19ae82921SPaul Mullowney /* 29ae82921SPaul Mullowney Defines the basic matrix operations for the AIJ (compressed row) 3fd7c363cSSatish Balay matrix storage format using the CUSPARSE library, 49ae82921SPaul Mullowney */ 5dced61a5SBarry Smith #define PETSC_SKIP_SPINLOCK 699acd6aaSStefano Zampini #define PETSC_SKIP_IMMINTRIN_H_CUDAWORKAROUND 1 79ae82921SPaul Mullowney 83d13b8fdSMatthew G. Knepley #include <petscconf.h> 93d13b8fdSMatthew G. Knepley #include <../src/mat/impls/aij/seq/aij.h> /*I "petscmat.h" I*/ 10087f3262SPaul Mullowney #include <../src/mat/impls/sbaij/seq/sbaij.h> 113d13b8fdSMatthew G. Knepley #include <../src/vec/vec/impls/dvecimpl.h> 12af0996ceSBarry Smith #include <petsc/private/vecimpl.h> 139ae82921SPaul Mullowney #undef VecType 143d13b8fdSMatthew G. Knepley #include <../src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h> 15a2cee5feSJed Brown #include <thrust/adjacent_difference.h> 16a0e72f99SJunchao Zhang #include <thrust/async/for_each.h> 17a2cee5feSJed Brown #include <thrust/iterator/constant_iterator.h> 18a2cee5feSJed Brown #include <thrust/remove.h> 19a2cee5feSJed Brown #include <thrust/sort.h> 20a2cee5feSJed Brown #include <thrust/unique.h> 21e8d2b73aSMark Adams 22e057df02SPaul Mullowney const char *const MatCUSPARSEStorageFormats[] = {"CSR","ELL","HYB","MatCUSPARSEStorageFormat","MAT_CUSPARSE_",0}; 23afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 24afb2bd1cSJunchao Zhang /* The following are copied from cusparse.h in CUDA-11.0. In MatCUSPARSESpMVAlgorithms[] etc, we copy them in 25afb2bd1cSJunchao Zhang 0-based integer value order, since we want to use PetscOptionsEnum() to parse user command line options for them. 26afb2bd1cSJunchao Zhang 27afb2bd1cSJunchao Zhang typedef enum { 28afb2bd1cSJunchao Zhang CUSPARSE_MV_ALG_DEFAULT = 0, 29afb2bd1cSJunchao Zhang CUSPARSE_COOMV_ALG = 1, 30afb2bd1cSJunchao Zhang CUSPARSE_CSRMV_ALG1 = 2, 31afb2bd1cSJunchao Zhang CUSPARSE_CSRMV_ALG2 = 3 32afb2bd1cSJunchao Zhang } cusparseSpMVAlg_t; 33afb2bd1cSJunchao Zhang 34afb2bd1cSJunchao Zhang typedef enum { 35afb2bd1cSJunchao Zhang CUSPARSE_MM_ALG_DEFAULT CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_ALG_DEFAULT) = 0, 36afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG1 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG1) = 1, 37afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG2 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG2) = 2, 38afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG3 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG3) = 3, 39afb2bd1cSJunchao Zhang CUSPARSE_CSRMM_ALG1 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_CSR_ALG1) = 4, 40afb2bd1cSJunchao Zhang CUSPARSE_SPMM_ALG_DEFAULT = 0, 41afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG1 = 1, 42afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG2 = 2, 43afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG3 = 3, 44afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG4 = 5, 45afb2bd1cSJunchao Zhang CUSPARSE_SPMM_CSR_ALG1 = 4, 46afb2bd1cSJunchao Zhang CUSPARSE_SPMM_CSR_ALG2 = 6, 47afb2bd1cSJunchao Zhang } cusparseSpMMAlg_t; 48afb2bd1cSJunchao Zhang 49afb2bd1cSJunchao Zhang typedef enum { 50afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG1 = 1, // faster than V2 (in general), deterministc 51afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG2 = 2 // low memory requirement, non-deterministc 52afb2bd1cSJunchao Zhang } cusparseCsr2CscAlg_t; 53afb2bd1cSJunchao Zhang */ 54afb2bd1cSJunchao Zhang const char *const MatCUSPARSESpMVAlgorithms[] = {"MV_ALG_DEFAULT","COOMV_ALG", "CSRMV_ALG1","CSRMV_ALG2", "cusparseSpMVAlg_t","CUSPARSE_",0}; 55afb2bd1cSJunchao Zhang const char *const MatCUSPARSESpMMAlgorithms[] = {"ALG_DEFAULT","COO_ALG1","COO_ALG2","COO_ALG3","CSR_ALG1","COO_ALG4","CSR_ALG2","cusparseSpMMAlg_t","CUSPARSE_SPMM_",0}; 56afb2bd1cSJunchao Zhang const char *const MatCUSPARSECsr2CscAlgorithms[] = {"INVALID"/*cusparse does not have enum 0! We created one*/,"ALG1","ALG2","cusparseCsr2CscAlg_t","CUSPARSE_CSR2CSC_",0}; 57afb2bd1cSJunchao Zhang #endif 589ae82921SPaul Mullowney 59087f3262SPaul Mullowney static PetscErrorCode MatICCFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,const MatFactorInfo*); 60087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,const MatFactorInfo*); 61087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorNumeric_SeqAIJCUSPARSE(Mat,Mat,const MatFactorInfo*); 62087f3262SPaul Mullowney 636fa9248bSJed Brown static PetscErrorCode MatILUFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,IS,const MatFactorInfo*); 646fa9248bSJed Brown static PetscErrorCode MatLUFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,IS,const MatFactorInfo*); 656fa9248bSJed Brown static PetscErrorCode MatLUFactorNumeric_SeqAIJCUSPARSE(Mat,Mat,const MatFactorInfo*); 66087f3262SPaul Mullowney 676fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE(Mat,Vec,Vec); 686fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE_NaturalOrdering(Mat,Vec,Vec); 696fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE(Mat,Vec,Vec); 706fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering(Mat,Vec,Vec); 714416b707SBarry Smith static PetscErrorCode MatSetFromOptions_SeqAIJCUSPARSE(PetscOptionItems *PetscOptionsObject,Mat); 72a587d139SMark static PetscErrorCode MatAXPY_SeqAIJCUSPARSE(Mat,PetscScalar,Mat,MatStructure); 7333c9ba73SStefano Zampini static PetscErrorCode MatScale_SeqAIJCUSPARSE(Mat,PetscScalar); 746fa9248bSJed Brown static PetscErrorCode MatMult_SeqAIJCUSPARSE(Mat,Vec,Vec); 756fa9248bSJed Brown static PetscErrorCode MatMultAdd_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec); 766fa9248bSJed Brown static PetscErrorCode MatMultTranspose_SeqAIJCUSPARSE(Mat,Vec,Vec); 776fa9248bSJed Brown static PetscErrorCode MatMultTransposeAdd_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec); 78e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTranspose_SeqAIJCUSPARSE(Mat,Vec,Vec); 79e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTransposeAdd_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec); 80e6e9a74fSStefano Zampini static PetscErrorCode MatMultAddKernel_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec,PetscBool,PetscBool); 819ae82921SPaul Mullowney 827f756511SDominic Meiser static PetscErrorCode CsrMatrix_Destroy(CsrMatrix**); 83470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSETriFactorStruct**); 84470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSEMultStruct**,MatCUSPARSEStorageFormat); 85470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSETriFactors_Destroy(Mat_SeqAIJCUSPARSETriFactors**); 86470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSE_Destroy(Mat_SeqAIJCUSPARSE**); 877f756511SDominic Meiser 8857181aedSStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSECopyFromGPU(Mat); 89a49f1ed0SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSEInvalidateTranspose(Mat,PetscBool); 9057181aedSStefano Zampini 91c215019aSStefano Zampini static PetscErrorCode MatSeqAIJCopySubArray_SeqAIJCUSPARSE(Mat,PetscInt,const PetscInt[],PetscScalar[]); 92219fbbafSJunchao Zhang static PetscErrorCode MatSetPreallocationCOO_SeqAIJCUSPARSE(Mat,PetscCount,const PetscInt[],const PetscInt[]); 93219fbbafSJunchao Zhang static PetscErrorCode MatSetValuesCOO_SeqAIJCUSPARSE(Mat,const PetscScalar[],InsertMode); 94c215019aSStefano Zampini 95b06137fdSPaul Mullowney PetscErrorCode MatCUSPARSESetStream(Mat A,const cudaStream_t stream) 96b06137fdSPaul Mullowney { 97b06137fdSPaul Mullowney cusparseStatus_t stat; 98b06137fdSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 99b06137fdSPaul Mullowney 100b06137fdSPaul Mullowney PetscFunctionBegin; 1012c71b3e2SJacob Faibussowitsch PetscCheckFalse(!cusparsestruct,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing spptr"); 102b06137fdSPaul Mullowney cusparsestruct->stream = stream; 10357d48284SJunchao Zhang stat = cusparseSetStream(cusparsestruct->handle,cusparsestruct->stream);CHKERRCUSPARSE(stat); 104b06137fdSPaul Mullowney PetscFunctionReturn(0); 105b06137fdSPaul Mullowney } 106b06137fdSPaul Mullowney 107b06137fdSPaul Mullowney PetscErrorCode MatCUSPARSESetHandle(Mat A,const cusparseHandle_t handle) 108b06137fdSPaul Mullowney { 109b06137fdSPaul Mullowney cusparseStatus_t stat; 110b06137fdSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 111b06137fdSPaul Mullowney 112b06137fdSPaul Mullowney PetscFunctionBegin; 1132c71b3e2SJacob Faibussowitsch PetscCheckFalse(!cusparsestruct,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing spptr"); 1146b1cf21dSAlejandro Lamas Daviña if (cusparsestruct->handle != handle) { 11516a2e217SAlejandro Lamas Daviña if (cusparsestruct->handle) { 11657d48284SJunchao Zhang stat = cusparseDestroy(cusparsestruct->handle);CHKERRCUSPARSE(stat); 11716a2e217SAlejandro Lamas Daviña } 118b06137fdSPaul Mullowney cusparsestruct->handle = handle; 1196b1cf21dSAlejandro Lamas Daviña } 12057d48284SJunchao Zhang stat = cusparseSetPointerMode(cusparsestruct->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 121b06137fdSPaul Mullowney PetscFunctionReturn(0); 122b06137fdSPaul Mullowney } 123b06137fdSPaul Mullowney 124b06137fdSPaul Mullowney PetscErrorCode MatCUSPARSEClearHandle(Mat A) 125b06137fdSPaul Mullowney { 126b06137fdSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 1277e8381f9SStefano Zampini PetscBool flg; 1287e8381f9SStefano Zampini PetscErrorCode ierr; 129ccdfe979SStefano Zampini 130b06137fdSPaul Mullowney PetscFunctionBegin; 1317e8381f9SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 1327e8381f9SStefano Zampini if (!flg || !cusparsestruct) PetscFunctionReturn(0); 133ccdfe979SStefano Zampini if (cusparsestruct->handle) cusparsestruct->handle = 0; 134b06137fdSPaul Mullowney PetscFunctionReturn(0); 135b06137fdSPaul Mullowney } 136b06137fdSPaul Mullowney 137ea799195SBarry Smith PetscErrorCode MatFactorGetSolverType_seqaij_cusparse(Mat A,MatSolverType *type) 1389ae82921SPaul Mullowney { 1399ae82921SPaul Mullowney PetscFunctionBegin; 1409ae82921SPaul Mullowney *type = MATSOLVERCUSPARSE; 1419ae82921SPaul Mullowney PetscFunctionReturn(0); 1429ae82921SPaul Mullowney } 1439ae82921SPaul Mullowney 144c708e6cdSJed Brown /*MC 145087f3262SPaul Mullowney MATSOLVERCUSPARSE = "cusparse" - A matrix type providing triangular solvers for seq matrices 146087f3262SPaul Mullowney on a single GPU of type, seqaijcusparse, aijcusparse, or seqaijcusp, aijcusp. Currently supported 147087f3262SPaul Mullowney algorithms are ILU(k) and ICC(k). Typically, deeper factorizations (larger k) results in poorer 148087f3262SPaul Mullowney performance in the triangular solves. Full LU, and Cholesky decompositions can be solved through the 149087f3262SPaul Mullowney CUSPARSE triangular solve algorithm. However, the performance can be quite poor and thus these 150087f3262SPaul Mullowney algorithms are not recommended. This class does NOT support direct solver operations. 