PetscCall(PetscLogGpuFlops(2.0 * aij->nz - fact->rmap->n)); 14293ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1430da112707SJunchao Zhang } 1431da112707SJunchao Zhang 14328eb1d50fSPierre Jolivet static PetscErrorCode MatILUFactorNumeric_SeqAIJCUSPARSE_ILU0(Mat fact, Mat A, const MatFactorInfo *) 1433d71ae5a4SJacob Faibussowitsch { 1434da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *fs = (Mat_SeqAIJCUSPARSETriFactors *)fact->spptr; 1435da112707SJunchao Zhang Mat_SeqAIJ *aij = (Mat_SeqAIJ *)fact->data; 1436da112707SJunchao Zhang Mat_SeqAIJCUSPARSE *Acusp = (Mat_SeqAIJCUSPARSE *)A->spptr; 1437da112707SJunchao Zhang CsrMatrix *Acsr; 1438da112707SJunchao Zhang PetscInt m, nz; 1439da112707SJunchao Zhang PetscBool flg; 1440da112707SJunchao Zhang 1441da112707SJunchao Zhang PetscFunctionBegin; 1442da112707SJunchao Zhang if (PetscDefined(USE_DEBUG)) { 1443da112707SJunchao Zhang PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQAIJCUSPARSE, &flg)); 1444da112707SJunchao Zhang PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_GPU, "Expected MATSEQAIJCUSPARSE, but input is %s", ((PetscObject)A)->type_name); 1445da112707SJunchao Zhang } 1446da112707SJunchao Zhang 1447da112707SJunchao Zhang /* Copy A's value to fact */ 1448da112707SJunchao Zhang m = fact->rmap->n; 1449da112707SJunchao Zhang nz = aij->nz; 1450da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 1451da112707SJunchao Zhang Acsr = (CsrMatrix *)Acusp->mat->mat; 1452da112707SJunchao Zhang PetscCallCUDA(cudaMemcpyAsync(fs->csrVal, Acsr->values->data().get(), sizeof(PetscScalar) * nz, cudaMemcpyDeviceToDevice, PetscDefaultCudaStream)); 1453da112707SJunchao Zhang 1454da112707SJunchao Zhang /* Factorize fact inplace */ 14559371c9d4SSatish Balay if (m) 14569371c9d4SSatish Balay PetscCallCUSPARSE(cusparseXcsrilu02(fs->handle, m, nz, /* cusparseXcsrilu02 errors out with empty matrices (m=0) */ 14579371c9d4SSatish Balay fs->matDescr_M, fs->csrVal, fs->csrRowPtr, fs->csrColIdx, fs->ilu0Info_M, fs->policy_M, fs->factBuffer_M)); 1458da112707SJunchao Zhang if (PetscDefined(USE_DEBUG)) { 1459da112707SJunchao Zhang int numerical_zero; 1460da112707SJunchao Zhang cusparseStatus_t status; 1461da112707SJunchao Zhang status = cusparseXcsrilu02_zeroPivot(fs->handle, fs->ilu0Info_M, &numerical_zero); 1462da112707SJunchao Zhang PetscAssert(CUSPARSE_STATUS_ZERO_PIVOT != status, PETSC_COMM_SELF, PETSC_ERR_USER_INPUT, "Numerical zero pivot detected in csrilu02: A(%d,%d) is zero", numerical_zero, numerical_zero); 1463da112707SJunchao Zhang } 1464da112707SJunchao Zhang 146512ba2bc6SJunchao Zhang /* cusparseSpSV_analysis() is numeric, i.e., it requires valid matrix values, therefore, we do it after cusparseXcsrilu02() 146612ba2bc6SJunchao Zhang See discussion at https://github.com/NVIDIA/CUDALibrarySamples/issues/78 146712ba2bc6SJunchao Zhang */ 14689371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpSV_analysis(fs->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, &PETSC_CUSPARSE_ONE, fs->spMatDescr_L, fs->dnVecDescr_X, fs->dnVecDescr_Y, cusparse_scalartype, CUSPARSE_SPSV_ALG_DEFAULT, fs->spsvDescr_L, fs->spsvBuffer_L)); 1469da112707SJunchao Zhang 14709371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpSV_analysis(fs->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, &PETSC_CUSPARSE_ONE, fs->spMatDescr_U, fs->dnVecDescr_X, fs->dnVecDescr_Y, cusparse_scalartype, CUSPARSE_SPSV_ALG_DEFAULT, fs->spsvDescr_U, fs->spsvBuffer_U)); 1471da112707SJunchao Zhang 147212ba2bc6SJunchao Zhang /* L, U values have changed, reset the flag to indicate we need to redo cusparseSpSV_analysis() for transpose solve */ 147312ba2bc6SJunchao Zhang fs->updatedTransposeSpSVAnalysis = PETSC_FALSE; 147412ba2bc6SJunchao Zhang 1475da112707SJunchao Zhang fact->offloadmask = PETSC_OFFLOAD_GPU; 1476da112707SJunchao Zhang fact->ops->solve = MatSolve_SeqAIJCUSPARSE_ILU0; 1477da112707SJunchao Zhang fact->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE_ILU0; 1478da112707SJunchao Zhang fact->ops->matsolve = NULL; 1479da112707SJunchao Zhang fact->ops->matsolvetranspose = NULL; 1480da112707SJunchao Zhang PetscCall(PetscLogGpuFlops(fs->numericFactFlops)); 14813ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1482da112707SJunchao Zhang } 1483da112707SJunchao Zhang 14848eb1d50fSPierre Jolivet static PetscErrorCode MatILUFactorSymbolic_SeqAIJCUSPARSE_ILU0(Mat fact, Mat A, IS, IS, const MatFactorInfo *info) 1485d71ae5a4SJacob Faibussowitsch { 1486da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *fs = (Mat_SeqAIJCUSPARSETriFactors *)fact->spptr; 1487da112707SJunchao Zhang Mat_SeqAIJ *aij = (Mat_SeqAIJ *)fact->data; 1488da112707SJunchao Zhang PetscInt m, nz; 1489da112707SJunchao Zhang 1490da112707SJunchao Zhang PetscFunctionBegin; 1491da112707SJunchao Zhang if (PetscDefined(USE_DEBUG)) { 1492da112707SJunchao Zhang PetscInt i; 1493da112707SJunchao Zhang PetscBool flg, missing; 1494da112707SJunchao Zhang 1495da112707SJunchao Zhang PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQAIJCUSPARSE, &flg)); 1496da112707SJunchao Zhang PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_GPU, "Expected MATSEQAIJCUSPARSE, but input is %s", ((PetscObject)A)->type_name); 1497da112707SJunchao Zhang PetscCheck(A->rmap->n == A->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Must be square matrix, rows %" PetscInt_FMT " columns %" PetscInt_FMT, A->rmap->n, A->cmap->n); 1498da112707SJunchao Zhang PetscCall(MatMissingDiagonal(A, &missing, &i)); 1499da112707SJunchao Zhang PetscCheck(!missing, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Matrix is missing diagonal entry %" PetscInt_FMT, i); 1500da112707SJunchao Zhang } 1501da112707SJunchao Zhang 1502da112707SJunchao Zhang /* Free the old stale stuff */ 1503da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSETriFactors_Reset(&fs)); 1504da112707SJunchao Zhang 1505da112707SJunchao Zhang /* Copy over A's meta data to fact. Note that we also allocated fact's i,j,a on host, 1506da112707SJunchao Zhang but they will not be used. Allocate them just for easy debugging. 1507da112707SJunchao Zhang */ 1508da112707SJunchao Zhang PetscCall(MatDuplicateNoCreate_SeqAIJ(fact, A, MAT_DO_NOT_COPY_VALUES, PETSC_TRUE /*malloc*/)); 1509da112707SJunchao Zhang 1510da112707SJunchao Zhang fact->offloadmask = PETSC_OFFLOAD_BOTH; 1511da112707SJunchao Zhang fact->factortype = MAT_FACTOR_ILU; 1512da112707SJunchao Zhang fact->info.factor_mallocs = 0; 1513da112707SJunchao Zhang fact->info.fill_ratio_given = info->fill; 1514da112707SJunchao Zhang fact->info.fill_ratio_needed = 1.0; 1515da112707SJunchao Zhang 1516da112707SJunchao Zhang aij->row = NULL; 1517da112707SJunchao Zhang aij->col = NULL; 1518da112707SJunchao Zhang 1519da112707SJunchao Zhang /* ====================================================================== */ 1520da112707SJunchao Zhang /* Copy A's i, j to fact and also allocate the value array of fact. */ 1521da112707SJunchao Zhang /* We'll do in-place factorization on fact */ 1522da112707SJunchao Zhang /* ====================================================================== */ 1523da112707SJunchao Zhang const int *Ai, *Aj; 1524da112707SJunchao Zhang 1525da112707SJunchao Zhang m = fact->rmap->n; 1526da112707SJunchao Zhang nz = aij->nz; 1527da112707SJunchao Zhang 1528da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->csrRowPtr, sizeof(int) * (m + 1))); 1529da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->csrColIdx, sizeof(int) * nz)); 1530da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->csrVal, sizeof(PetscScalar) * nz)); 1531da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSEGetIJ(A, PETSC_FALSE, &Ai, &Aj)); /* Do not use compressed Ai */ 1532da112707SJunchao Zhang PetscCallCUDA(cudaMemcpyAsync(fs->csrRowPtr, Ai, sizeof(int) * (m + 1), cudaMemcpyDeviceToDevice, PetscDefaultCudaStream)); 1533da112707SJunchao Zhang PetscCallCUDA(cudaMemcpyAsync(fs->csrColIdx, Aj, sizeof(int) * nz, cudaMemcpyDeviceToDevice, PetscDefaultCudaStream)); 1534da112707SJunchao Zhang 1535da112707SJunchao Zhang /* ====================================================================== */ 1536da112707SJunchao Zhang /* Create descriptors for M, L, U */ 1537da112707SJunchao Zhang /* ====================================================================== */ 1538da112707SJunchao Zhang cusparseFillMode_t fillMode; 1539da112707SJunchao Zhang cusparseDiagType_t diagType; 1540da112707SJunchao Zhang 1541da112707SJunchao Zhang PetscCallCUSPARSE(cusparseCreateMatDescr(&fs->matDescr_M)); 1542da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSetMatIndexBase(fs->matDescr_M, CUSPARSE_INDEX_BASE_ZERO)); 1543da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSetMatType(fs->matDescr_M, CUSPARSE_MATRIX_TYPE_GENERAL)); 1544da112707SJunchao Zhang 1545da112707SJunchao Zhang /* https://docs.nvidia.com/cuda/cusparse/index.html#cusparseDiagType_t 1546da112707SJunchao Zhang cusparseDiagType_t: This type indicates if the matrix diagonal entries are unity. The diagonal elements are always 1547da112707SJunchao Zhang assumed to be present, but if CUSPARSE_DIAG_TYPE_UNIT is passed to an API routine, then the routine assumes that 1548da112707SJunchao Zhang all diagonal entries are unity and will not read or modify those entries. Note that in this case the routine 1549da112707SJunchao Zhang assumes the diagonal entries are equal to one, regardless of what those entries are actually set to in memory. 1550da112707SJunchao Zhang */ 1551da112707SJunchao Zhang fillMode = CUSPARSE_FILL_MODE_LOWER; 1552da112707SJunchao Zhang diagType = CUSPARSE_DIAG_TYPE_UNIT; 15539371c9d4SSatish Balay PetscCallCUSPARSE(cusparseCreateCsr(&fs->spMatDescr_L, m, m, nz, fs->csrRowPtr, fs->csrColIdx, fs->csrVal, CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype)); 15549371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpMatSetAttribute(fs->spMatDescr_L, CUSPARSE_SPMAT_FILL_MODE, &fillMode, sizeof(fillMode))); 15559371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpMatSetAttribute(fs->spMatDescr_L, CUSPARSE_SPMAT_DIAG_TYPE, &diagType, sizeof(diagType))); 1556da112707SJunchao Zhang 1557da112707SJunchao Zhang fillMode = CUSPARSE_FILL_MODE_UPPER; 1558da112707SJunchao Zhang diagType = CUSPARSE_DIAG_TYPE_NON_UNIT; 15599371c9d4SSatish Balay PetscCallCUSPARSE(cusparseCreateCsr(&fs->spMatDescr_U, m, m, nz, fs->csrRowPtr, fs->csrColIdx, fs->csrVal, CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype)); 15609371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpMatSetAttribute(fs->spMatDescr_U, CUSPARSE_SPMAT_FILL_MODE, &fillMode, sizeof(fillMode))); 15619371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpMatSetAttribute(fs->spMatDescr_U, CUSPARSE_SPMAT_DIAG_TYPE, &diagType, sizeof(diagType))); 1562da112707SJunchao Zhang 1563da112707SJunchao Zhang /* ========================================================================= */ 1564da112707SJunchao Zhang /* Query buffer sizes for csrilu0, SpSV and allocate buffers */ 1565da112707SJunchao Zhang /* ========================================================================= */ 1566da112707SJunchao Zhang PetscCallCUSPARSE(cusparseCreateCsrilu02Info(&fs->ilu0Info_M)); 15679371c9d4SSatish Balay if (m) 15689371c9d4SSatish Balay PetscCallCUSPARSE(cusparseXcsrilu02_bufferSize(fs->handle, m, nz, /* cusparseXcsrilu02 errors out with empty matrices (m=0) */ 15699371c9d4SSatish Balay fs->matDescr_M, fs->csrVal, fs->csrRowPtr, fs->csrColIdx, fs->ilu0Info_M, &fs->factBufferSize_M)); 1570da112707SJunchao Zhang 1571da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->X, sizeof(PetscScalar) * m)); 1572da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->Y, sizeof(PetscScalar) * m)); 1573da112707SJunchao Zhang 1574da112707SJunchao Zhang PetscCallCUSPARSE(cusparseCreateDnVec(&fs->dnVecDescr_X, m, fs->X, cusparse_scalartype)); 1575da112707SJunchao Zhang PetscCallCUSPARSE(cusparseCreateDnVec(&fs->dnVecDescr_Y, m, fs->Y, cusparse_scalartype)); 1576da112707SJunchao Zhang 1577da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_createDescr(&fs->spsvDescr_L)); 15789371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpSV_bufferSize(fs->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, &PETSC_CUSPARSE_ONE, fs->spMatDescr_L, fs->dnVecDescr_X, fs->dnVecDescr_Y, cusparse_scalartype, CUSPARSE_SPSV_ALG_DEFAULT, fs->spsvDescr_L, &fs->spsvBufferSize_L)); 1579da112707SJunchao Zhang 1580da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_createDescr(&fs->spsvDescr_U)); 15819371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpSV_bufferSize(fs->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, &PETSC_CUSPARSE_ONE, fs->spMatDescr_U, fs->dnVecDescr_X, fs->dnVecDescr_Y, cusparse_scalartype, CUSPARSE_SPSV_ALG_DEFAULT, fs->spsvDescr_U, &fs->spsvBufferSize_U)); 1582da112707SJunchao Zhang 1583da112707SJunchao Zhang /* From my experiment with the example at https://github.com/NVIDIA/CUDALibrarySamples/tree/master/cuSPARSE/bicgstab, 158412ba2bc6SJunchao Zhang and discussion at https://github.com/NVIDIA/CUDALibrarySamples/issues/77, 158512ba2bc6SJunchao Zhang spsvBuffer_L/U can not be shared (i.e., the same) for our case, but factBuffer_M can share with either of spsvBuffer_L/U. 158612ba2bc6SJunchao Zhang To save memory, we make factBuffer_M share with the bigger of spsvBuffer_L/U. 1587da112707SJunchao Zhang */ 158812ba2bc6SJunchao Zhang if (fs->spsvBufferSize_L > fs->spsvBufferSize_U) { 158912ba2bc6SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->factBuffer_M, PetscMax(fs->spsvBufferSize_L, (size_t)fs->factBufferSize_M))); 159012ba2bc6SJunchao Zhang fs->spsvBuffer_L = fs->factBuffer_M; 1591da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->spsvBuffer_U, fs->spsvBufferSize_U)); 159212ba2bc6SJunchao Zhang } else { 159312ba2bc6SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->factBuffer_M, PetscMax(fs->spsvBufferSize_U, (size_t)fs->factBufferSize_M))); 159412ba2bc6SJunchao Zhang fs->spsvBuffer_U = fs->factBuffer_M; 1595da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->spsvBuffer_L, fs->spsvBufferSize_L)); 159612ba2bc6SJunchao Zhang } 1597da112707SJunchao Zhang 1598da112707SJunchao Zhang /* ========================================================================== */ 1599da112707SJunchao Zhang /* Perform analysis of ilu0 on M, SpSv on L and U */ 1600da112707SJunchao Zhang /* The lower(upper) triangular part of M has the same sparsity pattern as L(U)*/ 1601da112707SJunchao Zhang /* ========================================================================== */ 1602da112707SJunchao Zhang int structural_zero; 1603da112707SJunchao Zhang cusparseStatus_t status; 1604da112707SJunchao Zhang 1605da112707SJunchao Zhang fs->policy_M = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 16069371c9d4SSatish Balay if (m) 16079371c9d4SSatish Balay PetscCallCUSPARSE(cusparseXcsrilu02_analysis(fs->handle, m, nz, /* cusparseXcsrilu02 errors out with empty matrices (m=0) */ 16089371c9d4SSatish Balay fs->matDescr_M, fs->csrVal, fs->csrRowPtr, fs->csrColIdx, fs->ilu0Info_M, fs->policy_M, fs->factBuffer_M)); 1609da112707SJunchao Zhang if (PetscDefined(USE_DEBUG)) { 1610da112707SJunchao Zhang /* Function cusparseXcsrilu02_zeroPivot() is a blocking call. It calls cudaDeviceSynchronize() to make sure all previous kernels are done. */ 1611da112707SJunchao Zhang status = cusparseXcsrilu02_zeroPivot(fs->handle, fs->ilu0Info_M, &structural_zero); 1612da112707SJunchao Zhang PetscCheck(CUSPARSE_STATUS_ZERO_PIVOT != status, PETSC_COMM_SELF, PETSC_ERR_USER_INPUT, "Structural zero pivot detected in csrilu02: A(%d,%d) is missing", structural_zero, structural_zero); 1613da112707SJunchao Zhang } 1614da112707SJunchao Zhang 1615da112707SJunchao Zhang /* Estimate FLOPs of the numeric factorization */ 16160dd8c0acSJunchao Zhang { 1617da112707SJunchao Zhang Mat_SeqAIJ *Aseq = (Mat_SeqAIJ *)A->data; 16180dd8c0acSJunchao Zhang PetscInt *Ai, *Adiag, nzRow, nzLeft; 1619da112707SJunchao Zhang PetscLogDouble flops = 0.0; 1620da112707SJunchao Zhang 1621da112707SJunchao Zhang PetscCall(MatMarkDiagonal_SeqAIJ(A)); 1622da112707SJunchao Zhang Ai = Aseq->i; 1623da112707SJunchao Zhang Adiag = Aseq->diag; 1624da112707SJunchao Zhang for (PetscInt i = 0; i < m; i++) { 1625da112707SJunchao Zhang if (Ai[i] < Adiag[i] && Adiag[i] < Ai[i + 1]) { /* There are nonzeros left to the diagonal of row i */ 1626da112707SJunchao Zhang nzRow = Ai[i + 1] - Ai[i]; 1627da112707SJunchao Zhang nzLeft = Adiag[i] - Ai[i]; 1628da112707SJunchao Zhang /* We want to eliminate nonzeros left to the diagonal one by one. Assume each time, nonzeros right 1629da112707SJunchao Zhang and include the eliminated one will be updated, which incurs a multiplication and an addition. 1630da112707SJunchao Zhang */ 1631da112707SJunchao Zhang nzLeft = (nzRow - 1) / 2; 1632da112707SJunchao Zhang flops += nzLeft * (2.0 * nzRow - nzLeft + 1); 1633da112707SJunchao Zhang } 1634da112707SJunchao Zhang } 1635da112707SJunchao Zhang fs->numericFactFlops = flops; 16360dd8c0acSJunchao Zhang } 1637da112707SJunchao Zhang fact->ops->lufactornumeric = MatILUFactorNumeric_SeqAIJCUSPARSE_ILU0; 16383ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1639da112707SJunchao Zhang } 1640da112707SJunchao Zhang 1641d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSolve_SeqAIJCUSPARSE_ICC0(Mat fact, Vec b, Vec x) 1642d71ae5a4SJacob Faibussowitsch { 1643da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *fs = (Mat_SeqAIJCUSPARSETriFactors *)fact->spptr; 1644da112707SJunchao Zhang Mat_SeqAIJ *aij = (Mat_SeqAIJ *)fact->data; 1645da112707SJunchao Zhang const PetscScalar *barray; 1646da112707SJunchao Zhang PetscScalar *xarray; 1647da112707SJunchao Zhang 1648da112707SJunchao Zhang PetscFunctionBegin; 1649da112707SJunchao Zhang PetscCall(VecCUDAGetArrayWrite(x, &xarray)); 1650da112707SJunchao Zhang PetscCall(VecCUDAGetArrayRead(b, &barray)); 1651da112707SJunchao Zhang PetscCall(PetscLogGpuTimeBegin()); 1652da112707SJunchao Zhang 1653da112707SJunchao Zhang /* Solve L*y = b */ 1654da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDnVecSetValues(fs->dnVecDescr_X, (void *)barray)); 1655da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDnVecSetValues(fs->dnVecDescr_Y, fs->Y)); 16569371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpSV_solve(fs->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, &PETSC_CUSPARSE_ONE, fs->spMatDescr_L, /* L Y = X */ 16579371c9d4SSatish Balay fs->dnVecDescr_X, fs->dnVecDescr_Y, cusparse_scalartype, CUSPARSE_SPSV_ALG_DEFAULT, fs->spsvDescr_L)); 1658da112707SJunchao Zhang 1659da112707SJunchao Zhang /* Solve Lt*x = y */ 1660da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDnVecSetValues(fs->dnVecDescr_X, xarray)); 16619371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpSV_solve(fs->handle, CUSPARSE_OPERATION_TRANSPOSE, &PETSC_CUSPARSE_ONE, fs->spMatDescr_L, /* Lt X = Y */ 16629371c9d4SSatish Balay fs->dnVecDescr_Y, fs->dnVecDescr_X, cusparse_scalartype, CUSPARSE_SPSV_ALG_DEFAULT, fs->spsvDescr_Lt)); 1663da112707SJunchao Zhang 1664da112707SJunchao Zhang PetscCall(VecCUDARestoreArrayRead(b, &barray)); 1665da112707SJunchao Zhang PetscCall(VecCUDARestoreArrayWrite(x, &xarray)); 1666da112707SJunchao Zhang 1667da112707SJunchao Zhang PetscCall(PetscLogGpuTimeEnd()); 1668da112707SJunchao Zhang PetscCall(PetscLogGpuFlops(2.0 * aij->nz - fact->rmap->n)); 16693ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1670da112707SJunchao Zhang } 1671da112707SJunchao Zhang 16728eb1d50fSPierre Jolivet static PetscErrorCode MatICCFactorNumeric_SeqAIJCUSPARSE_ICC0(Mat fact, Mat A, const MatFactorInfo *) 1673d71ae5a4SJacob Faibussowitsch { 1674da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *fs = (Mat_SeqAIJCUSPARSETriFactors *)fact->spptr; 1675da112707SJunchao Zhang Mat_SeqAIJ *aij = (Mat_SeqAIJ *)fact->data; 1676da112707SJunchao Zhang Mat_SeqAIJCUSPARSE *Acusp = (Mat_SeqAIJCUSPARSE *)A->spptr; 1677da112707SJunchao Zhang CsrMatrix *Acsr; 1678da112707SJunchao Zhang PetscInt m, nz; 1679da112707SJunchao Zhang PetscBool flg; 1680da112707SJunchao Zhang 1681da112707SJunchao Zhang PetscFunctionBegin; 1682da112707SJunchao Zhang if (PetscDefined(USE_DEBUG)) { 1683da112707SJunchao Zhang PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQAIJCUSPARSE, &flg)); 1684da112707SJunchao Zhang PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_GPU, "Expected MATSEQAIJCUSPARSE, but input is %s", ((PetscObject)A)->type_name); 1685da112707SJunchao Zhang } 1686da112707SJunchao Zhang 1687da112707SJunchao Zhang /* Copy A's value to fact */ 1688da112707SJunchao Zhang m = fact->rmap->n; 1689da112707SJunchao Zhang nz = aij->nz; 1690da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 1691da112707SJunchao Zhang Acsr = (CsrMatrix *)Acusp->mat->mat; 1692da112707SJunchao Zhang PetscCallCUDA(cudaMemcpyAsync(fs->csrVal, Acsr->values->data().get(), sizeof(PetscScalar) * nz, cudaMemcpyDeviceToDevice, PetscDefaultCudaStream)); 1693da112707SJunchao Zhang 1694da112707SJunchao Zhang /* Factorize fact inplace */ 1695da112707SJunchao Zhang /* https://docs.nvidia.com/cuda/cusparse/index.html#csric02_solve 1696da112707SJunchao Zhang Function csric02() only takes the lower triangular part of matrix A to perform factorization. 1697da112707SJunchao Zhang The matrix type must be CUSPARSE_MATRIX_TYPE_GENERAL, the fill mode and diagonal type are ignored, 1698da112707SJunchao Zhang and the strictly upper triangular part is ignored and never touched. It does not matter if A is Hermitian or not. 1699da112707SJunchao Zhang In other words, from the point of view of csric02() A is Hermitian and only the lower triangular part is provided. 1700da112707SJunchao Zhang */ 17019371c9d4SSatish Balay if (m) PetscCallCUSPARSE(cusparseXcsric02(fs->handle, m, nz, fs->matDescr_M, fs->csrVal, fs->csrRowPtr, fs->csrColIdx, fs->ic0Info_M, fs->policy_M, fs->factBuffer_M)); 1702da112707SJunchao Zhang if (PetscDefined(USE_DEBUG)) { 1703da112707SJunchao Zhang int numerical_zero; 1704da112707SJunchao Zhang cusparseStatus_t status; 1705da112707SJunchao Zhang status = cusparseXcsric02_zeroPivot(fs->handle, fs->ic0Info_M, &numerical_zero); 1706da112707SJunchao Zhang PetscAssert(CUSPARSE_STATUS_ZERO_PIVOT != status, PETSC_COMM_SELF, PETSC_ERR_USER_INPUT, "Numerical zero pivot detected in csric02: A(%d,%d) is zero", numerical_zero, numerical_zero); 1707da112707SJunchao Zhang } 1708da112707SJunchao Zhang 17099371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpSV_analysis(fs->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, &PETSC_CUSPARSE_ONE, fs->spMatDescr_L, fs->dnVecDescr_X, fs->dnVecDescr_Y, cusparse_scalartype, CUSPARSE_SPSV_ALG_DEFAULT, fs->spsvDescr_L, fs->spsvBuffer_L)); 1710da112707SJunchao Zhang 1711da112707SJunchao Zhang /* Note that cusparse reports this error if we use double and CUSPARSE_OPERATION_CONJUGATE_TRANSPOSE 1712da112707SJunchao Zhang ** On entry to cusparseSpSV_analysis(): conjugate transpose (opA) is not supported for matA data type, current -> CUDA_R_64F 1713da112707SJunchao Zhang */ 17149371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpSV_analysis(fs->handle, CUSPARSE_OPERATION_TRANSPOSE, &PETSC_CUSPARSE_ONE, fs->spMatDescr_L, fs->dnVecDescr_X, fs->dnVecDescr_Y, cusparse_scalartype, CUSPARSE_SPSV_ALG_DEFAULT, fs->spsvDescr_Lt, fs->spsvBuffer_Lt)); 1715da112707SJunchao Zhang 1716da112707SJunchao Zhang fact->offloadmask = PETSC_OFFLOAD_GPU; 1717da112707SJunchao Zhang fact->ops->solve = MatSolve_SeqAIJCUSPARSE_ICC0; 1718da112707SJunchao Zhang fact->ops->solvetranspose = MatSolve_SeqAIJCUSPARSE_ICC0; 1719da112707SJunchao Zhang fact->ops->matsolve = NULL; 1720da112707SJunchao Zhang fact->ops->matsolvetranspose = NULL; 1721da112707SJunchao Zhang PetscCall(PetscLogGpuFlops(fs->numericFactFlops)); 17223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1723da112707SJunchao Zhang } 1724da112707SJunchao Zhang 17258eb1d50fSPierre Jolivet static PetscErrorCode MatICCFactorSymbolic_SeqAIJCUSPARSE_ICC0(Mat fact, Mat A, IS, const MatFactorInfo *info) 1726d71ae5a4SJacob Faibussowitsch { 1727da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *fs = (Mat_SeqAIJCUSPARSETriFactors *)fact->spptr; 1728da112707SJunchao Zhang Mat_SeqAIJ *aij = (Mat_SeqAIJ *)fact->data; 1729da112707SJunchao Zhang PetscInt m, nz; 1730da112707SJunchao Zhang 1731da112707SJunchao Zhang PetscFunctionBegin; 1732da112707SJunchao Zhang if (PetscDefined(USE_DEBUG)) { 1733da112707SJunchao Zhang PetscInt i; 1734da112707SJunchao Zhang PetscBool flg, missing; 1735da112707SJunchao Zhang 1736da112707SJunchao Zhang PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQAIJCUSPARSE, &flg)); 1737da112707SJunchao Zhang PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_GPU, "Expected MATSEQAIJCUSPARSE, but input is %s", ((PetscObject)A)->type_name); 1738da112707SJunchao Zhang PetscCheck(A->rmap->n == A->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Must be square matrix, rows %" PetscInt_FMT " columns %" PetscInt_FMT, A->rmap->n, A->cmap->n); 1739da112707SJunchao Zhang PetscCall(MatMissingDiagonal(A, &missing, &i)); 1740da112707SJunchao Zhang PetscCheck(!missing, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Matrix is missing diagonal entry %" PetscInt_FMT, i); 1741da112707SJunchao Zhang } 1742da112707SJunchao Zhang 1743da112707SJunchao Zhang /* Free the old stale stuff */ 1744da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSETriFactors_Reset(&fs)); 1745da112707SJunchao Zhang 1746da112707SJunchao Zhang /* Copy over A's meta data to fact. Note that we also allocated fact's i,j,a on host, 1747da112707SJunchao Zhang but they will not be used. Allocate them just for easy debugging. 1748da112707SJunchao Zhang */ 1749da112707SJunchao Zhang PetscCall(MatDuplicateNoCreate_SeqAIJ(fact, A, MAT_DO_NOT_COPY_VALUES, PETSC_TRUE /*malloc*/)); 1750da112707SJunchao Zhang 1751da112707SJunchao Zhang fact->offloadmask = PETSC_OFFLOAD_BOTH; 1752da112707SJunchao Zhang fact->factortype = MAT_FACTOR_ICC; 1753da112707SJunchao Zhang fact->info.factor_mallocs = 0; 1754da112707SJunchao Zhang fact->info.fill_ratio_given = info->fill; 1755da112707SJunchao Zhang fact->info.fill_ratio_needed = 1.0; 1756da112707SJunchao Zhang 1757da112707SJunchao Zhang aij->row = NULL; 1758da112707SJunchao Zhang aij->col = NULL; 1759da112707SJunchao Zhang 1760da112707SJunchao Zhang /* ====================================================================== */ 1761da112707SJunchao Zhang /* Copy A's i, j to fact and also allocate the value array of fact. */ 1762da112707SJunchao Zhang /* We'll do in-place factorization on fact */ 1763da112707SJunchao Zhang /* ====================================================================== */ 1764da112707SJunchao Zhang const int *Ai, *Aj; 1765da112707SJunchao Zhang 1766da112707SJunchao Zhang m = fact->rmap->n; 1767da112707SJunchao Zhang nz = aij->nz; 1768da112707SJunchao Zhang 1769da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->csrRowPtr, sizeof(int) * (m + 1))); 1770da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->csrColIdx, sizeof(int) * nz)); 1771da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->csrVal, sizeof(PetscScalar) * nz)); 1772da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSEGetIJ(A, PETSC_FALSE, &Ai, &Aj)); /* Do not use compressed Ai */ 1773da112707SJunchao Zhang PetscCallCUDA(cudaMemcpyAsync(fs->csrRowPtr, Ai, sizeof(int) * (m + 1), cudaMemcpyDeviceToDevice, PetscDefaultCudaStream)); 1774da112707SJunchao Zhang PetscCallCUDA(cudaMemcpyAsync(fs->csrColIdx, Aj, sizeof(int) * nz, cudaMemcpyDeviceToDevice, PetscDefaultCudaStream)); 1775da112707SJunchao Zhang 1776da112707SJunchao Zhang /* ====================================================================== */ 1777da112707SJunchao Zhang /* Create mat descriptors for M, L */ 1778da112707SJunchao Zhang /* ====================================================================== */ 1779da112707SJunchao Zhang cusparseFillMode_t fillMode; 1780da112707SJunchao Zhang cusparseDiagType_t diagType; 1781da112707SJunchao Zhang 1782da112707SJunchao Zhang PetscCallCUSPARSE(cusparseCreateMatDescr(&fs->matDescr_M)); 1783da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSetMatIndexBase(fs->matDescr_M, CUSPARSE_INDEX_BASE_ZERO)); 1784da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSetMatType(fs->matDescr_M, CUSPARSE_MATRIX_TYPE_GENERAL)); 1785da112707SJunchao Zhang 1786da112707SJunchao Zhang /* https://docs.nvidia.com/cuda/cusparse/index.html#cusparseDiagType_t 1787da112707SJunchao Zhang cusparseDiagType_t: This type indicates if the matrix diagonal entries are unity. The diagonal elements are always 1788da112707SJunchao Zhang assumed to be present, but if CUSPARSE_DIAG_TYPE_UNIT is passed to an API routine, then the routine assumes that 1789da112707SJunchao Zhang all diagonal entries are unity and will not read or modify those entries. Note that in this case the routine 1790da112707SJunchao Zhang assumes the diagonal entries are equal to one, regardless of what those entries are actually set to in memory. 1791da112707SJunchao Zhang */ 1792da112707SJunchao Zhang fillMode = CUSPARSE_FILL_MODE_LOWER; 1793da112707SJunchao Zhang diagType = CUSPARSE_DIAG_TYPE_NON_UNIT; 17949371c9d4SSatish Balay PetscCallCUSPARSE(cusparseCreateCsr(&fs->spMatDescr_L, m, m, nz, fs->csrRowPtr, fs->csrColIdx, fs->csrVal, CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype)); 17959371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpMatSetAttribute(fs->spMatDescr_L, CUSPARSE_SPMAT_FILL_MODE, &fillMode, sizeof(fillMode))); 17969371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpMatSetAttribute(fs->spMatDescr_L, CUSPARSE_SPMAT_DIAG_TYPE, &diagType, sizeof(diagType))); 1797da112707SJunchao Zhang 1798da112707SJunchao Zhang /* ========================================================================= */ 1799da112707SJunchao Zhang /* Query buffer sizes for csric0, SpSV of L and Lt, and allocate buffers */ 1800da112707SJunchao Zhang /* ========================================================================= */ 1801da112707SJunchao Zhang PetscCallCUSPARSE(cusparseCreateCsric02Info(&fs->ic0Info_M)); 18029371c9d4SSatish Balay if (m) PetscCallCUSPARSE(cusparseXcsric02_bufferSize(fs->handle, m, nz, fs->matDescr_M, fs->csrVal, fs->csrRowPtr, fs->csrColIdx, fs->ic0Info_M, &fs->factBufferSize_M)); 1803da112707SJunchao Zhang 1804da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->X, sizeof(PetscScalar) * m)); 1805da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->Y, sizeof(PetscScalar) * m)); 1806da112707SJunchao Zhang 1807da112707SJunchao Zhang PetscCallCUSPARSE(cusparseCreateDnVec(&fs->dnVecDescr_X, m, fs->X, cusparse_scalartype)); 1808da112707SJunchao Zhang PetscCallCUSPARSE(cusparseCreateDnVec(&fs->dnVecDescr_Y, m, fs->Y, cusparse_scalartype)); 1809da112707SJunchao Zhang 1810da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_createDescr(&fs->spsvDescr_L)); 18119371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpSV_bufferSize(fs->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, &PETSC_CUSPARSE_ONE, fs->spMatDescr_L, fs->dnVecDescr_X, fs->dnVecDescr_Y, cusparse_scalartype, CUSPARSE_SPSV_ALG_DEFAULT, fs->spsvDescr_L, &fs->spsvBufferSize_L)); 1812da112707SJunchao Zhang 1813da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_createDescr(&fs->spsvDescr_Lt)); 18149371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpSV_bufferSize(fs->handle, CUSPARSE_OPERATION_TRANSPOSE, &PETSC_CUSPARSE_ONE, fs->spMatDescr_L, fs->dnVecDescr_X, fs->dnVecDescr_Y, cusparse_scalartype, CUSPARSE_SPSV_ALG_DEFAULT, fs->spsvDescr_Lt, &fs->spsvBufferSize_Lt)); 1815da112707SJunchao Zhang 181612ba2bc6SJunchao Zhang /* To save device memory, we make the factorization buffer share with one of the solver buffer. 