19ae82921SPaul Mullowney /* 29ae82921SPaul Mullowney Defines the basic matrix operations for the AIJ (compressed row) 3fd7c363cSSatish Balay matrix storage format using the CUSPARSE library, 49ae82921SPaul Mullowney */ 5dced61a5SBarry Smith #define PETSC_SKIP_SPINLOCK 699acd6aaSStefano Zampini #define PETSC_SKIP_IMMINTRIN_H_CUDAWORKAROUND 1 79ae82921SPaul Mullowney 83d13b8fdSMatthew G. Knepley #include <petscconf.h> 93d13b8fdSMatthew G. Knepley #include <../src/mat/impls/aij/seq/aij.h> /*I "petscmat.h" I*/ 10087f3262SPaul Mullowney #include <../src/mat/impls/sbaij/seq/sbaij.h> 113d13b8fdSMatthew G. Knepley #include <../src/vec/vec/impls/dvecimpl.h> 12af0996ceSBarry Smith #include <petsc/private/vecimpl.h> 139ae82921SPaul Mullowney #undef VecType 143d13b8fdSMatthew G. Knepley #include <../src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h> 15a0e72f99SJunchao Zhang #include <thrust/async/for_each.h> 16e8d2b73aSMark Adams 17e057df02SPaul Mullowney const char *const MatCUSPARSEStorageFormats[] = {"CSR","ELL","HYB","MatCUSPARSEStorageFormat","MAT_CUSPARSE_",0}; 18afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 19afb2bd1cSJunchao Zhang /* The following are copied from cusparse.h in CUDA-11.0. In MatCUSPARSESpMVAlgorithms[] etc, we copy them in 20afb2bd1cSJunchao Zhang 0-based integer value order, since we want to use PetscOptionsEnum() to parse user command line options for them. 21afb2bd1cSJunchao Zhang 22afb2bd1cSJunchao Zhang typedef enum { 23afb2bd1cSJunchao Zhang CUSPARSE_MV_ALG_DEFAULT = 0, 24afb2bd1cSJunchao Zhang CUSPARSE_COOMV_ALG = 1, 25afb2bd1cSJunchao Zhang CUSPARSE_CSRMV_ALG1 = 2, 26afb2bd1cSJunchao Zhang CUSPARSE_CSRMV_ALG2 = 3 27afb2bd1cSJunchao Zhang } cusparseSpMVAlg_t; 28afb2bd1cSJunchao Zhang 29afb2bd1cSJunchao Zhang typedef enum { 30afb2bd1cSJunchao Zhang CUSPARSE_MM_ALG_DEFAULT CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_ALG_DEFAULT) = 0, 31afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG1 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG1) = 1, 32afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG2 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG2) = 2, 33afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG3 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG3) = 3, 34afb2bd1cSJunchao Zhang CUSPARSE_CSRMM_ALG1 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_CSR_ALG1) = 4, 35afb2bd1cSJunchao Zhang CUSPARSE_SPMM_ALG_DEFAULT = 0, 36afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG1 = 1, 37afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG2 = 2, 38afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG3 = 3, 39afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG4 = 5, 40afb2bd1cSJunchao Zhang CUSPARSE_SPMM_CSR_ALG1 = 4, 41afb2bd1cSJunchao Zhang CUSPARSE_SPMM_CSR_ALG2 = 6, 42afb2bd1cSJunchao Zhang } cusparseSpMMAlg_t; 43afb2bd1cSJunchao Zhang 44afb2bd1cSJunchao Zhang typedef enum { 45afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG1 = 1, // faster than V2 (in general), deterministc 46afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG2 = 2 // low memory requirement, non-deterministc 47afb2bd1cSJunchao Zhang } cusparseCsr2CscAlg_t; 48afb2bd1cSJunchao Zhang */ 49afb2bd1cSJunchao Zhang const char *const MatCUSPARSESpMVAlgorithms[] = {"MV_ALG_DEFAULT","COOMV_ALG", "CSRMV_ALG1","CSRMV_ALG2", "cusparseSpMVAlg_t","CUSPARSE_",0}; 50afb2bd1cSJunchao Zhang const char *const MatCUSPARSESpMMAlgorithms[] = {"ALG_DEFAULT","COO_ALG1","COO_ALG2","COO_ALG3","CSR_ALG1","COO_ALG4","CSR_ALG2","cusparseSpMMAlg_t","CUSPARSE_SPMM_",0}; 51afb2bd1cSJunchao Zhang const char *const MatCUSPARSECsr2CscAlgorithms[] = {"INVALID"/*cusparse does not have enum 0! We created one*/,"ALG1","ALG2","cusparseCsr2CscAlg_t","CUSPARSE_CSR2CSC_",0}; 52afb2bd1cSJunchao Zhang #endif 539ae82921SPaul Mullowney 54087f3262SPaul Mullowney static PetscErrorCode MatICCFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,const MatFactorInfo*); 55087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,const MatFactorInfo*); 56087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorNumeric_SeqAIJCUSPARSE(Mat,Mat,const MatFactorInfo*); 57087f3262SPaul Mullowney 586fa9248bSJed Brown static PetscErrorCode MatILUFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,IS,const MatFactorInfo*); 596fa9248bSJed Brown static PetscErrorCode MatLUFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,IS,const MatFactorInfo*); 606fa9248bSJed Brown static PetscErrorCode MatLUFactorNumeric_SeqAIJCUSPARSE(Mat,Mat,const MatFactorInfo*); 61087f3262SPaul Mullowney 626fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE(Mat,Vec,Vec); 636fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE_NaturalOrdering(Mat,Vec,Vec); 646fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE(Mat,Vec,Vec); 656fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering(Mat,Vec,Vec); 664416b707SBarry Smith static PetscErrorCode MatSetFromOptions_SeqAIJCUSPARSE(PetscOptionItems *PetscOptionsObject,Mat); 67a587d139SMark static PetscErrorCode MatAXPY_SeqAIJCUSPARSE(Mat,PetscScalar,Mat,MatStructure); 6833c9ba73SStefano Zampini static PetscErrorCode MatScale_SeqAIJCUSPARSE(Mat,PetscScalar); 696fa9248bSJed Brown static PetscErrorCode MatMult_SeqAIJCUSPARSE(Mat,Vec,Vec); 706fa9248bSJed Brown static PetscErrorCode MatMultAdd_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec); 716fa9248bSJed Brown static PetscErrorCode MatMultTranspose_SeqAIJCUSPARSE(Mat,Vec,Vec); 726fa9248bSJed Brown static PetscErrorCode MatMultTransposeAdd_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec); 73e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTranspose_SeqAIJCUSPARSE(Mat,Vec,Vec); 74e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTransposeAdd_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec); 75e6e9a74fSStefano Zampini static PetscErrorCode MatMultAddKernel_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec,PetscBool,PetscBool); 769ae82921SPaul Mullowney 777f756511SDominic Meiser static PetscErrorCode CsrMatrix_Destroy(CsrMatrix**); 78470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSETriFactorStruct**); 79470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSEMultStruct**,MatCUSPARSEStorageFormat); 80470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSETriFactors_Destroy(Mat_SeqAIJCUSPARSETriFactors**); 81470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSE_Destroy(Mat_SeqAIJCUSPARSE**); 827f756511SDominic Meiser 83042217e8SBarry Smith PETSC_INTERN PetscErrorCode MatSeqAIJCUSPARSECopyToGPU(Mat); 8457181aedSStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSECopyFromGPU(Mat); 85a49f1ed0SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSEInvalidateTranspose(Mat,PetscBool); 8657181aedSStefano Zampini 877e8381f9SStefano Zampini PETSC_INTERN PetscErrorCode MatSetPreallocationCOO_SeqAIJCUSPARSE(Mat,PetscInt,const PetscInt[],const PetscInt[]); 887e8381f9SStefano Zampini PETSC_INTERN PetscErrorCode MatSetValuesCOO_SeqAIJCUSPARSE(Mat,const PetscScalar[],InsertMode); 897e8381f9SStefano Zampini 90c215019aSStefano Zampini static PetscErrorCode MatSeqAIJCopySubArray_SeqAIJCUSPARSE(Mat,PetscInt,const PetscInt[],PetscScalar[]); 91c215019aSStefano Zampini 92b06137fdSPaul Mullowney PetscErrorCode MatCUSPARSESetStream(Mat A,const cudaStream_t stream) 93b06137fdSPaul Mullowney { 94b06137fdSPaul Mullowney cusparseStatus_t stat; 95b06137fdSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 96b06137fdSPaul Mullowney 97b06137fdSPaul Mullowney PetscFunctionBegin; 98d98d7c49SStefano Zampini if (!cusparsestruct) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing spptr"); 99b06137fdSPaul Mullowney cusparsestruct->stream = stream; 10057d48284SJunchao Zhang stat = cusparseSetStream(cusparsestruct->handle,cusparsestruct->stream);CHKERRCUSPARSE(stat); 101b06137fdSPaul Mullowney PetscFunctionReturn(0); 102b06137fdSPaul Mullowney } 103b06137fdSPaul Mullowney 104b06137fdSPaul Mullowney PetscErrorCode MatCUSPARSESetHandle(Mat A,const cusparseHandle_t handle) 105b06137fdSPaul Mullowney { 106b06137fdSPaul Mullowney cusparseStatus_t stat; 107b06137fdSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 108b06137fdSPaul Mullowney 109b06137fdSPaul Mullowney PetscFunctionBegin; 110d98d7c49SStefano Zampini if (!cusparsestruct) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing spptr"); 1116b1cf21dSAlejandro Lamas Daviña if (cusparsestruct->handle != handle) { 11216a2e217SAlejandro Lamas Daviña if (cusparsestruct->handle) { 11357d48284SJunchao Zhang stat = cusparseDestroy(cusparsestruct->handle);CHKERRCUSPARSE(stat); 11416a2e217SAlejandro Lamas Daviña } 115b06137fdSPaul Mullowney cusparsestruct->handle = handle; 1166b1cf21dSAlejandro Lamas Daviña } 11757d48284SJunchao Zhang stat = cusparseSetPointerMode(cusparsestruct->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 118b06137fdSPaul Mullowney PetscFunctionReturn(0); 119b06137fdSPaul Mullowney } 120b06137fdSPaul Mullowney 121b06137fdSPaul Mullowney PetscErrorCode MatCUSPARSEClearHandle(Mat A) 122b06137fdSPaul Mullowney { 123b06137fdSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 1247e8381f9SStefano Zampini PetscBool flg; 1257e8381f9SStefano Zampini PetscErrorCode ierr; 126ccdfe979SStefano Zampini 127b06137fdSPaul Mullowney PetscFunctionBegin; 1287e8381f9SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 1297e8381f9SStefano Zampini if (!flg || !cusparsestruct) PetscFunctionReturn(0); 130ccdfe979SStefano Zampini if (cusparsestruct->handle) cusparsestruct->handle = 0; 131b06137fdSPaul Mullowney PetscFunctionReturn(0); 132b06137fdSPaul Mullowney } 133b06137fdSPaul Mullowney 134ea799195SBarry Smith PetscErrorCode MatFactorGetSolverType_seqaij_cusparse(Mat A,MatSolverType *type) 1359ae82921SPaul Mullowney { 1369ae82921SPaul Mullowney PetscFunctionBegin; 1379ae82921SPaul Mullowney *type = MATSOLVERCUSPARSE; 1389ae82921SPaul Mullowney PetscFunctionReturn(0); 1399ae82921SPaul Mullowney } 1409ae82921SPaul Mullowney 141c708e6cdSJed Brown /*MC 142087f3262SPaul Mullowney MATSOLVERCUSPARSE = "cusparse" - A matrix type providing triangular solvers for seq matrices 143087f3262SPaul Mullowney on a single GPU of type, seqaijcusparse, aijcusparse, or seqaijcusp, aijcusp. Currently supported 144087f3262SPaul Mullowney algorithms are ILU(k) and ICC(k). Typically, deeper factorizations (larger k) results in poorer 145087f3262SPaul Mullowney performance in the triangular solves. Full LU, and Cholesky decompositions can be solved through the 146087f3262SPaul Mullowney CUSPARSE triangular solve algorithm. However, the performance can be quite poor and thus these 147087f3262SPaul Mullowney algorithms are not recommended. This class does NOT support direct solver operations. 148c708e6cdSJed Brown 1499ae82921SPaul Mullowney Level: beginner 150c708e6cdSJed Brown 1513ca39a21SBarry Smith .seealso: PCFactorSetMatSolverType(), MatSolverType, MatCreateSeqAIJCUSPARSE(), MATAIJCUSPARSE, MatCreateAIJCUSPARSE(), MatCUSPARSESetFormat(), MatCUSPARSEStorageFormat, MatCUSPARSEFormatOperation 152c708e6cdSJed Brown M*/ 1539ae82921SPaul Mullowney 15442c9c57cSBarry Smith PETSC_EXTERN PetscErrorCode MatGetFactor_seqaijcusparse_cusparse(Mat A,MatFactorType ftype,Mat *B) 1559ae82921SPaul Mullowney { 1569ae82921SPaul Mullowney PetscErrorCode ierr; 157bc3f50f2SPaul Mullowney PetscInt n = A->rmap->n; 1589ae82921SPaul Mullowney 1599ae82921SPaul Mullowney PetscFunctionBegin; 160bc3f50f2SPaul Mullowney ierr = MatCreate(PetscObjectComm((PetscObject)A),B);CHKERRQ(ierr); 161bc3f50f2SPaul Mullowney ierr = MatSetSizes(*B,n,n,n,n);CHKERRQ(ierr); 1622c7c0729SBarry Smith (*B)->factortype = ftype; 1639ae82921SPaul Mullowney ierr = MatSetType(*B,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 1642205254eSKarl Rupp 165087f3262SPaul Mullowney if (ftype == MAT_FACTOR_LU || ftype == MAT_FACTOR_ILU || ftype == MAT_FACTOR_ILUDT) { 16633d57670SJed Brown ierr = MatSetBlockSizesFromMats(*B,A,A);CHKERRQ(ierr); 1679ae82921SPaul Mullowney (*B)->ops->ilufactorsymbolic = MatILUFactorSymbolic_SeqAIJCUSPARSE; 1689ae82921SPaul Mullowney (*B)->ops->lufactorsymbolic = MatLUFactorSymbolic_SeqAIJCUSPARSE; 1694ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGND,(char**)&(*B)->preferredordering[MAT_FACTOR_LU]);CHKERRQ(ierr); 1704ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGNATURAL,(char**)&(*B)->preferredordering[MAT_FACTOR_ILU]);CHKERRQ(ierr); 1714ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGNATURAL,(char**)&(*B)->preferredordering[MAT_FACTOR_ILUDT]);CHKERRQ(ierr); 172087f3262SPaul Mullowney } else if (ftype == MAT_FACTOR_CHOLESKY || ftype == MAT_FACTOR_ICC) { 173087f3262SPaul Mullowney (*B)->ops->iccfactorsymbolic = MatICCFactorSymbolic_SeqAIJCUSPARSE; 174087f3262SPaul Mullowney (*B)->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SeqAIJCUSPARSE; 1754ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGND,(char**)&(*B)->preferredordering[MAT_FACTOR_CHOLESKY]);CHKERRQ(ierr); 1764ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGNATURAL,(char**)&(*B)->preferredordering[MAT_FACTOR_ICC]);CHKERRQ(ierr); 1779ae82921SPaul Mullowney } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Factor type not supported for CUSPARSE Matrix Types"); 178bc3f50f2SPaul Mullowney 179fa03d054SJed Brown ierr = MatSeqAIJSetPreallocation(*B,MAT_SKIP_ALLOCATION,NULL);CHKERRQ(ierr); 1804ac6704cSBarry Smith (*B)->canuseordering = PETSC_TRUE; 1813ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)(*B),"MatFactorGetSolverType_C",MatFactorGetSolverType_seqaij_cusparse);CHKERRQ(ierr); 1829ae82921SPaul Mullowney PetscFunctionReturn(0); 1839ae82921SPaul Mullowney } 1849ae82921SPaul Mullowney 185bc3f50f2SPaul Mullowney PETSC_INTERN PetscErrorCode MatCUSPARSESetFormat_SeqAIJCUSPARSE(Mat A,MatCUSPARSEFormatOperation op,MatCUSPARSEStorageFormat format) 186ca45077fSPaul Mullowney { 187aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 1886e111a19SKarl Rupp 189ca45077fSPaul Mullowney PetscFunctionBegin; 190ca45077fSPaul Mullowney switch (op) { 191e057df02SPaul Mullowney case MAT_CUSPARSE_MULT: 192aa372e3fSPaul Mullowney cusparsestruct->format = format; 193ca45077fSPaul Mullowney break; 194e057df02SPaul Mullowney case MAT_CUSPARSE_ALL: 195aa372e3fSPaul Mullowney cusparsestruct->format = format; 196ca45077fSPaul Mullowney break; 197ca45077fSPaul Mullowney default: 19836d62e41SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"unsupported operation %d for MatCUSPARSEFormatOperation. MAT_CUSPARSE_MULT and MAT_CUSPARSE_ALL are currently supported.",op); 199ca45077fSPaul Mullowney } 200ca45077fSPaul Mullowney PetscFunctionReturn(0); 201ca45077fSPaul Mullowney } 2029ae82921SPaul Mullowney 203e057df02SPaul Mullowney /*@ 204e057df02SPaul Mullowney MatCUSPARSESetFormat - Sets the storage format of CUSPARSE matrices for a particular 205e057df02SPaul Mullowney operation. Only the MatMult operation can use different GPU storage formats 206aa372e3fSPaul Mullowney for MPIAIJCUSPARSE matrices. 207e057df02SPaul Mullowney Not Collective 208e057df02SPaul Mullowney 209e057df02SPaul Mullowney Input Parameters: 2108468deeeSKarl Rupp + A - Matrix of type SEQAIJCUSPARSE 21136d62e41SPaul Mullowney . op - MatCUSPARSEFormatOperation. SEQAIJCUSPARSE matrices support MAT_CUSPARSE_MULT and MAT_CUSPARSE_ALL. MPIAIJCUSPARSE matrices support MAT_CUSPARSE_MULT_DIAG, MAT_CUSPARSE_MULT_OFFDIAG, and MAT_CUSPARSE_ALL. 2122692e278SPaul Mullowney - format - MatCUSPARSEStorageFormat (one of MAT_CUSPARSE_CSR, MAT_CUSPARSE_ELL, MAT_CUSPARSE_HYB. The latter two require CUDA 4.2) 213e057df02SPaul Mullowney 214e057df02SPaul Mullowney Output Parameter: 215e057df02SPaul Mullowney 216e057df02SPaul Mullowney Level: intermediate 217e057df02SPaul Mullowney 2188468deeeSKarl Rupp .seealso: MatCUSPARSEStorageFormat, MatCUSPARSEFormatOperation 219e057df02SPaul Mullowney @*/ 220e057df02SPaul Mullowney PetscErrorCode MatCUSPARSESetFormat(Mat A,MatCUSPARSEFormatOperation op,MatCUSPARSEStorageFormat format) 221e057df02SPaul Mullowney { 222e057df02SPaul Mullowney PetscErrorCode ierr; 2236e111a19SKarl Rupp 224e057df02SPaul Mullowney PetscFunctionBegin; 225e057df02SPaul Mullowney PetscValidHeaderSpecific(A, MAT_CLASSID,1); 226e057df02SPaul Mullowney ierr = PetscTryMethod(A,"MatCUSPARSESetFormat_C",(Mat,MatCUSPARSEFormatOperation,MatCUSPARSEStorageFormat),(A,op,format));CHKERRQ(ierr); 227e057df02SPaul Mullowney PetscFunctionReturn(0); 228e057df02SPaul Mullowney } 229e057df02SPaul Mullowney 2301a2c6b5cSJunchao Zhang PetscErrorCode MatSetOption_SeqAIJCUSPARSE(Mat A,MatOption op,PetscBool flg) 231e6e9a74fSStefano Zampini { 232e6e9a74fSStefano Zampini PetscErrorCode ierr; 233e6e9a74fSStefano Zampini 234e6e9a74fSStefano Zampini PetscFunctionBegin; 2351a2c6b5cSJunchao Zhang switch (op) { 2361a2c6b5cSJunchao Zhang case MAT_FORM_EXPLICIT_TRANSPOSE: 2371a2c6b5cSJunchao Zhang /* need to destroy the transpose matrix if present to prevent from logic errors if flg is set to true later */ 2381a2c6b5cSJunchao Zhang if (A->form_explicit_transpose && !flg) {ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr);} 2391a2c6b5cSJunchao Zhang A->form_explicit_transpose = flg; 2401a2c6b5cSJunchao Zhang break; 2411a2c6b5cSJunchao Zhang default: 2421a2c6b5cSJunchao Zhang ierr = MatSetOption_SeqAIJ(A,op,flg);CHKERRQ(ierr); 2431a2c6b5cSJunchao Zhang break; 244e6e9a74fSStefano Zampini } 245e6e9a74fSStefano Zampini PetscFunctionReturn(0); 246e6e9a74fSStefano Zampini } 247e6e9a74fSStefano Zampini 248bddcd29dSMark Adams static PetscErrorCode MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(Mat A); 249bddcd29dSMark Adams 250bddcd29dSMark Adams static PetscErrorCode MatLUFactorNumeric_SeqAIJCUSPARSE(Mat B,Mat A,const MatFactorInfo *info) 251bddcd29dSMark Adams { 252bddcd29dSMark Adams Mat_SeqAIJ *b = (Mat_SeqAIJ*)B->data; 253bddcd29dSMark Adams IS isrow = b->row,iscol = b->col; 254bddcd29dSMark Adams PetscBool row_identity,col_identity; 255bddcd29dSMark Adams PetscErrorCode ierr; 256bddcd29dSMark Adams 257bddcd29dSMark Adams PetscFunctionBegin; 258bddcd29dSMark Adams ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 259bddcd29dSMark Adams ierr = MatLUFactorNumeric_SeqAIJ(B,A,info);CHKERRQ(ierr); 260bddcd29dSMark Adams B->offloadmask = PETSC_OFFLOAD_CPU; 261bddcd29dSMark Adams /* determine which version of MatSolve needs to be used. */ 262bddcd29dSMark Adams ierr = ISIdentity(isrow,&row_identity);CHKERRQ(ierr); 263bddcd29dSMark Adams ierr = ISIdentity(iscol,&col_identity);CHKERRQ(ierr); 264bddcd29dSMark Adams if (row_identity && col_identity) { 265bddcd29dSMark Adams B->ops->solve = MatSolve_SeqAIJCUSPARSE_NaturalOrdering; 266bddcd29dSMark Adams B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering; 267bddcd29dSMark Adams B->ops->matsolve = NULL; 268bddcd29dSMark Adams B->ops->matsolvetranspose = NULL; 269bddcd29dSMark Adams } else { 270bddcd29dSMark Adams B->ops->solve = MatSolve_SeqAIJCUSPARSE; 271bddcd29dSMark Adams B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE; 272bddcd29dSMark Adams B->ops->matsolve = NULL; 273bddcd29dSMark Adams B->ops->matsolvetranspose = NULL; 274bddcd29dSMark Adams } 275bddcd29dSMark Adams 276bddcd29dSMark Adams /* get the triangular factors */ 277bddcd29dSMark Adams ierr = MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(B);CHKERRQ(ierr); 278bddcd29dSMark Adams PetscFunctionReturn(0); 279bddcd29dSMark Adams } 280bddcd29dSMark Adams 2814416b707SBarry Smith static PetscErrorCode MatSetFromOptions_SeqAIJCUSPARSE(PetscOptionItems *PetscOptionsObject,Mat A) 2829ae82921SPaul Mullowney { 2839ae82921SPaul Mullowney PetscErrorCode ierr; 284e057df02SPaul Mullowney MatCUSPARSEStorageFormat format; 2859ae82921SPaul Mullowney PetscBool flg; 286a183c035SDominic Meiser Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 2876e111a19SKarl Rupp 2889ae82921SPaul Mullowney PetscFunctionBegin; 289e55864a3SBarry Smith ierr = PetscOptionsHead(PetscOptionsObject,"SeqAIJCUSPARSE options");CHKERRQ(ierr); 2909ae82921SPaul Mullowney if (A->factortype == MAT_FACTOR_NONE) { 291e057df02SPaul Mullowney ierr = PetscOptionsEnum("-mat_cusparse_mult_storage_format","sets storage format of (seq)aijcusparse gpu matrices for SpMV", 292a183c035SDominic Meiser "MatCUSPARSESetFormat",MatCUSPARSEStorageFormats,(PetscEnum)cusparsestruct->format,(PetscEnum*)&format,&flg);CHKERRQ(ierr); 293afb2bd1cSJunchao Zhang if (flg) {ierr = MatCUSPARSESetFormat(A,MAT_CUSPARSE_MULT,format);CHKERRQ(ierr);} 294afb2bd1cSJunchao Zhang 2954c87dfd4SPaul Mullowney ierr = PetscOptionsEnum("-mat_cusparse_storage_format","sets storage format of (seq)aijcusparse gpu matrices for SpMV and TriSolve", 296a183c035SDominic Meiser "MatCUSPARSESetFormat",MatCUSPARSEStorageFormats,(PetscEnum)cusparsestruct->format,(PetscEnum*)&format,&flg);CHKERRQ(ierr); 297afb2bd1cSJunchao Zhang if (flg) {ierr = MatCUSPARSESetFormat(A,MAT_CUSPARSE_ALL,format);CHKERRQ(ierr);} 298afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 299afb2bd1cSJunchao Zhang ierr = PetscOptionsEnum("-mat_cusparse_spmv_alg","sets cuSPARSE algorithm used in sparse-mat dense-vector multiplication (SpMV)", 300afb2bd1cSJunchao Zhang "cusparseSpMVAlg_t",MatCUSPARSESpMVAlgorithms,(PetscEnum)cusparsestruct->spmvAlg,(PetscEnum*)&cusparsestruct->spmvAlg,&flg);CHKERRQ(ierr); 301afb2bd1cSJunchao Zhang /* If user did use this option, check its consistency with cuSPARSE, since PetscOptionsEnum() sets enum values based on their position in MatCUSPARSESpMVAlgorithms[] */ 302a435da06SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,4,0) 303a435da06SStefano Zampini if (flg && CUSPARSE_SPMV_CSR_ALG1 != 2) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseSpMVAlg_t has been changed but PETSc has not been updated accordingly"); 304a435da06SStefano Zampini #else 305afb2bd1cSJunchao Zhang if (flg && CUSPARSE_CSRMV_ALG1 != 2) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseSpMVAlg_t has been changed but PETSc has not been updated accordingly"); 306a435da06SStefano Zampini #endif 307afb2bd1cSJunchao Zhang ierr = PetscOptionsEnum("-mat_cusparse_spmm_alg","sets cuSPARSE algorithm used in sparse-mat dense-mat multiplication (SpMM)", 308afb2bd1cSJunchao Zhang "cusparseSpMMAlg_t",MatCUSPARSESpMMAlgorithms,(PetscEnum)cusparsestruct->spmmAlg,(PetscEnum*)&cusparsestruct->spmmAlg,&flg);CHKERRQ(ierr); 309afb2bd1cSJunchao Zhang if (flg && CUSPARSE_SPMM_CSR_ALG1 != 4) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseSpMMAlg_t has been changed but PETSc has not been updated accordingly"); 310afb2bd1cSJunchao Zhang 311afb2bd1cSJunchao Zhang ierr = PetscOptionsEnum("-mat_cusparse_csr2csc_alg","sets cuSPARSE algorithm used in converting CSR matrices to CSC matrices", 312afb2bd1cSJunchao Zhang "cusparseCsr2CscAlg_t",MatCUSPARSECsr2CscAlgorithms,(PetscEnum)cusparsestruct->csr2cscAlg,(PetscEnum*)&cusparsestruct->csr2cscAlg,&flg);CHKERRQ(ierr); 313afb2bd1cSJunchao Zhang if (flg && CUSPARSE_CSR2CSC_ALG1 != 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseCsr2CscAlg_t has been changed but PETSc has not been updated accordingly"); 314afb2bd1cSJunchao Zhang #endif 3154c87dfd4SPaul Mullowney } 3160af67c1bSStefano Zampini ierr = PetscOptionsTail();CHKERRQ(ierr); 3179ae82921SPaul Mullowney PetscFunctionReturn(0); 3189ae82921SPaul Mullowney } 3199ae82921SPaul Mullowney 3206fa9248bSJed Brown static PetscErrorCode MatILUFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS isrow,IS iscol,const MatFactorInfo *info) 3219ae82921SPaul Mullowney { 322da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 3239ae82921SPaul Mullowney PetscErrorCode ierr; 3249ae82921SPaul Mullowney 3259ae82921SPaul Mullowney PetscFunctionBegin; 326da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 3279ae82921SPaul Mullowney ierr = MatILUFactorSymbolic_SeqAIJ(B,A,isrow,iscol,info);CHKERRQ(ierr); 3289ae82921SPaul Mullowney B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJCUSPARSE; 3299ae82921SPaul Mullowney PetscFunctionReturn(0); 3309ae82921SPaul Mullowney } 3319ae82921SPaul Mullowney 3326fa9248bSJed Brown static PetscErrorCode MatLUFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS isrow,IS iscol,const MatFactorInfo *info) 3339ae82921SPaul Mullowney { 334da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 3359ae82921SPaul Mullowney PetscErrorCode ierr; 3369ae82921SPaul Mullowney 3379ae82921SPaul Mullowney PetscFunctionBegin; 338da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 3399ae82921SPaul Mullowney ierr = MatLUFactorSymbolic_SeqAIJ(B,A,isrow,iscol,info);CHKERRQ(ierr); 3409ae82921SPaul Mullowney B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJCUSPARSE; 3419ae82921SPaul Mullowney PetscFunctionReturn(0); 3429ae82921SPaul Mullowney } 3439ae82921SPaul Mullowney 344087f3262SPaul Mullowney static PetscErrorCode MatICCFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS perm,const MatFactorInfo *info) 345087f3262SPaul Mullowney { 346da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 347087f3262SPaul Mullowney PetscErrorCode ierr; 348087f3262SPaul Mullowney 349087f3262SPaul Mullowney PetscFunctionBegin; 350da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 351087f3262SPaul Mullowney ierr = MatICCFactorSymbolic_SeqAIJ(B,A,perm,info);CHKERRQ(ierr); 352087f3262SPaul Mullowney B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJCUSPARSE; 353087f3262SPaul Mullowney PetscFunctionReturn(0); 354087f3262SPaul Mullowney } 355087f3262SPaul Mullowney 356087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS perm,const MatFactorInfo *info) 357087f3262SPaul Mullowney { 358da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 359087f3262SPaul Mullowney PetscErrorCode ierr; 360087f3262SPaul Mullowney 361087f3262SPaul Mullowney PetscFunctionBegin; 362da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 363087f3262SPaul Mullowney ierr = MatCholeskyFactorSymbolic_SeqAIJ(B,A,perm,info);CHKERRQ(ierr); 364087f3262SPaul Mullowney B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJCUSPARSE; 365087f3262SPaul Mullowney PetscFunctionReturn(0); 366087f3262SPaul Mullowney } 367087f3262SPaul Mullowney 368087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEBuildILULowerTriMatrix(Mat A) 3699ae82921SPaul Mullowney { 3709ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 3719ae82921SPaul Mullowney PetscInt n = A->rmap->n; 3729ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 373aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 3749ae82921SPaul Mullowney cusparseStatus_t stat; 3759ae82921SPaul Mullowney const PetscInt *ai = a->i,*aj = a->j,*vi; 3769ae82921SPaul Mullowney const MatScalar *aa = a->a,*v; 3779ae82921SPaul Mullowney PetscInt *AiLo, *AjLo; 3789ae82921SPaul Mullowney PetscInt i,nz, nzLower, offset, rowOffset; 379b175d8bbSPaul Mullowney PetscErrorCode ierr; 38057d48284SJunchao Zhang cudaError_t cerr; 3819ae82921SPaul Mullowney 3829ae82921SPaul Mullowney PetscFunctionBegin; 383cf00fe3bSKarl Rupp if (!n) PetscFunctionReturn(0); 384c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 3859ae82921SPaul Mullowney try { 3869ae82921SPaul Mullowney /* first figure out the number of nonzeros in the lower triangular matrix including 1's on the diagonal. */ 3879ae82921SPaul Mullowney nzLower=n+ai[n]-ai[1]; 388da79fbbcSStefano Zampini if (!loTriFactor) { 3892cbc15d9SMark PetscScalar *AALo; 3902cbc15d9SMark 3912cbc15d9SMark cerr = cudaMallocHost((void**) &AALo, nzLower*sizeof(PetscScalar));CHKERRCUDA(cerr); 3929ae82921SPaul Mullowney 3939ae82921SPaul Mullowney /* Allocate Space for the lower triangular matrix */ 39457d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AiLo, (n+1)*sizeof(PetscInt));CHKERRCUDA(cerr); 39557d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AjLo, nzLower*sizeof(PetscInt));CHKERRCUDA(cerr); 3969ae82921SPaul Mullowney 3979ae82921SPaul Mullowney /* Fill the lower triangular matrix */ 3989ae82921SPaul Mullowney AiLo[0] = (PetscInt) 0; 3999ae82921SPaul Mullowney AiLo[n] = nzLower; 4009ae82921SPaul Mullowney AjLo[0] = (PetscInt) 0; 4019ae82921SPaul Mullowney AALo[0] = (MatScalar) 1.0; 4029ae82921SPaul Mullowney v = aa; 4039ae82921SPaul Mullowney vi = aj; 4049ae82921SPaul Mullowney offset = 1; 4059ae82921SPaul Mullowney rowOffset= 1; 4069ae82921SPaul Mullowney for (i=1; i<n; i++) { 4079ae82921SPaul Mullowney nz = ai[i+1] - ai[i]; 408e057df02SPaul Mullowney /* additional 1 for the term on the diagonal */ 4099ae82921SPaul Mullowney AiLo[i] = rowOffset; 4109ae82921SPaul Mullowney rowOffset += nz+1; 4119ae82921SPaul Mullowney 412580bdb30SBarry Smith ierr = PetscArraycpy(&(AjLo[offset]), vi, nz);CHKERRQ(ierr); 413580bdb30SBarry Smith ierr = PetscArraycpy(&(AALo[offset]), v, nz);CHKERRQ(ierr); 4149ae82921SPaul Mullowney 4159ae82921SPaul Mullowney offset += nz; 4169ae82921SPaul Mullowney AjLo[offset] = (PetscInt) i; 4179ae82921SPaul Mullowney AALo[offset] = (MatScalar) 1.0; 4189ae82921SPaul Mullowney offset += 1; 4199ae82921SPaul Mullowney 4209ae82921SPaul Mullowney v += nz; 4219ae82921SPaul Mullowney vi += nz; 4229ae82921SPaul Mullowney } 4232205254eSKarl Rupp 424aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 425da79fbbcSStefano Zampini ierr = PetscNew(&loTriFactor);CHKERRQ(ierr); 426da79fbbcSStefano Zampini loTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 427aa372e3fSPaul Mullowney /* Create the matrix description */ 42857d48284SJunchao Zhang stat = cusparseCreateMatDescr(&loTriFactor->descr);CHKERRCUSPARSE(stat); 42957d48284SJunchao Zhang stat = cusparseSetMatIndexBase(loTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 4301b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 431afb2bd1cSJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 432afb2bd1cSJunchao Zhang #else 43357d48284SJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 434afb2bd1cSJunchao Zhang #endif 43557d48284SJunchao Zhang stat = cusparseSetMatFillMode(loTriFactor->descr, CUSPARSE_FILL_MODE_LOWER);CHKERRCUSPARSE(stat); 43657d48284SJunchao Zhang stat = cusparseSetMatDiagType(loTriFactor->descr, CUSPARSE_DIAG_TYPE_UNIT);CHKERRCUSPARSE(stat); 437aa372e3fSPaul Mullowney 438aa372e3fSPaul Mullowney /* set the operation */ 439aa372e3fSPaul Mullowney loTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 440aa372e3fSPaul Mullowney 441aa372e3fSPaul Mullowney /* set the matrix */ 442aa372e3fSPaul Mullowney loTriFactor->csrMat = new CsrMatrix; 443aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows = n; 444aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols = n; 445aa372e3fSPaul Mullowney loTriFactor->csrMat->num_entries = nzLower; 446aa372e3fSPaul Mullowney 447aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(n+1); 448aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->assign(AiLo, AiLo+n+1); 449aa372e3fSPaul Mullowney 450aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(nzLower); 451aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->assign(AjLo, AjLo+nzLower); 452aa372e3fSPaul Mullowney 453aa372e3fSPaul Mullowney loTriFactor->csrMat->values = new THRUSTARRAY(nzLower); 454aa372e3fSPaul Mullowney loTriFactor->csrMat->values->assign(AALo, AALo+nzLower); 455aa372e3fSPaul Mullowney 456afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 457da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 458afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&loTriFactor->solveInfo);CHKERRCUSPARSE(stat); 4591b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 460afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, loTriFactor->solveOp, 461afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 462afb2bd1cSJunchao Zhang loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 463afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo, 464afb2bd1cSJunchao Zhang &loTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 465afb2bd1cSJunchao Zhang cerr = cudaMalloc(&loTriFactor->solveBuffer,loTriFactor->solveBufferSize);CHKERRCUDA(cerr); 466afb2bd1cSJunchao Zhang #endif 467afb2bd1cSJunchao Zhang 468aa372e3fSPaul Mullowney /* perform the solve analysis */ 469aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, loTriFactor->solveOp, 470aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 471aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 472d49cd2b7SBarry Smith loTriFactor->csrMat->column_indices->data().get(), 4731b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 474d49cd2b7SBarry Smith loTriFactor->solveInfo, 475d49cd2b7SBarry Smith loTriFactor->solvePolicy, loTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 476d49cd2b7SBarry Smith #else 477d49cd2b7SBarry Smith loTriFactor->solveInfo);CHKERRCUSPARSE(stat); 478afb2bd1cSJunchao Zhang #endif 479da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 480da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 481aa372e3fSPaul Mullowney 482da79fbbcSStefano Zampini /* assign the pointer */ 483aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->loTriFactorPtr = loTriFactor; 4842cbc15d9SMark loTriFactor->AA_h = AALo; 48557d48284SJunchao Zhang cerr = cudaFreeHost(AiLo);CHKERRCUDA(cerr); 48657d48284SJunchao Zhang cerr = cudaFreeHost(AjLo);CHKERRCUDA(cerr); 4874863603aSSatish Balay ierr = PetscLogCpuToGpu((n+1+nzLower)*sizeof(int)+nzLower*sizeof(PetscScalar));CHKERRQ(ierr); 488da79fbbcSStefano Zampini } else { /* update values only */ 4892cbc15d9SMark if (!loTriFactor->AA_h) { 4902cbc15d9SMark cerr = cudaMallocHost((void**) &loTriFactor->AA_h, nzLower*sizeof(PetscScalar));CHKERRCUDA(cerr); 4912cbc15d9SMark } 492da79fbbcSStefano Zampini /* Fill the lower triangular matrix */ 4932cbc15d9SMark loTriFactor->AA_h[0] = 1.0; 494da79fbbcSStefano Zampini v = aa; 495da79fbbcSStefano Zampini vi = aj; 496da79fbbcSStefano Zampini offset = 1; 497da79fbbcSStefano Zampini for (i=1; i<n; i++) { 498da79fbbcSStefano Zampini nz = ai[i+1] - ai[i]; 4992cbc15d9SMark ierr = PetscArraycpy(&(loTriFactor->AA_h[offset]), v, nz);CHKERRQ(ierr); 500da79fbbcSStefano Zampini offset += nz; 5012cbc15d9SMark loTriFactor->AA_h[offset] = 1.0; 502da79fbbcSStefano Zampini offset += 1; 503da79fbbcSStefano Zampini v += nz; 504da79fbbcSStefano Zampini } 5052cbc15d9SMark loTriFactor->csrMat->values->assign(loTriFactor->AA_h, loTriFactor->AA_h+nzLower); 506da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(nzLower*sizeof(PetscScalar));CHKERRQ(ierr); 507da79fbbcSStefano Zampini } 5089ae82921SPaul Mullowney } catch(char *ex) { 5099ae82921SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 5109ae82921SPaul Mullowney } 5119ae82921SPaul Mullowney } 5129ae82921SPaul Mullowney PetscFunctionReturn(0); 5139ae82921SPaul Mullowney } 5149ae82921SPaul Mullowney 515087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEBuildILUUpperTriMatrix(Mat A) 5169ae82921SPaul Mullowney { 5179ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 5189ae82921SPaul Mullowney PetscInt n = A->rmap->n; 5199ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 520aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 5219ae82921SPaul Mullowney cusparseStatus_t stat; 5229ae82921SPaul Mullowney const PetscInt *aj = a->j,*adiag = a->diag,*vi; 5239ae82921SPaul Mullowney const MatScalar *aa = a->a,*v; 5249ae82921SPaul Mullowney PetscInt *AiUp, *AjUp; 5259ae82921SPaul Mullowney PetscInt i,nz, nzUpper, offset; 5269ae82921SPaul Mullowney PetscErrorCode ierr; 52757d48284SJunchao Zhang cudaError_t cerr; 5289ae82921SPaul Mullowney 5299ae82921SPaul Mullowney PetscFunctionBegin; 530cf00fe3bSKarl Rupp if (!n) PetscFunctionReturn(0); 531c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 5329ae82921SPaul Mullowney try { 5339ae82921SPaul Mullowney /* next, figure out the number of nonzeros in the upper triangular matrix. */ 5349ae82921SPaul Mullowney nzUpper = adiag[0]-adiag[n]; 535da79fbbcSStefano Zampini if (!upTriFactor) { 5362cbc15d9SMark PetscScalar *AAUp; 5372cbc15d9SMark 5382cbc15d9SMark cerr = cudaMallocHost((void**) &AAUp, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 5392cbc15d9SMark 5409ae82921SPaul Mullowney /* Allocate Space for the upper triangular matrix */ 54157d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AiUp, (n+1)*sizeof(PetscInt));CHKERRCUDA(cerr); 54257d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AjUp, nzUpper*sizeof(PetscInt));CHKERRCUDA(cerr); 5439ae82921SPaul Mullowney 5449ae82921SPaul Mullowney /* Fill the upper triangular matrix */ 5459ae82921SPaul Mullowney AiUp[0]=(PetscInt) 0; 5469ae82921SPaul Mullowney AiUp[n]=nzUpper; 5479ae82921SPaul Mullowney offset = nzUpper; 5489ae82921SPaul Mullowney for (i=n-1; i>=0; i--) { 5499ae82921SPaul Mullowney v = aa + adiag[i+1] + 1; 5509ae82921SPaul Mullowney vi = aj + adiag[i+1] + 1; 5519ae82921SPaul Mullowney 552e057df02SPaul Mullowney /* number of elements NOT on the diagonal */ 5539ae82921SPaul Mullowney nz = adiag[i] - adiag[i+1]-1; 5549ae82921SPaul Mullowney 555e057df02SPaul Mullowney /* decrement the offset */ 5569ae82921SPaul Mullowney offset -= (nz+1); 5579ae82921SPaul Mullowney 558e057df02SPaul Mullowney /* first, set the diagonal elements */ 5599ae82921SPaul Mullowney AjUp[offset] = (PetscInt) i; 56009f51544SAlejandro Lamas Daviña AAUp[offset] = (MatScalar)1./v[nz]; 5619ae82921SPaul Mullowney AiUp[i] = AiUp[i+1] - (nz+1); 5629ae82921SPaul Mullowney 563580bdb30SBarry Smith ierr = PetscArraycpy(&(AjUp[offset+1]), vi, nz);CHKERRQ(ierr); 564580bdb30SBarry Smith ierr = PetscArraycpy(&(AAUp[offset+1]), v, nz);CHKERRQ(ierr); 5659ae82921SPaul Mullowney } 5662205254eSKarl Rupp 567aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 568da79fbbcSStefano Zampini ierr = PetscNew(&upTriFactor);CHKERRQ(ierr); 569da79fbbcSStefano Zampini upTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 5702205254eSKarl Rupp 571aa372e3fSPaul Mullowney /* Create the matrix description */ 57257d48284SJunchao Zhang stat = cusparseCreateMatDescr(&upTriFactor->descr);CHKERRCUSPARSE(stat); 57357d48284SJunchao Zhang stat = cusparseSetMatIndexBase(upTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 5741b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 575afb2bd1cSJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 576afb2bd1cSJunchao Zhang #else 