151c708e6cdSJed Brown 1529ae82921SPaul Mullowney Level: beginner 153c708e6cdSJed Brown 1543ca39a21SBarry Smith .seealso: PCFactorSetMatSolverType(), MatSolverType, MatCreateSeqAIJCUSPARSE(), MATAIJCUSPARSE, MatCreateAIJCUSPARSE(), MatCUSPARSESetFormat(), MatCUSPARSEStorageFormat, MatCUSPARSEFormatOperation 155c708e6cdSJed Brown M*/ 1569ae82921SPaul Mullowney 15742c9c57cSBarry Smith PETSC_EXTERN PetscErrorCode MatGetFactor_seqaijcusparse_cusparse(Mat A,MatFactorType ftype,Mat *B) 1589ae82921SPaul Mullowney { 1599ae82921SPaul Mullowney PetscErrorCode ierr; 160bc3f50f2SPaul Mullowney PetscInt n = A->rmap->n; 1619ae82921SPaul Mullowney 1629ae82921SPaul Mullowney PetscFunctionBegin; 163bc3f50f2SPaul Mullowney ierr = MatCreate(PetscObjectComm((PetscObject)A),B);CHKERRQ(ierr); 164bc3f50f2SPaul Mullowney ierr = MatSetSizes(*B,n,n,n,n);CHKERRQ(ierr); 1652c7c0729SBarry Smith (*B)->factortype = ftype; 1669ae82921SPaul Mullowney ierr = MatSetType(*B,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 1672205254eSKarl Rupp 1689c1083e7SRichard Tran Mills if (A->boundtocpu && A->bindingpropagates) { ierr = MatBindToCPU(*B,PETSC_TRUE);CHKERRQ(ierr); } 169087f3262SPaul Mullowney if (ftype == MAT_FACTOR_LU || ftype == MAT_FACTOR_ILU || ftype == MAT_FACTOR_ILUDT) { 17033d57670SJed Brown ierr = MatSetBlockSizesFromMats(*B,A,A);CHKERRQ(ierr); 1719c1083e7SRichard Tran Mills if (!A->boundtocpu) { 1729ae82921SPaul Mullowney (*B)->ops->ilufactorsymbolic = MatILUFactorSymbolic_SeqAIJCUSPARSE; 1739ae82921SPaul Mullowney (*B)->ops->lufactorsymbolic = MatLUFactorSymbolic_SeqAIJCUSPARSE; 1749c1083e7SRichard Tran Mills } else { 1759c1083e7SRichard Tran Mills (*B)->ops->ilufactorsymbolic = MatILUFactorSymbolic_SeqAIJ; 1769c1083e7SRichard Tran Mills (*B)->ops->lufactorsymbolic = MatLUFactorSymbolic_SeqAIJ; 1779c1083e7SRichard Tran Mills } 1784ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGND,(char**)&(*B)->preferredordering[MAT_FACTOR_LU]);CHKERRQ(ierr); 1794ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGNATURAL,(char**)&(*B)->preferredordering[MAT_FACTOR_ILU]);CHKERRQ(ierr); 1804ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGNATURAL,(char**)&(*B)->preferredordering[MAT_FACTOR_ILUDT]);CHKERRQ(ierr); 181087f3262SPaul Mullowney } else if (ftype == MAT_FACTOR_CHOLESKY || ftype == MAT_FACTOR_ICC) { 1829c1083e7SRichard Tran Mills if (!A->boundtocpu) { 183087f3262SPaul Mullowney (*B)->ops->iccfactorsymbolic = MatICCFactorSymbolic_SeqAIJCUSPARSE; 184087f3262SPaul Mullowney (*B)->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SeqAIJCUSPARSE; 1859c1083e7SRichard Tran Mills } else { 1869c1083e7SRichard Tran Mills (*B)->ops->iccfactorsymbolic = MatICCFactorSymbolic_SeqAIJ; 1879c1083e7SRichard Tran Mills (*B)->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SeqAIJ; 1889c1083e7SRichard Tran Mills } 1894ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGND,(char**)&(*B)->preferredordering[MAT_FACTOR_CHOLESKY]);CHKERRQ(ierr); 1904ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGNATURAL,(char**)&(*B)->preferredordering[MAT_FACTOR_ICC]);CHKERRQ(ierr); 1919ae82921SPaul Mullowney } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Factor type not supported for CUSPARSE Matrix Types"); 192bc3f50f2SPaul Mullowney 193fa03d054SJed Brown ierr = MatSeqAIJSetPreallocation(*B,MAT_SKIP_ALLOCATION,NULL);CHKERRQ(ierr); 1944ac6704cSBarry Smith (*B)->canuseordering = PETSC_TRUE; 1953ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)(*B),"MatFactorGetSolverType_C",MatFactorGetSolverType_seqaij_cusparse);CHKERRQ(ierr); 1969ae82921SPaul Mullowney PetscFunctionReturn(0); 1979ae82921SPaul Mullowney } 1989ae82921SPaul Mullowney 199bc3f50f2SPaul Mullowney PETSC_INTERN PetscErrorCode MatCUSPARSESetFormat_SeqAIJCUSPARSE(Mat A,MatCUSPARSEFormatOperation op,MatCUSPARSEStorageFormat format) 200ca45077fSPaul Mullowney { 201aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 2026e111a19SKarl Rupp 203ca45077fSPaul Mullowney PetscFunctionBegin; 204ca45077fSPaul Mullowney switch (op) { 205e057df02SPaul Mullowney case MAT_CUSPARSE_MULT: 206aa372e3fSPaul Mullowney cusparsestruct->format = format; 207ca45077fSPaul Mullowney break; 208e057df02SPaul Mullowney case MAT_CUSPARSE_ALL: 209aa372e3fSPaul Mullowney cusparsestruct->format = format; 210ca45077fSPaul Mullowney break; 211ca45077fSPaul Mullowney default: 21298921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"unsupported operation %d for MatCUSPARSEFormatOperation. MAT_CUSPARSE_MULT and MAT_CUSPARSE_ALL are currently supported.",op); 213ca45077fSPaul Mullowney } 214ca45077fSPaul Mullowney PetscFunctionReturn(0); 215ca45077fSPaul Mullowney } 2169ae82921SPaul Mullowney 217e057df02SPaul Mullowney /*@ 218e057df02SPaul Mullowney MatCUSPARSESetFormat - Sets the storage format of CUSPARSE matrices for a particular 219e057df02SPaul Mullowney operation. Only the MatMult operation can use different GPU storage formats 220aa372e3fSPaul Mullowney for MPIAIJCUSPARSE matrices. 221e057df02SPaul Mullowney Not Collective 222e057df02SPaul Mullowney 223e057df02SPaul Mullowney Input Parameters: 2248468deeeSKarl Rupp + A - Matrix of type SEQAIJCUSPARSE 22536d62e41SPaul Mullowney . op - MatCUSPARSEFormatOperation. SEQAIJCUSPARSE matrices support MAT_CUSPARSE_MULT and MAT_CUSPARSE_ALL. MPIAIJCUSPARSE matrices support MAT_CUSPARSE_MULT_DIAG, MAT_CUSPARSE_MULT_OFFDIAG, and MAT_CUSPARSE_ALL. 2262692e278SPaul Mullowney - format - MatCUSPARSEStorageFormat (one of MAT_CUSPARSE_CSR, MAT_CUSPARSE_ELL, MAT_CUSPARSE_HYB. The latter two require CUDA 4.2) 227e057df02SPaul Mullowney 228e057df02SPaul Mullowney Output Parameter: 229e057df02SPaul Mullowney 230e057df02SPaul Mullowney Level: intermediate 231e057df02SPaul Mullowney 2328468deeeSKarl Rupp .seealso: MatCUSPARSEStorageFormat, MatCUSPARSEFormatOperation 233e057df02SPaul Mullowney @*/ 234e057df02SPaul Mullowney PetscErrorCode MatCUSPARSESetFormat(Mat A,MatCUSPARSEFormatOperation op,MatCUSPARSEStorageFormat format) 235e057df02SPaul Mullowney { 236e057df02SPaul Mullowney PetscErrorCode ierr; 2376e111a19SKarl Rupp 238e057df02SPaul Mullowney PetscFunctionBegin; 239e057df02SPaul Mullowney PetscValidHeaderSpecific(A, MAT_CLASSID,1); 240e057df02SPaul Mullowney ierr = PetscTryMethod(A,"MatCUSPARSESetFormat_C",(Mat,MatCUSPARSEFormatOperation,MatCUSPARSEStorageFormat),(A,op,format));CHKERRQ(ierr); 241e057df02SPaul Mullowney PetscFunctionReturn(0); 242e057df02SPaul Mullowney } 243e057df02SPaul Mullowney 244365b711fSMark Adams PETSC_INTERN PetscErrorCode MatCUSPARSESetUseCPUSolve_SeqAIJCUSPARSE(Mat A,PetscBool use_cpu) 245365b711fSMark Adams { 246365b711fSMark Adams Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 247365b711fSMark Adams 248365b711fSMark Adams PetscFunctionBegin; 249365b711fSMark Adams cusparsestruct->use_cpu_solve = use_cpu; 250365b711fSMark Adams PetscFunctionReturn(0); 251365b711fSMark Adams } 252365b711fSMark Adams 253365b711fSMark Adams /*@ 254365b711fSMark Adams MatCUSPARSESetUseCPUSolve - Sets use CPU MatSolve. 255365b711fSMark Adams 256365b711fSMark Adams Input Parameters: 257365b711fSMark Adams + A - Matrix of type SEQAIJCUSPARSE 258365b711fSMark Adams - use_cpu - set flag for using the built-in CPU MatSolve 259365b711fSMark Adams 260365b711fSMark Adams Output Parameter: 261365b711fSMark Adams 262365b711fSMark Adams Notes: 263365b711fSMark Adams The cuSparse LU solver currently computes the factors with the built-in CPU method 264365b711fSMark Adams and moves the factors to the GPU for the solve. We have observed better performance keeping the data on the CPU and computing the solve there. 265365b711fSMark Adams This method to specify if the solve is done on the CPU or GPU (GPU is the default). 266365b711fSMark Adams 267365b711fSMark Adams Level: intermediate 268365b711fSMark Adams 269365b711fSMark Adams .seealso: MatCUSPARSEStorageFormat, MatCUSPARSEFormatOperation 270365b711fSMark Adams @*/ 271365b711fSMark Adams PetscErrorCode MatCUSPARSESetUseCPUSolve(Mat A,PetscBool use_cpu) 272365b711fSMark Adams { 273365b711fSMark Adams PetscErrorCode ierr; 274365b711fSMark Adams 275365b711fSMark Adams PetscFunctionBegin; 276365b711fSMark Adams PetscValidHeaderSpecific(A, MAT_CLASSID,1); 277365b711fSMark Adams ierr = PetscTryMethod(A,"MatCUSPARSESetUseCPUSolve_C",(Mat,PetscBool),(A,use_cpu));CHKERRQ(ierr); 278365b711fSMark Adams PetscFunctionReturn(0); 279365b711fSMark Adams } 280365b711fSMark Adams 2811a2c6b5cSJunchao Zhang PetscErrorCode MatSetOption_SeqAIJCUSPARSE(Mat A,MatOption op,PetscBool flg) 282e6e9a74fSStefano Zampini { 283e6e9a74fSStefano Zampini PetscErrorCode ierr; 284e6e9a74fSStefano Zampini 285e6e9a74fSStefano Zampini PetscFunctionBegin; 2861a2c6b5cSJunchao Zhang switch (op) { 2871a2c6b5cSJunchao Zhang case MAT_FORM_EXPLICIT_TRANSPOSE: 2881a2c6b5cSJunchao Zhang /* need to destroy the transpose matrix if present to prevent from logic errors if flg is set to true later */ 2891a2c6b5cSJunchao Zhang if (A->form_explicit_transpose && !flg) {ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr);} 2901a2c6b5cSJunchao Zhang A->form_explicit_transpose = flg; 2911a2c6b5cSJunchao Zhang break; 2921a2c6b5cSJunchao Zhang default: 2931a2c6b5cSJunchao Zhang ierr = MatSetOption_SeqAIJ(A,op,flg);CHKERRQ(ierr); 2941a2c6b5cSJunchao Zhang break; 295e6e9a74fSStefano Zampini } 296e6e9a74fSStefano Zampini PetscFunctionReturn(0); 297e6e9a74fSStefano Zampini } 298e6e9a74fSStefano Zampini 299bddcd29dSMark Adams static PetscErrorCode MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(Mat A); 300bddcd29dSMark Adams 301bddcd29dSMark Adams static PetscErrorCode MatLUFactorNumeric_SeqAIJCUSPARSE(Mat B,Mat A,const MatFactorInfo *info) 302bddcd29dSMark Adams { 303bddcd29dSMark Adams Mat_SeqAIJ *b = (Mat_SeqAIJ*)B->data; 304bddcd29dSMark Adams IS isrow = b->row,iscol = b->col; 305bddcd29dSMark Adams PetscBool row_identity,col_identity; 306365b711fSMark Adams Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)B->spptr; 307bddcd29dSMark Adams PetscErrorCode ierr; 308bddcd29dSMark Adams 309bddcd29dSMark Adams PetscFunctionBegin; 310bddcd29dSMark Adams ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 311bddcd29dSMark Adams ierr = MatLUFactorNumeric_SeqAIJ(B,A,info);CHKERRQ(ierr); 312bddcd29dSMark Adams B->offloadmask = PETSC_OFFLOAD_CPU; 313bddcd29dSMark Adams /* determine which version of MatSolve needs to be used. */ 314bddcd29dSMark Adams ierr = ISIdentity(isrow,&row_identity);CHKERRQ(ierr); 315bddcd29dSMark Adams ierr = ISIdentity(iscol,&col_identity);CHKERRQ(ierr); 316bddcd29dSMark Adams if (row_identity && col_identity) { 317365b711fSMark Adams if (!cusparsestruct->use_cpu_solve) { 318bddcd29dSMark Adams B->ops->solve = MatSolve_SeqAIJCUSPARSE_NaturalOrdering; 319bddcd29dSMark Adams B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering; 320365b711fSMark Adams } 321bddcd29dSMark Adams B->ops->matsolve = NULL; 322bddcd29dSMark Adams B->ops->matsolvetranspose = NULL; 323bddcd29dSMark Adams } else { 324365b711fSMark Adams if (!cusparsestruct->use_cpu_solve) { 325bddcd29dSMark Adams B->ops->solve = MatSolve_SeqAIJCUSPARSE; 326bddcd29dSMark Adams B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE; 327365b711fSMark Adams } 328bddcd29dSMark Adams B->ops->matsolve = NULL; 329bddcd29dSMark Adams B->ops->matsolvetranspose = NULL; 330bddcd29dSMark Adams } 331bddcd29dSMark Adams 332bddcd29dSMark Adams /* get the triangular factors */ 333365b711fSMark Adams if (!cusparsestruct->use_cpu_solve) { 334bddcd29dSMark Adams ierr = MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(B);CHKERRQ(ierr); 335365b711fSMark Adams } 336bddcd29dSMark Adams PetscFunctionReturn(0); 337bddcd29dSMark Adams } 338bddcd29dSMark Adams 3394416b707SBarry Smith static PetscErrorCode MatSetFromOptions_SeqAIJCUSPARSE(PetscOptionItems *PetscOptionsObject,Mat A) 3409ae82921SPaul Mullowney { 3419ae82921SPaul Mullowney PetscErrorCode ierr; 342e057df02SPaul Mullowney MatCUSPARSEStorageFormat format; 3439ae82921SPaul Mullowney PetscBool flg; 344a183c035SDominic Meiser Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 3456e111a19SKarl Rupp 3469ae82921SPaul Mullowney PetscFunctionBegin; 347e55864a3SBarry Smith ierr = PetscOptionsHead(PetscOptionsObject,"SeqAIJCUSPARSE options");CHKERRQ(ierr); 3489ae82921SPaul Mullowney if (A->factortype == MAT_FACTOR_NONE) { 349e057df02SPaul Mullowney ierr = PetscOptionsEnum("-mat_cusparse_mult_storage_format","sets storage format of (seq)aijcusparse gpu matrices for SpMV", 350a183c035SDominic Meiser "MatCUSPARSESetFormat",MatCUSPARSEStorageFormats,(PetscEnum)cusparsestruct->format,(PetscEnum*)&format,&flg);CHKERRQ(ierr); 351afb2bd1cSJunchao Zhang if (flg) {ierr = MatCUSPARSESetFormat(A,MAT_CUSPARSE_MULT,format);CHKERRQ(ierr);} 352afb2bd1cSJunchao Zhang 3534c87dfd4SPaul Mullowney ierr = PetscOptionsEnum("-mat_cusparse_storage_format","sets storage format of (seq)aijcusparse gpu matrices for SpMV and TriSolve", 354a183c035SDominic Meiser "MatCUSPARSESetFormat",MatCUSPARSEStorageFormats,(PetscEnum)cusparsestruct->format,(PetscEnum*)&format,&flg);CHKERRQ(ierr); 355afb2bd1cSJunchao Zhang if (flg) {ierr = MatCUSPARSESetFormat(A,MAT_CUSPARSE_ALL,format);CHKERRQ(ierr);} 356365b711fSMark Adams ierr = PetscOptionsBool("-mat_cusparse_use_cpu_solve","Use CPU (I)LU solve","MatCUSPARSESetUseCPUSolve",cusparsestruct->use_cpu_solve,&cusparsestruct->use_cpu_solve,&flg);CHKERRQ(ierr); 357365b711fSMark Adams if (flg) {ierr = MatCUSPARSESetUseCPUSolve(A,cusparsestruct->use_cpu_solve);CHKERRQ(ierr);} 358afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 359afb2bd1cSJunchao Zhang ierr = PetscOptionsEnum("-mat_cusparse_spmv_alg","sets cuSPARSE algorithm used in sparse-mat dense-vector multiplication (SpMV)", 360afb2bd1cSJunchao Zhang "cusparseSpMVAlg_t",MatCUSPARSESpMVAlgorithms,(PetscEnum)cusparsestruct->spmvAlg,(PetscEnum*)&cusparsestruct->spmvAlg,&flg);CHKERRQ(ierr); 361afb2bd1cSJunchao Zhang /* If user did use this option, check its consistency with cuSPARSE, since PetscOptionsEnum() sets enum values based on their position in MatCUSPARSESpMVAlgorithms[] */ 3628efa179dSJose E. Roman #if PETSC_PKG_CUDA_VERSION_GE(11,2,0) 3632c71b3e2SJacob Faibussowitsch PetscCheckFalse(flg && CUSPARSE_SPMV_CSR_ALG1 != 2,PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseSpMVAlg_t has been changed but PETSc has not been updated accordingly"); 364a435da06SStefano Zampini #else 3652c71b3e2SJacob Faibussowitsch PetscCheckFalse(flg && CUSPARSE_CSRMV_ALG1 != 2,PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseSpMVAlg_t has been changed but PETSc has not been updated accordingly"); 366a435da06SStefano Zampini #endif 367afb2bd1cSJunchao Zhang ierr = PetscOptionsEnum("-mat_cusparse_spmm_alg","sets cuSPARSE algorithm used in sparse-mat dense-mat multiplication (SpMM)", 368afb2bd1cSJunchao Zhang "cusparseSpMMAlg_t",MatCUSPARSESpMMAlgorithms,(PetscEnum)cusparsestruct->spmmAlg,(PetscEnum*)&cusparsestruct->spmmAlg,&flg);CHKERRQ(ierr); 3692c71b3e2SJacob Faibussowitsch PetscCheckFalse(flg && CUSPARSE_SPMM_CSR_ALG1 != 4,PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseSpMMAlg_t has been changed but PETSc has not been updated accordingly"); 370afb2bd1cSJunchao Zhang 371afb2bd1cSJunchao Zhang ierr = PetscOptionsEnum("-mat_cusparse_csr2csc_alg","sets cuSPARSE algorithm used in converting CSR matrices to CSC matrices", 372afb2bd1cSJunchao Zhang "cusparseCsr2CscAlg_t",MatCUSPARSECsr2CscAlgorithms,(PetscEnum)cusparsestruct->csr2cscAlg,(PetscEnum*)&cusparsestruct->csr2cscAlg,&flg);CHKERRQ(ierr); 3732c71b3e2SJacob Faibussowitsch PetscCheckFalse(flg && CUSPARSE_CSR2CSC_ALG1 != 1,PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseCsr2CscAlg_t has been changed but PETSc has not been updated accordingly"); 374afb2bd1cSJunchao Zhang #endif 3754c87dfd4SPaul Mullowney } 3760af67c1bSStefano Zampini ierr = PetscOptionsTail();CHKERRQ(ierr); 3779ae82921SPaul Mullowney PetscFunctionReturn(0); 3789ae82921SPaul Mullowney } 3799ae82921SPaul Mullowney 3806fa9248bSJed Brown static PetscErrorCode MatILUFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS isrow,IS iscol,const MatFactorInfo *info) 3819ae82921SPaul Mullowney { 382da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 3839ae82921SPaul Mullowney PetscErrorCode ierr; 3849ae82921SPaul Mullowney 3859ae82921SPaul Mullowney PetscFunctionBegin; 386da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 3879ae82921SPaul Mullowney ierr = MatILUFactorSymbolic_SeqAIJ(B,A,isrow,iscol,info);CHKERRQ(ierr); 3889ae82921SPaul Mullowney B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJCUSPARSE; 3899ae82921SPaul Mullowney PetscFunctionReturn(0); 3909ae82921SPaul Mullowney } 3919ae82921SPaul Mullowney 3926fa9248bSJed Brown static PetscErrorCode MatLUFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS isrow,IS iscol,const MatFactorInfo *info) 3939ae82921SPaul Mullowney { 394da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 3959ae82921SPaul Mullowney PetscErrorCode ierr; 3969ae82921SPaul Mullowney 3979ae82921SPaul Mullowney PetscFunctionBegin; 398da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 3999ae82921SPaul Mullowney ierr = MatLUFactorSymbolic_SeqAIJ(B,A,isrow,iscol,info);CHKERRQ(ierr); 4009ae82921SPaul Mullowney B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJCUSPARSE; 4019ae82921SPaul Mullowney PetscFunctionReturn(0); 4029ae82921SPaul Mullowney } 4039ae82921SPaul Mullowney 404087f3262SPaul Mullowney static PetscErrorCode MatICCFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS perm,const MatFactorInfo *info) 405087f3262SPaul Mullowney { 406da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 407087f3262SPaul Mullowney PetscErrorCode ierr; 408087f3262SPaul Mullowney 409087f3262SPaul Mullowney PetscFunctionBegin; 410da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 411087f3262SPaul Mullowney ierr = MatICCFactorSymbolic_SeqAIJ(B,A,perm,info);CHKERRQ(ierr); 412087f3262SPaul Mullowney B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJCUSPARSE; 413087f3262SPaul Mullowney PetscFunctionReturn(0); 414087f3262SPaul Mullowney } 415087f3262SPaul Mullowney 416087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS perm,const MatFactorInfo *info) 417087f3262SPaul Mullowney { 418da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 419087f3262SPaul Mullowney PetscErrorCode ierr; 420087f3262SPaul Mullowney 421087f3262SPaul Mullowney PetscFunctionBegin; 422da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 423087f3262SPaul Mullowney ierr = MatCholeskyFactorSymbolic_SeqAIJ(B,A,perm,info);CHKERRQ(ierr); 424087f3262SPaul Mullowney B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJCUSPARSE; 425087f3262SPaul Mullowney PetscFunctionReturn(0); 426087f3262SPaul Mullowney } 427087f3262SPaul Mullowney 428087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEBuildILULowerTriMatrix(Mat A) 4299ae82921SPaul Mullowney { 4309ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 4319ae82921SPaul Mullowney PetscInt n = A->rmap->n; 4329ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 433aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 4349ae82921SPaul Mullowney cusparseStatus_t stat; 4359ae82921SPaul Mullowney const PetscInt *ai = a->i,*aj = a->j,*vi; 4369ae82921SPaul Mullowney const MatScalar *aa = a->a,*v; 4379ae82921SPaul Mullowney PetscInt *AiLo, *AjLo; 4389ae82921SPaul Mullowney PetscInt i,nz, nzLower, offset, rowOffset; 439b175d8bbSPaul Mullowney