181712ba2bc6SJunchao Zhang See also comments in MatILUFactorSymbolic_SeqAIJCUSPARSE_ILU0(). 181812ba2bc6SJunchao Zhang */ 181912ba2bc6SJunchao Zhang if (fs->spsvBufferSize_L > fs->spsvBufferSize_Lt) { 182012ba2bc6SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->factBuffer_M, PetscMax(fs->spsvBufferSize_L, (size_t)fs->factBufferSize_M))); 182112ba2bc6SJunchao Zhang fs->spsvBuffer_L = fs->factBuffer_M; 1822da112707SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->spsvBuffer_Lt, fs->spsvBufferSize_Lt)); 182312ba2bc6SJunchao Zhang } else { 182412ba2bc6SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->factBuffer_M, PetscMax(fs->spsvBufferSize_Lt, (size_t)fs->factBufferSize_M))); 182512ba2bc6SJunchao Zhang fs->spsvBuffer_Lt = fs->factBuffer_M; 182612ba2bc6SJunchao Zhang PetscCallCUDA(cudaMalloc((void **)&fs->spsvBuffer_L, fs->spsvBufferSize_L)); 182712ba2bc6SJunchao Zhang } 1828da112707SJunchao Zhang 1829da112707SJunchao Zhang /* ========================================================================== */ 1830da112707SJunchao Zhang /* Perform analysis of ic0 on M */ 1831da112707SJunchao Zhang /* The lower triangular part of M has the same sparsity pattern as L */ 1832da112707SJunchao Zhang /* ========================================================================== */ 1833da112707SJunchao Zhang int structural_zero; 1834da112707SJunchao Zhang cusparseStatus_t status; 1835da112707SJunchao Zhang 1836da112707SJunchao Zhang fs->policy_M = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 18379371c9d4SSatish Balay if (m) PetscCallCUSPARSE(cusparseXcsric02_analysis(fs->handle, m, nz, fs->matDescr_M, fs->csrVal, fs->csrRowPtr, fs->csrColIdx, fs->ic0Info_M, fs->policy_M, fs->factBuffer_M)); 1838da112707SJunchao Zhang if (PetscDefined(USE_DEBUG)) { 1839da112707SJunchao Zhang /* Function cusparseXcsric02_zeroPivot() is a blocking call. It calls cudaDeviceSynchronize() to make sure all previous kernels are done. */ 1840da112707SJunchao Zhang status = cusparseXcsric02_zeroPivot(fs->handle, fs->ic0Info_M, &structural_zero); 1841da112707SJunchao Zhang PetscCheck(CUSPARSE_STATUS_ZERO_PIVOT != status, PETSC_COMM_SELF, PETSC_ERR_USER_INPUT, "Structural zero pivot detected in csric02: A(%d,%d) is missing", structural_zero, structural_zero); 1842da112707SJunchao Zhang } 1843da112707SJunchao Zhang 1844da112707SJunchao Zhang /* Estimate FLOPs of the numeric factorization */ 18450dd8c0acSJunchao Zhang { 1846da112707SJunchao Zhang Mat_SeqAIJ *Aseq = (Mat_SeqAIJ *)A->data; 18470dd8c0acSJunchao Zhang PetscInt *Ai, nzRow, nzLeft; 1848da112707SJunchao Zhang PetscLogDouble flops = 0.0; 1849da112707SJunchao Zhang 1850da112707SJunchao Zhang Ai = Aseq->i; 1851da112707SJunchao Zhang for (PetscInt i = 0; i < m; i++) { 1852da112707SJunchao Zhang nzRow = Ai[i + 1] - Ai[i]; 1853da112707SJunchao Zhang if (nzRow > 1) { 1854da112707SJunchao Zhang /* We want to eliminate nonzeros left to the diagonal one by one. Assume each time, nonzeros right 1855da112707SJunchao Zhang and include the eliminated one will be updated, which incurs a multiplication and an addition. 1856da112707SJunchao Zhang */ 1857da112707SJunchao Zhang nzLeft = (nzRow - 1) / 2; 1858da112707SJunchao Zhang flops += nzLeft * (2.0 * nzRow - nzLeft + 1); 1859da112707SJunchao Zhang } 1860da112707SJunchao Zhang } 1861da112707SJunchao Zhang fs->numericFactFlops = flops; 18620dd8c0acSJunchao Zhang } 1863da112707SJunchao Zhang fact->ops->choleskyfactornumeric = MatICCFactorNumeric_SeqAIJCUSPARSE_ICC0; 18643ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1865da112707SJunchao Zhang } 1866da112707SJunchao Zhang #endif 1867da112707SJunchao Zhang 1868d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatILUFactorSymbolic_SeqAIJCUSPARSE(Mat B, Mat A, IS isrow, IS iscol, const MatFactorInfo *info) 1869d71ae5a4SJacob Faibussowitsch { 1870da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors *)B->spptr; 1871da112707SJunchao Zhang 1872da112707SJunchao Zhang PetscFunctionBegin; 1873da112707SJunchao Zhang #if CUSPARSE_VERSION >= 11500 1874bc996fdcSJunchao Zhang PetscBool row_identity = PETSC_FALSE, col_identity = PETSC_FALSE; 1875bc996fdcSJunchao Zhang if (cusparseTriFactors->factorizeOnDevice) { 1876da112707SJunchao Zhang PetscCall(ISIdentity(isrow, &row_identity)); 1877da112707SJunchao Zhang PetscCall(ISIdentity(iscol, &col_identity)); 1878bc996fdcSJunchao Zhang } 1879da112707SJunchao Zhang if (!info->levels && row_identity && col_identity) { 1880da112707SJunchao Zhang PetscCall(MatILUFactorSymbolic_SeqAIJCUSPARSE_ILU0(B, A, isrow, iscol, info)); 1881da112707SJunchao Zhang } else 1882da112707SJunchao Zhang #endif 1883da112707SJunchao Zhang { 1884da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors)); 1885da112707SJunchao Zhang PetscCall(MatILUFactorSymbolic_SeqAIJ(B, A, isrow, iscol, info)); 1886da112707SJunchao Zhang B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJCUSPARSE; 1887da112707SJunchao Zhang } 18883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1889da112707SJunchao Zhang } 1890da112707SJunchao Zhang 1891d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatLUFactorSymbolic_SeqAIJCUSPARSE(Mat B, Mat A, IS isrow, IS iscol, const MatFactorInfo *info) 1892d71ae5a4SJacob Faibussowitsch { 1893da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors *)B->spptr; 1894da112707SJunchao Zhang 1895da112707SJunchao Zhang PetscFunctionBegin; 1896da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors)); 1897da112707SJunchao Zhang PetscCall(MatLUFactorSymbolic_SeqAIJ(B, A, isrow, iscol, info)); 1898da112707SJunchao Zhang B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJCUSPARSE; 18993ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1900da112707SJunchao Zhang } 1901da112707SJunchao Zhang 1902d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatICCFactorSymbolic_SeqAIJCUSPARSE(Mat B, Mat A, IS perm, const MatFactorInfo *info) 1903d71ae5a4SJacob Faibussowitsch { 1904da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors *)B->spptr; 1905da112707SJunchao Zhang 1906da112707SJunchao Zhang PetscFunctionBegin; 1907da112707SJunchao Zhang #if CUSPARSE_VERSION >= 11500 1908bc996fdcSJunchao Zhang PetscBool perm_identity = PETSC_FALSE; 1909bc996fdcSJunchao Zhang if (cusparseTriFactors->factorizeOnDevice) PetscCall(ISIdentity(perm, &perm_identity)); 1910da112707SJunchao Zhang if (!info->levels && perm_identity) { 1911da112707SJunchao Zhang PetscCall(MatICCFactorSymbolic_SeqAIJCUSPARSE_ICC0(B, A, perm, info)); 1912da112707SJunchao Zhang } else 1913da112707SJunchao Zhang #endif 1914da112707SJunchao Zhang { 1915da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors)); 1916da112707SJunchao Zhang PetscCall(MatICCFactorSymbolic_SeqAIJ(B, A, perm, info)); 1917da112707SJunchao Zhang B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJCUSPARSE; 1918da112707SJunchao Zhang } 19193ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1920da112707SJunchao Zhang } 1921da112707SJunchao Zhang 1922d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatCholeskyFactorSymbolic_SeqAIJCUSPARSE(Mat B, Mat A, IS perm, const MatFactorInfo *info) 1923d71ae5a4SJacob Faibussowitsch { 1924da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors *)B->spptr; 1925da112707SJunchao Zhang 1926da112707SJunchao Zhang PetscFunctionBegin; 1927da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors)); 1928da112707SJunchao Zhang PetscCall(MatCholeskyFactorSymbolic_SeqAIJ(B, A, perm, info)); 1929da112707SJunchao Zhang B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJCUSPARSE; 19303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1931da112707SJunchao Zhang } 1932da112707SJunchao Zhang 19338eb1d50fSPierre Jolivet PetscErrorCode MatFactorGetSolverType_seqaij_cusparse(Mat, MatSolverType *type) 1934d71ae5a4SJacob Faibussowitsch { 1935841d4cb1SJunchao Zhang PetscFunctionBegin; 1936841d4cb1SJunchao Zhang *type = MATSOLVERCUSPARSE; 19373ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1938841d4cb1SJunchao Zhang } 1939841d4cb1SJunchao Zhang 1940841d4cb1SJunchao Zhang /*MC 1941841d4cb1SJunchao Zhang MATSOLVERCUSPARSE = "cusparse" - A matrix type providing triangular solvers for seq matrices 194211a5261eSBarry Smith on a single GPU of type, `MATSEQAIJCUSPARSE`. Currently supported 1943841d4cb1SJunchao Zhang algorithms are ILU(k) and ICC(k). Typically, deeper factorizations (larger k) results in poorer 1944841d4cb1SJunchao Zhang performance in the triangular solves. Full LU, and Cholesky decompositions can be solved through the 194511a5261eSBarry Smith CuSPARSE triangular solve algorithm. However, the performance can be quite poor and thus these 1946841d4cb1SJunchao Zhang algorithms are not recommended. This class does NOT support direct solver operations. 1947841d4cb1SJunchao Zhang 1948841d4cb1SJunchao Zhang Level: beginner 1949841d4cb1SJunchao Zhang 19502ef1f0ffSBarry Smith .seealso: [](chapter_matrices), `Mat`, `MATSEQAIJCUSPARSE`, `PCFactorSetMatSolverType()`, `MatSolverType`, `MatCreateSeqAIJCUSPARSE()`, 19512ef1f0ffSBarry Smith `MATAIJCUSPARSE`, `MatCreateAIJCUSPARSE()`, `MatCUSPARSESetFormat()`, `MatCUSPARSEStorageFormat`, `MatCUSPARSEFormatOperation` 1952841d4cb1SJunchao Zhang M*/ 1953841d4cb1SJunchao Zhang 1954d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MatGetFactor_seqaijcusparse_cusparse(Mat A, MatFactorType ftype, Mat *B) 1955d71ae5a4SJacob Faibussowitsch { 1956841d4cb1SJunchao Zhang PetscInt n = A->rmap->n; 1957bc996fdcSJunchao Zhang PetscBool factOnDevice, factOnHost; 1958bc996fdcSJunchao Zhang char *prefix; 1959bc996fdcSJunchao Zhang char factPlace[32] = "device"; /* the default */ 1960841d4cb1SJunchao Zhang 1961841d4cb1SJunchao Zhang PetscFunctionBegin; 1962841d4cb1SJunchao Zhang PetscCall(MatCreate(PetscObjectComm((PetscObject)A), B)); 1963841d4cb1SJunchao Zhang PetscCall(MatSetSizes(*B, n, n, n, n)); 1964841d4cb1SJunchao Zhang (*B)->factortype = ftype; 1965841d4cb1SJunchao Zhang PetscCall(MatSetType(*B, MATSEQAIJCUSPARSE)); 1966841d4cb1SJunchao Zhang 1967bc996fdcSJunchao Zhang prefix = (*B)->factorprefix ? (*B)->factorprefix : ((PetscObject)A)->prefix; 1968bc996fdcSJunchao Zhang PetscOptionsBegin(PetscObjectComm((PetscObject)(*B)), prefix, "MatGetFactor", "Mat"); 1969bc996fdcSJunchao Zhang PetscCall(PetscOptionsString("-mat_factor_bind_factorization", "Do matrix factorization on host or device when possible", "MatGetFactor", NULL, factPlace, sizeof(factPlace), NULL)); 1970bc996fdcSJunchao Zhang PetscOptionsEnd(); 1971bc996fdcSJunchao Zhang PetscCall(PetscStrcasecmp("device", factPlace, &factOnDevice)); 1972bc996fdcSJunchao Zhang PetscCall(PetscStrcasecmp("host", factPlace, &factOnHost)); 1973bc996fdcSJunchao Zhang PetscCheck(factOnDevice || factOnHost, PetscObjectComm((PetscObject)(*B)), PETSC_ERR_ARG_OUTOFRANGE, "Wrong option %s to -mat_factor_bind_factorization <string>. Only host and device are allowed", factPlace); 1974bc996fdcSJunchao Zhang ((Mat_SeqAIJCUSPARSETriFactors *)(*B)->spptr)->factorizeOnDevice = factOnDevice; 1975bc996fdcSJunchao Zhang 1976841d4cb1SJunchao Zhang if (A->boundtocpu && A->bindingpropagates) PetscCall(MatBindToCPU(*B, PETSC_TRUE)); 1977841d4cb1SJunchao Zhang if (ftype == MAT_FACTOR_LU || ftype == MAT_FACTOR_ILU || ftype == MAT_FACTOR_ILUDT) { 1978841d4cb1SJunchao Zhang PetscCall(MatSetBlockSizesFromMats(*B, A, A)); 1979841d4cb1SJunchao Zhang if (!A->boundtocpu) { 1980841d4cb1SJunchao Zhang (*B)->ops->ilufactorsymbolic = MatILUFactorSymbolic_SeqAIJCUSPARSE; 1981841d4cb1SJunchao Zhang (*B)->ops->lufactorsymbolic = MatLUFactorSymbolic_SeqAIJCUSPARSE; 1982841d4cb1SJunchao Zhang } else { 1983841d4cb1SJunchao Zhang (*B)->ops->ilufactorsymbolic = MatILUFactorSymbolic_SeqAIJ; 1984841d4cb1SJunchao Zhang (*B)->ops->lufactorsymbolic = MatLUFactorSymbolic_SeqAIJ; 1985841d4cb1SJunchao Zhang } 1986841d4cb1SJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGND, (char **)&(*B)->preferredordering[MAT_FACTOR_LU])); 1987841d4cb1SJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGNATURAL, (char **)&(*B)->preferredordering[MAT_FACTOR_ILU])); 1988841d4cb1SJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGNATURAL, (char **)&(*B)->preferredordering[MAT_FACTOR_ILUDT])); 1989841d4cb1SJunchao Zhang } else if (ftype == MAT_FACTOR_CHOLESKY || ftype == MAT_FACTOR_ICC) { 1990841d4cb1SJunchao Zhang if (!A->boundtocpu) { 1991841d4cb1SJunchao Zhang (*B)->ops->iccfactorsymbolic = MatICCFactorSymbolic_SeqAIJCUSPARSE; 1992841d4cb1SJunchao Zhang (*B)->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SeqAIJCUSPARSE; 1993841d4cb1SJunchao Zhang } else { 1994841d4cb1SJunchao Zhang (*B)->ops->iccfactorsymbolic = MatICCFactorSymbolic_SeqAIJ; 1995841d4cb1SJunchao Zhang (*B)->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SeqAIJ; 1996841d4cb1SJunchao Zhang } 1997841d4cb1SJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGND, (char **)&(*B)->preferredordering[MAT_FACTOR_CHOLESKY])); 1998841d4cb1SJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGNATURAL, (char **)&(*B)->preferredordering[MAT_FACTOR_ICC])); 1999841d4cb1SJunchao Zhang } else SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Factor type not supported for CUSPARSE Matrix Types"); 2000841d4cb1SJunchao Zhang 2001841d4cb1SJunchao Zhang PetscCall(MatSeqAIJSetPreallocation(*B, MAT_SKIP_ALLOCATION, NULL)); 2002841d4cb1SJunchao Zhang (*B)->canuseordering = PETSC_TRUE; 2003841d4cb1SJunchao Zhang PetscCall(PetscObjectComposeFunction((PetscObject)(*B), "MatFactorGetSolverType_C", MatFactorGetSolverType_seqaij_cusparse)); 20043ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2005841d4cb1SJunchao Zhang } 2006841d4cb1SJunchao Zhang 2007d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJCUSPARSECopyFromGPU(Mat A) 2008d71ae5a4SJacob Faibussowitsch { 20097e8381f9SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 20107e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE *)A->spptr; 20110dd8c0acSJunchao Zhang #if CUSPARSE_VERSION >= 13500 2012da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *fs = (Mat_SeqAIJCUSPARSETriFactors *)A->spptr; 20130dd8c0acSJunchao Zhang #endif 20147e8381f9SStefano Zampini 20157e8381f9SStefano Zampini PetscFunctionBegin; 20167e8381f9SStefano Zampini if (A->offloadmask == PETSC_OFFLOAD_GPU) { 20179566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSECopyFromGPU, A, 0, 0, 0)); 2018da112707SJunchao Zhang if (A->factortype == MAT_FACTOR_NONE) { 2019da112707SJunchao Zhang CsrMatrix *matrix = (CsrMatrix *)cusp->mat->mat; 20209566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(a->a, matrix->values->data().get(), a->nz * sizeof(PetscScalar), cudaMemcpyDeviceToHost)); 2021da112707SJunchao Zhang } 2022da112707SJunchao Zhang #if CUSPARSE_VERSION >= 13500 2023da112707SJunchao Zhang else if (fs->csrVal) { 2024da112707SJunchao Zhang /* We have a factorized matrix on device and are able to copy it to host */ 2025da112707SJunchao Zhang PetscCallCUDA(cudaMemcpy(a->a, fs->csrVal, a->nz * sizeof(PetscScalar), cudaMemcpyDeviceToHost)); 2026da112707SJunchao Zhang } 2027da112707SJunchao Zhang #endif 20289371c9d4SSatish Balay else 20299371c9d4SSatish Balay SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "No support for copying this type of factorized matrix from device to host"); 20309566063dSJacob Faibussowitsch PetscCall(PetscLogGpuToCpu(a->nz * sizeof(PetscScalar))); 20319566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSECopyFromGPU, A, 0, 0, 0)); 20327e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_BOTH; 20337e8381f9SStefano Zampini } 20343ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 20357e8381f9SStefano Zampini } 20367e8381f9SStefano Zampini 2037d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJGetArray_SeqAIJCUSPARSE(Mat A, PetscScalar *array[]) 2038d71ae5a4SJacob Faibussowitsch { 20397e8381f9SStefano Zampini PetscFunctionBegin; 20409566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyFromGPU(A)); 204167a45760SJunchao Zhang *array = ((Mat_SeqAIJ *)A->data)->a; 20423ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 204367a45760SJunchao Zhang } 204467a45760SJunchao Zhang 2045d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJRestoreArray_SeqAIJCUSPARSE(Mat A, PetscScalar *array[]) 2046d71ae5a4SJacob Faibussowitsch { 204767a45760SJunchao Zhang PetscFunctionBegin; 20487e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_CPU; 204967a45760SJunchao Zhang *array = NULL; 20503ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 205167a45760SJunchao Zhang } 205267a45760SJunchao Zhang 2053d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJGetArrayRead_SeqAIJCUSPARSE(Mat A, const PetscScalar *array[]) 2054d71ae5a4SJacob Faibussowitsch { 205567a45760SJunchao Zhang PetscFunctionBegin; 20569566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyFromGPU(A)); 205767a45760SJunchao Zhang *array = ((Mat_SeqAIJ *)A->data)->a; 20583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 205967a45760SJunchao Zhang } 206067a45760SJunchao Zhang 20618eb1d50fSPierre Jolivet static PetscErrorCode MatSeqAIJRestoreArrayRead_SeqAIJCUSPARSE(Mat, const PetscScalar *array[]) 2062d71ae5a4SJacob Faibussowitsch { 206367a45760SJunchao Zhang PetscFunctionBegin; 206467a45760SJunchao Zhang *array = NULL; 20653ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 206667a45760SJunchao Zhang } 206767a45760SJunchao Zhang 2068d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJGetArrayWrite_SeqAIJCUSPARSE(Mat A, PetscScalar *array[]) 2069d71ae5a4SJacob Faibussowitsch { 207067a45760SJunchao Zhang PetscFunctionBegin; 207167a45760SJunchao Zhang *array = ((Mat_SeqAIJ *)A->data)->a; 20723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 207367a45760SJunchao Zhang } 207467a45760SJunchao Zhang 2075d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJRestoreArrayWrite_SeqAIJCUSPARSE(Mat A, PetscScalar *array[]) 2076d71ae5a4SJacob Faibussowitsch { 207767a45760SJunchao Zhang PetscFunctionBegin; 207867a45760SJunchao Zhang A->offloadmask = PETSC_OFFLOAD_CPU; 207967a45760SJunchao Zhang *array = NULL; 20803ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 20817e8381f9SStefano Zampini } 20827e8381f9SStefano Zampini 2083d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJGetCSRAndMemType_SeqAIJCUSPARSE(Mat A, const PetscInt **i, const PetscInt **j, PetscScalar **a, PetscMemType *mtype) 2084d71ae5a4SJacob Faibussowitsch { 20857ee59b9bSJunchao Zhang Mat_SeqAIJCUSPARSE *cusp; 20867ee59b9bSJunchao Zhang CsrMatrix *matrix; 20877ee59b9bSJunchao Zhang 20887ee59b9bSJunchao Zhang PetscFunctionBegin; 20897ee59b9bSJunchao Zhang PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 20907ee59b9bSJunchao Zhang PetscCheck(A->factortype == MAT_FACTOR_NONE, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix"); 20917ee59b9bSJunchao Zhang cusp = static_cast<Mat_SeqAIJCUSPARSE *>(A->spptr); 20927ee59b9bSJunchao Zhang PetscCheck(cusp != NULL, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "cusp is NULL"); 20937ee59b9bSJunchao Zhang matrix = (CsrMatrix *)cusp->mat->mat; 20947ee59b9bSJunchao Zhang 20957ee59b9bSJunchao Zhang if (i) { 20967ee59b9bSJunchao Zhang #if !defined(PETSC_USE_64BIT_INDICES) 20977ee59b9bSJunchao Zhang *i = matrix->row_offsets->data().get(); 20987ee59b9bSJunchao Zhang #else 20997ee59b9bSJunchao Zhang SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "cuSparse does not supported 64-bit indices"); 21007ee59b9bSJunchao Zhang #endif 21017ee59b9bSJunchao Zhang } 21027ee59b9bSJunchao Zhang if (j) { 21037ee59b9bSJunchao Zhang #if !defined(PETSC_USE_64BIT_INDICES) 21047ee59b9bSJunchao Zhang *j = matrix->column_indices->data().get(); 21057ee59b9bSJunchao Zhang #else 21067ee59b9bSJunchao Zhang SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "cuSparse does not supported 64-bit indices"); 21077ee59b9bSJunchao Zhang #endif 21087ee59b9bSJunchao Zhang } 21097ee59b9bSJunchao Zhang if (a) *a = matrix->values->data().get(); 21107ee59b9bSJunchao Zhang if (mtype) *mtype = PETSC_MEMTYPE_CUDA; 21113ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 21127ee59b9bSJunchao Zhang } 21137ee59b9bSJunchao Zhang 2114d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatSeqAIJCUSPARSECopyToGPU(Mat A) 2115d71ae5a4SJacob Faibussowitsch { 2116aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE *)A->spptr; 21177c700b8dSJunchao Zhang Mat_SeqAIJCUSPARSEMultStruct *matstruct = cusparsestruct->mat; 21189ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 2119213423ffSJunchao Zhang PetscInt m = A->rmap->n, *ii, *ridx, tmp; 2120aa372e3fSPaul Mullowney cusparseStatus_t stat; 2121abb89eb1SStefano Zampini PetscBool both = PETSC_TRUE; 21229ae82921SPaul Mullowney 21239ae82921SPaul Mullowney PetscFunctionBegin; 212428b400f6SJacob Faibussowitsch PetscCheck(!A->boundtocpu, PETSC_COMM_SELF, PETSC_ERR_GPU, "Cannot copy to GPU"); 2125c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 2126a49f1ed0SStefano Zampini if (A->nonzerostate == cusparsestruct->nonzerostate && cusparsestruct->format == MAT_CUSPARSE_CSR) { /* Copy values only */ 2127a49f1ed0SStefano Zampini CsrMatrix *matrix; 2128afb2bd1cSJunchao Zhang matrix = (CsrMatrix *)cusparsestruct->mat->mat; 212985ba7357SStefano Zampini 213008401ef6SPierre Jolivet PetscCheck(!a->nz || a->a, PETSC_COMM_SELF, PETSC_ERR_GPU, "Missing CSR values"); 21319566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSECopyToGPU, A, 0, 0, 0)); 2132afb2bd1cSJunchao Zhang matrix->values->assign(a->a, a->a + a->nz); 21339566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 21349566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu((a->nz) * sizeof(PetscScalar))); 21359566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSECopyToGPU, A, 0, 0, 0)); 21369566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(A, PETSC_FALSE)); 213734d6c7a5SJose E. Roman } else { 2138abb89eb1SStefano Zampini PetscInt nnz; 21399566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MAT_CUSPARSECopyToGPU, A, 0, 0, 0)); 21409566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEMultStruct_Destroy(&cusparsestruct->mat, cusparsestruct->format)); 21419566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(A, PETSC_TRUE)); 21427c700b8dSJunchao Zhang delete cusparsestruct->workVector; 214381902715SJunchao Zhang delete cusparsestruct->rowoffsets_gpu; 2144a49f1ed0SStefano Zampini cusparsestruct->workVector = NULL; 2145a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu = NULL; 21469ae82921SPaul Mullowney try { 21479ae82921SPaul Mullowney if (a->compressedrow.use) { 21489ae82921SPaul Mullowney m = a->compressedrow.nrows; 21499ae82921SPaul Mullowney ii = a->compressedrow.i; 21509ae82921SPaul Mullowney ridx = a->compressedrow.rindex; 21519ae82921SPaul Mullowney } else { 2152213423ffSJunchao Zhang m = A->rmap->n; 2153213423ffSJunchao Zhang ii = a->i; 2154e6e9a74fSStefano Zampini ridx = NULL; 21559ae82921SPaul Mullowney } 215608401ef6SPierre Jolivet PetscCheck(ii, PETSC_COMM_SELF, PETSC_ERR_GPU, "Missing CSR row data"); 21579371c9d4SSatish Balay if (!a->a) { 21589371c9d4SSatish Balay nnz = ii[m]; 21599371c9d4SSatish Balay both = PETSC_FALSE; 21609371c9d4SSatish Balay } else nnz = a->nz; 216108401ef6SPierre Jolivet PetscCheck(!nnz || a->j, PETSC_COMM_SELF, PETSC_ERR_GPU, "Missing CSR column data"); 21629ae82921SPaul Mullowney 216385ba7357SStefano Zampini /* create cusparse matrix */ 2164abb89eb1SStefano Zampini cusparsestruct->nrows = m; 2165aa372e3fSPaul Mullowney matstruct = new Mat_SeqAIJCUSPARSEMultStruct; 21669566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&matstruct->descr)); 21679566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(matstruct->descr, CUSPARSE_INDEX_BASE_ZERO)); 21689566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(matstruct->descr, CUSPARSE_MATRIX_TYPE_GENERAL)); 21699ae82921SPaul Mullowney 21709566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(matstruct->alpha_one), sizeof(PetscScalar))); 21719566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(matstruct->beta_zero), sizeof(PetscScalar))); 21729566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(matstruct->beta_one), sizeof(PetscScalar))); 21739566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(matstruct->alpha_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar), cudaMemcpyHostToDevice)); 21749566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(matstruct->beta_zero, &PETSC_CUSPARSE_ZERO, sizeof(PetscScalar), cudaMemcpyHostToDevice)); 21759566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(matstruct->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar), cudaMemcpyHostToDevice)); 21769566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetPointerMode(cusparsestruct->handle, CUSPARSE_POINTER_MODE_DEVICE)); 2177b06137fdSPaul Mullowney 2178aa372e3fSPaul Mullowney /* Build a hybrid/ellpack matrix if this option is chosen for the storage */ 2179aa372e3fSPaul Mullowney if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 2180aa372e3fSPaul Mullowney /* set the matrix */ 2181afb2bd1cSJunchao Zhang CsrMatrix *mat = new CsrMatrix; 2182afb2bd1cSJunchao Zhang mat->num_rows = m; 2183afb2bd1cSJunchao Zhang mat->num_cols = A->cmap->n; 2184abb89eb1SStefano Zampini mat->num_entries = nnz; 2185afb2bd1cSJunchao Zhang mat->row_offsets = new THRUSTINTARRAY32(m + 1); 2186afb2bd1cSJunchao Zhang mat->row_offsets->assign(ii, ii + m + 1); 21879ae82921SPaul Mullowney 2188abb89eb1SStefano Zampini mat->column_indices = new THRUSTINTARRAY32(nnz); 2189abb89eb1SStefano Zampini mat->column_indices->assign(a->j, a->j + nnz); 2190aa372e3fSPaul Mullowney 2191abb89eb1SStefano Zampini mat->values = new THRUSTARRAY(nnz); 2192abb89eb1SStefano Zampini if (a->a) mat->values->assign(a->a, a->a + nnz); 2193aa372e3fSPaul Mullowney 2194aa372e3fSPaul Mullowney /* assign the pointer */ 2195afb2bd1cSJunchao Zhang matstruct->mat = mat; 2196afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 2197afb2bd1cSJunchao Zhang if (mat->num_rows) { /* cusparse errors on empty matrices! */ 21989371c9d4SSatish Balay stat = cusparseCreateCsr(&matstruct->matDescr, mat->num_rows, mat->num_cols, mat->num_entries, mat->row_offsets->data().get(), mat->column_indices->data().get(), mat->values->data().get(), CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, /* row offset, col idx types due to THRUSTINTARRAY32 */ 21999371c9d4SSatish Balay CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype); 22009371c9d4SSatish Balay PetscCallCUSPARSE(stat); 2201afb2bd1cSJunchao Zhang } 2202afb2bd1cSJunchao Zhang #endif 2203aa372e3fSPaul Mullowney } else if (cusparsestruct->format == MAT_CUSPARSE_ELL || cusparsestruct->format == MAT_CUSPARSE_HYB) { 2204afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 2205afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 2206afb2bd1cSJunchao Zhang #else 2207afb2bd1cSJunchao Zhang CsrMatrix *mat = new CsrMatrix; 2208afb2bd1cSJunchao Zhang mat->num_rows = m; 2209afb2bd1cSJunchao Zhang mat->num_cols = A->cmap->n; 2210abb89eb1SStefano Zampini mat->num_entries = nnz; 2211afb2bd1cSJunchao Zhang mat->row_offsets = new THRUSTINTARRAY32(m + 1); 2212afb2bd1cSJunchao Zhang mat->row_offsets->assign(ii, ii + m + 1); 2213aa372e3fSPaul Mullowney 2214abb89eb1SStefano Zampini mat->column_indices = new THRUSTINTARRAY32(nnz); 2215abb89eb1SStefano Zampini mat->column_indices->assign(a->j, a->j + nnz); 2216aa372e3fSPaul Mullowney 2217abb89eb1SStefano Zampini mat->values = new THRUSTARRAY(nnz); 2218abb89eb1SStefano Zampini if (a->a) mat->values->assign(a->a, a->a + nnz); 2219aa372e3fSPaul Mullowney 2220aa372e3fSPaul Mullowney cusparseHybMat_t hybMat; 22219566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateHybMat(&hybMat)); 22229371c9d4SSatish Balay cusparseHybPartition_t partition = cusparsestruct->format == MAT_CUSPARSE_ELL ? CUSPARSE_HYB_PARTITION_MAX : CUSPARSE_HYB_PARTITION_AUTO; 22239371c9d4SSatish Balay stat = cusparse_csr2hyb(cusparsestruct->handle, mat->num_rows, mat->num_cols, matstruct->descr, mat->values->data().get(), mat->row_offsets->data().get(), mat->column_indices->data().get(), hybMat, 0, partition); 22249371c9d4SSatish Balay PetscCallCUSPARSE(stat); 2225aa372e3fSPaul Mullowney /* assign the pointer */ 2226aa372e3fSPaul Mullowney matstruct->mat = hybMat; 2227aa372e3fSPaul Mullowney 2228afb2bd1cSJunchao Zhang if (mat) { 2229afb2bd1cSJunchao Zhang if (mat->values) delete (THRUSTARRAY *)mat->values; 2230afb2bd1cSJunchao Zhang if (mat->column_indices) delete (THRUSTINTARRAY32 *)mat->column_indices; 2231afb2bd1cSJunchao Zhang if (mat->row_offsets) delete (THRUSTINTARRAY32 *)mat->row_offsets; 2232afb2bd1cSJunchao Zhang delete (CsrMatrix *)mat; 2233087f3262SPaul Mullowney } 2234afb2bd1cSJunchao Zhang #endif 2235087f3262SPaul Mullowney } 2236ca45077fSPaul Mullowney 2237aa372e3fSPaul Mullowney /* assign the compressed row indices */ 2238213423ffSJunchao Zhang if (a->compressedrow.use) { 2239213423ffSJunchao Zhang cusparsestruct->workVector = new THRUSTARRAY(m); 2240aa372e3fSPaul Mullowney matstruct->cprowIndices = new THRUSTINTARRAY(m); 2241aa372e3fSPaul Mullowney matstruct->cprowIndices->assign(ridx, ridx + m); 2242213423ffSJunchao Zhang tmp = m; 2243213423ffSJunchao Zhang } else { 2244213423ffSJunchao Zhang cusparsestruct->workVector = NULL; 2245213423ffSJunchao Zhang matstruct->cprowIndices = NULL; 2246213423ffSJunchao Zhang tmp = 0; 2247213423ffSJunchao Zhang } 22489566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(((m + 1) + (a->nz)) * sizeof(int) + tmp * sizeof(PetscInt) + (3 + (a->nz)) * sizeof(PetscScalar))); 2249aa372e3fSPaul Mullowney 2250aa372e3fSPaul Mullowney /* assign the pointer */ 2251aa372e3fSPaul Mullowney cusparsestruct->mat = matstruct; 2252d71ae5a4SJacob Faibussowitsch } catch (char *ex) { 2253d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_LIB, "CUSPARSE error: %s", ex); 2254d71ae5a4SJacob Faibussowitsch } 22559566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 22569566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MAT_CUSPARSECopyToGPU, A, 0, 0, 0)); 225734d6c7a5SJose E. Roman cusparsestruct->nonzerostate = A->nonzerostate; 225834d6c7a5SJose E. Roman } 2259abb89eb1SStefano Zampini if (both) A->offloadmask = PETSC_OFFLOAD_BOTH; 22609ae82921SPaul Mullowney } 22613ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 22629ae82921SPaul Mullowney } 22639ae82921SPaul Mullowney 22649371c9d4SSatish Balay struct VecCUDAPlusEquals { 2265aa372e3fSPaul Mullowney template <typename Tuple> 2266d71ae5a4SJacob Faibussowitsch __host__ __device__ void operator()(Tuple t) 2267d71ae5a4SJacob Faibussowitsch { 2268aa372e3fSPaul Mullowney thrust::get<1>(t) = thrust::get<1>(t) + thrust::get<0>(t); 2269aa372e3fSPaul Mullowney } 2270aa372e3fSPaul Mullowney }; 2271aa372e3fSPaul Mullowney 22729371c9d4SSatish Balay struct VecCUDAEquals { 22737e8381f9SStefano Zampini template <typename Tuple> 2274d71ae5a4SJacob Faibussowitsch __host__ __device__ void operator()(Tuple t) 2275d71ae5a4SJacob Faibussowitsch { 22767e8381f9SStefano Zampini