57757d48284SJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 578afb2bd1cSJunchao Zhang #endif 57957d48284SJunchao Zhang stat = cusparseSetMatFillMode(upTriFactor->descr, CUSPARSE_FILL_MODE_UPPER);CHKERRCUSPARSE(stat); 58057d48284SJunchao Zhang stat = cusparseSetMatDiagType(upTriFactor->descr, CUSPARSE_DIAG_TYPE_NON_UNIT);CHKERRCUSPARSE(stat); 581aa372e3fSPaul Mullowney 582aa372e3fSPaul Mullowney /* set the operation */ 583aa372e3fSPaul Mullowney upTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 584aa372e3fSPaul Mullowney 585aa372e3fSPaul Mullowney /* set the matrix */ 586aa372e3fSPaul Mullowney upTriFactor->csrMat = new CsrMatrix; 587aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows = n; 588aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols = n; 589aa372e3fSPaul Mullowney upTriFactor->csrMat->num_entries = nzUpper; 590aa372e3fSPaul Mullowney 591aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(n+1); 592aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->assign(AiUp, AiUp+n+1); 593aa372e3fSPaul Mullowney 594aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(nzUpper); 595aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->assign(AjUp, AjUp+nzUpper); 596aa372e3fSPaul Mullowney 597aa372e3fSPaul Mullowney upTriFactor->csrMat->values = new THRUSTARRAY(nzUpper); 598aa372e3fSPaul Mullowney upTriFactor->csrMat->values->assign(AAUp, AAUp+nzUpper); 599aa372e3fSPaul Mullowney 600afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 601da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 602afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&upTriFactor->solveInfo);CHKERRCUSPARSE(stat); 6031b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 604afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, upTriFactor->solveOp, 605afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 606afb2bd1cSJunchao Zhang upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 607afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo, 608afb2bd1cSJunchao Zhang &upTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 609afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactor->solveBuffer,upTriFactor->solveBufferSize);CHKERRCUDA(cerr); 610afb2bd1cSJunchao Zhang #endif 611afb2bd1cSJunchao Zhang 612aa372e3fSPaul Mullowney /* perform the solve analysis */ 613aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, upTriFactor->solveOp, 614aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 615aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 616d49cd2b7SBarry Smith upTriFactor->csrMat->column_indices->data().get(), 6171b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 618d49cd2b7SBarry Smith upTriFactor->solveInfo, 619d49cd2b7SBarry Smith upTriFactor->solvePolicy, upTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 620d49cd2b7SBarry Smith #else 621d49cd2b7SBarry Smith upTriFactor->solveInfo);CHKERRCUSPARSE(stat); 622afb2bd1cSJunchao Zhang #endif 623da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 624da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 625aa372e3fSPaul Mullowney 626da79fbbcSStefano Zampini /* assign the pointer */ 627aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->upTriFactorPtr = upTriFactor; 6282cbc15d9SMark upTriFactor->AA_h = AAUp; 62957d48284SJunchao Zhang cerr = cudaFreeHost(AiUp);CHKERRCUDA(cerr); 63057d48284SJunchao Zhang cerr = cudaFreeHost(AjUp);CHKERRCUDA(cerr); 6314863603aSSatish Balay ierr = PetscLogCpuToGpu((n+1+nzUpper)*sizeof(int)+nzUpper*sizeof(PetscScalar));CHKERRQ(ierr); 632da79fbbcSStefano Zampini } else { 6332cbc15d9SMark if (!upTriFactor->AA_h) { 6342cbc15d9SMark cerr = cudaMallocHost((void**) &upTriFactor->AA_h, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 6352cbc15d9SMark } 636da79fbbcSStefano Zampini /* Fill the upper triangular matrix */ 637da79fbbcSStefano Zampini offset = nzUpper; 638da79fbbcSStefano Zampini for (i=n-1; i>=0; i--) { 639da79fbbcSStefano Zampini v = aa + adiag[i+1] + 1; 640da79fbbcSStefano Zampini 641da79fbbcSStefano Zampini /* number of elements NOT on the diagonal */ 642da79fbbcSStefano Zampini nz = adiag[i] - adiag[i+1]-1; 643da79fbbcSStefano Zampini 644da79fbbcSStefano Zampini /* decrement the offset */ 645da79fbbcSStefano Zampini offset -= (nz+1); 646da79fbbcSStefano Zampini 647da79fbbcSStefano Zampini /* first, set the diagonal elements */ 6482cbc15d9SMark upTriFactor->AA_h[offset] = 1./v[nz]; 6492cbc15d9SMark ierr = PetscArraycpy(&(upTriFactor->AA_h[offset+1]), v, nz);CHKERRQ(ierr); 650da79fbbcSStefano Zampini } 6512cbc15d9SMark upTriFactor->csrMat->values->assign(upTriFactor->AA_h, upTriFactor->AA_h+nzUpper); 652da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(nzUpper*sizeof(PetscScalar));CHKERRQ(ierr); 653da79fbbcSStefano Zampini } 6549ae82921SPaul Mullowney } catch(char *ex) { 6559ae82921SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 6569ae82921SPaul Mullowney } 6579ae82921SPaul Mullowney } 6589ae82921SPaul Mullowney PetscFunctionReturn(0); 6599ae82921SPaul Mullowney } 6609ae82921SPaul Mullowney 661087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(Mat A) 6629ae82921SPaul Mullowney { 6639ae82921SPaul Mullowney PetscErrorCode ierr; 6649ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 6659ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 6669ae82921SPaul Mullowney IS isrow = a->row,iscol = a->icol; 6679ae82921SPaul Mullowney PetscBool row_identity,col_identity; 6689ae82921SPaul Mullowney PetscInt n = A->rmap->n; 6699ae82921SPaul Mullowney 6709ae82921SPaul Mullowney PetscFunctionBegin; 671da79fbbcSStefano Zampini if (!cusparseTriFactors) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 672087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEBuildILULowerTriMatrix(A);CHKERRQ(ierr); 673087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEBuildILUUpperTriMatrix(A);CHKERRQ(ierr); 6742205254eSKarl Rupp 675da79fbbcSStefano Zampini if (!cusparseTriFactors->workVector) { cusparseTriFactors->workVector = new THRUSTARRAY(n); } 676aa372e3fSPaul Mullowney cusparseTriFactors->nnz=a->nz; 6779ae82921SPaul Mullowney 678c70f7ee4SJunchao Zhang A->offloadmask = PETSC_OFFLOAD_BOTH; 679e057df02SPaul Mullowney /* lower triangular indices */ 6809ae82921SPaul Mullowney ierr = ISIdentity(isrow,&row_identity);CHKERRQ(ierr); 681da79fbbcSStefano Zampini if (!row_identity && !cusparseTriFactors->rpermIndices) { 682da79fbbcSStefano Zampini const PetscInt *r; 683da79fbbcSStefano Zampini 684da79fbbcSStefano Zampini ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 685aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices = new THRUSTINTARRAY(n); 686aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices->assign(r, r+n); 6879ae82921SPaul Mullowney ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 688da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscInt));CHKERRQ(ierr); 689da79fbbcSStefano Zampini } 6909ae82921SPaul Mullowney 691e057df02SPaul Mullowney /* upper triangular indices */ 6929ae82921SPaul Mullowney ierr = ISIdentity(iscol,&col_identity);CHKERRQ(ierr); 693da79fbbcSStefano Zampini if (!col_identity && !cusparseTriFactors->cpermIndices) { 694da79fbbcSStefano Zampini const PetscInt *c; 695da79fbbcSStefano Zampini 696da79fbbcSStefano Zampini ierr = ISGetIndices(iscol,&c);CHKERRQ(ierr); 697aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices = new THRUSTINTARRAY(n); 698aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices->assign(c, c+n); 6999ae82921SPaul Mullowney ierr = ISRestoreIndices(iscol,&c);CHKERRQ(ierr); 700da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscInt));CHKERRQ(ierr); 701da79fbbcSStefano Zampini } 7029ae82921SPaul Mullowney PetscFunctionReturn(0); 7039ae82921SPaul Mullowney } 7049ae82921SPaul Mullowney 705087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEBuildICCTriMatrices(Mat A) 706087f3262SPaul Mullowney { 707087f3262SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 708087f3262SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 709aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 710aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 711087f3262SPaul Mullowney cusparseStatus_t stat; 712087f3262SPaul Mullowney PetscErrorCode ierr; 71357d48284SJunchao Zhang cudaError_t cerr; 714087f3262SPaul Mullowney PetscInt *AiUp, *AjUp; 715087f3262SPaul Mullowney PetscScalar *AAUp; 716087f3262SPaul Mullowney PetscScalar *AALo; 717087f3262SPaul Mullowney PetscInt nzUpper = a->nz,n = A->rmap->n,i,offset,nz,j; 718087f3262SPaul Mullowney Mat_SeqSBAIJ *b = (Mat_SeqSBAIJ*)A->data; 719087f3262SPaul Mullowney const PetscInt *ai = b->i,*aj = b->j,*vj; 720087f3262SPaul Mullowney const MatScalar *aa = b->a,*v; 721087f3262SPaul Mullowney 722087f3262SPaul Mullowney PetscFunctionBegin; 723cf00fe3bSKarl Rupp if (!n) PetscFunctionReturn(0); 724c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 725087f3262SPaul Mullowney try { 726da79fbbcSStefano Zampini cerr = cudaMallocHost((void**) &AAUp, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 727da79fbbcSStefano Zampini cerr = cudaMallocHost((void**) &AALo, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 728da79fbbcSStefano Zampini if (!upTriFactor && !loTriFactor) { 729087f3262SPaul Mullowney /* Allocate Space for the upper triangular matrix */ 73057d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AiUp, (n+1)*sizeof(PetscInt));CHKERRCUDA(cerr); 73157d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AjUp, nzUpper*sizeof(PetscInt));CHKERRCUDA(cerr); 732087f3262SPaul Mullowney 733087f3262SPaul Mullowney /* Fill the upper triangular matrix */ 734087f3262SPaul Mullowney AiUp[0]=(PetscInt) 0; 735087f3262SPaul Mullowney AiUp[n]=nzUpper; 736087f3262SPaul Mullowney offset = 0; 737087f3262SPaul Mullowney for (i=0; i<n; i++) { 738087f3262SPaul Mullowney /* set the pointers */ 739087f3262SPaul Mullowney v = aa + ai[i]; 740087f3262SPaul Mullowney vj = aj + ai[i]; 741087f3262SPaul Mullowney nz = ai[i+1] - ai[i] - 1; /* exclude diag[i] */ 742087f3262SPaul Mullowney 743087f3262SPaul Mullowney /* first, set the diagonal elements */ 744087f3262SPaul Mullowney AjUp[offset] = (PetscInt) i; 74509f51544SAlejandro Lamas Daviña AAUp[offset] = (MatScalar)1.0/v[nz]; 746087f3262SPaul Mullowney AiUp[i] = offset; 74709f51544SAlejandro Lamas Daviña AALo[offset] = (MatScalar)1.0/v[nz]; 748087f3262SPaul Mullowney 749087f3262SPaul Mullowney offset+=1; 750087f3262SPaul Mullowney if (nz>0) { 751f22e0265SBarry Smith ierr = PetscArraycpy(&(AjUp[offset]), vj, nz);CHKERRQ(ierr); 752580bdb30SBarry Smith ierr = PetscArraycpy(&(AAUp[offset]), v, nz);CHKERRQ(ierr); 753087f3262SPaul Mullowney for (j=offset; j<offset+nz; j++) { 754087f3262SPaul Mullowney AAUp[j] = -AAUp[j]; 755087f3262SPaul Mullowney AALo[j] = AAUp[j]/v[nz]; 756087f3262SPaul Mullowney } 757087f3262SPaul Mullowney offset+=nz; 758087f3262SPaul Mullowney } 759087f3262SPaul Mullowney } 760087f3262SPaul Mullowney 761aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 762da79fbbcSStefano Zampini ierr = PetscNew(&upTriFactor);CHKERRQ(ierr); 763da79fbbcSStefano Zampini upTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 764087f3262SPaul Mullowney 765aa372e3fSPaul Mullowney /* Create the matrix description */ 76657d48284SJunchao Zhang stat = cusparseCreateMatDescr(&upTriFactor->descr);CHKERRCUSPARSE(stat); 76757d48284SJunchao Zhang stat = cusparseSetMatIndexBase(upTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 7681b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 769afb2bd1cSJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 770afb2bd1cSJunchao Zhang #else 77157d48284SJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 772afb2bd1cSJunchao Zhang #endif 77357d48284SJunchao Zhang stat = cusparseSetMatFillMode(upTriFactor->descr, CUSPARSE_FILL_MODE_UPPER);CHKERRCUSPARSE(stat); 77457d48284SJunchao Zhang stat = cusparseSetMatDiagType(upTriFactor->descr, CUSPARSE_DIAG_TYPE_UNIT);CHKERRCUSPARSE(stat); 775087f3262SPaul Mullowney 776aa372e3fSPaul Mullowney /* set the matrix */ 777aa372e3fSPaul Mullowney upTriFactor->csrMat = new CsrMatrix; 778aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows = A->rmap->n; 779aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols = A->cmap->n; 780aa372e3fSPaul Mullowney upTriFactor->csrMat->num_entries = a->nz; 781aa372e3fSPaul Mullowney 782aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 783aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->assign(AiUp, AiUp+A->rmap->n+1); 784aa372e3fSPaul Mullowney 785aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(a->nz); 786aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->assign(AjUp, AjUp+a->nz); 787aa372e3fSPaul Mullowney 788aa372e3fSPaul Mullowney upTriFactor->csrMat->values = new THRUSTARRAY(a->nz); 789aa372e3fSPaul Mullowney upTriFactor->csrMat->values->assign(AAUp, AAUp+a->nz); 790aa372e3fSPaul Mullowney 791afb2bd1cSJunchao Zhang /* set the operation */ 792afb2bd1cSJunchao Zhang upTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 793afb2bd1cSJunchao Zhang 794afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 795da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 796afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&upTriFactor->solveInfo);CHKERRCUSPARSE(stat); 7971b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 798afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, upTriFactor->solveOp, 799afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 800afb2bd1cSJunchao Zhang upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 801afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo, 802afb2bd1cSJunchao Zhang &upTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 803afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactor->solveBuffer,upTriFactor->solveBufferSize);CHKERRCUDA(cerr); 804afb2bd1cSJunchao Zhang #endif 805afb2bd1cSJunchao Zhang 806aa372e3fSPaul Mullowney /* perform the solve analysis */ 807aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, upTriFactor->solveOp, 808aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 809aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 810d49cd2b7SBarry Smith upTriFactor->csrMat->column_indices->data().get(), 8111b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 812d49cd2b7SBarry Smith upTriFactor->solveInfo, 813d49cd2b7SBarry Smith upTriFactor->solvePolicy, upTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 814d49cd2b7SBarry Smith #else 815d49cd2b7SBarry Smith upTriFactor->solveInfo);CHKERRCUSPARSE(stat); 816afb2bd1cSJunchao Zhang #endif 817da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 818da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 819aa372e3fSPaul Mullowney 820da79fbbcSStefano Zampini /* assign the pointer */ 821aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->upTriFactorPtr = upTriFactor; 822aa372e3fSPaul Mullowney 823aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 824da79fbbcSStefano Zampini ierr = PetscNew(&loTriFactor);CHKERRQ(ierr); 825da79fbbcSStefano Zampini loTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 826aa372e3fSPaul Mullowney 827aa372e3fSPaul Mullowney /* Create the matrix description */ 82857d48284SJunchao Zhang stat = cusparseCreateMatDescr(&loTriFactor->descr);CHKERRCUSPARSE(stat); 82957d48284SJunchao Zhang stat = cusparseSetMatIndexBase(loTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 8301b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 831afb2bd1cSJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 832afb2bd1cSJunchao Zhang #else 83357d48284SJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 834afb2bd1cSJunchao Zhang #endif 83557d48284SJunchao Zhang stat = cusparseSetMatFillMode(loTriFactor->descr, CUSPARSE_FILL_MODE_UPPER);CHKERRCUSPARSE(stat); 83657d48284SJunchao Zhang stat = cusparseSetMatDiagType(loTriFactor->descr, CUSPARSE_DIAG_TYPE_NON_UNIT);CHKERRCUSPARSE(stat); 837aa372e3fSPaul Mullowney 838aa372e3fSPaul Mullowney /* set the operation */ 839aa372e3fSPaul Mullowney loTriFactor->solveOp = CUSPARSE_OPERATION_TRANSPOSE; 840aa372e3fSPaul Mullowney 841aa372e3fSPaul Mullowney /* set the matrix */ 842aa372e3fSPaul Mullowney loTriFactor->csrMat = new CsrMatrix; 843aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows = A->rmap->n; 844aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols = A->cmap->n; 845aa372e3fSPaul Mullowney loTriFactor->csrMat->num_entries = a->nz; 846aa372e3fSPaul Mullowney 847aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 848aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->assign(AiUp, AiUp+A->rmap->n+1); 849aa372e3fSPaul Mullowney 850aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(a->nz); 851aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->assign(AjUp, AjUp+a->nz); 852aa372e3fSPaul Mullowney 853aa372e3fSPaul Mullowney loTriFactor->csrMat->values = new THRUSTARRAY(a->nz); 854aa372e3fSPaul Mullowney loTriFactor->csrMat->values->assign(AALo, AALo+a->nz); 855aa372e3fSPaul Mullowney 856afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 857da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 858afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&loTriFactor->solveInfo);CHKERRCUSPARSE(stat); 8591b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 860afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, loTriFactor->solveOp, 861afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 862afb2bd1cSJunchao Zhang loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 863afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo, 864afb2bd1cSJunchao Zhang &loTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 865afb2bd1cSJunchao Zhang cerr = cudaMalloc(&loTriFactor->solveBuffer,loTriFactor->solveBufferSize);CHKERRCUDA(cerr); 866afb2bd1cSJunchao Zhang #endif 867afb2bd1cSJunchao Zhang 868aa372e3fSPaul Mullowney /* perform the solve analysis */ 869aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, loTriFactor->solveOp, 870aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 871aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 872d49cd2b7SBarry Smith loTriFactor->csrMat->column_indices->data().get(), 8731b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 874d49cd2b7SBarry Smith loTriFactor->solveInfo, 875d49cd2b7SBarry Smith loTriFactor->solvePolicy, loTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 876d49cd2b7SBarry Smith #else 877d49cd2b7SBarry Smith loTriFactor->solveInfo);CHKERRCUSPARSE(stat); 878afb2bd1cSJunchao Zhang #endif 879da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 880da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 881aa372e3fSPaul Mullowney 882da79fbbcSStefano Zampini /* assign the pointer */ 883aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->loTriFactorPtr = loTriFactor; 884087f3262SPaul Mullowney 885da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(2*(((A->rmap->n+1)+(a->nz))*sizeof(int)+(a->nz)*sizeof(PetscScalar)));CHKERRQ(ierr); 88657d48284SJunchao Zhang cerr = cudaFreeHost(AiUp);CHKERRCUDA(cerr); 88757d48284SJunchao Zhang cerr = cudaFreeHost(AjUp);CHKERRCUDA(cerr); 888da79fbbcSStefano Zampini } else { 889da79fbbcSStefano Zampini /* Fill the upper triangular matrix */ 890da79fbbcSStefano Zampini offset = 0; 891da79fbbcSStefano Zampini for (i=0; i<n; i++) { 892da79fbbcSStefano Zampini /* set the pointers */ 893da79fbbcSStefano Zampini v = aa + ai[i]; 894da79fbbcSStefano Zampini nz = ai[i+1] - ai[i] - 1; /* exclude diag[i] */ 895da79fbbcSStefano Zampini 896da79fbbcSStefano Zampini /* first, set the diagonal elements */ 897da79fbbcSStefano Zampini AAUp[offset] = 1.0/v[nz]; 898da79fbbcSStefano Zampini AALo[offset] = 1.0/v[nz]; 899da79fbbcSStefano Zampini 900da79fbbcSStefano Zampini offset+=1; 901da79fbbcSStefano Zampini if (nz>0) { 902da79fbbcSStefano Zampini ierr = PetscArraycpy(&(AAUp[offset]), v, nz);CHKERRQ(ierr); 903da79fbbcSStefano Zampini for (j=offset; j<offset+nz; j++) { 904da79fbbcSStefano Zampini AAUp[j] = -AAUp[j]; 905da79fbbcSStefano Zampini AALo[j] = AAUp[j]/v[nz]; 906da79fbbcSStefano Zampini } 907da79fbbcSStefano Zampini offset+=nz; 908da79fbbcSStefano Zampini } 909da79fbbcSStefano Zampini } 910da79fbbcSStefano Zampini if (!upTriFactor) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 911da79fbbcSStefano Zampini if (!loTriFactor) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 912da79fbbcSStefano Zampini upTriFactor->csrMat->values->assign(AAUp, AAUp+a->nz); 913da79fbbcSStefano Zampini loTriFactor->csrMat->values->assign(AALo, AALo+a->nz); 914da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(2*(a->nz)*sizeof(PetscScalar));CHKERRQ(ierr); 915da79fbbcSStefano Zampini } 91657d48284SJunchao Zhang cerr = cudaFreeHost(AAUp);CHKERRCUDA(cerr); 91757d48284SJunchao Zhang cerr = cudaFreeHost(AALo);CHKERRCUDA(cerr); 918087f3262SPaul Mullowney } catch(char *ex) { 919087f3262SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 920087f3262SPaul Mullowney } 921087f3262SPaul Mullowney } 922087f3262SPaul Mullowney PetscFunctionReturn(0); 923087f3262SPaul Mullowney } 924087f3262SPaul Mullowney 925087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEICCAnalysisAndCopyToGPU(Mat A) 9269ae82921SPaul Mullowney { 9279ae82921SPaul Mullowney PetscErrorCode ierr; 928087f3262SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 929087f3262SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 930087f3262SPaul Mullowney IS ip = a->row; 931087f3262SPaul Mullowney PetscBool perm_identity; 932087f3262SPaul Mullowney PetscInt n = A->rmap->n; 933087f3262SPaul Mullowney 934087f3262SPaul Mullowney PetscFunctionBegin; 935da79fbbcSStefano Zampini if (!cusparseTriFactors) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 936087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEBuildICCTriMatrices(A);CHKERRQ(ierr); 937da79fbbcSStefano Zampini if (!cusparseTriFactors->workVector) { cusparseTriFactors->workVector = new THRUSTARRAY(n); } 938aa372e3fSPaul Mullowney cusparseTriFactors->nnz=(a->nz-n)*2 + n; 939aa372e3fSPaul Mullowney 940da79fbbcSStefano Zampini A->offloadmask = PETSC_OFFLOAD_BOTH; 941da79fbbcSStefano Zampini 942087f3262SPaul Mullowney /* lower triangular indices */ 943087f3262SPaul Mullowney ierr = ISIdentity(ip,&perm_identity);CHKERRQ(ierr); 944087f3262SPaul Mullowney if (!perm_identity) { 9454e4bbfaaSStefano Zampini IS iip; 946da79fbbcSStefano Zampini const PetscInt *irip,*rip; 9474e4bbfaaSStefano Zampini 9484e4bbfaaSStefano Zampini ierr = ISInvertPermutation(ip,PETSC_DECIDE,&iip);CHKERRQ(ierr); 9494e4bbfaaSStefano Zampini ierr = ISGetIndices(iip,&irip);CHKERRQ(ierr); 950da79fbbcSStefano Zampini ierr = ISGetIndices(ip,&rip);CHKERRQ(ierr); 951aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices = new THRUSTINTARRAY(n); 952aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices->assign(rip, rip+n); 953aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices = new THRUSTINTARRAY(n); 9544e4bbfaaSStefano Zampini cusparseTriFactors->cpermIndices->assign(irip, irip+n); 9554e4bbfaaSStefano Zampini ierr = ISRestoreIndices(iip,&irip);CHKERRQ(ierr); 9564e4bbfaaSStefano Zampini ierr = ISDestroy(&iip);CHKERRQ(ierr); 957087f3262SPaul Mullowney ierr = ISRestoreIndices(ip,&rip);CHKERRQ(ierr); 958da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(2.*n*sizeof(PetscInt));CHKERRQ(ierr); 959da79fbbcSStefano Zampini } 960087f3262SPaul Mullowney PetscFunctionReturn(0); 961087f3262SPaul Mullowney } 962087f3262SPaul Mullowney 963087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorNumeric_SeqAIJCUSPARSE(Mat B,Mat A,const MatFactorInfo *info) 964087f3262SPaul Mullowney { 965087f3262SPaul Mullowney Mat_SeqAIJ *b = (Mat_SeqAIJ*)B->data; 966087f3262SPaul Mullowney IS ip = b->row; 967087f3262SPaul Mullowney PetscBool perm_identity; 968b175d8bbSPaul Mullowney PetscErrorCode ierr; 969087f3262SPaul Mullowney 970087f3262SPaul Mullowney PetscFunctionBegin; 97157181aedSStefano Zampini ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 972087f3262SPaul Mullowney ierr = MatCholeskyFactorNumeric_SeqAIJ(B,A,info);CHKERRQ(ierr); 973ccdfe979SStefano Zampini B->offloadmask = PETSC_OFFLOAD_CPU; 974087f3262SPaul Mullowney /* determine which version of MatSolve needs to be used. */ 975087f3262SPaul Mullowney ierr = ISIdentity(ip,&perm_identity);CHKERRQ(ierr); 976087f3262SPaul Mullowney if (perm_identity) { 977087f3262SPaul Mullowney B->ops->solve = MatSolve_SeqAIJCUSPARSE_NaturalOrdering; 978087f3262SPaul Mullowney B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering; 9794e4bbfaaSStefano Zampini B->ops->matsolve = NULL; 9804e4bbfaaSStefano Zampini B->ops->matsolvetranspose = NULL; 981087f3262SPaul Mullowney } else { 982087f3262SPaul Mullowney B->ops->solve = MatSolve_SeqAIJCUSPARSE; 983087f3262SPaul Mullowney B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE; 9844e4bbfaaSStefano Zampini B->ops->matsolve = NULL; 9854e4bbfaaSStefano Zampini B->ops->matsolvetranspose = NULL; 986087f3262SPaul Mullowney } 987087f3262SPaul Mullowney 988087f3262SPaul Mullowney /* get the triangular factors */ 989087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEICCAnalysisAndCopyToGPU(B);CHKERRQ(ierr); 990087f3262SPaul Mullowney PetscFunctionReturn(0); 991087f3262SPaul Mullowney } 9929ae82921SPaul Mullowney 993b175d8bbSPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(Mat A) 994bda325fcSPaul Mullowney { 995bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 996aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 997aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 998da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT; 999da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT; 1000bda325fcSPaul Mullowney cusparseStatus_t stat; 1001aa372e3fSPaul Mullowney cusparseIndexBase_t indexBase; 1002aa372e3fSPaul Mullowney cusparseMatrixType_t matrixType; 1003aa372e3fSPaul Mullowney cusparseFillMode_t fillMode; 1004aa372e3fSPaul Mullowney cusparseDiagType_t diagType; 10051b0a6780SStefano Zampini cudaError_t cerr; 1006da79fbbcSStefano Zampini PetscErrorCode ierr; 1007b175d8bbSPaul Mullowney 1008bda325fcSPaul Mullowney PetscFunctionBegin; 1009aa372e3fSPaul Mullowney /* allocate space for the transpose of the lower triangular factor */ 1010da79fbbcSStefano Zampini ierr = PetscNew(&loTriFactorT);CHKERRQ(ierr); 1011da79fbbcSStefano Zampini loTriFactorT->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 1012aa372e3fSPaul Mullowney 1013aa372e3fSPaul Mullowney /* set the matrix descriptors of the lower triangular factor */ 1014aa372e3fSPaul Mullowney matrixType = cusparseGetMatType(loTriFactor->descr); 1015aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(loTriFactor->descr); 1016aa372e3fSPaul Mullowney fillMode = cusparseGetMatFillMode(loTriFactor->descr)==CUSPARSE_FILL_MODE_UPPER ? 1017aa372e3fSPaul Mullowney CUSPARSE_FILL_MODE_LOWER : CUSPARSE_FILL_MODE_UPPER; 1018aa372e3fSPaul Mullowney diagType = cusparseGetMatDiagType(loTriFactor->descr); 1019aa372e3fSPaul Mullowney 1020aa372e3fSPaul Mullowney /* Create the matrix description */ 102157d48284SJunchao Zhang stat = cusparseCreateMatDescr(&loTriFactorT->descr);CHKERRCUSPARSE(stat); 102257d48284SJunchao Zhang stat = cusparseSetMatIndexBase(loTriFactorT->descr, indexBase);CHKERRCUSPARSE(stat); 102357d48284SJunchao Zhang stat = cusparseSetMatType(loTriFactorT->descr, matrixType);CHKERRCUSPARSE(stat); 102457d48284SJunchao Zhang stat = cusparseSetMatFillMode(loTriFactorT->descr, fillMode);CHKERRCUSPARSE(stat); 102557d48284SJunchao Zhang stat = cusparseSetMatDiagType(loTriFactorT->descr, diagType);CHKERRCUSPARSE(stat); 1026aa372e3fSPaul Mullowney 1027aa372e3fSPaul Mullowney /* set the operation */ 1028aa372e3fSPaul Mullowney loTriFactorT->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 1029aa372e3fSPaul Mullowney 1030aa372e3fSPaul Mullowney /* allocate GPU space for the CSC of the lower triangular factor*/ 1031aa372e3fSPaul Mullowney loTriFactorT->csrMat = new CsrMatrix; 1032afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows = loTriFactor->csrMat->num_cols; 1033afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_cols = loTriFactor->csrMat->num_rows; 1034aa372e3fSPaul Mullowney loTriFactorT->csrMat->num_entries = loTriFactor->csrMat->num_entries; 1035afb2bd1cSJunchao Zhang loTriFactorT->csrMat->row_offsets = new THRUSTINTARRAY32(loTriFactorT->csrMat->num_rows+1); 1036afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices = new THRUSTINTARRAY32(loTriFactorT->csrMat->num_entries); 1037afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values = new THRUSTARRAY(loTriFactorT->csrMat->num_entries); 1038aa372e3fSPaul Mullowney 1039aa372e3fSPaul Mullowney /* compute the transpose of the lower triangular factor, i.e. the CSC */ 1040afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1041afb2bd1cSJunchao Zhang stat = cusparseCsr2cscEx2_bufferSize(cusparseTriFactors->handle, loTriFactor->csrMat->num_rows, 1042afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_cols, loTriFactor->csrMat->num_entries, 1043afb2bd1cSJunchao Zhang loTriFactor->csrMat->values->data().get(), 1044afb2bd1cSJunchao Zhang loTriFactor->csrMat->row_offsets->data().get(), 1045afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), 1046afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values->data().get(), 1047afb2bd1cSJunchao Zhang loTriFactorT->csrMat->row_offsets->data().get(), loTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1048afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC,indexBase, 1049afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG1, &loTriFactor->csr2cscBufferSize);CHKERRCUSPARSE(stat); 10501b0a6780SStefano Zampini cerr = cudaMalloc(&loTriFactor->csr2cscBuffer,loTriFactor->csr2cscBufferSize);CHKERRCUDA(cerr); 1051afb2bd1cSJunchao Zhang #endif 1052afb2bd1cSJunchao Zhang 1053da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1054aa372e3fSPaul Mullowney stat = cusparse_csr2csc(cusparseTriFactors->handle, loTriFactor->csrMat->num_rows, 1055aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols, loTriFactor->csrMat->num_entries, 1056aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), 1057aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->data().get(), 1058aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->data().get(), 1059aa372e3fSPaul Mullowney loTriFactorT->csrMat->values->data().get(), 1060afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1061afb2bd1cSJunchao Zhang loTriFactorT->csrMat->row_offsets->data().get(), loTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1062afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase, 1063d49cd2b7SBarry Smith CUSPARSE_CSR2CSC_ALG1, loTriFactor->csr2cscBuffer);CHKERRCUSPARSE(stat); 1064afb2bd1cSJunchao Zhang #else 1065afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), 1066d49cd2b7SBarry Smith CUSPARSE_ACTION_NUMERIC, indexBase);CHKERRCUSPARSE(stat); 1067afb2bd1cSJunchao Zhang #endif 1068da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1069da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1070aa372e3fSPaul Mullowney 1071afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 1072da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1073afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&loTriFactorT->solveInfo);CHKERRCUSPARSE(stat); 10741b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1075afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, loTriFactorT->solveOp, 1076afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, loTriFactorT->csrMat->num_entries, loTriFactorT->descr, 1077afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), 1078afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices->data().get(), loTriFactorT->solveInfo, 1079afb2bd1cSJunchao Zhang &loTriFactorT->solveBufferSize);CHKERRCUSPARSE(stat); 1080afb2bd1cSJunchao Zhang cerr = cudaMalloc(&loTriFactorT->solveBuffer,loTriFactorT->solveBufferSize);CHKERRCUDA(cerr); 1081afb2bd1cSJunchao Zhang #endif 1082afb2bd1cSJunchao Zhang 1083afb2bd1cSJunchao Zhang /* perform the solve analysis */ 1084aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, loTriFactorT->solveOp, 1085afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, loTriFactorT->csrMat->num_entries, loTriFactorT->descr, 1086afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), 1087d49cd2b7SBarry Smith loTriFactorT->csrMat->column_indices->data().get(), 10881b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1089d49cd2b7SBarry Smith loTriFactorT->solveInfo, 1090d49cd2b7SBarry Smith loTriFactorT->solvePolicy, loTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1091d49cd2b7SBarry Smith #else 1092d49cd2b7SBarry Smith loTriFactorT->solveInfo);CHKERRCUSPARSE(stat); 1093afb2bd1cSJunchao Zhang #endif 1094da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1095da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1096aa372e3fSPaul Mullowney 1097da79fbbcSStefano Zampini /* assign the pointer */ 1098aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->loTriFactorPtrTranspose = loTriFactorT; 1099aa372e3fSPaul Mullowney 1100aa372e3fSPaul Mullowney /*********************************************/ 1101aa372e3fSPaul Mullowney /* Now the Transpose of the Upper Tri Factor */ 1102aa372e3fSPaul Mullowney /*********************************************/ 1103aa372e3fSPaul Mullowney 1104aa372e3fSPaul Mullowney /* allocate space for the transpose of the upper triangular factor */ 1105da79fbbcSStefano Zampini ierr = PetscNew(&upTriFactorT);CHKERRQ(ierr); 1106da79fbbcSStefano Zampini upTriFactorT->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 1107aa372e3fSPaul Mullowney 1108aa372e3fSPaul Mullowney /* set the matrix descriptors of the upper triangular factor */ 1109aa372e3fSPaul Mullowney matrixType = cusparseGetMatType(upTriFactor->descr); 1110aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(upTriFactor->descr); 1111aa372e3fSPaul Mullowney fillMode = cusparseGetMatFillMode(upTriFactor->descr)==CUSPARSE_FILL_MODE_UPPER ? 