PetscErrorCode ierr; 44057d48284SJunchao Zhang cudaError_t cerr; 4419ae82921SPaul Mullowney 4429ae82921SPaul Mullowney PetscFunctionBegin; 443cf00fe3bSKarl Rupp if (!n) PetscFunctionReturn(0); 444c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 4459ae82921SPaul Mullowney try { 4469ae82921SPaul Mullowney /* first figure out the number of nonzeros in the lower triangular matrix including 1's on the diagonal. */ 4479ae82921SPaul Mullowney nzLower=n+ai[n]-ai[1]; 448da79fbbcSStefano Zampini if (!loTriFactor) { 4492cbc15d9SMark PetscScalar *AALo; 4502cbc15d9SMark 4512cbc15d9SMark cerr = cudaMallocHost((void**) &AALo, nzLower*sizeof(PetscScalar));CHKERRCUDA(cerr); 4529ae82921SPaul Mullowney 4539ae82921SPaul Mullowney /* Allocate Space for the lower triangular matrix */ 45457d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AiLo, (n+1)*sizeof(PetscInt));CHKERRCUDA(cerr); 45557d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AjLo, nzLower*sizeof(PetscInt));CHKERRCUDA(cerr); 4569ae82921SPaul Mullowney 4579ae82921SPaul Mullowney /* Fill the lower triangular matrix */ 4589ae82921SPaul Mullowney AiLo[0] = (PetscInt) 0; 4599ae82921SPaul Mullowney AiLo[n] = nzLower; 4609ae82921SPaul Mullowney AjLo[0] = (PetscInt) 0; 4619ae82921SPaul Mullowney AALo[0] = (MatScalar) 1.0; 4629ae82921SPaul Mullowney v = aa; 4639ae82921SPaul Mullowney vi = aj; 4649ae82921SPaul Mullowney offset = 1; 4659ae82921SPaul Mullowney rowOffset= 1; 4669ae82921SPaul Mullowney for (i=1; i<n; i++) { 4679ae82921SPaul Mullowney nz = ai[i+1] - ai[i]; 468e057df02SPaul Mullowney /* additional 1 for the term on the diagonal */ 4699ae82921SPaul Mullowney AiLo[i] = rowOffset; 4709ae82921SPaul Mullowney rowOffset += nz+1; 4719ae82921SPaul Mullowney 472580bdb30SBarry Smith ierr = PetscArraycpy(&(AjLo[offset]), vi, nz);CHKERRQ(ierr); 473580bdb30SBarry Smith ierr = PetscArraycpy(&(AALo[offset]), v, nz);CHKERRQ(ierr); 4749ae82921SPaul Mullowney 4759ae82921SPaul Mullowney offset += nz; 4769ae82921SPaul Mullowney AjLo[offset] = (PetscInt) i; 4779ae82921SPaul Mullowney AALo[offset] = (MatScalar) 1.0; 4789ae82921SPaul Mullowney offset += 1; 4799ae82921SPaul Mullowney 4809ae82921SPaul Mullowney v += nz; 4819ae82921SPaul Mullowney vi += nz; 4829ae82921SPaul Mullowney } 4832205254eSKarl Rupp 484aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 485da79fbbcSStefano Zampini ierr = PetscNew(&loTriFactor);CHKERRQ(ierr); 486da79fbbcSStefano Zampini loTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 487aa372e3fSPaul Mullowney /* Create the matrix description */ 48857d48284SJunchao Zhang stat = cusparseCreateMatDescr(&loTriFactor->descr);CHKERRCUSPARSE(stat); 48957d48284SJunchao Zhang stat = cusparseSetMatIndexBase(loTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 4901b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 491afb2bd1cSJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 492afb2bd1cSJunchao Zhang #else 49357d48284SJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 494afb2bd1cSJunchao Zhang #endif 49557d48284SJunchao Zhang stat = cusparseSetMatFillMode(loTriFactor->descr, CUSPARSE_FILL_MODE_LOWER);CHKERRCUSPARSE(stat); 49657d48284SJunchao Zhang stat = cusparseSetMatDiagType(loTriFactor->descr, CUSPARSE_DIAG_TYPE_UNIT);CHKERRCUSPARSE(stat); 497aa372e3fSPaul Mullowney 498aa372e3fSPaul Mullowney /* set the operation */ 499aa372e3fSPaul Mullowney loTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 500aa372e3fSPaul Mullowney 501aa372e3fSPaul Mullowney /* set the matrix */ 502aa372e3fSPaul Mullowney loTriFactor->csrMat = new CsrMatrix; 503aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows = n; 504aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols = n; 505aa372e3fSPaul Mullowney loTriFactor->csrMat->num_entries = nzLower; 506aa372e3fSPaul Mullowney 507aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(n+1); 508aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->assign(AiLo, AiLo+n+1); 509aa372e3fSPaul Mullowney 510aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(nzLower); 511aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->assign(AjLo, AjLo+nzLower); 512aa372e3fSPaul Mullowney 513aa372e3fSPaul Mullowney loTriFactor->csrMat->values = new THRUSTARRAY(nzLower); 514aa372e3fSPaul Mullowney loTriFactor->csrMat->values->assign(AALo, AALo+nzLower); 515aa372e3fSPaul Mullowney 516afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 517da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 518afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&loTriFactor->solveInfo);CHKERRCUSPARSE(stat); 5191b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 520afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, loTriFactor->solveOp, 521afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 522afb2bd1cSJunchao Zhang loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 523afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo, 524afb2bd1cSJunchao Zhang &loTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 525afb2bd1cSJunchao Zhang cerr = cudaMalloc(&loTriFactor->solveBuffer,loTriFactor->solveBufferSize);CHKERRCUDA(cerr); 526afb2bd1cSJunchao Zhang #endif 527afb2bd1cSJunchao Zhang 528aa372e3fSPaul Mullowney /* perform the solve analysis */ 529aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, loTriFactor->solveOp, 530aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 531aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 532d49cd2b7SBarry Smith loTriFactor->csrMat->column_indices->data().get(), 5331b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 534d49cd2b7SBarry Smith loTriFactor->solveInfo, 535d49cd2b7SBarry Smith loTriFactor->solvePolicy, loTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 536d49cd2b7SBarry Smith #else 537d49cd2b7SBarry Smith loTriFactor->solveInfo);CHKERRCUSPARSE(stat); 538afb2bd1cSJunchao Zhang #endif 539da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 540da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 541aa372e3fSPaul Mullowney 542da79fbbcSStefano Zampini /* assign the pointer */ 543aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->loTriFactorPtr = loTriFactor; 5442cbc15d9SMark loTriFactor->AA_h = AALo; 54557d48284SJunchao Zhang cerr = cudaFreeHost(AiLo);CHKERRCUDA(cerr); 54657d48284SJunchao Zhang cerr = cudaFreeHost(AjLo);CHKERRCUDA(cerr); 5474863603aSSatish Balay ierr = PetscLogCpuToGpu((n+1+nzLower)*sizeof(int)+nzLower*sizeof(PetscScalar));CHKERRQ(ierr); 548da79fbbcSStefano Zampini } else { /* update values only */ 5492cbc15d9SMark if (!loTriFactor->AA_h) { 5502cbc15d9SMark cerr = cudaMallocHost((void**) &loTriFactor->AA_h, nzLower*sizeof(PetscScalar));CHKERRCUDA(cerr); 5512cbc15d9SMark } 552da79fbbcSStefano Zampini /* Fill the lower triangular matrix */ 5532cbc15d9SMark loTriFactor->AA_h[0] = 1.0; 554da79fbbcSStefano Zampini v = aa; 555da79fbbcSStefano Zampini vi = aj; 556da79fbbcSStefano Zampini offset = 1; 557da79fbbcSStefano Zampini for (i=1; i<n; i++) { 558da79fbbcSStefano Zampini nz = ai[i+1] - ai[i]; 5592cbc15d9SMark ierr = PetscArraycpy(&(loTriFactor->AA_h[offset]), v, nz);CHKERRQ(ierr); 560da79fbbcSStefano Zampini offset += nz; 5612cbc15d9SMark loTriFactor->AA_h[offset] = 1.0; 562da79fbbcSStefano Zampini offset += 1; 563da79fbbcSStefano Zampini v += nz; 564da79fbbcSStefano Zampini } 5652cbc15d9SMark loTriFactor->csrMat->values->assign(loTriFactor->AA_h, loTriFactor->AA_h+nzLower); 566da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(nzLower*sizeof(PetscScalar));CHKERRQ(ierr); 567da79fbbcSStefano Zampini } 5689ae82921SPaul Mullowney } catch(char *ex) { 56998921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 5709ae82921SPaul Mullowney } 5719ae82921SPaul Mullowney } 5729ae82921SPaul Mullowney PetscFunctionReturn(0); 5739ae82921SPaul Mullowney } 5749ae82921SPaul Mullowney 575087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEBuildILUUpperTriMatrix(Mat A) 5769ae82921SPaul Mullowney { 5779ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 5789ae82921SPaul Mullowney PetscInt n = A->rmap->n; 5799ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 580aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 5819ae82921SPaul Mullowney cusparseStatus_t stat; 5829ae82921SPaul Mullowney const PetscInt *aj = a->j,*adiag = a->diag,*vi; 5839ae82921SPaul Mullowney const MatScalar *aa = a->a,*v; 5849ae82921SPaul Mullowney PetscInt *AiUp, *AjUp; 5859ae82921SPaul Mullowney PetscInt i,nz, nzUpper, offset; 5869ae82921SPaul Mullowney PetscErrorCode ierr; 58757d48284SJunchao Zhang cudaError_t cerr; 5889ae82921SPaul Mullowney 5899ae82921SPaul Mullowney PetscFunctionBegin; 590cf00fe3bSKarl Rupp if (!n) PetscFunctionReturn(0); 591c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 5929ae82921SPaul Mullowney try { 5939ae82921SPaul Mullowney /* next, figure out the number of nonzeros in the upper triangular matrix. */ 5949ae82921SPaul Mullowney nzUpper = adiag[0]-adiag[n]; 595da79fbbcSStefano Zampini if (!upTriFactor) { 5962cbc15d9SMark PetscScalar *AAUp; 5972cbc15d9SMark 5982cbc15d9SMark cerr = cudaMallocHost((void**) &AAUp, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 5992cbc15d9SMark 6009ae82921SPaul Mullowney /* Allocate Space for the upper triangular matrix */ 60157d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AiUp, (n+1)*sizeof(PetscInt));CHKERRCUDA(cerr); 60257d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AjUp, nzUpper*sizeof(PetscInt));CHKERRCUDA(cerr); 6039ae82921SPaul Mullowney 6049ae82921SPaul Mullowney /* Fill the upper triangular matrix */ 6059ae82921SPaul Mullowney AiUp[0]=(PetscInt) 0; 6069ae82921SPaul Mullowney AiUp[n]=nzUpper; 6079ae82921SPaul Mullowney offset = nzUpper; 6089ae82921SPaul Mullowney for (i=n-1; i>=0; i--) { 6099ae82921SPaul Mullowney v = aa + adiag[i+1] + 1; 6109ae82921SPaul Mullowney vi = aj + adiag[i+1] + 1; 6119ae82921SPaul Mullowney 612e057df02SPaul Mullowney /* number of elements NOT on the diagonal */ 6139ae82921SPaul Mullowney nz = adiag[i] - adiag[i+1]-1; 6149ae82921SPaul Mullowney 615e057df02SPaul Mullowney /* decrement the offset */ 6169ae82921SPaul Mullowney offset -= (nz+1); 