thrust::get<1>(t) = thrust::get<0>(t); 22777e8381f9SStefano Zampini } 22787e8381f9SStefano Zampini }; 22797e8381f9SStefano Zampini 22809371c9d4SSatish Balay struct VecCUDAEqualsReverse { 2281e6e9a74fSStefano Zampini template <typename Tuple> 2282d71ae5a4SJacob Faibussowitsch __host__ __device__ void operator()(Tuple t) 2283d71ae5a4SJacob Faibussowitsch { 2284e6e9a74fSStefano Zampini thrust::get<0>(t) = thrust::get<1>(t); 2285e6e9a74fSStefano Zampini } 2286e6e9a74fSStefano Zampini }; 2287e6e9a74fSStefano Zampini 2288afb2bd1cSJunchao Zhang struct MatMatCusparse { 2289ccdfe979SStefano Zampini PetscBool cisdense; 2290ccdfe979SStefano Zampini PetscScalar *Bt; 2291ccdfe979SStefano Zampini Mat X; 2292fcdce8c4SStefano Zampini PetscBool reusesym; /* Cusparse does not have split symbolic and numeric phases for sparse matmat operations */ 2293fcdce8c4SStefano Zampini PetscLogDouble flops; 2294fcdce8c4SStefano Zampini CsrMatrix *Bcsr; 2295b4285af6SJunchao Zhang 2296afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 2297fcdce8c4SStefano Zampini cusparseSpMatDescr_t matSpBDescr; 2298afb2bd1cSJunchao Zhang PetscBool initialized; /* C = alpha op(A) op(B) + beta C */ 2299afb2bd1cSJunchao Zhang cusparseDnMatDescr_t matBDescr; 2300afb2bd1cSJunchao Zhang cusparseDnMatDescr_t matCDescr; 2301afb2bd1cSJunchao Zhang PetscInt Blda, Clda; /* Record leading dimensions of B and C here to detect changes*/ 2302b4285af6SJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 4, 0) 2303b4285af6SJunchao Zhang void *dBuffer4; 2304b4285af6SJunchao Zhang void *dBuffer5; 2305b4285af6SJunchao Zhang #endif 2306fcdce8c4SStefano Zampini size_t mmBufferSize; 2307fcdce8c4SStefano Zampini void *mmBuffer; 2308fcdce8c4SStefano Zampini void *mmBuffer2; /* SpGEMM WorkEstimation buffer */ 2309fcdce8c4SStefano Zampini cusparseSpGEMMDescr_t spgemmDesc; 2310afb2bd1cSJunchao Zhang #endif 2311afb2bd1cSJunchao Zhang }; 2312ccdfe979SStefano Zampini 2313d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDestroy_MatMatCusparse(void *data) 2314d71ae5a4SJacob Faibussowitsch { 2315ccdfe979SStefano Zampini MatMatCusparse *mmdata = (MatMatCusparse *)data; 2316ccdfe979SStefano Zampini 2317ccdfe979SStefano Zampini PetscFunctionBegin; 23189566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(mmdata->Bt)); 2319fcdce8c4SStefano Zampini delete mmdata->Bcsr; 2320afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 23219566063dSJacob Faibussowitsch if (mmdata->matSpBDescr) PetscCallCUSPARSE(cusparseDestroySpMat(mmdata->matSpBDescr)); 23229566063dSJacob Faibussowitsch if (mmdata->matBDescr) PetscCallCUSPARSE(cusparseDestroyDnMat(mmdata->matBDescr)); 23239566063dSJacob Faibussowitsch if (mmdata->matCDescr) PetscCallCUSPARSE(cusparseDestroyDnMat(mmdata->matCDescr)); 23249566063dSJacob Faibussowitsch if (mmdata->spgemmDesc) PetscCallCUSPARSE(cusparseSpGEMM_destroyDescr(mmdata->spgemmDesc)); 2325b4285af6SJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 4, 0) 23269566063dSJacob Faibussowitsch if (mmdata->dBuffer4) PetscCallCUDA(cudaFree(mmdata->dBuffer4)); 23279566063dSJacob Faibussowitsch if (mmdata->dBuffer5) PetscCallCUDA(cudaFree(mmdata->dBuffer5)); 2328b4285af6SJunchao Zhang #endif 23299566063dSJacob Faibussowitsch if (mmdata->mmBuffer) PetscCallCUDA(cudaFree(mmdata->mmBuffer)); 23309566063dSJacob Faibussowitsch if (mmdata->mmBuffer2) PetscCallCUDA(cudaFree(mmdata->mmBuffer2)); 2331afb2bd1cSJunchao Zhang #endif 23329566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mmdata->X)); 23339566063dSJacob Faibussowitsch PetscCall(PetscFree(data)); 23343ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2335ccdfe979SStefano Zampini } 2336ccdfe979SStefano Zampini 23374742e46bSJacob Faibussowitsch #include <../src/mat/impls/dense/seq/dense.h> // MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Internal() 2338ccdfe979SStefano Zampini 2339d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductNumeric_SeqAIJCUSPARSE_SeqDENSECUDA(Mat C) 2340d71ae5a4SJacob Faibussowitsch { 2341ccdfe979SStefano Zampini Mat_Product *product = C->product; 2342ccdfe979SStefano Zampini Mat A, B; 2343afb2bd1cSJunchao Zhang PetscInt m, n, blda, clda; 2344ccdfe979SStefano Zampini PetscBool flg, biscuda; 2345ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSE *cusp; 2346ccdfe979SStefano Zampini cusparseStatus_t stat; 2347ccdfe979SStefano Zampini cusparseOperation_t opA; 2348ccdfe979SStefano Zampini const PetscScalar *barray; 2349ccdfe979SStefano Zampini PetscScalar *carray; 2350ccdfe979SStefano Zampini MatMatCusparse *mmdata; 2351ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *mat; 2352ccdfe979SStefano Zampini CsrMatrix *csrmat; 2353ccdfe979SStefano Zampini 2354ccdfe979SStefano Zampini PetscFunctionBegin; 2355ccdfe979SStefano Zampini MatCheckProduct(C, 1); 235628b400f6SJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Product data empty"); 2357ccdfe979SStefano Zampini mmdata = (MatMatCusparse *)product->data; 2358ccdfe979SStefano Zampini A = product->A; 2359ccdfe979SStefano Zampini B = product->B; 23609566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQAIJCUSPARSE, &flg)); 236128b400f6SJacob Faibussowitsch PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_GPU, "Not for type %s", ((PetscObject)A)->type_name); 2362ccdfe979SStefano Zampini /* currently CopyToGpu does not copy if the matrix is bound to CPU 2363ccdfe979SStefano Zampini Instead of silently accepting the wrong answer, I prefer to raise the error */ 236428b400f6SJacob Faibussowitsch PetscCheck(!A->boundtocpu, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONG, "Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 23659566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 2366ccdfe979SStefano Zampini cusp = (Mat_SeqAIJCUSPARSE *)A->spptr; 2367ccdfe979SStefano Zampini switch (product->type) { 2368ccdfe979SStefano Zampini case MATPRODUCT_AB: 2369ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 2370ccdfe979SStefano Zampini mat = cusp->mat; 2371ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2372ccdfe979SStefano Zampini m = A->rmap->n; 2373ccdfe979SStefano Zampini n = B->cmap->n; 2374ccdfe979SStefano Zampini break; 2375ccdfe979SStefano Zampini case MATPRODUCT_AtB: 23761a2c6b5cSJunchao Zhang if (!A->form_explicit_transpose) { 2377e6e9a74fSStefano Zampini mat = cusp->mat; 2378e6e9a74fSStefano Zampini opA = CUSPARSE_OPERATION_TRANSPOSE; 2379e6e9a74fSStefano Zampini } else { 23809566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEFormExplicitTranspose(A)); 2381ccdfe979SStefano Zampini mat = cusp->matTranspose; 2382ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2383e6e9a74fSStefano Zampini } 2384ccdfe979SStefano Zampini m = A->cmap->n; 2385ccdfe979SStefano Zampini n = B->cmap->n; 2386ccdfe979SStefano Zampini break; 2387ccdfe979SStefano Zampini case MATPRODUCT_ABt: 2388ccdfe979SStefano Zampini case MATPRODUCT_RARt: 2389ccdfe979SStefano Zampini mat = cusp->mat; 2390ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2391ccdfe979SStefano Zampini m = A->rmap->n; 2392ccdfe979SStefano Zampini n = B->rmap->n; 2393ccdfe979SStefano Zampini break; 2394d71ae5a4SJacob Faibussowitsch default: 2395d71ae5a4SJacob Faibussowitsch SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Unsupported product type %s", MatProductTypes[product->type]); 2396ccdfe979SStefano Zampini } 239728b400f6SJacob Faibussowitsch PetscCheck(mat, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Missing Mat_SeqAIJCUSPARSEMultStruct"); 2398ccdfe979SStefano Zampini csrmat = (CsrMatrix *)mat->mat; 2399ccdfe979SStefano Zampini /* if the user passed a CPU matrix, copy the data to the GPU */ 24009566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)B, MATSEQDENSECUDA, &biscuda)); 24019566063dSJacob Faibussowitsch if (!biscuda) PetscCall(MatConvert(B, MATSEQDENSECUDA, MAT_INPLACE_MATRIX, &B)); 2402cd3f9d89SJunchao Zhang PetscCall(MatDenseGetArrayReadAndMemType(B, &barray, nullptr)); 2403afb2bd1cSJunchao Zhang 24049566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(B, &blda)); 2405c8378d12SStefano Zampini if (product->type == MATPRODUCT_RARt || product->type == MATPRODUCT_PtAP) { 2406cd3f9d89SJunchao Zhang PetscCall(MatDenseGetArrayWriteAndMemType(mmdata->X, &carray, nullptr)); 24079566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mmdata->X, &clda)); 2408c8378d12SStefano Zampini } else { 2409cd3f9d89SJunchao Zhang PetscCall(MatDenseGetArrayWriteAndMemType(C, &carray, nullptr)); 24109566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(C, &clda)); 2411c8378d12SStefano Zampini } 2412c8378d12SStefano Zampini 24139566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 2414afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 2415afb2bd1cSJunchao Zhang cusparseOperation_t opB = (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) ? CUSPARSE_OPERATION_TRANSPOSE : CUSPARSE_OPERATION_NON_TRANSPOSE; 2416a5b23f4aSJose E. Roman /* (re)allocate mmBuffer if not initialized or LDAs are different */ 2417afb2bd1cSJunchao Zhang if (!mmdata->initialized || mmdata->Blda != blda || mmdata->Clda != clda) { 2418fcdce8c4SStefano Zampini size_t mmBufferSize; 24199371c9d4SSatish Balay if (mmdata->initialized && mmdata->Blda != blda) { 24209371c9d4SSatish Balay PetscCallCUSPARSE(cusparseDestroyDnMat(mmdata->matBDescr)); 24219371c9d4SSatish Balay mmdata->matBDescr = NULL; 24229371c9d4SSatish Balay } 2423afb2bd1cSJunchao Zhang if (!mmdata->matBDescr) { 24249566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateDnMat(&mmdata->matBDescr, B->rmap->n, B->cmap->n, blda, (void *)barray, cusparse_scalartype, CUSPARSE_ORDER_COL)); 2425afb2bd1cSJunchao Zhang mmdata->Blda = blda; 2426afb2bd1cSJunchao Zhang } 2427c8378d12SStefano Zampini 24289371c9d4SSatish Balay if (mmdata->initialized && mmdata->Clda != clda) { 24299371c9d4SSatish Balay PetscCallCUSPARSE(cusparseDestroyDnMat(mmdata->matCDescr)); 24309371c9d4SSatish Balay mmdata->matCDescr = NULL; 24319371c9d4SSatish Balay } 2432afb2bd1cSJunchao Zhang if (!mmdata->matCDescr) { /* matCDescr is for C or mmdata->X */ 24339566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateDnMat(&mmdata->matCDescr, m, n, clda, (void *)carray, cusparse_scalartype, CUSPARSE_ORDER_COL)); 2434afb2bd1cSJunchao Zhang mmdata->Clda = clda; 2435afb2bd1cSJunchao Zhang } 2436afb2bd1cSJunchao Zhang 2437afb2bd1cSJunchao Zhang if (!mat->matDescr) { 24389371c9d4SSatish Balay stat = cusparseCreateCsr(&mat->matDescr, csrmat->num_rows, csrmat->num_cols, csrmat->num_entries, csrmat->row_offsets->data().get(), csrmat->column_indices->data().get(), csrmat->values->data().get(), CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, /* row offset, col idx types due to THRUSTINTARRAY32 */ 24399371c9d4SSatish Balay CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype); 24409371c9d4SSatish Balay PetscCallCUSPARSE(stat); 2441afb2bd1cSJunchao Zhang } 24429371c9d4SSatish Balay stat = cusparseSpMM_bufferSize(cusp->handle, opA, opB, mat->alpha_one, mat->matDescr, mmdata->matBDescr, mat->beta_zero, mmdata->matCDescr, cusparse_scalartype, cusp->spmmAlg, &mmBufferSize); 24439371c9d4SSatish Balay PetscCallCUSPARSE(stat); 2444fcdce8c4SStefano Zampini if ((mmdata->mmBuffer && mmdata->mmBufferSize < mmBufferSize) || !mmdata->mmBuffer) { 24459566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(mmdata->mmBuffer)); 24469566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&mmdata->mmBuffer, mmBufferSize)); 2447fcdce8c4SStefano Zampini mmdata->mmBufferSize = mmBufferSize; 2448fcdce8c4SStefano Zampini } 2449afb2bd1cSJunchao Zhang mmdata->initialized = PETSC_TRUE; 2450afb2bd1cSJunchao Zhang } else { 2451afb2bd1cSJunchao Zhang /* to be safe, always update pointers of the mats */ 24529566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSpMatSetValues(mat->matDescr, csrmat->values->data().get())); 24539566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseDnMatSetValues(mmdata->matBDescr, (void *)barray)); 24549566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseDnMatSetValues(mmdata->matCDescr, (void *)carray)); 2455afb2bd1cSJunchao Zhang } 2456afb2bd1cSJunchao Zhang 2457afb2bd1cSJunchao Zhang /* do cusparseSpMM, which supports transpose on B */ 24589371c9d4SSatish Balay stat = cusparseSpMM(cusp->handle, opA, opB, mat->alpha_one, mat->matDescr, mmdata->matBDescr, mat->beta_zero, mmdata->matCDescr, cusparse_scalartype, cusp->spmmAlg, mmdata->mmBuffer); 24599371c9d4SSatish Balay PetscCallCUSPARSE(stat); 2460afb2bd1cSJunchao Zhang #else 2461afb2bd1cSJunchao Zhang PetscInt k; 2462afb2bd1cSJunchao Zhang /* cusparseXcsrmm does not support transpose on B */ 2463ccdfe979SStefano Zampini if (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) { 2464ccdfe979SStefano Zampini cublasHandle_t cublasv2handle; 2465ccdfe979SStefano Zampini cublasStatus_t cerr; 2466ccdfe979SStefano Zampini 24679566063dSJacob Faibussowitsch PetscCall(PetscCUBLASGetHandle(&cublasv2handle)); 24689371c9d4SSatish Balay cerr = cublasXgeam(cublasv2handle, CUBLAS_OP_T, CUBLAS_OP_T, B->cmap->n, B->rmap->n, &PETSC_CUSPARSE_ONE, barray, blda, &PETSC_CUSPARSE_ZERO, barray, blda, mmdata->Bt, B->cmap->n); 24699371c9d4SSatish Balay PetscCallCUBLAS(cerr); 2470ccdfe979SStefano Zampini blda = B->cmap->n; 2471afb2bd1cSJunchao Zhang k = B->cmap->n; 2472afb2bd1cSJunchao Zhang } else { 2473afb2bd1cSJunchao Zhang k = B->rmap->n; 2474ccdfe979SStefano Zampini } 2475ccdfe979SStefano Zampini 2476afb2bd1cSJunchao Zhang /* perform the MatMat operation, op(A) is m x k, op(B) is k x n */ 24779371c9d4SSatish Balay stat = cusparse_csr_spmm(cusp->handle, opA, m, n, k, csrmat->num_entries, mat->alpha_one, mat->descr, csrmat->values->data().get(), csrmat->row_offsets->data().get(), csrmat->column_indices->data().get(), mmdata->Bt ? mmdata->Bt : barray, blda, mat->beta_zero, carray, clda); 24789371c9d4SSatish Balay PetscCallCUSPARSE(stat); 2479afb2bd1cSJunchao Zhang #endif 24809566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 24819566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(n * 2.0 * csrmat->num_entries)); 2482cd3f9d89SJunchao Zhang PetscCall(MatDenseRestoreArrayReadAndMemType(B, &barray)); 2483ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt) { 2484cd3f9d89SJunchao Zhang PetscCall(MatDenseRestoreArrayWriteAndMemType(mmdata->X, &carray)); 24854742e46bSJacob Faibussowitsch PetscCall(MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Internal(B, mmdata->X, C, PETSC_FALSE, PETSC_FALSE)); 2486ccdfe979SStefano Zampini } else if (product->type == MATPRODUCT_PtAP) { 2487cd3f9d89SJunchao Zhang PetscCall(MatDenseRestoreArrayWriteAndMemType(mmdata->X, &carray)); 24884742e46bSJacob Faibussowitsch PetscCall(MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Internal(B, mmdata->X, C, PETSC_TRUE, PETSC_FALSE)); 2489ccdfe979SStefano Zampini } else { 2490cd3f9d89SJunchao Zhang PetscCall(MatDenseRestoreArrayWriteAndMemType(C, &carray)); 2491ccdfe979SStefano Zampini } 249248a46eb9SPierre Jolivet if (mmdata->cisdense) PetscCall(MatConvert(C, MATSEQDENSE, MAT_INPLACE_MATRIX, &C)); 249348a46eb9SPierre Jolivet if (!biscuda) PetscCall(MatConvert(B, MATSEQDENSE, MAT_INPLACE_MATRIX, &B)); 24943ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2495ccdfe979SStefano Zampini } 2496ccdfe979SStefano Zampini 2497d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSymbolic_SeqAIJCUSPARSE_SeqDENSECUDA(Mat C) 2498d71ae5a4SJacob Faibussowitsch { 2499ccdfe979SStefano Zampini Mat_Product *product = C->product; 2500ccdfe979SStefano Zampini Mat A, B; 2501ccdfe979SStefano Zampini PetscInt m, n; 2502ccdfe979SStefano Zampini PetscBool cisdense, flg; 2503ccdfe979SStefano Zampini MatMatCusparse *mmdata; 2504ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSE *cusp; 2505ccdfe979SStefano Zampini 2506ccdfe979SStefano Zampini PetscFunctionBegin; 2507ccdfe979SStefano Zampini MatCheckProduct(C, 1); 250828b400f6SJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Product data not empty"); 2509ccdfe979SStefano Zampini A = product->A; 2510ccdfe979SStefano Zampini B = product->B; 25119566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQAIJCUSPARSE, &flg)); 251228b400f6SJacob Faibussowitsch PetscCheck(flg, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Not for type %s", ((PetscObject)A)->type_name); 2513ccdfe979SStefano Zampini cusp = (Mat_SeqAIJCUSPARSE *)A->spptr; 251408401ef6SPierre Jolivet PetscCheck(cusp->format == MAT_CUSPARSE_CSR, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Only for MAT_CUSPARSE_CSR format"); 2515ccdfe979SStefano Zampini switch (product->type) { 2516ccdfe979SStefano Zampini case MATPRODUCT_AB: 2517ccdfe979SStefano Zampini m = A->rmap->n; 2518ccdfe979SStefano Zampini n = B->cmap->n; 2519ccdfe979SStefano Zampini break; 2520ccdfe979SStefano Zampini case MATPRODUCT_AtB: 2521ccdfe979SStefano Zampini m = A->cmap->n; 2522ccdfe979SStefano Zampini n = B->cmap->n; 2523ccdfe979SStefano Zampini break; 2524ccdfe979SStefano Zampini case MATPRODUCT_ABt: 2525ccdfe979SStefano Zampini m = A->rmap->n; 2526ccdfe979SStefano Zampini n = B->rmap->n; 2527ccdfe979SStefano Zampini break; 2528ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 2529ccdfe979SStefano Zampini m = B->cmap->n; 2530ccdfe979SStefano Zampini n = B->cmap->n; 2531ccdfe979SStefano Zampini break; 2532ccdfe979SStefano Zampini case MATPRODUCT_RARt: 2533ccdfe979SStefano Zampini m = B->rmap->n; 2534ccdfe979SStefano Zampini n = B->rmap->n; 2535ccdfe979SStefano Zampini break; 2536d71ae5a4SJacob Faibussowitsch default: 2537d71ae5a4SJacob Faibussowitsch SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Unsupported product type %s", MatProductTypes[product->type]); 2538ccdfe979SStefano Zampini } 25399566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, m, n, m, n)); 2540ccdfe979SStefano Zampini /* if C is of type MATSEQDENSE (CPU), perform the operation on the GPU and then copy on the CPU */ 25419566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)C, MATSEQDENSE, &cisdense)); 25429566063dSJacob Faibussowitsch PetscCall(MatSetType(C, MATSEQDENSECUDA)); 2543ccdfe979SStefano Zampini 2544ccdfe979SStefano Zampini /* product data */ 25459566063dSJacob Faibussowitsch PetscCall(PetscNew(&mmdata)); 2546ccdfe979SStefano Zampini mmdata->cisdense = cisdense; 2547afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_LT(11, 0, 0) 2548afb2bd1cSJunchao Zhang /* cusparseXcsrmm does not support transpose on B, so we allocate buffer to store B^T */ 254948a46eb9SPierre Jolivet if (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) PetscCallCUDA(cudaMalloc((void **)&mmdata->Bt, (size_t)B->rmap->n * (size_t)B->cmap->n * sizeof(PetscScalar))); 2550afb2bd1cSJunchao Zhang #endif 2551ccdfe979SStefano Zampini /* for these products we need intermediate storage */ 2552ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt || product->type == MATPRODUCT_PtAP) { 25539566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)C), &mmdata->X)); 25549566063dSJacob Faibussowitsch PetscCall(MatSetType(mmdata->X, MATSEQDENSECUDA)); 2555ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt) { /* do not preallocate, since the first call to MatDenseCUDAGetArray will preallocate on the GPU for us */ 25569566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mmdata->X, A->rmap->n, B->rmap->n, A->rmap->n, B->rmap->n)); 2557ccdfe979SStefano Zampini } else { 25589566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mmdata->X, A->rmap->n, B->cmap->n, A->rmap->n, B->cmap->n)); 2559ccdfe979SStefano Zampini } 2560ccdfe979SStefano Zampini } 2561ccdfe979SStefano Zampini C->product->data = mmdata; 2562ccdfe979SStefano Zampini C->product->destroy = MatDestroy_MatMatCusparse; 2563ccdfe979SStefano Zampini 2564ccdfe979SStefano Zampini C->ops->productnumeric = MatProductNumeric_SeqAIJCUSPARSE_SeqDENSECUDA; 25653ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2566ccdfe979SStefano Zampini } 2567ccdfe979SStefano Zampini 2568d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductNumeric_SeqAIJCUSPARSE_SeqAIJCUSPARSE(Mat C) 2569d71ae5a4SJacob Faibussowitsch { 2570ccdfe979SStefano Zampini Mat_Product *product = C->product; 2571fcdce8c4SStefano Zampini Mat A, B; 2572fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp, *Bcusp, *Ccusp; 2573fcdce8c4SStefano Zampini Mat_SeqAIJ *c = (Mat_SeqAIJ *)C->data; 2574fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Amat, *Bmat, *Cmat; 2575fcdce8c4SStefano Zampini CsrMatrix *Acsr, *Bcsr, *Ccsr; 2576fcdce8c4SStefano Zampini PetscBool flg; 2577fcdce8c4SStefano Zampini cusparseStatus_t stat; 2578fcdce8c4SStefano Zampini MatProductType ptype; 2579fcdce8c4SStefano Zampini MatMatCusparse *mmdata; 2580fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 2581fcdce8c4SStefano Zampini cusparseSpMatDescr_t BmatSpDescr; 2582fcdce8c4SStefano Zampini #endif 2583b4285af6SJunchao Zhang cusparseOperation_t opA = CUSPARSE_OPERATION_NON_TRANSPOSE, opB = CUSPARSE_OPERATION_NON_TRANSPOSE; /* cuSPARSE spgemm doesn't support transpose yet */ 2584ccdfe979SStefano Zampini 2585ccdfe979SStefano Zampini PetscFunctionBegin; 2586ccdfe979SStefano Zampini MatCheckProduct(C, 1); 258728b400f6SJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Product data empty"); 25889566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)C, MATSEQAIJCUSPARSE, &flg)); 258928b400f6SJacob Faibussowitsch PetscCheck(flg, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Not for C of type %s", ((PetscObject)C)->type_name); 2590fcdce8c4SStefano Zampini mmdata = (MatMatCusparse *)C->product->data; 2591fcdce8c4SStefano Zampini A = product->A; 2592fcdce8c4SStefano Zampini B = product->B; 2593fcdce8c4SStefano Zampini if (mmdata->reusesym) { /* this happens when api_user is true, meaning that the matrix values have been already computed in the MatProductSymbolic phase */ 2594fcdce8c4SStefano Zampini mmdata->reusesym = PETSC_FALSE; 2595fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE *)C->spptr; 259608401ef6SPierre Jolivet PetscCheck(Ccusp->format == MAT_CUSPARSE_CSR, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Only for MAT_CUSPARSE_CSR format"); 2597fcdce8c4SStefano Zampini Cmat = Ccusp->mat; 259828b400f6SJacob Faibussowitsch PetscCheck(Cmat, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Missing C mult struct for product type %s", MatProductTypes[C->product->type]); 2599fcdce8c4SStefano Zampini Ccsr = (CsrMatrix *)Cmat->mat; 260028b400f6SJacob Faibussowitsch PetscCheck(Ccsr, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Missing C CSR struct"); 2601fcdce8c4SStefano Zampini goto finalize; 2602fcdce8c4SStefano Zampini } 2603fcdce8c4SStefano Zampini if (!c->nz) goto finalize; 26049566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQAIJCUSPARSE, &flg)); 260528b400f6SJacob Faibussowitsch PetscCheck(flg, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Not for type %s", ((PetscObject)A)->type_name); 26069566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)B, MATSEQAIJCUSPARSE, &flg)); 260728b400f6SJacob Faibussowitsch PetscCheck(flg, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Not for B of type %s", ((PetscObject)B)->type_name); 260828b400f6SJacob Faibussowitsch PetscCheck(!A->boundtocpu, PetscObjectComm((PetscObject)C), PETSC_ERR_ARG_WRONG, "Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 260928b400f6SJacob Faibussowitsch PetscCheck(!B->boundtocpu, PetscObjectComm((PetscObject)C), PETSC_ERR_ARG_WRONG, "Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 2610fcdce8c4SStefano Zampini Acusp = (Mat_SeqAIJCUSPARSE *)A->spptr; 2611fcdce8c4SStefano Zampini Bcusp = (Mat_SeqAIJCUSPARSE *)B->spptr; 2612fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE *)C->spptr; 261308401ef6SPierre Jolivet PetscCheck(Acusp->format == MAT_CUSPARSE_CSR, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Only for MAT_CUSPARSE_CSR format"); 261408401ef6SPierre Jolivet PetscCheck(Bcusp->format == MAT_CUSPARSE_CSR, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Only for MAT_CUSPARSE_CSR format"); 261508401ef6SPierre Jolivet PetscCheck(Ccusp->format == MAT_CUSPARSE_CSR, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Only for MAT_CUSPARSE_CSR format"); 26169566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 26179566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(B)); 2618fcdce8c4SStefano Zampini 2619fcdce8c4SStefano Zampini ptype = product->type; 2620b94d7dedSBarry Smith if (A->symmetric == PETSC_BOOL3_TRUE && ptype == MATPRODUCT_AtB) { 2621fa046f9fSJunchao Zhang ptype = MATPRODUCT_AB; 262228b400f6SJacob Faibussowitsch PetscCheck(product->symbolic_used_the_fact_A_is_symmetric, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Symbolic should have been built using the fact that A is symmetric"); 2623fa046f9fSJunchao Zhang } 2624b94d7dedSBarry Smith if (B->symmetric == PETSC_BOOL3_TRUE && ptype == MATPRODUCT_ABt) { 2625fa046f9fSJunchao Zhang ptype = MATPRODUCT_AB; 262628b400f6SJacob Faibussowitsch PetscCheck(product->symbolic_used_the_fact_B_is_symmetric, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Symbolic should have been built using the fact that B is symmetric"); 2627fa046f9fSJunchao Zhang } 2628fcdce8c4SStefano Zampini switch (ptype) { 2629fcdce8c4SStefano Zampini case MATPRODUCT_AB: 2630fcdce8c4SStefano Zampini Amat = Acusp->mat; 2631fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2632fcdce8c4SStefano Zampini break; 2633fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 2634fcdce8c4SStefano Zampini Amat = Acusp->matTranspose; 2635fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2636fcdce8c4SStefano Zampini break; 2637fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 2638fcdce8c4SStefano Zampini Amat = Acusp->mat; 2639fcdce8c4SStefano Zampini Bmat = Bcusp->matTranspose; 2640fcdce8c4SStefano Zampini break; 2641d71ae5a4SJacob Faibussowitsch default: 2642d71ae5a4SJacob Faibussowitsch SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Unsupported product type %s", MatProductTypes[product->type]); 2643fcdce8c4SStefano Zampini } 2644fcdce8c4SStefano Zampini Cmat = Ccusp->mat; 264528b400f6SJacob Faibussowitsch PetscCheck(Amat, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Missing A mult struct for product type %s", MatProductTypes[ptype]); 264628b400f6SJacob Faibussowitsch PetscCheck(Bmat, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Missing B mult struct for product type %s", MatProductTypes[ptype]); 264728b400f6SJacob Faibussowitsch PetscCheck(Cmat, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Missing C mult struct for product type %s", MatProductTypes[ptype]); 2648fcdce8c4SStefano Zampini Acsr = (CsrMatrix *)Amat->mat; 2649fcdce8c4SStefano Zampini Bcsr = mmdata->Bcsr ? mmdata->Bcsr : (CsrMatrix *)Bmat->mat; /* B may be in compressed row storage */ 2650fcdce8c4SStefano Zampini Ccsr = (CsrMatrix *)Cmat->mat; 265128b400f6SJacob Faibussowitsch PetscCheck(Acsr, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Missing A CSR struct"); 265228b400f6SJacob Faibussowitsch PetscCheck(Bcsr, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Missing B CSR struct"); 265328b400f6SJacob Faibussowitsch PetscCheck(Ccsr, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Missing C CSR struct"); 26549566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 2655fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 2656fcdce8c4SStefano Zampini BmatSpDescr = mmdata->Bcsr ? mmdata->matSpBDescr : Bmat->matDescr; /* B may be in compressed row storage */ 26579566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_DEVICE)); 2658b4285af6SJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 4, 0) 26599371c9d4SSatish Balay stat = cusparseSpGEMMreuse_compute(Ccusp->handle, opA, opB, Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc); 26609371c9d4SSatish Balay PetscCallCUSPARSE(stat); 2661b4285af6SJunchao Zhang #else 26629371c9d4SSatish Balay stat = cusparseSpGEMM_compute(Ccusp->handle, opA, opB, Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, &mmdata->mmBufferSize, mmdata->mmBuffer); 26639371c9d4SSatish Balay PetscCallCUSPARSE(stat); 26649371c9d4SSatish Balay stat = cusparseSpGEMM_copy(Ccusp->handle, opA, opB, Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc); 26659371c9d4SSatish Balay PetscCallCUSPARSE(stat); 2666b4285af6SJunchao Zhang #endif 2667fcdce8c4SStefano Zampini #else 26689371c9d4SSatish Balay stat = cusparse_csr_spgemm(Ccusp->handle, opA, opB, Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, Amat->descr, Acsr->num_entries, Acsr->values->data().get(), Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), Bmat->descr, Bcsr->num_entries, 26699371c9d4SSatish Balay Bcsr->values->data().get(), Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), Cmat->descr, Ccsr->values->data().get(), Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get()); 26709371c9d4SSatish Balay PetscCallCUSPARSE(stat); 2671fcdce8c4SStefano Zampini #endif 26729566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(mmdata->flops)); 26739566063dSJacob Faibussowitsch PetscCallCUDA(WaitForCUDA()); 26749566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 2675fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_GPU; 2676fcdce8c4SStefano Zampini finalize: 2677fcdce8c4SStefano Zampini /* shorter version of MatAssemblyEnd_SeqAIJ */ 26789566063dSJacob Faibussowitsch PetscCall(PetscInfo(C, "Matrix size: %" PetscInt_FMT " X %" PetscInt_FMT "; storage space: 0 unneeded,%" PetscInt_FMT " used\n", C->rmap->n, C->cmap->n, c->nz)); 26799566063dSJacob Faibussowitsch PetscCall(PetscInfo(C, "Number of mallocs during MatSetValues() is 0\n")); 26809566063dSJacob Faibussowitsch PetscCall(PetscInfo(C, "Maximum nonzeros in any row is %" PetscInt_FMT "\n", c->rmax)); 2681fcdce8c4SStefano Zampini c->reallocs = 0; 2682fcdce8c4SStefano Zampini C->info.mallocs += 0; 2683fcdce8c4SStefano Zampini C->info.nz_unneeded = 0; 2684fcdce8c4SStefano Zampini C->assembled = C->was_assembled = PETSC_TRUE; 2685fcdce8c4SStefano Zampini C->num_ass++; 26863ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2687ccdfe979SStefano Zampini } 2688fcdce8c4SStefano Zampini 2689d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSymbolic_SeqAIJCUSPARSE_SeqAIJCUSPARSE(Mat C) 2690d71ae5a4SJacob Faibussowitsch { 2691fcdce8c4SStefano Zampini Mat_Product *product = C->product; 2692fcdce8c4SStefano Zampini Mat A, B; 2693fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp, *Bcusp, *Ccusp; 2694fcdce8c4SStefano Zampini Mat_SeqAIJ *a, *b, *c; 2695fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Amat, *Bmat, *Cmat; 2696fcdce8c4SStefano Zampini CsrMatrix *Acsr, *Bcsr, *Ccsr; 2697fcdce8c4SStefano Zampini PetscInt i, j, m, n, k; 2698fcdce8c4SStefano Zampini PetscBool flg; 2699fcdce8c4SStefano Zampini cusparseStatus_t stat; 2700fcdce8c4SStefano Zampini MatProductType ptype; 2701fcdce8c4SStefano Zampini MatMatCusparse *mmdata; 2702fcdce8c4SStefano Zampini PetscLogDouble flops; 2703fcdce8c4SStefano Zampini PetscBool biscompressed, ciscompressed; 2704fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 2705fcdce8c4SStefano Zampini int64_t C_num_rows1, C_num_cols1, C_nnz1; 2706fcdce8c4SStefano Zampini cusparseSpMatDescr_t BmatSpDescr; 2707fcdce8c4SStefano Zampini #else 2708fcdce8c4SStefano Zampini int cnz; 2709fcdce8c4SStefano Zampini #endif 2710b4285af6SJunchao Zhang cusparseOperation_t opA = CUSPARSE_OPERATION_NON_TRANSPOSE, opB = CUSPARSE_OPERATION_NON_TRANSPOSE; /* cuSPARSE spgemm doesn't support transpose yet */ 2711fcdce8c4SStefano Zampini 2712fcdce8c4SStefano Zampini PetscFunctionBegin; 2713fcdce8c4SStefano Zampini MatCheckProduct(C, 1); 271428b400f6SJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Product data not empty"); 2715fcdce8c4SStefano Zampini A = product->A; 2716fcdce8c4SStefano Zampini B = product->B; 27179566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQAIJCUSPARSE, &flg)); 271828b400f6SJacob Faibussowitsch PetscCheck(flg, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Not for type %s", ((PetscObject)A)->type_name); 27199566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)B, MATSEQAIJCUSPARSE, &flg)); 272028b400f6SJacob Faibussowitsch PetscCheck(flg, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Not for B of type %s", ((PetscObject)B)->type_name); 2721fcdce8c4SStefano Zampini a = (Mat_SeqAIJ *)A->data; 2722fcdce8c4SStefano Zampini b = (Mat_SeqAIJ *)B->data; 2723fcdce8c4SStefano Zampini /* product data */ 27249566063dSJacob Faibussowitsch PetscCall(PetscNew(&mmdata)); 2725fcdce8c4SStefano Zampini C->product->data = mmdata; 2726fcdce8c4SStefano Zampini C->product->destroy = MatDestroy_MatMatCusparse; 2727fcdce8c4SStefano Zampini 27289566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 27299566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(B)); 2730d60bce21SJunchao Zhang Acusp = (Mat_SeqAIJCUSPARSE *)A->spptr; /* Access spptr after MatSeqAIJCUSPARSECopyToGPU, not before */ 2731d60bce21SJunchao Zhang Bcusp = (Mat_SeqAIJCUSPARSE *)B->spptr; 273208401ef6SPierre Jolivet PetscCheck(Acusp->format == MAT_CUSPARSE_CSR, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Only for MAT_CUSPARSE_CSR format"); 273308401ef6SPierre Jolivet PetscCheck(Bcusp->format == MAT_CUSPARSE_CSR, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Only for MAT_CUSPARSE_CSR format"); 2734d60bce21SJunchao Zhang 2735fcdce8c4SStefano Zampini ptype = product->type; 2736b94d7dedSBarry Smith if (A->symmetric == PETSC_BOOL3_TRUE && ptype == MATPRODUCT_AtB) { 2737fa046f9fSJunchao Zhang ptype = MATPRODUCT_AB; 2738fa046f9fSJunchao Zhang product->symbolic_used_the_fact_A_is_symmetric = PETSC_TRUE; 2739fa046f9fSJunchao Zhang } 2740b94d7dedSBarry Smith if (B->symmetric == PETSC_BOOL3_TRUE && ptype == MATPRODUCT_ABt) { 2741fa046f9fSJunchao Zhang ptype = MATPRODUCT_AB; 2742fa046f9fSJunchao Zhang product->symbolic_used_the_fact_B_is_symmetric = PETSC_TRUE; 2743fa046f9fSJunchao Zhang } 2744fcdce8c4SStefano Zampini biscompressed = PETSC_FALSE; 2745fcdce8c4SStefano Zampini ciscompressed = PETSC_FALSE; 2746fcdce8c4SStefano Zampini switch (ptype) { 2747fcdce8c4SStefano Zampini case MATPRODUCT_AB: 2748fcdce8c4SStefano Zampini m = A->rmap->n; 2749fcdce8c4SStefano Zampini n = B->cmap->n; 2750fcdce8c4SStefano Zampini k = A->cmap->n; 2751fcdce8c4SStefano Zampini Amat = Acusp->mat; 2752fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2753fcdce8c4SStefano Zampini if (a->compressedrow.use) ciscompressed = PETSC_TRUE; 2754fcdce8c4SStefano Zampini if (b->compressedrow.use) biscompressed = PETSC_TRUE; 2755fcdce8c4SStefano Zampini break; 2756fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 2757fcdce8c4SStefano Zampini m = A->cmap->n; 2758fcdce8c4SStefano Zampini n = B->cmap->n; 2759fcdce8c4SStefano Zampini k = A->rmap->n; 27609566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEFormExplicitTranspose(A)); 2761fcdce8c4SStefano Zampini Amat = Acusp->matTranspose; 2762fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2763fcdce8c4SStefano Zampini if (b->compressedrow.use) biscompressed = PETSC_TRUE; 2764fcdce8c4SStefano Zampini break; 2765fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 2766fcdce8c4SStefano Zampini m = A->rmap->n; 2767fcdce8c4SStefano Zampini n = B->rmap->n; 2768fcdce8c4SStefano Zampini k = A->cmap->n; 27699566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEFormExplicitTranspose(B)); 2770fcdce8c4SStefano Zampini Amat = Acusp->mat; 2771fcdce8c4SStefano Zampini Bmat = Bcusp->matTranspose; 2772fcdce8c4SStefano Zampini if (a->compressedrow.use) ciscompressed = PETSC_TRUE; 2773fcdce8c4SStefano Zampini break; 2774d71ae5a4SJacob Faibussowitsch default: 2775d71ae5a4SJacob Faibussowitsch SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Unsupported product type %s", MatProductTypes[product->type]); 2776fcdce8c4SStefano Zampini } 2777fcdce8c4SStefano Zampini 2778fcdce8c4SStefano Zampini /* create cusparse matrix */ 27799566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, m, n, m, n)); 27809566063dSJacob Faibussowitsch PetscCall(MatSetType(C, MATSEQAIJCUSPARSE)); 2781fcdce8c4SStefano Zampini c = (Mat_SeqAIJ *)C->data; 2782fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE *)C->spptr; 2783fcdce8c4SStefano Zampini Cmat = new Mat_SeqAIJCUSPARSEMultStruct; 2784fcdce8c4SStefano Zampini Ccsr = new CsrMatrix; 2785fcdce8c4SStefano Zampini 2786fcdce8c4SStefano Zampini c->compressedrow.use = ciscompressed; 2787fcdce8c4SStefano Zampini if (c->compressedrow.use) { /* if a is in compressed row, than c will be in compressed row format */ 2788fcdce8c4SStefano Zampini c->compressedrow.nrows = a->compressedrow.nrows; 27899566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(c->compressedrow.nrows + 1, &c->compressedrow.i, c->compressedrow.nrows, &c->compressedrow.rindex)); 27909566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(c->compressedrow.rindex, a->compressedrow.rindex, c->compressedrow.nrows)); 2791fcdce8c4SStefano Zampini Ccusp->workVector = new THRUSTARRAY(c->compressedrow.nrows); 2792fcdce8c4SStefano Zampini Cmat->cprowIndices = new THRUSTINTARRAY(c->compressedrow.nrows); 2793fcdce8c4SStefano Zampini Cmat->cprowIndices->assign(c->compressedrow.rindex, c->compressedrow.rindex + c->compressedrow.nrows); 2794fcdce8c4SStefano Zampini } else { 2795fcdce8c4SStefano Zampini c->compressedrow.nrows = 0; 2796fcdce8c4SStefano Zampini c->compressedrow.i = NULL; 2797fcdce8c4SStefano Zampini c->compressedrow.rindex = NULL; 2798fcdce8c4SStefano Zampini Ccusp->workVector = NULL; 2799fcdce8c4SStefano Zampini Cmat->cprowIndices = NULL; 2800fcdce8c4SStefano Zampini } 2801fcdce8c4SStefano Zampini Ccusp->nrows = ciscompressed ? c->compressedrow.nrows : m; 2802fcdce8c4SStefano Zampini Ccusp->mat = Cmat; 2803fcdce8c4SStefano Zampini Ccusp->mat->mat = Ccsr; 2804fcdce8c4SStefano Zampini Ccsr->num_rows = Ccusp->nrows; 2805fcdce8c4SStefano Zampini Ccsr->num_cols = n; 2806fcdce8c4SStefano Zampini Ccsr->row_offsets = new THRUSTINTARRAY32(Ccusp->nrows + 1); 28079566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&Cmat->descr)); 28089566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(Cmat->descr, CUSPARSE_INDEX_BASE_ZERO)); 28099566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(Cmat->descr, CUSPARSE_MATRIX_TYPE_GENERAL)); 28109566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(Cmat->alpha_one), sizeof(PetscScalar))); 28119566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(Cmat->beta_zero), sizeof(PetscScalar))); 28129566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(Cmat->beta_one), sizeof(PetscScalar))); 28139566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(Cmat->alpha_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar), cudaMemcpyHostToDevice)); 28149566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(Cmat->beta_zero, &PETSC_CUSPARSE_ZERO, sizeof(PetscScalar), cudaMemcpyHostToDevice)); 28159566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(Cmat->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar), cudaMemcpyHostToDevice)); 2816fcdce8c4SStefano Zampini if (!Ccsr->num_rows || !Ccsr->num_cols || !a->nz || !b->nz) { /* cusparse raise errors in different calls when matrices have zero rows/columns! */ 2817fcdce8c4SStefano Zampini thrust::fill(thrust::device, Ccsr->row_offsets->begin(), Ccsr->row_offsets->end(), 0); 2818fcdce8c4SStefano Zampini c->nz = 0; 2819fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 2820fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 2821fcdce8c4SStefano Zampini goto finalizesym; 2822fcdce8c4SStefano Zampini } 2823fcdce8c4SStefano Zampini 282428b400f6SJacob Faibussowitsch PetscCheck(Amat, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Missing A mult struct for product type %s", MatProductTypes[ptype]); 282528b400f6SJacob Faibussowitsch PetscCheck(Bmat, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Missing B mult struct for product type %s", MatProductTypes[ptype]); 2826fcdce8c4SStefano Zampini Acsr = (CsrMatrix *)Amat->mat; 2827fcdce8c4SStefano Zampini if (!biscompressed) { 2828fcdce8c4SStefano Zampini Bcsr = (CsrMatrix *)Bmat->mat; 2829fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 2830fcdce8c4SStefano Zampini BmatSpDescr = Bmat->matDescr; 2831fcdce8c4SStefano Zampini #endif 2832fcdce8c4SStefano Zampini } else { /* we need to use row offsets for the full matrix */ 2833fcdce8c4SStefano Zampini CsrMatrix *cBcsr = (CsrMatrix *)Bmat->mat; 2834fcdce8c4SStefano Zampini Bcsr = new CsrMatrix; 2835fcdce8c4SStefano Zampini Bcsr->num_rows = B->rmap->n; 2836fcdce8c4SStefano Zampini Bcsr->num_cols = cBcsr->num_cols; 2837fcdce8c4SStefano Zampini Bcsr->num_entries = cBcsr->num_entries; 2838fcdce8c4SStefano Zampini Bcsr->column_indices = cBcsr->column_indices; 2839fcdce8c4SStefano Zampini Bcsr->values = cBcsr->values; 2840fcdce8c4SStefano Zampini if (!Bcusp->rowoffsets_gpu) { 2841fcdce8c4SStefano Zampini Bcusp->rowoffsets_gpu = new THRUSTINTARRAY32(B->rmap->n + 1); 2842fcdce8c4SStefano Zampini Bcusp->rowoffsets_gpu->assign(b->i, b->i + B->rmap->n + 1); 28439566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu((B->rmap->n + 1) * sizeof(PetscInt))); 2844fcdce8c4SStefano Zampini } 2845fcdce8c4SStefano Zampini Bcsr->row_offsets = Bcusp->rowoffsets_gpu; 2846fcdce8c4SStefano Zampini mmdata->Bcsr = Bcsr; 2847fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 2848fcdce8c4SStefano Zampini if (Bcsr->num_rows && Bcsr->num_cols) { 28499371c9d4SSatish Balay stat = cusparseCreateCsr(&mmdata->matSpBDescr, Bcsr->num_rows, Bcsr->num_cols, Bcsr->num_entries, Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), Bcsr->values->data().get(), CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype); 28509371c9d4SSatish Balay PetscCallCUSPARSE(stat); 2851fcdce8c4SStefano Zampini } 2852fcdce8c4SStefano Zampini BmatSpDescr = mmdata->matSpBDescr; 2853fcdce8c4SStefano Zampini #endif 2854fcdce8c4SStefano Zampini } 285528b400f6SJacob Faibussowitsch PetscCheck(Acsr, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Missing A CSR struct"); 285628b400f6SJacob Faibussowitsch PetscCheck(Bcsr, PetscObjectComm((PetscObject)C), PETSC_ERR_GPU, "Missing B CSR struct"); 2857fcdce8c4SStefano Zampini /* precompute flops count */ 2858fcdce8c4SStefano Zampini if (ptype == MATPRODUCT_AB) { 2859fcdce8c4SStefano Zampini for (i = 0, flops = 0; i < A->rmap->n; i++) { 2860fcdce8c4SStefano Zampini const PetscInt st = a->i[i]; 2861fcdce8c4SStefano Zampini const PetscInt en = a->i[i + 1]; 2862fcdce8c4SStefano Zampini for (j = st; j < en; j++) { 2863fcdce8c4SStefano Zampini const PetscInt brow = a->j[j]; 2864fcdce8c4SStefano Zampini flops += 2. * (b->i[brow + 1] - b->i[brow]); 2865fcdce8c4SStefano Zampini } 2866fcdce8c4SStefano Zampini } 2867fcdce8c4SStefano Zampini } else if (ptype == MATPRODUCT_AtB) { 2868fcdce8c4SStefano Zampini for (i = 0, flops = 0; i < A->rmap->n; i++) { 2869fcdce8c4SStefano Zampini const PetscInt anzi = a->i[i + 1] - a->i[i]; 2870fcdce8c4SStefano Zampini const PetscInt bnzi = b->i[i + 1] - b->i[i]; 2871fcdce8c4SStefano Zampini flops += (2. * anzi) * bnzi; 2872fcdce8c4SStefano Zampini } 2873fcdce8c4SStefano Zampini } else { /* TODO */ 2874fcdce8c4SStefano Zampini flops = 0.; 2875fcdce8c4SStefano Zampini } 2876fcdce8c4SStefano Zampini 2877fcdce8c4SStefano Zampini mmdata->flops = flops; 28789566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 2879b4285af6SJunchao Zhang 2880fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 28819566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_DEVICE)); 28829371c9d4SSatish Balay stat = cusparseCreateCsr(&Cmat->matDescr, Ccsr->num_rows, Ccsr->num_cols, 0, NULL, NULL, NULL, CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype); 28839371c9d4SSatish Balay PetscCallCUSPARSE(stat); 28849566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSpGEMM_createDescr(&mmdata->spgemmDesc)); 2885b4285af6SJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 4, 0) 2886b4285af6SJunchao Zhang { 2887b4285af6SJunchao Zhang /* cusparseSpGEMMreuse has more reasonable APIs than cusparseSpGEMM, so we prefer to use it. 2888b4285af6SJunchao Zhang We follow the sample code at https://github.com/NVIDIA/CUDALibrarySamples/blob/master/cuSPARSE/spgemm_reuse 2889b4285af6SJunchao Zhang */ 2890b4285af6SJunchao Zhang void *dBuffer1 = NULL; 2891b4285af6SJunchao Zhang void *dBuffer2 = NULL; 2892b4285af6SJunchao Zhang void *dBuffer3 = NULL; 2893b4285af6SJunchao Zhang /* dBuffer4, dBuffer5 are needed by cusparseSpGEMMreuse_compute, and therefore are stored in mmdata */ 2894b4285af6SJunchao Zhang size_t bufferSize1 = 0; 2895b4285af6SJunchao Zhang size_t bufferSize2 = 0; 2896b4285af6SJunchao Zhang size_t bufferSize3 = 0; 2897b4285af6SJunchao Zhang size_t bufferSize4 = 0; 2898b4285af6SJunchao Zhang size_t bufferSize5 = 0; 2899b4285af6SJunchao Zhang 2900b4285af6SJunchao Zhang /* ask bufferSize1 bytes for external memory */ 29019371c9d4SSatish Balay stat = cusparseSpGEMMreuse_workEstimation(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, &bufferSize1, NULL); 29029371c9d4SSatish Balay PetscCallCUSPARSE(stat); 29039566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&dBuffer1, bufferSize1)); 2904b4285af6SJunchao Zhang /* inspect the matrices A and B to understand the memory requirement for the next step */ 29059371c9d4SSatish Balay stat = cusparseSpGEMMreuse_workEstimation(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, &bufferSize1, dBuffer1); 29069371c9d4SSatish Balay PetscCallCUSPARSE(stat); 2907b4285af6SJunchao Zhang 29089371c9d4SSatish Balay stat = cusparseSpGEMMreuse_nnz(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, &bufferSize2, NULL, &bufferSize3, NULL, &bufferSize4, NULL); 29099371c9d4SSatish Balay PetscCallCUSPARSE(stat); 29109566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&dBuffer2, bufferSize2)); 29119566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&dBuffer3, bufferSize3)); 29129566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&mmdata->dBuffer4, bufferSize4)); 29139371c9d4SSatish Balay stat = cusparseSpGEMMreuse_nnz(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, &bufferSize2, dBuffer2, &bufferSize3, dBuffer3, &bufferSize4, mmdata->dBuffer4); 29149371c9d4SSatish Balay PetscCallCUSPARSE(stat); 29159566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(dBuffer1)); 29169566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(dBuffer2)); 2917b4285af6SJunchao Zhang 2918b4285af6SJunchao Zhang /* get matrix C non-zero entries C_nnz1 */ 29199566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSpMatGetSize(Cmat->matDescr, &C_num_rows1, &C_num_cols1, &C_nnz1)); 2920b4285af6SJunchao Zhang c->nz = (PetscInt)C_nnz1; 2921b4285af6SJunchao Zhang /* allocate matrix C */ 29229371c9d4SSatish Balay Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 29239371c9d4SSatish Balay PetscCallCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 29249371c9d4SSatish Balay Ccsr->values = new THRUSTARRAY(c->nz); 29259371c9d4SSatish Balay PetscCallCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2926b4285af6SJunchao Zhang /* update matC with the new pointers */ 29279371c9d4SSatish Balay stat = cusparseCsrSetPointers(Cmat->matDescr, Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get(), Ccsr->values->data().get()); 29289371c9d4SSatish Balay PetscCallCUSPARSE(stat); 2929b4285af6SJunchao Zhang 29309371c9d4SSatish Balay stat = cusparseSpGEMMreuse_copy(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, &bufferSize5, NULL); 29319371c9d4SSatish Balay PetscCallCUSPARSE(stat); 29329566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&mmdata->dBuffer5, bufferSize5)); 29339371c9d4SSatish Balay stat = cusparseSpGEMMreuse_copy(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, &bufferSize5, mmdata->dBuffer5); 29349371c9d4SSatish Balay PetscCallCUSPARSE(stat); 29359566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(dBuffer3)); 29369371c9d4SSatish Balay stat = cusparseSpGEMMreuse_compute(Ccusp->handle, opA, opB, Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc); 29379371c9d4SSatish Balay PetscCallCUSPARSE(stat); 29389566063dSJacob Faibussowitsch PetscCall(PetscInfo(C, "Buffer sizes for type %s, result %" PetscInt_FMT " x %" PetscInt_FMT " (k %" PetscInt_FMT ", nzA %" PetscInt_FMT ", nzB %" PetscInt_FMT ", nzC %" PetscInt_FMT ") are: %ldKB %ldKB\n", MatProductTypes[ptype], m, n, k, a->nz, b->nz, c->nz, bufferSize4 / 1024, bufferSize5 / 1024)); 2939b4285af6SJunchao Zhang } 2940ae37ee31SJunchao Zhang #else 2941b4285af6SJunchao Zhang size_t bufSize2; 2942fcdce8c4SStefano Zampini /* ask bufferSize bytes for external memory */ 29439371c9d4SSatish Balay stat = cusparseSpGEMM_workEstimation(Ccusp->handle, opA, opB, Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, &bufSize2, NULL); 29449371c9d4SSatish Balay PetscCallCUSPARSE(stat); 29459566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&mmdata->mmBuffer2, bufSize2)); 2946fcdce8c4SStefano Zampini /* inspect the matrices A and B to understand the memory requirement for the next step */ 29479371c9d4SSatish Balay stat = cusparseSpGEMM_workEstimation(Ccusp->handle, opA, opB, Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, &bufSize2, mmdata->mmBuffer2); 29489371c9d4SSatish Balay PetscCallCUSPARSE(stat); 2949fcdce8c4SStefano Zampini /* ask bufferSize again bytes for external memory */ 29509371c9d4SSatish Balay stat = cusparseSpGEMM_compute(Ccusp->handle, opA, opB, Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, &mmdata->mmBufferSize, NULL); 29519371c9d4SSatish Balay PetscCallCUSPARSE(stat); 2952fcdce8c4SStefano Zampini /* The CUSPARSE documentation is not clear, nor the API 2953fcdce8c4SStefano Zampini We need both buffers to perform the operations properly! 2954fcdce8c4SStefano Zampini mmdata->mmBuffer2 does not appear anywhere in the compute/copy API 2955fcdce8c4SStefano Zampini it only appears for the workEstimation stuff, but it seems it is needed in compute, so probably the address 2956fcdce8c4SStefano Zampini is stored in the descriptor! What a messy API... */ 29579566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&mmdata->mmBuffer, mmdata->mmBufferSize)); 2958fcdce8c4SStefano Zampini /* compute the intermediate product of A * B */ 29599371c9d4SSatish Balay stat = cusparseSpGEMM_compute(Ccusp->handle, opA, opB, Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, &mmdata->mmBufferSize, mmdata->mmBuffer); 29609371c9d4SSatish Balay PetscCallCUSPARSE(stat); 2961fcdce8c4SStefano Zampini /* get matrix C non-zero entries C_nnz1 */ 29629566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSpMatGetSize(Cmat->matDescr, &C_num_rows1, &C_num_cols1, &C_nnz1)); 2963fcdce8c4SStefano Zampini c->nz = (PetscInt)C_nnz1; 29649371c9d4SSatish Balay PetscCall(PetscInfo(C, "Buffer sizes for type %s, result %" PetscInt_FMT " x %" PetscInt_FMT " (k %" PetscInt_FMT ", nzA %" PetscInt_FMT ", nzB %" PetscInt_FMT ", nzC %" PetscInt_FMT ") are: %ldKB %ldKB\n", MatProductTypes[ptype], m, n, k, a->nz, b->nz, c->nz, bufSize2 / 1024, 29659371c9d4SSatish Balay mmdata->mmBufferSize / 1024)); 2966fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 29679566063dSJacob Faibussowitsch PetscCallCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2968fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 29699566063dSJacob Faibussowitsch PetscCallCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 29709371c9d4SSatish Balay stat = cusparseCsrSetPointers(Cmat->matDescr, Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get(), Ccsr->values->data().get()); 29719371c9d4SSatish Balay PetscCallCUSPARSE(stat); 29729371c9d4SSatish Balay stat = cusparseSpGEMM_copy(Ccusp->handle, opA, opB, Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc); 29739371c9d4SSatish Balay PetscCallCUSPARSE(stat); 2974ae37ee31SJunchao Zhang #endif // PETSC_PKG_CUDA_VERSION_GE(11,4,0) 2975fcdce8c4SStefano Zampini #else 29769566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_HOST)); 29779371c9d4SSatish Balay stat = cusparseXcsrgemmNnz(Ccusp->handle, opA, opB, Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, Amat->descr, Acsr->num_entries, Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), Bmat->descr, Bcsr->num_entries, 29789371c9d4SSatish Balay Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), Cmat->descr, Ccsr->row_offsets->data().get(), &cnz); 29799371c9d4SSatish Balay PetscCallCUSPARSE(stat); 2980fcdce8c4SStefano Zampini c->nz = cnz; 2981fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 29829566063dSJacob Faibussowitsch PetscCallCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2983fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 29849566063dSJacob Faibussowitsch PetscCallCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2985fcdce8c4SStefano Zampini 29869566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_DEVICE)); 2987fcdce8c4SStefano Zampini /* with the old gemm interface (removed from 11.0 on) we cannot compute the symbolic factorization only. 2988fcdce8c4SStefano Zampini I have tried using the gemm2 interface (alpha * A * B + beta * D), which allows to do symbolic by passing NULL for values, but it seems quite buggy when 2989fcdce8c4SStefano Zampini D is NULL, despite the fact that CUSPARSE documentation claims it is supported! */ 29909371c9d4SSatish Balay stat = cusparse_csr_spgemm(Ccusp->handle, opA, opB, Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, Amat->descr, Acsr->num_entries, Acsr->values->data().get(), Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), Bmat->descr, Bcsr->num_entries, 29919371c9d4SSatish Balay Bcsr->values->data().get(), Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), Cmat->descr, Ccsr->values->data().get(), Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get()); 29929371c9d4SSatish Balay PetscCallCUSPARSE(stat); 2993fcdce8c4SStefano Zampini #endif 29949566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(mmdata->flops)); 29959566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 2996fcdce8c4SStefano Zampini finalizesym: 2997fcdce8c4SStefano Zampini c->singlemalloc = PETSC_FALSE; 2998fcdce8c4SStefano Zampini c->free_a = PETSC_TRUE; 2999fcdce8c4SStefano Zampini c->free_ij = PETSC_TRUE; 30009566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m + 1, &c->i)); 30019566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(c->nz, &c->j)); 3002fcdce8c4SStefano Zampini if (PetscDefined(USE_64BIT_INDICES)) { /* 32 to 64 bit conversion on the GPU and then copy to host (lazy) */ 3003fcdce8c4SStefano Zampini PetscInt *d_i = c->i; 3004fcdce8c4SStefano Zampini THRUSTINTARRAY ii(Ccsr->row_offsets->size()); 3005fcdce8c4SStefano Zampini THRUSTINTARRAY jj(Ccsr->column_indices->size()); 3006fcdce8c4SStefano Zampini ii = *Ccsr->row_offsets; 3007fcdce8c4SStefano Zampini jj = *Ccsr->column_indices; 3008fcdce8c4SStefano Zampini if (ciscompressed) d_i = c->compressedrow.i; 30099566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(d_i, ii.data().get(), Ccsr->row_offsets->size() * sizeof(PetscInt), cudaMemcpyDeviceToHost)); 30109566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(c->j, jj.data().get(), Ccsr->column_indices->size() * sizeof(PetscInt), cudaMemcpyDeviceToHost)); 3011fcdce8c4SStefano Zampini } else { 3012fcdce8c4SStefano Zampini PetscInt *d_i = c->i; 3013fcdce8c4SStefano Zampini if (ciscompressed) d_i = c->compressedrow.i; 30149566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(d_i, Ccsr->row_offsets->data().get(), Ccsr->row_offsets->size() * sizeof(PetscInt), cudaMemcpyDeviceToHost)); 30159566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(c->j, Ccsr->column_indices->data().get(), Ccsr->column_indices->size() * sizeof(PetscInt), cudaMemcpyDeviceToHost)); 3016fcdce8c4SStefano Zampini } 3017fcdce8c4SStefano Zampini if (ciscompressed) { /* need to expand host row offsets */ 3018fcdce8c4SStefano Zampini PetscInt r = 0; 3019fcdce8c4SStefano Zampini c->i[0] = 0; 3020fcdce8c4SStefano Zampini for (k = 0; k < c->compressedrow.nrows; k++) { 3021fcdce8c4SStefano Zampini const PetscInt next = c->compressedrow.rindex[k]; 3022fcdce8c4SStefano Zampini const PetscInt old = c->compressedrow.i[k]; 3023fcdce8c4SStefano Zampini for (; r < next; r++) c->i[r + 1] = old; 3024fcdce8c4SStefano Zampini } 3025fcdce8c4SStefano Zampini for (; r < m; r++) c->i[r + 1] = c->compressedrow.i[c->compressedrow.nrows]; 3026fcdce8c4SStefano Zampini } 30279566063dSJacob Faibussowitsch PetscCall(PetscLogGpuToCpu((Ccsr->column_indices->size() + Ccsr->row_offsets->size()) * sizeof(PetscInt))); 30289566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m, &c->ilen)); 30299566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m, &c->imax)); 3030fcdce8c4SStefano Zampini c->maxnz = c->nz; 3031fcdce8c4SStefano Zampini c->nonzerorowcnt = 0; 3032fcdce8c4SStefano Zampini c->rmax = 0; 3033fcdce8c4SStefano Zampini for (k = 0; k < m; k++) { 3034fcdce8c4SStefano Zampini const PetscInt nn = c->i[k + 1] - c->i[k]; 3035fcdce8c4SStefano Zampini c->ilen[k] = c->imax[k] = nn; 3036fcdce8c4SStefano Zampini c->nonzerorowcnt += (PetscInt) !!nn; 3037fcdce8c4SStefano Zampini c->rmax = PetscMax(c->rmax, nn); 3038fcdce8c4SStefano Zampini } 30399566063dSJacob Faibussowitsch PetscCall(MatMarkDiagonal_SeqAIJ(C)); 30409566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(c->nz, &c->a)); 3041fcdce8c4SStefano Zampini Ccsr->num_entries = c->nz; 3042fcdce8c4SStefano Zampini 3043fcdce8c4SStefano Zampini C->nonzerostate++; 30449566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(C->rmap)); 30459566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(C->cmap)); 3046fcdce8c4SStefano Zampini Ccusp->nonzerostate = C->nonzerostate; 3047fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_UNALLOCATED; 3048fcdce8c4SStefano Zampini C->preallocated = PETSC_TRUE; 3049fcdce8c4SStefano Zampini C->assembled = PETSC_FALSE; 3050fcdce8c4SStefano Zampini C->was_assembled = PETSC_FALSE; 3051abb89eb1SStefano Zampini if (product->api_user && A->offloadmask == PETSC_OFFLOAD_BOTH && B->offloadmask == PETSC_OFFLOAD_BOTH) { /* flag the matrix C values as computed, so that the numeric phase will only call MatAssembly */ 3052fcdce8c4SStefano Zampini mmdata->reusesym = PETSC_TRUE; 3053fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_GPU; 3054fcdce8c4SStefano Zampini } 3055fcdce8c4SStefano Zampini C->ops->productnumeric = MatProductNumeric_SeqAIJCUSPARSE_SeqAIJCUSPARSE; 30563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3057fcdce8c4SStefano Zampini } 3058fcdce8c4SStefano Zampini 3059fcdce8c4SStefano Zampini PETSC_INTERN PetscErrorCode MatProductSetFromOptions_SeqAIJ_SeqDense(Mat); 3060fcdce8c4SStefano Zampini 3061fcdce8c4SStefano Zampini /* handles sparse or dense B */ 3062d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_SeqAIJCUSPARSE(Mat mat) 3063d71ae5a4SJacob Faibussowitsch { 3064fcdce8c4SStefano Zampini Mat_Product *product = mat->product; 3065fcdce8c4SStefano Zampini PetscBool isdense = PETSC_FALSE, Biscusp = PETSC_FALSE, Ciscusp = PETSC_TRUE; 3066fcdce8c4SStefano Zampini 3067fcdce8c4SStefano Zampini PetscFunctionBegin; 3068fcdce8c4SStefano Zampini MatCheckProduct(mat, 1); 30699566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)product->B, MATSEQDENSE, &isdense)); 307048a46eb9SPierre Jolivet if (!product->A->boundtocpu && !product->B->boundtocpu) PetscCall(PetscObjectTypeCompare((PetscObject)product->B, MATSEQAIJCUSPARSE, &Biscusp)); 3071fcdce8c4SStefano Zampini if (product->type == MATPRODUCT_ABC) { 3072fcdce8c4SStefano Zampini Ciscusp = PETSC_FALSE; 307348a46eb9SPierre Jolivet if (!product->C->boundtocpu) PetscCall(PetscObjectTypeCompare((PetscObject)product->C, MATSEQAIJCUSPARSE, &Ciscusp)); 3074fcdce8c4SStefano Zampini } 307565e4b4d4SStefano Zampini if (Biscusp && Ciscusp) { /* we can always select the CPU backend */ 307665e4b4d4SStefano Zampini PetscBool usecpu = PETSC_FALSE; 307765e4b4d4SStefano Zampini switch (product->type) { 307865e4b4d4SStefano Zampini case MATPRODUCT_AB: 307965e4b4d4SStefano Zampini if (product->api_user) { 3080d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatMatMult", "Mat"); 30819566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-matmatmult_backend_cpu", "Use CPU code", "MatMatMult", usecpu, &usecpu, NULL)); 3082d0609cedSBarry Smith PetscOptionsEnd(); 308365e4b4d4SStefano Zampini } else { 3084d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatProduct_AB", "Mat"); 30859566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mat_product_algorithm_backend_cpu", "Use CPU code", "MatMatMult", usecpu, &usecpu, NULL)); 3086d0609cedSBarry Smith PetscOptionsEnd(); 308765e4b4d4SStefano Zampini } 308865e4b4d4SStefano Zampini break; 308965e4b4d4SStefano Zampini case MATPRODUCT_AtB: 309065e4b4d4SStefano Zampini if (product->api_user) { 3091d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatTransposeMatMult", "Mat"); 30929566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mattransposematmult_backend_cpu", "Use CPU code", "MatTransposeMatMult", usecpu, &usecpu, NULL)); 3093d0609cedSBarry Smith PetscOptionsEnd(); 309465e4b4d4SStefano Zampini } else { 3095d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatProduct_AtB", "Mat"); 30969566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mat_product_algorithm_backend_cpu", "Use CPU code", "MatTransposeMatMult", usecpu, &usecpu, NULL)); 3097d0609cedSBarry Smith PetscOptionsEnd(); 309865e4b4d4SStefano Zampini } 309965e4b4d4SStefano Zampini break; 310065e4b4d4SStefano Zampini case MATPRODUCT_PtAP: 310165e4b4d4SStefano Zampini if (product->api_user) { 3102d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatPtAP", "Mat"); 31039566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-matptap_backend_cpu", "Use CPU code", "MatPtAP", usecpu, &usecpu, NULL)); 3104d0609cedSBarry Smith PetscOptionsEnd(); 310565e4b4d4SStefano Zampini } else { 3106d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatProduct_PtAP", "Mat"); 31079566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mat_product_algorithm_backend_cpu", "Use CPU code", "MatPtAP", usecpu, &usecpu, NULL)); 3108d0609cedSBarry Smith PetscOptionsEnd(); 310965e4b4d4SStefano Zampini } 311065e4b4d4SStefano Zampini break; 311165e4b4d4SStefano Zampini case MATPRODUCT_RARt: 311265e4b4d4SStefano Zampini if (product->api_user) { 3113d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatRARt", "Mat"); 31149566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-matrart_backend_cpu", "Use CPU code", "MatRARt", usecpu, &usecpu, NULL)); 3115d0609cedSBarry Smith PetscOptionsEnd(); 311665e4b4d4SStefano Zampini } else { 3117d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatProduct_RARt", "Mat"); 31189566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mat_product_algorithm_backend_cpu", "Use