1112aa372e3fSPaul Mullowney CUSPARSE_FILL_MODE_LOWER : CUSPARSE_FILL_MODE_UPPER; 1113aa372e3fSPaul Mullowney diagType = cusparseGetMatDiagType(upTriFactor->descr); 1114aa372e3fSPaul Mullowney 1115aa372e3fSPaul Mullowney /* Create the matrix description */ 111657d48284SJunchao Zhang stat = cusparseCreateMatDescr(&upTriFactorT->descr);CHKERRCUSPARSE(stat); 111757d48284SJunchao Zhang stat = cusparseSetMatIndexBase(upTriFactorT->descr, indexBase);CHKERRCUSPARSE(stat); 111857d48284SJunchao Zhang stat = cusparseSetMatType(upTriFactorT->descr, matrixType);CHKERRCUSPARSE(stat); 111957d48284SJunchao Zhang stat = cusparseSetMatFillMode(upTriFactorT->descr, fillMode);CHKERRCUSPARSE(stat); 112057d48284SJunchao Zhang stat = cusparseSetMatDiagType(upTriFactorT->descr, diagType);CHKERRCUSPARSE(stat); 1121aa372e3fSPaul Mullowney 1122aa372e3fSPaul Mullowney /* set the operation */ 1123aa372e3fSPaul Mullowney upTriFactorT->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 1124aa372e3fSPaul Mullowney 1125aa372e3fSPaul Mullowney /* allocate GPU space for the CSC of the upper triangular factor*/ 1126aa372e3fSPaul Mullowney upTriFactorT->csrMat = new CsrMatrix; 1127afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows = upTriFactor->csrMat->num_cols; 1128afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_cols = upTriFactor->csrMat->num_rows; 1129aa372e3fSPaul Mullowney upTriFactorT->csrMat->num_entries = upTriFactor->csrMat->num_entries; 1130afb2bd1cSJunchao Zhang upTriFactorT->csrMat->row_offsets = new THRUSTINTARRAY32(upTriFactorT->csrMat->num_rows+1); 1131afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices = new THRUSTINTARRAY32(upTriFactorT->csrMat->num_entries); 1132afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values = new THRUSTARRAY(upTriFactorT->csrMat->num_entries); 1133aa372e3fSPaul Mullowney 1134aa372e3fSPaul Mullowney /* compute the transpose of the upper triangular factor, i.e. the CSC */ 1135afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1136afb2bd1cSJunchao Zhang stat = cusparseCsr2cscEx2_bufferSize(cusparseTriFactors->handle,upTriFactor->csrMat->num_rows, 1137afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_cols, upTriFactor->csrMat->num_entries, 1138afb2bd1cSJunchao Zhang upTriFactor->csrMat->values->data().get(), 1139afb2bd1cSJunchao Zhang upTriFactor->csrMat->row_offsets->data().get(), 1140afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), 1141afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values->data().get(), 1142afb2bd1cSJunchao Zhang upTriFactorT->csrMat->row_offsets->data().get(), upTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1143afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC,indexBase, 1144afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG1, &upTriFactor->csr2cscBufferSize);CHKERRCUSPARSE(stat); 1145afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactor->csr2cscBuffer,upTriFactor->csr2cscBufferSize);CHKERRCUDA(cerr); 1146afb2bd1cSJunchao Zhang #endif 1147afb2bd1cSJunchao Zhang 1148da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1149aa372e3fSPaul Mullowney stat = cusparse_csr2csc(cusparseTriFactors->handle, upTriFactor->csrMat->num_rows, 1150aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols, upTriFactor->csrMat->num_entries, 1151aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), 1152aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->data().get(), 1153aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->data().get(), 1154aa372e3fSPaul Mullowney upTriFactorT->csrMat->values->data().get(), 1155afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1156afb2bd1cSJunchao Zhang upTriFactorT->csrMat->row_offsets->data().get(), upTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1157afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase, 1158d49cd2b7SBarry Smith CUSPARSE_CSR2CSC_ALG1, upTriFactor->csr2cscBuffer);CHKERRCUSPARSE(stat); 1159afb2bd1cSJunchao Zhang #else 1160afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), 1161d49cd2b7SBarry Smith CUSPARSE_ACTION_NUMERIC, indexBase);CHKERRCUSPARSE(stat); 1162afb2bd1cSJunchao Zhang #endif 1163d49cd2b7SBarry Smith 1164da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1165da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1166aa372e3fSPaul Mullowney 1167afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 1168da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1169afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&upTriFactorT->solveInfo);CHKERRCUSPARSE(stat); 11701b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1171afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, upTriFactorT->solveOp, 1172afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, upTriFactorT->csrMat->num_entries, upTriFactorT->descr, 1173afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), 1174afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices->data().get(), upTriFactorT->solveInfo, 1175afb2bd1cSJunchao Zhang &upTriFactorT->solveBufferSize);CHKERRCUSPARSE(stat); 1176afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactorT->solveBuffer,upTriFactorT->solveBufferSize);CHKERRCUDA(cerr); 1177afb2bd1cSJunchao Zhang #endif 1178afb2bd1cSJunchao Zhang 1179afb2bd1cSJunchao Zhang /* perform the solve analysis */ 1180aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, upTriFactorT->solveOp, 1181afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, upTriFactorT->csrMat->num_entries, upTriFactorT->descr, 1182afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), 1183d49cd2b7SBarry Smith upTriFactorT->csrMat->column_indices->data().get(), 11841b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1185d49cd2b7SBarry Smith upTriFactorT->solveInfo, 1186d49cd2b7SBarry Smith upTriFactorT->solvePolicy, upTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1187d49cd2b7SBarry Smith #else 1188d49cd2b7SBarry Smith upTriFactorT->solveInfo);CHKERRCUSPARSE(stat); 1189afb2bd1cSJunchao Zhang #endif 1190d49cd2b7SBarry Smith 1191da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1192da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1193aa372e3fSPaul Mullowney 1194da79fbbcSStefano Zampini /* assign the pointer */ 1195aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->upTriFactorPtrTranspose = upTriFactorT; 1196bda325fcSPaul Mullowney PetscFunctionReturn(0); 1197bda325fcSPaul Mullowney } 1198bda325fcSPaul Mullowney 1199a49f1ed0SStefano Zampini struct PetscScalarToPetscInt 1200a49f1ed0SStefano Zampini { 1201a49f1ed0SStefano Zampini __host__ __device__ 1202a49f1ed0SStefano Zampini PetscInt operator()(PetscScalar s) 1203a49f1ed0SStefano Zampini { 1204a49f1ed0SStefano Zampini return (PetscInt)PetscRealPart(s); 1205a49f1ed0SStefano Zampini } 1206a49f1ed0SStefano Zampini }; 1207a49f1ed0SStefano Zampini 12081a2c6b5cSJunchao Zhang static PetscErrorCode MatSeqAIJCUSPARSEFormExplicitTransposeForMult(Mat A) 1209bda325fcSPaul Mullowney { 1210aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 1211a49f1ed0SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *matstruct, *matstructT; 1212bda325fcSPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 1213bda325fcSPaul Mullowney cusparseStatus_t stat; 1214aa372e3fSPaul Mullowney cusparseIndexBase_t indexBase; 1215b06137fdSPaul Mullowney cudaError_t err; 121685ba7357SStefano Zampini PetscErrorCode ierr; 1217b175d8bbSPaul Mullowney 1218bda325fcSPaul Mullowney PetscFunctionBegin; 12191a2c6b5cSJunchao Zhang if (!A->form_explicit_transpose || !A->rmap->n || !A->cmap->n) PetscFunctionReturn(0); 1220a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 1221a49f1ed0SStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->mat; 1222e8d2b73aSMark Adams if (!matstruct) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing mat struct"); 1223a49f1ed0SStefano Zampini matstructT = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->matTranspose; 1224e8d2b73aSMark Adams if (A->transupdated && !matstructT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing matTranspose struct"); 12251a2c6b5cSJunchao Zhang if (A->transupdated) PetscFunctionReturn(0); 122685ba7357SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1227ee7b52eaSHong Zhang ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1228a49f1ed0SStefano Zampini if (cusparsestruct->format != MAT_CUSPARSE_CSR) { 1229a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr); 1230a49f1ed0SStefano Zampini } 1231a49f1ed0SStefano Zampini if (!cusparsestruct->matTranspose) { /* create cusparse matrix */ 1232aa372e3fSPaul Mullowney matstructT = new Mat_SeqAIJCUSPARSEMultStruct; 123357d48284SJunchao Zhang stat = cusparseCreateMatDescr(&matstructT->descr);CHKERRCUSPARSE(stat); 1234aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(matstruct->descr); 123557d48284SJunchao Zhang stat = cusparseSetMatIndexBase(matstructT->descr, indexBase);CHKERRCUSPARSE(stat); 123657d48284SJunchao Zhang stat = cusparseSetMatType(matstructT->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 1237aa372e3fSPaul Mullowney 1238b06137fdSPaul Mullowney /* set alpha and beta */ 1239afb2bd1cSJunchao Zhang err = cudaMalloc((void **)&(matstructT->alpha_one),sizeof(PetscScalar));CHKERRCUDA(err); 12407656d835SStefano Zampini err = cudaMalloc((void **)&(matstructT->beta_zero),sizeof(PetscScalar));CHKERRCUDA(err); 12417656d835SStefano Zampini err = cudaMalloc((void **)&(matstructT->beta_one), sizeof(PetscScalar));CHKERRCUDA(err); 1242afb2bd1cSJunchao Zhang err = cudaMemcpy(matstructT->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 12437656d835SStefano Zampini err = cudaMemcpy(matstructT->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 12447656d835SStefano Zampini err = cudaMemcpy(matstructT->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 1245b06137fdSPaul Mullowney 1246aa372e3fSPaul Mullowney if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 1247aa372e3fSPaul Mullowney CsrMatrix *matrixT = new CsrMatrix; 1248a49f1ed0SStefano Zampini matstructT->mat = matrixT; 1249554b8892SKarl Rupp matrixT->num_rows = A->cmap->n; 1250554b8892SKarl Rupp matrixT->num_cols = A->rmap->n; 1251aa372e3fSPaul Mullowney matrixT->num_entries = a->nz; 1252a8bd5306SMark Adams matrixT->row_offsets = new THRUSTINTARRAY32(matrixT->num_rows+1); 1253aa372e3fSPaul Mullowney matrixT->column_indices = new THRUSTINTARRAY32(a->nz); 1254aa372e3fSPaul Mullowney matrixT->values = new THRUSTARRAY(a->nz); 1255a3fdcf43SKarl Rupp 1256039c6fbaSStefano Zampini if (!cusparsestruct->rowoffsets_gpu) { cusparsestruct->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n+1); } 125781902715SJunchao Zhang cusparsestruct->rowoffsets_gpu->assign(a->i,a->i+A->rmap->n+1); 1258afb2bd1cSJunchao Zhang 1259afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1260afb2bd1cSJunchao Zhang stat = cusparseCreateCsr(&matstructT->matDescr, 1261afb2bd1cSJunchao Zhang matrixT->num_rows, matrixT->num_cols, matrixT->num_entries, 1262afb2bd1cSJunchao Zhang matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), 1263afb2bd1cSJunchao Zhang matrixT->values->data().get(), 1264afb2bd1cSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, /* row offset, col idx type due to THRUSTINTARRAY32 */ 1265afb2bd1cSJunchao Zhang indexBase,cusparse_scalartype);CHKERRCUSPARSE(stat); 1266afb2bd1cSJunchao Zhang #endif 1267aa372e3fSPaul Mullowney } else if (cusparsestruct->format == MAT_CUSPARSE_ELL || cusparsestruct->format == MAT_CUSPARSE_HYB) { 1268afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1269afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 1270afb2bd1cSJunchao Zhang #else 1271aa372e3fSPaul Mullowney CsrMatrix *temp = new CsrMatrix; 127251c6d536SStefano Zampini CsrMatrix *tempT = new CsrMatrix; 127351c6d536SStefano Zampini /* First convert HYB to CSR */ 1274aa372e3fSPaul Mullowney temp->num_rows = A->rmap->n; 1275aa372e3fSPaul Mullowney temp->num_cols = A->cmap->n; 1276aa372e3fSPaul Mullowney temp->num_entries = a->nz; 1277aa372e3fSPaul Mullowney temp->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 1278aa372e3fSPaul Mullowney temp->column_indices = new THRUSTINTARRAY32(a->nz); 1279aa372e3fSPaul Mullowney temp->values = new THRUSTARRAY(a->nz); 1280aa372e3fSPaul Mullowney 1281aa372e3fSPaul Mullowney stat = cusparse_hyb2csr(cusparsestruct->handle, 1282aa372e3fSPaul Mullowney matstruct->descr, (cusparseHybMat_t)matstruct->mat, 1283aa372e3fSPaul Mullowney temp->values->data().get(), 1284aa372e3fSPaul Mullowney temp->row_offsets->data().get(), 128557d48284SJunchao Zhang temp->column_indices->data().get());CHKERRCUSPARSE(stat); 1286aa372e3fSPaul Mullowney 1287aa372e3fSPaul Mullowney /* Next, convert CSR to CSC (i.e. the matrix transpose) */ 1288aa372e3fSPaul Mullowney tempT->num_rows = A->rmap->n; 1289aa372e3fSPaul Mullowney tempT->num_cols = A->cmap->n; 1290aa372e3fSPaul Mullowney tempT->num_entries = a->nz; 1291aa372e3fSPaul Mullowney tempT->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 1292aa372e3fSPaul Mullowney tempT->column_indices = new THRUSTINTARRAY32(a->nz); 1293aa372e3fSPaul Mullowney tempT->values = new THRUSTARRAY(a->nz); 1294aa372e3fSPaul Mullowney 1295aa372e3fSPaul Mullowney stat = cusparse_csr2csc(cusparsestruct->handle, temp->num_rows, 1296aa372e3fSPaul Mullowney temp->num_cols, temp->num_entries, 1297aa372e3fSPaul Mullowney temp->values->data().get(), 1298aa372e3fSPaul Mullowney temp->row_offsets->data().get(), 1299aa372e3fSPaul Mullowney temp->column_indices->data().get(), 1300aa372e3fSPaul Mullowney tempT->values->data().get(), 1301aa372e3fSPaul Mullowney tempT->column_indices->data().get(), 1302aa372e3fSPaul Mullowney tempT->row_offsets->data().get(), 130357d48284SJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase);CHKERRCUSPARSE(stat); 1304aa372e3fSPaul Mullowney 1305aa372e3fSPaul Mullowney /* Last, convert CSC to HYB */ 1306aa372e3fSPaul Mullowney cusparseHybMat_t hybMat; 130757d48284SJunchao Zhang stat = cusparseCreateHybMat(&hybMat);CHKERRCUSPARSE(stat); 1308aa372e3fSPaul Mullowney cusparseHybPartition_t partition = cusparsestruct->format==MAT_CUSPARSE_ELL ? 1309aa372e3fSPaul Mullowney CUSPARSE_HYB_PARTITION_MAX : CUSPARSE_HYB_PARTITION_AUTO; 1310aa372e3fSPaul Mullowney stat = cusparse_csr2hyb(cusparsestruct->handle, A->rmap->n, A->cmap->n, 1311aa372e3fSPaul Mullowney matstructT->descr, tempT->values->data().get(), 1312aa372e3fSPaul Mullowney tempT->row_offsets->data().get(), 1313aa372e3fSPaul Mullowney tempT->column_indices->data().get(), 131457d48284SJunchao Zhang hybMat, 0, partition);CHKERRCUSPARSE(stat); 1315aa372e3fSPaul Mullowney 1316aa372e3fSPaul Mullowney /* assign the pointer */ 1317aa372e3fSPaul Mullowney matstructT->mat = hybMat; 13181a2c6b5cSJunchao Zhang A->transupdated = PETSC_TRUE; 1319aa372e3fSPaul Mullowney /* delete temporaries */ 1320aa372e3fSPaul Mullowney if (tempT) { 1321aa372e3fSPaul Mullowney if (tempT->values) delete (THRUSTARRAY*) tempT->values; 1322aa372e3fSPaul Mullowney if (tempT->column_indices) delete (THRUSTINTARRAY32*) tempT->column_indices; 1323aa372e3fSPaul Mullowney if (tempT->row_offsets) delete (THRUSTINTARRAY32*) tempT->row_offsets; 1324aa372e3fSPaul Mullowney delete (CsrMatrix*) tempT; 1325087f3262SPaul Mullowney } 1326aa372e3fSPaul Mullowney if (temp) { 1327aa372e3fSPaul Mullowney if (temp->values) delete (THRUSTARRAY*) temp->values; 1328aa372e3fSPaul Mullowney if (temp->column_indices) delete (THRUSTINTARRAY32*) temp->column_indices; 1329aa372e3fSPaul Mullowney if (temp->row_offsets) delete (THRUSTINTARRAY32*) temp->row_offsets; 1330aa372e3fSPaul Mullowney delete (CsrMatrix*) temp; 1331aa372e3fSPaul Mullowney } 1332afb2bd1cSJunchao Zhang #endif 1333aa372e3fSPaul Mullowney } 1334a49f1ed0SStefano Zampini } 1335a49f1ed0SStefano Zampini if (cusparsestruct->format == MAT_CUSPARSE_CSR) { /* transpose mat struct may be already present, update data */ 1336a49f1ed0SStefano Zampini CsrMatrix *matrix = (CsrMatrix*)matstruct->mat; 1337a49f1ed0SStefano Zampini CsrMatrix *matrixT = (CsrMatrix*)matstructT->mat; 1338e8d2b73aSMark Adams if (!matrix) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix"); 1339e8d2b73aSMark Adams if (!matrix->row_offsets) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix rows"); 1340e8d2b73aSMark Adams if (!matrix->column_indices) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix cols"); 1341e8d2b73aSMark Adams if (!matrix->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix values"); 1342e8d2b73aSMark Adams if (!matrixT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT"); 1343e8d2b73aSMark Adams if (!matrixT->row_offsets) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT rows"); 1344e8d2b73aSMark Adams if (!matrixT->column_indices) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT cols"); 1345e8d2b73aSMark Adams if (!matrixT->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT values"); 1346a49f1ed0SStefano Zampini if (!cusparsestruct->rowoffsets_gpu) { /* this may be absent when we did not construct the transpose with csr2csc */ 1347a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n + 1); 1348a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu->assign(a->i,a->i + A->rmap->n + 1); 1349a49f1ed0SStefano Zampini ierr = PetscLogCpuToGpu((A->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 1350a49f1ed0SStefano Zampini } 1351a49f1ed0SStefano Zampini if (!cusparsestruct->csr2csc_i) { 1352a49f1ed0SStefano Zampini THRUSTARRAY csr2csc_a(matrix->num_entries); 1353a49f1ed0SStefano Zampini PetscStackCallThrust(thrust::sequence(thrust::device, csr2csc_a.begin(), csr2csc_a.end(), 0.0)); 1354a49f1ed0SStefano Zampini 1355a49f1ed0SStefano Zampini indexBase = cusparseGetMatIndexBase(matstruct->descr); 1356a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1357a49f1ed0SStefano Zampini void *csr2cscBuffer; 1358a49f1ed0SStefano Zampini size_t csr2cscBufferSize; 1359a49f1ed0SStefano Zampini stat = cusparseCsr2cscEx2_bufferSize(cusparsestruct->handle, A->rmap->n, 1360a49f1ed0SStefano Zampini A->cmap->n, matrix->num_entries, 1361a49f1ed0SStefano Zampini matrix->values->data().get(), 1362a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu->data().get(), 1363a49f1ed0SStefano Zampini matrix->column_indices->data().get(), 1364a49f1ed0SStefano Zampini matrixT->values->data().get(), 1365a49f1ed0SStefano Zampini matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), cusparse_scalartype, 1366a49f1ed0SStefano Zampini CUSPARSE_ACTION_NUMERIC,indexBase, 1367a49f1ed0SStefano Zampini cusparsestruct->csr2cscAlg, &csr2cscBufferSize);CHKERRCUSPARSE(stat); 1368a49f1ed0SStefano Zampini err = cudaMalloc(&csr2cscBuffer,csr2cscBufferSize);CHKERRCUDA(err); 1369a49f1ed0SStefano Zampini #endif 1370a49f1ed0SStefano Zampini 13711a2c6b5cSJunchao Zhang if (matrix->num_entries) { 13721a2c6b5cSJunchao Zhang /* When there are no nonzeros, this routine mistakenly returns CUSPARSE_STATUS_INVALID_VALUE in 13731a2c6b5cSJunchao Zhang mat_tests-ex62_15_mpiaijcusparse on ranks 0 and 2 with CUDA-11. But CUDA-10 is OK. 13741a2c6b5cSJunchao Zhang I checked every parameters and they were just fine. I have no clue why cusparse complains. 13751a2c6b5cSJunchao Zhang 13761a2c6b5cSJunchao Zhang Per https://docs.nvidia.com/cuda/cusparse/index.html#csr2cscEx2, when nnz = 0, matrixT->row_offsets[] 13771a2c6b5cSJunchao Zhang should be filled with indexBase. So I just take a shortcut here. 13781a2c6b5cSJunchao Zhang */ 13791a2c6b5cSJunchao Zhang stat = cusparse_csr2csc(cusparsestruct->handle, A->rmap->n, 13801a2c6b5cSJunchao Zhang A->cmap->n,matrix->num_entries, 13811a2c6b5cSJunchao Zhang csr2csc_a.data().get(), 13821a2c6b5cSJunchao Zhang cusparsestruct->rowoffsets_gpu->data().get(), 13831a2c6b5cSJunchao Zhang matrix->column_indices->data().get(), 1384a49f1ed0SStefano Zampini matrixT->values->data().get(), 1385a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1386a49f1ed0SStefano Zampini matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), cusparse_scalartype, 1387a49f1ed0SStefano Zampini CUSPARSE_ACTION_NUMERIC,indexBase, 13881a2c6b5cSJunchao Zhang cusparsestruct->csr2cscAlg, csr2cscBuffer);CHKERRCUSPARSE(stat); 1389a49f1ed0SStefano Zampini #else 1390a49f1ed0SStefano Zampini matrixT->column_indices->data().get(), matrixT->row_offsets->data().get(), 13911a2c6b5cSJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase);CHKERRCUSPARSE(stat); 1392a49f1ed0SStefano Zampini #endif 13931a2c6b5cSJunchao Zhang } else { 13941a2c6b5cSJunchao Zhang matrixT->row_offsets->assign(matrixT->row_offsets->size(),indexBase); 13951a2c6b5cSJunchao Zhang } 13961a2c6b5cSJunchao Zhang 1397a49f1ed0SStefano Zampini cusparsestruct->csr2csc_i = new THRUSTINTARRAY(matrix->num_entries); 1398a49f1ed0SStefano Zampini PetscStackCallThrust(thrust::transform(thrust::device,matrixT->values->begin(),matrixT->values->end(),cusparsestruct->csr2csc_i->begin(),PetscScalarToPetscInt())); 1399a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1400a49f1ed0SStefano Zampini err = cudaFree(csr2cscBuffer);CHKERRCUDA(err); 1401a49f1ed0SStefano Zampini #endif 1402a49f1ed0SStefano Zampini } 1403a49f1ed0SStefano Zampini PetscStackCallThrust(thrust::copy(thrust::device,thrust::make_permutation_iterator(matrix->values->begin(), cusparsestruct->csr2csc_i->begin()), 1404a49f1ed0SStefano Zampini thrust::make_permutation_iterator(matrix->values->begin(), cusparsestruct->csr2csc_i->end()), 1405a49f1ed0SStefano Zampini matrixT->values->begin())); 1406a49f1ed0SStefano Zampini } 1407ee7b52eaSHong Zhang ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 140885ba7357SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1409213423ffSJunchao Zhang /* the compressed row indices is not used for matTranspose */ 1410213423ffSJunchao Zhang matstructT->cprowIndices = NULL; 1411aa372e3fSPaul Mullowney /* assign the pointer */ 1412aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSE*)A->spptr)->matTranspose = matstructT; 14131a2c6b5cSJunchao Zhang A->transupdated = PETSC_TRUE; 1414bda325fcSPaul Mullowney PetscFunctionReturn(0); 1415bda325fcSPaul Mullowney } 1416bda325fcSPaul Mullowney 1417a49f1ed0SStefano Zampini /* Why do we need to analyze the transposed matrix again? Can't we just use op(A) = CUSPARSE_OPERATION_TRANSPOSE in MatSolve_SeqAIJCUSPARSE? */ 14186fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE(Mat A,Vec bb,Vec xx) 1419bda325fcSPaul Mullowney { 1420c41cb2e2SAlejandro Lamas Daviña PetscInt n = xx->map->n; 1421465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1422465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1423465f34aeSAlejandro Lamas Daviña thrust::device_ptr<const PetscScalar> bGPU; 1424465f34aeSAlejandro Lamas Daviña thrust::device_ptr<PetscScalar> xGPU; 1425bda325fcSPaul Mullowney cusparseStatus_t stat; 1426bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1427aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1428aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1429aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1430b175d8bbSPaul Mullowney PetscErrorCode ierr; 1431bda325fcSPaul Mullowney 1432bda325fcSPaul Mullowney PetscFunctionBegin; 1433aa372e3fSPaul Mullowney /* Analyze the matrix and create the transpose ... on the fly */ 1434aa372e3fSPaul Mullowney if (!loTriFactorT && !upTriFactorT) { 1435bda325fcSPaul Mullowney ierr = MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(A);CHKERRQ(ierr); 1436aa372e3fSPaul Mullowney loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1437aa372e3fSPaul Mullowney upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1438bda325fcSPaul Mullowney } 1439bda325fcSPaul Mullowney 1440bda325fcSPaul Mullowney /* Get the GPU pointers */ 1441c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1442c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 1443c41cb2e2SAlejandro Lamas Daviña xGPU = thrust::device_pointer_cast(xarray); 1444c41cb2e2SAlejandro Lamas Daviña bGPU = thrust::device_pointer_cast(barray); 1445bda325fcSPaul Mullowney 14467a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1447aa372e3fSPaul Mullowney /* First, reorder with the row permutation */ 1448a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->begin()), 1449c41cb2e2SAlejandro Lamas Daviña thrust::make_permutation_iterator(bGPU+n, cusparseTriFactors->rpermIndices->end()), 1450c41cb2e2SAlejandro Lamas Daviña xGPU); 1451aa372e3fSPaul Mullowney 1452aa372e3fSPaul Mullowney /* First, solve U */ 1453aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactorT->solveOp, 1454afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, 14551b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1456afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_entries, 1457afb2bd1cSJunchao Zhang #endif 1458afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactorT->descr, 1459aa372e3fSPaul Mullowney upTriFactorT->csrMat->values->data().get(), 1460aa372e3fSPaul Mullowney upTriFactorT->csrMat->row_offsets->data().get(), 1461aa372e3fSPaul Mullowney upTriFactorT->csrMat->column_indices->data().get(), 1462aa372e3fSPaul Mullowney upTriFactorT->solveInfo, 1463d49cd2b7SBarry Smith xarray, 14641b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1465d49cd2b7SBarry Smith tempGPU->data().get(), 1466d49cd2b7SBarry Smith upTriFactorT->solvePolicy, upTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1467d49cd2b7SBarry Smith #else 1468d49cd2b7SBarry Smith tempGPU->data().get());CHKERRCUSPARSE(stat); 1469afb2bd1cSJunchao Zhang #endif 1470aa372e3fSPaul Mullowney 1471aa372e3fSPaul Mullowney /* Then, solve L */ 1472aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactorT->solveOp, 1473afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, 14741b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1475afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_entries, 1476afb2bd1cSJunchao Zhang #endif 1477afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactorT->descr, 1478aa372e3fSPaul Mullowney loTriFactorT->csrMat->values->data().get(), 1479aa372e3fSPaul Mullowney loTriFactorT->csrMat->row_offsets->data().get(), 1480aa372e3fSPaul Mullowney loTriFactorT->csrMat->column_indices->data().get(), 1481aa372e3fSPaul Mullowney loTriFactorT->solveInfo, 1482d49cd2b7SBarry Smith tempGPU->data().get(), 14831b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1484d49cd2b7SBarry Smith xarray, 1485d49cd2b7SBarry Smith loTriFactorT->solvePolicy, loTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1486d49cd2b7SBarry Smith #else 1487d49cd2b7SBarry Smith xarray);CHKERRCUSPARSE(stat); 1488afb2bd1cSJunchao Zhang #endif 1489aa372e3fSPaul Mullowney 1490aa372e3fSPaul Mullowney /* Last, copy the solution, xGPU, into a temporary with the column permutation ... can't be done in place. */ 1491a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(xGPU, cusparseTriFactors->cpermIndices->begin()), 1492c41cb2e2SAlejandro Lamas Daviña thrust::make_permutation_iterator(xGPU+n, cusparseTriFactors->cpermIndices->end()), 1493aa372e3fSPaul Mullowney tempGPU->begin()); 1494aa372e3fSPaul Mullowney 1495aa372e3fSPaul Mullowney /* Copy the temporary to the full solution. */ 1496a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),tempGPU->begin(), tempGPU->end(), xGPU); 1497bda325fcSPaul Mullowney 1498bda325fcSPaul Mullowney /* restore */ 1499c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1500c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 1501661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1502958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 1503bda325fcSPaul Mullowney PetscFunctionReturn(0); 1504bda325fcSPaul Mullowney } 1505bda325fcSPaul Mullowney 15066fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering(Mat A,Vec bb,Vec xx) 1507bda325fcSPaul Mullowney { 1508465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1509465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1510bda325fcSPaul Mullowney cusparseStatus_t stat; 1511bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1512aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1513aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1514aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1515b175d8bbSPaul Mullowney PetscErrorCode ierr; 1516bda325fcSPaul Mullowney 1517bda325fcSPaul Mullowney PetscFunctionBegin; 1518aa372e3fSPaul Mullowney /* Analyze the matrix and create the transpose ... on the fly */ 1519aa372e3fSPaul Mullowney if (!loTriFactorT && !upTriFactorT) { 1520bda325fcSPaul Mullowney ierr = MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(A);CHKERRQ(ierr); 1521aa372e3fSPaul Mullowney loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1522aa372e3fSPaul Mullowney upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1523bda325fcSPaul Mullowney } 1524bda325fcSPaul Mullowney 1525bda325fcSPaul Mullowney /* Get the GPU pointers */ 1526c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1527c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 1528bda325fcSPaul Mullowney 15297a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1530aa372e3fSPaul Mullowney /* First, solve U */ 1531aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactorT->solveOp, 1532afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, 15331b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1534afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_entries, 1535afb2bd1cSJunchao Zhang #endif 1536afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactorT->descr, 1537aa372e3fSPaul Mullowney upTriFactorT->csrMat->values->data().get(), 1538aa372e3fSPaul Mullowney upTriFactorT->csrMat->row_offsets->data().get(), 1539aa372e3fSPaul Mullowney upTriFactorT->csrMat->column_indices->data().get(), 1540aa372e3fSPaul Mullowney upTriFactorT->solveInfo, 1541d49cd2b7SBarry Smith barray, 15421b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1543d49cd2b7SBarry Smith tempGPU->data().get(), 1544d49cd2b7SBarry Smith upTriFactorT->solvePolicy, upTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1545d49cd2b7SBarry Smith #else 1546d49cd2b7SBarry Smith tempGPU->data().get());CHKERRCUSPARSE(stat); 1547afb2bd1cSJunchao Zhang #endif 1548aa372e3fSPaul Mullowney 1549aa372e3fSPaul Mullowney /* Then, solve L */ 1550aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactorT->solveOp, 1551afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, 15521b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1553afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_entries, 1554afb2bd1cSJunchao Zhang #endif 1555afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactorT->descr, 1556aa372e3fSPaul Mullowney loTriFactorT->csrMat->values->data().get(), 1557aa372e3fSPaul Mullowney loTriFactorT->csrMat->row_offsets->data().get(), 1558aa372e3fSPaul Mullowney loTriFactorT->csrMat->column_indices->data().get(), 1559aa372e3fSPaul Mullowney loTriFactorT->solveInfo, 1560d49cd2b7SBarry Smith tempGPU->data().get(), 15611b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1562d49cd2b7SBarry Smith xarray, 1563d49cd2b7SBarry Smith loTriFactorT->solvePolicy, loTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1564d49cd2b7SBarry Smith #else 1565d49cd2b7SBarry Smith xarray);CHKERRCUSPARSE(stat); 1566afb2bd1cSJunchao Zhang #endif 1567bda325fcSPaul Mullowney 1568bda325fcSPaul Mullowney /* restore */ 1569c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1570c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 1571661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1572958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 1573bda325fcSPaul Mullowney PetscFunctionReturn(0); 1574bda325fcSPaul Mullowney } 1575bda325fcSPaul Mullowney 15766fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE(Mat A,Vec bb,Vec xx) 15779ae82921SPaul Mullowney { 1578465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1579465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1580465f34aeSAlejandro Lamas Daviña thrust::device_ptr<const PetscScalar> bGPU; 1581465f34aeSAlejandro Lamas Daviña thrust::device_ptr<PetscScalar> xGPU; 15829ae82921SPaul Mullowney cusparseStatus_t stat; 15839ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1584aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 1585aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 1586aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1587b175d8bbSPaul Mullowney PetscErrorCode ierr; 15889ae82921SPaul Mullowney 15899ae82921SPaul Mullowney PetscFunctionBegin; 1590ebc8f436SDominic Meiser 1591e057df02SPaul Mullowney /* Get the GPU pointers */ 1592c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1593c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 1594c41cb2e2SAlejandro Lamas Daviña xGPU = thrust::device_pointer_cast(xarray); 1595c41cb2e2SAlejandro Lamas Daviña bGPU = thrust::device_pointer_cast(barray); 15969ae82921SPaul Mullowney 15977a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1598aa372e3fSPaul Mullowney /* First, reorder with the row permutation */ 1599a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->begin()), 1600c41cb2e2SAlejandro Lamas Daviña thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->end()), 16014e4bbfaaSStefano Zampini tempGPU->begin()); 1602aa372e3fSPaul Mullowney 1603aa372e3fSPaul Mullowney /* Next, solve L */ 1604aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactor->solveOp, 1605afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, 16061b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1607afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_entries, 1608afb2bd1cSJunchao Zhang #endif 1609afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactor->descr, 1610aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), 1611aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->data().get(), 1612aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->data().get(), 1613aa372e3fSPaul Mullowney loTriFactor->solveInfo, 1614d49cd2b7SBarry Smith tempGPU->data().get(), 16151b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1616d49cd2b7SBarry Smith xarray, 1617d49cd2b7SBarry Smith loTriFactor->solvePolicy, loTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 1618d49cd2b7SBarry Smith #else 1619d49cd2b7SBarry Smith xarray);CHKERRCUSPARSE(stat); 1620afb2bd1cSJunchao Zhang #endif 1621aa372e3fSPaul Mullowney 1622aa372e3fSPaul Mullowney /* Then, solve U */ 1623aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactor->solveOp, 1624afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, 16251b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1626afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_entries, 1627afb2bd1cSJunchao Zhang #endif 1628afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactor->descr, 1629aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), 1630aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->data().get(), 1631aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->data().get(), 1632d49cd2b7SBarry Smith upTriFactor->solveInfo,xarray, 16331b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1634d49cd2b7SBarry Smith tempGPU->data().get(), 1635d49cd2b7SBarry Smith upTriFactor->solvePolicy, upTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 1636d49cd2b7SBarry Smith #else 1637d49cd2b7SBarry Smith tempGPU->data().get());CHKERRCUSPARSE(stat); 1638afb2bd1cSJunchao Zhang #endif 1639d49cd2b7SBarry Smith 16404e4bbfaaSStefano Zampini /* Last, reorder with the column permutation */ 1641a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(tempGPU->begin(), cusparseTriFactors->cpermIndices->begin()), 16424e4bbfaaSStefano Zampini thrust::make_permutation_iterator(tempGPU->begin(), cusparseTriFactors->cpermIndices->end()), 16434e4bbfaaSStefano Zampini xGPU); 16449ae82921SPaul Mullowney 1645c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1646c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 1647661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1648958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 16499ae82921SPaul Mullowney PetscFunctionReturn(0); 16509ae82921SPaul Mullowney } 16519ae82921SPaul Mullowney 16526fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE_NaturalOrdering(Mat A,Vec bb,Vec xx) 16539ae82921SPaul Mullowney { 1654465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1655465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 16569ae82921SPaul Mullowney cusparseStatus_t stat; 16579ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1658aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 1659aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 1660aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1661b175d8bbSPaul Mullowney PetscErrorCode ierr; 16629ae82921SPaul Mullowney 16639ae82921SPaul Mullowney PetscFunctionBegin; 1664e057df02SPaul Mullowney /* Get the GPU pointers */ 1665c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1666c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 16679ae82921SPaul Mullowney 16687a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1669aa372e3fSPaul Mullowney /* First, solve L */ 1670aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactor->solveOp, 1671afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, 16721b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1673afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_entries, 1674afb2bd1cSJunchao Zhang #endif 1675afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactor->descr, 1676aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), 1677aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->data().get(), 1678aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->data().get(), 1679aa372e3fSPaul Mullowney loTriFactor->solveInfo, 1680d49cd2b7SBarry Smith barray, 16811b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1682d49cd2b7SBarry Smith tempGPU->data().get(), 1683d49cd2b7SBarry Smith loTriFactor->solvePolicy,loTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 1684d49cd2b7SBarry Smith #else 1685d49cd2b7SBarry Smith tempGPU->data().get());CHKERRCUSPARSE(stat); 1686afb2bd1cSJunchao Zhang #endif 1687d49cd2b7SBarry Smith 1688aa372e3fSPaul Mullowney /* Next, solve U */ 1689aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactor->solveOp, 1690afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, 16911b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1692afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_entries, 1693afb2bd1cSJunchao Zhang #endif 1694afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactor->descr, 1695aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), 1696aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->data().get(), 1697aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->data().get(), 1698aa372e3fSPaul Mullowney upTriFactor->solveInfo, 1699d49cd2b7SBarry Smith tempGPU->data().get(), 17001b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1701d49cd2b7SBarry Smith xarray, 1702d49cd2b7SBarry Smith upTriFactor->solvePolicy, upTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 1703d49cd2b7SBarry Smith #else 1704d49cd2b7SBarry Smith xarray);CHKERRCUSPARSE(stat); 1705afb2bd1cSJunchao Zhang #endif 17069ae82921SPaul Mullowney 1707c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1708c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 1709661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1710958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 17119ae82921SPaul Mullowney PetscFunctionReturn(0); 17129ae82921SPaul Mullowney } 17139ae82921SPaul Mullowney 17147e8381f9SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSECopyFromGPU(Mat A) 17157e8381f9SStefano Zampini { 17167e8381f9SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 17177e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 17187e8381f9SStefano Zampini cudaError_t cerr; 17197e8381f9SStefano Zampini PetscErrorCode ierr; 17207e8381f9SStefano Zampini 17217e8381f9SStefano Zampini PetscFunctionBegin; 17227e8381f9SStefano Zampini if (A->offloadmask == PETSC_OFFLOAD_GPU) { 17237e8381f9SStefano Zampini CsrMatrix *matrix = (CsrMatrix*)cusp->mat->mat; 17247e8381f9SStefano Zampini 17257e8381f9SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSECopyFromGPU,A,0,0,0);CHKERRQ(ierr); 17267e8381f9SStefano Zampini cerr = cudaMemcpy(a->a, matrix->values->data().get(), a->nz*sizeof(PetscScalar), cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 17277e8381f9SStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 17287e8381f9SStefano Zampini ierr = PetscLogGpuToCpu(a->nz*sizeof(PetscScalar));CHKERRQ(ierr); 17297e8381f9SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSECopyFromGPU,A,0,0,0);CHKERRQ(ierr); 17307e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_BOTH; 17317e8381f9SStefano Zampini } 17327e8381f9SStefano Zampini PetscFunctionReturn(0); 17337e8381f9SStefano Zampini } 17347e8381f9SStefano Zampini 17357e8381f9SStefano Zampini static PetscErrorCode MatSeqAIJGetArray_SeqAIJCUSPARSE(Mat A,PetscScalar *array[]) 17367e8381f9SStefano Zampini { 17377e8381f9SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 17387e8381f9SStefano Zampini PetscErrorCode ierr; 17397e8381f9SStefano Zampini 17407e8381f9SStefano Zampini PetscFunctionBegin; 17417e8381f9SStefano Zampini ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 17427e8381f9SStefano Zampini *array = a->a; 17437e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_CPU; 17447e8381f9SStefano Zampini PetscFunctionReturn(0); 17457e8381f9SStefano Zampini } 17467e8381f9SStefano Zampini 1747042217e8SBarry Smith PETSC_INTERN PetscErrorCode MatSeqAIJCUSPARSECopyToGPU(Mat A) 17489ae82921SPaul Mullowney { 1749aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 17507c700b8dSJunchao Zhang Mat_SeqAIJCUSPARSEMultStruct *matstruct = cusparsestruct->mat; 17519ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 1752213423ffSJunchao Zhang PetscInt m = A->rmap->n,*ii,*ridx,tmp; 17539ae82921SPaul Mullowney PetscErrorCode ierr; 1754aa372e3fSPaul Mullowney cusparseStatus_t stat; 1755abb89eb1SStefano Zampini PetscBool both = PETSC_TRUE; 1756b06137fdSPaul Mullowney cudaError_t err; 17579ae82921SPaul Mullowney 17589ae82921SPaul Mullowney PetscFunctionBegin; 1759e8d2b73aSMark Adams if (A->boundtocpu) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Cannot copy to GPU"); 