6179ae82921SPaul Mullowney 618e057df02SPaul Mullowney /* first, set the diagonal elements */ 6199ae82921SPaul Mullowney AjUp[offset] = (PetscInt) i; 62009f51544SAlejandro Lamas Daviña AAUp[offset] = (MatScalar)1./v[nz]; 6219ae82921SPaul Mullowney AiUp[i] = AiUp[i+1] - (nz+1); 6229ae82921SPaul Mullowney 623580bdb30SBarry Smith ierr = PetscArraycpy(&(AjUp[offset+1]), vi, nz);CHKERRQ(ierr); 624580bdb30SBarry Smith ierr = PetscArraycpy(&(AAUp[offset+1]), v, nz);CHKERRQ(ierr); 6259ae82921SPaul Mullowney } 6262205254eSKarl Rupp 627aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 628da79fbbcSStefano Zampini ierr = PetscNew(&upTriFactor);CHKERRQ(ierr); 629da79fbbcSStefano Zampini upTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 6302205254eSKarl Rupp 631aa372e3fSPaul Mullowney /* Create the matrix description */ 63257d48284SJunchao Zhang stat = cusparseCreateMatDescr(&upTriFactor->descr);CHKERRCUSPARSE(stat); 63357d48284SJunchao Zhang stat = cusparseSetMatIndexBase(upTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 6341b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 635afb2bd1cSJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 636afb2bd1cSJunchao Zhang #else 63757d48284SJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 638afb2bd1cSJunchao Zhang #endif 63957d48284SJunchao Zhang stat = cusparseSetMatFillMode(upTriFactor->descr, CUSPARSE_FILL_MODE_UPPER);CHKERRCUSPARSE(stat); 64057d48284SJunchao Zhang stat = cusparseSetMatDiagType(upTriFactor->descr, CUSPARSE_DIAG_TYPE_NON_UNIT);CHKERRCUSPARSE(stat); 641aa372e3fSPaul Mullowney 642aa372e3fSPaul Mullowney /* set the operation */ 643aa372e3fSPaul Mullowney upTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 644aa372e3fSPaul Mullowney 645aa372e3fSPaul Mullowney /* set the matrix */ 646aa372e3fSPaul Mullowney upTriFactor->csrMat = new CsrMatrix; 647aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows = n; 648aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols = n; 649aa372e3fSPaul Mullowney upTriFactor->csrMat->num_entries = nzUpper; 650aa372e3fSPaul Mullowney 651aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(n+1); 652aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->assign(AiUp, AiUp+n+1); 653aa372e3fSPaul Mullowney 654aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(nzUpper); 655aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->assign(AjUp, AjUp+nzUpper); 656aa372e3fSPaul Mullowney 657aa372e3fSPaul Mullowney upTriFactor->csrMat->values = new THRUSTARRAY(nzUpper); 658aa372e3fSPaul Mullowney upTriFactor->csrMat->values->assign(AAUp, AAUp+nzUpper); 659aa372e3fSPaul Mullowney 660afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 661da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 662afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&upTriFactor->solveInfo);CHKERRCUSPARSE(stat); 6631b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 664afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, upTriFactor->solveOp, 665afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 666afb2bd1cSJunchao Zhang upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 667afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo, 668afb2bd1cSJunchao Zhang &upTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 669afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactor->solveBuffer,upTriFactor->solveBufferSize);CHKERRCUDA(cerr); 670afb2bd1cSJunchao Zhang #endif 671afb2bd1cSJunchao Zhang 672aa372e3fSPaul Mullowney /* perform the solve analysis */ 673aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, upTriFactor->solveOp, 674aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 675aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 676d49cd2b7SBarry Smith upTriFactor->csrMat->column_indices->data().get(), 6771b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 678d49cd2b7SBarry Smith upTriFactor->solveInfo, 679d49cd2b7SBarry Smith upTriFactor->solvePolicy, upTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 680d49cd2b7SBarry Smith #else 681d49cd2b7SBarry Smith upTriFactor->solveInfo);CHKERRCUSPARSE(stat); 682afb2bd1cSJunchao Zhang #endif 683da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 684da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 685aa372e3fSPaul Mullowney 686da79fbbcSStefano Zampini /* assign the pointer */ 687aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->upTriFactorPtr = upTriFactor; 6882cbc15d9SMark upTriFactor->AA_h = AAUp; 68957d48284SJunchao Zhang cerr = cudaFreeHost(AiUp);CHKERRCUDA(cerr); 69057d48284SJunchao Zhang cerr = cudaFreeHost(AjUp);CHKERRCUDA(cerr); 6914863603aSSatish Balay ierr = PetscLogCpuToGpu((n+1+nzUpper)*sizeof(int)+nzUpper*sizeof(PetscScalar));CHKERRQ(ierr); 692da79fbbcSStefano Zampini } else { 6932cbc15d9SMark if (!upTriFactor->AA_h) { 6942cbc15d9SMark cerr = cudaMallocHost((void**) &upTriFactor->AA_h, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 6952cbc15d9SMark } 696da79fbbcSStefano Zampini /* Fill the upper triangular matrix */ 697da79fbbcSStefano Zampini offset = nzUpper; 698da79fbbcSStefano Zampini for (i=n-1; i>=0; i--) { 699da79fbbcSStefano Zampini v = aa + adiag[i+1] + 1; 700da79fbbcSStefano Zampini 701da79fbbcSStefano Zampini /* number of elements NOT on the diagonal */ 702da79fbbcSStefano Zampini nz = adiag[i] - adiag[i+1]-1; 703da79fbbcSStefano Zampini 704da79fbbcSStefano Zampini /* decrement the offset */ 705da79fbbcSStefano Zampini offset -= (nz+1); 706da79fbbcSStefano Zampini 707da79fbbcSStefano Zampini /* first, set the diagonal elements */ 7082cbc15d9SMark upTriFactor->AA_h[offset] = 1./v[nz]; 7092cbc15d9SMark ierr = PetscArraycpy(&(upTriFactor->AA_h[offset+1]), v, nz);CHKERRQ(ierr); 710da79fbbcSStefano Zampini } 7112cbc15d9SMark upTriFactor->csrMat->values->assign(upTriFactor->AA_h, upTriFactor->AA_h+nzUpper); 712da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(nzUpper*sizeof(PetscScalar));CHKERRQ(ierr); 713da79fbbcSStefano Zampini } 7149ae82921SPaul Mullowney } catch(char *ex) { 71598921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 7169ae82921SPaul Mullowney } 7179ae82921SPaul Mullowney } 7189ae82921SPaul Mullowney PetscFunctionReturn(0); 7199ae82921SPaul Mullowney } 7209ae82921SPaul Mullowney 721087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(Mat A) 7229ae82921SPaul Mullowney { 7239ae82921SPaul Mullowney PetscErrorCode ierr; 7249ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 7259ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 7269ae82921SPaul Mullowney IS isrow = a->row,iscol = a->icol; 7279ae82921SPaul Mullowney PetscBool row_identity,col_identity; 7289ae82921SPaul Mullowney PetscInt n = A->rmap->n; 7299ae82921SPaul Mullowney 7309ae82921SPaul Mullowney PetscFunctionBegin; 7312c71b3e2SJacob Faibussowitsch PetscCheckFalse(!cusparseTriFactors,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 732087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEBuildILULowerTriMatrix(A);CHKERRQ(ierr); 733087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEBuildILUUpperTriMatrix(A);CHKERRQ(ierr); 7342205254eSKarl Rupp 735da79fbbcSStefano Zampini if (!cusparseTriFactors->workVector) { cusparseTriFactors->workVector = new THRUSTARRAY(n); } 736aa372e3fSPaul Mullowney cusparseTriFactors->nnz=a->nz; 7379ae82921SPaul Mullowney 738c70f7ee4SJunchao Zhang A->offloadmask = PETSC_OFFLOAD_BOTH; 739e057df02SPaul Mullowney /* lower triangular indices */ 7409ae82921SPaul Mullowney ierr = ISIdentity(isrow,&row_identity);CHKERRQ(ierr); 741da79fbbcSStefano Zampini if (!row_identity && !cusparseTriFactors->rpermIndices) { 742da79fbbcSStefano Zampini const PetscInt *r; 743da79fbbcSStefano Zampini 744da79fbbcSStefano Zampini ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 745aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices = new THRUSTINTARRAY(n); 746aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices->assign(r, r+n); 7479ae82921SPaul Mullowney ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 748da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscInt));CHKERRQ(ierr); 749da79fbbcSStefano Zampini } 7509ae82921SPaul Mullowney 751e057df02SPaul Mullowney /* upper triangular indices */ 7529ae82921SPaul Mullowney ierr = ISIdentity(iscol,&col_identity);CHKERRQ(ierr); 753da79fbbcSStefano Zampini if (!col_identity && !cusparseTriFactors->cpermIndices) { 754da79fbbcSStefano Zampini const PetscInt *c; 755da79fbbcSStefano Zampini 756da79fbbcSStefano Zampini ierr = ISGetIndices(iscol,&c);CHKERRQ(ierr); 757aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices = new THRUSTINTARRAY(n); 758aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices->assign(c, c+n); 7599ae82921SPaul Mullowney ierr = ISRestoreIndices(iscol,&c);CHKERRQ(ierr); 760da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscInt));CHKERRQ(ierr); 761da79fbbcSStefano Zampini } 7629ae82921SPaul Mullowney PetscFunctionReturn(0); 7639ae82921SPaul Mullowney } 7649ae82921SPaul Mullowney 765087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEBuildICCTriMatrices(Mat A) 766087f3262SPaul Mullowney { 767087f3262SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 768087f3262SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 769aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 770aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 771087f3262SPaul Mullowney cusparseStatus_t stat; 772087f3262SPaul Mullowney PetscErrorCode ierr; 77357d48284SJunchao Zhang cudaError_t cerr; 774087f3262SPaul Mullowney PetscInt *AiUp, *AjUp; 775087f3262SPaul Mullowney PetscScalar *AAUp; 776087f3262SPaul Mullowney PetscScalar *AALo; 777087f3262SPaul Mullowney PetscInt nzUpper = a->nz,n = A->rmap->n,i,offset,nz,j; 778087f3262SPaul Mullowney Mat_SeqSBAIJ *b = (Mat_SeqSBAIJ*)A->data; 779087f3262SPaul Mullowney const PetscInt *ai = b->i,*aj = b->j,*vj; 780087f3262SPaul Mullowney const MatScalar *aa = b->a,*v; 781087f3262SPaul Mullowney 782087f3262SPaul Mullowney PetscFunctionBegin; 783cf00fe3bSKarl Rupp if (!n) PetscFunctionReturn(0); 784c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 785087f3262SPaul Mullowney try { 