CPU code", "MatRARt", usecpu, &usecpu, NULL)); 3119d0609cedSBarry Smith PetscOptionsEnd(); 312065e4b4d4SStefano Zampini } 312165e4b4d4SStefano Zampini break; 312265e4b4d4SStefano Zampini case MATPRODUCT_ABC: 312365e4b4d4SStefano Zampini if (product->api_user) { 3124d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatMatMatMult", "Mat"); 31259566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-matmatmatmult_backend_cpu", "Use CPU code", "MatMatMatMult", usecpu, &usecpu, NULL)); 3126d0609cedSBarry Smith PetscOptionsEnd(); 312765e4b4d4SStefano Zampini } else { 3128d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatProduct_ABC", "Mat"); 31299566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mat_product_algorithm_backend_cpu", "Use CPU code", "MatMatMatMult", usecpu, &usecpu, NULL)); 3130d0609cedSBarry Smith PetscOptionsEnd(); 313165e4b4d4SStefano Zampini } 313265e4b4d4SStefano Zampini break; 3133d71ae5a4SJacob Faibussowitsch default: 3134d71ae5a4SJacob Faibussowitsch break; 313565e4b4d4SStefano Zampini } 313665e4b4d4SStefano Zampini if (usecpu) Biscusp = Ciscusp = PETSC_FALSE; 313765e4b4d4SStefano Zampini } 313865e4b4d4SStefano Zampini /* dispatch */ 3139fcdce8c4SStefano Zampini if (isdense) { 3140ccdfe979SStefano Zampini switch (product->type) { 3141ccdfe979SStefano Zampini case MATPRODUCT_AB: 3142ccdfe979SStefano Zampini case MATPRODUCT_AtB: 3143ccdfe979SStefano Zampini case MATPRODUCT_ABt: 3144ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 3145ccdfe979SStefano Zampini case MATPRODUCT_RARt: 3146fcdce8c4SStefano Zampini if (product->A->boundtocpu) { 31479566063dSJacob Faibussowitsch PetscCall(MatProductSetFromOptions_SeqAIJ_SeqDense(mat)); 3148fcdce8c4SStefano Zampini } else { 3149fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_SeqAIJCUSPARSE_SeqDENSECUDA; 3150fcdce8c4SStefano Zampini } 3151fcdce8c4SStefano Zampini break; 3152d71ae5a4SJacob Faibussowitsch case MATPRODUCT_ABC: 3153d71ae5a4SJacob Faibussowitsch mat->ops->productsymbolic = MatProductSymbolic_ABC_Basic; 3154d71ae5a4SJacob Faibussowitsch break; 3155d71ae5a4SJacob Faibussowitsch default: 3156d71ae5a4SJacob Faibussowitsch break; 3157ccdfe979SStefano Zampini } 3158fcdce8c4SStefano Zampini } else if (Biscusp && Ciscusp) { 3159fcdce8c4SStefano Zampini switch (product->type) { 3160fcdce8c4SStefano Zampini case MATPRODUCT_AB: 3161fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 3162d71ae5a4SJacob Faibussowitsch case MATPRODUCT_ABt: 3163d71ae5a4SJacob Faibussowitsch mat->ops->productsymbolic = MatProductSymbolic_SeqAIJCUSPARSE_SeqAIJCUSPARSE; 3164d71ae5a4SJacob Faibussowitsch break; 3165fcdce8c4SStefano Zampini case MATPRODUCT_PtAP: 3166fcdce8c4SStefano Zampini case MATPRODUCT_RARt: 3167d71ae5a4SJacob Faibussowitsch case MATPRODUCT_ABC: 3168d71ae5a4SJacob Faibussowitsch mat->ops->productsymbolic = MatProductSymbolic_ABC_Basic; 3169d71ae5a4SJacob Faibussowitsch break; 3170d71ae5a4SJacob Faibussowitsch default: 3171d71ae5a4SJacob Faibussowitsch break; 3172fcdce8c4SStefano Zampini } 3173fcdce8c4SStefano Zampini } else { /* fallback for AIJ */ 31749566063dSJacob Faibussowitsch PetscCall(MatProductSetFromOptions_SeqAIJ(mat)); 3175fcdce8c4SStefano Zampini } 31763ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3177ccdfe979SStefano Zampini } 3178ccdfe979SStefano Zampini 3179d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMult_SeqAIJCUSPARSE(Mat A, Vec xx, Vec yy) 3180d71ae5a4SJacob Faibussowitsch { 31819ae82921SPaul Mullowney PetscFunctionBegin; 31829566063dSJacob Faibussowitsch PetscCall(MatMultAddKernel_SeqAIJCUSPARSE(A, xx, NULL, yy, PETSC_FALSE, PETSC_FALSE)); 31833ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3184e6e9a74fSStefano Zampini } 3185e6e9a74fSStefano Zampini 3186d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultAdd_SeqAIJCUSPARSE(Mat A, Vec xx, Vec yy, Vec zz) 3187d71ae5a4SJacob Faibussowitsch { 3188e6e9a74fSStefano Zampini PetscFunctionBegin; 31899566063dSJacob Faibussowitsch PetscCall(MatMultAddKernel_SeqAIJCUSPARSE(A, xx, yy, zz, PETSC_FALSE, PETSC_FALSE)); 31903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3191e6e9a74fSStefano Zampini } 3192e6e9a74fSStefano Zampini 3193d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultHermitianTranspose_SeqAIJCUSPARSE(Mat A, Vec xx, Vec yy) 3194d71ae5a4SJacob Faibussowitsch { 3195e6e9a74fSStefano Zampini PetscFunctionBegin; 31969566063dSJacob Faibussowitsch PetscCall(MatMultAddKernel_SeqAIJCUSPARSE(A, xx, NULL, yy, PETSC_TRUE, PETSC_TRUE)); 31973ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3198e6e9a74fSStefano Zampini } 3199e6e9a74fSStefano Zampini 3200d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultHermitianTransposeAdd_SeqAIJCUSPARSE(Mat A, Vec xx, Vec yy, Vec zz) 3201d71ae5a4SJacob Faibussowitsch { 3202e6e9a74fSStefano Zampini PetscFunctionBegin; 32039566063dSJacob Faibussowitsch PetscCall(MatMultAddKernel_SeqAIJCUSPARSE(A, xx, yy, zz, PETSC_TRUE, PETSC_TRUE)); 32043ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 32059ae82921SPaul Mullowney } 32069ae82921SPaul Mullowney 3207d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultTranspose_SeqAIJCUSPARSE(Mat A, Vec xx, Vec yy) 3208d71ae5a4SJacob Faibussowitsch { 3209ca45077fSPaul Mullowney PetscFunctionBegin; 32109566063dSJacob Faibussowitsch PetscCall(MatMultAddKernel_SeqAIJCUSPARSE(A, xx, NULL, yy, PETSC_TRUE, PETSC_FALSE)); 32113ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3212ca45077fSPaul Mullowney } 3213ca45077fSPaul Mullowney 3214d71ae5a4SJacob Faibussowitsch __global__ static void ScatterAdd(PetscInt n, PetscInt *idx, const PetscScalar *x, PetscScalar *y) 3215d71ae5a4SJacob Faibussowitsch { 3216a0e72f99SJunchao Zhang int i = blockIdx.x * blockDim.x + threadIdx.x; 3217a0e72f99SJunchao Zhang if (i < n) y[idx[i]] += x[i]; 3218a0e72f99SJunchao Zhang } 3219a0e72f99SJunchao Zhang 3220afb2bd1cSJunchao Zhang /* z = op(A) x + y. If trans & !herm, op = ^T; if trans & herm, op = ^H; if !trans, op = no-op */ 3221d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultAddKernel_SeqAIJCUSPARSE(Mat A, Vec xx, Vec yy, Vec zz, PetscBool trans, PetscBool herm) 3222d71ae5a4SJacob Faibussowitsch { 32239ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 3224aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE *)A->spptr; 32259ff858a8SKarl Rupp Mat_SeqAIJCUSPARSEMultStruct *matstruct; 3226e6e9a74fSStefano Zampini PetscScalar *xarray, *zarray, *dptr, *beta, *xptr; 3227e6e9a74fSStefano Zampini cusparseOperation_t opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 3228e6e9a74fSStefano Zampini PetscBool compressed; 3229afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 3230afb2bd1cSJunchao Zhang PetscInt nx, ny; 3231afb2bd1cSJunchao Zhang #endif 32326e111a19SKarl Rupp 32339ae82921SPaul Mullowney PetscFunctionBegin; 323408401ef6SPierre Jolivet PetscCheck(!herm || trans, PetscObjectComm((PetscObject)A), PETSC_ERR_GPU, "Hermitian and not transpose not supported"); 3235cbc6b225SStefano Zampini if (!a->nz) { 3236995bce04SJacob Faibussowitsch if (yy) PetscCall(VecSeq_CUDA::Copy(yy, zz)); 3237995bce04SJacob Faibussowitsch else PetscCall(VecSeq_CUDA::Set(zz, 0)); 32383ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3239e6e9a74fSStefano Zampini } 324034d6c7a5SJose E. Roman /* The line below is necessary due to the operations that modify the matrix on the CPU (axpy, scale, etc) */ 32419566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 3242e6e9a74fSStefano Zampini if (!trans) { 32439ff858a8SKarl Rupp matstruct = (Mat_SeqAIJCUSPARSEMultStruct *)cusparsestruct->mat; 32445f80ce2aSJacob Faibussowitsch PetscCheck(matstruct, PetscObjectComm((PetscObject)A), PETSC_ERR_GPU, "SeqAIJCUSPARSE does not have a 'mat' (need to fix)"); 3245e6e9a74fSStefano Zampini } else { 32461a2c6b5cSJunchao Zhang if (herm || !A->form_explicit_transpose) { 3247e6e9a74fSStefano Zampini opA = herm ? CUSPARSE_OPERATION_CONJUGATE_TRANSPOSE : CUSPARSE_OPERATION_TRANSPOSE; 3248e6e9a74fSStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct *)cusparsestruct->mat; 3249e6e9a74fSStefano Zampini } else { 32509566063dSJacob Faibussowitsch if (!cusparsestruct->matTranspose) PetscCall(MatSeqAIJCUSPARSEFormExplicitTranspose(A)); 3251e6e9a74fSStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct *)cusparsestruct->matTranspose; 3252e6e9a74fSStefano Zampini } 3253e6e9a74fSStefano Zampini } 3254e6e9a74fSStefano Zampini /* Does the matrix use compressed rows (i.e., drop zero rows)? */ 3255e6e9a74fSStefano Zampini compressed = matstruct->cprowIndices ? PETSC_TRUE : PETSC_FALSE; 3256213423ffSJunchao Zhang 3257e6e9a74fSStefano Zampini try { 32589566063dSJacob Faibussowitsch PetscCall(VecCUDAGetArrayRead(xx, (const PetscScalar **)&xarray)); 325969d47153SPierre Jolivet if (yy == zz) PetscCall(VecCUDAGetArray(zz, &zarray)); /* read & write zz, so need to get up-to-date zarray on GPU */ 32609566063dSJacob Faibussowitsch else PetscCall(VecCUDAGetArrayWrite(zz, &zarray)); /* write zz, so no need to init zarray on GPU */ 3261afb2bd1cSJunchao Zhang 32629566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 3263e6e9a74fSStefano Zampini if (opA == CUSPARSE_OPERATION_NON_TRANSPOSE) { 3264afb2bd1cSJunchao Zhang /* z = A x + beta y. 3265afb2bd1cSJunchao Zhang If A is compressed (with less rows), then Ax is shorter than the full z, so we need a work vector to store Ax. 3266afb2bd1cSJunchao Zhang When A is non-compressed, and z = y, we can set beta=1 to compute y = Ax + y in one call. 3267afb2bd1cSJunchao Zhang */ 3268e6e9a74fSStefano Zampini xptr = xarray; 3269afb2bd1cSJunchao Zhang dptr = compressed ? cusparsestruct->workVector->data().get() : zarray; 3270213423ffSJunchao Zhang beta = (yy == zz && !compressed) ? matstruct->beta_one : matstruct->beta_zero; 3271afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 3272afb2bd1cSJunchao Zhang /* Get length of x, y for y=Ax. ny might be shorter than the work vector's allocated length, since the work vector is 3273afb2bd1cSJunchao Zhang allocated to accommodate different uses. So we get the length info directly from mat. 3274afb2bd1cSJunchao Zhang */ 3275afb2bd1cSJunchao Zhang if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 3276afb2bd1cSJunchao Zhang CsrMatrix *mat = (CsrMatrix *)matstruct->mat; 3277afb2bd1cSJunchao Zhang nx = mat->num_cols; 3278afb2bd1cSJunchao Zhang ny = mat->num_rows; 3279afb2bd1cSJunchao Zhang } 3280afb2bd1cSJunchao Zhang #endif 3281e6e9a74fSStefano Zampini } else { 3282afb2bd1cSJunchao Zhang /* z = A^T x + beta y 3283afb2bd1cSJunchao Zhang If A is compressed, then we need a work vector as the shorter version of x to compute A^T x. 3284afb2bd1cSJunchao Zhang Note A^Tx is of full length, so we set beta to 1.0 if y exists. 3285afb2bd1cSJunchao Zhang */ 3286afb2bd1cSJunchao Zhang xptr = compressed ? cusparsestruct->workVector->data().get() : xarray; 3287e6e9a74fSStefano Zampini dptr = zarray; 3288e6e9a74fSStefano Zampini beta = yy ? matstruct->beta_one : matstruct->beta_zero; 3289afb2bd1cSJunchao Zhang if (compressed) { /* Scatter x to work vector */ 3290e6e9a74fSStefano Zampini thrust::device_ptr<PetscScalar> xarr = thrust::device_pointer_cast(xarray); 3291d0967f54SJacob Faibussowitsch 3292d0967f54SJacob Faibussowitsch thrust::for_each( 3293d0967f54SJacob Faibussowitsch #if PetscDefined(HAVE_THRUST_ASYNC) 3294d0967f54SJacob Faibussowitsch thrust::cuda::par.on(PetscDefaultCudaStream), 3295d0967f54SJacob Faibussowitsch #endif 3296d0967f54SJacob Faibussowitsch thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(xarr, matstruct->cprowIndices->begin()))), 32979371c9d4SSatish Balay thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(xarr, matstruct->cprowIndices->begin()))) + matstruct->cprowIndices->size(), VecCUDAEqualsReverse()); 3298e6e9a74fSStefano Zampini } 3299afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 3300afb2bd1cSJunchao Zhang if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 3301afb2bd1cSJunchao Zhang CsrMatrix *mat = (CsrMatrix *)matstruct->mat; 3302afb2bd1cSJunchao Zhang nx = mat->num_rows; 3303afb2bd1cSJunchao Zhang ny = mat->num_cols; 3304afb2bd1cSJunchao Zhang } 3305afb2bd1cSJunchao Zhang #endif 3306e6e9a74fSStefano Zampini } 33079ae82921SPaul Mullowney 3308afb2bd1cSJunchao Zhang /* csr_spmv does y = alpha op(A) x + beta y */ 3309aa372e3fSPaul Mullowney if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 3310afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 33115f80ce2aSJacob Faibussowitsch PetscCheck(opA >= 0 && opA <= 2, PETSC_COMM_SELF, PETSC_ERR_SUP, "cuSPARSE ABI on cusparseOperation_t has changed and PETSc has not been updated accordingly"); 3312afb2bd1cSJunchao Zhang if (!matstruct->cuSpMV[opA].initialized) { /* built on demand */ 33139566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateDnVec(&matstruct->cuSpMV[opA].vecXDescr, nx, xptr, cusparse_scalartype)); 33149566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateDnVec(&matstruct->cuSpMV[opA].vecYDescr, ny, dptr, cusparse_scalartype)); 33159371c9d4SSatish Balay PetscCallCUSPARSE( 33169371c9d4SSatish Balay cusparseSpMV_bufferSize(cusparsestruct->handle, opA, matstruct->alpha_one, matstruct->matDescr, matstruct->cuSpMV[opA].vecXDescr, beta, matstruct->cuSpMV[opA].vecYDescr, cusparse_scalartype, cusparsestruct->spmvAlg, &matstruct->cuSpMV[opA].spmvBufferSize)); 33179566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&matstruct->cuSpMV[opA].spmvBuffer, matstruct->cuSpMV[opA].spmvBufferSize)); 3318afb2bd1cSJunchao Zhang 3319afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].initialized = PETSC_TRUE; 3320afb2bd1cSJunchao Zhang } else { 3321afb2bd1cSJunchao Zhang /* x, y's value pointers might change between calls, but their shape is kept, so we just update pointers */ 33229566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseDnVecSetValues(matstruct->cuSpMV[opA].vecXDescr, xptr)); 33239566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseDnVecSetValues(matstruct->cuSpMV[opA].vecYDescr, dptr)); 3324afb2bd1cSJunchao Zhang } 3325afb2bd1cSJunchao Zhang 33269371c9d4SSatish Balay PetscCallCUSPARSE(cusparseSpMV(cusparsestruct->handle, opA, matstruct->alpha_one, matstruct->matDescr, /* built in MatSeqAIJCUSPARSECopyToGPU() or MatSeqAIJCUSPARSEFormExplicitTranspose() */ 33279371c9d4SSatish Balay matstruct->cuSpMV[opA].vecXDescr, beta, matstruct->cuSpMV[opA].vecYDescr, cusparse_scalartype, cusparsestruct->spmvAlg, matstruct->cuSpMV[opA].spmvBuffer)); 3328afb2bd1cSJunchao Zhang #else 33297656d835SStefano Zampini CsrMatrix *mat = (CsrMatrix *)matstruct->mat; 33309371c9d4SSatish Balay PetscCallCUSPARSE(cusparse_csr_spmv(cusparsestruct->handle, opA, mat->num_rows, mat->num_cols, mat->num_entries, matstruct->alpha_one, matstruct->descr, mat->values->data().get(), mat->row_offsets->data().get(), mat->column_indices->data().get(), xptr, beta, dptr)); 3331afb2bd1cSJunchao Zhang #endif 3332aa372e3fSPaul Mullowney } else { 3333213423ffSJunchao Zhang if (cusparsestruct->nrows) { 3334afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 3335afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 3336afb2bd1cSJunchao Zhang #else 3337301298b4SMark Adams cusparseHybMat_t hybMat = (cusparseHybMat_t)matstruct->mat; 33389371c9d4SSatish Balay PetscCallCUSPARSE(cusparse_hyb_spmv(cusparsestruct->handle, opA, matstruct->alpha_one, matstruct->descr, hybMat, xptr, beta, dptr)); 3339afb2bd1cSJunchao Zhang #endif 3340a65300a6SPaul Mullowney } 3341aa372e3fSPaul Mullowney } 33429566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 3343aa372e3fSPaul Mullowney 3344e6e9a74fSStefano Zampini if (opA == CUSPARSE_OPERATION_NON_TRANSPOSE) { 3345213423ffSJunchao Zhang if (yy) { /* MatMultAdd: zz = A*xx + yy */ 3346213423ffSJunchao Zhang if (compressed) { /* A is compressed. We first copy yy to zz, then ScatterAdd the work vector to zz */ 3347995bce04SJacob Faibussowitsch PetscCall(VecSeq_CUDA::Copy(yy, zz)); /* zz = yy */ 3348e6e9a74fSStefano Zampini } else if (zz != yy) { /* A is not compressed. zz already contains A*xx, and we just need to add yy */ 3349995bce04SJacob Faibussowitsch PetscCall(VecSeq_CUDA::AXPY(zz, 1.0, yy)); /* zz += yy */ 33507656d835SStefano Zampini } 3351213423ffSJunchao Zhang } else if (compressed) { /* MatMult: zz = A*xx. A is compressed, so we zero zz first, then ScatterAdd the work vector to zz */ 3352995bce04SJacob Faibussowitsch PetscCall(VecSeq_CUDA::Set(zz, 0)); 33537656d835SStefano Zampini } 33547656d835SStefano Zampini 3355213423ffSJunchao Zhang /* ScatterAdd the result from work vector into the full vector when A is compressed */ 3356213423ffSJunchao Zhang if (compressed) { 33579566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 3358da81f932SPierre Jolivet /* I wanted to make this for_each asynchronous but failed. thrust::async::for_each() returns an event (internally registered) 3359a0e72f99SJunchao Zhang and in the destructor of the scope, it will call cudaStreamSynchronize() on this stream. One has to store all events to 3360a0e72f99SJunchao Zhang prevent that. So I just add a ScatterAdd kernel. 3361a0e72f99SJunchao Zhang */ 3362a0e72f99SJunchao Zhang #if 0 3363a0e72f99SJunchao Zhang thrust::device_ptr<PetscScalar> zptr = thrust::device_pointer_cast(zarray); 3364a0e72f99SJunchao Zhang thrust::async::for_each(thrust::cuda::par.on(cusparsestruct->stream), 3365a0e72f99SJunchao Zhang thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(zptr, matstruct->cprowIndices->begin()))), 3366e6e9a74fSStefano Zampini thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(zptr, matstruct->cprowIndices->begin()))) + matstruct->cprowIndices->size(), 3367c41cb2e2SAlejandro Lamas Daviña VecCUDAPlusEquals()); 3368a0e72f99SJunchao Zhang #else 3369a0e72f99SJunchao Zhang PetscInt n = matstruct->cprowIndices->size(); 3370a0e72f99SJunchao Zhang ScatterAdd<<<(n + 255) / 256, 256, 0, PetscDefaultCudaStream>>>(n, matstruct->cprowIndices->data().get(), cusparsestruct->workVector->data().get(), zarray); 3371a0e72f99SJunchao Zhang #endif 33729566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 3373e6e9a74fSStefano Zampini } 3374e6e9a74fSStefano Zampini } else { 3375995bce04SJacob Faibussowitsch if (yy && yy != zz) PetscCall(VecSeq_CUDA::AXPY(zz, 1.0, yy)); /* zz += yy */ 3376e6e9a74fSStefano Zampini } 33779566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayRead(xx, (const PetscScalar **)&xarray)); 33789566063dSJacob Faibussowitsch if (yy == zz) PetscCall(VecCUDARestoreArray(zz, &zarray)); 33799566063dSJacob Faibussowitsch else PetscCall(VecCUDARestoreArrayWrite(zz, &zarray)); 3380d71ae5a4SJacob Faibussowitsch } catch (char *ex) { 3381d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_LIB, "CUSPARSE error: %s", ex); 3382d71ae5a4SJacob Faibussowitsch } 3383e6e9a74fSStefano Zampini if (yy) { 33849566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0 * a->nz)); 3385e6e9a74fSStefano Zampini } else { 33869566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0 * a->nz - a->nonzerorowcnt)); 3387e6e9a74fSStefano Zampini } 33883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 33899ae82921SPaul Mullowney } 33909ae82921SPaul Mullowney 3391d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultTransposeAdd_SeqAIJCUSPARSE(Mat A, Vec xx, Vec yy, Vec zz) 3392d71ae5a4SJacob Faibussowitsch { 3393ca45077fSPaul Mullowney PetscFunctionBegin; 33949566063dSJacob Faibussowitsch PetscCall(MatMultAddKernel_SeqAIJCUSPARSE(A, xx, yy, zz, PETSC_TRUE, PETSC_FALSE)); 33953ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3396ca45077fSPaul Mullowney } 3397ca45077fSPaul Mullowney 3398d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatAssemblyEnd_SeqAIJCUSPARSE(Mat A, MatAssemblyType mode) 3399d71ae5a4SJacob Faibussowitsch { 3400042217e8SBarry Smith PetscObjectState onnz = A->nonzerostate; 3401042217e8SBarry Smith Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE *)A->spptr; 34023fa6b06aSMark Adams 3403042217e8SBarry Smith PetscFunctionBegin; 34049566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd_SeqAIJ(A, mode)); 3405042217e8SBarry Smith if (onnz != A->nonzerostate && cusp->deviceMat) { 34069566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Destroy device mat since nonzerostate changed\n")); 34079566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(cusp->deviceMat)); 3408042217e8SBarry Smith cusp->deviceMat = NULL; 3409042217e8SBarry Smith } 34103ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 34119ae82921SPaul Mullowney } 34129ae82921SPaul Mullowney 3413e057df02SPaul Mullowney /*@ 341411a5261eSBarry Smith MatCreateSeqAIJCUSPARSE - Creates a sparse matrix in `MATAIJCUSPARSE` (compressed row) format 3415e057df02SPaul Mullowney (the default parallel PETSc format). This matrix will ultimately pushed down 341611a5261eSBarry Smith to NVIDIA GPUs and use the CuSPARSE library for calculations. For good matrix 3417e057df02SPaul Mullowney assembly performance the user should preallocate the matrix storage by setting 3418*20f4b53cSBarry Smith the parameter `nz` (or the array `nnz`). 34199ae82921SPaul Mullowney 3420d083f849SBarry Smith Collective 34219ae82921SPaul Mullowney 34229ae82921SPaul Mullowney Input Parameters: 342311a5261eSBarry Smith + comm - MPI communicator, set to `PETSC_COMM_SELF` 34249ae82921SPaul Mullowney . m - number of rows 34259ae82921SPaul Mullowney . n - number of columns 3426*20f4b53cSBarry Smith . nz - number of nonzeros per row (same for all rows), ignored if `nnz` is provide 3427*20f4b53cSBarry Smith - nnz - array containing the number of nonzeros in the various rows (possibly different for each row) or `NULL` 34289ae82921SPaul Mullowney 34299ae82921SPaul Mullowney Output Parameter: 34309ae82921SPaul Mullowney . A - the matrix 34319ae82921SPaul Mullowney 34322ef1f0ffSBarry Smith Level: intermediate 34332ef1f0ffSBarry Smith 34342ef1f0ffSBarry Smith Notes: 343511a5261eSBarry Smith It is recommended that one use the `MatCreate()`, `MatSetType()` and/or `MatSetFromOptions()`, 34369ae82921SPaul Mullowney MatXXXXSetPreallocation() paradgm instead of this routine directly. 343711a5261eSBarry Smith [MatXXXXSetPreallocation() is, for example, `MatSeqAIJSetPreallocation()`] 34389ae82921SPaul Mullowney 343911a5261eSBarry Smith The AIJ format, also called 34402ef1f0ffSBarry Smith compressed row storage, is fully compatible with standard Fortran 34419ae82921SPaul Mullowney storage. That is, the stored row and column indices can begin at 3442*20f4b53cSBarry Smith either one (as in Fortran) or zero. 34439ae82921SPaul Mullowney 34449ae82921SPaul Mullowney Specify the preallocated storage with either nz or nnz (not both). 34452ef1f0ffSBarry Smith Set `nz` = `PETSC_DEFAULT` and `nnz` = `NULL` for PETSc to control dynamic memory 3446*20f4b53cSBarry Smith allocation. 34479ae82921SPaul Mullowney 34482ef1f0ffSBarry Smith .seealso: [](chapter_matrices), `Mat`, `MATSEQAIJCUSPARSE`, `MatCreate()`, `MatCreateAIJ()`, `MatSetValues()`, `MatSeqAIJSetColumnIndices()`, `MatCreateSeqAIJWithArrays()`, `MatCreateAIJ()`, `MATSEQAIJCUSPARSE`, `MATAIJCUSPARSE` 34499ae82921SPaul Mullowney @*/ 3450d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateSeqAIJCUSPARSE(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt nz, const PetscInt nnz[], Mat *A) 3451d71ae5a4SJacob Faibussowitsch { 34529ae82921SPaul Mullowney PetscFunctionBegin; 34539566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, A)); 34549566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*A, m, n, m, n)); 34559566063dSJacob Faibussowitsch PetscCall(MatSetType(*A, MATSEQAIJCUSPARSE)); 34569566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation_SeqAIJ(*A, nz, (PetscInt *)nnz)); 34573ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 34589ae82921SPaul Mullowney } 34599ae82921SPaul Mullowney 3460d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDestroy_SeqAIJCUSPARSE(Mat A) 3461d71ae5a4SJacob Faibussowitsch { 34629ae82921SPaul Mullowney PetscFunctionBegin; 34639ae82921SPaul Mullowney if (A->factortype == MAT_FACTOR_NONE) { 34649566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSE_Destroy((Mat_SeqAIJCUSPARSE **)&A->spptr)); 34659ae82921SPaul Mullowney } else { 34669566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSETriFactors_Destroy((Mat_SeqAIJCUSPARSETriFactors **)&A->spptr)); 3467aa372e3fSPaul Mullowney } 34689566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSeqAIJCopySubArray_C", NULL)); 34699566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatCUSPARSESetFormat_C", NULL)); 34709566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatCUSPARSESetUseCPUSolve_C", NULL)); 34719566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C", NULL)); 34729566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_seqaijcusparse_seqdense_C", NULL)); 34739566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C", NULL)); 34749566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatFactorGetSolverType_C", NULL)); 34759566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetPreallocationCOO_C", NULL)); 34769566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetValuesCOO_C", NULL)); 34779566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatConvert_seqaijcusparse_hypre_C", NULL)); 34789566063dSJacob Faibussowitsch PetscCall(MatDestroy_SeqAIJ(A)); 34793ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 34809ae82921SPaul Mullowney } 34819ae82921SPaul Mullowney 3482ccdfe979SStefano Zampini PETSC_INTERN PetscErrorCode MatConvert_SeqAIJ_SeqAIJCUSPARSE(Mat, MatType, MatReuse, Mat *); 348395639643SRichard Tran Mills static PetscErrorCode MatBindToCPU_SeqAIJCUSPARSE(Mat, PetscBool); 3484d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDuplicate_SeqAIJCUSPARSE(Mat A, MatDuplicateOption cpvalues, Mat *B) 3485d71ae5a4SJacob Faibussowitsch { 34869ff858a8SKarl Rupp PetscFunctionBegin; 34879566063dSJacob Faibussowitsch PetscCall(MatDuplicate_SeqAIJ(A, cpvalues, B)); 34889566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqAIJ_SeqAIJCUSPARSE(*B, MATSEQAIJCUSPARSE, MAT_INPLACE_MATRIX, B)); 34893ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 34909ff858a8SKarl Rupp } 34919ff858a8SKarl Rupp 3492d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatAXPY_SeqAIJCUSPARSE(Mat Y, PetscScalar a, Mat X, MatStructure str) 3493d71ae5a4SJacob Faibussowitsch { 3494a587d139SMark Mat_SeqAIJ *x = (Mat_SeqAIJ *)X->data, *y = (Mat_SeqAIJ *)Y->data; 3495039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cy; 3496039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cx; 3497039c6fbaSStefano Zampini PetscScalar *ay; 3498039c6fbaSStefano Zampini const PetscScalar *ax; 3499039c6fbaSStefano Zampini CsrMatrix *csry, *csrx; 3500e6e9a74fSStefano Zampini 350195639643SRichard Tran Mills PetscFunctionBegin; 3502a49f1ed0SStefano Zampini cy = (Mat_SeqAIJCUSPARSE *)Y->spptr; 3503a49f1ed0SStefano Zampini cx = (Mat_SeqAIJCUSPARSE *)X->spptr; 3504039c6fbaSStefano Zampini if (X->ops->axpy != Y->ops->axpy) { 35059566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(Y, PETSC_FALSE)); 35069566063dSJacob Faibussowitsch PetscCall(MatAXPY_SeqAIJ(Y, a, X, str)); 35073ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 350895639643SRichard Tran Mills } 3509039c6fbaSStefano Zampini /* if we are here, it means both matrices are bound to GPU */ 35109566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(Y)); 35119566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(X)); 35125f80ce2aSJacob Faibussowitsch PetscCheck(cy->format == MAT_CUSPARSE_CSR, PetscObjectComm((PetscObject)Y), PETSC_ERR_GPU, "only MAT_CUSPARSE_CSR supported"); 35135f80ce2aSJacob Faibussowitsch PetscCheck(cx->format == MAT_CUSPARSE_CSR, PetscObjectComm((PetscObject)X), PETSC_ERR_GPU, "only MAT_CUSPARSE_CSR supported"); 3514039c6fbaSStefano Zampini csry = (CsrMatrix *)cy->mat->mat; 3515039c6fbaSStefano Zampini csrx = (CsrMatrix *)cx->mat->mat; 3516039c6fbaSStefano Zampini /* see if we can turn this into a cublas axpy */ 3517039c6fbaSStefano Zampini if (str != SAME_NONZERO_PATTERN && x->nz == y->nz && !x->compressedrow.use && !y->compressedrow.use) { 3518039c6fbaSStefano Zampini bool eq = thrust::equal(thrust::device, csry->row_offsets->begin(), csry->row_offsets->end(), csrx->row_offsets->begin()); 3519ad540459SPierre Jolivet if (eq) eq = thrust::equal(thrust::device, csry->column_indices->begin(), csry->column_indices->end(), csrx->column_indices->begin()); 3520039c6fbaSStefano Zampini if (eq) str = SAME_NONZERO_PATTERN; 3521039c6fbaSStefano Zampini } 3522d2be01edSStefano Zampini /* spgeam is buggy with one column */ 3523d2be01edSStefano Zampini if (Y->cmap->n == 1 && str != SAME_NONZERO_PATTERN) str = DIFFERENT_NONZERO_PATTERN; 3524039c6fbaSStefano Zampini 3525039c6fbaSStefano Zampini if (str == SUBSET_NONZERO_PATTERN) { 3526039c6fbaSStefano Zampini PetscScalar b = 1.0; 3527039c6fbaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 3528039c6fbaSStefano Zampini size_t bufferSize; 3529039c6fbaSStefano Zampini void *buffer; 3530039c6fbaSStefano Zampini #endif 3531039c6fbaSStefano Zampini 35329566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEGetArrayRead(X, &ax)); 35339566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEGetArray(Y, &ay)); 35349566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetPointerMode(cy->handle, CUSPARSE_POINTER_MODE_HOST)); 3535039c6fbaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 35369371c9d4SSatish Balay PetscCallCUSPARSE(cusparse_csr_spgeam_bufferSize(cy->handle, Y->rmap->n, Y->cmap->n, &a, cx->mat->descr, x->nz, ax, csrx->row_offsets->data().get(), csrx->column_indices->data().get(), &b, cy->mat->descr, y->nz, ay, csry->row_offsets->data().get(), 35379371c9d4SSatish Balay csry->column_indices->data().get(), cy->mat->descr, ay, csry->row_offsets->data().get(), csry->column_indices->data().get(), &bufferSize)); 35389566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc(&buffer, bufferSize)); 35399566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 35409371c9d4SSatish Balay PetscCallCUSPARSE(cusparse_csr_spgeam(cy->handle, Y->rmap->n, Y->cmap->n, &a, cx->mat->descr, x->nz, ax, csrx->row_offsets->data().get(), csrx->column_indices->data().get(), &b, cy->mat->descr, y->nz, ay, csry->row_offsets->data().get(), 35419371c9d4SSatish Balay csry->column_indices->data().get(), cy->mat->descr, ay, csry->row_offsets->data().get(), csry->column_indices->data().get(), buffer)); 35429566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(x->nz + y->nz)); 35439566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 35449566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(buffer)); 3545039c6fbaSStefano Zampini #else 35469566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 35479371c9d4SSatish Balay PetscCallCUSPARSE(cusparse_csr_spgeam(cy->handle, Y->rmap->n, Y->cmap->n, &a, cx->mat->descr, x->nz, ax, csrx->row_offsets->data().get(), csrx->column_indices->data().get(), &b, cy->mat->descr, y->nz, ay, csry->row_offsets->data().get(), 35489371c9d4SSatish Balay csry->column_indices->data().get(), cy->mat->descr, ay, csry->row_offsets->data().get(), csry->column_indices->data().get())); 35499566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(x->nz + y->nz)); 35509566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 3551039c6fbaSStefano Zampini #endif 