1760c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 1761a49f1ed0SStefano Zampini if (A->nonzerostate == cusparsestruct->nonzerostate && cusparsestruct->format == MAT_CUSPARSE_CSR) { /* Copy values only */ 1762a49f1ed0SStefano Zampini CsrMatrix *matrix; 1763afb2bd1cSJunchao Zhang matrix = (CsrMatrix*)cusparsestruct->mat->mat; 176485ba7357SStefano Zampini 1765e8d2b73aSMark Adams if (a->nz && !a->a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CSR values"); 176685ba7357SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 1767afb2bd1cSJunchao Zhang matrix->values->assign(a->a, a->a+a->nz); 176805035670SJunchao Zhang err = WaitForCUDA();CHKERRCUDA(err); 17694863603aSSatish Balay ierr = PetscLogCpuToGpu((a->nz)*sizeof(PetscScalar));CHKERRQ(ierr); 177085ba7357SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 1771a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_FALSE);CHKERRQ(ierr); 177234d6c7a5SJose E. Roman } else { 1773abb89eb1SStefano Zampini PetscInt nnz; 177485ba7357SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 17757c700b8dSJunchao Zhang ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&cusparsestruct->mat,cusparsestruct->format);CHKERRQ(ierr); 1776a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr); 17777c700b8dSJunchao Zhang delete cusparsestruct->workVector; 177881902715SJunchao Zhang delete cusparsestruct->rowoffsets_gpu; 1779a49f1ed0SStefano Zampini cusparsestruct->workVector = NULL; 1780a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu = NULL; 17819ae82921SPaul Mullowney try { 17829ae82921SPaul Mullowney if (a->compressedrow.use) { 17839ae82921SPaul Mullowney m = a->compressedrow.nrows; 17849ae82921SPaul Mullowney ii = a->compressedrow.i; 17859ae82921SPaul Mullowney ridx = a->compressedrow.rindex; 17869ae82921SPaul Mullowney } else { 1787213423ffSJunchao Zhang m = A->rmap->n; 1788213423ffSJunchao Zhang ii = a->i; 1789e6e9a74fSStefano Zampini ridx = NULL; 17909ae82921SPaul Mullowney } 1791e8d2b73aSMark Adams if (!ii) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CSR row data"); 1792e8d2b73aSMark Adams if (m && !a->j) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CSR column data"); 1793abb89eb1SStefano Zampini if (!a->a) { nnz = ii[m]; both = PETSC_FALSE; } 1794abb89eb1SStefano Zampini else nnz = a->nz; 17959ae82921SPaul Mullowney 179685ba7357SStefano Zampini /* create cusparse matrix */ 1797abb89eb1SStefano Zampini cusparsestruct->nrows = m; 1798aa372e3fSPaul Mullowney matstruct = new Mat_SeqAIJCUSPARSEMultStruct; 179957d48284SJunchao Zhang stat = cusparseCreateMatDescr(&matstruct->descr);CHKERRCUSPARSE(stat); 180057d48284SJunchao Zhang stat = cusparseSetMatIndexBase(matstruct->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 180157d48284SJunchao Zhang stat = cusparseSetMatType(matstruct->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 18029ae82921SPaul Mullowney 1803afb2bd1cSJunchao Zhang err = cudaMalloc((void **)&(matstruct->alpha_one),sizeof(PetscScalar));CHKERRCUDA(err); 18047656d835SStefano Zampini err = cudaMalloc((void **)&(matstruct->beta_zero),sizeof(PetscScalar));CHKERRCUDA(err); 18057656d835SStefano Zampini err = cudaMalloc((void **)&(matstruct->beta_one), sizeof(PetscScalar));CHKERRCUDA(err); 1806afb2bd1cSJunchao Zhang err = cudaMemcpy(matstruct->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 18077656d835SStefano Zampini err = cudaMemcpy(matstruct->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 18087656d835SStefano Zampini err = cudaMemcpy(matstruct->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 180957d48284SJunchao Zhang stat = cusparseSetPointerMode(cusparsestruct->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 1810b06137fdSPaul Mullowney 1811aa372e3fSPaul Mullowney /* Build a hybrid/ellpack matrix if this option is chosen for the storage */ 1812aa372e3fSPaul Mullowney if (cusparsestruct->format==MAT_CUSPARSE_CSR) { 1813aa372e3fSPaul Mullowney /* set the matrix */ 1814afb2bd1cSJunchao Zhang CsrMatrix *mat= new CsrMatrix; 1815afb2bd1cSJunchao Zhang mat->num_rows = m; 1816afb2bd1cSJunchao Zhang mat->num_cols = A->cmap->n; 1817abb89eb1SStefano Zampini mat->num_entries = nnz; 1818afb2bd1cSJunchao Zhang mat->row_offsets = new THRUSTINTARRAY32(m+1); 1819afb2bd1cSJunchao Zhang mat->row_offsets->assign(ii, ii + m+1); 18209ae82921SPaul Mullowney 1821abb89eb1SStefano Zampini mat->column_indices = new THRUSTINTARRAY32(nnz); 1822abb89eb1SStefano Zampini mat->column_indices->assign(a->j, a->j+nnz); 1823aa372e3fSPaul Mullowney 1824abb89eb1SStefano Zampini mat->values = new THRUSTARRAY(nnz); 1825abb89eb1SStefano Zampini if (a->a) mat->values->assign(a->a, a->a+nnz); 1826aa372e3fSPaul Mullowney 1827aa372e3fSPaul Mullowney /* assign the pointer */ 1828afb2bd1cSJunchao Zhang matstruct->mat = mat; 1829afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1830afb2bd1cSJunchao Zhang if (mat->num_rows) { /* cusparse errors on empty matrices! */ 1831afb2bd1cSJunchao Zhang stat = cusparseCreateCsr(&matstruct->matDescr, 1832afb2bd1cSJunchao Zhang mat->num_rows, mat->num_cols, mat->num_entries, 1833afb2bd1cSJunchao Zhang mat->row_offsets->data().get(), mat->column_indices->data().get(), 1834afb2bd1cSJunchao Zhang mat->values->data().get(), 1835afb2bd1cSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, /* row offset, col idx types due to THRUSTINTARRAY32 */ 1836afb2bd1cSJunchao Zhang CUSPARSE_INDEX_BASE_ZERO,cusparse_scalartype);CHKERRCUSPARSE(stat); 1837afb2bd1cSJunchao Zhang } 1838afb2bd1cSJunchao Zhang #endif 1839aa372e3fSPaul Mullowney } else if (cusparsestruct->format==MAT_CUSPARSE_ELL || cusparsestruct->format==MAT_CUSPARSE_HYB) { 1840afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1841afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 1842afb2bd1cSJunchao Zhang #else 1843afb2bd1cSJunchao Zhang CsrMatrix *mat= new CsrMatrix; 1844afb2bd1cSJunchao Zhang mat->num_rows = m; 1845afb2bd1cSJunchao Zhang mat->num_cols = A->cmap->n; 1846abb89eb1SStefano Zampini mat->num_entries = nnz; 1847afb2bd1cSJunchao Zhang mat->row_offsets = new THRUSTINTARRAY32(m+1); 1848afb2bd1cSJunchao Zhang mat->row_offsets->assign(ii, ii + m+1); 1849aa372e3fSPaul Mullowney 1850abb89eb1SStefano Zampini mat->column_indices = new THRUSTINTARRAY32(nnz); 1851abb89eb1SStefano Zampini mat->column_indices->assign(a->j, a->j+nnz); 1852aa372e3fSPaul Mullowney 1853abb89eb1SStefano Zampini mat->values = new THRUSTARRAY(nnz); 1854abb89eb1SStefano Zampini if (a->a) mat->values->assign(a->a, a->a+nnz); 1855aa372e3fSPaul Mullowney 1856aa372e3fSPaul Mullowney cusparseHybMat_t hybMat; 185757d48284SJunchao Zhang stat = cusparseCreateHybMat(&hybMat);CHKERRCUSPARSE(stat); 1858aa372e3fSPaul Mullowney cusparseHybPartition_t partition = cusparsestruct->format==MAT_CUSPARSE_ELL ? 1859aa372e3fSPaul Mullowney CUSPARSE_HYB_PARTITION_MAX : CUSPARSE_HYB_PARTITION_AUTO; 1860afb2bd1cSJunchao Zhang stat = cusparse_csr2hyb(cusparsestruct->handle, mat->num_rows, mat->num_cols, 1861afb2bd1cSJunchao Zhang matstruct->descr, mat->values->data().get(), 1862afb2bd1cSJunchao Zhang mat->row_offsets->data().get(), 1863afb2bd1cSJunchao Zhang mat->column_indices->data().get(), 186457d48284SJunchao Zhang hybMat, 0, partition);CHKERRCUSPARSE(stat); 1865aa372e3fSPaul Mullowney /* assign the pointer */ 1866aa372e3fSPaul Mullowney matstruct->mat = hybMat; 1867aa372e3fSPaul Mullowney 1868afb2bd1cSJunchao Zhang if (mat) { 1869afb2bd1cSJunchao Zhang if (mat->values) delete (THRUSTARRAY*)mat->values; 1870afb2bd1cSJunchao Zhang if (mat->column_indices) delete (THRUSTINTARRAY32*)mat->column_indices; 1871afb2bd1cSJunchao Zhang if (mat->row_offsets) delete (THRUSTINTARRAY32*)mat->row_offsets; 1872afb2bd1cSJunchao Zhang delete (CsrMatrix*)mat; 1873087f3262SPaul Mullowney } 1874afb2bd1cSJunchao Zhang #endif 1875087f3262SPaul Mullowney } 1876ca45077fSPaul Mullowney 1877aa372e3fSPaul Mullowney /* assign the compressed row indices */ 1878213423ffSJunchao Zhang if (a->compressedrow.use) { 1879213423ffSJunchao Zhang cusparsestruct->workVector = new THRUSTARRAY(m); 1880aa372e3fSPaul Mullowney matstruct->cprowIndices = new THRUSTINTARRAY(m); 1881aa372e3fSPaul Mullowney matstruct->cprowIndices->assign(ridx,ridx+m); 1882213423ffSJunchao Zhang tmp = m; 1883213423ffSJunchao Zhang } else { 1884213423ffSJunchao Zhang cusparsestruct->workVector = NULL; 1885213423ffSJunchao Zhang matstruct->cprowIndices = NULL; 1886213423ffSJunchao Zhang tmp = 0; 1887213423ffSJunchao Zhang } 1888213423ffSJunchao Zhang ierr = PetscLogCpuToGpu(((m+1)+(a->nz))*sizeof(int)+tmp*sizeof(PetscInt)+(3+(a->nz))*sizeof(PetscScalar));CHKERRQ(ierr); 1889aa372e3fSPaul Mullowney 1890aa372e3fSPaul Mullowney /* assign the pointer */ 1891aa372e3fSPaul Mullowney cusparsestruct->mat = matstruct; 18929ae82921SPaul Mullowney } catch(char *ex) { 18939ae82921SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 18949ae82921SPaul Mullowney } 189505035670SJunchao Zhang err = WaitForCUDA();CHKERRCUDA(err); 189685ba7357SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 189734d6c7a5SJose E. Roman cusparsestruct->nonzerostate = A->nonzerostate; 189834d6c7a5SJose E. Roman } 1899abb89eb1SStefano Zampini if (both) A->offloadmask = PETSC_OFFLOAD_BOTH; 19009ae82921SPaul Mullowney } 19019ae82921SPaul Mullowney PetscFunctionReturn(0); 19029ae82921SPaul Mullowney } 19039ae82921SPaul Mullowney 1904c41cb2e2SAlejandro Lamas Daviña struct VecCUDAPlusEquals 1905aa372e3fSPaul Mullowney { 1906aa372e3fSPaul Mullowney template <typename Tuple> 1907aa372e3fSPaul Mullowney __host__ __device__ 1908aa372e3fSPaul Mullowney void operator()(Tuple t) 1909aa372e3fSPaul Mullowney { 1910aa372e3fSPaul Mullowney thrust::get<1>(t) = thrust::get<1>(t) + thrust::get<0>(t); 1911aa372e3fSPaul Mullowney } 1912aa372e3fSPaul Mullowney }; 1913aa372e3fSPaul Mullowney 19147e8381f9SStefano Zampini struct VecCUDAEquals 19157e8381f9SStefano Zampini { 19167e8381f9SStefano Zampini template <typename Tuple> 19177e8381f9SStefano Zampini __host__ __device__ 19187e8381f9SStefano Zampini void operator()(Tuple t) 19197e8381f9SStefano Zampini { 19207e8381f9SStefano Zampini thrust::get<1>(t) = thrust::get<0>(t); 19217e8381f9SStefano Zampini } 19227e8381f9SStefano Zampini }; 19237e8381f9SStefano Zampini 1924e6e9a74fSStefano Zampini struct VecCUDAEqualsReverse 1925e6e9a74fSStefano Zampini { 1926e6e9a74fSStefano Zampini template <typename Tuple> 1927e6e9a74fSStefano Zampini __host__ __device__ 1928e6e9a74fSStefano Zampini void operator()(Tuple t) 1929e6e9a74fSStefano Zampini { 1930e6e9a74fSStefano Zampini thrust::get<0>(t) = thrust::get<1>(t); 1931e6e9a74fSStefano Zampini } 1932e6e9a74fSStefano Zampini }; 1933e6e9a74fSStefano Zampini 1934afb2bd1cSJunchao Zhang struct MatMatCusparse { 1935ccdfe979SStefano Zampini PetscBool cisdense; 1936ccdfe979SStefano Zampini PetscScalar *Bt; 1937ccdfe979SStefano Zampini Mat X; 1938fcdce8c4SStefano Zampini PetscBool reusesym; /* Cusparse does not have split symbolic and numeric phases for sparse matmat operations */ 1939fcdce8c4SStefano Zampini PetscLogDouble flops; 1940fcdce8c4SStefano Zampini CsrMatrix *Bcsr; 1941b4285af6SJunchao Zhang 1942afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1943fcdce8c4SStefano Zampini cusparseSpMatDescr_t matSpBDescr; 1944afb2bd1cSJunchao Zhang PetscBool initialized; /* C = alpha op(A) op(B) + beta C */ 1945afb2bd1cSJunchao Zhang cusparseDnMatDescr_t matBDescr; 1946afb2bd1cSJunchao Zhang cusparseDnMatDescr_t matCDescr; 1947afb2bd1cSJunchao Zhang PetscInt Blda,Clda; /* Record leading dimensions of B and C here to detect changes*/ 1948b4285af6SJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,4,0) 1949b4285af6SJunchao Zhang void *dBuffer4; 1950b4285af6SJunchao Zhang void *dBuffer5; 1951b4285af6SJunchao Zhang #endif 1952fcdce8c4SStefano Zampini size_t mmBufferSize; 1953fcdce8c4SStefano Zampini void *mmBuffer; 1954fcdce8c4SStefano Zampini void *mmBuffer2; /* SpGEMM WorkEstimation buffer */ 1955fcdce8c4SStefano Zampini cusparseSpGEMMDescr_t spgemmDesc; 1956afb2bd1cSJunchao Zhang #endif 1957afb2bd1cSJunchao Zhang }; 1958ccdfe979SStefano Zampini 1959ccdfe979SStefano Zampini static PetscErrorCode MatDestroy_MatMatCusparse(void *data) 1960ccdfe979SStefano Zampini { 1961ccdfe979SStefano Zampini PetscErrorCode ierr; 1962ccdfe979SStefano Zampini MatMatCusparse *mmdata = (MatMatCusparse *)data; 1963ccdfe979SStefano Zampini cudaError_t cerr; 1964fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1965fcdce8c4SStefano Zampini cusparseStatus_t stat; 1966fcdce8c4SStefano Zampini #endif 1967ccdfe979SStefano Zampini 1968ccdfe979SStefano Zampini PetscFunctionBegin; 1969ccdfe979SStefano Zampini cerr = cudaFree(mmdata->Bt);CHKERRCUDA(cerr); 1970fcdce8c4SStefano Zampini delete mmdata->Bcsr; 1971afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1972fcdce8c4SStefano Zampini if (mmdata->matSpBDescr) { stat = cusparseDestroySpMat(mmdata->matSpBDescr);CHKERRCUSPARSE(stat); } 1973afb2bd1cSJunchao Zhang if (mmdata->matBDescr) { stat = cusparseDestroyDnMat(mmdata->matBDescr);CHKERRCUSPARSE(stat); } 1974afb2bd1cSJunchao Zhang if (mmdata->matCDescr) { stat = cusparseDestroyDnMat(mmdata->matCDescr);CHKERRCUSPARSE(stat); } 1975fcdce8c4SStefano Zampini if (mmdata->spgemmDesc) { stat = cusparseSpGEMM_destroyDescr(mmdata->spgemmDesc);CHKERRCUSPARSE(stat); } 1976b4285af6SJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,4,0) 1977b4285af6SJunchao Zhang if (mmdata->dBuffer4) { cerr = cudaFree(mmdata->dBuffer4);CHKERRCUDA(cerr); } 1978b4285af6SJunchao Zhang if (mmdata->dBuffer5) { cerr = cudaFree(mmdata->dBuffer5);CHKERRCUDA(cerr); } 1979b4285af6SJunchao Zhang #endif 1980b4285af6SJunchao Zhang if (mmdata->mmBuffer) { cerr = cudaFree(mmdata->mmBuffer);CHKERRCUDA(cerr); } 1981b4285af6SJunchao Zhang if (mmdata->mmBuffer2) { cerr = cudaFree(mmdata->mmBuffer2);CHKERRCUDA(cerr); } 1982afb2bd1cSJunchao Zhang #endif 1983ccdfe979SStefano Zampini ierr = MatDestroy(&mmdata->X);CHKERRQ(ierr); 1984ccdfe979SStefano Zampini ierr = PetscFree(data);CHKERRQ(ierr); 1985ccdfe979SStefano Zampini PetscFunctionReturn(0); 1986ccdfe979SStefano Zampini } 1987ccdfe979SStefano Zampini 1988ccdfe979SStefano Zampini PETSC_INTERN PetscErrorCode MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Private(Mat,Mat,Mat,PetscBool,PetscBool); 1989ccdfe979SStefano Zampini 1990ccdfe979SStefano Zampini static PetscErrorCode MatProductNumeric_SeqAIJCUSPARSE_SeqDENSECUDA(Mat C) 1991ccdfe979SStefano Zampini { 1992ccdfe979SStefano Zampini Mat_Product *product = C->product; 1993ccdfe979SStefano Zampini Mat A,B; 1994afb2bd1cSJunchao Zhang PetscInt m,n,blda,clda; 1995ccdfe979SStefano Zampini PetscBool flg,biscuda; 1996ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSE *cusp; 1997ccdfe979SStefano Zampini cusparseStatus_t stat; 1998ccdfe979SStefano Zampini cusparseOperation_t opA; 1999ccdfe979SStefano Zampini const PetscScalar *barray; 2000ccdfe979SStefano Zampini PetscScalar *carray; 2001ccdfe979SStefano Zampini PetscErrorCode ierr; 2002ccdfe979SStefano Zampini MatMatCusparse *mmdata; 2003ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *mat; 2004ccdfe979SStefano Zampini CsrMatrix *csrmat; 2005ccdfe979SStefano Zampini 2006ccdfe979SStefano Zampini PetscFunctionBegin; 2007ccdfe979SStefano Zampini MatCheckProduct(C,1); 2008e8d2b73aSMark Adams if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data empty"); 2009ccdfe979SStefano Zampini mmdata = (MatMatCusparse*)product->data; 2010ccdfe979SStefano Zampini A = product->A; 2011ccdfe979SStefano Zampini B = product->B; 2012ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2013e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)A),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 2014ccdfe979SStefano Zampini /* currently CopyToGpu does not copy if the matrix is bound to CPU 2015ccdfe979SStefano Zampini Instead of silently accepting the wrong answer, I prefer to raise the error */ 2016ccdfe979SStefano Zampini if (A->boundtocpu) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONG,"Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 2017ccdfe979SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 2018ccdfe979SStefano Zampini cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2019ccdfe979SStefano Zampini switch (product->type) { 2020ccdfe979SStefano Zampini case MATPRODUCT_AB: 2021ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 2022ccdfe979SStefano Zampini mat = cusp->mat; 2023ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2024ccdfe979SStefano Zampini m = A->rmap->n; 2025ccdfe979SStefano Zampini n = B->cmap->n; 2026ccdfe979SStefano Zampini break; 2027ccdfe979SStefano Zampini case MATPRODUCT_AtB: 20281a2c6b5cSJunchao Zhang if (!A->form_explicit_transpose) { 2029e6e9a74fSStefano Zampini mat = cusp->mat; 2030e6e9a74fSStefano Zampini opA = CUSPARSE_OPERATION_TRANSPOSE; 2031e6e9a74fSStefano Zampini } else { 20321a2c6b5cSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTransposeForMult(A);CHKERRQ(ierr); 2033ccdfe979SStefano Zampini mat = cusp->matTranspose; 2034ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2035e6e9a74fSStefano Zampini } 2036ccdfe979SStefano Zampini m = A->cmap->n; 2037ccdfe979SStefano Zampini n = B->cmap->n; 2038ccdfe979SStefano Zampini break; 2039ccdfe979SStefano Zampini case MATPRODUCT_ABt: 2040ccdfe979SStefano Zampini case MATPRODUCT_RARt: 2041ccdfe979SStefano Zampini mat = cusp->mat; 2042ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2043ccdfe979SStefano Zampini m = A->rmap->n; 2044ccdfe979SStefano Zampini n = B->rmap->n; 2045ccdfe979SStefano Zampini break; 2046ccdfe979SStefano Zampini default: 2047e8d2b73aSMark Adams SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 2048ccdfe979SStefano Zampini } 2049e8d2b73aSMark Adams if (!mat) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 2050ccdfe979SStefano Zampini csrmat = (CsrMatrix*)mat->mat; 2051ccdfe979SStefano Zampini /* if the user passed a CPU matrix, copy the data to the GPU */ 2052ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)B,MATSEQDENSECUDA,&biscuda);CHKERRQ(ierr); 2053afb2bd1cSJunchao Zhang if (!biscuda) {ierr = MatConvert(B,MATSEQDENSECUDA,MAT_INPLACE_MATRIX,&B);CHKERRQ(ierr);} 2054ccdfe979SStefano Zampini ierr = MatDenseCUDAGetArrayRead(B,&barray);CHKERRQ(ierr); 2055afb2bd1cSJunchao Zhang 2056ccdfe979SStefano Zampini ierr = MatDenseGetLDA(B,&blda);CHKERRQ(ierr); 2057c8378d12SStefano Zampini if (product->type == MATPRODUCT_RARt || product->type == MATPRODUCT_PtAP) { 2058c8378d12SStefano Zampini ierr = MatDenseCUDAGetArrayWrite(mmdata->X,&carray);CHKERRQ(ierr); 2059c8378d12SStefano Zampini ierr = MatDenseGetLDA(mmdata->X,&clda);CHKERRQ(ierr); 2060c8378d12SStefano Zampini } else { 2061c8378d12SStefano Zampini ierr = MatDenseCUDAGetArrayWrite(C,&carray);CHKERRQ(ierr); 2062c8378d12SStefano Zampini ierr = MatDenseGetLDA(C,&clda);CHKERRQ(ierr); 2063c8378d12SStefano Zampini } 2064c8378d12SStefano Zampini 2065c8378d12SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2066afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2067afb2bd1cSJunchao Zhang cusparseOperation_t opB = (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) ? CUSPARSE_OPERATION_TRANSPOSE : CUSPARSE_OPERATION_NON_TRANSPOSE; 2068a5b23f4aSJose E. Roman /* (re)allocate mmBuffer if not initialized or LDAs are different */ 2069afb2bd1cSJunchao Zhang if (!mmdata->initialized || mmdata->Blda != blda || mmdata->Clda != clda) { 2070fcdce8c4SStefano Zampini size_t mmBufferSize; 2071afb2bd1cSJunchao Zhang if (mmdata->initialized && mmdata->Blda != blda) {stat = cusparseDestroyDnMat(mmdata->matBDescr);CHKERRCUSPARSE(stat); mmdata->matBDescr = NULL;} 2072afb2bd1cSJunchao Zhang if (!mmdata->matBDescr) { 2073afb2bd1cSJunchao Zhang stat = cusparseCreateDnMat(&mmdata->matBDescr,B->rmap->n,B->cmap->n,blda,(void*)barray,cusparse_scalartype,CUSPARSE_ORDER_COL);CHKERRCUSPARSE(stat); 2074afb2bd1cSJunchao Zhang mmdata->Blda = blda; 2075afb2bd1cSJunchao Zhang } 2076c8378d12SStefano Zampini 2077afb2bd1cSJunchao Zhang if (mmdata->initialized && mmdata->Clda != clda) {stat = cusparseDestroyDnMat(mmdata->matCDescr);CHKERRCUSPARSE(stat); mmdata->matCDescr = NULL;} 2078afb2bd1cSJunchao Zhang if (!mmdata->matCDescr) { /* matCDescr is for C or mmdata->X */ 2079afb2bd1cSJunchao Zhang stat = cusparseCreateDnMat(&mmdata->matCDescr,m,n,clda,(void*)carray,cusparse_scalartype,CUSPARSE_ORDER_COL);CHKERRCUSPARSE(stat); 2080afb2bd1cSJunchao Zhang mmdata->Clda = clda; 2081afb2bd1cSJunchao Zhang } 2082afb2bd1cSJunchao Zhang 2083afb2bd1cSJunchao Zhang if (!mat->matDescr) { 2084afb2bd1cSJunchao Zhang stat = cusparseCreateCsr(&mat->matDescr, 2085afb2bd1cSJunchao Zhang csrmat->num_rows, csrmat->num_cols, csrmat->num_entries, 2086afb2bd1cSJunchao Zhang csrmat->row_offsets->data().get(), csrmat->column_indices->data().get(), 2087afb2bd1cSJunchao Zhang csrmat->values->data().get(), 2088afb2bd1cSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, /* row offset, col idx types due to THRUSTINTARRAY32 */ 2089afb2bd1cSJunchao Zhang CUSPARSE_INDEX_BASE_ZERO,cusparse_scalartype);CHKERRCUSPARSE(stat); 2090afb2bd1cSJunchao Zhang } 2091afb2bd1cSJunchao Zhang stat = cusparseSpMM_bufferSize(cusp->handle,opA,opB,mat->alpha_one, 2092afb2bd1cSJunchao Zhang mat->matDescr,mmdata->matBDescr,mat->beta_zero, 2093afb2bd1cSJunchao Zhang mmdata->matCDescr,cusparse_scalartype, 2094fcdce8c4SStefano Zampini cusp->spmmAlg,&mmBufferSize);CHKERRCUSPARSE(stat); 2095fcdce8c4SStefano Zampini if ((mmdata->mmBuffer && mmdata->mmBufferSize < mmBufferSize) || !mmdata->mmBuffer) { 2096ee7b52eaSHong Zhang cudaError_t cerr; 2097fcdce8c4SStefano Zampini cerr = cudaFree(mmdata->mmBuffer);CHKERRCUDA(cerr); 2098fcdce8c4SStefano Zampini cerr = cudaMalloc(&mmdata->mmBuffer,mmBufferSize);CHKERRCUDA(cerr); 2099fcdce8c4SStefano Zampini mmdata->mmBufferSize = mmBufferSize; 2100fcdce8c4SStefano Zampini } 2101afb2bd1cSJunchao Zhang mmdata->initialized = PETSC_TRUE; 2102afb2bd1cSJunchao Zhang } else { 2103afb2bd1cSJunchao Zhang /* to be safe, always update pointers of the mats */ 2104afb2bd1cSJunchao Zhang stat = cusparseSpMatSetValues(mat->matDescr,csrmat->values->data().get());CHKERRCUSPARSE(stat); 2105afb2bd1cSJunchao Zhang stat = cusparseDnMatSetValues(mmdata->matBDescr,(void*)barray);CHKERRCUSPARSE(stat); 2106afb2bd1cSJunchao Zhang stat = cusparseDnMatSetValues(mmdata->matCDescr,(void*)carray);CHKERRCUSPARSE(stat); 2107afb2bd1cSJunchao Zhang } 2108afb2bd1cSJunchao Zhang 2109afb2bd1cSJunchao Zhang /* do cusparseSpMM, which supports transpose on B */ 2110afb2bd1cSJunchao Zhang stat = cusparseSpMM(cusp->handle,opA,opB,mat->alpha_one, 2111afb2bd1cSJunchao Zhang mat->matDescr,mmdata->matBDescr,mat->beta_zero, 2112afb2bd1cSJunchao Zhang mmdata->matCDescr,cusparse_scalartype, 2113fcdce8c4SStefano Zampini cusp->spmmAlg,mmdata->mmBuffer);CHKERRCUSPARSE(stat); 2114afb2bd1cSJunchao Zhang #else 2115afb2bd1cSJunchao Zhang PetscInt k; 2116afb2bd1cSJunchao Zhang /* cusparseXcsrmm does not support transpose on B */ 2117ccdfe979SStefano Zampini if (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) { 2118ccdfe979SStefano Zampini cublasHandle_t cublasv2handle; 2119ccdfe979SStefano Zampini cublasStatus_t cerr; 2120ccdfe979SStefano Zampini 2121ccdfe979SStefano Zampini ierr = PetscCUBLASGetHandle(&cublasv2handle);CHKERRQ(ierr); 2122ccdfe979SStefano Zampini cerr = cublasXgeam(cublasv2handle,CUBLAS_OP_T,CUBLAS_OP_T, 2123ccdfe979SStefano Zampini B->cmap->n,B->rmap->n, 2124ccdfe979SStefano Zampini &PETSC_CUSPARSE_ONE ,barray,blda, 2125ccdfe979SStefano Zampini &PETSC_CUSPARSE_ZERO,barray,blda, 2126ccdfe979SStefano Zampini mmdata->Bt,B->cmap->n);CHKERRCUBLAS(cerr); 2127ccdfe979SStefano Zampini blda = B->cmap->n; 2128afb2bd1cSJunchao Zhang k = B->cmap->n; 2129afb2bd1cSJunchao Zhang } else { 2130afb2bd1cSJunchao Zhang k = B->rmap->n; 2131ccdfe979SStefano Zampini } 2132ccdfe979SStefano Zampini 2133afb2bd1cSJunchao Zhang /* perform the MatMat operation, op(A) is m x k, op(B) is k x n */ 2134ccdfe979SStefano Zampini stat = cusparse_csr_spmm(cusp->handle,opA,m,n,k, 2135afb2bd1cSJunchao Zhang csrmat->num_entries,mat->alpha_one,mat->descr, 2136ccdfe979SStefano Zampini csrmat->values->data().get(), 2137ccdfe979SStefano Zampini csrmat->row_offsets->data().get(), 2138ccdfe979SStefano Zampini csrmat->column_indices->data().get(), 2139ccdfe979SStefano Zampini mmdata->Bt ? mmdata->Bt : barray,blda,mat->beta_zero, 2140ccdfe979SStefano Zampini carray,clda);CHKERRCUSPARSE(stat); 2141afb2bd1cSJunchao Zhang #endif 2142c8378d12SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2143c8378d12SStefano Zampini ierr = PetscLogGpuFlops(n*2.0*csrmat->num_entries);CHKERRQ(ierr); 2144ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayRead(B,&barray);CHKERRQ(ierr); 2145ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt) { 2146ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayWrite(mmdata->X,&carray);CHKERRQ(ierr); 2147ccdfe979SStefano Zampini ierr = MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Private(B,mmdata->X,C,PETSC_FALSE,PETSC_FALSE);CHKERRQ(ierr); 2148ccdfe979SStefano Zampini } else if (product->type == MATPRODUCT_PtAP) { 2149ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayWrite(mmdata->X,&carray);CHKERRQ(ierr); 2150ccdfe979SStefano Zampini ierr = MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Private(B,mmdata->X,C,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr); 2151ccdfe979SStefano Zampini } else { 2152ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayWrite(C,&carray);CHKERRQ(ierr); 2153ccdfe979SStefano Zampini } 2154ccdfe979SStefano Zampini if (mmdata->cisdense) { 2155ccdfe979SStefano Zampini ierr = MatConvert(C,MATSEQDENSE,MAT_INPLACE_MATRIX,&C);CHKERRQ(ierr); 2156ccdfe979SStefano Zampini } 2157ccdfe979SStefano Zampini if (!biscuda) { 2158ccdfe979SStefano Zampini ierr = MatConvert(B,MATSEQDENSE,MAT_INPLACE_MATRIX,&B);CHKERRQ(ierr); 2159ccdfe979SStefano Zampini } 2160ccdfe979SStefano Zampini PetscFunctionReturn(0); 2161ccdfe979SStefano Zampini } 2162ccdfe979SStefano Zampini 2163ccdfe979SStefano Zampini static PetscErrorCode MatProductSymbolic_SeqAIJCUSPARSE_SeqDENSECUDA(Mat C) 2164ccdfe979SStefano Zampini { 2165ccdfe979SStefano Zampini Mat_Product *product = C->product; 2166ccdfe979SStefano Zampini Mat A,B; 2167ccdfe979SStefano Zampini PetscInt m,n; 2168ccdfe979SStefano Zampini PetscBool cisdense,flg; 2169ccdfe979SStefano Zampini PetscErrorCode ierr; 2170ccdfe979SStefano Zampini MatMatCusparse *mmdata; 2171ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSE *cusp; 2172ccdfe979SStefano Zampini 2173ccdfe979SStefano Zampini PetscFunctionBegin; 2174ccdfe979SStefano Zampini MatCheckProduct(C,1); 2175e8d2b73aSMark Adams if (C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data not empty"); 2176ccdfe979SStefano Zampini A = product->A; 2177ccdfe979SStefano Zampini B = product->B; 2178ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2179e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 2180ccdfe979SStefano Zampini cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2181e8d2b73aSMark Adams if (cusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2182ccdfe979SStefano Zampini switch (product->type) { 2183ccdfe979SStefano Zampini case MATPRODUCT_AB: 2184ccdfe979SStefano Zampini m = A->rmap->n; 2185ccdfe979SStefano Zampini n = B->cmap->n; 2186ccdfe979SStefano Zampini break; 2187ccdfe979SStefano Zampini case MATPRODUCT_AtB: 2188ccdfe979SStefano Zampini m = A->cmap->n; 2189ccdfe979SStefano Zampini n = B->cmap->n; 2190ccdfe979SStefano Zampini break; 2191ccdfe979SStefano Zampini case MATPRODUCT_ABt: 2192ccdfe979SStefano Zampini m = A->rmap->n; 2193ccdfe979SStefano Zampini n = B->rmap->n; 2194ccdfe979SStefano Zampini break; 2195ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 2196ccdfe979SStefano Zampini m = B->cmap->n; 2197ccdfe979SStefano Zampini n = B->cmap->n; 2198ccdfe979SStefano Zampini break; 2199ccdfe979SStefano Zampini case MATPRODUCT_RARt: 2200ccdfe979SStefano Zampini m = B->rmap->n; 2201ccdfe979SStefano Zampini n = B->rmap->n; 2202ccdfe979SStefano Zampini break; 2203ccdfe979SStefano Zampini default: 2204e8d2b73aSMark Adams SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 2205ccdfe979SStefano Zampini } 2206ccdfe979SStefano Zampini ierr = MatSetSizes(C,m,n,m,n);CHKERRQ(ierr); 2207ccdfe979SStefano Zampini /* if C is of type MATSEQDENSE (CPU), perform the operation on the GPU and then copy on the CPU */ 2208ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)C,MATSEQDENSE,&cisdense);CHKERRQ(ierr); 2209ccdfe979SStefano Zampini ierr = MatSetType(C,MATSEQDENSECUDA);CHKERRQ(ierr); 2210ccdfe979SStefano Zampini 2211ccdfe979SStefano Zampini /* product data */ 2212ccdfe979SStefano Zampini ierr = PetscNew(&mmdata);CHKERRQ(ierr); 2213ccdfe979SStefano Zampini mmdata->cisdense = cisdense; 2214afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_LT(11,0,0) 2215afb2bd1cSJunchao Zhang /* cusparseXcsrmm does not support transpose on B, so we allocate buffer to store B^T */ 2216ccdfe979SStefano Zampini if (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) { 2217afb2bd1cSJunchao Zhang cudaError_t cerr = cudaMalloc((void**)&mmdata->Bt,(size_t)B->rmap->n*(size_t)B->cmap->n*sizeof(PetscScalar));CHKERRCUDA(cerr); 2218ccdfe979SStefano Zampini } 2219afb2bd1cSJunchao Zhang #endif 2220ccdfe979SStefano Zampini /* for these products we need intermediate storage */ 2221ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt || product->type == MATPRODUCT_PtAP) { 2222ccdfe979SStefano Zampini ierr = MatCreate(PetscObjectComm((PetscObject)C),&mmdata->X);CHKERRQ(ierr); 2223ccdfe979SStefano Zampini ierr = MatSetType(mmdata->X,MATSEQDENSECUDA);CHKERRQ(ierr); 2224ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt) { /* do not preallocate, since the first call to MatDenseCUDAGetArray will preallocate on the GPU for us */ 2225ccdfe979SStefano Zampini ierr = MatSetSizes(mmdata->X,A->rmap->n,B->rmap->n,A->rmap->n,B->rmap->n);CHKERRQ(ierr); 2226ccdfe979SStefano Zampini } else { 2227ccdfe979SStefano Zampini ierr = MatSetSizes(mmdata->X,A->rmap->n,B->cmap->n,A->rmap->n,B->cmap->n);CHKERRQ(ierr); 2228ccdfe979SStefano Zampini } 2229ccdfe979SStefano Zampini } 2230ccdfe979SStefano Zampini C->product->data = mmdata; 2231ccdfe979SStefano Zampini C->product->destroy = MatDestroy_MatMatCusparse; 2232ccdfe979SStefano Zampini 2233ccdfe979SStefano Zampini C->ops->productnumeric = MatProductNumeric_SeqAIJCUSPARSE_SeqDENSECUDA; 2234ccdfe979SStefano Zampini PetscFunctionReturn(0); 2235ccdfe979SStefano Zampini } 2236ccdfe979SStefano Zampini 2237fcdce8c4SStefano Zampini static PetscErrorCode MatProductNumeric_SeqAIJCUSPARSE_SeqAIJCUSPARSE(Mat C) 2238ccdfe979SStefano Zampini { 2239ccdfe979SStefano Zampini Mat_Product *product = C->product; 2240fcdce8c4SStefano Zampini Mat A,B; 2241fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp,*Bcusp,*Ccusp; 2242fcdce8c4SStefano Zampini Mat_SeqAIJ *c = (Mat_SeqAIJ*)C->data; 2243fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Amat,*Bmat,*Cmat; 2244fcdce8c4SStefano Zampini CsrMatrix *Acsr,*Bcsr,*Ccsr; 2245fcdce8c4SStefano Zampini PetscBool flg; 2246ccdfe979SStefano Zampini PetscErrorCode ierr; 2247fcdce8c4SStefano Zampini cusparseStatus_t stat; 2248fcdce8c4SStefano Zampini cudaError_t cerr; 2249fcdce8c4SStefano Zampini MatProductType ptype; 2250fcdce8c4SStefano Zampini MatMatCusparse *mmdata; 2251fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2252fcdce8c4SStefano Zampini cusparseSpMatDescr_t BmatSpDescr; 2253fcdce8c4SStefano Zampini #endif 2254b4285af6SJunchao Zhang cusparseOperation_t opA = CUSPARSE_OPERATION_NON_TRANSPOSE,opB = CUSPARSE_OPERATION_NON_TRANSPOSE; /* cuSPARSE spgemm doesn't support transpose yet */ 2255ccdfe979SStefano Zampini 2256ccdfe979SStefano Zampini PetscFunctionBegin; 2257ccdfe979SStefano Zampini MatCheckProduct(C,1); 2258e8d2b73aSMark Adams if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data empty"); 2259fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)C,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2260e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for C of type %s",((PetscObject)C)->type_name); 2261fcdce8c4SStefano Zampini mmdata = (MatMatCusparse*)C->product->data; 2262fcdce8c4SStefano Zampini A = product->A; 2263fcdce8c4SStefano Zampini B = product->B; 2264fcdce8c4SStefano Zampini if (mmdata->reusesym) { /* this happens when api_user is true, meaning that the matrix values have been already computed in the MatProductSymbolic phase */ 2265fcdce8c4SStefano Zampini mmdata->reusesym = PETSC_FALSE; 2266fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)C->spptr; 2267e8d2b73aSMark Adams if (Ccusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2268fcdce8c4SStefano Zampini Cmat = Ccusp->mat; 2269e8d2b73aSMark Adams if (!Cmat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C mult struct for product type %s",MatProductTypes[C->product->type]); 2270fcdce8c4SStefano Zampini Ccsr = (CsrMatrix*)Cmat->mat; 2271e8d2b73aSMark Adams if (!Ccsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C CSR struct"); 2272fcdce8c4SStefano Zampini goto finalize; 2273fcdce8c4SStefano Zampini } 2274fcdce8c4SStefano Zampini if (!c->nz) goto finalize; 2275fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2276e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 2277fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)B,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2278e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for B of type %s",((PetscObject)B)->type_name); 2279fcdce8c4SStefano Zampini if (A->boundtocpu) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_ARG_WRONG,"Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 2280fcdce8c4SStefano Zampini if (B->boundtocpu) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_ARG_WRONG,"Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 2281fcdce8c4SStefano Zampini Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2282fcdce8c4SStefano Zampini Bcusp = (Mat_SeqAIJCUSPARSE*)B->spptr; 2283fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)C->spptr; 2284e8d2b73aSMark Adams if (Acusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2285e8d2b73aSMark Adams if (Bcusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2286e8d2b73aSMark Adams if (Ccusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2287fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 2288fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 2289fcdce8c4SStefano Zampini 2290fcdce8c4SStefano Zampini ptype = product->type; 2291fcdce8c4SStefano Zampini if (A->symmetric && ptype == MATPRODUCT_AtB) ptype = MATPRODUCT_AB; 2292fcdce8c4SStefano Zampini if (B->symmetric && ptype == MATPRODUCT_ABt) ptype = MATPRODUCT_AB; 2293fcdce8c4SStefano Zampini switch (ptype) { 2294fcdce8c4SStefano Zampini case MATPRODUCT_AB: 2295fcdce8c4SStefano Zampini Amat = Acusp->mat; 2296fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2297fcdce8c4SStefano Zampini break; 2298fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 2299fcdce8c4SStefano Zampini Amat = Acusp->matTranspose; 2300fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2301fcdce8c4SStefano Zampini break; 2302fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 2303fcdce8c4SStefano Zampini Amat = Acusp->mat; 2304fcdce8c4SStefano Zampini Bmat = Bcusp->matTranspose; 2305fcdce8c4SStefano Zampini break; 2306fcdce8c4SStefano Zampini default: 2307e8d2b73aSMark Adams SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 2308fcdce8c4SStefano Zampini } 2309fcdce8c4SStefano Zampini Cmat = Ccusp->mat; 2310e8d2b73aSMark Adams if (!Amat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A mult struct for product type %s",MatProductTypes[ptype]); 2311e8d2b73aSMark Adams if (!Bmat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B mult struct for product type %s",MatProductTypes[ptype]); 2312e8d2b73aSMark Adams if (!Cmat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C mult struct for product type %s",MatProductTypes[ptype]); 2313fcdce8c4SStefano Zampini Acsr = (CsrMatrix*)Amat->mat; 2314fcdce8c4SStefano Zampini Bcsr = mmdata->Bcsr ? mmdata->Bcsr : (CsrMatrix*)Bmat->mat; /* B may be in compressed row storage */ 2315fcdce8c4SStefano Zampini Ccsr = (CsrMatrix*)Cmat->mat; 2316e8d2b73aSMark Adams if (!Acsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A CSR struct"); 2317e8d2b73aSMark Adams if (!Bcsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B CSR struct"); 2318e8d2b73aSMark Adams if (!Ccsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C CSR struct"); 2319fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2320fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2321fcdce8c4SStefano Zampini BmatSpDescr = mmdata->Bcsr ? mmdata->matSpBDescr : Bmat->matDescr; /* B may be in compressed row storage */ 2322b4285af6SJunchao Zhang stat = cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 2323b4285af6SJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,4,0) 2324b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_compute(Ccusp->handle, opA, opB, 2325b4285af6SJunchao Zhang Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2326b4285af6SJunchao Zhang cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2327b4285af6SJunchao Zhang mmdata->spgemmDesc);CHKERRCUSPARSE(stat); 2328b4285af6SJunchao Zhang #else 2329b4285af6SJunchao Zhang stat = cusparseSpGEMM_compute(Ccusp->handle, opA, opB, 2330fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2331fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2332fcdce8c4SStefano Zampini mmdata->spgemmDesc, &mmdata->mmBufferSize, mmdata->mmBuffer);CHKERRCUSPARSE(stat); 2333b4285af6SJunchao Zhang stat = cusparseSpGEMM_copy(Ccusp->handle, opA, opB, 2334fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2335fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc);CHKERRCUSPARSE(stat); 2336b4285af6SJunchao Zhang #endif 2337fcdce8c4SStefano Zampini #else 2338b4285af6SJunchao Zhang stat = cusparse_csr_spgemm(Ccusp->handle, opA, opB, 2339fcdce8c4SStefano Zampini Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, 2340fcdce8c4SStefano Zampini