786da79fbbcSStefano Zampini cerr = cudaMallocHost((void**) &AAUp, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 787da79fbbcSStefano Zampini cerr = cudaMallocHost((void**) &AALo, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 788da79fbbcSStefano Zampini if (!upTriFactor && !loTriFactor) { 789087f3262SPaul Mullowney /* Allocate Space for the upper triangular matrix */ 79057d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AiUp, (n+1)*sizeof(PetscInt));CHKERRCUDA(cerr); 79157d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AjUp, nzUpper*sizeof(PetscInt));CHKERRCUDA(cerr); 792087f3262SPaul Mullowney 793087f3262SPaul Mullowney /* Fill the upper triangular matrix */ 794087f3262SPaul Mullowney AiUp[0]=(PetscInt) 0; 795087f3262SPaul Mullowney AiUp[n]=nzUpper; 796087f3262SPaul Mullowney offset = 0; 797087f3262SPaul Mullowney for (i=0; i<n; i++) { 798087f3262SPaul Mullowney /* set the pointers */ 799087f3262SPaul Mullowney v = aa + ai[i]; 800087f3262SPaul Mullowney vj = aj + ai[i]; 801087f3262SPaul Mullowney nz = ai[i+1] - ai[i] - 1; /* exclude diag[i] */ 802087f3262SPaul Mullowney 803087f3262SPaul Mullowney /* first, set the diagonal elements */ 804087f3262SPaul Mullowney AjUp[offset] = (PetscInt) i; 80509f51544SAlejandro Lamas Daviña AAUp[offset] = (MatScalar)1.0/v[nz]; 806087f3262SPaul Mullowney AiUp[i] = offset; 80709f51544SAlejandro Lamas Daviña AALo[offset] = (MatScalar)1.0/v[nz]; 808087f3262SPaul Mullowney 809087f3262SPaul Mullowney offset+=1; 810087f3262SPaul Mullowney if (nz>0) { 811f22e0265SBarry Smith ierr = PetscArraycpy(&(AjUp[offset]), vj, nz);CHKERRQ(ierr); 812580bdb30SBarry Smith ierr = PetscArraycpy(&(AAUp[offset]), v, nz);CHKERRQ(ierr); 813087f3262SPaul Mullowney for (j=offset; j<offset+nz; j++) { 814087f3262SPaul Mullowney AAUp[j] = -AAUp[j]; 815087f3262SPaul Mullowney AALo[j] = AAUp[j]/v[nz]; 816087f3262SPaul Mullowney } 817087f3262SPaul Mullowney offset+=nz; 818087f3262SPaul Mullowney } 819087f3262SPaul Mullowney } 820087f3262SPaul Mullowney 821aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 822da79fbbcSStefano Zampini ierr = PetscNew(&upTriFactor);CHKERRQ(ierr); 823da79fbbcSStefano Zampini upTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 824087f3262SPaul Mullowney 825aa372e3fSPaul Mullowney /* Create the matrix description */ 82657d48284SJunchao Zhang stat = cusparseCreateMatDescr(&upTriFactor->descr);CHKERRCUSPARSE(stat); 82757d48284SJunchao Zhang stat = cusparseSetMatIndexBase(upTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 8281b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 829afb2bd1cSJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 830afb2bd1cSJunchao Zhang #else 83157d48284SJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 832afb2bd1cSJunchao Zhang #endif 83357d48284SJunchao Zhang stat = cusparseSetMatFillMode(upTriFactor->descr, CUSPARSE_FILL_MODE_UPPER);CHKERRCUSPARSE(stat); 83457d48284SJunchao Zhang stat = cusparseSetMatDiagType(upTriFactor->descr, CUSPARSE_DIAG_TYPE_UNIT);CHKERRCUSPARSE(stat); 835087f3262SPaul Mullowney 836aa372e3fSPaul Mullowney /* set the matrix */ 837aa372e3fSPaul Mullowney upTriFactor->csrMat = new CsrMatrix; 838aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows = A->rmap->n; 839aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols = A->cmap->n; 840aa372e3fSPaul Mullowney upTriFactor->csrMat->num_entries = a->nz; 841aa372e3fSPaul Mullowney 842aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 843aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->assign(AiUp, AiUp+A->rmap->n+1); 844aa372e3fSPaul Mullowney 845aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(a->nz); 846aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->assign(AjUp, AjUp+a->nz); 847aa372e3fSPaul Mullowney 848aa372e3fSPaul Mullowney upTriFactor->csrMat->values = new THRUSTARRAY(a->nz); 849aa372e3fSPaul Mullowney upTriFactor->csrMat->values->assign(AAUp, AAUp+a->nz); 850aa372e3fSPaul Mullowney 851afb2bd1cSJunchao Zhang /* set the operation */ 852afb2bd1cSJunchao Zhang upTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 853afb2bd1cSJunchao Zhang 854afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 855da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 856afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&upTriFactor->solveInfo);CHKERRCUSPARSE(stat); 8571b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 858afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, upTriFactor->solveOp, 859afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 860afb2bd1cSJunchao Zhang upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 861afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo, 862afb2bd1cSJunchao Zhang &upTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 863afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactor->solveBuffer,upTriFactor->solveBufferSize);CHKERRCUDA(cerr); 864afb2bd1cSJunchao Zhang #endif 865afb2bd1cSJunchao Zhang 866aa372e3fSPaul Mullowney /* perform the solve analysis */ 867aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, upTriFactor->solveOp, 868aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 869aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 870d49cd2b7SBarry Smith upTriFactor->csrMat->column_indices->data().get(), 8711b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 872d49cd2b7SBarry Smith upTriFactor->solveInfo, 873d49cd2b7SBarry Smith upTriFactor->solvePolicy, upTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 874d49cd2b7SBarry Smith #else 875d49cd2b7SBarry Smith upTriFactor->solveInfo);CHKERRCUSPARSE(stat); 876afb2bd1cSJunchao Zhang #endif 877da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 878da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 879aa372e3fSPaul Mullowney 880da79fbbcSStefano Zampini /* assign the pointer */ 881aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->upTriFactorPtr = upTriFactor; 882aa372e3fSPaul Mullowney 883aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 884da79fbbcSStefano Zampini ierr = PetscNew(&loTriFactor);CHKERRQ(ierr); 885da79fbbcSStefano Zampini loTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 886aa372e3fSPaul Mullowney 887aa372e3fSPaul Mullowney /* Create the matrix description */ 88857d48284SJunchao Zhang stat = cusparseCreateMatDescr(&loTriFactor->descr);CHKERRCUSPARSE(stat); 88957d48284SJunchao Zhang stat = cusparseSetMatIndexBase(loTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 8901b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 891afb2bd1cSJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 892afb2bd1cSJunchao Zhang #else 89357d48284SJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 894afb2bd1cSJunchao Zhang #endif 89557d48284SJunchao Zhang stat = cusparseSetMatFillMode(loTriFactor->descr, CUSPARSE_FILL_MODE_UPPER);CHKERRCUSPARSE(stat); 89657d48284SJunchao Zhang stat = cusparseSetMatDiagType(loTriFactor->descr, CUSPARSE_DIAG_TYPE_NON_UNIT);CHKERRCUSPARSE(stat); 897aa372e3fSPaul Mullowney 898aa372e3fSPaul Mullowney /* set the operation */ 899aa372e3fSPaul Mullowney loTriFactor->solveOp = CUSPARSE_OPERATION_TRANSPOSE; 900aa372e3fSPaul Mullowney 901aa372e3fSPaul Mullowney /* set the matrix */ 902aa372e3fSPaul Mullowney loTriFactor->csrMat = new CsrMatrix; 903aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows = A->rmap->n; 904aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols = A->cmap->n; 905aa372e3fSPaul Mullowney loTriFactor->csrMat->num_entries = a->nz; 906aa372e3fSPaul Mullowney 907aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 908aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->assign(AiUp, AiUp+A->rmap->n+1); 909aa372e3fSPaul Mullowney 910aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(a->nz); 911aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->assign(AjUp, AjUp+a->nz); 912aa372e3fSPaul Mullowney 913aa372e3fSPaul Mullowney loTriFactor->csrMat->values = new THRUSTARRAY(a->nz); 914aa372e3fSPaul Mullowney loTriFactor->csrMat->values->assign(AALo, AALo+a->nz); 915aa372e3fSPaul Mullowney 916afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 917da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 918afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&loTriFactor->solveInfo);CHKERRCUSPARSE(stat); 9191b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 920afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, loTriFactor->solveOp, 921afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 922afb2bd1cSJunchao Zhang loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 923afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo, 924afb2bd1cSJunchao Zhang &loTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 925afb2bd1cSJunchao Zhang cerr = cudaMalloc(&loTriFactor->solveBuffer,loTriFactor->solveBufferSize);CHKERRCUDA(cerr); 926afb2bd1cSJunchao Zhang #endif 927afb2bd1cSJunchao Zhang 928aa372e3fSPaul Mullowney /* perform the solve analysis */ 929aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, loTriFactor->solveOp, 930aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 931aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 932d49cd2b7SBarry Smith loTriFactor->csrMat->column_indices->data().get(), 9331b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 934d49cd2b7SBarry Smith loTriFactor->solveInfo, 935d49cd2b7SBarry Smith loTriFactor->solvePolicy, loTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 936d49cd2b7SBarry Smith #else 937d49cd2b7SBarry Smith loTriFactor->solveInfo);CHKERRCUSPARSE(stat); 938afb2bd1cSJunchao Zhang #endif 939da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 940da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 941aa372e3fSPaul Mullowney 942da79fbbcSStefano Zampini /* assign the pointer */ 943aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->loTriFactorPtr = loTriFactor; 944087f3262SPaul Mullowney 945da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(2*(((A->rmap->n+1)+(a->nz))*sizeof(int)+(a->nz)*sizeof(PetscScalar)));CHKERRQ(ierr); 94657d48284SJunchao Zhang cerr = cudaFreeHost(AiUp);CHKERRCUDA(cerr); 94757d48284SJunchao