35529566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetPointerMode(cy->handle, CUSPARSE_POINTER_MODE_DEVICE)); 35539566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSERestoreArrayRead(X, &ax)); 35549566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSERestoreArray(Y, &ay)); 35559566063dSJacob Faibussowitsch PetscCall(MatSeqAIJInvalidateDiagonal(Y)); 3556039c6fbaSStefano Zampini } else if (str == SAME_NONZERO_PATTERN) { 3557a587d139SMark cublasHandle_t cublasv2handle; 3558a587d139SMark PetscBLASInt one = 1, bnz = 1; 3559039c6fbaSStefano Zampini 35609566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEGetArrayRead(X, &ax)); 35619566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEGetArray(Y, &ay)); 35629566063dSJacob Faibussowitsch PetscCall(PetscCUBLASGetHandle(&cublasv2handle)); 35639566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(x->nz, &bnz)); 35649566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 35659566063dSJacob Faibussowitsch PetscCallCUBLAS(cublasXaxpy(cublasv2handle, bnz, &a, ax, one, ay, one)); 35669566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0 * bnz)); 35679566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 35689566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSERestoreArrayRead(X, &ax)); 35699566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSERestoreArray(Y, &ay)); 35709566063dSJacob Faibussowitsch PetscCall(MatSeqAIJInvalidateDiagonal(Y)); 3571039c6fbaSStefano Zampini } else { 35729566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(Y, PETSC_FALSE)); 35739566063dSJacob Faibussowitsch PetscCall(MatAXPY_SeqAIJ(Y, a, X, str)); 3574a587d139SMark } 35753ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 357695639643SRichard Tran Mills } 357795639643SRichard Tran Mills 3578d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatScale_SeqAIJCUSPARSE(Mat Y, PetscScalar a) 3579d71ae5a4SJacob Faibussowitsch { 358033c9ba73SStefano Zampini Mat_SeqAIJ *y = (Mat_SeqAIJ *)Y->data; 358133c9ba73SStefano Zampini PetscScalar *ay; 358233c9ba73SStefano Zampini cublasHandle_t cublasv2handle; 358333c9ba73SStefano Zampini PetscBLASInt one = 1, bnz = 1; 358433c9ba73SStefano Zampini 358533c9ba73SStefano Zampini PetscFunctionBegin; 35869566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEGetArray(Y, &ay)); 35879566063dSJacob Faibussowitsch PetscCall(PetscCUBLASGetHandle(&cublasv2handle)); 35889566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(y->nz, &bnz)); 35899566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 35909566063dSJacob Faibussowitsch PetscCallCUBLAS(cublasXscal(cublasv2handle, bnz, &a, ay, one)); 35919566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(bnz)); 35929566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 35939566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSERestoreArray(Y, &ay)); 35949566063dSJacob Faibussowitsch PetscCall(MatSeqAIJInvalidateDiagonal(Y)); 35953ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 359633c9ba73SStefano Zampini } 359733c9ba73SStefano Zampini 3598d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatZeroEntries_SeqAIJCUSPARSE(Mat A) 3599d71ae5a4SJacob Faibussowitsch { 36007e8381f9SStefano Zampini PetscBool both = PETSC_FALSE; 3601a587d139SMark Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 36027e8381f9SStefano Zampini 36033fa6b06aSMark Adams PetscFunctionBegin; 36043fa6b06aSMark Adams if (A->factortype == MAT_FACTOR_NONE) { 36053fa6b06aSMark Adams Mat_SeqAIJCUSPARSE *spptr = (Mat_SeqAIJCUSPARSE *)A->spptr; 36067e8381f9SStefano Zampini if (spptr->mat) { 36077e8381f9SStefano Zampini CsrMatrix *matrix = (CsrMatrix *)spptr->mat->mat; 36087e8381f9SStefano Zampini if (matrix->values) { 36097e8381f9SStefano Zampini both = PETSC_TRUE; 36107e8381f9SStefano Zampini thrust::fill(thrust::device, matrix->values->begin(), matrix->values->end(), 0.); 36117e8381f9SStefano Zampini } 36127e8381f9SStefano Zampini } 36137e8381f9SStefano Zampini if (spptr->matTranspose) { 36147e8381f9SStefano Zampini CsrMatrix *matrix = (CsrMatrix *)spptr->matTranspose->mat; 3615ad540459SPierre Jolivet if (matrix->values) thrust::fill(thrust::device, matrix->values->begin(), matrix->values->end(), 0.); 36167e8381f9SStefano Zampini } 36173fa6b06aSMark Adams } 36189566063dSJacob Faibussowitsch PetscCall(PetscArrayzero(a->a, a->i[A->rmap->n])); 36199566063dSJacob Faibussowitsch PetscCall(MatSeqAIJInvalidateDiagonal(A)); 36207e8381f9SStefano Zampini if (both) A->offloadmask = PETSC_OFFLOAD_BOTH; 3621a587d139SMark else A->offloadmask = PETSC_OFFLOAD_CPU; 36223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 36233fa6b06aSMark Adams } 36243fa6b06aSMark Adams 3625d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatBindToCPU_SeqAIJCUSPARSE(Mat A, PetscBool flg) 3626d71ae5a4SJacob Faibussowitsch { 3627a587d139SMark Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 3628a587d139SMark 3629a587d139SMark PetscFunctionBegin; 36309a14fc28SStefano Zampini if (A->factortype != MAT_FACTOR_NONE) { 36319a14fc28SStefano Zampini A->boundtocpu = flg; 36323ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 36339a14fc28SStefano Zampini } 3634a587d139SMark if (flg) { 36359566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyFromGPU(A)); 3636a587d139SMark 363733c9ba73SStefano Zampini A->ops->scale = MatScale_SeqAIJ; 3638a587d139SMark A->ops->axpy = MatAXPY_SeqAIJ; 3639a587d139SMark A->ops->zeroentries = MatZeroEntries_SeqAIJ; 3640a587d139SMark A->ops->mult = MatMult_SeqAIJ; 3641a587d139SMark A->ops->multadd = MatMultAdd_SeqAIJ; 3642a587d139SMark A->ops->multtranspose = MatMultTranspose_SeqAIJ; 3643a587d139SMark A->ops->multtransposeadd = MatMultTransposeAdd_SeqAIJ; 3644a587d139SMark A->ops->multhermitiantranspose = NULL; 3645a587d139SMark A->ops->multhermitiantransposeadd = NULL; 3646fcdce8c4SStefano Zampini A->ops->productsetfromoptions = MatProductSetFromOptions_SeqAIJ; 36479566063dSJacob Faibussowitsch PetscCall(PetscMemzero(a->ops, sizeof(Mat_SeqAIJOps))); 36489566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSeqAIJCopySubArray_C", NULL)); 36499566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C", NULL)); 36509566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_seqaijcusparse_seqdense_C", NULL)); 36519566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetPreallocationCOO_C", NULL)); 36529566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetValuesCOO_C", NULL)); 36539566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C", NULL)); 3654a587d139SMark } else { 365533c9ba73SStefano Zampini A->ops->scale = MatScale_SeqAIJCUSPARSE; 3656a587d139SMark A->ops->axpy = MatAXPY_SeqAIJCUSPARSE; 3657a587d139SMark A->ops->zeroentries = MatZeroEntries_SeqAIJCUSPARSE; 3658a587d139SMark A->ops->mult = MatMult_SeqAIJCUSPARSE; 3659a587d139SMark A->ops->multadd = MatMultAdd_SeqAIJCUSPARSE; 3660a587d139SMark A->ops->multtranspose = MatMultTranspose_SeqAIJCUSPARSE; 3661a587d139SMark A->ops->multtransposeadd = MatMultTransposeAdd_SeqAIJCUSPARSE; 3662a587d139SMark A->ops->multhermitiantranspose = MatMultHermitianTranspose_SeqAIJCUSPARSE; 3663a587d139SMark A->ops->multhermitiantransposeadd = MatMultHermitianTransposeAdd_SeqAIJCUSPARSE; 3664fcdce8c4SStefano Zampini A->ops->productsetfromoptions = MatProductSetFromOptions_SeqAIJCUSPARSE; 366567a45760SJunchao Zhang a->ops->getarray = MatSeqAIJGetArray_SeqAIJCUSPARSE; 366667a45760SJunchao Zhang a->ops->restorearray = MatSeqAIJRestoreArray_SeqAIJCUSPARSE; 366767a45760SJunchao Zhang a->ops->getarrayread = MatSeqAIJGetArrayRead_SeqAIJCUSPARSE; 366867a45760SJunchao Zhang a->ops->restorearrayread = MatSeqAIJRestoreArrayRead_SeqAIJCUSPARSE; 366967a45760SJunchao Zhang a->ops->getarraywrite = MatSeqAIJGetArrayWrite_SeqAIJCUSPARSE; 367067a45760SJunchao Zhang a->ops->restorearraywrite = MatSeqAIJRestoreArrayWrite_SeqAIJCUSPARSE; 36717ee59b9bSJunchao Zhang a->ops->getcsrandmemtype = MatSeqAIJGetCSRAndMemType_SeqAIJCUSPARSE; 36727ee59b9bSJunchao Zhang 36739566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSeqAIJCopySubArray_C", MatSeqAIJCopySubArray_SeqAIJCUSPARSE)); 36749566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C", MatProductSetFromOptions_SeqAIJCUSPARSE)); 36759566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_seqaijcusparse_seqdense_C", MatProductSetFromOptions_SeqAIJCUSPARSE)); 36769566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetPreallocationCOO_C", MatSetPreallocationCOO_SeqAIJCUSPARSE)); 36779566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetValuesCOO_C", MatSetValuesCOO_SeqAIJCUSPARSE)); 36789566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C", MatProductSetFromOptions_SeqAIJCUSPARSE)); 3679a587d139SMark } 3680a587d139SMark A->boundtocpu = flg; 3681ea500dcfSRichard Tran Mills if (flg && a->inode.size) { 3682ea500dcfSRichard Tran Mills a->inode.use = PETSC_TRUE; 3683ea500dcfSRichard Tran Mills } else { 3684ea500dcfSRichard Tran Mills a->inode.use = PETSC_FALSE; 3685ea500dcfSRichard Tran Mills } 36863ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3687a587d139SMark } 3688a587d139SMark 36898eb1d50fSPierre Jolivet PETSC_INTERN PetscErrorCode MatConvert_SeqAIJ_SeqAIJCUSPARSE(Mat A, MatType, MatReuse reuse, Mat *newmat) 3690d71ae5a4SJacob Faibussowitsch { 369149735bf3SStefano Zampini Mat B; 36929ae82921SPaul Mullowney 36939ae82921SPaul Mullowney PetscFunctionBegin; 36949566063dSJacob Faibussowitsch PetscCall(PetscDeviceInitialize(PETSC_DEVICE_CUDA)); /* first use of CUSPARSE may be via MatConvert */ 369549735bf3SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 36969566063dSJacob Faibussowitsch PetscCall(MatDuplicate(A, MAT_COPY_VALUES, newmat)); 369749735bf3SStefano Zampini } else if (reuse == MAT_REUSE_MATRIX) { 36989566063dSJacob Faibussowitsch PetscCall(MatCopy(A, *newmat, SAME_NONZERO_PATTERN)); 369949735bf3SStefano Zampini } 370049735bf3SStefano Zampini B = *newmat; 370149735bf3SStefano Zampini 37029566063dSJacob Faibussowitsch PetscCall(PetscFree(B->defaultvectype)); 37039566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(VECCUDA, &B->defaultvectype)); 370434136279SStefano Zampini 370549735bf3SStefano Zampini if (reuse != MAT_REUSE_MATRIX && !B->spptr) { 37069ae82921SPaul Mullowney if (B->factortype == MAT_FACTOR_NONE) { 3707e6e9a74fSStefano Zampini Mat_SeqAIJCUSPARSE *spptr; 37089566063dSJacob Faibussowitsch PetscCall(PetscNew(&spptr)); 37099566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreate(&spptr->handle)); 37109566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetStream(spptr->handle, PetscDefaultCudaStream)); 37111a2c6b5cSJunchao Zhang spptr->format = MAT_CUSPARSE_CSR; 3712d8132acaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 3713ba986b86SSatish Balay #if CUSPARSE_VERSION > 11301 3714a435da06SStefano Zampini spptr->spmvAlg = CUSPARSE_SPMV_CSR_ALG1; /* default, since we only support csr */ 3715a435da06SStefano Zampini #else 3716d8132acaSStefano Zampini spptr->spmvAlg = CUSPARSE_CSRMV_ALG1; /* default, since we only support csr */ 3717a435da06SStefano Zampini #endif 3718d8132acaSStefano Zampini spptr->spmmAlg = CUSPARSE_SPMM_CSR_ALG1; /* default, only support column-major dense matrix B */ 3719d8132acaSStefano Zampini spptr->csr2cscAlg = CUSPARSE_CSR2CSC_ALG1; 3720d8132acaSStefano Zampini #endif 37211a2c6b5cSJunchao Zhang B->spptr = spptr; 37229ae82921SPaul Mullowney } else { 3723e6e9a74fSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *spptr; 3724e6e9a74fSStefano Zampini 37259566063dSJacob Faibussowitsch PetscCall(PetscNew(&spptr)); 37269566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreate(&spptr->handle)); 37279566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetStream(spptr->handle, PetscDefaultCudaStream)); 3728e6e9a74fSStefano Zampini B->spptr = spptr; 37299ae82921SPaul Mullowney } 3730e6e9a74fSStefano Zampini B->offloadmask = PETSC_OFFLOAD_UNALLOCATED; 373149735bf3SStefano Zampini } 3732693b0035SStefano Zampini B->ops->assemblyend = MatAssemblyEnd_SeqAIJCUSPARSE; 37339ae82921SPaul Mullowney B->ops->destroy = MatDestroy_SeqAIJCUSPARSE; 37341a2c6b5cSJunchao Zhang B->ops->setoption = MatSetOption_SeqAIJCUSPARSE; 37359ae82921SPaul Mullowney B->ops->setfromoptions = MatSetFromOptions_SeqAIJCUSPARSE; 373695639643SRichard Tran Mills B->ops->bindtocpu = MatBindToCPU_SeqAIJCUSPARSE; 3737693b0035SStefano Zampini B->ops->duplicate = MatDuplicate_SeqAIJCUSPARSE; 37382205254eSKarl Rupp 37399566063dSJacob Faibussowitsch PetscCall(MatBindToCPU_SeqAIJCUSPARSE(B, PETSC_FALSE)); 37409566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)B, MATSEQAIJCUSPARSE)); 37419566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatCUSPARSESetFormat_C", MatCUSPARSESetFormat_SeqAIJCUSPARSE)); 3742ae48a8d0SStefano Zampini #if defined(PETSC_HAVE_HYPRE) 37439566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatConvert_seqaijcusparse_hypre_C", MatConvert_AIJ_HYPRE)); 3744ae48a8d0SStefano Zampini #endif 37459566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatCUSPARSESetUseCPUSolve_C", MatCUSPARSESetUseCPUSolve_SeqAIJCUSPARSE)); 37463ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 37479ae82921SPaul Mullowney } 37489ae82921SPaul Mullowney 3749d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MatCreate_SeqAIJCUSPARSE(Mat B) 3750d71ae5a4SJacob Faibussowitsch { 375102fe1965SBarry Smith PetscFunctionBegin; 37529566063dSJacob Faibussowitsch PetscCall(MatCreate_SeqAIJ(B)); 37539566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqAIJ_SeqAIJCUSPARSE(B, MATSEQAIJCUSPARSE, MAT_INPLACE_MATRIX, &B)); 37543ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 375502fe1965SBarry Smith } 375602fe1965SBarry Smith 37573ca39a21SBarry Smith /*MC 3758e057df02SPaul Mullowney MATSEQAIJCUSPARSE - MATAIJCUSPARSE = "(seq)aijcusparse" - A matrix type to be used for sparse matrices. 3759e057df02SPaul Mullowney 376011a5261eSBarry Smith A matrix type type whose data resides on NVIDIA GPUs. These matrices can be in either 376111a5261eSBarry Smith CSR, ELL, or Hybrid format. 376211a5261eSBarry Smith All matrix calculations are performed on NVIDIA GPUs using the CuSPARSE library. 3763e057df02SPaul Mullowney 3764e057df02SPaul Mullowney Options Database Keys: 376511a5261eSBarry Smith + -mat_type aijcusparse - sets the matrix type to "seqaijcusparse" during a call to `MatSetFromOptions()` 37662ef1f0ffSBarry Smith . -mat_cusparse_storage_format csr - sets the storage format of matrices (for `MatMult()` and factors in `MatSolve()`). 37672ef1f0ffSBarry Smith Other options include ell (ellpack) or hyb (hybrid). 37682ef1f0ffSBarry Smith . -mat_cusparse_mult_storage_format csr - sets the storage format of matrices (for `MatMult()`). Other options include ell (ellpack) or hyb (hybrid). 37692ef1f0ffSBarry Smith - -mat_cusparse_use_cpu_solve - Do `MatSolve()` on CPU 3770e057df02SPaul Mullowney 3771e057df02SPaul Mullowney Level: beginner 3772e057df02SPaul Mullowney 37732ef1f0ffSBarry Smith .seealso: [](chapter_matrices), `Mat`, `MatCreateSeqAIJCUSPARSE()`, `MatCUSPARSESetUseCPUSolve()`, `MATAIJCUSPARSE`, `MatCreateAIJCUSPARSE()`, `MatCUSPARSESetFormat()`, `MatCUSPARSEStorageFormat`, `MatCUSPARSEFormatOperation` 3774e057df02SPaul Mullowney M*/ 37757f756511SDominic Meiser 3776bddcd29dSMark Adams PETSC_EXTERN PetscErrorCode MatGetFactor_seqaijcusparse_cusparse_band(Mat, MatFactorType, Mat *); 37770f39cd5aSBarry Smith 3778d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_CUSPARSE(void) 3779d71ae5a4SJacob Faibussowitsch { 378042c9c57cSBarry Smith PetscFunctionBegin; 37819566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERCUSPARSEBAND, MATSEQAIJ, MAT_FACTOR_LU, MatGetFactor_seqaijcusparse_cusparse_band)); 37829566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERCUSPARSE, MATSEQAIJCUSPARSE, MAT_FACTOR_LU, MatGetFactor_seqaijcusparse_cusparse)); 37839566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERCUSPARSE, MATSEQAIJCUSPARSE, MAT_FACTOR_CHOLESKY, MatGetFactor_seqaijcusparse_cusparse)); 37849566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERCUSPARSE, MATSEQAIJCUSPARSE, MAT_FACTOR_ILU, MatGetFactor_seqaijcusparse_cusparse)); 37859566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERCUSPARSE, MATSEQAIJCUSPARSE, MAT_FACTOR_ICC, MatGetFactor_seqaijcusparse_cusparse)); 3786bddcd29dSMark Adams 37873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 378842c9c57cSBarry Smith } 378929b38603SBarry Smith 3790d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatResetPreallocationCOO_SeqAIJCUSPARSE(Mat mat) 3791d71ae5a4SJacob Faibussowitsch { 3792cbc6b225SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE *)mat->spptr; 3793cbc6b225SStefano Zampini 3794cbc6b225SStefano Zampini PetscFunctionBegin; 37953ba16761SJacob Faibussowitsch if (!cusp) PetscFunctionReturn(PETSC_SUCCESS); 3796cbc6b225SStefano Zampini delete cusp->cooPerm; 3797cbc6b225SStefano Zampini delete cusp->cooPerm_a; 3798cbc6b225SStefano Zampini cusp->cooPerm = NULL; 3799cbc6b225SStefano Zampini cusp->cooPerm_a = NULL; 3800cbc6b225SStefano Zampini if (cusp->use_extended_coo) { 38019566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(cusp->jmap_d)); 38029566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(cusp->perm_d)); 3803cbc6b225SStefano Zampini } 3804cbc6b225SStefano Zampini cusp->use_extended_coo = PETSC_FALSE; 38053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3806cbc6b225SStefano Zampini } 3807cbc6b225SStefano Zampini 3808d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJCUSPARSE_Destroy(Mat_SeqAIJCUSPARSE **cusparsestruct) 3809d71ae5a4SJacob Faibussowitsch { 38107f756511SDominic Meiser PetscFunctionBegin; 38117f756511SDominic Meiser if (*cusparsestruct) { 38129566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEMultStruct_Destroy(&(*cusparsestruct)->mat, (*cusparsestruct)->format)); 38139566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEMultStruct_Destroy(&(*cusparsestruct)->matTranspose, (*cusparsestruct)->format)); 38147f756511SDominic Meiser delete (*cusparsestruct)->workVector; 381581902715SJunchao Zhang delete (*cusparsestruct)->rowoffsets_gpu; 38167e8381f9SStefano Zampini delete (*cusparsestruct)->cooPerm; 38177e8381f9SStefano Zampini delete (*cusparsestruct)->cooPerm_a; 3818a49f1ed0SStefano Zampini delete (*cusparsestruct)->csr2csc_i; 38199566063dSJacob Faibussowitsch if ((*cusparsestruct)->handle) PetscCallCUSPARSE(cusparseDestroy((*cusparsestruct)->handle)); 38209566063dSJacob Faibussowitsch if ((*cusparsestruct)->jmap_d) PetscCallCUDA(cudaFree((*cusparsestruct)->jmap_d)); 38219566063dSJacob Faibussowitsch if ((*cusparsestruct)->perm_d) PetscCallCUDA(cudaFree((*cusparsestruct)->perm_d)); 38229566063dSJacob Faibussowitsch PetscCall(PetscFree(*cusparsestruct)); 38237f756511SDominic Meiser } 38243ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 38257f756511SDominic Meiser } 38267f756511SDominic Meiser 3827d71ae5a4SJacob Faibussowitsch static PetscErrorCode CsrMatrix_Destroy(CsrMatrix **mat) 3828d71ae5a4SJacob Faibussowitsch { 38297f756511SDominic Meiser PetscFunctionBegin; 38307f756511SDominic Meiser if (*mat) { 38317f756511SDominic Meiser delete (*mat)->values; 38327f756511SDominic Meiser delete (*mat)->column_indices; 38337f756511SDominic Meiser delete (*mat)->row_offsets; 38347f756511SDominic Meiser delete *mat; 38357f756511SDominic Meiser *mat = 0; 38367f756511SDominic Meiser } 38373ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 38387f756511SDominic Meiser } 38397f756511SDominic Meiser 3840d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSETriFactorStruct **trifactor) 3841d71ae5a4SJacob Faibussowitsch { 38427f756511SDominic Meiser PetscFunctionBegin; 38437f756511SDominic Meiser if (*trifactor) { 38449566063dSJacob Faibussowitsch if ((*trifactor)->descr) PetscCallCUSPARSE(cusparseDestroyMatDescr((*trifactor)->descr)); 3845261a78b4SJunchao Zhang if ((*trifactor)->solveInfo) PetscCallCUSPARSE(cusparseDestroyCsrsvInfo((*trifactor)->solveInfo)); 38469566063dSJacob Faibussowitsch PetscCall(CsrMatrix_Destroy(&(*trifactor)->csrMat)); 38479566063dSJacob Faibussowitsch if ((*trifactor)->solveBuffer) PetscCallCUDA(cudaFree((*trifactor)->solveBuffer)); 38489566063dSJacob Faibussowitsch if ((*trifactor)->AA_h) PetscCallCUDA(cudaFreeHost((*trifactor)->AA_h)); 3849afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 38509566063dSJacob Faibussowitsch if ((*trifactor)->csr2cscBuffer) PetscCallCUDA(cudaFree((*trifactor)->csr2cscBuffer)); 3851afb2bd1cSJunchao Zhang #endif 38529566063dSJacob Faibussowitsch PetscCall(PetscFree(*trifactor)); 38537f756511SDominic Meiser } 38543ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 38557f756511SDominic Meiser } 38567f756511SDominic Meiser 3857d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSEMultStruct **matstruct, MatCUSPARSEStorageFormat format) 3858d71ae5a4SJacob Faibussowitsch { 38597f756511SDominic Meiser CsrMatrix *mat; 38607f756511SDominic Meiser 38617f756511SDominic Meiser PetscFunctionBegin; 38627f756511SDominic Meiser if (*matstruct) { 38637f756511SDominic Meiser if ((*matstruct)->mat) { 38647f756511SDominic Meiser if (format == MAT_CUSPARSE_ELL || format == MAT_CUSPARSE_HYB) { 3865afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 3866afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 3867afb2bd1cSJunchao Zhang #else 38687f756511SDominic Meiser cusparseHybMat_t hybMat = (cusparseHybMat_t)(*matstruct)->mat; 38699566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseDestroyHybMat(hybMat)); 3870afb2bd1cSJunchao Zhang #endif 38717f756511SDominic Meiser } else { 38727f756511SDominic Meiser mat = (CsrMatrix *)(*matstruct)->mat; 38733ba16761SJacob Faibussowitsch PetscCall(CsrMatrix_Destroy(&mat)); 38747f756511SDominic Meiser } 38757f756511SDominic Meiser } 38769566063dSJacob Faibussowitsch if ((*matstruct)->descr) PetscCallCUSPARSE(cusparseDestroyMatDescr((*matstruct)->descr)); 38777f756511SDominic Meiser delete (*matstruct)->cprowIndices; 38789566063dSJacob Faibussowitsch if ((*matstruct)->alpha_one) PetscCallCUDA(cudaFree((*matstruct)->alpha_one)); 38799566063dSJacob Faibussowitsch if ((*matstruct)->beta_zero) PetscCallCUDA(cudaFree((*matstruct)->beta_zero)); 38809566063dSJacob Faibussowitsch if ((*matstruct)->beta_one) PetscCallCUDA(cudaFree((*matstruct)->beta_one)); 3881afb2bd1cSJunchao Zhang 3882afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 3883afb2bd1cSJunchao Zhang Mat_SeqAIJCUSPARSEMultStruct *mdata = *matstruct; 38849566063dSJacob Faibussowitsch if (mdata->matDescr) PetscCallCUSPARSE(cusparseDestroySpMat(mdata->matDescr)); 3885afb2bd1cSJunchao Zhang for (int i = 0; i < 3; i++) { 3886afb2bd1cSJunchao Zhang if (mdata->cuSpMV[i].initialized) { 38879566063dSJacob Faibussowitsch PetscCallCUDA(cudaFree(mdata->cuSpMV[i].spmvBuffer)); 38889566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseDestroyDnVec(mdata->cuSpMV[i].vecXDescr)); 38899566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseDestroyDnVec(mdata->cuSpMV[i].vecYDescr)); 3890afb2bd1cSJunchao Zhang } 3891afb2bd1cSJunchao Zhang } 3892afb2bd1cSJunchao Zhang #endif 38937f756511SDominic Meiser delete *matstruct; 38947e8381f9SStefano Zampini *matstruct = NULL; 38957f756511SDominic Meiser } 38963ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 38977f756511SDominic Meiser } 38987f756511SDominic Meiser 3899d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJCUSPARSETriFactors_Reset(Mat_SeqAIJCUSPARSETriFactors_p *trifactors) 3900d71ae5a4SJacob Faibussowitsch { 3901da112707SJunchao Zhang Mat_SeqAIJCUSPARSETriFactors *fs = *trifactors; 3902da112707SJunchao Zhang 39037f756511SDominic Meiser PetscFunctionBegin; 3904da112707SJunchao Zhang if (fs) { 3905da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSEMultStruct_Destroy(&fs->loTriFactorPtr)); 3906da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSEMultStruct_Destroy(&fs->upTriFactorPtr)); 3907da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSEMultStruct_Destroy(&fs->loTriFactorPtrTranspose)); 3908da112707SJunchao Zhang PetscCall(MatSeqAIJCUSPARSEMultStruct_Destroy(&fs->upTriFactorPtrTranspose)); 3909da112707SJunchao Zhang delete fs->rpermIndices; 3910da112707SJunchao Zhang delete fs->cpermIndices; 3911da112707SJunchao Zhang delete fs->workVector; 3912da112707SJunchao Zhang fs->rpermIndices = NULL; 3913da112707SJunchao Zhang fs->cpermIndices = NULL; 3914da112707SJunchao Zhang fs->workVector = NULL; 3915da112707SJunchao Zhang if (fs->a_band_d) PetscCallCUDA(cudaFree(fs->a_band_d)); 3916da112707SJunchao Zhang if (fs->i_band_d) PetscCallCUDA(cudaFree(fs->i_band_d)); 3917da112707SJunchao Zhang fs->init_dev_prop = PETSC_FALSE; 3918da112707SJunchao Zhang #if CUSPARSE_VERSION >= 11500 3919da112707SJunchao Zhang PetscCallCUDA(cudaFree(fs->csrRowPtr)); 3920da112707SJunchao Zhang PetscCallCUDA(cudaFree(fs->csrColIdx)); 3921da112707SJunchao Zhang PetscCallCUDA(cudaFree(fs->csrVal)); 3922da112707SJunchao Zhang PetscCallCUDA(cudaFree(fs->X)); 3923da112707SJunchao Zhang PetscCallCUDA(cudaFree(fs->Y)); 392412ba2bc6SJunchao Zhang // PetscCallCUDA(cudaFree(fs->factBuffer_M)); /* No needed since factBuffer_M shares with one of spsvBuffer_L/U */ 3925da112707SJunchao Zhang PetscCallCUDA(cudaFree(fs->spsvBuffer_L)); 3926da112707SJunchao Zhang PetscCallCUDA(cudaFree(fs->spsvBuffer_U)); 392712ba2bc6SJunchao Zhang PetscCallCUDA(cudaFree(fs->spsvBuffer_Lt)); 3928da112707SJunchao Zhang PetscCallCUDA(cudaFree(fs->spsvBuffer_Ut)); 3929da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDestroyMatDescr(fs->matDescr_M)); 3930da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDestroySpMat(fs->spMatDescr_L)); 3931da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDestroySpMat(fs->spMatDescr_U)); 3932da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_destroyDescr(fs->spsvDescr_L)); 3933da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_destroyDescr(fs->spsvDescr_Lt)); 3934da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_destroyDescr(fs->spsvDescr_U)); 3935da112707SJunchao Zhang PetscCallCUSPARSE(cusparseSpSV_destroyDescr(fs->spsvDescr_Ut)); 3936da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDestroyDnVec(fs->dnVecDescr_X)); 3937da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDestroyDnVec(fs->dnVecDescr_Y)); 3938da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDestroyCsrilu02Info(fs->ilu0Info_M)); 3939da112707SJunchao Zhang PetscCallCUSPARSE(cusparseDestroyCsric02Info(fs->ic0Info_M)); 394012ba2bc6SJunchao Zhang 394112ba2bc6SJunchao Zhang fs->createdTransposeSpSVDescr = PETSC_FALSE; 394212ba2bc6SJunchao Zhang fs->updatedTransposeSpSVAnalysis = PETSC_FALSE; 3943da112707SJunchao Zhang #endif 3944ccdfe979SStefano Zampini } 39453ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3946ccdfe979SStefano Zampini } 3947ccdfe979SStefano Zampini 3948d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJCUSPARSETriFactors_Destroy(Mat_SeqAIJCUSPARSETriFactors **trifactors) 3949d71ae5a4SJacob Faibussowitsch { 3950ccdfe979SStefano Zampini PetscFunctionBegin; 3951ccdfe979SStefano Zampini if (*trifactors) { 39529566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSETriFactors_Reset(trifactors)); 3953f0173cd6SStefano Zampini PetscCallCUSPARSE(cusparseDestroy((*trifactors)->handle)); 39549566063dSJacob Faibussowitsch PetscCall(PetscFree(*trifactors)); 39557f756511SDominic Meiser } 39563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 39577f756511SDominic Meiser } 39587e8381f9SStefano Zampini 39599371c9d4SSatish Balay struct IJCompare { 3960d71ae5a4SJacob Faibussowitsch __host__ __device__ inline bool operator()(const thrust::tuple<PetscInt, PetscInt> &t1, const thrust::tuple<PetscInt, PetscInt> &t2) 3961d71ae5a4SJacob Faibussowitsch { 39627e8381f9SStefano Zampini if (t1.get<0>() < t2.get<0>()) return true; 39637e8381f9SStefano Zampini if (t1.get<0>() == t2.get<0>()) return t1.get<1>() < t2.get<1>(); 39647e8381f9SStefano Zampini return false; 39657e8381f9SStefano Zampini } 39667e8381f9SStefano Zampini }; 39677e8381f9SStefano Zampini 39689371c9d4SSatish Balay struct IJEqual { 3969d71ae5a4SJacob Faibussowitsch __host__ __device__ inline bool operator()(const thrust::tuple<PetscInt, PetscInt> &t1, const thrust::tuple<PetscInt, PetscInt> &t2) 3970d71ae5a4SJacob Faibussowitsch { 39717e8381f9SStefano Zampini if (t1.get<0>() != t2.get<0>() || t1.get<1>() != t2.get<1>()) return false; 39727e8381f9SStefano Zampini return true; 39737e8381f9SStefano Zampini } 39747e8381f9SStefano Zampini }; 39757e8381f9SStefano Zampini 39769371c9d4SSatish Balay struct IJDiff { 39779371c9d4SSatish Balay __host__ __device__ inline PetscInt operator()(const PetscInt &t1, const PetscInt &t2) { return t1 == t2 ? 0 : 1; } 39787e8381f9SStefano Zampini }; 39797e8381f9SStefano Zampini 39809371c9d4SSatish Balay struct IJSum { 39819371c9d4SSatish Balay __host__ __device__ inline PetscInt operator()(const PetscInt &t1, const PetscInt &t2) { return t1 || t2; } 39827e8381f9SStefano Zampini }; 39837e8381f9SStefano Zampini 39847e8381f9SStefano Zampini #include <thrust/iterator/discard_iterator.h> 3985219fbbafSJunchao Zhang /* Associated with MatSetPreallocationCOO_SeqAIJCUSPARSE_Basic() */ 3986d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSetValuesCOO_SeqAIJCUSPARSE_Basic(Mat A, const PetscScalar v[], InsertMode imode) 3987d71ae5a4SJacob Faibussowitsch { 39887e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE *)A->spptr; 3989fcdce8c4SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 3990bfcc3627SStefano Zampini THRUSTARRAY *cooPerm_v = NULL; 399108391a17SStefano Zampini thrust::device_ptr<const PetscScalar> d_v; 39927e8381f9SStefano Zampini CsrMatrix *matrix; 39937e8381f9SStefano Zampini PetscInt n; 39947e8381f9SStefano Zampini 39957e8381f9SStefano Zampini PetscFunctionBegin; 399628b400f6SJacob Faibussowitsch PetscCheck(cusp, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing CUSPARSE struct"); 399728b400f6SJacob Faibussowitsch PetscCheck(cusp->mat, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing CUSPARSE CsrMatrix"); 39987e8381f9SStefano Zampini if (!cusp->cooPerm) { 39999566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY)); 40009566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY)); 40013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 40027e8381f9SStefano Zampini } 40037e8381f9SStefano Zampini matrix = (CsrMatrix *)cusp->mat->mat; 400428b400f6SJacob Faibussowitsch PetscCheck(matrix->values, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing CUDA memory"); 4005e61fc153SStefano Zampini if (!v) { 4006e61fc153SStefano Zampini if (imode == INSERT_VALUES) thrust::fill(thrust::device, matrix->values->begin(), matrix->values->end(), 0.); 4007e61fc153SStefano Zampini goto finalize; 40087e8381f9SStefano Zampini } 4009e61fc153SStefano Zampini n = cusp->cooPerm->size(); 401008391a17SStefano Zampini if (isCudaMem(v)) { 401108391a17SStefano Zampini d_v = thrust::device_pointer_cast(v); 401208391a17SStefano Zampini } else { 4013e61fc153SStefano Zampini cooPerm_v = new THRUSTARRAY(n); 4014e61fc153SStefano Zampini cooPerm_v->assign(v, v + n); 401508391a17SStefano Zampini d_v = cooPerm_v->data(); 40169566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(n * sizeof(PetscScalar))); 401708391a17SStefano Zampini } 40189566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 4019e61fc153SStefano Zampini if (imode == ADD_VALUES) { /* ADD VALUES means add to existing ones */ 4020ddea5d60SJunchao Zhang if (cusp->cooPerm_a) { /* there are repeated entries in d_v[], and we need to add these them */ 4021bfcc3627SStefano Zampini THRUSTARRAY *cooPerm_w = new THRUSTARRAY(matrix->values->size()); 402208391a17SStefano Zampini auto vbit = thrust::make_permutation_iterator(d_v, cusp->cooPerm->begin()); 4023ddea5d60SJunchao Zhang /* thrust::reduce_by_key(keys_first,keys_last,values_first,keys_output,values_output) 4024ddea5d60SJunchao Zhang cooPerm_a = [0,0,1,2,3,4]. The length is n, number of nonozeros in d_v[]. 