Amat->descr, Acsr->num_entries, Acsr->values->data().get(), Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), 2341fcdce8c4SStefano Zampini Bmat->descr, Bcsr->num_entries, Bcsr->values->data().get(), Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2342fcdce8c4SStefano Zampini Cmat->descr, Ccsr->values->data().get(), Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get());CHKERRCUSPARSE(stat); 2343fcdce8c4SStefano Zampini #endif 2344fcdce8c4SStefano Zampini ierr = PetscLogGpuFlops(mmdata->flops);CHKERRQ(ierr); 2345fcdce8c4SStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 2346fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2347fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_GPU; 2348fcdce8c4SStefano Zampini finalize: 2349fcdce8c4SStefano Zampini /* shorter version of MatAssemblyEnd_SeqAIJ */ 2350fcdce8c4SStefano Zampini ierr = PetscInfo3(C,"Matrix size: %D X %D; storage space: 0 unneeded,%D used\n",C->rmap->n,C->cmap->n,c->nz);CHKERRQ(ierr); 2351fcdce8c4SStefano Zampini ierr = PetscInfo(C,"Number of mallocs during MatSetValues() is 0\n");CHKERRQ(ierr); 2352fcdce8c4SStefano Zampini ierr = PetscInfo1(C,"Maximum nonzeros in any row is %D\n",c->rmax);CHKERRQ(ierr); 2353fcdce8c4SStefano Zampini c->reallocs = 0; 2354fcdce8c4SStefano Zampini C->info.mallocs += 0; 2355fcdce8c4SStefano Zampini C->info.nz_unneeded = 0; 2356fcdce8c4SStefano Zampini C->assembled = C->was_assembled = PETSC_TRUE; 2357fcdce8c4SStefano Zampini C->num_ass++; 2358ccdfe979SStefano Zampini PetscFunctionReturn(0); 2359ccdfe979SStefano Zampini } 2360fcdce8c4SStefano Zampini 2361fcdce8c4SStefano Zampini static PetscErrorCode MatProductSymbolic_SeqAIJCUSPARSE_SeqAIJCUSPARSE(Mat C) 2362fcdce8c4SStefano Zampini { 2363fcdce8c4SStefano Zampini Mat_Product *product = C->product; 2364fcdce8c4SStefano Zampini Mat A,B; 2365fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp,*Bcusp,*Ccusp; 2366fcdce8c4SStefano Zampini Mat_SeqAIJ *a,*b,*c; 2367fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Amat,*Bmat,*Cmat; 2368fcdce8c4SStefano Zampini CsrMatrix *Acsr,*Bcsr,*Ccsr; 2369fcdce8c4SStefano Zampini PetscInt i,j,m,n,k; 2370fcdce8c4SStefano Zampini PetscBool flg; 2371fcdce8c4SStefano Zampini PetscErrorCode ierr; 2372fcdce8c4SStefano Zampini cusparseStatus_t stat; 2373fcdce8c4SStefano Zampini cudaError_t cerr; 2374fcdce8c4SStefano Zampini MatProductType ptype; 2375fcdce8c4SStefano Zampini MatMatCusparse *mmdata; 2376fcdce8c4SStefano Zampini PetscLogDouble flops; 2377fcdce8c4SStefano Zampini PetscBool biscompressed,ciscompressed; 2378fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2379fcdce8c4SStefano Zampini int64_t C_num_rows1, C_num_cols1, C_nnz1; 2380fcdce8c4SStefano Zampini cusparseSpMatDescr_t BmatSpDescr; 2381fcdce8c4SStefano Zampini #else 2382fcdce8c4SStefano Zampini int cnz; 2383fcdce8c4SStefano Zampini #endif 2384b4285af6SJunchao Zhang cusparseOperation_t opA = CUSPARSE_OPERATION_NON_TRANSPOSE,opB = CUSPARSE_OPERATION_NON_TRANSPOSE; /* cuSPARSE spgemm doesn't support transpose yet */ 2385fcdce8c4SStefano Zampini 2386fcdce8c4SStefano Zampini PetscFunctionBegin; 2387fcdce8c4SStefano Zampini MatCheckProduct(C,1); 2388e8d2b73aSMark Adams if (C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data not empty"); 2389fcdce8c4SStefano Zampini A = product->A; 2390fcdce8c4SStefano Zampini B = product->B; 2391fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2392e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 2393fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)B,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2394e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for B of type %s",((PetscObject)B)->type_name); 2395fcdce8c4SStefano Zampini a = (Mat_SeqAIJ*)A->data; 2396fcdce8c4SStefano Zampini b = (Mat_SeqAIJ*)B->data; 2397fcdce8c4SStefano Zampini Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2398fcdce8c4SStefano Zampini Bcusp = (Mat_SeqAIJCUSPARSE*)B->spptr; 2399e8d2b73aSMark Adams if (Acusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2400e8d2b73aSMark Adams if (Bcusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2401fcdce8c4SStefano Zampini 2402fcdce8c4SStefano Zampini /* product data */ 2403fcdce8c4SStefano Zampini ierr = PetscNew(&mmdata);CHKERRQ(ierr); 2404fcdce8c4SStefano Zampini C->product->data = mmdata; 2405fcdce8c4SStefano Zampini C->product->destroy = MatDestroy_MatMatCusparse; 2406fcdce8c4SStefano Zampini 2407fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 2408fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 2409fcdce8c4SStefano Zampini ptype = product->type; 2410fcdce8c4SStefano Zampini if (A->symmetric && ptype == MATPRODUCT_AtB) ptype = MATPRODUCT_AB; 2411fcdce8c4SStefano Zampini if (B->symmetric && ptype == MATPRODUCT_ABt) ptype = MATPRODUCT_AB; 2412fcdce8c4SStefano Zampini biscompressed = PETSC_FALSE; 2413fcdce8c4SStefano Zampini ciscompressed = PETSC_FALSE; 2414fcdce8c4SStefano Zampini switch (ptype) { 2415fcdce8c4SStefano Zampini case MATPRODUCT_AB: 2416fcdce8c4SStefano Zampini m = A->rmap->n; 2417fcdce8c4SStefano Zampini n = B->cmap->n; 2418fcdce8c4SStefano Zampini k = A->cmap->n; 2419fcdce8c4SStefano Zampini Amat = Acusp->mat; 2420fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2421fcdce8c4SStefano Zampini if (a->compressedrow.use) ciscompressed = PETSC_TRUE; 2422fcdce8c4SStefano Zampini if (b->compressedrow.use) biscompressed = PETSC_TRUE; 2423fcdce8c4SStefano Zampini break; 2424fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 2425fcdce8c4SStefano Zampini m = A->cmap->n; 2426fcdce8c4SStefano Zampini n = B->cmap->n; 2427fcdce8c4SStefano Zampini k = A->rmap->n; 24281a2c6b5cSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTransposeForMult(A);CHKERRQ(ierr); 2429fcdce8c4SStefano Zampini Amat = Acusp->matTranspose; 2430fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2431fcdce8c4SStefano Zampini if (b->compressedrow.use) biscompressed = PETSC_TRUE; 2432fcdce8c4SStefano Zampini break; 2433fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 2434fcdce8c4SStefano Zampini m = A->rmap->n; 2435fcdce8c4SStefano Zampini n = B->rmap->n; 2436fcdce8c4SStefano Zampini k = A->cmap->n; 24371a2c6b5cSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTransposeForMult(B);CHKERRQ(ierr); 2438fcdce8c4SStefano Zampini Amat = Acusp->mat; 2439fcdce8c4SStefano Zampini Bmat = Bcusp->matTranspose; 2440fcdce8c4SStefano Zampini if (a->compressedrow.use) ciscompressed = PETSC_TRUE; 2441fcdce8c4SStefano Zampini break; 2442fcdce8c4SStefano Zampini default: 2443e8d2b73aSMark Adams SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 2444fcdce8c4SStefano Zampini } 2445fcdce8c4SStefano Zampini 2446fcdce8c4SStefano Zampini /* create cusparse matrix */ 2447fcdce8c4SStefano Zampini ierr = MatSetSizes(C,m,n,m,n);CHKERRQ(ierr); 2448fcdce8c4SStefano Zampini ierr = MatSetType(C,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 2449fcdce8c4SStefano Zampini c = (Mat_SeqAIJ*)C->data; 2450fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)C->spptr; 2451fcdce8c4SStefano Zampini Cmat = new Mat_SeqAIJCUSPARSEMultStruct; 2452fcdce8c4SStefano Zampini Ccsr = new CsrMatrix; 2453fcdce8c4SStefano Zampini 2454fcdce8c4SStefano Zampini c->compressedrow.use = ciscompressed; 2455fcdce8c4SStefano Zampini if (c->compressedrow.use) { /* if a is in compressed row, than c will be in compressed row format */ 2456fcdce8c4SStefano Zampini c->compressedrow.nrows = a->compressedrow.nrows; 2457fcdce8c4SStefano Zampini ierr = PetscMalloc2(c->compressedrow.nrows+1,&c->compressedrow.i,c->compressedrow.nrows,&c->compressedrow.rindex);CHKERRQ(ierr); 2458fcdce8c4SStefano Zampini ierr = PetscArraycpy(c->compressedrow.rindex,a->compressedrow.rindex,c->compressedrow.nrows);CHKERRQ(ierr); 2459fcdce8c4SStefano Zampini Ccusp->workVector = new THRUSTARRAY(c->compressedrow.nrows); 2460fcdce8c4SStefano Zampini Cmat->cprowIndices = new THRUSTINTARRAY(c->compressedrow.nrows); 2461fcdce8c4SStefano Zampini Cmat->cprowIndices->assign(c->compressedrow.rindex,c->compressedrow.rindex + c->compressedrow.nrows); 2462fcdce8c4SStefano Zampini } else { 2463fcdce8c4SStefano Zampini c->compressedrow.nrows = 0; 2464fcdce8c4SStefano Zampini c->compressedrow.i = NULL; 2465fcdce8c4SStefano Zampini c->compressedrow.rindex = NULL; 2466fcdce8c4SStefano Zampini Ccusp->workVector = NULL; 2467fcdce8c4SStefano Zampini Cmat->cprowIndices = NULL; 2468fcdce8c4SStefano Zampini } 2469fcdce8c4SStefano Zampini Ccusp->nrows = ciscompressed ? c->compressedrow.nrows : m; 2470fcdce8c4SStefano Zampini Ccusp->mat = Cmat; 2471fcdce8c4SStefano Zampini Ccusp->mat->mat = Ccsr; 2472fcdce8c4SStefano Zampini Ccsr->num_rows = Ccusp->nrows; 2473fcdce8c4SStefano Zampini Ccsr->num_cols = n; 2474fcdce8c4SStefano Zampini Ccsr->row_offsets = new THRUSTINTARRAY32(Ccusp->nrows+1); 2475fcdce8c4SStefano Zampini stat = cusparseCreateMatDescr(&Cmat->descr);CHKERRCUSPARSE(stat); 2476fcdce8c4SStefano Zampini stat = cusparseSetMatIndexBase(Cmat->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 2477fcdce8c4SStefano Zampini stat = cusparseSetMatType(Cmat->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 2478fcdce8c4SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->alpha_one),sizeof(PetscScalar));CHKERRCUDA(cerr); 2479fcdce8c4SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_zero),sizeof(PetscScalar));CHKERRCUDA(cerr); 2480fcdce8c4SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_one), sizeof(PetscScalar));CHKERRCUDA(cerr); 2481fcdce8c4SStefano Zampini cerr = cudaMemcpy(Cmat->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 2482fcdce8c4SStefano Zampini cerr = cudaMemcpy(Cmat->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 2483fcdce8c4SStefano Zampini cerr = cudaMemcpy(Cmat->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 2484fcdce8c4SStefano Zampini if (!Ccsr->num_rows || !Ccsr->num_cols || !a->nz || !b->nz) { /* cusparse raise errors in different calls when matrices have zero rows/columns! */ 2485fcdce8c4SStefano Zampini thrust::fill(thrust::device,Ccsr->row_offsets->begin(),Ccsr->row_offsets->end(),0); 2486fcdce8c4SStefano Zampini c->nz = 0; 2487fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 2488fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 2489fcdce8c4SStefano Zampini goto finalizesym; 2490fcdce8c4SStefano Zampini } 2491fcdce8c4SStefano Zampini 2492e8d2b73aSMark Adams if (!Amat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A mult struct for product type %s",MatProductTypes[ptype]); 2493e8d2b73aSMark Adams if (!Bmat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B mult struct for product type %s",MatProductTypes[ptype]); 2494fcdce8c4SStefano Zampini Acsr = (CsrMatrix*)Amat->mat; 2495fcdce8c4SStefano Zampini if (!biscompressed) { 2496fcdce8c4SStefano Zampini Bcsr = (CsrMatrix*)Bmat->mat; 2497fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2498fcdce8c4SStefano Zampini BmatSpDescr = Bmat->matDescr; 2499fcdce8c4SStefano Zampini #endif 2500fcdce8c4SStefano Zampini } else { /* we need to use row offsets for the full matrix */ 2501fcdce8c4SStefano Zampini CsrMatrix *cBcsr = (CsrMatrix*)Bmat->mat; 2502fcdce8c4SStefano Zampini Bcsr = new CsrMatrix; 2503fcdce8c4SStefano Zampini Bcsr->num_rows = B->rmap->n; 2504fcdce8c4SStefano Zampini Bcsr->num_cols = cBcsr->num_cols; 2505fcdce8c4SStefano Zampini Bcsr->num_entries = cBcsr->num_entries; 2506fcdce8c4SStefano Zampini Bcsr->column_indices = cBcsr->column_indices; 2507fcdce8c4SStefano Zampini Bcsr->values = cBcsr->values; 2508fcdce8c4SStefano Zampini if (!Bcusp->rowoffsets_gpu) { 2509fcdce8c4SStefano Zampini Bcusp->rowoffsets_gpu = new THRUSTINTARRAY32(B->rmap->n + 1); 2510fcdce8c4SStefano Zampini Bcusp->rowoffsets_gpu->assign(b->i,b->i + B->rmap->n + 1); 2511fcdce8c4SStefano Zampini ierr = PetscLogCpuToGpu((B->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 2512fcdce8c4SStefano Zampini } 2513fcdce8c4SStefano Zampini Bcsr->row_offsets = Bcusp->rowoffsets_gpu; 2514fcdce8c4SStefano Zampini mmdata->Bcsr = Bcsr; 2515fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2516fcdce8c4SStefano Zampini if (Bcsr->num_rows && Bcsr->num_cols) { 2517fcdce8c4SStefano Zampini stat = cusparseCreateCsr(&mmdata->matSpBDescr, Bcsr->num_rows, Bcsr->num_cols, Bcsr->num_entries, 2518fcdce8c4SStefano Zampini Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2519fcdce8c4SStefano Zampini Bcsr->values->data().get(), 2520fcdce8c4SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 2521fcdce8c4SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 2522fcdce8c4SStefano Zampini } 2523fcdce8c4SStefano Zampini BmatSpDescr = mmdata->matSpBDescr; 2524fcdce8c4SStefano Zampini #endif 2525fcdce8c4SStefano Zampini } 2526e8d2b73aSMark Adams if (!Acsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A CSR struct"); 2527e8d2b73aSMark Adams if (!Bcsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B CSR struct"); 2528fcdce8c4SStefano Zampini /* precompute flops count */ 2529fcdce8c4SStefano Zampini if (ptype == MATPRODUCT_AB) { 2530fcdce8c4SStefano Zampini for (i=0, flops = 0; i<A->rmap->n; i++) { 2531fcdce8c4SStefano Zampini const PetscInt st = a->i[i]; 2532fcdce8c4SStefano Zampini const PetscInt en = a->i[i+1]; 2533fcdce8c4SStefano Zampini for (j=st; j<en; j++) { 2534fcdce8c4SStefano Zampini const PetscInt brow = a->j[j]; 2535fcdce8c4SStefano Zampini flops += 2.*(b->i[brow+1] - b->i[brow]); 2536fcdce8c4SStefano Zampini } 2537fcdce8c4SStefano Zampini } 2538fcdce8c4SStefano Zampini } else if (ptype == MATPRODUCT_AtB) { 2539fcdce8c4SStefano Zampini for (i=0, flops = 0; i<A->rmap->n; i++) { 2540fcdce8c4SStefano Zampini const PetscInt anzi = a->i[i+1] - a->i[i]; 2541fcdce8c4SStefano Zampini const PetscInt bnzi = b->i[i+1] - b->i[i]; 2542fcdce8c4SStefano Zampini flops += (2.*anzi)*bnzi; 2543fcdce8c4SStefano Zampini } 2544fcdce8c4SStefano Zampini } else { /* TODO */ 2545fcdce8c4SStefano Zampini flops = 0.; 2546fcdce8c4SStefano Zampini } 2547fcdce8c4SStefano Zampini 2548fcdce8c4SStefano Zampini mmdata->flops = flops; 2549fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2550b4285af6SJunchao Zhang 2551fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2552fcdce8c4SStefano Zampini stat = cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 2553fcdce8c4SStefano Zampini stat = cusparseCreateCsr(&Cmat->matDescr, Ccsr->num_rows, Ccsr->num_cols, 0, 2554fcdce8c4SStefano Zampini NULL, NULL, NULL, 2555fcdce8c4SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 2556fcdce8c4SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 2557fcdce8c4SStefano Zampini stat = cusparseSpGEMM_createDescr(&mmdata->spgemmDesc);CHKERRCUSPARSE(stat); 2558b4285af6SJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,4,0) 2559b4285af6SJunchao Zhang { 2560b4285af6SJunchao Zhang /* cusparseSpGEMMreuse has more reasonable APIs than cusparseSpGEMM, so we prefer to use it. 2561b4285af6SJunchao Zhang We follow the sample code at https://github.com/NVIDIA/CUDALibrarySamples/blob/master/cuSPARSE/spgemm_reuse 2562b4285af6SJunchao Zhang */ 2563b4285af6SJunchao Zhang void* dBuffer1 = NULL; 2564b4285af6SJunchao Zhang void* dBuffer2 = NULL; 2565b4285af6SJunchao Zhang void* dBuffer3 = NULL; 2566b4285af6SJunchao Zhang /* dBuffer4, dBuffer5 are needed by cusparseSpGEMMreuse_compute, and therefore are stored in mmdata */ 2567b4285af6SJunchao Zhang size_t bufferSize1 = 0; 2568b4285af6SJunchao Zhang size_t bufferSize2 = 0; 2569b4285af6SJunchao Zhang size_t bufferSize3 = 0; 2570b4285af6SJunchao Zhang size_t bufferSize4 = 0; 2571b4285af6SJunchao Zhang size_t bufferSize5 = 0; 2572b4285af6SJunchao Zhang 2573b4285af6SJunchao Zhang /*----------------------------------------------------------------------*/ 2574b4285af6SJunchao Zhang /* ask bufferSize1 bytes for external memory */ 2575b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_workEstimation(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, 2576b4285af6SJunchao Zhang CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, 2577b4285af6SJunchao Zhang &bufferSize1, NULL);CHKERRCUSPARSE(stat); 2578b4285af6SJunchao Zhang cerr = cudaMalloc((void**) &dBuffer1, bufferSize1);CHKERRCUDA(cerr); 2579b4285af6SJunchao Zhang /* inspect the matrices A and B to understand the memory requirement for the next step */ 2580b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_workEstimation(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, 2581b4285af6SJunchao Zhang CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, 2582b4285af6SJunchao Zhang &bufferSize1, dBuffer1);CHKERRCUSPARSE(stat); 2583b4285af6SJunchao Zhang 2584b4285af6SJunchao Zhang /*----------------------------------------------------------------------*/ 2585b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_nnz(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, 2586b4285af6SJunchao Zhang CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, 2587b4285af6SJunchao Zhang &bufferSize2, NULL, &bufferSize3, NULL, &bufferSize4, NULL);CHKERRCUSPARSE(stat); 2588b4285af6SJunchao Zhang cerr = cudaMalloc((void**) &dBuffer2, bufferSize2);CHKERRCUDA(cerr); 2589b4285af6SJunchao Zhang cerr = cudaMalloc((void**) &dBuffer3, bufferSize3);CHKERRCUDA(cerr); 2590b4285af6SJunchao Zhang cerr = cudaMalloc((void**) &mmdata->dBuffer4, bufferSize4);CHKERRCUDA(cerr); 2591b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_nnz(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, 2592b4285af6SJunchao Zhang CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, 2593b4285af6SJunchao Zhang &bufferSize2, dBuffer2, &bufferSize3, dBuffer3, &bufferSize4, mmdata->dBuffer4);CHKERRCUSPARSE(stat); 2594b4285af6SJunchao Zhang cerr = cudaFree(dBuffer1);CHKERRCUDA(cerr); 2595b4285af6SJunchao Zhang cerr = cudaFree(dBuffer2);CHKERRCUDA(cerr); 2596b4285af6SJunchao Zhang 2597b4285af6SJunchao Zhang /*----------------------------------------------------------------------*/ 2598b4285af6SJunchao Zhang /* get matrix C non-zero entries C_nnz1 */ 2599b4285af6SJunchao Zhang stat = cusparseSpMatGetSize(Cmat->matDescr, &C_num_rows1, &C_num_cols1, &C_nnz1);CHKERRCUSPARSE(stat); 2600b4285af6SJunchao Zhang c->nz = (PetscInt) C_nnz1; 2601b4285af6SJunchao Zhang /* allocate matrix C */ 2602b4285af6SJunchao Zhang Ccsr->column_indices = new THRUSTINTARRAY32(c->nz);CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2603b4285af6SJunchao Zhang Ccsr->values = new THRUSTARRAY(c->nz);CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2604b4285af6SJunchao Zhang /* update matC with the new pointers */ 2605b4285af6SJunchao Zhang stat = cusparseCsrSetPointers(Cmat->matDescr, Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get(), 2606b4285af6SJunchao Zhang Ccsr->values->data().get());CHKERRCUSPARSE(stat); 2607b4285af6SJunchao Zhang 2608b4285af6SJunchao Zhang /*----------------------------------------------------------------------*/ 2609b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_copy(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, 2610b4285af6SJunchao Zhang CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, 2611b4285af6SJunchao Zhang &bufferSize5, NULL);CHKERRCUSPARSE(stat); 2612b4285af6SJunchao Zhang cerr = cudaMalloc((void**) &mmdata->dBuffer5, bufferSize5);CHKERRCUDA(cerr); 2613b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_copy(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, 2614b4285af6SJunchao Zhang CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, 2615b4285af6SJunchao Zhang &bufferSize5, mmdata->dBuffer5);CHKERRCUSPARSE(stat); 2616b4285af6SJunchao Zhang cerr = cudaFree(dBuffer3);CHKERRCUDA(cerr); 2617b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_compute(Ccusp->handle, opA, opB, 2618b4285af6SJunchao Zhang Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2619b4285af6SJunchao Zhang cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2620b4285af6SJunchao Zhang mmdata->spgemmDesc);CHKERRCUSPARSE(stat); 2621b4285af6SJunchao Zhang ierr = PetscInfo9(C,"Buffer sizes for type %s, result %D x %D (k %D, nzA %D, nzB %D, nzC %D) are: %ldKB %ldKB\n",MatProductTypes[ptype],m,n,k,a->nz,b->nz,c->nz,bufferSize4/1024,bufferSize5/1024);CHKERRQ(ierr); 2622b4285af6SJunchao Zhang } 2623b4285af6SJunchao Zhang #else // ~PETSC_PKG_CUDA_VERSION_GE(11,4,0) 2624b4285af6SJunchao Zhang size_t bufSize2; 2625fcdce8c4SStefano Zampini /* ask bufferSize bytes for external memory */ 2626b4285af6SJunchao Zhang stat = cusparseSpGEMM_workEstimation(Ccusp->handle, opA, opB, 2627fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2628fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2629fcdce8c4SStefano Zampini mmdata->spgemmDesc, &bufSize2, NULL);CHKERRCUSPARSE(stat); 2630bfcc3627SStefano Zampini cerr = cudaMalloc((void**) &mmdata->mmBuffer2, bufSize2);CHKERRCUDA(cerr); 2631fcdce8c4SStefano Zampini /* inspect the matrices A and B to understand the memory requirement for the next step */ 2632b4285af6SJunchao Zhang stat = cusparseSpGEMM_workEstimation(Ccusp->handle, opA, opB, 2633fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2634fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2635fcdce8c4SStefano Zampini mmdata->spgemmDesc, &bufSize2, mmdata->mmBuffer2);CHKERRCUSPARSE(stat); 2636fcdce8c4SStefano Zampini /* ask bufferSize again bytes for external memory */ 2637b4285af6SJunchao Zhang stat = cusparseSpGEMM_compute(Ccusp->handle, opA, opB, 2638fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2639fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2640fcdce8c4SStefano Zampini mmdata->spgemmDesc, &mmdata->mmBufferSize, NULL);CHKERRCUSPARSE(stat); 2641fcdce8c4SStefano Zampini /* The CUSPARSE documentation is not clear, nor the API 2642fcdce8c4SStefano Zampini We need both buffers to perform the operations properly! 2643fcdce8c4SStefano Zampini mmdata->mmBuffer2 does not appear anywhere in the compute/copy API 2644fcdce8c4SStefano Zampini it only appears for the workEstimation stuff, but it seems it is needed in compute, so probably the address 2645fcdce8c4SStefano Zampini is stored in the descriptor! What a messy API... */ 2646bfcc3627SStefano Zampini cerr = cudaMalloc((void**) &mmdata->mmBuffer, mmdata->mmBufferSize);CHKERRCUDA(cerr); 2647fcdce8c4SStefano Zampini /* compute the intermediate product of A * B */ 2648b4285af6SJunchao Zhang stat = cusparseSpGEMM_compute(Ccusp->handle, opA, opB, 2649fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2650fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2651fcdce8c4SStefano Zampini mmdata->spgemmDesc, &mmdata->mmBufferSize, mmdata->mmBuffer);CHKERRCUSPARSE(stat); 2652fcdce8c4SStefano Zampini /* get matrix C non-zero entries C_nnz1 */ 2653fcdce8c4SStefano Zampini stat = cusparseSpMatGetSize(Cmat->matDescr, &C_num_rows1, &C_num_cols1, &C_nnz1);CHKERRCUSPARSE(stat); 2654fcdce8c4SStefano Zampini c->nz = (PetscInt) C_nnz1; 265500702c57SStefano Zampini ierr = PetscInfo9(C,"Buffer sizes for type %s, result %D x %D (k %D, nzA %D, nzB %D, nzC %D) are: %ldKB %ldKB\n",MatProductTypes[ptype],m,n,k,a->nz,b->nz,c->nz,bufSize2/1024,mmdata->mmBufferSize/1024);CHKERRQ(ierr); 2656fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 2657fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2658fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 2659fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2660fcdce8c4SStefano Zampini stat = cusparseCsrSetPointers(Cmat->matDescr, Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get(), 2661fcdce8c4SStefano Zampini Ccsr->values->data().get());CHKERRCUSPARSE(stat); 2662b4285af6SJunchao Zhang stat = cusparseSpGEMM_copy(Ccusp->handle, opA, opB, 2663fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2664fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc);CHKERRCUSPARSE(stat); 2665b4285af6SJunchao Zhang #endif 2666fcdce8c4SStefano Zampini #else 2667fcdce8c4SStefano Zampini stat = cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_HOST);CHKERRCUSPARSE(stat); 2668b4285af6SJunchao Zhang stat = cusparseXcsrgemmNnz(Ccusp->handle, opA, opB, 2669fcdce8c4SStefano Zampini Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, 2670fcdce8c4SStefano Zampini Amat->descr, Acsr->num_entries, Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), 2671fcdce8c4SStefano Zampini Bmat->descr, Bcsr->num_entries, Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2672fcdce8c4SStefano Zampini Cmat->descr, Ccsr->row_offsets->data().get(), &cnz);CHKERRCUSPARSE(stat); 2673fcdce8c4SStefano Zampini c->nz = cnz; 2674fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 2675fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2676fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 2677fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2678fcdce8c4SStefano Zampini 2679fcdce8c4SStefano Zampini stat = cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 2680fcdce8c4SStefano Zampini /* with the old gemm interface (removed from 11.0 on) we cannot compute the symbolic factorization only. 2681fcdce8c4SStefano Zampini I have tried using the gemm2 interface (alpha * A * B + beta * D), which allows to do symbolic by passing NULL for values, but it seems quite buggy when 2682fcdce8c4SStefano Zampini D is NULL, despite the fact that CUSPARSE documentation claims it is supported! */ 2683b4285af6SJunchao Zhang stat = cusparse_csr_spgemm(Ccusp->handle, opA, opB, 2684fcdce8c4SStefano Zampini Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, 2685fcdce8c4SStefano Zampini Amat->descr, Acsr->num_entries, Acsr->values->data().get(), Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), 2686fcdce8c4SStefano Zampini Bmat->descr, Bcsr->num_entries, Bcsr->values->data().get(), Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2687fcdce8c4SStefano Zampini Cmat->descr, Ccsr->values->data().get(), Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get());CHKERRCUSPARSE(stat); 2688fcdce8c4SStefano Zampini #endif 2689fcdce8c4SStefano Zampini ierr = PetscLogGpuFlops(mmdata->flops);CHKERRQ(ierr); 2690fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2691fcdce8c4SStefano Zampini finalizesym: 2692fcdce8c4SStefano Zampini c->singlemalloc = PETSC_FALSE; 2693fcdce8c4SStefano Zampini c->free_a = PETSC_TRUE; 2694fcdce8c4SStefano Zampini c->free_ij = PETSC_TRUE; 2695fcdce8c4SStefano Zampini ierr = PetscMalloc1(m+1,&c->i);CHKERRQ(ierr); 2696fcdce8c4SStefano Zampini ierr = PetscMalloc1(c->nz,&c->j);CHKERRQ(ierr); 2697fcdce8c4SStefano Zampini if (PetscDefined(USE_64BIT_INDICES)) { /* 32 to 64 bit conversion on the GPU and then copy to host (lazy) */ 2698fcdce8c4SStefano Zampini PetscInt *d_i = c->i; 2699fcdce8c4SStefano Zampini THRUSTINTARRAY ii(Ccsr->row_offsets->size()); 2700fcdce8c4SStefano Zampini THRUSTINTARRAY jj(Ccsr->column_indices->size()); 2701fcdce8c4SStefano Zampini ii = *Ccsr->row_offsets; 2702fcdce8c4SStefano Zampini jj = *Ccsr->column_indices; 2703fcdce8c4SStefano Zampini if (ciscompressed) d_i = c->compressedrow.i; 2704fcdce8c4SStefano Zampini cerr = cudaMemcpy(d_i,ii.data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2705fcdce8c4SStefano Zampini cerr = cudaMemcpy(c->j,jj.data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2706fcdce8c4SStefano Zampini } else { 2707fcdce8c4SStefano Zampini PetscInt *d_i = c->i; 2708fcdce8c4SStefano Zampini if (ciscompressed) d_i = c->compressedrow.i; 2709fcdce8c4SStefano Zampini cerr = cudaMemcpy(d_i,Ccsr->row_offsets->data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2710fcdce8c4SStefano Zampini cerr = cudaMemcpy(c->j,Ccsr->column_indices->data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2711fcdce8c4SStefano Zampini } 2712fcdce8c4SStefano Zampini if (ciscompressed) { /* need to expand host row offsets */ 2713fcdce8c4SStefano Zampini PetscInt r = 0; 2714fcdce8c4SStefano Zampini c->i[0] = 0; 2715fcdce8c4SStefano Zampini for (k = 0; k < c->compressedrow.nrows; k++) { 2716fcdce8c4SStefano Zampini const PetscInt next = c->compressedrow.rindex[k]; 2717fcdce8c4SStefano Zampini const PetscInt old = c->compressedrow.i[k]; 2718fcdce8c4SStefano Zampini for (; r < next; r++) c->i[r+1] = old; 2719fcdce8c4SStefano Zampini } 2720fcdce8c4SStefano Zampini for (; r < m; r++) c->i[r+1] = c->compressedrow.i[c->compressedrow.nrows]; 2721fcdce8c4SStefano Zampini } 2722fcdce8c4SStefano Zampini ierr = PetscLogGpuToCpu((Ccsr->column_indices->size() + Ccsr->row_offsets->size())*sizeof(PetscInt));CHKERRQ(ierr); 2723fcdce8c4SStefano Zampini ierr = PetscMalloc1(m,&c->ilen);CHKERRQ(ierr); 2724fcdce8c4SStefano Zampini ierr = PetscMalloc1(m,&c->imax);CHKERRQ(ierr); 2725fcdce8c4SStefano Zampini c->maxnz = c->nz; 2726fcdce8c4SStefano Zampini c->nonzerorowcnt = 0; 2727fcdce8c4SStefano Zampini c->rmax = 0; 2728fcdce8c4SStefano Zampini for (k = 0; k < m; k++) { 2729fcdce8c4SStefano Zampini const PetscInt nn = c->i[k+1] - c->i[k]; 2730fcdce8c4SStefano Zampini c->ilen[k] = c->imax[k] = nn; 2731fcdce8c4SStefano Zampini c->nonzerorowcnt += (PetscInt)!!nn; 2732fcdce8c4SStefano Zampini c->rmax = PetscMax(c->rmax,nn); 2733fcdce8c4SStefano Zampini } 2734fcdce8c4SStefano Zampini ierr = MatMarkDiagonal_SeqAIJ(C);CHKERRQ(ierr); 2735fcdce8c4SStefano Zampini ierr = PetscMalloc1(c->nz,&c->a);CHKERRQ(ierr); 2736fcdce8c4SStefano Zampini Ccsr->num_entries = c->nz; 2737fcdce8c4SStefano Zampini 2738fcdce8c4SStefano Zampini C->nonzerostate++; 2739fcdce8c4SStefano Zampini ierr = PetscLayoutSetUp(C->rmap);CHKERRQ(ierr); 2740fcdce8c4SStefano Zampini ierr = PetscLayoutSetUp(C->cmap);CHKERRQ(ierr); 2741fcdce8c4SStefano Zampini Ccusp->nonzerostate = C->nonzerostate; 2742fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_UNALLOCATED; 2743fcdce8c4SStefano Zampini C->preallocated = PETSC_TRUE; 2744fcdce8c4SStefano Zampini C->assembled = PETSC_FALSE; 2745fcdce8c4SStefano Zampini C->was_assembled = PETSC_FALSE; 2746abb89eb1SStefano Zampini if (product->api_user && A->offloadmask == PETSC_OFFLOAD_BOTH && B->offloadmask == PETSC_OFFLOAD_BOTH) { /* flag the matrix C values as computed, so that the numeric phase will only call MatAssembly */ 2747fcdce8c4SStefano Zampini mmdata->reusesym = PETSC_TRUE; 2748fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_GPU; 2749fcdce8c4SStefano Zampini } 2750fcdce8c4SStefano Zampini C->ops->productnumeric = MatProductNumeric_SeqAIJCUSPARSE_SeqAIJCUSPARSE; 2751fcdce8c4SStefano Zampini PetscFunctionReturn(0); 2752fcdce8c4SStefano Zampini } 2753fcdce8c4SStefano Zampini 2754fcdce8c4SStefano Zampini PETSC_INTERN PetscErrorCode MatProductSetFromOptions_SeqAIJ_SeqDense(Mat); 2755fcdce8c4SStefano Zampini 2756fcdce8c4SStefano Zampini /* handles sparse or dense B */ 2757fcdce8c4SStefano Zampini static PetscErrorCode MatProductSetFromOptions_SeqAIJCUSPARSE(Mat mat) 2758fcdce8c4SStefano Zampini { 2759fcdce8c4SStefano Zampini Mat_Product *product = mat->product; 2760fcdce8c4SStefano Zampini PetscErrorCode ierr; 2761fcdce8c4SStefano Zampini PetscBool isdense = PETSC_FALSE,Biscusp = PETSC_FALSE,Ciscusp = PETSC_TRUE; 2762fcdce8c4SStefano Zampini 2763fcdce8c4SStefano Zampini PetscFunctionBegin; 2764fcdce8c4SStefano Zampini MatCheckProduct(mat,1); 2765fcdce8c4SStefano Zampini ierr = PetscObjectBaseTypeCompare((PetscObject)product->B,MATSEQDENSE,&isdense);CHKERRQ(ierr); 2766abb89eb1SStefano Zampini if (!product->A->boundtocpu && !product->B->boundtocpu) { 2767fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)product->B,MATSEQAIJCUSPARSE,&Biscusp);CHKERRQ(ierr); 2768fcdce8c4SStefano Zampini } 2769fcdce8c4SStefano Zampini if (product->type == MATPRODUCT_ABC) { 2770fcdce8c4SStefano Zampini Ciscusp = PETSC_FALSE; 2771fcdce8c4SStefano Zampini if (!product->C->boundtocpu) { 2772fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)product->C,MATSEQAIJCUSPARSE,&Ciscusp);CHKERRQ(ierr); 2773fcdce8c4SStefano Zampini } 2774fcdce8c4SStefano Zampini } 277565e4b4d4SStefano Zampini if (Biscusp && Ciscusp) { /* we can always select the CPU backend */ 277665e4b4d4SStefano Zampini PetscBool usecpu = PETSC_FALSE; 277765e4b4d4SStefano Zampini switch (product->type) { 277865e4b4d4SStefano Zampini case MATPRODUCT_AB: 277965e4b4d4SStefano Zampini if (product->api_user) { 278065e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatMatMult","Mat");CHKERRQ(ierr); 278165e4b4d4SStefano Zampini ierr = PetscOptionsBool("-matmatmult_backend_cpu","Use CPU code","MatMatMult",usecpu,&usecpu,NULL);CHKERRQ(ierr); 278265e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 278365e4b4d4SStefano Zampini } else { 278465e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatProduct_AB","Mat");CHKERRQ(ierr); 278565e4b4d4SStefano Zampini ierr = PetscOptionsBool("-matproduct_ab_backend_cpu","Use CPU code","MatMatMult",usecpu,&usecpu,NULL);CHKERRQ(ierr); 278665e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 278765e4b4d4SStefano Zampini } 278865e4b4d4SStefano Zampini break; 278965e4b4d4SStefano Zampini case MATPRODUCT_AtB: 279065e4b4d4SStefano Zampini if (product->api_user) { 279165e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatTransposeMatMult","Mat");CHKERRQ(ierr); 279265e4b4d4SStefano Zampini ierr = PetscOptionsBool("-mattransposematmult_backend_cpu","Use CPU code","MatTransposeMatMult",usecpu,&usecpu,NULL);CHKERRQ(ierr); 279365e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 279465e4b4d4SStefano Zampini } else { 279565e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatProduct_AtB","Mat");CHKERRQ(ierr); 279665e4b4d4SStefano Zampini ierr = PetscOptionsBool("-matproduct_atb_backend_cpu","Use CPU code","MatTransposeMatMult",usecpu,&usecpu,NULL);CHKERRQ(ierr); 279765e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 279865e4b4d4SStefano Zampini } 279965e4b4d4SStefano Zampini break; 280065e4b4d4SStefano Zampini case MATPRODUCT_PtAP: 280165e4b4d4SStefano Zampini if (product->api_user) { 280265e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatPtAP","Mat");CHKERRQ(ierr); 280365e4b4d4SStefano Zampini ierr = PetscOptionsBool("-matptap_backend_cpu","Use CPU code","MatPtAP",usecpu,&usecpu,NULL);CHKERRQ(ierr); 280465e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 280565e4b4d4SStefano Zampini } else { 280665e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatProduct_PtAP","Mat");CHKERRQ(ierr); 280765e4b4d4SStefano Zampini ierr = PetscOptionsBool("-matproduct_ptap_backend_cpu","Use CPU code","MatPtAP",usecpu,&usecpu,NULL);CHKERRQ(ierr); 280865e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 280965e4b4d4SStefano Zampini } 281065e4b4d4SStefano Zampini break; 281165e4b4d4SStefano Zampini case MATPRODUCT_RARt: 281265e4b4d4SStefano Zampini if (product->api_user) { 281365e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatRARt","Mat");CHKERRQ(ierr); 281465e4b4d4SStefano Zampini ierr = PetscOptionsBool("-matrart_backend_cpu","Use CPU code","MatRARt",usecpu,&usecpu,NULL);CHKERRQ(ierr); 281565e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 281665e4b4d4SStefano Zampini } else { 281765e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatProduct_RARt","Mat");CHKERRQ(ierr); 281865e4b4d4SStefano Zampini ierr = PetscOptionsBool("-matproduct_rart_backend_cpu","Use CPU code","MatRARt",usecpu,&usecpu,NULL);CHKERRQ(ierr); 281965e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 282065e4b4d4SStefano Zampini } 282165e4b4d4SStefano Zampini break; 282265e4b4d4SStefano Zampini case MATPRODUCT_ABC: 282365e4b4d4SStefano Zampini if (product->api_user) { 282465e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatMatMatMult","Mat");CHKERRQ(ierr); 282565e4b4d4SStefano Zampini ierr = PetscOptionsBool("-matmatmatmult_backend_cpu","Use CPU code","MatMatMatMult",usecpu,&usecpu,NULL);CHKERRQ(ierr); 282665e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 282765e4b4d4SStefano Zampini } else { 282865e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatProduct_ABC","Mat");CHKERRQ(ierr); 282965e4b4d4SStefano Zampini ierr = PetscOptionsBool("-matproduct_abc_backend_cpu","Use CPU code","MatMatMatMult",usecpu,&usecpu,NULL);CHKERRQ(ierr); 283065e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 283165e4b4d4SStefano Zampini } 283265e4b4d4SStefano Zampini break; 283365e4b4d4SStefano Zampini default: 283465e4b4d4SStefano Zampini break; 283565e4b4d4SStefano Zampini } 283665e4b4d4SStefano Zampini if (usecpu) Biscusp = Ciscusp = PETSC_FALSE; 283765e4b4d4SStefano Zampini } 283865e4b4d4SStefano Zampini /* dispatch */ 2839fcdce8c4SStefano Zampini if (isdense) { 2840ccdfe979SStefano Zampini switch (product->type) { 2841ccdfe979SStefano Zampini case MATPRODUCT_AB: 2842ccdfe979SStefano Zampini case MATPRODUCT_AtB: 2843ccdfe979SStefano Zampini case MATPRODUCT_ABt: 2844ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 2845ccdfe979SStefano Zampini case MATPRODUCT_RARt: 2846fcdce8c4SStefano Zampini if (product->A->boundtocpu) { 2847fcdce8c4SStefano Zampini ierr = MatProductSetFromOptions_SeqAIJ_SeqDense(mat);CHKERRQ(ierr); 2848fcdce8c4SStefano Zampini } else { 2849fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_SeqAIJCUSPARSE_SeqDENSECUDA; 2850fcdce8c4SStefano Zampini } 2851fcdce8c4SStefano Zampini break; 2852fcdce8c4SStefano Zampini case MATPRODUCT_ABC: 2853fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_ABC_Basic; 2854fcdce8c4SStefano Zampini break; 2855ccdfe979SStefano Zampini default: 2856ccdfe979SStefano Zampini break; 2857ccdfe979SStefano Zampini } 2858fcdce8c4SStefano Zampini } else if (Biscusp && Ciscusp) { 2859fcdce8c4SStefano Zampini switch (product->type) { 2860fcdce8c4SStefano Zampini case MATPRODUCT_AB: 2861fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 2862fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 2863fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_SeqAIJCUSPARSE_SeqAIJCUSPARSE; 2864fcdce8c4SStefano Zampini break; 2865fcdce8c4SStefano Zampini case MATPRODUCT_PtAP: 2866fcdce8c4SStefano Zampini case MATPRODUCT_RARt: 2867fcdce8c4SStefano Zampini case MATPRODUCT_ABC: 2868fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_ABC_Basic; 2869fcdce8c4SStefano Zampini break; 2870fcdce8c4SStefano Zampini default: 2871fcdce8c4SStefano Zampini break; 2872fcdce8c4SStefano Zampini } 2873fcdce8c4SStefano Zampini } else { /* fallback for AIJ */ 2874fcdce8c4SStefano