Zhang cerr = cudaFreeHost(AjUp);CHKERRCUDA(cerr); 948da79fbbcSStefano Zampini } else { 949da79fbbcSStefano Zampini /* Fill the upper triangular matrix */ 950da79fbbcSStefano Zampini offset = 0; 951da79fbbcSStefano Zampini for (i=0; i<n; i++) { 952da79fbbcSStefano Zampini /* set the pointers */ 953da79fbbcSStefano Zampini v = aa + ai[i]; 954da79fbbcSStefano Zampini nz = ai[i+1] - ai[i] - 1; /* exclude diag[i] */ 955da79fbbcSStefano Zampini 956da79fbbcSStefano Zampini /* first, set the diagonal elements */ 957da79fbbcSStefano Zampini AAUp[offset] = 1.0/v[nz]; 958da79fbbcSStefano Zampini AALo[offset] = 1.0/v[nz]; 959da79fbbcSStefano Zampini 960da79fbbcSStefano Zampini offset+=1; 961da79fbbcSStefano Zampini if (nz>0) { 962da79fbbcSStefano Zampini ierr = PetscArraycpy(&(AAUp[offset]), v, nz);CHKERRQ(ierr); 963da79fbbcSStefano Zampini for (j=offset; j<offset+nz; j++) { 964da79fbbcSStefano Zampini AAUp[j] = -AAUp[j]; 965da79fbbcSStefano Zampini AALo[j] = AAUp[j]/v[nz]; 966da79fbbcSStefano Zampini } 967da79fbbcSStefano Zampini offset+=nz; 968da79fbbcSStefano Zampini } 969da79fbbcSStefano Zampini } 9702c71b3e2SJacob Faibussowitsch PetscCheckFalse(!upTriFactor,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 9712c71b3e2SJacob Faibussowitsch PetscCheckFalse(!loTriFactor,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 972da79fbbcSStefano Zampini upTriFactor->csrMat->values->assign(AAUp, AAUp+a->nz); 973da79fbbcSStefano Zampini loTriFactor->csrMat->values->assign(AALo, AALo+a->nz); 974da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(2*(a->nz)*sizeof(PetscScalar));CHKERRQ(ierr); 975da79fbbcSStefano Zampini } 97657d48284SJunchao Zhang cerr = cudaFreeHost(AAUp);CHKERRCUDA(cerr); 97757d48284SJunchao Zhang cerr = cudaFreeHost(AALo);CHKERRCUDA(cerr); 978087f3262SPaul Mullowney } catch(char *ex) { 97998921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 980087f3262SPaul Mullowney } 981087f3262SPaul Mullowney } 982087f3262SPaul Mullowney PetscFunctionReturn(0); 983087f3262SPaul Mullowney } 984087f3262SPaul Mullowney 985087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEICCAnalysisAndCopyToGPU(Mat A) 9869ae82921SPaul Mullowney { 9879ae82921SPaul Mullowney PetscErrorCode ierr; 988087f3262SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 989087f3262SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 990087f3262SPaul Mullowney IS ip = a->row; 991087f3262SPaul Mullowney PetscBool perm_identity; 992087f3262SPaul Mullowney PetscInt n = A->rmap->n; 993087f3262SPaul Mullowney 994087f3262SPaul Mullowney PetscFunctionBegin; 9952c71b3e2SJacob Faibussowitsch PetscCheckFalse(!cusparseTriFactors,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 996087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEBuildICCTriMatrices(A);CHKERRQ(ierr); 997da79fbbcSStefano Zampini if (!cusparseTriFactors->workVector) { cusparseTriFactors->workVector = new THRUSTARRAY(n); } 998aa372e3fSPaul Mullowney cusparseTriFactors->nnz=(a->nz-n)*2 + n; 999aa372e3fSPaul Mullowney 1000da79fbbcSStefano Zampini A->offloadmask = PETSC_OFFLOAD_BOTH; 1001da79fbbcSStefano Zampini 1002087f3262SPaul Mullowney /* lower triangular indices */ 1003087f3262SPaul Mullowney ierr = ISIdentity(ip,&perm_identity);CHKERRQ(ierr); 1004087f3262SPaul Mullowney if (!perm_identity) { 10054e4bbfaaSStefano Zampini IS iip; 1006da79fbbcSStefano Zampini const PetscInt *irip,*rip; 10074e4bbfaaSStefano Zampini 10084e4bbfaaSStefano Zampini ierr = ISInvertPermutation(ip,PETSC_DECIDE,&iip);CHKERRQ(ierr); 10094e4bbfaaSStefano Zampini ierr = ISGetIndices(iip,&irip);CHKERRQ(ierr); 1010da79fbbcSStefano Zampini ierr = ISGetIndices(ip,&rip);CHKERRQ(ierr); 1011aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices = new THRUSTINTARRAY(n); 1012aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices->assign(rip, rip+n); 1013aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices = new THRUSTINTARRAY(n); 10144e4bbfaaSStefano Zampini cusparseTriFactors->cpermIndices->assign(irip, irip+n); 10154e4bbfaaSStefano Zampini ierr = ISRestoreIndices(iip,&irip);CHKERRQ(ierr); 10164e4bbfaaSStefano Zampini ierr = ISDestroy(&iip);CHKERRQ(ierr); 1017087f3262SPaul Mullowney ierr = ISRestoreIndices(ip,&rip);CHKERRQ(ierr); 1018da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(2.*n*sizeof(PetscInt));CHKERRQ(ierr); 1019da79fbbcSStefano Zampini } 1020087f3262SPaul Mullowney PetscFunctionReturn(0); 1021087f3262SPaul Mullowney } 1022087f3262SPaul Mullowney 1023087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorNumeric_SeqAIJCUSPARSE(Mat B,Mat A,const MatFactorInfo *info) 1024087f3262SPaul Mullowney { 1025087f3262SPaul Mullowney Mat_SeqAIJ *b = (Mat_SeqAIJ*)B->data; 1026087f3262SPaul Mullowney IS ip = b->row; 1027087f3262SPaul Mullowney PetscBool perm_identity; 1028b175d8bbSPaul Mullowney PetscErrorCode ierr; 1029087f3262SPaul Mullowney 1030087f3262SPaul Mullowney PetscFunctionBegin; 103157181aedSStefano Zampini ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 1032087f3262SPaul Mullowney ierr = MatCholeskyFactorNumeric_SeqAIJ(B,A,info);CHKERRQ(ierr); 1033ccdfe979SStefano Zampini B->offloadmask = PETSC_OFFLOAD_CPU; 1034087f3262SPaul Mullowney /* determine which version of MatSolve needs to be used. */ 1035087f3262SPaul Mullowney ierr = ISIdentity(ip,&perm_identity);CHKERRQ(ierr); 1036087f3262SPaul Mullowney if (perm_identity) { 1037087f3262SPaul Mullowney B->ops->solve = MatSolve_SeqAIJCUSPARSE_NaturalOrdering; 1038087f3262SPaul Mullowney B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering; 10394e4bbfaaSStefano Zampini B->ops->matsolve = NULL; 10404e4bbfaaSStefano Zampini B->ops->matsolvetranspose = NULL; 1041087f3262SPaul Mullowney } else { 1042087f3262SPaul Mullowney B->ops->solve = MatSolve_SeqAIJCUSPARSE; 1043087f3262SPaul Mullowney B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE; 10444e4bbfaaSStefano Zampini B->ops->matsolve = NULL; 10454e4bbfaaSStefano Zampini B->ops->matsolvetranspose = NULL; 1046087f3262SPaul Mullowney } 1047087f3262SPaul Mullowney 1048087f3262SPaul Mullowney /* get the triangular factors */ 1049087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEICCAnalysisAndCopyToGPU(B);CHKERRQ(ierr); 1050087f3262SPaul Mullowney PetscFunctionReturn(0); 1051087f3262SPaul Mullowney } 10529ae82921SPaul Mullowney 1053b175d8bbSPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(Mat A) 1054bda325fcSPaul Mullowney { 1055bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1056aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 1057aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 1058da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT; 1059da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT; 1060bda325fcSPaul Mullowney cusparseStatus_t stat; 1061aa372e3fSPaul Mullowney cusparseIndexBase_t indexBase; 1062aa372e3fSPaul Mullowney cusparseMatrixType_t matrixType; 1063aa372e3fSPaul Mullowney cusparseFillMode_t fillMode; 1064aa372e3fSPaul Mullowney cusparseDiagType_t diagType; 10651b0a6780SStefano Zampini cudaError_t cerr; 1066da79fbbcSStefano Zampini PetscErrorCode ierr; 1067b175d8bbSPaul Mullowney 1068bda325fcSPaul Mullowney PetscFunctionBegin; 1069aa372e3fSPaul Mullowney /* allocate space for the transpose of the lower triangular factor */ 1070da79fbbcSStefano Zampini ierr = PetscNew(&loTriFactorT);CHKERRQ(ierr); 1071da79fbbcSStefano Zampini loTriFactorT->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 1072aa372e3fSPaul Mullowney 1073aa372e3fSPaul Mullowney /* set the matrix descriptors of the lower triangular factor */ 1074aa372e3fSPaul Mullowney matrixType = cusparseGetMatType(loTriFactor->descr); 1075aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(loTriFactor->descr); 1076aa372e3fSPaul Mullowney fillMode = cusparseGetMatFillMode(loTriFactor->descr)==CUSPARSE_FILL_MODE_UPPER ? 1077aa372e3fSPaul Mullowney CUSPARSE_FILL_MODE_LOWER : CUSPARSE_FILL_MODE_UPPER; 1078aa372e3fSPaul Mullowney diagType = cusparseGetMatDiagType(loTriFactor->descr); 1079aa372e3fSPaul Mullowney 1080aa372e3fSPaul Mullowney /* Create the matrix description */ 108157d48284SJunchao Zhang stat = cusparseCreateMatDescr(&loTriFactorT->descr);CHKERRCUSPARSE(stat); 108257d48284SJunchao Zhang stat = cusparseSetMatIndexBase(loTriFactorT->descr, indexBase);CHKERRCUSPARSE(stat); 108357d48284SJunchao Zhang stat = cusparseSetMatType(loTriFactorT->descr, matrixType);CHKERRCUSPARSE(stat); 108457d48284SJunchao Zhang stat = cusparseSetMatFillMode(loTriFactorT->descr, fillMode);CHKERRCUSPARSE(stat); 108557d48284SJunchao Zhang stat = cusparseSetMatDiagType(loTriFactorT->descr, diagType);CHKERRCUSPARSE(stat); 1086aa372e3fSPaul Mullowney 1087aa372e3fSPaul Mullowney /* set the operation */ 1088aa372e3fSPaul Mullowney loTriFactorT->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 1089aa372e3fSPaul Mullowney 1090aa372e3fSPaul Mullowney /* allocate GPU space for the CSC of the lower triangular factor*/ 1091aa372e3fSPaul Mullowney loTriFactorT->csrMat = new CsrMatrix; 1092afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows = loTriFactor->csrMat->num_cols; 1093afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_cols = loTriFactor->csrMat->num_rows; 1094aa372e3fSPaul Mullowney loTriFactorT->csrMat->num_entries = loTriFactor->csrMat->num_entries; 1095afb2bd1cSJunchao Zhang loTriFactorT->csrMat->row_offsets = new THRUSTINTARRAY32(loTriFactorT->csrMat->num_rows+1); 1096afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices = new THRUSTINTARRAY32(loTriFactorT->csrMat->num_entries); 1097afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values = new THRUSTARRAY(loTriFactorT->csrMat->num_entries); 1098aa372e3fSPaul Mullowney 1099aa372e3fSPaul Mullowney /* compute the transpose of the lower triangular factor, i.e. the CSC */ 1100afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1101afb2bd1cSJunchao Zhang stat = cusparseCsr2cscEx2_bufferSize(cusparseTriFactors->handle, loTriFactor->csrMat->num_rows, 1102afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_cols, loTriFactor->csrMat->num_entries, 1103afb2bd1cSJunchao Zhang loTriFactor->csrMat->values->data().get(), 