4025ddea5d60SJunchao Zhang cooPerm_a is ordered. d_v[i] is the cooPerm_a[i]-th unique nonzero. 4026ddea5d60SJunchao Zhang */ 4027e61fc153SStefano Zampini thrust::reduce_by_key(cusp->cooPerm_a->begin(), cusp->cooPerm_a->end(), vbit, thrust::make_discard_iterator(), cooPerm_w->begin(), thrust::equal_to<PetscInt>(), thrust::plus<PetscScalar>()); 4028e61fc153SStefano Zampini thrust::transform(cooPerm_w->begin(), cooPerm_w->end(), matrix->values->begin(), matrix->values->begin(), thrust::plus<PetscScalar>()); 4029e61fc153SStefano Zampini delete cooPerm_w; 40307e8381f9SStefano Zampini } else { 4031ddea5d60SJunchao Zhang /* all nonzeros in d_v[] are unique entries */ 40329371c9d4SSatish Balay auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v, cusp->cooPerm->begin()), matrix->values->begin())); 40339371c9d4SSatish Balay auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v, cusp->cooPerm->end()), matrix->values->end())); 4034ddea5d60SJunchao Zhang thrust::for_each(zibit, zieit, VecCUDAPlusEquals()); /* values[i] += d_v[cooPerm[i]] */ 40357e8381f9SStefano Zampini } 40367e8381f9SStefano Zampini } else { 4037e61fc153SStefano Zampini if (cusp->cooPerm_a) { /* repeated entries in COO, with INSERT_VALUES -> reduce */ 403808391a17SStefano Zampini auto vbit = thrust::make_permutation_iterator(d_v, cusp->cooPerm->begin()); 4039e61fc153SStefano Zampini thrust::reduce_by_key(cusp->cooPerm_a->begin(), cusp->cooPerm_a->end(), vbit, thrust::make_discard_iterator(), matrix->values->begin(), thrust::equal_to<PetscInt>(), thrust::plus<PetscScalar>()); 40407e8381f9SStefano Zampini } else { 40419371c9d4SSatish Balay auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v, cusp->cooPerm->begin()), matrix->values->begin())); 40429371c9d4SSatish Balay auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v, cusp->cooPerm->end()), matrix->values->end())); 40437e8381f9SStefano Zampini thrust::for_each(zibit, zieit, VecCUDAEquals()); 40447e8381f9SStefano Zampini } 40457e8381f9SStefano Zampini } 40469566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 4047e61fc153SStefano Zampini finalize: 4048e61fc153SStefano Zampini delete cooPerm_v; 40497e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 40509566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)A)); 4051fcdce8c4SStefano Zampini /* shorter version of MatAssemblyEnd_SeqAIJ */ 40529566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Matrix size: %" PetscInt_FMT " X %" PetscInt_FMT "; storage space: 0 unneeded,%" PetscInt_FMT " used\n", A->rmap->n, A->cmap->n, a->nz)); 40539566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Number of mallocs during MatSetValues() is 0\n")); 40549566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Maximum nonzeros in any row is %" PetscInt_FMT "\n", a->rmax)); 4055fcdce8c4SStefano Zampini a->reallocs = 0; 4056fcdce8c4SStefano Zampini A->info.mallocs += 0; 4057fcdce8c4SStefano Zampini A->info.nz_unneeded = 0; 4058fcdce8c4SStefano Zampini A->assembled = A->was_assembled = PETSC_TRUE; 4059fcdce8c4SStefano Zampini A->num_ass++; 40603ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 40617e8381f9SStefano Zampini } 40627e8381f9SStefano Zampini 4063d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJCUSPARSEInvalidateTranspose(Mat A, PetscBool destroy) 4064d71ae5a4SJacob Faibussowitsch { 4065a49f1ed0SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE *)A->spptr; 4066a49f1ed0SStefano Zampini 4067a49f1ed0SStefano Zampini PetscFunctionBegin; 4068a49f1ed0SStefano Zampini PetscCheckTypeName(A, MATSEQAIJCUSPARSE); 40693ba16761SJacob Faibussowitsch if (!cusp) PetscFunctionReturn(PETSC_SUCCESS); 4070a49f1ed0SStefano Zampini if (destroy) { 40719566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEMultStruct_Destroy(&cusp->matTranspose, cusp->format)); 4072a49f1ed0SStefano Zampini delete cusp->csr2csc_i; 4073a49f1ed0SStefano Zampini cusp->csr2csc_i = NULL; 4074a49f1ed0SStefano Zampini } 40751a2c6b5cSJunchao Zhang A->transupdated = PETSC_FALSE; 40763ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4077a49f1ed0SStefano Zampini } 4078a49f1ed0SStefano Zampini 40797e8381f9SStefano Zampini #include <thrust/binary_search.h> 4080219fbbafSJunchao Zhang /* 'Basic' means it only works when coo_i[] and coo_j[] do not contain negative indices */ 4081d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSetPreallocationCOO_SeqAIJCUSPARSE_Basic(Mat A, PetscCount n, PetscInt coo_i[], PetscInt coo_j[]) 4082d71ae5a4SJacob Faibussowitsch { 40837e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE *)A->spptr; 40847e8381f9SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 40857e8381f9SStefano Zampini PetscInt cooPerm_n, nzr = 0; 40867e8381f9SStefano Zampini 40877e8381f9SStefano Zampini PetscFunctionBegin; 40889566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 40899566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 40907e8381f9SStefano Zampini cooPerm_n = cusp->cooPerm ? cusp->cooPerm->size() : 0; 40917e8381f9SStefano Zampini if (n != cooPerm_n) { 40927e8381f9SStefano Zampini delete cusp->cooPerm; 40937e8381f9SStefano Zampini delete cusp->cooPerm_a; 40947e8381f9SStefano Zampini cusp->cooPerm = NULL; 40957e8381f9SStefano Zampini cusp->cooPerm_a = NULL; 40967e8381f9SStefano Zampini } 40977e8381f9SStefano Zampini if (n) { 4098e8729f6fSJunchao Zhang thrust::device_ptr<PetscInt> d_i, d_j; 4099e8729f6fSJunchao Zhang PetscInt *d_raw_i, *d_raw_j; 4100e8729f6fSJunchao Zhang PetscBool free_raw_i = PETSC_FALSE, free_raw_j = PETSC_FALSE; 4101e8729f6fSJunchao Zhang PetscMemType imtype, jmtype; 4102e8729f6fSJunchao Zhang 4103e8729f6fSJunchao Zhang PetscCall(PetscGetMemType(coo_i, &imtype)); 4104e8729f6fSJunchao Zhang if (PetscMemTypeHost(imtype)) { 4105e8729f6fSJunchao Zhang PetscCallCUDA(cudaMalloc(&d_raw_i, sizeof(PetscInt) * n)); 4106e8729f6fSJunchao Zhang PetscCallCUDA(cudaMemcpy(d_raw_i, coo_i, sizeof(PetscInt) * n, cudaMemcpyHostToDevice)); 4107e8729f6fSJunchao Zhang d_i = thrust::device_pointer_cast(d_raw_i); 4108e8729f6fSJunchao Zhang free_raw_i = PETSC_TRUE; 4109e8729f6fSJunchao Zhang PetscCall(PetscLogCpuToGpu(1. * n * sizeof(PetscInt))); 4110e8729f6fSJunchao Zhang } else { 4111e8729f6fSJunchao Zhang d_i = thrust::device_pointer_cast(coo_i); 4112e8729f6fSJunchao Zhang } 4113e8729f6fSJunchao Zhang 4114e8729f6fSJunchao Zhang PetscCall(PetscGetMemType(coo_j, &jmtype)); 4115e8729f6fSJunchao Zhang if (PetscMemTypeHost(jmtype)) { // MatSetPreallocationCOO_MPIAIJCUSPARSE_Basic() passes device coo_i[] and host coo_j[]! 4116e8729f6fSJunchao Zhang PetscCallCUDA(cudaMalloc(&d_raw_j, sizeof(PetscInt) * n)); 4117e8729f6fSJunchao Zhang PetscCallCUDA(cudaMemcpy(d_raw_j, coo_j, sizeof(PetscInt) * n, cudaMemcpyHostToDevice)); 4118e8729f6fSJunchao Zhang d_j = thrust::device_pointer_cast(d_raw_j); 4119e8729f6fSJunchao Zhang free_raw_j = PETSC_TRUE; 4120e8729f6fSJunchao Zhang PetscCall(PetscLogCpuToGpu(1. * n * sizeof(PetscInt))); 4121e8729f6fSJunchao Zhang } else { 4122e8729f6fSJunchao Zhang d_j = thrust::device_pointer_cast(coo_j); 4123e8729f6fSJunchao Zhang } 4124e8729f6fSJunchao Zhang 41257e8381f9SStefano Zampini THRUSTINTARRAY ii(A->rmap->n); 41267e8381f9SStefano Zampini 4127ad540459SPierre Jolivet if (!cusp->cooPerm) cusp->cooPerm = new THRUSTINTARRAY(n); 4128ad540459SPierre Jolivet if (!cusp->cooPerm_a) cusp->cooPerm_a = new THRUSTINTARRAY(n); 41297e8381f9SStefano Zampini 4130ddea5d60SJunchao Zhang /* Ex. 4131ddea5d60SJunchao Zhang n = 6 4132ddea5d60SJunchao Zhang coo_i = [3,3,1,4,1,4] 4133ddea5d60SJunchao Zhang coo_j = [3,2,2,5,2,6] 4134ddea5d60SJunchao Zhang */ 4135e8729f6fSJunchao Zhang auto fkey = thrust::make_zip_iterator(thrust::make_tuple(d_i, d_j)); 4136e8729f6fSJunchao Zhang auto ekey = thrust::make_zip_iterator(thrust::make_tuple(d_i + n, d_j + n)); 41377e8381f9SStefano Zampini 41389566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 41397e8381f9SStefano Zampini thrust::sequence(thrust::device, cusp->cooPerm->begin(), cusp->cooPerm->end(), 0); 4140ddea5d60SJunchao Zhang thrust::sort_by_key(fkey, ekey, cusp->cooPerm->begin(), IJCompare()); /* sort by row, then by col */ 4141e8729f6fSJunchao Zhang (*cusp->cooPerm_a).assign(d_i, d_i + n); /* copy the sorted array */ 4142e8729f6fSJunchao Zhang THRUSTINTARRAY w(d_j, d_j + n); 41437e8381f9SStefano Zampini 4144ddea5d60SJunchao Zhang /* 4145ddea5d60SJunchao Zhang d_i = [1,1,3,3,4,4] 4146ddea5d60SJunchao Zhang d_j = [2,2,2,3,5,6] 4147ddea5d60SJunchao Zhang cooPerm = [2,4,1,0,3,5] 4148ddea5d60SJunchao Zhang */ 4149ddea5d60SJunchao Zhang auto nekey = thrust::unique(fkey, ekey, IJEqual()); /* unique (d_i, d_j) */ 4150ddea5d60SJunchao Zhang 4151ddea5d60SJunchao Zhang /* 4152ddea5d60SJunchao Zhang d_i = [1,3,3,4,4,x] 4153ddea5d60SJunchao Zhang ^ekey 4154ddea5d60SJunchao Zhang d_j = [2,2,3,5,6,x] 4155ddea5d60SJunchao Zhang ^nekye 4156ddea5d60SJunchao Zhang */ 41577e8381f9SStefano Zampini if (nekey == ekey) { /* all entries are unique */ 41587e8381f9SStefano Zampini delete cusp->cooPerm_a; 41597e8381f9SStefano Zampini cusp->cooPerm_a = NULL; 4160ddea5d60SJunchao Zhang } else { /* Stefano: I couldn't come up with a more elegant algorithm */ 4161ddea5d60SJunchao Zhang /* idea: any change in i or j in the (i,j) sequence implies a new nonzero */ 4162ddea5d60SJunchao Zhang adjacent_difference(cusp->cooPerm_a->begin(), cusp->cooPerm_a->end(), cusp->cooPerm_a->begin(), IJDiff()); /* cooPerm_a: [1,1,3,3,4,4] => [1,0,1,0,1,0]*/ 4163ddea5d60SJunchao Zhang adjacent_difference(w.begin(), w.end(), w.begin(), IJDiff()); /* w: [2,2,2,3,5,6] => [2,0,0,1,1,1]*/ 4164ddea5d60SJunchao Zhang (*cusp->cooPerm_a)[0] = 0; /* clear the first entry, though accessing an entry on device implies a cudaMemcpy */ 41657e8381f9SStefano Zampini w[0] = 0; 4166ddea5d60SJunchao Zhang thrust::transform(cusp->cooPerm_a->begin(), cusp->cooPerm_a->end(), w.begin(), cusp->cooPerm_a->begin(), IJSum()); /* cooPerm_a = [0,0,1,1,1,1]*/ 4167ddea5d60SJunchao Zhang thrust::inclusive_scan(cusp->cooPerm_a->begin(), cusp->cooPerm_a->end(), cusp->cooPerm_a->begin(), thrust::plus<PetscInt>()); /*cooPerm_a=[0,0,1,2,3,4]*/ 41687e8381f9SStefano Zampini } 41697e8381f9SStefano Zampini thrust::counting_iterator<PetscInt> search_begin(0); 4170e8729f6fSJunchao Zhang thrust::upper_bound(d_i, nekey.get_iterator_tuple().get<0>(), /* binary search entries of [0,1,2,3,4,5,6) in ordered array d_i = [1,3,3,4,4], supposing A->rmap->n = 6. */ 4171ddea5d60SJunchao Zhang search_begin, search_begin + A->rmap->n, /* return in ii[] the index of last position in d_i[] where value could be inserted without violating the ordering */ 4172ddea5d60SJunchao Zhang ii.begin()); /* ii = [0,1,1,3,5,5]. A leading 0 will be added later */ 41739566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 41747e8381f9SStefano Zampini 41759566063dSJacob Faibussowitsch PetscCall(MatSeqXAIJFreeAIJ(A, &a->a, &a->j, &a->i)); 41767e8381f9SStefano Zampini a->singlemalloc = PETSC_FALSE; 41777e8381f9SStefano Zampini a->free_a = PETSC_TRUE; 41787e8381f9SStefano Zampini a->free_ij = PETSC_TRUE; 41799566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(A->rmap->n + 1, &a->i)); 4180ddea5d60SJunchao Zhang a->i[0] = 0; /* a->i = [0,0,1,1,3,5,5] */ 41819566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(a->i + 1, ii.data().get(), A->rmap->n * sizeof(PetscInt), cudaMemcpyDeviceToHost)); 41827e8381f9SStefano Zampini a->nz = a->maxnz = a->i[A->rmap->n]; 4183fcdce8c4SStefano Zampini a->rmax = 0; 41849566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(a->nz, &a->a)); 41859566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(a->nz, &a->j)); 4186e8729f6fSJunchao Zhang PetscCallCUDA(cudaMemcpy(a->j, thrust::raw_pointer_cast(d_j), a->nz * sizeof(PetscInt), cudaMemcpyDeviceToHost)); 41879566063dSJacob Faibussowitsch if (!a->ilen) PetscCall(PetscMalloc1(A->rmap->n, &a->ilen)); 41889566063dSJacob Faibussowitsch if (!a->imax) PetscCall(PetscMalloc1(A->rmap->n, &a->imax)); 41897e8381f9SStefano Zampini for (PetscInt i = 0; i < A->rmap->n; i++) { 41907e8381f9SStefano Zampini const PetscInt nnzr = a->i[i + 1] - a->i[i]; 41917e8381f9SStefano Zampini nzr += (PetscInt) !!(nnzr); 41927e8381f9SStefano Zampini a->ilen[i] = a->imax[i] = nnzr; 4193fcdce8c4SStefano Zampini a->rmax = PetscMax(a->rmax, nnzr); 41947e8381f9SStefano Zampini } 4195fcdce8c4SStefano Zampini a->nonzerorowcnt = nzr; 41967e8381f9SStefano Zampini A->preallocated = PETSC_TRUE; 41979566063dSJacob Faibussowitsch PetscCall(PetscLogGpuToCpu((A->rmap->n + a->nz) * sizeof(PetscInt))); 41989566063dSJacob Faibussowitsch PetscCall(MatMarkDiagonal_SeqAIJ(A)); 4199e8729f6fSJunchao Zhang if (free_raw_i) PetscCallCUDA(cudaFree(d_raw_i)); 4200e8729f6fSJunchao Zhang if (free_raw_j) PetscCallCUDA(cudaFree(d_raw_j)); 42017e8381f9SStefano Zampini } else { 42029566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation(A, 0, NULL)); 42037e8381f9SStefano Zampini } 42049566063dSJacob Faibussowitsch PetscCall(MatSetOption(A, MAT_NEW_NONZERO_ALLOCATION_ERR, PETSC_TRUE)); 42057e8381f9SStefano Zampini 42067e8381f9SStefano Zampini /* We want to allocate the CUSPARSE struct for matvec now. 4207e61fc153SStefano Zampini The code is so convoluted now that I prefer to copy zeros */ 42089566063dSJacob Faibussowitsch PetscCall(PetscArrayzero(a->a, a->nz)); 42099566063dSJacob Faibussowitsch PetscCall(MatCheckCompressedRow(A, nzr, &a->compressedrow, a->i, A->rmap->n, 0.6)); 42107e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_CPU; 42119566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 42129566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(A, PETSC_TRUE)); 42133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 42147e8381f9SStefano Zampini } 4215ed502f03SStefano Zampini 4216d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSetPreallocationCOO_SeqAIJCUSPARSE(Mat mat, PetscCount coo_n, PetscInt coo_i[], PetscInt coo_j[]) 4217d71ae5a4SJacob Faibussowitsch { 4218219fbbafSJunchao Zhang Mat_SeqAIJ *seq; 4219219fbbafSJunchao Zhang Mat_SeqAIJCUSPARSE *dev; 4220cbc6b225SStefano Zampini PetscBool coo_basic = PETSC_TRUE; 4221219fbbafSJunchao Zhang PetscMemType mtype = PETSC_MEMTYPE_DEVICE; 4222219fbbafSJunchao Zhang 4223219fbbafSJunchao Zhang PetscFunctionBegin; 42249566063dSJacob Faibussowitsch PetscCall(MatResetPreallocationCOO_SeqAIJ(mat)); 42259566063dSJacob Faibussowitsch PetscCall(MatResetPreallocationCOO_SeqAIJCUSPARSE(mat)); 4226219fbbafSJunchao Zhang if (coo_i) { 42279566063dSJacob Faibussowitsch PetscCall(PetscGetMemType(coo_i, &mtype)); 4228219fbbafSJunchao Zhang if (PetscMemTypeHost(mtype)) { 4229219fbbafSJunchao Zhang for (PetscCount k = 0; k < coo_n; k++) { 42309371c9d4SSatish Balay if (coo_i[k] < 0 || coo_j[k] < 0) { 42319371c9d4SSatish Balay coo_basic = PETSC_FALSE; 42329371c9d4SSatish Balay break; 42339371c9d4SSatish Balay } 4234219fbbafSJunchao Zhang } 4235219fbbafSJunchao Zhang } 4236219fbbafSJunchao Zhang } 4237219fbbafSJunchao Zhang 4238219fbbafSJunchao Zhang if (coo_basic) { /* i,j are on device or do not contain negative indices */ 42399566063dSJacob Faibussowitsch PetscCall(MatSetPreallocationCOO_SeqAIJCUSPARSE_Basic(mat, coo_n, coo_i, coo_j)); 4240219fbbafSJunchao Zhang } else { 42419566063dSJacob Faibussowitsch PetscCall(MatSetPreallocationCOO_SeqAIJ(mat, coo_n, coo_i, coo_j)); 4242cbc6b225SStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 42439566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(mat)); 4244219fbbafSJunchao Zhang seq = static_cast<Mat_SeqAIJ *>(mat->data); 4245219fbbafSJunchao Zhang dev = static_cast<Mat_SeqAIJCUSPARSE *>(mat->spptr); 42469566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&dev->jmap_d, (seq->nz + 1) * sizeof(PetscCount))); 42479566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(dev->jmap_d, seq->jmap, (seq->nz + 1) * sizeof(PetscCount), cudaMemcpyHostToDevice)); 42489566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&dev->perm_d, seq->Atot * sizeof(PetscCount))); 42499566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(dev->perm_d, seq->perm, seq->Atot * sizeof(PetscCount), cudaMemcpyHostToDevice)); 4250219fbbafSJunchao Zhang dev->use_extended_coo = PETSC_TRUE; 4251219fbbafSJunchao Zhang } 42523ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4253219fbbafSJunchao Zhang } 4254219fbbafSJunchao Zhang 4255d71ae5a4SJacob Faibussowitsch __global__ static void MatAddCOOValues(const PetscScalar kv[], PetscCount nnz, const PetscCount jmap[], const PetscCount perm[], InsertMode imode, PetscScalar a[]) 4256d71ae5a4SJacob Faibussowitsch { 4257219fbbafSJunchao Zhang PetscCount i = blockIdx.x * blockDim.x + threadIdx.x; 4258219fbbafSJunchao Zhang const PetscCount grid_size = gridDim.x * blockDim.x; 4259b6c38306SJunchao Zhang for (; i < nnz; i += grid_size) { 4260b6c38306SJunchao Zhang PetscScalar sum = 0.0; 4261b6c38306SJunchao Zhang for (PetscCount k = jmap[i]; k < jmap[i + 1]; k++) sum += kv[perm[k]]; 4262b6c38306SJunchao Zhang a[i] = (imode == INSERT_VALUES ? 0.0 : a[i]) + sum; 4263b6c38306SJunchao Zhang } 4264219fbbafSJunchao Zhang } 4265219fbbafSJunchao Zhang 4266d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSetValuesCOO_SeqAIJCUSPARSE(Mat A, const PetscScalar v[], InsertMode imode) 4267d71ae5a4SJacob Faibussowitsch { 4268219fbbafSJunchao Zhang Mat_SeqAIJ *seq = (Mat_SeqAIJ *)A->data; 4269219fbbafSJunchao Zhang Mat_SeqAIJCUSPARSE *dev = (Mat_SeqAIJCUSPARSE *)A->spptr; 4270219fbbafSJunchao Zhang PetscCount Annz = seq->nz; 4271219fbbafSJunchao Zhang PetscMemType memtype; 4272219fbbafSJunchao Zhang const PetscScalar *v1 = v; 4273219fbbafSJunchao Zhang PetscScalar *Aa; 4274219fbbafSJunchao Zhang 4275219fbbafSJunchao Zhang PetscFunctionBegin; 4276219fbbafSJunchao Zhang if (dev->use_extended_coo) { 42779566063dSJacob Faibussowitsch PetscCall(PetscGetMemType(v, &memtype)); 4278219fbbafSJunchao Zhang if (PetscMemTypeHost(memtype)) { /* If user gave v[] in host, we might need to copy it to device if any */ 42799566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&v1, seq->coo_n * sizeof(PetscScalar))); 42809566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy((void *)v1, v, seq->coo_n * sizeof(PetscScalar), cudaMemcpyHostToDevice)); 4281219fbbafSJunchao Zhang } 4282219fbbafSJunchao Zhang 42839566063dSJacob Faibussowitsch if (imode == INSERT_VALUES) PetscCall(MatSeqAIJCUSPARSEGetArrayWrite(A, &Aa)); 42849566063dSJacob Faibussowitsch else PetscCall(MatSeqAIJCUSPARSEGetArray(A, &Aa)); 4285219fbbafSJunchao Zhang 4286cbc6b225SStefano Zampini if (Annz) { 4287b6c38306SJunchao Zhang MatAddCOOValues<<<(Annz + 255) / 256, 256>>>(v1, Annz, dev->jmap_d, dev->perm_d, imode, Aa); 42889566063dSJacob Faibussowitsch PetscCallCUDA(cudaPeekAtLastError()); 4289cbc6b225SStefano Zampini } 4290219fbbafSJunchao Zhang 42919566063dSJacob Faibussowitsch if (imode == INSERT_VALUES) PetscCall(MatSeqAIJCUSPARSERestoreArrayWrite(A, &Aa)); 42929566063dSJacob Faibussowitsch else PetscCall(MatSeqAIJCUSPARSERestoreArray(A, &Aa)); 4293219fbbafSJunchao Zhang 42949566063dSJacob Faibussowitsch if (PetscMemTypeHost(memtype)) PetscCallCUDA(cudaFree((void *)v1)); 4295219fbbafSJunchao Zhang } else { 42969566063dSJacob Faibussowitsch PetscCall(MatSetValuesCOO_SeqAIJCUSPARSE_Basic(A, v, imode)); 4297219fbbafSJunchao Zhang } 42983ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4299219fbbafSJunchao Zhang } 4300219fbbafSJunchao Zhang 43015b7e41feSStefano Zampini /*@C 43022ef1f0ffSBarry Smith MatSeqAIJCUSPARSEGetIJ - returns the device row storage `i` and `j` indices for `MATSEQAIJCUSPARSE` matrices. 43035b7e41feSStefano Zampini 43042ef1f0ffSBarry Smith Not Collective 43055b7e41feSStefano Zampini 43065b7e41feSStefano Zampini Input Parameters: 43075b7e41feSStefano Zampini + A - the matrix 430811a5261eSBarry Smith - compressed - `PETSC_TRUE` or `PETSC_FALSE` indicating the matrix data structure should be always returned in compressed form 43095b7e41feSStefano Zampini 43105b7e41feSStefano Zampini Output Parameters: 4311*20f4b53cSBarry Smith + i - the CSR row pointers 4312*20f4b53cSBarry Smith - j - the CSR column indices 43135b7e41feSStefano Zampini 43145b7e41feSStefano Zampini Level: developer 43155b7e41feSStefano Zampini 431611a5261eSBarry Smith Note: 43175b7e41feSStefano Zampini When compressed is true, the CSR structure does not contain empty rows 43185b7e41feSStefano Zampini 43192ef1f0ffSBarry Smith .seealso: [](chapter_matrices), `Mat`, `MatSeqAIJCUSPARSERestoreIJ()`, `MatSeqAIJCUSPARSEGetArrayRead()` 43205b7e41feSStefano Zampini @*/ 4321d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJCUSPARSEGetIJ(Mat A, PetscBool compressed, const int **i, const int **j) 4322d71ae5a4SJacob Faibussowitsch { 43235f101d05SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE *)A->spptr; 43245f101d05SStefano Zampini CsrMatrix *csr; 43255f101d05SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 43265f101d05SStefano Zampini 43275f101d05SStefano Zampini PetscFunctionBegin; 43285f101d05SStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 43293ba16761SJacob Faibussowitsch if (!i || !j) PetscFunctionReturn(PETSC_SUCCESS); 43305f101d05SStefano Zampini PetscCheckTypeName(A, MATSEQAIJCUSPARSE); 4331aed4548fSBarry Smith PetscCheck(cusp->format != MAT_CUSPARSE_ELL && cusp->format != MAT_CUSPARSE_HYB, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not implemented"); 43329566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 433328b400f6SJacob Faibussowitsch PetscCheck(cusp->mat, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Mat_SeqAIJCUSPARSEMultStruct"); 43345f101d05SStefano Zampini csr = (CsrMatrix *)cusp->mat->mat; 43355f101d05SStefano Zampini if (i) { 43365f101d05SStefano Zampini if (!compressed && a->compressedrow.use) { /* need full row offset */ 43375f101d05SStefano Zampini if (!cusp->rowoffsets_gpu) { 43385f101d05SStefano Zampini cusp->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n + 1); 43395f101d05SStefano Zampini cusp->rowoffsets_gpu->assign(a->i, a->i + A->rmap->n + 1); 43409566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu((A->rmap->n + 1) * sizeof(PetscInt))); 43415f101d05SStefano Zampini } 43425f101d05SStefano Zampini *i = cusp->rowoffsets_gpu->data().get(); 43435f101d05SStefano Zampini } else *i = csr->row_offsets->data().get(); 43445f101d05SStefano Zampini } 43455f101d05SStefano Zampini if (j) *j = csr->column_indices->data().get(); 43463ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 43475f101d05SStefano Zampini } 43485f101d05SStefano Zampini 43495b7e41feSStefano Zampini /*@C 43502ef1f0ffSBarry Smith MatSeqAIJCUSPARSERestoreIJ - restore the device row storage `i` and `j` indices obtained with `MatSeqAIJCUSPARSEGetIJ()` 43515b7e41feSStefano Zampini 43522ef1f0ffSBarry Smith Not Collective 43535b7e41feSStefano Zampini 43545b7e41feSStefano Zampini Input Parameters: 43555b7e41feSStefano Zampini + A - the matrix 43562ef1f0ffSBarry Smith . compressed - `PETSC_TRUE` or `PETSC_FALSE` indicating the matrix data structure should be always returned in compressed form 4357*20f4b53cSBarry Smith . i - the CSR row pointers 4358*20f4b53cSBarry Smith - j - the CSR column indices 43595b7e41feSStefano Zampini 43605b7e41feSStefano Zampini Level: developer 43615b7e41feSStefano Zampini 43622ef1f0ffSBarry Smith .seealso: [](chapter_matrices), `Mat`, `MatSeqAIJCUSPARSEGetIJ()` 43635b7e41feSStefano Zampini @*/ 4364*20f4b53cSBarry Smith PetscErrorCode MatSeqAIJCUSPARSERestoreIJ(Mat A, PetscBool compressed, const int **i, const int **j) 4365d71ae5a4SJacob Faibussowitsch { 43665f101d05SStefano Zampini PetscFunctionBegin; 43675f101d05SStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 43685f101d05SStefano Zampini PetscCheckTypeName(A, MATSEQAIJCUSPARSE); 43695f101d05SStefano Zampini if (i) *i = NULL; 43705f101d05SStefano Zampini if (j) *j = NULL; 4371*20f4b53cSBarry Smith (void)compressed; 43723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 43735f101d05SStefano Zampini } 43745f101d05SStefano Zampini 43755b7e41feSStefano Zampini /*@C 437611a5261eSBarry Smith MatSeqAIJCUSPARSEGetArrayRead - gives read-only access to the array where the device data for a `MATSEQAIJCUSPARSE` matrix is stored 43775b7e41feSStefano Zampini 43785b7e41feSStefano Zampini Not Collective 43795b7e41feSStefano Zampini 43805b7e41feSStefano Zampini Input Parameter: 438111a5261eSBarry Smith . A - a `MATSEQAIJCUSPARSE` matrix 43825b7e41feSStefano Zampini 43835b7e41feSStefano Zampini Output Parameter: 43845b7e41feSStefano Zampini . a - pointer to the device data 43855b7e41feSStefano Zampini 43865b7e41feSStefano Zampini Level: developer 43875b7e41feSStefano Zampini 438811a5261eSBarry Smith Note: 438911a5261eSBarry Smith May trigger host-device copies if up-to-date matrix data is on host 43905b7e41feSStefano Zampini 43912ef1f0ffSBarry Smith .seealso: [](chapter_matrices), `Mat`, `MatSeqAIJCUSPARSEGetArray()`, `MatSeqAIJCUSPARSEGetArrayWrite()`, `MatSeqAIJCUSPARSERestoreArrayRead()` 43925b7e41feSStefano Zampini @*/ 4393d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJCUSPARSEGetArrayRead(Mat A, const PetscScalar **a) 4394d71ae5a4SJacob Faibussowitsch { 4395ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE *)A->spptr; 4396ed502f03SStefano Zampini CsrMatrix *csr; 4397ed502f03SStefano Zampini 4398ed502f03SStefano Zampini PetscFunctionBegin; 4399ed502f03SStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 4400ed502f03SStefano Zampini PetscValidPointer(a, 2); 4401ed502f03SStefano Zampini PetscCheckTypeName(A, MATSEQAIJCUSPARSE); 4402aed4548fSBarry Smith PetscCheck(cusp->format != MAT_CUSPARSE_ELL && cusp->format != MAT_CUSPARSE_HYB, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not implemented"); 44039566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 440428b400f6SJacob Faibussowitsch PetscCheck(cusp->mat, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Mat_SeqAIJCUSPARSEMultStruct"); 4405ed502f03SStefano Zampini csr = (CsrMatrix *)cusp->mat->mat; 440628b400f6SJacob Faibussowitsch PetscCheck(csr->values, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing CUDA memory"); 4407ed502f03SStefano Zampini *a = csr->values->data().get(); 44083ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4409ed502f03SStefano Zampini } 4410ed502f03SStefano Zampini 44115b7e41feSStefano Zampini /*@C 441211a5261eSBarry Smith MatSeqAIJCUSPARSERestoreArrayRead - restore the read-only access array obtained from `MatSeqAIJCUSPARSEGetArrayRead()` 44135b7e41feSStefano Zampini 44145b7e41feSStefano Zampini Not Collective 44155b7e41feSStefano Zampini 44162ef1f0ffSBarry Smith Input Parameters: 44172ef1f0ffSBarry Smith + A - a `MATSEQAIJCUSPARSE` matrix 44182ef1f0ffSBarry Smith - a - pointer to the device data 44195b7e41feSStefano Zampini 44205b7e41feSStefano Zampini Level: developer 44215b7e41feSStefano Zampini 44222ef1f0ffSBarry Smith .seealso: [](chapter_matrices), `Mat`, `MatSeqAIJCUSPARSEGetArrayRead()` 44235b7e41feSStefano Zampini @*/ 4424d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJCUSPARSERestoreArrayRead(Mat A, const PetscScalar **a) 4425d71ae5a4SJacob Faibussowitsch { 4426ed502f03SStefano Zampini PetscFunctionBegin; 4427ed502f03SStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 4428ed502f03SStefano Zampini PetscValidPointer(a, 2); 4429ed502f03SStefano Zampini PetscCheckTypeName(A, MATSEQAIJCUSPARSE); 4430ed502f03SStefano Zampini *a = NULL; 44313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4432ed502f03SStefano Zampini } 4433ed502f03SStefano Zampini 44345b7e41feSStefano Zampini /*@C 443511a5261eSBarry Smith MatSeqAIJCUSPARSEGetArray - gives read-write access to the array where the device data for a `MATSEQAIJCUSPARSE` matrix is stored 44365b7e41feSStefano Zampini 44375b7e41feSStefano Zampini Not Collective 44385b7e41feSStefano Zampini 44395b7e41feSStefano Zampini Input Parameter: 444011a5261eSBarry Smith . A - a `MATSEQAIJCUSPARSE` matrix 44415b7e41feSStefano Zampini 44425b7e41feSStefano Zampini Output Parameter: 44435b7e41feSStefano Zampini . a - pointer to the device data 44445b7e41feSStefano Zampini 44455b7e41feSStefano Zampini Level: developer 44465b7e41feSStefano Zampini 444711a5261eSBarry Smith Note: 444811a5261eSBarry Smith May trigger host-device copies if up-to-date matrix data is on host 44495b7e41feSStefano Zampini 44502ef1f0ffSBarry Smith .seealso: [](chapter_matrices), `Mat`, `MatSeqAIJCUSPARSEGetArrayRead()`, `MatSeqAIJCUSPARSEGetArrayWrite()`, `MatSeqAIJCUSPARSERestoreArray()` 44515b7e41feSStefano Zampini @*/ 4452d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJCUSPARSEGetArray(Mat A, PetscScalar **a) 4453d71ae5a4SJacob Faibussowitsch { 4454039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE *)A->spptr; 4455039c6fbaSStefano Zampini CsrMatrix *csr; 4456039c6fbaSStefano Zampini 4457039c6fbaSStefano Zampini PetscFunctionBegin; 4458039c6fbaSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 4459039c6fbaSStefano Zampini PetscValidPointer(a, 2); 4460039c6fbaSStefano Zampini PetscCheckTypeName(A, MATSEQAIJCUSPARSE); 4461aed4548fSBarry Smith PetscCheck(cusp->format != MAT_CUSPARSE_ELL && cusp->format != MAT_CUSPARSE_HYB, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not implemented"); 44629566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 446328b400f6SJacob Faibussowitsch PetscCheck(cusp->mat, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Mat_SeqAIJCUSPARSEMultStruct"); 4464039c6fbaSStefano Zampini csr = (CsrMatrix *)cusp->mat->mat; 446528b400f6SJacob Faibussowitsch PetscCheck(csr->values, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing CUDA memory"); 4466039c6fbaSStefano Zampini *a = csr->values->data().get(); 4467039c6fbaSStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 44689566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(A, PETSC_FALSE)); 44693ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4470039c6fbaSStefano Zampini } 44715b7e41feSStefano Zampini /*@C 447211a5261eSBarry Smith MatSeqAIJCUSPARSERestoreArray - restore the read-write access array obtained from `MatSeqAIJCUSPARSEGetArray()` 4473039c6fbaSStefano Zampini 44745b7e41feSStefano Zampini Not Collective 44755b7e41feSStefano Zampini 44762ef1f0ffSBarry Smith Input Parameters: 44772ef1f0ffSBarry Smith + A - a `MATSEQAIJCUSPARSE` matrix 44782ef1f0ffSBarry Smith - a - pointer to the device data 44795b7e41feSStefano Zampini 44805b7e41feSStefano Zampini Level: developer 44815b7e41feSStefano Zampini 44822ef1f0ffSBarry Smith .seealso: [](chapter_matrices), `Mat`, `MatSeqAIJCUSPARSEGetArray()` 44835b7e41feSStefano Zampini @*/ 4484d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJCUSPARSERestoreArray(Mat A, PetscScalar **a) 4485d71ae5a4SJacob Faibussowitsch { 4486039c6fbaSStefano Zampini PetscFunctionBegin; 4487039c6fbaSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 4488039c6fbaSStefano Zampini PetscValidPointer(a, 2); 4489039c6fbaSStefano Zampini