Zampini ierr = MatProductSetFromOptions_SeqAIJ(mat);CHKERRQ(ierr); 2875fcdce8c4SStefano Zampini } 2876ccdfe979SStefano Zampini PetscFunctionReturn(0); 2877ccdfe979SStefano Zampini } 2878ccdfe979SStefano Zampini 28796fa9248bSJed Brown static PetscErrorCode MatMult_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy) 28809ae82921SPaul Mullowney { 2881b175d8bbSPaul Mullowney PetscErrorCode ierr; 28829ae82921SPaul Mullowney 28839ae82921SPaul Mullowney PetscFunctionBegin; 2884e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,NULL,yy,PETSC_FALSE,PETSC_FALSE);CHKERRQ(ierr); 2885e6e9a74fSStefano Zampini PetscFunctionReturn(0); 2886e6e9a74fSStefano Zampini } 2887e6e9a74fSStefano Zampini 2888e6e9a74fSStefano Zampini static PetscErrorCode MatMultAdd_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy, Vec zz) 2889e6e9a74fSStefano Zampini { 2890e6e9a74fSStefano Zampini PetscErrorCode ierr; 2891e6e9a74fSStefano Zampini 2892e6e9a74fSStefano Zampini PetscFunctionBegin; 2893e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,yy,zz,PETSC_FALSE,PETSC_FALSE);CHKERRQ(ierr); 2894e6e9a74fSStefano Zampini PetscFunctionReturn(0); 2895e6e9a74fSStefano Zampini } 2896e6e9a74fSStefano Zampini 2897e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTranspose_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy) 2898e6e9a74fSStefano Zampini { 2899e6e9a74fSStefano Zampini PetscErrorCode ierr; 2900e6e9a74fSStefano Zampini 2901e6e9a74fSStefano Zampini PetscFunctionBegin; 2902e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,NULL,yy,PETSC_TRUE,PETSC_TRUE);CHKERRQ(ierr); 2903e6e9a74fSStefano Zampini PetscFunctionReturn(0); 2904e6e9a74fSStefano Zampini } 2905e6e9a74fSStefano Zampini 2906e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTransposeAdd_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy,Vec zz) 2907e6e9a74fSStefano Zampini { 2908e6e9a74fSStefano Zampini PetscErrorCode ierr; 2909e6e9a74fSStefano Zampini 2910e6e9a74fSStefano Zampini PetscFunctionBegin; 2911e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,yy,zz,PETSC_TRUE,PETSC_TRUE);CHKERRQ(ierr); 29129ae82921SPaul Mullowney PetscFunctionReturn(0); 29139ae82921SPaul Mullowney } 29149ae82921SPaul Mullowney 29156fa9248bSJed Brown static PetscErrorCode MatMultTranspose_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy) 2916ca45077fSPaul Mullowney { 2917b175d8bbSPaul Mullowney PetscErrorCode ierr; 2918ca45077fSPaul Mullowney 2919ca45077fSPaul Mullowney PetscFunctionBegin; 2920e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,NULL,yy,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr); 2921ca45077fSPaul Mullowney PetscFunctionReturn(0); 2922ca45077fSPaul Mullowney } 2923ca45077fSPaul Mullowney 2924a0e72f99SJunchao Zhang __global__ static void ScatterAdd(PetscInt n, PetscInt *idx,const PetscScalar *x,PetscScalar *y) 2925a0e72f99SJunchao Zhang { 2926a0e72f99SJunchao Zhang int i = blockIdx.x*blockDim.x + threadIdx.x; 2927a0e72f99SJunchao Zhang if (i < n) y[idx[i]] += x[i]; 2928a0e72f99SJunchao Zhang } 2929a0e72f99SJunchao Zhang 2930afb2bd1cSJunchao Zhang /* z = op(A) x + y. If trans & !herm, op = ^T; if trans & herm, op = ^H; if !trans, op = no-op */ 2931e6e9a74fSStefano Zampini static PetscErrorCode MatMultAddKernel_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy,Vec zz,PetscBool trans,PetscBool herm) 29329ae82921SPaul Mullowney { 29339ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 2934aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 29359ff858a8SKarl Rupp Mat_SeqAIJCUSPARSEMultStruct *matstruct; 2936e6e9a74fSStefano Zampini PetscScalar *xarray,*zarray,*dptr,*beta,*xptr; 2937b175d8bbSPaul Mullowney PetscErrorCode ierr; 2938aa372e3fSPaul Mullowney cusparseStatus_t stat; 2939e6e9a74fSStefano Zampini cusparseOperation_t opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2940e6e9a74fSStefano Zampini PetscBool compressed; 2941afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2942afb2bd1cSJunchao Zhang PetscInt nx,ny; 2943afb2bd1cSJunchao Zhang #endif 29446e111a19SKarl Rupp 29459ae82921SPaul Mullowney PetscFunctionBegin; 2946e8d2b73aSMark Adams if (herm && !trans) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_GPU,"Hermitian and not transpose not supported"); 2947e6e9a74fSStefano Zampini if (!a->nonzerorowcnt) { 2948afb2bd1cSJunchao Zhang if (!yy) {ierr = VecSet_SeqCUDA(zz,0);CHKERRQ(ierr);} 2949d38a13f6SStefano Zampini else {ierr = VecCopy_SeqCUDA(yy,zz);CHKERRQ(ierr);} 2950e6e9a74fSStefano Zampini PetscFunctionReturn(0); 2951e6e9a74fSStefano Zampini } 295234d6c7a5SJose E. Roman /* The line below is necessary due to the operations that modify the matrix on the CPU (axpy, scale, etc) */ 295334d6c7a5SJose E. Roman ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 2954e6e9a74fSStefano Zampini if (!trans) { 29559ff858a8SKarl Rupp matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->mat; 2956e8d2b73aSMark Adams if (!matstruct) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_GPU,"SeqAIJCUSPARSE does not have a 'mat' (need to fix)"); 2957e6e9a74fSStefano Zampini } else { 29581a2c6b5cSJunchao Zhang if (herm || !A->form_explicit_transpose) { 2959e6e9a74fSStefano Zampini opA = herm ? CUSPARSE_OPERATION_CONJUGATE_TRANSPOSE : CUSPARSE_OPERATION_TRANSPOSE; 2960e6e9a74fSStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->mat; 2961e6e9a74fSStefano Zampini } else { 29621a2c6b5cSJunchao Zhang if (!cusparsestruct->matTranspose) {ierr = MatSeqAIJCUSPARSEFormExplicitTransposeForMult(A);CHKERRQ(ierr);} 2963e6e9a74fSStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->matTranspose; 2964e6e9a74fSStefano Zampini } 2965e6e9a74fSStefano Zampini } 2966e6e9a74fSStefano Zampini /* Does the matrix use compressed rows (i.e., drop zero rows)? */ 2967e6e9a74fSStefano Zampini compressed = matstruct->cprowIndices ? PETSC_TRUE : PETSC_FALSE; 2968213423ffSJunchao Zhang 2969e6e9a74fSStefano Zampini try { 2970e6e9a74fSStefano Zampini ierr = VecCUDAGetArrayRead(xx,(const PetscScalar**)&xarray);CHKERRQ(ierr); 2971213423ffSJunchao Zhang if (yy == zz) {ierr = VecCUDAGetArray(zz,&zarray);CHKERRQ(ierr);} /* read & write zz, so need to get uptodate zarray on GPU */ 2972213423ffSJunchao Zhang else {ierr = VecCUDAGetArrayWrite(zz,&zarray);CHKERRQ(ierr);} /* write zz, so no need to init zarray on GPU */ 2973afb2bd1cSJunchao Zhang 297485ba7357SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2975e6e9a74fSStefano Zampini if (opA == CUSPARSE_OPERATION_NON_TRANSPOSE) { 2976afb2bd1cSJunchao Zhang /* z = A x + beta y. 2977afb2bd1cSJunchao Zhang If A is compressed (with less rows), then Ax is shorter than the full z, so we need a work vector to store Ax. 2978afb2bd1cSJunchao Zhang When A is non-compressed, and z = y, we can set beta=1 to compute y = Ax + y in one call. 2979afb2bd1cSJunchao Zhang */ 2980e6e9a74fSStefano Zampini xptr = xarray; 2981afb2bd1cSJunchao Zhang dptr = compressed ? cusparsestruct->workVector->data().get() : zarray; 2982213423ffSJunchao Zhang beta = (yy == zz && !compressed) ? matstruct->beta_one : matstruct->beta_zero; 2983afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2984afb2bd1cSJunchao Zhang /* Get length of x, y for y=Ax. ny might be shorter than the work vector's allocated length, since the work vector is 2985afb2bd1cSJunchao Zhang allocated to accommodate different uses. So we get the length info directly from mat. 2986afb2bd1cSJunchao Zhang */ 2987afb2bd1cSJunchao Zhang if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 2988afb2bd1cSJunchao Zhang CsrMatrix *mat = (CsrMatrix*)matstruct->mat; 2989afb2bd1cSJunchao Zhang nx = mat->num_cols; 2990afb2bd1cSJunchao Zhang ny = mat->num_rows; 2991afb2bd1cSJunchao Zhang } 2992afb2bd1cSJunchao Zhang #endif 2993e6e9a74fSStefano Zampini } else { 2994afb2bd1cSJunchao Zhang /* z = A^T x + beta y 2995afb2bd1cSJunchao Zhang If A is compressed, then we need a work vector as the shorter version of x to compute A^T x. 2996afb2bd1cSJunchao Zhang Note A^Tx is of full length, so we set beta to 1.0 if y exists. 2997afb2bd1cSJunchao Zhang */ 2998afb2bd1cSJunchao Zhang xptr = compressed ? cusparsestruct->workVector->data().get() : xarray; 2999e6e9a74fSStefano Zampini dptr = zarray; 3000e6e9a74fSStefano Zampini beta = yy ? matstruct->beta_one : matstruct->beta_zero; 3001afb2bd1cSJunchao Zhang if (compressed) { /* Scatter x to work vector */ 3002e6e9a74fSStefano Zampini thrust::device_ptr<PetscScalar> xarr = thrust::device_pointer_cast(xarray); 3003a0e72f99SJunchao Zhang thrust::for_each(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(xarr, matstruct->cprowIndices->begin()))), 3004e6e9a74fSStefano Zampini thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(xarr, matstruct->cprowIndices->begin()))) + matstruct->cprowIndices->size(), 3005e6e9a74fSStefano Zampini VecCUDAEqualsReverse()); 3006e6e9a74fSStefano Zampini } 3007afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3008afb2bd1cSJunchao Zhang if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 3009afb2bd1cSJunchao Zhang CsrMatrix *mat = (CsrMatrix*)matstruct->mat; 3010afb2bd1cSJunchao Zhang nx = mat->num_rows; 3011afb2bd1cSJunchao Zhang ny = mat->num_cols; 3012afb2bd1cSJunchao Zhang } 3013afb2bd1cSJunchao Zhang #endif 3014e6e9a74fSStefano Zampini } 30159ae82921SPaul Mullowney 3016afb2bd1cSJunchao Zhang /* csr_spmv does y = alpha op(A) x + beta y */ 3017aa372e3fSPaul Mullowney if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 3018afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3019afb2bd1cSJunchao Zhang if (opA < 0 || opA > 2) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE ABI on cusparseOperation_t has changed and PETSc has not been updated accordingly"); 3020afb2bd1cSJunchao Zhang if (!matstruct->cuSpMV[opA].initialized) { /* built on demand */ 3021ee7b52eaSHong Zhang cudaError_t cerr; 3022afb2bd1cSJunchao Zhang stat = cusparseCreateDnVec(&matstruct->cuSpMV[opA].vecXDescr,nx,xptr,cusparse_scalartype);CHKERRCUSPARSE(stat); 3023afb2bd1cSJunchao Zhang stat = cusparseCreateDnVec(&matstruct->cuSpMV[opA].vecYDescr,ny,dptr,cusparse_scalartype);CHKERRCUSPARSE(stat); 3024afb2bd1cSJunchao Zhang stat = cusparseSpMV_bufferSize(cusparsestruct->handle, opA, matstruct->alpha_one, 3025afb2bd1cSJunchao Zhang matstruct->matDescr, 3026afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecXDescr, beta, 3027afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecYDescr, 3028afb2bd1cSJunchao Zhang cusparse_scalartype, 3029afb2bd1cSJunchao Zhang cusparsestruct->spmvAlg, 3030afb2bd1cSJunchao Zhang &matstruct->cuSpMV[opA].spmvBufferSize);CHKERRCUSPARSE(stat); 3031afb2bd1cSJunchao Zhang cerr = cudaMalloc(&matstruct->cuSpMV[opA].spmvBuffer,matstruct->cuSpMV[opA].spmvBufferSize);CHKERRCUDA(cerr); 3032afb2bd1cSJunchao Zhang 3033afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].initialized = PETSC_TRUE; 3034afb2bd1cSJunchao Zhang } else { 3035afb2bd1cSJunchao Zhang /* x, y's value pointers might change between calls, but their shape is kept, so we just update pointers */ 3036afb2bd1cSJunchao Zhang stat = cusparseDnVecSetValues(matstruct->cuSpMV[opA].vecXDescr,xptr);CHKERRCUSPARSE(stat); 3037afb2bd1cSJunchao Zhang stat = cusparseDnVecSetValues(matstruct->cuSpMV[opA].vecYDescr,dptr);CHKERRCUSPARSE(stat); 3038afb2bd1cSJunchao Zhang } 3039afb2bd1cSJunchao Zhang 3040afb2bd1cSJunchao Zhang stat = cusparseSpMV(cusparsestruct->handle, opA, 3041afb2bd1cSJunchao Zhang matstruct->alpha_one, 30421a2c6b5cSJunchao Zhang matstruct->matDescr, /* built in MatSeqAIJCUSPARSECopyToGPU() or MatSeqAIJCUSPARSEFormExplicitTransposeForMult() */ 3043afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecXDescr, 3044afb2bd1cSJunchao Zhang beta, 3045afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecYDescr, 3046afb2bd1cSJunchao Zhang cusparse_scalartype, 3047afb2bd1cSJunchao Zhang cusparsestruct->spmvAlg, 3048afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].spmvBuffer);CHKERRCUSPARSE(stat); 3049afb2bd1cSJunchao Zhang #else 30507656d835SStefano Zampini CsrMatrix *mat = (CsrMatrix*)matstruct->mat; 3051e6e9a74fSStefano Zampini stat = cusparse_csr_spmv(cusparsestruct->handle, opA, 3052a65300a6SPaul Mullowney mat->num_rows, mat->num_cols, 3053afb2bd1cSJunchao Zhang mat->num_entries, matstruct->alpha_one, matstruct->descr, 3054aa372e3fSPaul Mullowney mat->values->data().get(), mat->row_offsets->data().get(), 3055e6e9a74fSStefano Zampini mat->column_indices->data().get(), xptr, beta, 305657d48284SJunchao Zhang dptr);CHKERRCUSPARSE(stat); 3057afb2bd1cSJunchao Zhang #endif 3058aa372e3fSPaul Mullowney } else { 3059213423ffSJunchao Zhang if (cusparsestruct->nrows) { 3060afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3061afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 3062afb2bd1cSJunchao Zhang #else 3063301298b4SMark Adams cusparseHybMat_t hybMat = (cusparseHybMat_t)matstruct->mat; 3064e6e9a74fSStefano Zampini stat = cusparse_hyb_spmv(cusparsestruct->handle, opA, 3065afb2bd1cSJunchao Zhang matstruct->alpha_one, matstruct->descr, hybMat, 3066e6e9a74fSStefano Zampini xptr, beta, 306757d48284SJunchao Zhang dptr);CHKERRCUSPARSE(stat); 3068afb2bd1cSJunchao Zhang #endif 3069a65300a6SPaul Mullowney } 3070aa372e3fSPaul Mullowney } 3071958c4211Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3072aa372e3fSPaul Mullowney 3073e6e9a74fSStefano Zampini if (opA == CUSPARSE_OPERATION_NON_TRANSPOSE) { 3074213423ffSJunchao Zhang if (yy) { /* MatMultAdd: zz = A*xx + yy */ 3075213423ffSJunchao Zhang if (compressed) { /* A is compressed. We first copy yy to zz, then ScatterAdd the work vector to zz */ 3076213423ffSJunchao Zhang ierr = VecCopy_SeqCUDA(yy,zz);CHKERRQ(ierr); /* zz = yy */ 3077e6e9a74fSStefano Zampini } else if (zz != yy) { /* A is not compressed. zz already contains A*xx, and we just need to add yy */ 3078213423ffSJunchao Zhang ierr = VecAXPY_SeqCUDA(zz,1.0,yy);CHKERRQ(ierr); /* zz += yy */ 30797656d835SStefano Zampini } 3080213423ffSJunchao Zhang } else if (compressed) { /* MatMult: zz = A*xx. A is compressed, so we zero zz first, then ScatterAdd the work vector to zz */ 3081c1fb3f03SStefano Zampini ierr = VecSet_SeqCUDA(zz,0);CHKERRQ(ierr); 30827656d835SStefano Zampini } 30837656d835SStefano Zampini 3084213423ffSJunchao Zhang /* ScatterAdd the result from work vector into the full vector when A is compressed */ 3085213423ffSJunchao Zhang if (compressed) { 3086e6e9a74fSStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3087a0e72f99SJunchao Zhang /* I wanted to make this for_each asynchronous but failed. thrust::async::for_each() returns an event (internally registerred) 3088a0e72f99SJunchao Zhang and in the destructor of the scope, it will call cudaStreamSynchronize() on this stream. One has to store all events to 3089a0e72f99SJunchao Zhang prevent that. So I just add a ScatterAdd kernel. 3090a0e72f99SJunchao Zhang */ 3091a0e72f99SJunchao Zhang #if 0 3092a0e72f99SJunchao Zhang thrust::device_ptr<PetscScalar> zptr = thrust::device_pointer_cast(zarray); 3093a0e72f99SJunchao Zhang thrust::async::for_each(thrust::cuda::par.on(cusparsestruct->stream), 3094a0e72f99SJunchao Zhang thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(zptr, matstruct->cprowIndices->begin()))), 3095e6e9a74fSStefano Zampini thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(zptr, matstruct->cprowIndices->begin()))) + matstruct->cprowIndices->size(), 3096c41cb2e2SAlejandro Lamas Daviña VecCUDAPlusEquals()); 3097a0e72f99SJunchao Zhang #else 3098a0e72f99SJunchao Zhang PetscInt n = matstruct->cprowIndices->size(); 3099a0e72f99SJunchao Zhang ScatterAdd<<<(n+255)/256,256,0,PetscDefaultCudaStream>>>(n,matstruct->cprowIndices->data().get(),cusparsestruct->workVector->data().get(),zarray); 3100a0e72f99SJunchao Zhang #endif 3101958c4211Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3102e6e9a74fSStefano Zampini } 3103e6e9a74fSStefano Zampini } else { 3104e6e9a74fSStefano Zampini if (yy && yy != zz) { 3105e6e9a74fSStefano Zampini ierr = VecAXPY_SeqCUDA(zz,1.0,yy);CHKERRQ(ierr); /* zz += yy */ 3106e6e9a74fSStefano Zampini } 3107e6e9a74fSStefano Zampini } 3108e6e9a74fSStefano Zampini ierr = VecCUDARestoreArrayRead(xx,(const PetscScalar**)&xarray);CHKERRQ(ierr); 3109213423ffSJunchao Zhang if (yy == zz) {ierr = VecCUDARestoreArray(zz,&zarray);CHKERRQ(ierr);} 3110213423ffSJunchao Zhang else {ierr = VecCUDARestoreArrayWrite(zz,&zarray);CHKERRQ(ierr);} 31119ae82921SPaul Mullowney } catch(char *ex) { 31129ae82921SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 31139ae82921SPaul Mullowney } 3114e6e9a74fSStefano Zampini if (yy) { 3115958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*a->nz);CHKERRQ(ierr); 3116e6e9a74fSStefano Zampini } else { 3117e6e9a74fSStefano Zampini ierr = PetscLogGpuFlops(2.0*a->nz-a->nonzerorowcnt);CHKERRQ(ierr); 3118e6e9a74fSStefano Zampini } 31199ae82921SPaul Mullowney PetscFunctionReturn(0); 31209ae82921SPaul Mullowney } 31219ae82921SPaul Mullowney 31226fa9248bSJed Brown static PetscErrorCode MatMultTransposeAdd_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy,Vec zz) 3123ca45077fSPaul Mullowney { 3124b175d8bbSPaul Mullowney PetscErrorCode ierr; 31256e111a19SKarl Rupp 3126ca45077fSPaul Mullowney PetscFunctionBegin; 3127e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,yy,zz,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr); 3128ca45077fSPaul Mullowney PetscFunctionReturn(0); 3129ca45077fSPaul Mullowney } 3130ca45077fSPaul Mullowney 31316fa9248bSJed Brown static PetscErrorCode MatAssemblyEnd_SeqAIJCUSPARSE(Mat A,MatAssemblyType mode) 31329ae82921SPaul Mullowney { 31339ae82921SPaul Mullowney PetscErrorCode ierr; 3134042217e8SBarry Smith PetscObjectState onnz = A->nonzerostate; 3135042217e8SBarry Smith Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 31363fa6b06aSMark Adams 3137042217e8SBarry Smith PetscFunctionBegin; 3138042217e8SBarry Smith ierr = MatAssemblyEnd_SeqAIJ(A,mode);CHKERRQ(ierr); 3139042217e8SBarry Smith if (onnz != A->nonzerostate && cusp->deviceMat) { 3140042217e8SBarry Smith cudaError_t cerr; 3141042217e8SBarry Smith 3142042217e8SBarry Smith ierr = PetscInfo(A,"Destroy device mat since nonzerostate changed\n");CHKERRQ(ierr); 3143042217e8SBarry Smith cerr = cudaFree(cusp->deviceMat);CHKERRCUDA(cerr); 3144042217e8SBarry Smith cusp->deviceMat = NULL; 3145042217e8SBarry Smith } 31469ae82921SPaul Mullowney PetscFunctionReturn(0); 31479ae82921SPaul Mullowney } 31489ae82921SPaul Mullowney 31499ae82921SPaul Mullowney /* --------------------------------------------------------------------------------*/ 3150e057df02SPaul Mullowney /*@ 31519ae82921SPaul Mullowney MatCreateSeqAIJCUSPARSE - Creates a sparse matrix in AIJ (compressed row) format 3152e057df02SPaul Mullowney (the default parallel PETSc format). This matrix will ultimately pushed down 3153e057df02SPaul Mullowney to NVidia GPUs and use the CUSPARSE library for calculations. For good matrix 3154e057df02SPaul Mullowney assembly performance the user should preallocate the matrix storage by setting 3155e057df02SPaul Mullowney the parameter nz (or the array nnz). By setting these parameters accurately, 3156e057df02SPaul Mullowney performance during matrix assembly can be increased by more than a factor of 50. 31579ae82921SPaul Mullowney 3158d083f849SBarry Smith Collective 31599ae82921SPaul Mullowney 31609ae82921SPaul Mullowney Input Parameters: 31619ae82921SPaul Mullowney + comm - MPI communicator, set to PETSC_COMM_SELF 31629ae82921SPaul Mullowney . m - number of rows 31639ae82921SPaul Mullowney . n - number of columns 31649ae82921SPaul Mullowney . nz - number of nonzeros per row (same for all rows) 31659ae82921SPaul Mullowney - nnz - array containing the number of nonzeros in the various rows 31660298fd71SBarry Smith (possibly different for each row) or NULL 31679ae82921SPaul Mullowney 31689ae82921SPaul Mullowney Output Parameter: 31699ae82921SPaul Mullowney . A - the matrix 31709ae82921SPaul Mullowney 31719ae82921SPaul Mullowney It is recommended that one use the MatCreate(), MatSetType() and/or MatSetFromOptions(), 31729ae82921SPaul Mullowney MatXXXXSetPreallocation() paradgm instead of this routine directly. 31739ae82921SPaul Mullowney [MatXXXXSetPreallocation() is, for example, MatSeqAIJSetPreallocation] 31749ae82921SPaul Mullowney 31759ae82921SPaul Mullowney Notes: 31769ae82921SPaul Mullowney If nnz is given then nz is ignored 31779ae82921SPaul Mullowney 31789ae82921SPaul Mullowney The AIJ format (also called the Yale sparse matrix format or 31799ae82921SPaul Mullowney compressed row storage), is fully compatible with standard Fortran 77 31809ae82921SPaul Mullowney storage. That is, the stored row and column indices can begin at 31819ae82921SPaul Mullowney either one (as in Fortran) or zero. See the users' manual for details. 31829ae82921SPaul Mullowney 31839ae82921SPaul Mullowney Specify the preallocated storage with either nz or nnz (not both). 31840298fd71SBarry Smith Set nz=PETSC_DEFAULT and nnz=NULL for PETSc to control dynamic memory 31859ae82921SPaul Mullowney allocation. For large problems you MUST preallocate memory or you 31869ae82921SPaul Mullowney will get TERRIBLE performance, see the users' manual chapter on matrices. 31879ae82921SPaul Mullowney 31889ae82921SPaul Mullowney By default, this format uses inodes (identical nodes) when possible, to 31899ae82921SPaul Mullowney improve numerical efficiency of matrix-vector products and solves. We 31909ae82921SPaul Mullowney search for consecutive rows with the same nonzero structure, thereby 31919ae82921SPaul Mullowney reusing matrix information to achieve increased efficiency. 31929ae82921SPaul Mullowney 31939ae82921SPaul Mullowney Level: intermediate 31949ae82921SPaul Mullowney 3195e057df02SPaul Mullowney .seealso: MatCreate(), MatCreateAIJ(), MatSetValues(), MatSeqAIJSetColumnIndices(), MatCreateSeqAIJWithArrays(), MatCreateAIJ(), MATSEQAIJCUSPARSE, MATAIJCUSPARSE 31969ae82921SPaul Mullowney @*/ 31979ae82921SPaul Mullowney PetscErrorCode MatCreateSeqAIJCUSPARSE(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt nz,const PetscInt nnz[],Mat *A) 31989ae82921SPaul Mullowney { 31999ae82921SPaul Mullowney PetscErrorCode ierr; 32009ae82921SPaul Mullowney 32019ae82921SPaul Mullowney PetscFunctionBegin; 32029ae82921SPaul Mullowney ierr = MatCreate(comm,A);CHKERRQ(ierr); 32039ae82921SPaul Mullowney ierr = MatSetSizes(*A,m,n,m,n);CHKERRQ(ierr); 32049ae82921SPaul Mullowney ierr = MatSetType(*A,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 32059ae82921SPaul Mullowney ierr = MatSeqAIJSetPreallocation_SeqAIJ(*A,nz,(PetscInt*)nnz);CHKERRQ(ierr); 32069ae82921SPaul Mullowney PetscFunctionReturn(0); 32079ae82921SPaul Mullowney } 32089ae82921SPaul Mullowney 32096fa9248bSJed Brown static PetscErrorCode MatDestroy_SeqAIJCUSPARSE(Mat A) 32109ae82921SPaul Mullowney { 32119ae82921SPaul Mullowney PetscErrorCode ierr; 3212ab25e6cbSDominic Meiser 32139ae82921SPaul Mullowney PetscFunctionBegin; 32149ae82921SPaul Mullowney if (A->factortype == MAT_FACTOR_NONE) { 3215470880abSPatrick Sanan ierr = MatSeqAIJCUSPARSE_Destroy((Mat_SeqAIJCUSPARSE**)&A->spptr);CHKERRQ(ierr); 32169ae82921SPaul Mullowney } else { 3217470880abSPatrick Sanan ierr = MatSeqAIJCUSPARSETriFactors_Destroy((Mat_SeqAIJCUSPARSETriFactors**)&A->spptr);CHKERRQ(ierr); 3218aa372e3fSPaul Mullowney } 3219c215019aSStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJCopySubArray_C",NULL);CHKERRQ(ierr); 3220ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatCUSPARSESetFormat_C",NULL);CHKERRQ(ierr); 3221ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C",NULL);CHKERRQ(ierr); 3222ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdense_C",NULL);CHKERRQ(ierr); 3223fcdce8c4SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C",NULL);CHKERRQ(ierr); 3224ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL);CHKERRQ(ierr); 32257e8381f9SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",NULL);CHKERRQ(ierr); 32267e8381f9SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",NULL);CHKERRQ(ierr); 3227ae48a8d0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatConvert_seqaijcusparse_hypre_C",NULL);CHKERRQ(ierr); 32289ae82921SPaul Mullowney ierr = MatDestroy_SeqAIJ(A);CHKERRQ(ierr); 32299ae82921SPaul Mullowney PetscFunctionReturn(0); 32309ae82921SPaul Mullowney } 32319ae82921SPaul Mullowney 3232ccdfe979SStefano Zampini PETSC_INTERN PetscErrorCode MatConvert_SeqAIJ_SeqAIJCUSPARSE(Mat,MatType,MatReuse,Mat*); 323395639643SRichard Tran Mills static PetscErrorCode MatBindToCPU_SeqAIJCUSPARSE(Mat,PetscBool); 32349ff858a8SKarl Rupp static PetscErrorCode MatDuplicate_SeqAIJCUSPARSE(Mat A,MatDuplicateOption cpvalues,Mat *B) 32359ff858a8SKarl Rupp { 32369ff858a8SKarl Rupp PetscErrorCode ierr; 32379ff858a8SKarl Rupp 32389ff858a8SKarl Rupp PetscFunctionBegin; 32399ff858a8SKarl Rupp ierr = MatDuplicate_SeqAIJ(A,cpvalues,B);CHKERRQ(ierr); 3240ccdfe979SStefano Zampini ierr = MatConvert_SeqAIJ_SeqAIJCUSPARSE(*B,MATSEQAIJCUSPARSE,MAT_INPLACE_MATRIX,B);CHKERRQ(ierr); 32419ff858a8SKarl Rupp PetscFunctionReturn(0); 32429ff858a8SKarl Rupp } 32439ff858a8SKarl Rupp 3244039c6fbaSStefano Zampini static PetscErrorCode MatAXPY_SeqAIJCUSPARSE(Mat Y,PetscScalar a,Mat X,MatStructure str) 324595639643SRichard Tran Mills { 3246e6e9a74fSStefano Zampini PetscErrorCode ierr; 3247a587d139SMark Mat_SeqAIJ *x = (Mat_SeqAIJ*)X->data,*y = (Mat_SeqAIJ*)Y->data; 3248039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cy; 3249039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cx; 3250039c6fbaSStefano Zampini PetscScalar *ay; 3251039c6fbaSStefano Zampini const PetscScalar *ax; 3252039c6fbaSStefano Zampini CsrMatrix *csry,*csrx; 3253e6e9a74fSStefano Zampini 325495639643SRichard Tran Mills PetscFunctionBegin; 3255a49f1ed0SStefano Zampini cy = (Mat_SeqAIJCUSPARSE*)Y->spptr; 3256a49f1ed0SStefano Zampini cx = (Mat_SeqAIJCUSPARSE*)X->spptr; 3257039c6fbaSStefano Zampini if (X->ops->axpy != Y->ops->axpy) { 3258a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(Y,PETSC_FALSE);CHKERRQ(ierr); 3259a587d139SMark ierr = MatAXPY_SeqAIJ(Y,a,X,str);CHKERRQ(ierr); 3260a587d139SMark PetscFunctionReturn(0); 326195639643SRichard Tran Mills } 3262039c6fbaSStefano Zampini /* if we are here, it means both matrices are bound to GPU */ 3263a587d139SMark ierr = MatSeqAIJCUSPARSECopyToGPU(Y);CHKERRQ(ierr); 3264a587d139SMark ierr = MatSeqAIJCUSPARSECopyToGPU(X);CHKERRQ(ierr); 3265e8d2b73aSMark Adams if (cy->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)Y),PETSC_ERR_GPU,"only MAT_CUSPARSE_CSR supported"); 3266e8d2b73aSMark Adams if (cx->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)X),PETSC_ERR_GPU,"only MAT_CUSPARSE_CSR supported"); 3267039c6fbaSStefano Zampini csry = (CsrMatrix*)cy->mat->mat; 3268039c6fbaSStefano Zampini csrx = (CsrMatrix*)cx->mat->mat; 3269039c6fbaSStefano Zampini /* see if we can turn this into a cublas axpy */ 3270039c6fbaSStefano Zampini if (str != SAME_NONZERO_PATTERN && x->nz == y->nz && !x->compressedrow.use && !y->compressedrow.use) { 3271039c6fbaSStefano Zampini bool eq = thrust::equal(thrust::device,csry->row_offsets->begin(),csry->row_offsets->end(),csrx->row_offsets->begin()); 3272039c6fbaSStefano Zampini if (eq) { 3273039c6fbaSStefano Zampini eq = thrust::equal(thrust::device,csry->column_indices->begin(),csry->column_indices->end(),csrx->column_indices->begin()); 3274039c6fbaSStefano Zampini } 3275039c6fbaSStefano Zampini if (eq) str = SAME_NONZERO_PATTERN; 3276039c6fbaSStefano Zampini } 3277d2be01edSStefano Zampini /* spgeam is buggy with one column */ 3278d2be01edSStefano Zampini if (Y->cmap->n == 1 && str != SAME_NONZERO_PATTERN) str = DIFFERENT_NONZERO_PATTERN; 3279039c6fbaSStefano Zampini 3280039c6fbaSStefano Zampini if (str == SUBSET_NONZERO_PATTERN) { 3281039c6fbaSStefano Zampini cusparseStatus_t stat; 3282039c6fbaSStefano Zampini PetscScalar b = 1.0; 3283039c6fbaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3284039c6fbaSStefano Zampini size_t bufferSize; 3285039c6fbaSStefano Zampini void *buffer; 3286ee7b52eaSHong Zhang cudaError_t cerr; 3287039c6fbaSStefano Zampini #endif 3288039c6fbaSStefano Zampini 3289039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArrayRead(X,&ax);CHKERRQ(ierr); 3290039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArray(Y,&ay);CHKERRQ(ierr); 3291039c6fbaSStefano Zampini stat = cusparseSetPointerMode(cy->handle, CUSPARSE_POINTER_MODE_HOST);CHKERRCUSPARSE(stat); 3292039c6fbaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3293039c6fbaSStefano Zampini stat = cusparse_csr_spgeam_bufferSize(cy->handle,Y->rmap->n,Y->cmap->n, 3294039c6fbaSStefano Zampini &a,cx->mat->descr,x->nz,ax,csrx->row_offsets->data().get(),csrx->column_indices->data().get(), 3295039c6fbaSStefano Zampini &b,cy->mat->descr,y->nz,ay,csry->row_offsets->data().get(),csry->column_indices->data().get(), 3296039c6fbaSStefano Zampini cy->mat->descr, ay,csry->row_offsets->data().get(),csry->column_indices->data().get(),&bufferSize);CHKERRCUSPARSE(stat); 3297039c6fbaSStefano Zampini cerr = cudaMalloc(&buffer,bufferSize);CHKERRCUDA(cerr); 3298039c6fbaSStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3299039c6fbaSStefano Zampini stat = cusparse_csr_spgeam(cy->handle,Y->rmap->n,Y->cmap->n, 3300039c6fbaSStefano Zampini &a,cx->mat->descr,x->nz,ax,csrx->row_offsets->data().get(),csrx->column_indices->data().get(), 3301039c6fbaSStefano Zampini &b,cy->mat->descr,y->nz,ay,csry->row_offsets->data().get(),csry->column_indices->data().get(), 3302039c6fbaSStefano Zampini cy->mat->descr, ay,csry->row_offsets->data().get(),csry->column_indices->data().get(),buffer);CHKERRCUSPARSE(stat); 3303039c6fbaSStefano Zampini ierr = PetscLogGpuFlops(x->nz + y->nz);CHKERRQ(ierr); 3304039c6fbaSStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3305039c6fbaSStefano Zampini cerr = cudaFree(buffer);CHKERRCUDA(cerr); 3306039c6fbaSStefano Zampini #else 3307039c6fbaSStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3308039c6fbaSStefano Zampini stat = cusparse_csr_spgeam(cy->handle,Y->rmap->n,Y->cmap->n, 3309039c6fbaSStefano Zampini &a,cx->mat->descr,x->nz,ax,csrx->row_offsets->data().get(),csrx->column_indices->data().get(), 3310039c6fbaSStefano Zampini &b,cy->mat->descr,y->nz,ay,csry->row_offsets->data().get(),csry->column_indices->data().get(), 3311039c6fbaSStefano Zampini cy->mat->descr, ay,csry->row_offsets->data().get(),csry->column_indices->data().get());CHKERRCUSPARSE(stat); 3312039c6fbaSStefano Zampini ierr = PetscLogGpuFlops(x->nz + y->nz);CHKERRQ(ierr); 3313039c6fbaSStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3314039c6fbaSStefano Zampini #endif 3315039c6fbaSStefano Zampini stat = cusparseSetPointerMode(cy->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 3316039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArrayRead(X,&ax);CHKERRQ(ierr); 3317039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArray(Y,&ay);CHKERRQ(ierr); 3318039c6fbaSStefano Zampini ierr = MatSeqAIJInvalidateDiagonal(Y);CHKERRQ(ierr); 3319039c6fbaSStefano Zampini } else if (str == SAME_NONZERO_PATTERN) { 3320a587d139SMark cublasHandle_t cublasv2handle; 3321039c6fbaSStefano Zampini cublasStatus_t berr; 3322a587d139SMark PetscBLASInt one = 1, bnz = 1; 3323039c6fbaSStefano Zampini 3324039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArrayRead(X,&ax);CHKERRQ(ierr); 3325039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArray(Y,&ay);CHKERRQ(ierr); 3326a587d139SMark ierr = PetscCUBLASGetHandle(&cublasv2handle);CHKERRQ(ierr); 3327a587d139SMark ierr = PetscBLASIntCast(x->nz,&bnz);CHKERRQ(ierr); 3328a587d139SMark ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3329039c6fbaSStefano Zampini berr = cublasXaxpy(cublasv2handle,bnz,&a,ax,one,ay,one);CHKERRCUBLAS(berr); 3330a587d139SMark ierr = PetscLogGpuFlops(2.0*bnz);CHKERRQ(ierr); 3331a587d139SMark ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3332039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArrayRead(X,&ax);CHKERRQ(ierr); 3333039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArray(Y,&ay);CHKERRQ(ierr); 3334a587d139SMark ierr = MatSeqAIJInvalidateDiagonal(Y);CHKERRQ(ierr); 3335039c6fbaSStefano Zampini } else { 3336a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(Y,PETSC_FALSE);CHKERRQ(ierr); 3337d2be01edSStefano Zampini ierr = MatAXPY_SeqAIJ(Y,a,X,str);CHKERRQ(ierr); 3338a587d139SMark } 333995639643SRichard Tran Mills PetscFunctionReturn(0); 334095639643SRichard Tran Mills } 334195639643SRichard Tran Mills 334233c9ba73SStefano Zampini static PetscErrorCode MatScale_SeqAIJCUSPARSE(Mat Y,PetscScalar a) 334333c9ba73SStefano Zampini { 334433c9ba73SStefano Zampini PetscErrorCode ierr; 334533c9ba73SStefano Zampini Mat_SeqAIJ *y = (Mat_SeqAIJ*)Y->data; 334633c9ba73SStefano Zampini PetscScalar *ay; 334733c9ba73SStefano Zampini cublasHandle_t cublasv2handle; 334833c9ba73SStefano Zampini cublasStatus_t berr; 334933c9ba73SStefano Zampini PetscBLASInt one = 1, bnz = 1; 335033c9ba73SStefano Zampini 335133c9ba73SStefano Zampini PetscFunctionBegin; 335233c9ba73SStefano Zampini ierr = MatSeqAIJCUSPARSEGetArray(Y,&ay);CHKERRQ(ierr); 335333c9ba73SStefano Zampini ierr = PetscCUBLASGetHandle(&cublasv2handle);CHKERRQ(ierr); 335433c9ba73SStefano Zampini ierr = PetscBLASIntCast(y->nz,&bnz);CHKERRQ(ierr); 335533c9ba73SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 335633c9ba73SStefano Zampini berr = cublasXscal(cublasv2handle,bnz,&a,ay,one);CHKERRCUBLAS(berr); 335733c9ba73SStefano Zampini ierr = PetscLogGpuFlops(bnz);CHKERRQ(ierr); 335833c9ba73SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 335933c9ba73SStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArray(Y,&ay);CHKERRQ(ierr); 336033c9ba73SStefano Zampini ierr = MatSeqAIJInvalidateDiagonal(Y);CHKERRQ(ierr); 336133c9ba73SStefano Zampini PetscFunctionReturn(0); 336233c9ba73SStefano Zampini } 336333c9ba73SStefano Zampini 33643fa6b06aSMark Adams static PetscErrorCode MatZeroEntries_SeqAIJCUSPARSE(Mat A) 33653fa6b06aSMark Adams { 33663fa6b06aSMark Adams PetscErrorCode ierr; 33677e8381f9SStefano Zampini PetscBool both = PETSC_FALSE; 3368a587d139SMark Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 33697e8381f9SStefano Zampini 33703fa6b06aSMark Adams PetscFunctionBegin; 33713fa6b06aSMark Adams if (A->factortype == MAT_FACTOR_NONE) { 33723fa6b06aSMark Adams Mat_SeqAIJCUSPARSE *spptr = (Mat_SeqAIJCUSPARSE*)A->spptr; 33737e8381f9SStefano Zampini if (spptr->mat) { 33747e8381f9SStefano Zampini CsrMatrix* matrix = (CsrMatrix*)spptr->mat->mat; 33757e8381f9SStefano Zampini if (matrix->values) { 33767e8381f9SStefano Zampini both = PETSC_TRUE; 33777e8381f9SStefano Zampini thrust::fill(thrust::device,matrix->values->begin(),matrix->values->end(),0.); 33787e8381f9SStefano Zampini } 33797e8381f9SStefano Zampini } 33807e8381f9SStefano Zampini if (spptr->matTranspose) { 33817e8381f9SStefano Zampini CsrMatrix* matrix = (CsrMatrix*)spptr->matTranspose->mat; 33827e8381f9SStefano Zampini if (matrix->values) { 33837e8381f9SStefano Zampini thrust::fill(thrust::device,matrix->values->begin(),matrix->values->end(),0.); 33847e8381f9SStefano Zampini } 33857e8381f9SStefano Zampini } 33863fa6b06aSMark Adams } 3387a587d139SMark //ierr = MatZeroEntries_SeqAIJ(A);CHKERRQ(ierr); 3388a587d139SMark ierr = PetscArrayzero(a->a,a->i[A->rmap->n]);CHKERRQ(ierr); 3389a587d139SMark ierr = MatSeqAIJInvalidateDiagonal(A);CHKERRQ(ierr); 33907e8381f9SStefano Zampini if (both) A->offloadmask = PETSC_OFFLOAD_BOTH; 3391a587d139SMark else A->offloadmask = PETSC_OFFLOAD_CPU; 33923fa6b06aSMark Adams PetscFunctionReturn(0); 33933fa6b06aSMark Adams } 33943fa6b06aSMark Adams 3395a587d139SMark static PetscErrorCode MatBindToCPU_SeqAIJCUSPARSE(Mat A,PetscBool flg) 3396a587d139SMark { 3397a587d139SMark Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 3398a587d139SMark PetscErrorCode ierr; 3399a587d139SMark 3400a587d139SMark PetscFunctionBegin; 3401a587d139SMark if (A->factortype != MAT_FACTOR_NONE) PetscFunctionReturn(0); 3402a587d139SMark if (flg) { 3403a587d139SMark ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 3404a587d139SMark 340533c9ba73SStefano Zampini A->ops->scale = MatScale_SeqAIJ; 3406a587d139SMark A->ops->axpy = MatAXPY_SeqAIJ; 3407a587d139SMark A->ops->zeroentries = MatZeroEntries_SeqAIJ; 3408a587d139SMark A->ops->mult = MatMult_SeqAIJ; 3409a587d139SMark A->ops->multadd = MatMultAdd_SeqAIJ; 3410a587d139SMark A->ops->multtranspose = MatMultTranspose_SeqAIJ; 3411a587d139SMark A->ops->multtransposeadd = MatMultTransposeAdd_SeqAIJ; 3412a587d139SMark A->ops->multhermitiantranspose = NULL; 3413a587d139SMark A->ops->multhermitiantransposeadd = NULL; 3414fcdce8c4SStefano Zampini A->ops->productsetfromoptions = MatProductSetFromOptions_SeqAIJ; 3415c215019aSStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJCopySubArray_C",NULL);CHKERRQ(ierr); 3416a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C",NULL);CHKERRQ(ierr); 3417a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdense_C",NULL);CHKERRQ(ierr); 3418a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",NULL);CHKERRQ(ierr); 3419a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",NULL);CHKERRQ(ierr); 3420a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJGetArray_C",MatSeqAIJGetArray_SeqAIJ);CHKERRQ(ierr); 3421fcdce8c4SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C",NULL);CHKERRQ(ierr); 3422a587d139SMark } else { 342333c9ba73SStefano Zampini A->ops->scale = MatScale_SeqAIJCUSPARSE; 3424a587d139SMark A->ops->axpy = MatAXPY_SeqAIJCUSPARSE; 3425a587d139SMark A->ops->zeroentries = MatZeroEntries_SeqAIJCUSPARSE; 3426a587d139SMark A->ops->mult = MatMult_SeqAIJCUSPARSE; 3427a587d139SMark A->ops->multadd = MatMultAdd_SeqAIJCUSPARSE; 3428a587d139SMark A->ops->multtranspose = MatMultTranspose_SeqAIJCUSPARSE; 3429a587d139SMark A->ops->multtransposeadd = MatMultTransposeAdd_SeqAIJCUSPARSE; 3430a587d139SMark A->ops->multhermitiantranspose = MatMultHermitianTranspose_SeqAIJCUSPARSE; 3431a587d139SMark A->ops->multhermitiantransposeadd = MatMultHermitianTransposeAdd_SeqAIJCUSPARSE; 3432fcdce8c4SStefano Zampini A->ops->productsetfromoptions = MatProductSetFromOptions_SeqAIJCUSPARSE; 3433c215019aSStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJCopySubArray_C",MatSeqAIJCopySubArray_SeqAIJCUSPARSE);CHKERRQ(ierr); 3434a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C",MatProductSetFromOptions_SeqAIJCUSPARSE);CHKERRQ(ierr); 3435a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdense_C",MatProductSetFromOptions_SeqAIJCUSPARSE);CHKERRQ(ierr); 3436a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",MatSetPreallocationCOO_SeqAIJCUSPARSE);CHKERRQ(ierr); 3437a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",MatSetValuesCOO_SeqAIJCUSPARSE);CHKERRQ(ierr); 3438a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJGetArray_C",MatSeqAIJGetArray_SeqAIJCUSPARSE);CHKERRQ(ierr); 3439fcdce8c4SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C",MatProductSetFromOptions_SeqAIJCUSPARSE);CHKERRQ(ierr); 3440a587d139SMark } 3441a587d139SMark A->boundtocpu = flg; 3442a587d139SMark a->inode.use = flg; 3443a587d139SMark PetscFunctionReturn(0); 3444a587d139SMark } 3445a587d139SMark 344649735bf3SStefano Zampini PETSC_INTERN PetscErrorCode MatConvert_SeqAIJ_SeqAIJCUSPARSE(Mat A, MatType mtype, MatReuse reuse, Mat* newmat) 34479ae82921SPaul Mullowney { 34489ae82921SPaul Mullowney PetscErrorCode ierr; 3449aa372e3fSPaul Mullowney cusparseStatus_t stat; 345049735bf3SStefano Zampini Mat B; 34519ae82921SPaul Mullowney 34529ae82921SPaul Mullowney PetscFunctionBegin; 3453*a4af0ceeSJacob Faibussowitsch ierr = PetscDeviceInitialize(PETSC_DEVICE_CUDA);CHKERRQ(ierr); /* first use of CUSPARSE may be via MatConvert */ 345449735bf3SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 345549735bf3SStefano Zampini ierr = MatDuplicate(A,MAT_COPY_VALUES,newmat);CHKERRQ(ierr); 345649735bf3SStefano Zampini } else if (reuse == MAT_REUSE_MATRIX) { 345749735bf3SStefano Zampini ierr = MatCopy(A,*newmat,SAME_NONZERO_PATTERN);CHKERRQ(ierr); 345849735bf3SStefano Zampini } 345949735bf3SStefano Zampini B = *newmat; 346049735bf3SStefano Zampini 346134136279SStefano Zampini ierr = PetscFree(B->defaultvectype);CHKERRQ(ierr); 346234136279SStefano Zampini ierr = PetscStrallocpy(VECCUDA,&B->defaultvectype);CHKERRQ(ierr); 346334136279SStefano Zampini 346449735bf3SStefano Zampini if (reuse != MAT_REUSE_MATRIX && !B->spptr) { 34659ae82921SPaul Mullowney if (B->factortype == MAT_FACTOR_NONE) { 3466e6e9a74fSStefano Zampini Mat_SeqAIJCUSPARSE *spptr; 3467e6e9a74fSStefano Zampini ierr = PetscNew(&spptr);CHKERRQ(ierr); 3468e6e9a74fSStefano Zampini stat = cusparseCreate(&spptr->handle);CHKERRCUSPARSE(stat); 3469a0e72f99SJunchao Zhang stat = cusparseSetStream(spptr->handle,PetscDefaultCudaStream);CHKERRCUSPARSE(stat); 34701a2c6b5cSJunchao Zhang spptr->format = MAT_CUSPARSE_CSR; 3471d8132acaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3472a435da06SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,4,0) 3473a435da06SStefano Zampini spptr->spmvAlg = CUSPARSE_SPMV_CSR_ALG1; /* default, since we only support csr */ 3474a435da06SStefano Zampini #else 3475d8132acaSStefano Zampini spptr->spmvAlg = CUSPARSE_CSRMV_ALG1; /* default, since we only support csr */ 3476a435da06SStefano Zampini #endif 3477d8132acaSStefano Zampini spptr->spmmAlg = CUSPARSE_SPMM_CSR_ALG1; /* default, only support column-major dense matrix B */ 3478d8132acaSStefano Zampini spptr->csr2cscAlg = CUSPARSE_CSR2CSC_ALG1; 3479d8132acaSStefano Zampini #endif 34801a2c6b5cSJunchao Zhang B->spptr = spptr; 34819ae82921SPaul Mullowney } else { 3482e6e9a74fSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *spptr; 3483e6e9a74fSStefano Zampini 3484e6e9a74fSStefano Zampini ierr = PetscNew(&spptr);CHKERRQ(ierr); 3485e6e9a74fSStefano Zampini stat = cusparseCreate(&spptr->handle);CHKERRCUSPARSE(stat); 3486a0e72f99SJunchao Zhang stat = cusparseSetStream(spptr->handle,PetscDefaultCudaStream);CHKERRCUSPARSE(stat); 3487e6e9a74fSStefano Zampini B->spptr = spptr; 34889ae82921SPaul Mullowney } 3489e6e9a74fSStefano Zampini B->offloadmask = PETSC_OFFLOAD_UNALLOCATED; 349049735bf3SStefano Zampini } 3491693b0035SStefano Zampini B->ops->assemblyend = MatAssemblyEnd_SeqAIJCUSPARSE; 34929ae82921SPaul Mullowney B->ops->destroy = MatDestroy_SeqAIJCUSPARSE; 34931a2c6b5cSJunchao Zhang B->ops->setoption = MatSetOption_SeqAIJCUSPARSE; 34949ae82921SPaul Mullowney B->ops->setfromoptions = MatSetFromOptions_SeqAIJCUSPARSE; 349595639643SRichard Tran Mills B->ops->bindtocpu = MatBindToCPU_SeqAIJCUSPARSE; 3496693b0035SStefano Zampini B->ops->duplicate = MatDuplicate_SeqAIJCUSPARSE; 34972205254eSKarl Rupp 3498e6e9a74fSStefano Zampini ierr = MatBindToCPU_SeqAIJCUSPARSE(B,PETSC_FALSE);CHKERRQ(ierr); 34999ae82921SPaul Mullowney ierr = PetscObjectChangeTypeName((PetscObject)B,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 3500bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatCUSPARSESetFormat_C",MatCUSPARSESetFormat_SeqAIJCUSPARSE);CHKERRQ(ierr); 3501ae48a8d0SStefano Zampini #if defined(PETSC_HAVE_HYPRE) 3502ae48a8d0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_seqaijcusparse_hypre_C",MatConvert_AIJ_HYPRE);CHKERRQ(ierr); 3503ae48a8d0SStefano Zampini #endif 35049ae82921SPaul Mullowney PetscFunctionReturn(0); 35059ae82921SPaul Mullowney } 35069ae82921SPaul Mullowney 350702fe1965SBarry Smith PETSC_EXTERN PetscErrorCode MatCreate_SeqAIJCUSPARSE(Mat B) 350802fe1965SBarry Smith { 350902fe1965SBarry Smith PetscErrorCode ierr; 351002fe1965SBarry Smith 351102fe1965SBarry Smith PetscFunctionBegin; 351202fe1965SBarry Smith ierr = MatCreate_SeqAIJ(B);CHKERRQ(ierr); 35130ce8acdeSStefano Zampini ierr = MatConvert_SeqAIJ_SeqAIJCUSPARSE(B,MATSEQAIJCUSPARSE,MAT_INPLACE_MATRIX,&B);CHKERRQ(ierr); 351402fe1965SBarry Smith PetscFunctionReturn(0); 351502fe1965SBarry Smith } 351602fe1965SBarry Smith 35173ca39a21SBarry Smith /*MC 3518e057df02SPaul Mullowney MATSEQAIJCUSPARSE - MATAIJCUSPARSE = "(seq)aijcusparse" - A matrix type to be used for sparse matrices. 3519e057df02SPaul Mullowney 3520e057df02SPaul Mullowney A matrix type type whose data resides on Nvidia GPUs. These matrices can be in either 35212692e278SPaul Mullowney CSR, ELL, or Hybrid format. The ELL and HYB formats require CUDA 4.2 or later. 35222692e278SPaul Mullowney All matrix calculations are performed on Nvidia GPUs using the CUSPARSE library. 3523e057df02SPaul Mullowney 3524e057df02SPaul Mullowney Options Database Keys: 3525e057df02SPaul Mullowney + -mat_type aijcusparse - sets the matrix type to "seqaijcusparse" during a call to MatSetFromOptions() 3526aa372e3fSPaul Mullowney . -mat_cusparse_storage_format csr - sets the storage format of matrices (for MatMult and factors in MatSolve) during a call to MatSetFromOptions(). Other options include ell (ellpack) or hyb (hybrid). 3527a2b725a8SWilliam Gropp - -mat_cusparse_mult_storage_format csr - sets the storage format of matrices (for MatMult) during a call to MatSetFromOptions(). Other options include ell (ellpack) or hyb (hybrid). 3528e057df02SPaul Mullowney 3529e057df02SPaul Mullowney Level: beginner 3530e057df02SPaul Mullowney 35318468deeeSKarl Rupp .seealso: MatCreateSeqAIJCUSPARSE(), MATAIJCUSPARSE, MatCreateAIJCUSPARSE(), MatCUSPARSESetFormat(), MatCUSPARSEStorageFormat, MatCUSPARSEFormatOperation 3532e057df02SPaul Mullowney M*/ 35337f756511SDominic Meiser 3534bddcd29dSMark Adams PETSC_EXTERN PetscErrorCode MatGetFactor_seqaijcusparse_cusparse_band(Mat,MatFactorType,Mat*); 35350f39cd5aSBarry Smith 35363ca39a21SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_CUSPARSE(void) 353742c9c57cSBarry Smith { 353842c9c57cSBarry Smith PetscErrorCode ierr; 353942c9c57cSBarry Smith 354042c9c57cSBarry Smith PetscFunctionBegin; 3541bddcd29dSMark Adams ierr = MatSolverTypeRegister(MATSOLVERCUSPARSEBAND, MATSEQAIJ, MAT_FACTOR_LU,MatGetFactor_seqaijcusparse_cusparse_band);CHKERRQ(ierr); 35423ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_LU,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 35433ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_CHOLESKY,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 35443ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_ILU,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 35453ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_ICC,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 3546bddcd29dSMark Adams 354742c9c57cSBarry Smith PetscFunctionReturn(0); 354842c9c57cSBarry Smith } 354929b38603SBarry Smith 3550470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSE_Destroy(Mat_SeqAIJCUSPARSE **cusparsestruct) 35517f756511SDominic Meiser { 3552e6e9a74fSStefano Zampini PetscErrorCode ierr; 35537f756511SDominic Meiser cusparseStatus_t stat; 35547f756511SDominic Meiser 35557f756511SDominic Meiser PetscFunctionBegin; 35567f756511SDominic Meiser if (*cusparsestruct) { 3557e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*cusparsestruct)->mat,(*cusparsestruct)->format);CHKERRQ(ierr); 3558e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*cusparsestruct)->matTranspose,(*cusparsestruct)->format);CHKERRQ(ierr); 35597f756511SDominic Meiser delete (*cusparsestruct)->workVector; 356081902715SJunchao Zhang delete (*cusparsestruct)->rowoffsets_gpu; 35617e8381f9SStefano Zampini delete (*cusparsestruct)->cooPerm; 35627e8381f9SStefano Zampini delete (*cusparsestruct)->cooPerm_a; 3563a49f1ed0SStefano Zampini delete (*cusparsestruct)->csr2csc_i; 35647e8381f9SStefano Zampini if ((*cusparsestruct)->handle) {stat = cusparseDestroy((*cusparsestruct)->handle);CHKERRCUSPARSE(stat);} 3565e6e9a74fSStefano Zampini ierr = PetscFree(*cusparsestruct);CHKERRQ(ierr); 35667f756511SDominic Meiser } 35677f756511SDominic Meiser PetscFunctionReturn(0); 35687f756511SDominic Meiser } 35697f756511SDominic Meiser 35707f756511SDominic Meiser static PetscErrorCode CsrMatrix_Destroy(CsrMatrix **mat) 35717f756511SDominic Meiser { 35727f756511SDominic Meiser PetscFunctionBegin; 35737f756511SDominic Meiser if (*mat) { 35747f756511SDominic Meiser delete (*mat)->values; 35757f756511SDominic Meiser delete (*mat)->column_indices; 35767f756511SDominic Meiser delete (*mat)->row_offsets; 35777f756511SDominic Meiser delete *mat; 35787f756511SDominic Meiser *mat = 0; 35797f756511SDominic Meiser } 35807f756511SDominic Meiser PetscFunctionReturn(0); 35817f756511SDominic Meiser } 35827f756511SDominic Meiser 3583470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSETriFactorStruct **trifactor) 35847f756511SDominic Meiser { 35857f756511SDominic Meiser cusparseStatus_t stat; 35867f756511SDominic Meiser PetscErrorCode ierr; 35877f756511SDominic Meiser 35887f756511SDominic Meiser PetscFunctionBegin; 35897f756511SDominic Meiser if (*trifactor) { 359057d48284SJunchao Zhang if ((*trifactor)->descr) { stat = cusparseDestroyMatDescr((*trifactor)->descr);CHKERRCUSPARSE(stat); } 3591afb2bd1cSJunchao Zhang if ((*trifactor)->solveInfo) { stat = cusparse_destroy_analysis_info((*trifactor)->solveInfo);CHKERRCUSPARSE(stat); } 35927f756511SDominic Meiser ierr = CsrMatrix_Destroy(&(*trifactor)->csrMat);CHKERRQ(ierr); 35931b0a6780SStefano Zampini if ((*trifactor)->solveBuffer) {cudaError_t cerr = cudaFree((*trifactor)->solveBuffer);CHKERRCUDA(cerr);} 35942cbc15d9SMark if ((*trifactor)->AA_h) {cudaError_t cerr = cudaFreeHost((*trifactor)->AA_h);CHKERRCUDA(cerr);} 3595afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 35961b0a6780SStefano Zampini if ((*trifactor)->csr2cscBuffer) {cudaError_t cerr = cudaFree((*trifactor)->csr2cscBuffer);CHKERRCUDA(cerr);} 3597afb2bd1cSJunchao Zhang #endif 3598da79fbbcSStefano Zampini ierr = PetscFree(*trifactor);CHKERRQ(ierr); 35997f756511SDominic Meiser } 36007f756511SDominic Meiser PetscFunctionReturn(0); 36017f756511SDominic Meiser } 36027f756511SDominic Meiser 3603470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSEMultStruct **matstruct,MatCUSPARSEStorageFormat format) 36047f756511SDominic Meiser { 36057f756511SDominic Meiser CsrMatrix *mat; 36067f756511SDominic Meiser cusparseStatus_t stat; 36077f756511SDominic Meiser cudaError_t err; 36087f756511SDominic Meiser 36097f756511SDominic Meiser PetscFunctionBegin; 36107f756511SDominic Meiser if (*matstruct) { 36117f756511SDominic Meiser if ((*matstruct)->mat) { 36127f756511SDominic Meiser if (format==MAT_CUSPARSE_ELL || format==MAT_CUSPARSE_HYB) { 3613afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3614afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 3615afb2bd1cSJunchao Zhang #else 36167f756511SDominic Meiser cusparseHybMat_t hybMat = (cusparseHybMat_t)(*matstruct)->mat; 361757d48284SJunchao Zhang stat = cusparseDestroyHybMat(hybMat);CHKERRCUSPARSE(stat); 3618afb2bd1cSJunchao Zhang #endif 36197f756511SDominic Meiser } else { 36207f756511SDominic Meiser mat = (CsrMatrix*)(*matstruct)->mat; 36217f756511SDominic Meiser CsrMatrix_Destroy(&mat); 36227f756511SDominic Meiser } 36237f756511SDominic Meiser } 362457d48284SJunchao Zhang if ((*matstruct)->descr) { stat = cusparseDestroyMatDescr((*matstruct)->descr);CHKERRCUSPARSE(stat); } 36257f756511SDominic Meiser delete (*matstruct)->cprowIndices; 3626afb2bd1cSJunchao Zhang if ((*matstruct)->alpha_one) { err=cudaFree((*matstruct)->alpha_one);CHKERRCUDA(err); } 36277656d835SStefano Zampini if ((*matstruct)->beta_zero) { err=cudaFree((*matstruct)->beta_zero);CHKERRCUDA(err); } 36287656d835SStefano Zampini if ((*matstruct)->beta_one) { err=cudaFree((*matstruct)->beta_one);CHKERRCUDA(err); } 3629afb2bd1cSJunchao Zhang 3630afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3631afb2bd1cSJunchao Zhang Mat_SeqAIJCUSPARSEMultStruct *mdata = *matstruct; 3632afb2bd1cSJunchao Zhang if (mdata->matDescr) {stat = cusparseDestroySpMat(mdata->matDescr);CHKERRCUSPARSE(stat);} 3633afb2bd1cSJunchao Zhang for (int i=0; i<3; i++) { 3634afb2bd1cSJunchao Zhang if (mdata->cuSpMV[i].initialized) { 3635afb2bd1cSJunchao Zhang err = cudaFree(mdata->cuSpMV[i].spmvBuffer);CHKERRCUDA(err); 3636afb2bd1cSJunchao Zhang stat = cusparseDestroyDnVec(mdata->cuSpMV[i].vecXDescr);CHKERRCUSPARSE(stat); 3637afb2bd1cSJunchao Zhang stat = cusparseDestroyDnVec(mdata->cuSpMV[i].vecYDescr);CHKERRCUSPARSE(stat); 3638afb2bd1cSJunchao Zhang } 3639afb2bd1cSJunchao Zhang } 3640afb2bd1cSJunchao Zhang #endif 36417f756511SDominic Meiser delete *matstruct; 36427e8381f9SStefano Zampini *matstruct = NULL; 36437f756511SDominic Meiser } 36447f756511SDominic Meiser PetscFunctionReturn(0); 36457f756511SDominic Meiser } 36467f756511SDominic Meiser 3647e8d2b73aSMark Adams PetscErrorCode MatSeqAIJCUSPARSETriFactors_Reset(Mat_SeqAIJCUSPARSETriFactors_p* trifactors) 36487f756511SDominic Meiser { 3649e6e9a74fSStefano Zampini PetscErrorCode ierr; 3650e6e9a74fSStefano Zampini 36517f756511SDominic Meiser PetscFunctionBegin; 36527f756511SDominic Meiser if (*trifactors) { 3653e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->loTriFactorPtr);CHKERRQ(ierr); 3654e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->upTriFactorPtr);CHKERRQ(ierr); 3655e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->loTriFactorPtrTranspose);CHKERRQ(ierr); 3656e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->upTriFactorPtrTranspose);CHKERRQ(ierr); 36577f756511SDominic Meiser delete (*trifactors)->rpermIndices; 36587f756511SDominic Meiser delete (*trifactors)->cpermIndices; 36597f756511SDominic Meiser delete (*trifactors)->workVector; 36607e8381f9SStefano Zampini (*trifactors)->rpermIndices = NULL; 36617e8381f9SStefano Zampini (*trifactors)->cpermIndices = NULL; 36627e8381f9SStefano Zampini (*trifactors)->workVector = NULL; 3663bddcd29dSMark Adams if ((*trifactors)->a_band_d) {cudaError_t cerr = cudaFree((*trifactors)->a_band_d);CHKERRCUDA(cerr);} 3664bddcd29dSMark Adams if ((*trifactors)->i_band_d) {cudaError_t cerr = cudaFree((*trifactors)->i_band_d);CHKERRCUDA(cerr);} 3665e8d2b73aSMark Adams (*trifactors)->init_dev_prop = PETSC_FALSE; 3666ccdfe979SStefano Zampini } 3667ccdfe979SStefano Zampini PetscFunctionReturn(0); 3668ccdfe979SStefano Zampini } 3669ccdfe979SStefano Zampini 3670ccdfe979SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSETriFactors_Destroy(Mat_SeqAIJCUSPARSETriFactors** trifactors) 3671ccdfe979SStefano Zampini { 3672e6e9a74fSStefano Zampini PetscErrorCode ierr; 3673ccdfe979SStefano Zampini cusparseHandle_t handle; 3674ccdfe979SStefano Zampini cusparseStatus_t stat; 3675ccdfe979SStefano Zampini 3676ccdfe979SStefano Zampini PetscFunctionBegin; 3677ccdfe979SStefano Zampini if (*trifactors) { 3678e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(trifactors);CHKERRQ(ierr); 36797f756511SDominic Meiser if (handle = (*trifactors)->handle) { 368057d48284SJunchao Zhang stat = cusparseDestroy(handle);CHKERRCUSPARSE(stat); 36817f756511SDominic Meiser } 3682e6e9a74fSStefano Zampini ierr = PetscFree(*trifactors);CHKERRQ(ierr); 36837f756511SDominic Meiser } 36847f756511SDominic Meiser PetscFunctionReturn(0); 36857f756511SDominic Meiser } 36867e8381f9SStefano Zampini 36877e8381f9SStefano Zampini struct IJCompare 36887e8381f9SStefano Zampini { 36897e8381f9SStefano Zampini __host__ __device__ 36907e8381f9SStefano Zampini inline bool operator() (const thrust::tuple<PetscInt, PetscInt> &t1, const thrust::tuple<PetscInt, PetscInt> &t2) 36917e8381f9SStefano Zampini { 36927e8381f9SStefano Zampini if (t1.get<0>() < t2.get<0>()) return true; 36937e8381f9SStefano Zampini if (t1.get<0>() == t2.get<0>()) return t1.get<1>() < t2.get<1>(); 36947e8381f9SStefano Zampini return false; 36957e8381f9SStefano Zampini } 36967e8381f9SStefano Zampini }; 36977e8381f9SStefano Zampini 36987e8381f9SStefano Zampini struct IJEqual 36997e8381f9SStefano Zampini { 37007e8381f9SStefano Zampini __host__ __device__ 37017e8381f9SStefano Zampini inline bool operator() (const thrust::tuple<PetscInt, PetscInt> &t1, const thrust::tuple<PetscInt, PetscInt> &t2) 37027e8381f9SStefano Zampini { 37037e8381f9SStefano Zampini if (t1.get<0>() != t2.get<0>() || t1.get<1>() != t2.get<1>()) return false; 37047e8381f9SStefano Zampini return true; 37057e8381f9SStefano Zampini } 37067e8381f9SStefano Zampini }; 37077e8381f9SStefano Zampini 37087e8381f9SStefano Zampini struct IJDiff 37097e8381f9SStefano Zampini { 37107e8381f9SStefano Zampini __host__ __device__ 37117e8381f9SStefano Zampini inline PetscInt operator() (const PetscInt &t1, const PetscInt &t2) 37127e8381f9SStefano Zampini { 37137e8381f9SStefano Zampini return t1 == t2 ? 0 : 1; 37147e8381f9SStefano Zampini } 37157e8381f9SStefano Zampini }; 37167e8381f9SStefano Zampini 37177e8381f9SStefano Zampini struct IJSum 37187e8381f9SStefano Zampini { 37197e8381f9SStefano Zampini __host__ __device__ 37207e8381f9SStefano Zampini inline PetscInt operator() (const PetscInt &t1, const PetscInt &t2) 37217e8381f9SStefano Zampini { 37227e8381f9SStefano Zampini return t1||t2; 37237e8381f9SStefano Zampini } 37247e8381f9SStefano Zampini }; 37257e8381f9SStefano Zampini 37267e8381f9SStefano Zampini #include <thrust/iterator/discard_iterator.h> 3727e61fc153SStefano Zampini PetscErrorCode MatSetValuesCOO_SeqAIJCUSPARSE(Mat A, const PetscScalar v[], InsertMode imode) 37287e8381f9SStefano Zampini { 37297e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3730fcdce8c4SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 3731bfcc3627SStefano Zampini THRUSTARRAY *cooPerm_v = NULL; 373208391a17SStefano Zampini thrust::device_ptr<const PetscScalar> d_v; 37337e8381f9SStefano Zampini CsrMatrix *matrix; 37347e8381f9SStefano Zampini PetscErrorCode ierr; 37357e8381f9SStefano Zampini PetscInt n; 37367e8381f9SStefano Zampini 37377e8381f9SStefano Zampini PetscFunctionBegin; 37387e8381f9SStefano Zampini if (!cusp) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUSPARSE struct"); 37397e8381f9SStefano Zampini if (!cusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUSPARSE CsrMatrix"); 37407e8381f9SStefano Zampini if (!cusp->cooPerm) { 37417e8381f9SStefano Zampini ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 37427e8381f9SStefano Zampini ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 37437e8381f9SStefano Zampini PetscFunctionReturn(0); 37447e8381f9SStefano Zampini } 37457e8381f9SStefano Zampini matrix = (CsrMatrix*)cusp->mat->mat; 37467e8381f9SStefano Zampini if (!matrix->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 3747e61fc153SStefano Zampini if (!v) { 3748e61fc153SStefano Zampini if (imode == INSERT_VALUES) thrust::fill(thrust::device,matrix->values->begin(),matrix->values->end(),0.); 3749e61fc153SStefano Zampini goto finalize; 37507e8381f9SStefano Zampini } 3751e61fc153SStefano Zampini n = cusp->cooPerm->size(); 375208391a17SStefano Zampini if (isCudaMem(v)) { 375308391a17SStefano Zampini d_v = thrust::device_pointer_cast(v); 375408391a17SStefano Zampini } else { 3755e61fc153SStefano Zampini cooPerm_v = new THRUSTARRAY(n); 3756e61fc153SStefano Zampini cooPerm_v->assign(v,v+n); 375708391a17SStefano Zampini d_v = cooPerm_v->data(); 3758e61fc153SStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscScalar));CHKERRQ(ierr); 375908391a17SStefano Zampini } 3760bfcc3627SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3761e61fc153SStefano Zampini if (imode == ADD_VALUES) { /* ADD VALUES means add to existing ones */ 3762ddea5d60SJunchao Zhang if (cusp->cooPerm_a) { /* there are repeated entries in d_v[], and we need to add these them */ 3763bfcc3627SStefano Zampini THRUSTARRAY *cooPerm_w = new THRUSTARRAY(matrix->values->size()); 376408391a17SStefano Zampini auto vbit = thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()); 3765ddea5d60SJunchao Zhang /* thrust::reduce_by_key(keys_first,keys_last,values_first,keys_output,values_output) 3766ddea5d60SJunchao Zhang cooPerm_a = [0,0,1,2,3,4]. The length is n, number of nonozeros in d_v[]. 3767ddea5d60SJunchao Zhang cooPerm_a is ordered. d_v[i] is the cooPerm_a[i]-th unique nonzero. 3768ddea5d60SJunchao Zhang */ 3769e61fc153SStefano Zampini thrust::reduce_by_key(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),vbit,thrust::make_discard_iterator(),cooPerm_w->begin(),thrust::equal_to<PetscInt>(),thrust::plus<PetscScalar>()); 3770e61fc153SStefano Zampini thrust::transform(cooPerm_w->begin(),cooPerm_w->end(),matrix->values->begin(),matrix->values->begin(),thrust::plus<PetscScalar>()); 3771e61fc153SStefano Zampini delete cooPerm_w; 37727e8381f9SStefano Zampini } else { 3773ddea5d60SJunchao Zhang /* all nonzeros in d_v[] are unique entries */ 377408391a17SStefano Zampini auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()), 37757e8381f9SStefano Zampini matrix->values->begin())); 377608391a17SStefano Zampini auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->end()), 37777e8381f9SStefano Zampini matrix->values->end())); 3778ddea5d60SJunchao Zhang thrust::for_each(zibit,zieit,VecCUDAPlusEquals()); /* values[i] += d_v[cooPerm[i]] */ 37797e8381f9SStefano Zampini } 37807e8381f9SStefano Zampini } else { 3781e61fc153SStefano Zampini if (cusp->cooPerm_a) { /* repeated entries in COO, with INSERT_VALUES -> reduce */ 378208391a17SStefano Zampini auto vbit = thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()); 3783e61fc153SStefano Zampini thrust::reduce_by_key(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),vbit,thrust::make_discard_iterator(),matrix->values->begin(),thrust::equal_to<PetscInt>(),thrust::plus<PetscScalar>()); 37847e8381f9SStefano Zampini } else { 378508391a17SStefano Zampini auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()), 37867e8381f9SStefano Zampini matrix->values->begin())); 378708391a17SStefano Zampini auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->end()), 37887e8381f9SStefano Zampini matrix->values->end())); 37897e8381f9SStefano Zampini thrust::for_each(zibit,zieit,VecCUDAEquals()); 37907e8381f9SStefano Zampini } 37917e8381f9SStefano Zampini } 3792bfcc3627SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3793e61fc153SStefano Zampini finalize: 3794e61fc153SStefano Zampini delete cooPerm_v; 37957e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 3796e61fc153SStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr); 3797fcdce8c4SStefano Zampini /* shorter version of MatAssemblyEnd_SeqAIJ */ 3798fcdce8c4SStefano Zampini ierr = PetscInfo3(A,"Matrix size: %D X %D; storage space: 0 unneeded,%D used\n",A->rmap->n,A->cmap->n,a->nz);CHKERRQ(ierr); 3799fcdce8c4SStefano Zampini ierr = PetscInfo(A,"Number of mallocs during MatSetValues() is 0\n");CHKERRQ(ierr); 3800fcdce8c4SStefano Zampini ierr = PetscInfo1(A,"Maximum nonzeros in any row is %D\n",a->rmax);CHKERRQ(ierr); 3801fcdce8c4SStefano Zampini a->reallocs = 0; 3802fcdce8c4SStefano Zampini A->info.mallocs += 0; 3803fcdce8c4SStefano Zampini A->info.nz_unneeded = 0; 3804fcdce8c4SStefano Zampini A->assembled = A->was_assembled = PETSC_TRUE; 3805fcdce8c4SStefano Zampini A->num_ass++; 38067e8381f9SStefano Zampini PetscFunctionReturn(0); 38077e8381f9SStefano Zampini } 38087e8381f9SStefano Zampini 3809a49f1ed0SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEInvalidateTranspose(Mat A, PetscBool destroy) 3810a49f1ed0SStefano Zampini { 3811a49f1ed0SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3812a49f1ed0SStefano Zampini PetscErrorCode ierr; 3813a49f1ed0SStefano Zampini 3814a49f1ed0SStefano Zampini PetscFunctionBegin; 3815a49f1ed0SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3816a49f1ed0SStefano Zampini if (!cusp) PetscFunctionReturn(0); 3817a49f1ed0SStefano Zampini if (destroy) { 3818a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&cusp->matTranspose,cusp->format);CHKERRQ(ierr); 3819a49f1ed0SStefano Zampini delete cusp->csr2csc_i; 3820a49f1ed0SStefano Zampini cusp->csr2csc_i = NULL; 3821a49f1ed0SStefano Zampini } 38221a2c6b5cSJunchao Zhang A->transupdated = PETSC_FALSE; 3823a49f1ed0SStefano Zampini PetscFunctionReturn(0); 3824a49f1ed0SStefano Zampini } 3825a49f1ed0SStefano Zampini 38267e8381f9SStefano Zampini #include <thrust/binary_search.h> 3827e61fc153SStefano Zampini PetscErrorCode MatSetPreallocationCOO_SeqAIJCUSPARSE(Mat A, PetscInt n, const PetscInt coo_i[], const PetscInt coo_j[]) 38287e8381f9SStefano Zampini { 38297e8381f9SStefano Zampini PetscErrorCode ierr; 38307e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 38317e8381f9SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 38327e8381f9SStefano Zampini PetscInt cooPerm_n, nzr = 0; 38337e8381f9SStefano Zampini cudaError_t cerr; 38347e8381f9SStefano Zampini 38357e8381f9SStefano Zampini PetscFunctionBegin; 38367e8381f9SStefano Zampini ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr); 38377e8381f9SStefano Zampini ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr); 38387e8381f9SStefano Zampini cooPerm_n = cusp->cooPerm ? cusp->cooPerm->size() : 0; 38397e8381f9SStefano Zampini if (n != cooPerm_n) { 38407e8381f9SStefano Zampini delete cusp->cooPerm; 38417e8381f9SStefano Zampini delete cusp->cooPerm_a; 38427e8381f9SStefano Zampini cusp->cooPerm = NULL; 38437e8381f9SStefano Zampini cusp->cooPerm_a = NULL; 38447e8381f9SStefano Zampini } 38457e8381f9SStefano Zampini if (n) { 38467e8381f9SStefano Zampini THRUSTINTARRAY d_i(n); 38477e8381f9SStefano Zampini THRUSTINTARRAY d_j(n); 38487e8381f9SStefano Zampini THRUSTINTARRAY ii(A->rmap->n); 38497e8381f9SStefano Zampini 38507e8381f9SStefano Zampini if (!cusp->cooPerm) { cusp->cooPerm = new THRUSTINTARRAY(n); } 38517e8381f9SStefano Zampini if (!cusp->cooPerm_a) { cusp->cooPerm_a = new THRUSTINTARRAY(n); } 38527e8381f9SStefano Zampini 38537e8381f9SStefano Zampini ierr = PetscLogCpuToGpu(2.*n*sizeof(PetscInt));CHKERRQ(ierr); 38547e8381f9SStefano Zampini d_i.assign(coo_i,coo_i+n); 38557e8381f9SStefano Zampini d_j.assign(coo_j,coo_j+n); 3856ddea5d60SJunchao Zhang 3857ddea5d60SJunchao Zhang /* Ex. 3858ddea5d60SJunchao Zhang n = 6 3859ddea5d60SJunchao Zhang coo_i = [3,3,1,4,1,4] 3860ddea5d60SJunchao Zhang coo_j = [3,2,2,5,2,6] 3861ddea5d60SJunchao Zhang */ 38627e8381f9SStefano Zampini auto fkey = thrust::make_zip_iterator(thrust::make_tuple(d_i.begin(),d_j.begin())); 38637e8381f9SStefano Zampini auto ekey = thrust::make_zip_iterator(thrust::make_tuple(d_i.end(),d_j.end())); 38647e8381f9SStefano Zampini 386508391a17SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 38667e8381f9SStefano Zampini thrust::sequence(thrust::device, cusp->cooPerm->begin(), cusp->cooPerm->end(), 0); 3867ddea5d60SJunchao Zhang thrust::sort_by_key(fkey, ekey, cusp->cooPerm->begin(), IJCompare()); /* sort by row, then by col */ 3868ddea5d60SJunchao Zhang *cusp->cooPerm_a = d_i; /* copy the sorted array */ 38697e8381f9SStefano Zampini THRUSTINTARRAY w = d_j; 38707e8381f9SStefano Zampini 3871ddea5d60SJunchao Zhang /* 3872ddea5d60SJunchao Zhang d_i = [1,1,3,3,4,4] 3873ddea5d60SJunchao Zhang d_j = [2,2,2,3,5,6] 3874ddea5d60SJunchao Zhang cooPerm = [2,4,1,0,3,5] 3875ddea5d60SJunchao Zhang */ 3876ddea5d60SJunchao Zhang auto nekey = thrust::unique(fkey, ekey, IJEqual()); /* unique (d_i, d_j) */ 3877ddea5d60SJunchao Zhang 3878ddea5d60SJunchao Zhang /* 3879ddea5d60SJunchao Zhang d_i = [1,3,3,4,4,x] 3880ddea5d60SJunchao Zhang ^ekey 3881ddea5d60SJunchao Zhang d_j = [2,2,3,5,6,x] 3882ddea5d60SJunchao Zhang ^nekye 3883ddea5d60SJunchao Zhang */ 38847e8381f9SStefano Zampini if (nekey == ekey) { /* all entries are unique */ 38857e8381f9SStefano Zampini delete cusp->cooPerm_a; 38867e8381f9SStefano Zampini cusp->cooPerm_a = NULL; 3887ddea5d60SJunchao Zhang } else { /* Stefano: I couldn't come up with a more elegant algorithm */ 3888ddea5d60SJunchao Zhang /* idea: any change in i or j in the (i,j) sequence implies a new nonzero */ 3889ddea5d60SJunchao Zhang adjacent_difference(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),cusp->cooPerm_a->begin(),IJDiff()); /* cooPerm_a: [1,1,3,3,4,4] => [1,0,1,0,1,0]*/ 3890ddea5d60SJunchao Zhang adjacent_difference(w.begin(),w.end(),w.begin(),IJDiff()); /* w: [2,2,2,3,5,6] => [2,0,0,1,1,1]*/ 3891ddea5d60SJunchao Zhang (*cusp->cooPerm_a)[0] = 0; /* clear the first entry, though accessing an entry on device implies a cudaMemcpy */ 38927e8381f9SStefano Zampini w[0] = 0; 3893ddea5d60SJunchao Zhang thrust::transform(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),w.begin(),cusp->cooPerm_a->begin(),IJSum()); /* cooPerm_a = [0,0,1,1,1,1]*/ 3894ddea5d60SJunchao Zhang thrust::inclusive_scan(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),cusp->cooPerm_a->begin(),thrust::plus<PetscInt>()); /*cooPerm_a=[0,0,1,2,3,4]*/ 38957e8381f9SStefano Zampini } 38967e8381f9SStefano Zampini thrust::counting_iterator<PetscInt> search_begin(0); 3897ddea5d60SJunchao Zhang thrust::upper_bound(d_i.begin(), nekey.get_iterator_tuple().get<0>(), /* binary search entries of [0,1,2,3,4,5,6) in ordered array d_i = [1,3,3,4,4], supposing A->rmap->n = 6. */ 3898ddea5d60SJunchao Zhang search_begin, search_begin + A->rmap->n, /* return in ii[] the index of last position in d_i[] where value could be inserted without violating the ordering */ 3899ddea5d60SJunchao Zhang ii.begin()); /* ii = [0,1,1,3,5,5]. A leading 0 will be added later */ 390008391a17SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 39017e8381f9SStefano Zampini 39027e8381f9SStefano Zampini ierr = MatSeqXAIJFreeAIJ(A,&a->a,&a->j,&a->i);CHKERRQ(ierr); 39037e8381f9SStefano Zampini a->singlemalloc = PETSC_FALSE; 39047e8381f9SStefano Zampini a->free_a = PETSC_TRUE; 39057e8381f9SStefano Zampini a->free_ij = PETSC_TRUE; 39067e8381f9SStefano Zampini ierr = PetscMalloc1(A->rmap->n+1,&a->i);CHKERRQ(ierr); 3907ddea5d60SJunchao Zhang a->i[0] = 0; /* a->i = [0,0,1,1,3,5,5] */ 39087e8381f9SStefano Zampini cerr = cudaMemcpy(a->i+1,ii.data().get(),A->rmap->n*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 39097e8381f9SStefano Zampini a->nz = a->maxnz = a->i[A->rmap->n]; 3910fcdce8c4SStefano Zampini a->rmax = 0; 39117e8381f9SStefano Zampini ierr = PetscMalloc1(a->nz,&a->a);CHKERRQ(ierr); 39127e8381f9SStefano Zampini ierr = PetscMalloc1(a->nz,&a->j);CHKERRQ(ierr); 39137e8381f9SStefano Zampini cerr = cudaMemcpy(a->j,d_j.data().get(),a->nz*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 39147e8381f9SStefano Zampini if (!a->ilen) { ierr = PetscMalloc1(A->rmap->n,&a->ilen);CHKERRQ(ierr); } 39157e8381f9SStefano Zampini if (!a->imax) { ierr = PetscMalloc1(A->rmap->n,&a->imax);CHKERRQ(ierr); } 39167e8381f9SStefano Zampini for (PetscInt i = 0; i < A->rmap->n; i++) { 39177e8381f9SStefano Zampini const PetscInt nnzr = a->i[i+1] - a->i[i]; 39187e8381f9SStefano Zampini nzr += (PetscInt)!!(nnzr); 39197e8381f9SStefano Zampini a->ilen[i] = a->imax[i] = nnzr; 3920fcdce8c4SStefano Zampini a->rmax = PetscMax(a->rmax,nnzr); 39217e8381f9SStefano Zampini } 3922fcdce8c4SStefano Zampini a->nonzerorowcnt = nzr; 39237e8381f9SStefano Zampini A->preallocated = PETSC_TRUE; 39247e8381f9SStefano Zampini ierr = PetscLogGpuToCpu((A->rmap->n+a->nz)*sizeof(PetscInt));CHKERRQ(ierr); 3925fcdce8c4SStefano Zampini ierr = MatMarkDiagonal_SeqAIJ(A);CHKERRQ(ierr); 39267e8381f9SStefano Zampini } else { 39277e8381f9SStefano Zampini ierr = MatSeqAIJSetPreallocation(A,0,NULL);CHKERRQ(ierr); 39287e8381f9SStefano Zampini } 3929e61fc153SStefano Zampini ierr = MatSetOption(A,MAT_NEW_NONZERO_ALLOCATION_ERR,PETSC_TRUE);CHKERRQ(ierr); 39307e8381f9SStefano Zampini 39317e8381f9SStefano Zampini /* We want to allocate the CUSPARSE struct for matvec now. 3932e61fc153SStefano Zampini The code is so convoluted now that I prefer to copy zeros */ 3933e61fc153SStefano Zampini ierr = PetscArrayzero(a->a,a->nz);CHKERRQ(ierr); 39347e8381f9SStefano Zampini ierr = MatCheckCompressedRow(A,nzr,&a->compressedrow,a->i,A->rmap->n,0.6);CHKERRQ(ierr); 39357e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_CPU; 39367e8381f9SStefano Zampini A->nonzerostate++; 39377e8381f9SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 3938a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr); 39397e8381f9SStefano Zampini 39407e8381f9SStefano Zampini A->assembled = PETSC_FALSE; 39417e8381f9SStefano Zampini A->was_assembled = PETSC_FALSE; 39427e8381f9SStefano Zampini PetscFunctionReturn(0); 39437e8381f9SStefano Zampini } 3944ed502f03SStefano Zampini 39455b7e41feSStefano Zampini /*@C 39465b7e41feSStefano Zampini MatSeqAIJCUSPARSEGetIJ - returns the device row storage i and j indices for MATSEQAIJCUSPARSE matrices. 