PetscCheckTypeName(A, MATSEQAIJCUSPARSE); 44909566063dSJacob Faibussowitsch PetscCall(MatSeqAIJInvalidateDiagonal(A)); 44919566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)A)); 4492039c6fbaSStefano Zampini *a = NULL; 44933ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4494039c6fbaSStefano Zampini } 4495039c6fbaSStefano Zampini 44965b7e41feSStefano Zampini /*@C 449711a5261eSBarry Smith MatSeqAIJCUSPARSEGetArrayWrite - gives write access to the array where the device data for a `MATSEQAIJCUSPARSE` matrix is stored 44985b7e41feSStefano Zampini 44995b7e41feSStefano Zampini Not Collective 45005b7e41feSStefano Zampini 45015b7e41feSStefano Zampini Input Parameter: 450211a5261eSBarry Smith . A - a `MATSEQAIJCUSPARSE` matrix 45035b7e41feSStefano Zampini 45045b7e41feSStefano Zampini Output Parameter: 45055b7e41feSStefano Zampini . a - pointer to the device data 45065b7e41feSStefano Zampini 45075b7e41feSStefano Zampini Level: developer 45085b7e41feSStefano Zampini 450911a5261eSBarry Smith Note: 451011a5261eSBarry Smith Does not trigger host-device copies and flags data validity on the GPU 45115b7e41feSStefano Zampini 45122ef1f0ffSBarry Smith .seealso: [](chapter_matrices), `Mat`, `MatSeqAIJCUSPARSEGetArray()`, `MatSeqAIJCUSPARSEGetArrayRead()`, `MatSeqAIJCUSPARSERestoreArrayWrite()` 45135b7e41feSStefano Zampini @*/ 4514d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJCUSPARSEGetArrayWrite(Mat A, PetscScalar **a) 4515d71ae5a4SJacob Faibussowitsch { 4516ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE *)A->spptr; 4517ed502f03SStefano Zampini CsrMatrix *csr; 4518ed502f03SStefano Zampini 4519ed502f03SStefano Zampini PetscFunctionBegin; 4520ed502f03SStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 4521ed502f03SStefano Zampini PetscValidPointer(a, 2); 4522ed502f03SStefano Zampini PetscCheckTypeName(A, MATSEQAIJCUSPARSE); 4523aed4548fSBarry Smith PetscCheck(cusp->format != MAT_CUSPARSE_ELL && cusp->format != MAT_CUSPARSE_HYB, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not implemented"); 452428b400f6SJacob Faibussowitsch PetscCheck(cusp->mat, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Mat_SeqAIJCUSPARSEMultStruct"); 4525ed502f03SStefano Zampini csr = (CsrMatrix *)cusp->mat->mat; 452628b400f6SJacob Faibussowitsch PetscCheck(csr->values, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing CUDA memory"); 4527ed502f03SStefano Zampini *a = csr->values->data().get(); 4528039c6fbaSStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 45299566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(A, PETSC_FALSE)); 45303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4531ed502f03SStefano Zampini } 4532ed502f03SStefano Zampini 45335b7e41feSStefano Zampini /*@C 453411a5261eSBarry Smith MatSeqAIJCUSPARSERestoreArrayWrite - restore the write-only access array obtained from `MatSeqAIJCUSPARSEGetArrayWrite()` 45355b7e41feSStefano Zampini 45365b7e41feSStefano Zampini Not Collective 45375b7e41feSStefano Zampini 45382ef1f0ffSBarry Smith Input Parameters: 45392ef1f0ffSBarry Smith + A - a `MATSEQAIJCUSPARSE` matrix 45402ef1f0ffSBarry Smith - a - pointer to the device data 45415b7e41feSStefano Zampini 45425b7e41feSStefano Zampini Level: developer 45435b7e41feSStefano Zampini 45442ef1f0ffSBarry Smith .seealso: [](chapter_matrices), `Mat`, `MatSeqAIJCUSPARSEGetArrayWrite()` 45455b7e41feSStefano Zampini @*/ 4546d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJCUSPARSERestoreArrayWrite(Mat A, PetscScalar **a) 4547d71ae5a4SJacob Faibussowitsch { 4548ed502f03SStefano Zampini PetscFunctionBegin; 4549ed502f03SStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 4550ed502f03SStefano Zampini PetscValidPointer(a, 2); 4551ed502f03SStefano Zampini PetscCheckTypeName(A, MATSEQAIJCUSPARSE); 45529566063dSJacob Faibussowitsch PetscCall(MatSeqAIJInvalidateDiagonal(A)); 45539566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)A)); 4554ed502f03SStefano Zampini *a = NULL; 45553ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4556ed502f03SStefano Zampini } 4557ed502f03SStefano Zampini 45589371c9d4SSatish Balay struct IJCompare4 { 4559d71ae5a4SJacob Faibussowitsch __host__ __device__ inline bool operator()(const thrust::tuple<int, int, PetscScalar, int> &t1, const thrust::tuple<int, int, PetscScalar, int> &t2) 4560d71ae5a4SJacob Faibussowitsch { 4561ed502f03SStefano Zampini if (t1.get<0>() < t2.get<0>()) return true; 4562ed502f03SStefano Zampini if (t1.get<0>() == t2.get<0>()) return t1.get<1>() < t2.get<1>(); 4563ed502f03SStefano Zampini return false; 4564ed502f03SStefano Zampini } 4565ed502f03SStefano Zampini }; 4566ed502f03SStefano Zampini 45679371c9d4SSatish Balay struct Shift { 4568ed502f03SStefano Zampini int _shift; 4569ed502f03SStefano Zampini 4570ed502f03SStefano Zampini Shift(int shift) : _shift(shift) { } 45719371c9d4SSatish Balay __host__ __device__ inline int operator()(const int &c) { return c + _shift; } 4572ed502f03SStefano Zampini }; 4573ed502f03SStefano Zampini 4574ddea5d60SJunchao Zhang /* merges two SeqAIJCUSPARSE matrices A, B by concatenating their rows. [A';B']' operation in matlab notation */ 4575d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJCUSPARSEMergeMats(Mat A, Mat B, MatReuse reuse, Mat *C) 4576d71ae5a4SJacob Faibussowitsch { 4577ed502f03SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data, *b = (Mat_SeqAIJ *)B->data, *c; 4578ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp = (Mat_SeqAIJCUSPARSE *)A->spptr, *Bcusp = (Mat_SeqAIJCUSPARSE *)B->spptr, *Ccusp; 4579ed502f03SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Cmat; 4580ed502f03SStefano Zampini CsrMatrix *Acsr, *Bcsr, *Ccsr; 4581ed502f03SStefano Zampini PetscInt Annz, Bnnz; 4582ed502f03SStefano Zampini cusparseStatus_t stat; 4583ed502f03SStefano Zampini PetscInt i, m, n, zero = 0; 4584ed502f03SStefano Zampini 4585ed502f03SStefano Zampini PetscFunctionBegin; 4586ed502f03SStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 4587ed502f03SStefano Zampini PetscValidHeaderSpecific(B, MAT_CLASSID, 2); 4588ed502f03SStefano Zampini PetscValidPointer(C, 4); 4589ed502f03SStefano Zampini PetscCheckTypeName(A, MATSEQAIJCUSPARSE); 4590ed502f03SStefano Zampini PetscCheckTypeName(B, MATSEQAIJCUSPARSE); 45915f80ce2aSJacob Faibussowitsch PetscCheck(A->rmap->n == B->rmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Invalid number or rows %" PetscInt_FMT " != %" PetscInt_FMT, A->rmap->n, B->rmap->n); 459208401ef6SPierre Jolivet PetscCheck(reuse != MAT_INPLACE_MATRIX, PETSC_COMM_SELF, PETSC_ERR_SUP, "MAT_INPLACE_MATRIX not supported"); 4593aed4548fSBarry Smith PetscCheck(Acusp->format != MAT_CUSPARSE_ELL && Acusp->format != MAT_CUSPARSE_HYB, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not implemented"); 4594aed4548fSBarry Smith PetscCheck(Bcusp->format != MAT_CUSPARSE_ELL && Bcusp->format != MAT_CUSPARSE_HYB, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not implemented"); 4595ed502f03SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 4596ed502f03SStefano Zampini m = A->rmap->n; 4597ed502f03SStefano Zampini n = A->cmap->n + B->cmap->n; 45989566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, C)); 45999566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*C, m, n, m, n)); 46009566063dSJacob Faibussowitsch PetscCall(MatSetType(*C, MATSEQAIJCUSPARSE)); 4601ed502f03SStefano Zampini c = (Mat_SeqAIJ *)(*C)->data; 4602ed502f03SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE *)(*C)->spptr; 4603ed502f03SStefano Zampini Cmat = new Mat_SeqAIJCUSPARSEMultStruct; 4604ed502f03SStefano Zampini Ccsr = new CsrMatrix; 4605ed502f03SStefano Zampini Cmat->cprowIndices = NULL; 4606ed502f03SStefano Zampini c->compressedrow.use = PETSC_FALSE; 4607ed502f03SStefano Zampini c->compressedrow.nrows = 0; 4608ed502f03SStefano Zampini c->compressedrow.i = NULL; 4609ed502f03SStefano Zampini c->compressedrow.rindex = NULL; 4610ed502f03SStefano Zampini Ccusp->workVector = NULL; 4611ed502f03SStefano Zampini Ccusp->nrows = m; 4612ed502f03SStefano Zampini Ccusp->mat = Cmat; 4613ed502f03SStefano Zampini Ccusp->mat->mat = Ccsr; 4614ed502f03SStefano Zampini Ccsr->num_rows = m; 4615ed502f03SStefano Zampini Ccsr->num_cols = n; 46169566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&Cmat->descr)); 46179566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(Cmat->descr, CUSPARSE_INDEX_BASE_ZERO)); 46189566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(Cmat->descr, CUSPARSE_MATRIX_TYPE_GENERAL)); 46199566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(Cmat->alpha_one), sizeof(PetscScalar))); 46209566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(Cmat->beta_zero), sizeof(PetscScalar))); 46219566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(Cmat->beta_one), sizeof(PetscScalar))); 46229566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(Cmat->alpha_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar), cudaMemcpyHostToDevice)); 46239566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(Cmat->beta_zero, &PETSC_CUSPARSE_ZERO, sizeof(PetscScalar), cudaMemcpyHostToDevice)); 46249566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(Cmat->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar), cudaMemcpyHostToDevice)); 46259566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 46269566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(B)); 462728b400f6SJacob Faibussowitsch PetscCheck(Acusp->mat, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Mat_SeqAIJCUSPARSEMultStruct"); 462828b400f6SJacob Faibussowitsch PetscCheck(Bcusp->mat, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Mat_SeqAIJCUSPARSEMultStruct"); 4629ed502f03SStefano Zampini 4630ed502f03SStefano Zampini Acsr = (CsrMatrix *)Acusp->mat->mat; 4631ed502f03SStefano Zampini Bcsr = (CsrMatrix *)Bcusp->mat->mat; 4632ed502f03SStefano Zampini Annz = (PetscInt)Acsr->column_indices->size(); 4633ed502f03SStefano Zampini Bnnz = (PetscInt)Bcsr->column_indices->size(); 4634ed502f03SStefano Zampini c->nz = Annz + Bnnz; 4635ed502f03SStefano Zampini Ccsr->row_offsets = new THRUSTINTARRAY32(m + 1); 4636ed502f03SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 4637ed502f03SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 4638ed502f03SStefano Zampini Ccsr->num_entries = c->nz; 4639ed502f03SStefano Zampini Ccusp->cooPerm = new THRUSTINTARRAY(c->nz); 4640ed502f03SStefano Zampini if (c->nz) { 46412ed87e7eSStefano Zampini auto Acoo = new THRUSTINTARRAY32(Annz); 46422ed87e7eSStefano Zampini auto Bcoo = new THRUSTINTARRAY32(Bnnz); 46432ed87e7eSStefano Zampini auto Ccoo = new THRUSTINTARRAY32(c->nz); 46442ed87e7eSStefano Zampini THRUSTINTARRAY32 *Aroff, *Broff; 46452ed87e7eSStefano Zampini 4646ed502f03SStefano Zampini if (a->compressedrow.use) { /* need full row offset */ 4647ed502f03SStefano Zampini if (!Acusp->rowoffsets_gpu) { 4648ed502f03SStefano Zampini Acusp->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n + 1); 4649ed502f03SStefano Zampini Acusp->rowoffsets_gpu->assign(a->i, a->i + A->rmap->n + 1); 46509566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu((A->rmap->n + 1) * sizeof(PetscInt))); 4651ed502f03SStefano Zampini } 46522ed87e7eSStefano Zampini Aroff = Acusp->rowoffsets_gpu; 46532ed87e7eSStefano Zampini } else Aroff = Acsr->row_offsets; 4654ed502f03SStefano Zampini if (b->compressedrow.use) { /* need full row offset */ 4655ed502f03SStefano Zampini if (!Bcusp->rowoffsets_gpu) { 4656ed502f03SStefano Zampini Bcusp->rowoffsets_gpu = new THRUSTINTARRAY32(B->rmap->n + 1); 4657ed502f03SStefano Zampini Bcusp->rowoffsets_gpu->assign(b->i, b->i + B->rmap->n + 1); 46589566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu((B->rmap->n + 1) * sizeof(PetscInt))); 4659ed502f03SStefano Zampini } 46602ed87e7eSStefano Zampini Broff = Bcusp->rowoffsets_gpu; 46612ed87e7eSStefano Zampini } else Broff = Bcsr->row_offsets; 46629566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 46639371c9d4SSatish Balay stat = cusparseXcsr2coo(Acusp->handle, Aroff->data().get(), Annz, m, Acoo->data().get(), CUSPARSE_INDEX_BASE_ZERO); 46649371c9d4SSatish Balay PetscCallCUSPARSE(stat); 46659371c9d4SSatish Balay stat = cusparseXcsr2coo(Bcusp->handle, Broff->data().get(), Bnnz, m, Bcoo->data().get(), CUSPARSE_INDEX_BASE_ZERO); 46669371c9d4SSatish Balay PetscCallCUSPARSE(stat); 46672ed87e7eSStefano Zampini /* Issues when using bool with large matrices on SUMMIT 10.2.89 */ 46682ed87e7eSStefano Zampini auto Aperm = thrust::make_constant_iterator(1); 46692ed87e7eSStefano Zampini auto Bperm = thrust::make_constant_iterator(0); 46708909a122SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(10, 0, 0) 4671ed502f03SStefano Zampini auto Bcib = thrust::make_transform_iterator(Bcsr->column_indices->begin(), Shift(A->cmap->n)); 4672ed502f03SStefano Zampini auto Bcie = thrust::make_transform_iterator(Bcsr->column_indices->end(), Shift(A->cmap->n)); 46738909a122SStefano Zampini #else 46748909a122SStefano Zampini /* there are issues instantiating the merge operation using a transform iterator for the columns of B */ 46758909a122SStefano Zampini auto Bcib = Bcsr->column_indices->begin(); 46768909a122SStefano Zampini auto Bcie = Bcsr->column_indices->end(); 46778909a122SStefano Zampini thrust::transform(Bcib, Bcie, Bcib, Shift(A->cmap->n)); 46788909a122SStefano Zampini #endif 46792ed87e7eSStefano Zampini auto wPerm = new THRUSTINTARRAY32(Annz + Bnnz); 46802ed87e7eSStefano Zampini auto Azb = thrust::make_zip_iterator(thrust::make_tuple(Acoo->begin(), Acsr->column_indices->begin(), Acsr->values->begin(), Aperm)); 46812ed87e7eSStefano Zampini auto Aze = thrust::make_zip_iterator(thrust::make_tuple(Acoo->end(), Acsr->column_indices->end(), Acsr->values->end(), Aperm)); 46822ed87e7eSStefano Zampini auto Bzb = thrust::make_zip_iterator(thrust::make_tuple(Bcoo->begin(), Bcib, Bcsr->values->begin(), Bperm)); 46832ed87e7eSStefano Zampini auto Bze = thrust::make_zip_iterator(thrust::make_tuple(Bcoo->end(), Bcie, Bcsr->values->end(), Bperm)); 46842ed87e7eSStefano Zampini auto Czb = thrust::make_zip_iterator(thrust::make_tuple(Ccoo->begin(), Ccsr->column_indices->begin(), Ccsr->values->begin(), wPerm->begin())); 4685ed502f03SStefano Zampini auto p1 = Ccusp->cooPerm->begin(); 4686ed502f03SStefano Zampini auto p2 = Ccusp->cooPerm->begin(); 4687ed502f03SStefano Zampini thrust::advance(p2, Annz); 4688792fecdfSBarry Smith PetscCallThrust(thrust::merge(thrust::device, Azb, Aze, Bzb, Bze, Czb, IJCompare4())); 46898909a122SStefano Zampini #if PETSC_PKG_CUDA_VERSION_LT(10, 0, 0) 46908909a122SStefano Zampini thrust::transform(Bcib, Bcie, Bcib, Shift(-A->cmap->n)); 46918909a122SStefano Zampini #endif 46922ed87e7eSStefano Zampini auto cci = thrust::make_counting_iterator(zero); 46932ed87e7eSStefano Zampini auto cce = thrust::make_counting_iterator(c->nz); 46942ed87e7eSStefano Zampini #if 0 //Errors on SUMMIT cuda 11.1.0 4695792fecdfSBarry Smith PetscCallThrust(thrust::partition_copy(thrust::device,cci,cce,wPerm->begin(),p1,p2,thrust::identity<int>())); 46962ed87e7eSStefano Zampini #else 46972ed87e7eSStefano Zampini auto pred = thrust::identity<int>(); 4698792fecdfSBarry Smith PetscCallThrust(thrust::copy_if(thrust::device, cci, cce, wPerm->begin(), p1, pred)); 4699792fecdfSBarry Smith PetscCallThrust(thrust::remove_copy_if(thrust::device, cci, cce, wPerm->begin(), p2, pred)); 47002ed87e7eSStefano Zampini #endif 47019371c9d4SSatish Balay stat = cusparseXcoo2csr(Ccusp->handle, Ccoo->data().get(), c->nz, m, Ccsr->row_offsets->data().get(), CUSPARSE_INDEX_BASE_ZERO); 47029371c9d4SSatish Balay PetscCallCUSPARSE(stat); 47039566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 47042ed87e7eSStefano Zampini delete wPerm; 47052ed87e7eSStefano Zampini delete Acoo; 47062ed87e7eSStefano Zampini delete Bcoo; 47072ed87e7eSStefano Zampini delete Ccoo; 4708ed502f03SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 47099371c9d4SSatish Balay stat = cusparseCreateCsr(&Cmat->matDescr, Ccsr->num_rows, Ccsr->num_cols, Ccsr->num_entries, Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get(), Ccsr->values->data().get(), CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype); 47109371c9d4SSatish Balay PetscCallCUSPARSE(stat); 4711ed502f03SStefano Zampini #endif 47121a2c6b5cSJunchao Zhang if (A->form_explicit_transpose && B->form_explicit_transpose) { /* if A and B have the transpose, generate C transpose too */ 47139566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEFormExplicitTranspose(A)); 47149566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEFormExplicitTranspose(B)); 4715ed502f03SStefano Zampini PetscBool AT = Acusp->matTranspose ? PETSC_TRUE : PETSC_FALSE, BT = Bcusp->matTranspose ? PETSC_TRUE : PETSC_FALSE; 4716ed502f03SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *CmatT = new Mat_SeqAIJCUSPARSEMultStruct; 4717ed502f03SStefano Zampini CsrMatrix *CcsrT = new CsrMatrix; 4718ed502f03SStefano Zampini CsrMatrix *AcsrT = AT ? (CsrMatrix *)Acusp->matTranspose->mat : NULL; 4719ed502f03SStefano Zampini CsrMatrix *BcsrT = BT ? (CsrMatrix *)Bcusp->matTranspose->mat : NULL; 4720ed502f03SStefano Zampini 47211a2c6b5cSJunchao Zhang (*C)->form_explicit_transpose = PETSC_TRUE; 47221a2c6b5cSJunchao Zhang (*C)->transupdated = PETSC_TRUE; 4723a49f1ed0SStefano Zampini Ccusp->rowoffsets_gpu = NULL; 4724ed502f03SStefano Zampini CmatT->cprowIndices = NULL; 4725ed502f03SStefano Zampini CmatT->mat = CcsrT; 4726ed502f03SStefano Zampini CcsrT->num_rows = n; 4727ed502f03SStefano Zampini CcsrT->num_cols = m; 4728ed502f03SStefano Zampini CcsrT->num_entries = c->nz; 4729ed502f03SStefano Zampini 4730ed502f03SStefano Zampini CcsrT->row_offsets = new THRUSTINTARRAY32(n + 1); 4731ed502f03SStefano Zampini CcsrT->column_indices = new THRUSTINTARRAY32(c->nz); 4732ed502f03SStefano Zampini CcsrT->values = new THRUSTARRAY(c->nz); 4733ed502f03SStefano Zampini 47349566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 4735ed502f03SStefano Zampini auto rT = CcsrT->row_offsets->begin(); 4736ed502f03SStefano Zampini if (AT) { 4737ed502f03SStefano Zampini rT = thrust::copy(AcsrT->row_offsets->begin(), AcsrT->row_offsets->end(), rT); 4738ed502f03SStefano Zampini thrust::advance(rT, -1); 4739ed502f03SStefano Zampini } 4740ed502f03SStefano Zampini if (BT) { 4741ed502f03SStefano Zampini auto titb = thrust::make_transform_iterator(BcsrT->row_offsets->begin(), Shift(a->nz)); 4742ed502f03SStefano Zampini auto tite = thrust::make_transform_iterator(BcsrT->row_offsets->end(), Shift(a->nz)); 4743ed502f03SStefano Zampini thrust::copy(titb, tite, rT); 4744ed502f03SStefano Zampini } 4745ed502f03SStefano Zampini auto cT = CcsrT->column_indices->begin(); 4746ed502f03SStefano Zampini if (AT) cT = thrust::copy(AcsrT->column_indices->begin(), AcsrT->column_indices->end(), cT); 4747ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->column_indices->begin(), BcsrT->column_indices->end(), cT); 4748ed502f03SStefano Zampini auto vT = CcsrT->values->begin(); 4749ed502f03SStefano Zampini if (AT) vT = thrust::copy(AcsrT->values->begin(), AcsrT->values->end(), vT); 4750ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->values->begin(), BcsrT->values->end(), vT); 47519566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 4752ed502f03SStefano Zampini 47539566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseCreateMatDescr(&CmatT->descr)); 47549566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatIndexBase(CmatT->descr, CUSPARSE_INDEX_BASE_ZERO)); 47559566063dSJacob Faibussowitsch PetscCallCUSPARSE(cusparseSetMatType(CmatT->descr, CUSPARSE_MATRIX_TYPE_GENERAL)); 47569566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(CmatT->alpha_one), sizeof(PetscScalar))); 47579566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(CmatT->beta_zero), sizeof(PetscScalar))); 47589566063dSJacob Faibussowitsch PetscCallCUDA(cudaMalloc((void **)&(CmatT->beta_one), sizeof(PetscScalar))); 47599566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(CmatT->alpha_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar), cudaMemcpyHostToDevice)); 47609566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(CmatT->beta_zero, &PETSC_CUSPARSE_ZERO, sizeof(PetscScalar), cudaMemcpyHostToDevice)); 47619566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(CmatT->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar), cudaMemcpyHostToDevice)); 4762ed502f03SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11, 0, 0) 47639371c9d4SSatish Balay stat = cusparseCreateCsr(&CmatT->matDescr, CcsrT->num_rows, CcsrT->num_cols, CcsrT->num_entries, CcsrT->row_offsets->data().get(), CcsrT->column_indices->data().get(), CcsrT->values->data().get(), CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype); 47649371c9d4SSatish Balay PetscCallCUSPARSE(stat); 4765ed502f03SStefano Zampini #endif 4766ed502f03SStefano Zampini Ccusp->matTranspose = CmatT; 4767ed502f03SStefano Zampini } 4768ed502f03SStefano Zampini } 4769ed502f03SStefano Zampini 4770ed502f03SStefano Zampini c->singlemalloc = PETSC_FALSE; 4771ed502f03SStefano Zampini c->free_a = PETSC_TRUE; 4772ed502f03SStefano Zampini c->free_ij = PETSC_TRUE; 47739566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m + 1, &c->i)); 47749566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(c->nz, &c->j)); 4775ed502f03SStefano Zampini if (PetscDefined(USE_64BIT_INDICES)) { /* 32 to 64 bit conversion on the GPU and then copy to host (lazy) */ 4776ed502f03SStefano Zampini THRUSTINTARRAY ii(Ccsr->row_offsets->size()); 4777ed502f03SStefano Zampini THRUSTINTARRAY jj(Ccsr->column_indices->size()); 4778ed502f03SStefano Zampini ii = *Ccsr->row_offsets; 4779ed502f03SStefano Zampini jj = *Ccsr->column_indices; 47809566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(c->i, ii.data().get(), Ccsr->row_offsets->size() * sizeof(PetscInt), cudaMemcpyDeviceToHost)); 47819566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(c->j, jj.data().get(), Ccsr->column_indices->size() * sizeof(PetscInt), cudaMemcpyDeviceToHost)); 4782ed502f03SStefano Zampini } else { 47839566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(c->i, Ccsr->row_offsets->data().get(), Ccsr->row_offsets->size() * sizeof(PetscInt), cudaMemcpyDeviceToHost)); 47849566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(c->j, Ccsr->column_indices->data().get(), Ccsr->column_indices->size() * sizeof(PetscInt), cudaMemcpyDeviceToHost)); 4785ed502f03SStefano Zampini } 47869566063dSJacob Faibussowitsch PetscCall(PetscLogGpuToCpu((Ccsr->column_indices->size() + Ccsr->row_offsets->size()) * sizeof(PetscInt))); 47879566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m, &c->ilen)); 47889566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m, &c->imax)); 4789ed502f03SStefano Zampini c->maxnz = c->nz; 4790ed502f03SStefano Zampini c->nonzerorowcnt = 0; 4791ed502f03SStefano Zampini c->rmax = 0; 4792ed502f03SStefano Zampini for (i = 0; i < m; i++) { 4793ed502f03SStefano Zampini const PetscInt nn = c->i[i + 1] - c->i[i]; 4794ed502f03SStefano Zampini c->ilen[i] = c->imax[i] = nn; 4795ed502f03SStefano Zampini c->nonzerorowcnt += (PetscInt) !!nn; 4796ed502f03SStefano Zampini c->rmax = PetscMax(c->rmax, nn); 4797ed502f03SStefano Zampini } 47989566063dSJacob Faibussowitsch PetscCall(MatMarkDiagonal_SeqAIJ(*C)); 47999566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(c->nz, &c->a)); 4800ed502f03SStefano Zampini (*C)->nonzerostate++; 48019566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp((*C)->rmap)); 48029566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp((*C)->cmap)); 4803ed502f03SStefano Zampini Ccusp->nonzerostate = (*C)->nonzerostate; 4804ed502f03SStefano Zampini (*C)->preallocated = PETSC_TRUE; 4805ed502f03SStefano Zampini } else { 480608401ef6SPierre Jolivet PetscCheck((*C)->rmap->n == B->rmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Invalid number or rows %" PetscInt_FMT " != %" PetscInt_FMT, (*C)->rmap->n, B->rmap->n); 4807ed502f03SStefano Zampini c = (Mat_SeqAIJ *)(*C)->data; 4808ed502f03SStefano Zampini if (c->nz) { 4809ed502f03SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE *)(*C)->spptr; 48105f80ce2aSJacob Faibussowitsch PetscCheck(Ccusp->cooPerm, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing cooPerm"); 4811aed4548fSBarry Smith PetscCheck(Ccusp->format != MAT_CUSPARSE_ELL && Ccusp->format != MAT_CUSPARSE_HYB, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not implemented"); 481208401ef6SPierre Jolivet PetscCheck(Ccusp->nonzerostate == (*C)->nonzerostate, PETSC_COMM_SELF, PETSC_ERR_COR, "Wrong nonzerostate"); 48139566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(A)); 48149566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSECopyToGPU(B)); 48155f80ce2aSJacob Faibussowitsch PetscCheck(Acusp->mat, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Mat_SeqAIJCUSPARSEMultStruct"); 48165f80ce2aSJacob Faibussowitsch PetscCheck(Bcusp->mat, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Mat_SeqAIJCUSPARSEMultStruct"); 4817ed502f03SStefano Zampini Acsr = (CsrMatrix *)Acusp->mat->mat; 4818ed502f03SStefano Zampini Bcsr = (CsrMatrix *)Bcusp->mat->mat; 4819ed502f03SStefano Zampini Ccsr = (CsrMatrix *)Ccusp->mat->mat; 4820aed4548fSBarry Smith PetscCheck(Acsr->num_entries == (PetscInt)Acsr->values->size(), PETSC_COMM_SELF, PETSC_ERR_COR, "A nnz %" PetscInt_FMT " != %" PetscInt_FMT, Acsr->num_entries, (PetscInt)Acsr->values->size()); 4821aed4548fSBarry Smith PetscCheck(Bcsr->num_entries == (PetscInt)Bcsr->values->size(), PETSC_COMM_SELF, PETSC_ERR_COR, "B nnz %" PetscInt_FMT " != %" PetscInt_FMT, Bcsr->num_entries, (PetscInt)Bcsr->values->size()); 4822aed4548fSBarry Smith PetscCheck(Ccsr->num_entries == (PetscInt)Ccsr->values->size(), PETSC_COMM_SELF, PETSC_ERR_COR, "C nnz %" PetscInt_FMT " != %" PetscInt_FMT, Ccsr->num_entries, (PetscInt)Ccsr->values->size()); 4823aed4548fSBarry Smith PetscCheck(Ccsr->num_entries == Acsr->num_entries + Bcsr->num_entries, PETSC_COMM_SELF, PETSC_ERR_COR, "C nnz %" PetscInt_FMT " != %" PetscInt_FMT " + %" PetscInt_FMT, Ccsr->num_entries, Acsr->num_entries, Bcsr->num_entries); 48245f80ce2aSJacob Faibussowitsch PetscCheck(Ccusp->cooPerm->size() == Ccsr->values->size(), PETSC_COMM_SELF, PETSC_ERR_COR, "permSize %" PetscInt_FMT " != %" PetscInt_FMT, (PetscInt)Ccusp->cooPerm->size(), (PetscInt)Ccsr->values->size()); 4825ed502f03SStefano Zampini auto pmid = Ccusp->cooPerm->begin(); 4826ed502f03SStefano Zampini thrust::advance(pmid, Acsr->num_entries); 48279566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 48289371c9d4SSatish Balay auto zibait = thrust::make_zip_iterator(thrust::make_tuple(Acsr->values->begin(), thrust::make_permutation_iterator(Ccsr->values->begin(), Ccusp->cooPerm->begin()))); 48299371c9d4SSatish Balay auto zieait = thrust::make_zip_iterator(thrust::make_tuple(Acsr->values->end(), thrust::make_permutation_iterator(Ccsr->values->begin(), pmid))); 4830ed502f03SStefano Zampini thrust::for_each(zibait, zieait, VecCUDAEquals()); 48319371c9d4SSatish Balay auto zibbit = thrust::make_zip_iterator(thrust::make_tuple(Bcsr->values->begin(), thrust::make_permutation_iterator(Ccsr->values->begin(), pmid))); 48329371c9d4SSatish Balay auto ziebit = thrust::make_zip_iterator(thrust::make_tuple(Bcsr->values->end(), thrust::make_permutation_iterator(Ccsr->values->begin(), Ccusp->cooPerm->end()))); 4833ed502f03SStefano Zampini thrust::for_each(zibbit, ziebit, VecCUDAEquals()); 48349566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEInvalidateTranspose(*C, PETSC_FALSE)); 48351a2c6b5cSJunchao Zhang if (A->form_explicit_transpose && B->form_explicit_transpose && (*C)->form_explicit_transpose) { 48365f80ce2aSJacob Faibussowitsch PetscCheck(Ccusp->matTranspose, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing transpose Mat_SeqAIJCUSPARSEMultStruct"); 4837ed502f03SStefano Zampini PetscBool AT = Acusp->matTranspose ? PETSC_TRUE : PETSC_FALSE, BT = Bcusp->matTranspose ? PETSC_TRUE : PETSC_FALSE; 4838ed502f03SStefano Zampini CsrMatrix *AcsrT = AT ? (CsrMatrix *)Acusp->matTranspose->mat : NULL; 4839ed502f03SStefano Zampini CsrMatrix *BcsrT = BT ? (CsrMatrix *)Bcusp->matTranspose->mat : NULL; 4840ed502f03SStefano Zampini CsrMatrix *CcsrT = (CsrMatrix *)Ccusp->matTranspose->mat; 4841ed502f03SStefano Zampini auto vT = CcsrT->values->begin(); 4842ed502f03SStefano Zampini if (AT) vT = thrust::copy(AcsrT->values->begin(), AcsrT->values->end(), vT); 4843ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->values->begin(), BcsrT->values->end(), vT); 48441a2c6b5cSJunchao Zhang (*C)->transupdated = PETSC_TRUE; 4845ed502f03SStefano Zampini } 48469566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 4847ed502f03SStefano Zampini } 4848ed502f03SStefano Zampini } 48499566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)*C)); 4850ed502f03SStefano Zampini (*C)->assembled = PETSC_TRUE; 4851ed502f03SStefano Zampini (*C)->was_assembled = PETSC_FALSE; 4852ed502f03SStefano Zampini (*C)->offloadmask = PETSC_OFFLOAD_GPU; 48533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4854ed502f03SStefano Zampini } 4855c215019aSStefano Zampini 4856d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJCopySubArray_SeqAIJCUSPARSE(Mat A, PetscInt n, const PetscInt idx[], PetscScalar v[]) 4857d71ae5a4SJacob Faibussowitsch { 4858c215019aSStefano Zampini bool dmem; 4859c215019aSStefano Zampini const PetscScalar *av; 4860c215019aSStefano Zampini 4861c215019aSStefano Zampini PetscFunctionBegin; 4862c215019aSStefano Zampini dmem = isCudaMem(v); 48639566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSEGetArrayRead(A, &av)); 4864c215019aSStefano Zampini if (n && idx) { 4865c215019aSStefano Zampini THRUSTINTARRAY widx(n); 4866c215019aSStefano Zampini widx.assign(idx, idx + n); 48679566063dSJacob Faibussowitsch PetscCall(PetscLogCpuToGpu(n * sizeof(PetscInt))); 4868c215019aSStefano Zampini 4869c215019aSStefano Zampini THRUSTARRAY *w = NULL; 4870c215019aSStefano Zampini thrust::device_ptr<PetscScalar> dv; 4871c215019aSStefano Zampini if (dmem) { 4872c215019aSStefano Zampini dv = thrust::device_pointer_cast(v); 4873c215019aSStefano Zampini } else { 4874c215019aSStefano Zampini w = new THRUSTARRAY(n); 4875c215019aSStefano Zampini dv = w->data(); 4876c215019aSStefano Zampini } 4877c215019aSStefano Zampini thrust::device_ptr<const PetscScalar> dav = thrust::device_pointer_cast(av); 4878c215019aSStefano Zampini 4879c215019aSStefano Zampini auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(dav, widx.begin()), dv)); 4880c215019aSStefano Zampini auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(dav, widx.end()), dv + n)); 4881c215019aSStefano Zampini thrust::for_each(zibit, zieit, VecCUDAEquals()); 488248a46eb9SPierre Jolivet if (w) PetscCallCUDA(cudaMemcpy(v, w->data().get(), n * sizeof(PetscScalar), cudaMemcpyDeviceToHost)); 4883c215019aSStefano Zampini delete w; 4884c215019aSStefano Zampini } else { 48859566063dSJacob Faibussowitsch PetscCallCUDA(cudaMemcpy(v, av, n * sizeof(PetscScalar), dmem ? cudaMemcpyDeviceToDevice : cudaMemcpyDeviceToHost)); 4886c215019aSStefano Zampini } 48879566063dSJacob Faibussowitsch if (!dmem) PetscCall(PetscLogCpuToGpu(n * sizeof(PetscScalar))); 48889566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCUSPARSERestoreArrayRead(A, &av)); 48893ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4890c215019aSStefano Zampini } 4891