39475b7e41feSStefano Zampini 39485b7e41feSStefano Zampini Not collective 39495b7e41feSStefano Zampini 39505b7e41feSStefano Zampini Input Parameters: 39515b7e41feSStefano Zampini + A - the matrix 39525b7e41feSStefano Zampini - compressed - PETSC_TRUE or PETSC_FALSE indicating the matrix data structure should be always returned in compressed form 39535b7e41feSStefano Zampini 39545b7e41feSStefano Zampini Output Parameters: 39555b7e41feSStefano Zampini + ia - the CSR row pointers 39565b7e41feSStefano Zampini - ja - the CSR column indices 39575b7e41feSStefano Zampini 39585b7e41feSStefano Zampini Level: developer 39595b7e41feSStefano Zampini 39605b7e41feSStefano Zampini Notes: 39615b7e41feSStefano Zampini When compressed is true, the CSR structure does not contain empty rows 39625b7e41feSStefano Zampini 39635b7e41feSStefano Zampini .seealso: MatSeqAIJCUSPARSERestoreIJ(), MatSeqAIJCUSPARSEGetArrayRead() 39645b7e41feSStefano Zampini @*/ 39655f101d05SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetIJ(Mat A, PetscBool compressed, const int** i, const int **j) 39665f101d05SStefano Zampini { 39675f101d05SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 39685f101d05SStefano Zampini CsrMatrix *csr; 39695f101d05SStefano Zampini PetscErrorCode ierr; 39705f101d05SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 39715f101d05SStefano Zampini 39725f101d05SStefano Zampini PetscFunctionBegin; 39735f101d05SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 39745f101d05SStefano Zampini if (!i || !j) PetscFunctionReturn(0); 39755f101d05SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 39765f101d05SStefano Zampini if (cusp->format == MAT_CUSPARSE_ELL || cusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 39775f101d05SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 39785f101d05SStefano Zampini if (!cusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 39795f101d05SStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 39805f101d05SStefano Zampini if (i) { 39815f101d05SStefano Zampini if (!compressed && a->compressedrow.use) { /* need full row offset */ 39825f101d05SStefano Zampini if (!cusp->rowoffsets_gpu) { 39835f101d05SStefano Zampini cusp->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n + 1); 39845f101d05SStefano Zampini cusp->rowoffsets_gpu->assign(a->i,a->i + A->rmap->n + 1); 39855f101d05SStefano Zampini ierr = PetscLogCpuToGpu((A->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 39865f101d05SStefano Zampini } 39875f101d05SStefano Zampini *i = cusp->rowoffsets_gpu->data().get(); 39885f101d05SStefano Zampini } else *i = csr->row_offsets->data().get(); 39895f101d05SStefano Zampini } 39905f101d05SStefano Zampini if (j) *j = csr->column_indices->data().get(); 39915f101d05SStefano Zampini PetscFunctionReturn(0); 39925f101d05SStefano Zampini } 39935f101d05SStefano Zampini 39945b7e41feSStefano Zampini /*@C 39955b7e41feSStefano Zampini MatSeqAIJCUSPARSERestoreIJ - restore the device row storage i and j indices obtained with MatSeqAIJCUSPARSEGetIJ() 39965b7e41feSStefano Zampini 39975b7e41feSStefano Zampini Not collective 39985b7e41feSStefano Zampini 39995b7e41feSStefano Zampini Input Parameters: 40005b7e41feSStefano Zampini + A - the matrix 40015b7e41feSStefano Zampini - compressed - PETSC_TRUE or PETSC_FALSE indicating the matrix data structure should be always returned in compressed form 40025b7e41feSStefano Zampini 40035b7e41feSStefano Zampini Output Parameters: 40045b7e41feSStefano Zampini + ia - the CSR row pointers 40055b7e41feSStefano Zampini - ja - the CSR column indices 40065b7e41feSStefano Zampini 40075b7e41feSStefano Zampini Level: developer 40085b7e41feSStefano Zampini 40095b7e41feSStefano Zampini .seealso: MatSeqAIJCUSPARSEGetIJ() 40105b7e41feSStefano Zampini @*/ 40115f101d05SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreIJ(Mat A, PetscBool compressed, const int** i, const int **j) 40125f101d05SStefano Zampini { 40135f101d05SStefano Zampini PetscFunctionBegin; 40145f101d05SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 40155f101d05SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 40165f101d05SStefano Zampini if (i) *i = NULL; 40175f101d05SStefano Zampini if (j) *j = NULL; 40185f101d05SStefano Zampini PetscFunctionReturn(0); 40195f101d05SStefano Zampini } 40205f101d05SStefano Zampini 40215b7e41feSStefano Zampini /*@C 40225b7e41feSStefano Zampini MatSeqAIJCUSPARSEGetArrayRead - gives read-only access to the array where the device data for a MATSEQAIJCUSPARSE matrix is stored 40235b7e41feSStefano Zampini 40245b7e41feSStefano Zampini Not Collective 40255b7e41feSStefano Zampini 40265b7e41feSStefano Zampini Input Parameter: 40275b7e41feSStefano Zampini . A - a MATSEQAIJCUSPARSE matrix 40285b7e41feSStefano Zampini 40295b7e41feSStefano Zampini Output Parameter: 40305b7e41feSStefano Zampini . a - pointer to the device data 40315b7e41feSStefano Zampini 40325b7e41feSStefano Zampini Level: developer 40335b7e41feSStefano Zampini 40345b7e41feSStefano Zampini Notes: may trigger host-device copies if up-to-date matrix data is on host 40355b7e41feSStefano Zampini 40365b7e41feSStefano Zampini .seealso: MatSeqAIJCUSPARSEGetArray(), MatSeqAIJCUSPARSEGetArrayWrite(), MatSeqAIJCUSPARSERestoreArrayRead() 40375b7e41feSStefano Zampini @*/ 4038ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetArrayRead(Mat A, const PetscScalar** a) 4039ed502f03SStefano Zampini { 4040ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 4041ed502f03SStefano Zampini CsrMatrix *csr; 4042ed502f03SStefano Zampini PetscErrorCode ierr; 4043ed502f03SStefano Zampini 4044ed502f03SStefano Zampini PetscFunctionBegin; 4045ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 4046ed502f03SStefano Zampini PetscValidPointer(a,2); 4047ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 4048ed502f03SStefano Zampini if (cusp->format == MAT_CUSPARSE_ELL || cusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 4049ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 405033c9ba73SStefano Zampini if (!cusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 4051ed502f03SStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 4052ed502f03SStefano Zampini if (!csr->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 4053ed502f03SStefano Zampini *a = csr->values->data().get(); 4054ed502f03SStefano Zampini PetscFunctionReturn(0); 4055ed502f03SStefano Zampini } 4056ed502f03SStefano Zampini 40575b7e41feSStefano Zampini /*@C 40585b7e41feSStefano Zampini MatSeqAIJCUSPARSERestoreArrayRead - restore the read-only access array obtained from MatSeqAIJCUSPARSEGetArrayRead() 40595b7e41feSStefano Zampini 40605b7e41feSStefano Zampini Not Collective 40615b7e41feSStefano Zampini 40625b7e41feSStefano Zampini Input Parameter: 40635b7e41feSStefano Zampini . A - a MATSEQAIJCUSPARSE matrix 40645b7e41feSStefano Zampini 40655b7e41feSStefano Zampini Output Parameter: 40665b7e41feSStefano Zampini . a - pointer to the device data 40675b7e41feSStefano Zampini 40685b7e41feSStefano Zampini Level: developer 40695b7e41feSStefano Zampini 40705b7e41feSStefano Zampini .seealso: MatSeqAIJCUSPARSEGetArrayRead() 40715b7e41feSStefano Zampini @*/ 4072ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreArrayRead(Mat A, const PetscScalar** a) 4073ed502f03SStefano Zampini { 4074ed502f03SStefano Zampini PetscFunctionBegin; 4075ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 4076ed502f03SStefano Zampini PetscValidPointer(a,2); 4077ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 4078ed502f03SStefano Zampini *a = NULL; 4079ed502f03SStefano Zampini PetscFunctionReturn(0); 4080ed502f03SStefano Zampini } 4081ed502f03SStefano Zampini 40825b7e41feSStefano Zampini /*@C 40835b7e41feSStefano Zampini MatSeqAIJCUSPARSEGetArray - gives read-write access to the array where the device data for a MATSEQAIJCUSPARSE matrix is stored 40845b7e41feSStefano Zampini 40855b7e41feSStefano Zampini Not Collective 40865b7e41feSStefano Zampini 40875b7e41feSStefano Zampini Input Parameter: 40885b7e41feSStefano Zampini . A - a MATSEQAIJCUSPARSE matrix 40895b7e41feSStefano Zampini 40905b7e41feSStefano Zampini Output Parameter: 40915b7e41feSStefano Zampini . a - pointer to the device data 40925b7e41feSStefano Zampini 40935b7e41feSStefano Zampini Level: developer 40945b7e41feSStefano Zampini 40955b7e41feSStefano Zampini Notes: may trigger host-device copies if up-to-date matrix data is on host 40965b7e41feSStefano Zampini 40975b7e41feSStefano Zampini .seealso: MatSeqAIJCUSPARSEGetArrayRead(), MatSeqAIJCUSPARSEGetArrayWrite(), MatSeqAIJCUSPARSERestoreArray() 40985b7e41feSStefano Zampini @*/ 4099039c6fbaSStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetArray(Mat A, PetscScalar** a) 4100039c6fbaSStefano Zampini { 4101039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 4102039c6fbaSStefano Zampini CsrMatrix *csr; 4103039c6fbaSStefano Zampini PetscErrorCode ierr; 4104039c6fbaSStefano Zampini 4105039c6fbaSStefano Zampini PetscFunctionBegin; 4106039c6fbaSStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 4107039c6fbaSStefano Zampini PetscValidPointer(a,2); 4108039c6fbaSStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 4109039c6fbaSStefano Zampini if (cusp->format == MAT_CUSPARSE_ELL || cusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 4110039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 411133c9ba73SStefano Zampini if (!cusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 4112039c6fbaSStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 4113039c6fbaSStefano Zampini if (!csr->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 4114039c6fbaSStefano Zampini *a = csr->values->data().get(); 4115039c6fbaSStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 4116a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_FALSE);CHKERRQ(ierr); 4117039c6fbaSStefano Zampini PetscFunctionReturn(0); 4118039c6fbaSStefano Zampini } 41195b7e41feSStefano Zampini /*@C 41205b7e41feSStefano Zampini MatSeqAIJCUSPARSERestoreArray - restore the read-write access array obtained from MatSeqAIJCUSPARSEGetArray() 4121039c6fbaSStefano Zampini 41225b7e41feSStefano Zampini Not Collective 41235b7e41feSStefano Zampini 41245b7e41feSStefano Zampini Input Parameter: 41255b7e41feSStefano Zampini . A - a MATSEQAIJCUSPARSE matrix 41265b7e41feSStefano Zampini 41275b7e41feSStefano Zampini Output Parameter: 41285b7e41feSStefano Zampini . a - pointer to the device data 41295b7e41feSStefano Zampini 41305b7e41feSStefano Zampini Level: developer 41315b7e41feSStefano Zampini 41325b7e41feSStefano Zampini .seealso: MatSeqAIJCUSPARSEGetArray() 41335b7e41feSStefano Zampini @*/ 4134039c6fbaSStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreArray(Mat A, PetscScalar** a) 4135039c6fbaSStefano Zampini { 4136039c6fbaSStefano Zampini PetscErrorCode ierr; 4137039c6fbaSStefano Zampini 4138039c6fbaSStefano Zampini PetscFunctionBegin; 4139039c6fbaSStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 4140039c6fbaSStefano Zampini PetscValidPointer(a,2); 4141039c6fbaSStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 4142039c6fbaSStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr); 4143039c6fbaSStefano Zampini *a = NULL; 4144039c6fbaSStefano Zampini PetscFunctionReturn(0); 4145039c6fbaSStefano Zampini } 4146039c6fbaSStefano Zampini 41475b7e41feSStefano Zampini /*@C 41485b7e41feSStefano Zampini MatSeqAIJCUSPARSEGetArrayWrite - gives write access to the array where the device data for a MATSEQAIJCUSPARSE matrix is stored 41495b7e41feSStefano Zampini 41505b7e41feSStefano Zampini Not Collective 41515b7e41feSStefano Zampini 41525b7e41feSStefano Zampini Input Parameter: 41535b7e41feSStefano Zampini . A - a MATSEQAIJCUSPARSE matrix 41545b7e41feSStefano Zampini 41555b7e41feSStefano Zampini Output Parameter: 41565b7e41feSStefano Zampini . a - pointer to the device data 41575b7e41feSStefano Zampini 41585b7e41feSStefano Zampini Level: developer 41595b7e41feSStefano Zampini 41605b7e41feSStefano Zampini Notes: does not trigger host-device copies and flags data validity on the GPU 41615b7e41feSStefano Zampini 41625b7e41feSStefano Zampini .seealso: MatSeqAIJCUSPARSEGetArray(), MatSeqAIJCUSPARSEGetArrayRead(), MatSeqAIJCUSPARSERestoreArrayWrite() 41635b7e41feSStefano Zampini @*/ 4164ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetArrayWrite(Mat A, PetscScalar** a) 4165ed502f03SStefano Zampini { 4166ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 4167ed502f03SStefano Zampini CsrMatrix *csr; 4168a49f1ed0SStefano Zampini PetscErrorCode ierr; 4169ed502f03SStefano Zampini 4170ed502f03SStefano Zampini PetscFunctionBegin; 4171ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 4172ed502f03SStefano Zampini PetscValidPointer(a,2); 4173ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 4174ed502f03SStefano Zampini if (cusp->format == MAT_CUSPARSE_ELL || cusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 417533c9ba73SStefano Zampini if (!cusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 4176ed502f03SStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 4177ed502f03SStefano Zampini if (!csr->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 4178ed502f03SStefano Zampini *a = csr->values->data().get(); 4179039c6fbaSStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 4180a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_FALSE);CHKERRQ(ierr); 4181ed502f03SStefano Zampini PetscFunctionReturn(0); 4182ed502f03SStefano Zampini } 4183ed502f03SStefano Zampini 41845b7e41feSStefano Zampini /*@C 41855b7e41feSStefano Zampini MatSeqAIJCUSPARSERestoreArrayWrite - restore the write-only access array obtained from MatSeqAIJCUSPARSEGetArrayWrite() 41865b7e41feSStefano Zampini 41875b7e41feSStefano Zampini Not Collective 41885b7e41feSStefano Zampini 41895b7e41feSStefano Zampini Input Parameter: 41905b7e41feSStefano Zampini . A - a MATSEQAIJCUSPARSE matrix 41915b7e41feSStefano Zampini 41925b7e41feSStefano Zampini Output Parameter: 41935b7e41feSStefano Zampini . a - pointer to the device data 41945b7e41feSStefano Zampini 41955b7e41feSStefano Zampini Level: developer 41965b7e41feSStefano Zampini 41975b7e41feSStefano Zampini .seealso: MatSeqAIJCUSPARSEGetArrayWrite() 41985b7e41feSStefano Zampini @*/ 4199ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreArrayWrite(Mat A, PetscScalar** a) 4200ed502f03SStefano Zampini { 4201ed502f03SStefano Zampini PetscErrorCode ierr; 4202ed502f03SStefano Zampini 4203ed502f03SStefano Zampini PetscFunctionBegin; 4204ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 4205ed502f03SStefano Zampini PetscValidPointer(a,2); 4206ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 4207ed502f03SStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr); 4208ed502f03SStefano Zampini *a = NULL; 4209ed502f03SStefano Zampini PetscFunctionReturn(0); 4210ed502f03SStefano Zampini } 4211ed502f03SStefano Zampini 4212ed502f03SStefano Zampini struct IJCompare4 4213ed502f03SStefano Zampini { 4214ed502f03SStefano Zampini __host__ __device__ 42152ed87e7eSStefano Zampini inline bool operator() (const thrust::tuple<int, int, PetscScalar, int> &t1, const thrust::tuple<int, int, PetscScalar, int> &t2) 4216ed502f03SStefano Zampini { 4217ed502f03SStefano Zampini if (t1.get<0>() < t2.get<0>()) return true; 4218ed502f03SStefano Zampini if (t1.get<0>() == t2.get<0>()) return t1.get<1>() < t2.get<1>(); 4219ed502f03SStefano Zampini return false; 4220ed502f03SStefano Zampini } 4221ed502f03SStefano Zampini }; 4222ed502f03SStefano Zampini 42238909a122SStefano Zampini struct Shift 42248909a122SStefano Zampini { 4225ed502f03SStefano Zampini int _shift; 4226ed502f03SStefano Zampini 4227ed502f03SStefano Zampini Shift(int shift) : _shift(shift) {} 4228ed502f03SStefano Zampini __host__ __device__ 4229ed502f03SStefano Zampini inline int operator() (const int &c) 4230ed502f03SStefano Zampini { 4231ed502f03SStefano Zampini return c + _shift; 4232ed502f03SStefano Zampini } 4233ed502f03SStefano Zampini }; 4234ed502f03SStefano Zampini 4235ddea5d60SJunchao Zhang /* merges two SeqAIJCUSPARSE matrices A, B by concatenating their rows. [A';B']' operation in matlab notation */ 4236ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEMergeMats(Mat A,Mat B,MatReuse reuse,Mat* C) 4237ed502f03SStefano Zampini { 4238ed502f03SStefano Zampini PetscErrorCode ierr; 4239ed502f03SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data, *b = (Mat_SeqAIJ*)B->data, *c; 4240ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr, *Bcusp = (Mat_SeqAIJCUSPARSE*)B->spptr, *Ccusp; 4241ed502f03SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Cmat; 4242ed502f03SStefano Zampini CsrMatrix *Acsr,*Bcsr,*Ccsr; 4243ed502f03SStefano Zampini PetscInt Annz,Bnnz; 4244ed502f03SStefano Zampini cusparseStatus_t stat; 4245ed502f03SStefano Zampini PetscInt i,m,n,zero = 0; 4246ed502f03SStefano Zampini cudaError_t cerr; 4247ed502f03SStefano Zampini 4248ed502f03SStefano Zampini PetscFunctionBegin; 4249ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 4250ed502f03SStefano Zampini PetscValidHeaderSpecific(B,MAT_CLASSID,2); 4251ed502f03SStefano Zampini PetscValidPointer(C,4); 4252ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 4253ed502f03SStefano Zampini PetscCheckTypeName(B,MATSEQAIJCUSPARSE); 4254ed502f03SStefano Zampini if (A->rmap->n != B->rmap->n) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Invalid number or rows %D != %D",A->rmap->n,B->rmap->n); 4255ed502f03SStefano Zampini if (reuse == MAT_INPLACE_MATRIX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_INPLACE_MATRIX not supported"); 4256ed502f03SStefano Zampini if (Acusp->format == MAT_CUSPARSE_ELL || Acusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 4257ed502f03SStefano Zampini if (Bcusp->format == MAT_CUSPARSE_ELL || Bcusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 4258ed502f03SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 4259ed502f03SStefano Zampini m = A->rmap->n; 4260ed502f03SStefano Zampini n = A->cmap->n + B->cmap->n; 4261ed502f03SStefano Zampini ierr = MatCreate(PETSC_COMM_SELF,C);CHKERRQ(ierr); 4262ed502f03SStefano Zampini ierr = MatSetSizes(*C,m,n,m,n);CHKERRQ(ierr); 4263ed502f03SStefano Zampini ierr = MatSetType(*C,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 4264ed502f03SStefano Zampini c = (Mat_SeqAIJ*)(*C)->data; 4265ed502f03SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)(*C)->spptr; 4266ed502f03SStefano Zampini Cmat = new Mat_SeqAIJCUSPARSEMultStruct; 4267ed502f03SStefano Zampini Ccsr = new CsrMatrix; 4268ed502f03SStefano Zampini Cmat->cprowIndices = NULL; 4269ed502f03SStefano Zampini c->compressedrow.use = PETSC_FALSE; 4270ed502f03SStefano Zampini c->compressedrow.nrows = 0; 4271ed502f03SStefano Zampini c->compressedrow.i = NULL; 4272ed502f03SStefano Zampini c->compressedrow.rindex = NULL; 4273ed502f03SStefano Zampini Ccusp->workVector = NULL; 4274ed502f03SStefano Zampini Ccusp->nrows = m; 4275ed502f03SStefano Zampini Ccusp->mat = Cmat; 4276ed502f03SStefano Zampini Ccusp->mat->mat = Ccsr; 4277ed502f03SStefano Zampini Ccsr->num_rows = m; 4278ed502f03SStefano Zampini Ccsr->num_cols = n; 4279ed502f03SStefano Zampini stat = cusparseCreateMatDescr(&Cmat->descr);CHKERRCUSPARSE(stat); 4280ed502f03SStefano Zampini stat = cusparseSetMatIndexBase(Cmat->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 4281ed502f03SStefano Zampini stat = cusparseSetMatType(Cmat->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 4282ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->alpha_one),sizeof(PetscScalar));CHKERRCUDA(cerr); 4283ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_zero),sizeof(PetscScalar));CHKERRCUDA(cerr); 4284ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_one), sizeof(PetscScalar));CHKERRCUDA(cerr); 4285ed502f03SStefano Zampini cerr = cudaMemcpy(Cmat->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4286ed502f03SStefano Zampini cerr = cudaMemcpy(Cmat->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4287ed502f03SStefano Zampini cerr = cudaMemcpy(Cmat->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4288ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 4289ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 42901a2c6b5cSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTransposeForMult(A);CHKERRQ(ierr); 42911a2c6b5cSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTransposeForMult(B);CHKERRQ(ierr); 4292ed502f03SStefano Zampini if (!Acusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 4293ed502f03SStefano Zampini if (!Bcusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 4294ed502f03SStefano Zampini 4295ed502f03SStefano Zampini Acsr = (CsrMatrix*)Acusp->mat->mat; 4296ed502f03SStefano Zampini Bcsr = (CsrMatrix*)Bcusp->mat->mat; 4297ed502f03SStefano Zampini Annz = (PetscInt)Acsr->column_indices->size(); 4298ed502f03SStefano Zampini Bnnz = (PetscInt)Bcsr->column_indices->size(); 4299ed502f03SStefano Zampini c->nz = Annz + Bnnz; 4300ed502f03SStefano Zampini Ccsr->row_offsets = new THRUSTINTARRAY32(m+1); 4301ed502f03SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 4302ed502f03SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 4303ed502f03SStefano Zampini Ccsr->num_entries = c->nz; 4304ed502f03SStefano Zampini Ccusp->cooPerm = new THRUSTINTARRAY(c->nz); 4305ed502f03SStefano Zampini if (c->nz) { 43062ed87e7eSStefano Zampini auto Acoo = new THRUSTINTARRAY32(Annz); 43072ed87e7eSStefano Zampini auto Bcoo = new THRUSTINTARRAY32(Bnnz); 43082ed87e7eSStefano Zampini auto Ccoo = new THRUSTINTARRAY32(c->nz); 43092ed87e7eSStefano Zampini THRUSTINTARRAY32 *Aroff,*Broff; 43102ed87e7eSStefano Zampini 4311ed502f03SStefano Zampini if (a->compressedrow.use) { /* need full row offset */ 4312ed502f03SStefano Zampini if (!Acusp->rowoffsets_gpu) { 4313ed502f03SStefano Zampini Acusp->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n + 1); 4314ed502f03SStefano Zampini Acusp->rowoffsets_gpu->assign(a->i,a->i + A->rmap->n + 1); 4315ed502f03SStefano Zampini ierr = PetscLogCpuToGpu((A->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 4316ed502f03SStefano Zampini } 43172ed87e7eSStefano Zampini Aroff = Acusp->rowoffsets_gpu; 43182ed87e7eSStefano Zampini } else Aroff = Acsr->row_offsets; 4319ed502f03SStefano Zampini if (b->compressedrow.use) { /* need full row offset */ 4320ed502f03SStefano Zampini if (!Bcusp->rowoffsets_gpu) { 4321ed502f03SStefano Zampini Bcusp->rowoffsets_gpu = new THRUSTINTARRAY32(B->rmap->n + 1); 4322ed502f03SStefano Zampini Bcusp->rowoffsets_gpu->assign(b->i,b->i + B->rmap->n + 1); 4323ed502f03SStefano Zampini ierr = PetscLogCpuToGpu((B->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 4324ed502f03SStefano Zampini } 43252ed87e7eSStefano Zampini Broff = Bcusp->rowoffsets_gpu; 43262ed87e7eSStefano Zampini } else Broff = Bcsr->row_offsets; 4327ed502f03SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 43282ed87e7eSStefano Zampini stat = cusparseXcsr2coo(Acusp->handle, 43292ed87e7eSStefano Zampini Aroff->data().get(), 43302ed87e7eSStefano Zampini Annz, 43312ed87e7eSStefano Zampini m, 43322ed87e7eSStefano Zampini Acoo->data().get(), 43332ed87e7eSStefano Zampini CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 4334ed502f03SStefano Zampini stat = cusparseXcsr2coo(Bcusp->handle, 43352ed87e7eSStefano Zampini Broff->data().get(), 4336ed502f03SStefano Zampini Bnnz, 4337ed502f03SStefano Zampini m, 43382ed87e7eSStefano Zampini Bcoo->data().get(), 4339ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 43402ed87e7eSStefano Zampini /* Issues when using bool with large matrices on SUMMIT 10.2.89 */ 43412ed87e7eSStefano Zampini auto Aperm = thrust::make_constant_iterator(1); 43422ed87e7eSStefano Zampini auto Bperm = thrust::make_constant_iterator(0); 43438909a122SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(10,0,0) 4344ed502f03SStefano Zampini auto Bcib = thrust::make_transform_iterator(Bcsr->column_indices->begin(),Shift(A->cmap->n)); 4345ed502f03SStefano Zampini auto Bcie = thrust::make_transform_iterator(Bcsr->column_indices->end(),Shift(A->cmap->n)); 43468909a122SStefano Zampini #else 43478909a122SStefano Zampini /* there are issues instantiating the merge operation using a transform iterator for the columns of B */ 43488909a122SStefano Zampini auto Bcib = Bcsr->column_indices->begin(); 43498909a122SStefano Zampini auto Bcie = Bcsr->column_indices->end(); 43508909a122SStefano Zampini thrust::transform(Bcib,Bcie,Bcib,Shift(A->cmap->n)); 43518909a122SStefano Zampini #endif 43522ed87e7eSStefano Zampini auto wPerm = new THRUSTINTARRAY32(Annz+Bnnz); 43532ed87e7eSStefano Zampini auto Azb = thrust::make_zip_iterator(thrust::make_tuple(Acoo->begin(),Acsr->column_indices->begin(),Acsr->values->begin(),Aperm)); 43542ed87e7eSStefano Zampini auto Aze = thrust::make_zip_iterator(thrust::make_tuple(Acoo->end(),Acsr->column_indices->end(),Acsr->values->end(),Aperm)); 43552ed87e7eSStefano Zampini auto Bzb = thrust::make_zip_iterator(thrust::make_tuple(Bcoo->begin(),Bcib,Bcsr->values->begin(),Bperm)); 43562ed87e7eSStefano Zampini auto Bze = thrust::make_zip_iterator(thrust::make_tuple(Bcoo->end(),Bcie,Bcsr->values->end(),Bperm)); 43572ed87e7eSStefano Zampini auto Czb = thrust::make_zip_iterator(thrust::make_tuple(Ccoo->begin(),Ccsr->column_indices->begin(),Ccsr->values->begin(),wPerm->begin())); 4358ed502f03SStefano Zampini auto p1 = Ccusp->cooPerm->begin(); 4359ed502f03SStefano Zampini auto p2 = Ccusp->cooPerm->begin(); 4360ed502f03SStefano Zampini thrust::advance(p2,Annz); 43612ed87e7eSStefano Zampini PetscStackCallThrust(thrust::merge(thrust::device,Azb,Aze,Bzb,Bze,Czb,IJCompare4())); 43628909a122SStefano Zampini #if PETSC_PKG_CUDA_VERSION_LT(10,0,0) 43638909a122SStefano Zampini thrust::transform(Bcib,Bcie,Bcib,Shift(-A->cmap->n)); 43648909a122SStefano Zampini #endif 43652ed87e7eSStefano Zampini auto cci = thrust::make_counting_iterator(zero); 43662ed87e7eSStefano Zampini auto cce = thrust::make_counting_iterator(c->nz); 43672ed87e7eSStefano Zampini #if 0 //Errors on SUMMIT cuda 11.1.0 43682ed87e7eSStefano Zampini PetscStackCallThrust(thrust::partition_copy(thrust::device,cci,cce,wPerm->begin(),p1,p2,thrust::identity<int>())); 43692ed87e7eSStefano Zampini #else 43702ed87e7eSStefano Zampini auto pred = thrust::identity<int>(); 43712ed87e7eSStefano Zampini PetscStackCallThrust(thrust::copy_if(thrust::device,cci,cce,wPerm->begin(),p1,pred)); 43722ed87e7eSStefano Zampini PetscStackCallThrust(thrust::remove_copy_if(thrust::device,cci,cce,wPerm->begin(),p2,pred)); 43732ed87e7eSStefano Zampini #endif 4374ed502f03SStefano Zampini stat = cusparseXcoo2csr(Ccusp->handle, 43752ed87e7eSStefano Zampini Ccoo->data().get(), 4376ed502f03SStefano Zampini c->nz, 4377ed502f03SStefano Zampini m, 4378ed502f03SStefano Zampini Ccsr->row_offsets->data().get(), 4379ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 4380ed502f03SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 43812ed87e7eSStefano Zampini delete wPerm; 43822ed87e7eSStefano Zampini delete Acoo; 43832ed87e7eSStefano Zampini delete Bcoo; 43842ed87e7eSStefano Zampini delete Ccoo; 4385ed502f03SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 4386ed502f03SStefano Zampini stat = cusparseCreateCsr(&Cmat->matDescr, Ccsr->num_rows, Ccsr->num_cols, Ccsr->num_entries, 4387ed502f03SStefano Zampini Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get(), Ccsr->values->data().get(), 4388ed502f03SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 4389ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 4390ed502f03SStefano Zampini #endif 43911a2c6b5cSJunchao Zhang if (A->form_explicit_transpose && B->form_explicit_transpose) { /* if A and B have the transpose, generate C transpose too */ 4392ed502f03SStefano Zampini PetscBool AT = Acusp->matTranspose ? PETSC_TRUE : PETSC_FALSE, BT = Bcusp->matTranspose ? PETSC_TRUE : PETSC_FALSE; 4393ed502f03SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *CmatT = new Mat_SeqAIJCUSPARSEMultStruct; 4394ed502f03SStefano Zampini CsrMatrix *CcsrT = new CsrMatrix; 4395ed502f03SStefano Zampini CsrMatrix *AcsrT = AT ? (CsrMatrix*)Acusp->matTranspose->mat : NULL; 4396ed502f03SStefano Zampini CsrMatrix *BcsrT = BT ? (CsrMatrix*)Bcusp->matTranspose->mat : NULL; 4397ed502f03SStefano Zampini 43981a2c6b5cSJunchao Zhang (*C)->form_explicit_transpose = PETSC_TRUE; 43991a2c6b5cSJunchao Zhang (*C)->transupdated = PETSC_TRUE; 4400a49f1ed0SStefano Zampini Ccusp->rowoffsets_gpu = NULL; 4401ed502f03SStefano Zampini CmatT->cprowIndices = NULL; 4402ed502f03SStefano Zampini CmatT->mat = CcsrT; 4403ed502f03SStefano Zampini CcsrT->num_rows = n; 4404ed502f03SStefano Zampini CcsrT->num_cols = m; 4405ed502f03SStefano Zampini CcsrT->num_entries = c->nz; 4406ed502f03SStefano Zampini 4407ed502f03SStefano Zampini CcsrT->row_offsets = new THRUSTINTARRAY32(n+1); 4408ed502f03SStefano Zampini CcsrT->column_indices = new THRUSTINTARRAY32(c->nz); 4409ed502f03SStefano Zampini CcsrT->values = new THRUSTARRAY(c->nz); 4410ed502f03SStefano Zampini 4411ed502f03SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 4412ed502f03SStefano Zampini auto rT = CcsrT->row_offsets->begin(); 4413ed502f03SStefano Zampini if (AT) { 4414ed502f03SStefano Zampini rT = thrust::copy(AcsrT->row_offsets->begin(),AcsrT->row_offsets->end(),rT); 4415ed502f03SStefano Zampini thrust::advance(rT,-1); 4416ed502f03SStefano Zampini } 4417ed502f03SStefano Zampini if (BT) { 4418ed502f03SStefano Zampini auto titb = thrust::make_transform_iterator(BcsrT->row_offsets->begin(),Shift(a->nz)); 4419ed502f03SStefano Zampini auto tite = thrust::make_transform_iterator(BcsrT->row_offsets->end(),Shift(a->nz)); 4420ed502f03SStefano Zampini thrust::copy(titb,tite,rT); 4421ed502f03SStefano Zampini } 4422ed502f03SStefano Zampini auto cT = CcsrT->column_indices->begin(); 4423ed502f03SStefano Zampini if (AT) cT = thrust::copy(AcsrT->column_indices->begin(),AcsrT->column_indices->end(),cT); 4424ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->column_indices->begin(),BcsrT->column_indices->end(),cT); 4425ed502f03SStefano Zampini auto vT = CcsrT->values->begin(); 4426ed502f03SStefano Zampini if (AT) vT = thrust::copy(AcsrT->values->begin(),AcsrT->values->end(),vT); 4427ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->values->begin(),BcsrT->values->end(),vT); 4428ed502f03SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 4429ed502f03SStefano Zampini 4430ed502f03SStefano Zampini stat = cusparseCreateMatDescr(&CmatT->descr);CHKERRCUSPARSE(stat); 4431ed502f03SStefano Zampini stat = cusparseSetMatIndexBase(CmatT->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 4432ed502f03SStefano Zampini stat = cusparseSetMatType(CmatT->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 4433ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(CmatT->alpha_one),sizeof(PetscScalar));CHKERRCUDA(cerr); 4434ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(CmatT->beta_zero),sizeof(PetscScalar));CHKERRCUDA(cerr); 4435ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(CmatT->beta_one), sizeof(PetscScalar));CHKERRCUDA(cerr); 4436ed502f03SStefano Zampini cerr = cudaMemcpy(CmatT->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4437ed502f03SStefano Zampini cerr = cudaMemcpy(CmatT->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4438ed502f03SStefano Zampini cerr = cudaMemcpy(CmatT->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4439ed502f03SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 4440ed502f03SStefano Zampini stat = cusparseCreateCsr(&CmatT->matDescr, CcsrT->num_rows, CcsrT->num_cols, CcsrT->num_entries, 4441ed502f03SStefano Zampini CcsrT->row_offsets->data().get(), CcsrT->column_indices->data().get(), CcsrT->values->data().get(), 4442ed502f03SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 4443ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 4444ed502f03SStefano Zampini #endif 4445ed502f03SStefano Zampini Ccusp->matTranspose = CmatT; 4446ed502f03SStefano Zampini } 4447ed502f03SStefano Zampini } 4448ed502f03SStefano Zampini 4449ed502f03SStefano Zampini c->singlemalloc = PETSC_FALSE; 4450ed502f03SStefano Zampini c->free_a = PETSC_TRUE; 4451ed502f03SStefano Zampini c->free_ij = PETSC_TRUE; 4452ed502f03SStefano Zampini ierr = PetscMalloc1(m+1,&c->i);CHKERRQ(ierr); 4453ed502f03SStefano Zampini ierr = PetscMalloc1(c->nz,&c->j);CHKERRQ(ierr); 4454ed502f03SStefano Zampini if (PetscDefined(USE_64BIT_INDICES)) { /* 32 to 64 bit conversion on the GPU and then copy to host (lazy) */ 4455ed502f03SStefano Zampini THRUSTINTARRAY ii(Ccsr->row_offsets->size()); 4456ed502f03SStefano Zampini THRUSTINTARRAY jj(Ccsr->column_indices->size()); 4457ed502f03SStefano Zampini ii = *Ccsr->row_offsets; 4458ed502f03SStefano Zampini jj = *Ccsr->column_indices; 4459ed502f03SStefano Zampini cerr = cudaMemcpy(c->i,ii.data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4460ed502f03SStefano Zampini cerr = cudaMemcpy(c->j,jj.data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4461ed502f03SStefano Zampini } else { 4462ed502f03SStefano Zampini cerr = cudaMemcpy(c->i,Ccsr->row_offsets->data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4463ed502f03SStefano Zampini cerr = cudaMemcpy(c->j,Ccsr->column_indices->data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4464ed502f03SStefano Zampini } 4465ed502f03SStefano Zampini ierr = PetscLogGpuToCpu((Ccsr->column_indices->size() + Ccsr->row_offsets->size())*sizeof(PetscInt));CHKERRQ(ierr); 4466ed502f03SStefano Zampini ierr = PetscMalloc1(m,&c->ilen);CHKERRQ(ierr); 4467ed502f03SStefano Zampini ierr = PetscMalloc1(m,&c->imax);CHKERRQ(ierr); 4468ed502f03SStefano Zampini c->maxnz = c->nz; 4469ed502f03SStefano Zampini c->nonzerorowcnt = 0; 4470ed502f03SStefano Zampini c->rmax = 0; 4471ed502f03SStefano Zampini for (i = 0; i < m; i++) { 4472ed502f03SStefano Zampini const PetscInt nn = c->i[i+1] - c->i[i]; 4473ed502f03SStefano Zampini c->ilen[i] = c->imax[i] = nn; 4474ed502f03SStefano Zampini c->nonzerorowcnt += (PetscInt)!!nn; 4475ed502f03SStefano Zampini c->rmax = PetscMax(c->rmax,nn); 4476ed502f03SStefano Zampini } 4477ed502f03SStefano Zampini ierr = MatMarkDiagonal_SeqAIJ(*C);CHKERRQ(ierr); 4478ed502f03SStefano Zampini ierr = PetscMalloc1(c->nz,&c->a);CHKERRQ(ierr); 4479ed502f03SStefano Zampini (*C)->nonzerostate++; 4480ed502f03SStefano Zampini ierr = PetscLayoutSetUp((*C)->rmap);CHKERRQ(ierr); 4481ed502f03SStefano Zampini ierr = PetscLayoutSetUp((*C)->cmap);CHKERRQ(ierr); 4482ed502f03SStefano Zampini Ccusp->nonzerostate = (*C)->nonzerostate; 4483ed502f03SStefano Zampini (*C)->preallocated = PETSC_TRUE; 4484ed502f03SStefano Zampini } else { 4485ed502f03SStefano Zampini if ((*C)->rmap->n != B->rmap->n) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Invalid number or rows %D != %D",(*C)->rmap->n,B->rmap->n); 4486ed502f03SStefano Zampini c = (Mat_SeqAIJ*)(*C)->data; 4487ed502f03SStefano Zampini if (c->nz) { 4488ed502f03SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)(*C)->spptr; 4489ed502f03SStefano Zampini if (!Ccusp->cooPerm) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cooPerm"); 4490ed502f03SStefano Zampini if (Ccusp->format == MAT_CUSPARSE_ELL || Ccusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 4491ed502f03SStefano Zampini if (Ccusp->nonzerostate != (*C)->nonzerostate) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Wrong nonzerostate"); 4492ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 4493ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 4494ed502f03SStefano Zampini if (!Acusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 4495ed502f03SStefano Zampini if (!Bcusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 4496ed502f03SStefano Zampini Acsr = (CsrMatrix*)Acusp->mat->mat; 4497ed502f03SStefano Zampini Bcsr = (CsrMatrix*)Bcusp->mat->mat; 4498ed502f03SStefano Zampini Ccsr = (CsrMatrix*)Ccusp->mat->mat; 4499ed502f03SStefano Zampini if (Acsr->num_entries != (PetscInt)Acsr->values->size()) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_COR,"A nnz %D != %D",Acsr->num_entries,(PetscInt)Acsr->values->size()); 4500ed502f03SStefano Zampini if (Bcsr->num_entries != (PetscInt)Bcsr->values->size()) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_COR,"B nnz %D != %D",Bcsr->num_entries,(PetscInt)Bcsr->values->size()); 4501ed502f03SStefano Zampini if (Ccsr->num_entries != (PetscInt)Ccsr->values->size()) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_COR,"C nnz %D != %D",Ccsr->num_entries,(PetscInt)Ccsr->values->size()); 4502ed502f03SStefano Zampini if (Ccsr->num_entries != Acsr->num_entries + Bcsr->num_entries) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_COR,"C nnz %D != %D + %D",Ccsr->num_entries,Acsr->num_entries,Bcsr->num_entries); 4503ed502f03SStefano Zampini if (Ccusp->cooPerm->size() != Ccsr->values->size()) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_COR,"permSize %D != %D",(PetscInt)Ccusp->cooPerm->size(),(PetscInt)Ccsr->values->size()); 4504ed502f03SStefano Zampini auto pmid = Ccusp->cooPerm->begin(); 4505ed502f03SStefano Zampini thrust::advance(pmid,Acsr->num_entries); 4506ed502f03SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 4507ed502f03SStefano Zampini auto zibait = thrust::make_zip_iterator(thrust::make_tuple(Acsr->values->begin(), 4508ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),Ccusp->cooPerm->begin()))); 4509ed502f03SStefano Zampini auto zieait = thrust::make_zip_iterator(thrust::make_tuple(Acsr->values->end(), 4510ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),pmid))); 4511ed502f03SStefano Zampini thrust::for_each(zibait,zieait,VecCUDAEquals()); 4512ed502f03SStefano Zampini auto zibbit = thrust::make_zip_iterator(thrust::make_tuple(Bcsr->values->begin(), 4513ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),pmid))); 4514ed502f03SStefano Zampini auto ziebit = thrust::make_zip_iterator(thrust::make_tuple(Bcsr->values->end(), 4515ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),Ccusp->cooPerm->end()))); 4516ed502f03SStefano Zampini thrust::for_each(zibbit,ziebit,VecCUDAEquals()); 4517a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(*C,PETSC_FALSE);CHKERRQ(ierr); 45181a2c6b5cSJunchao Zhang if (A->form_explicit_transpose && B->form_explicit_transpose && (*C)->form_explicit_transpose) { 4519ed502f03SStefano Zampini if (!Ccusp->matTranspose) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing transpose Mat_SeqAIJCUSPARSEMultStruct"); 4520ed502f03SStefano Zampini PetscBool AT = Acusp->matTranspose ? PETSC_TRUE : PETSC_FALSE, BT = Bcusp->matTranspose ? PETSC_TRUE : PETSC_FALSE; 4521ed502f03SStefano Zampini CsrMatrix *AcsrT = AT ? (CsrMatrix*)Acusp->matTranspose->mat : NULL; 4522ed502f03SStefano Zampini CsrMatrix *BcsrT = BT ? (CsrMatrix*)Bcusp->matTranspose->mat : NULL; 4523ed502f03SStefano Zampini CsrMatrix *CcsrT = (CsrMatrix*)Ccusp->matTranspose->mat; 4524ed502f03SStefano Zampini auto vT = CcsrT->values->begin(); 4525ed502f03SStefano Zampini if (AT) vT = thrust::copy(AcsrT->values->begin(),AcsrT->values->end(),vT); 4526ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->values->begin(),BcsrT->values->end(),vT); 45271a2c6b5cSJunchao Zhang (*C)->transupdated = PETSC_TRUE; 4528ed502f03SStefano Zampini } 4529ed502f03SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 4530ed502f03SStefano Zampini } 4531ed502f03SStefano Zampini } 4532ed502f03SStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)*C);CHKERRQ(ierr); 4533ed502f03SStefano Zampini (*C)->assembled = PETSC_TRUE; 4534ed502f03SStefano Zampini (*C)->was_assembled = PETSC_FALSE; 4535ed502f03SStefano Zampini (*C)->offloadmask = PETSC_OFFLOAD_GPU; 4536ed502f03SStefano Zampini PetscFunctionReturn(0); 4537ed502f03SStefano Zampini } 4538c215019aSStefano Zampini 4539c215019aSStefano Zampini static PetscErrorCode MatSeqAIJCopySubArray_SeqAIJCUSPARSE(Mat A, PetscInt n, const PetscInt idx[], PetscScalar v[]) 4540c215019aSStefano Zampini { 4541c215019aSStefano Zampini PetscErrorCode ierr; 4542c215019aSStefano Zampini bool dmem; 4543c215019aSStefano Zampini const PetscScalar *av; 4544c215019aSStefano Zampini cudaError_t cerr; 4545c215019aSStefano Zampini 4546c215019aSStefano Zampini PetscFunctionBegin; 4547c215019aSStefano Zampini dmem = isCudaMem(v); 4548c215019aSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArrayRead(A,&av);CHKERRQ(ierr); 4549c215019aSStefano Zampini if (n && idx) { 4550c215019aSStefano Zampini THRUSTINTARRAY widx(n); 4551c215019aSStefano Zampini widx.assign(idx,idx+n); 4552c215019aSStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscInt));CHKERRQ(ierr); 4553c215019aSStefano Zampini 4554c215019aSStefano Zampini THRUSTARRAY *w = NULL; 4555c215019aSStefano Zampini thrust::device_ptr<PetscScalar> dv; 4556c215019aSStefano Zampini if (dmem) { 4557c215019aSStefano Zampini dv = thrust::device_pointer_cast(v); 4558c215019aSStefano Zampini } else { 4559c215019aSStefano Zampini w = new THRUSTARRAY(n); 4560c215019aSStefano Zampini dv = w->data(); 4561c215019aSStefano Zampini } 4562c215019aSStefano Zampini thrust::device_ptr<const PetscScalar> dav = thrust::device_pointer_cast(av); 4563c215019aSStefano Zampini 4564c215019aSStefano Zampini auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(dav,widx.begin()),dv)); 4565c215019aSStefano Zampini auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(dav,widx.end()),dv+n)); 4566c215019aSStefano Zampini thrust::for_each(zibit,zieit,VecCUDAEquals()); 4567c215019aSStefano Zampini if (w) { 4568c215019aSStefano Zampini cerr = cudaMemcpy(v,w->data().get(),n*sizeof(PetscScalar),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4569c215019aSStefano Zampini } 4570c215019aSStefano Zampini delete w; 4571c215019aSStefano Zampini } else { 4572c215019aSStefano Zampini cerr = cudaMemcpy(v,av,n*sizeof(PetscScalar),dmem ? cudaMemcpyDeviceToDevice : cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4573c215019aSStefano Zampini } 4574c215019aSStefano Zampini if (!dmem) { ierr = PetscLogCpuToGpu(n*sizeof(PetscScalar));CHKERRQ(ierr); } 4575c215019aSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArrayRead(A,&av);CHKERRQ(ierr); 4576c215019aSStefano Zampini PetscFunctionReturn(0); 4577c215019aSStefano Zampini } 4578