1104afb2bd1cSJunchao Zhang loTriFactor->csrMat->row_offsets->data().get(), 1105afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), 1106afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values->data().get(), 1107afb2bd1cSJunchao Zhang loTriFactorT->csrMat->row_offsets->data().get(), loTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1108afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC,indexBase, 1109afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG1, &loTriFactor->csr2cscBufferSize);CHKERRCUSPARSE(stat); 11101b0a6780SStefano Zampini cerr = cudaMalloc(&loTriFactor->csr2cscBuffer,loTriFactor->csr2cscBufferSize);CHKERRCUDA(cerr); 1111afb2bd1cSJunchao Zhang #endif 1112afb2bd1cSJunchao Zhang 1113da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1114aa372e3fSPaul Mullowney stat = cusparse_csr2csc(cusparseTriFactors->handle, loTriFactor->csrMat->num_rows, 1115aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols, loTriFactor->csrMat->num_entries, 1116aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), 1117aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->data().get(), 1118aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->data().get(), 1119aa372e3fSPaul Mullowney loTriFactorT->csrMat->values->data().get(), 1120afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1121afb2bd1cSJunchao Zhang loTriFactorT->csrMat->row_offsets->data().get(), loTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1122afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase, 1123d49cd2b7SBarry Smith CUSPARSE_CSR2CSC_ALG1, loTriFactor->csr2cscBuffer);CHKERRCUSPARSE(stat); 1124afb2bd1cSJunchao Zhang #else 1125afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), 1126d49cd2b7SBarry Smith CUSPARSE_ACTION_NUMERIC, indexBase);CHKERRCUSPARSE(stat); 1127afb2bd1cSJunchao Zhang #endif 1128da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1129da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1130aa372e3fSPaul Mullowney 1131afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 1132da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1133afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&loTriFactorT->solveInfo);CHKERRCUSPARSE(stat); 11341b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1135afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, loTriFactorT->solveOp, 1136afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, loTriFactorT->csrMat->num_entries, loTriFactorT->descr, 1137afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), 1138afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices->data().get(), loTriFactorT->solveInfo, 1139afb2bd1cSJunchao Zhang &loTriFactorT->solveBufferSize);CHKERRCUSPARSE(stat); 1140afb2bd1cSJunchao Zhang cerr = cudaMalloc(&loTriFactorT->solveBuffer,loTriFactorT->solveBufferSize);CHKERRCUDA(cerr); 1141afb2bd1cSJunchao Zhang #endif 1142afb2bd1cSJunchao Zhang 1143afb2bd1cSJunchao Zhang /* perform the solve analysis */ 1144aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, loTriFactorT->solveOp, 1145afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, loTriFactorT->csrMat->num_entries, loTriFactorT->descr, 1146afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), 1147d49cd2b7SBarry Smith loTriFactorT->csrMat->column_indices->data().get(), 11481b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1149d49cd2b7SBarry Smith loTriFactorT->solveInfo, 1150d49cd2b7SBarry Smith loTriFactorT->solvePolicy, loTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1151d49cd2b7SBarry Smith #else 1152d49cd2b7SBarry Smith loTriFactorT->solveInfo);CHKERRCUSPARSE(stat); 1153afb2bd1cSJunchao Zhang #endif 1154da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1155da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1156aa372e3fSPaul Mullowney 1157da79fbbcSStefano Zampini /* assign the pointer */ 1158aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->loTriFactorPtrTranspose = loTriFactorT; 1159aa372e3fSPaul Mullowney 1160aa372e3fSPaul Mullowney /*********************************************/ 1161aa372e3fSPaul Mullowney /* Now the Transpose of the Upper Tri Factor */ 1162aa372e3fSPaul Mullowney /*********************************************/ 1163aa372e3fSPaul Mullowney 1164aa372e3fSPaul Mullowney /* allocate space for the transpose of the upper triangular factor */ 1165da79fbbcSStefano Zampini ierr = PetscNew(&upTriFactorT);CHKERRQ(ierr); 1166da79fbbcSStefano Zampini upTriFactorT->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 1167aa372e3fSPaul Mullowney 1168aa372e3fSPaul Mullowney /* set the matrix descriptors of the upper triangular factor */ 1169aa372e3fSPaul Mullowney matrixType = cusparseGetMatType(upTriFactor->descr); 1170aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(upTriFactor->descr); 1171aa372e3fSPaul Mullowney fillMode = cusparseGetMatFillMode(upTriFactor->descr)==CUSPARSE_FILL_MODE_UPPER ? 1172aa372e3fSPaul Mullowney CUSPARSE_FILL_MODE_LOWER : CUSPARSE_FILL_MODE_UPPER; 1173aa372e3fSPaul Mullowney diagType = cusparseGetMatDiagType(upTriFactor->descr); 1174aa372e3fSPaul Mullowney 1175aa372e3fSPaul Mullowney /* Create the matrix description */ 117657d48284SJunchao Zhang stat = cusparseCreateMatDescr(&upTriFactorT->descr);CHKERRCUSPARSE(stat); 117757d48284SJunchao Zhang stat = cusparseSetMatIndexBase(upTriFactorT->descr, indexBase);CHKERRCUSPARSE(stat); 117857d48284SJunchao Zhang stat = cusparseSetMatType(upTriFactorT->descr, matrixType);CHKERRCUSPARSE(stat); 117957d48284SJunchao Zhang stat = cusparseSetMatFillMode(upTriFactorT->descr, fillMode);CHKERRCUSPARSE(stat); 118057d48284SJunchao Zhang stat = cusparseSetMatDiagType(upTriFactorT->descr, diagType);CHKERRCUSPARSE(stat); 1181aa372e3fSPaul Mullowney 1182aa372e3fSPaul Mullowney /* set the operation */ 1183aa372e3fSPaul Mullowney upTriFactorT->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 1184aa372e3fSPaul Mullowney 1185aa372e3fSPaul Mullowney /* allocate GPU space for the CSC of the upper triangular factor*/ 1186aa372e3fSPaul Mullowney upTriFactorT->csrMat = new CsrMatrix; 1187afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows = upTriFactor->csrMat->num_cols; 1188afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_cols = upTriFactor->csrMat->num_rows; 1189aa372e3fSPaul Mullowney upTriFactorT->csrMat->num_entries = upTriFactor->csrMat->num_entries; 1190afb2bd1cSJunchao Zhang upTriFactorT->csrMat->row_offsets = new THRUSTINTARRAY32(upTriFactorT->csrMat->num_rows+1); 1191afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices = new THRUSTINTARRAY32(upTriFactorT->csrMat->num_entries); 1192afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values = new THRUSTARRAY(upTriFactorT->csrMat->num_entries); 1193aa372e3fSPaul Mullowney 1194aa372e3fSPaul Mullowney /* compute the transpose of the upper triangular factor, i.e. the CSC */ 1195afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1196afb2bd1cSJunchao Zhang stat = cusparseCsr2cscEx2_bufferSize(cusparseTriFactors->handle,upTriFactor->csrMat->num_rows, 1197afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_cols, upTriFactor->csrMat->num_entries, 1198afb2bd1cSJunchao Zhang upTriFactor->csrMat->values->data().get(), 1199afb2bd1cSJunchao Zhang upTriFactor->csrMat->row_offsets->data().get(), 1200afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), 1201afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values->data().get(), 1202afb2bd1cSJunchao Zhang upTriFactorT->csrMat->row_offsets->data().get(), upTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1203afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC,indexBase, 1204afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG1, &upTriFactor->csr2cscBufferSize);CHKERRCUSPARSE(stat); 1205afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactor->csr2cscBuffer,upTriFactor->csr2cscBufferSize);CHKERRCUDA(cerr); 1206afb2bd1cSJunchao Zhang #endif 1207afb2bd1cSJunchao Zhang 1208da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1209aa372e3fSPaul Mullowney stat = cusparse_csr2csc(cusparseTriFactors->handle, upTriFactor->csrMat->num_rows, 1210aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols, upTriFactor->csrMat->num_entries, 1211aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), 1212aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->data().get(), 1213aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->data().get(), 1214aa372e3fSPaul Mullowney upTriFactorT->csrMat->values->data().get(), 1215afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1216afb2bd1cSJunchao Zhang upTriFactorT->csrMat->row_offsets->data().get(), upTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1217afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase, 1218d49cd2b7SBarry Smith CUSPARSE_CSR2CSC_ALG1, upTriFactor->csr2cscBuffer);CHKERRCUSPARSE(stat); 1219afb2bd1cSJunchao Zhang #else 1220afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), 1221d49cd2b7SBarry Smith CUSPARSE_ACTION_NUMERIC, indexBase);CHKERRCUSPARSE(stat); 1222afb2bd1cSJunchao Zhang #endif 1223d49cd2b7SBarry Smith 1224da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1225da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1226aa372e3fSPaul Mullowney 1227afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 1228da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1229afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&upTriFactorT->solveInfo);CHKERRCUSPARSE(stat); 12301b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1231afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, upTriFactorT->solveOp, 1232afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, upTriFactorT->csrMat->num_entries, upTriFactorT->descr, 1233afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), 1234afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices->data().get(), upTriFactorT->solveInfo, 1235afb2bd1cSJunchao Zhang &upTriFactorT->solveBufferSize);CHKERRCUSPARSE(stat); 1236afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactorT->solveBuffer,upTriFactorT->solveBufferSize);CHKERRCUDA(cerr); 1237afb2bd1cSJunchao Zhang #endif 1238afb2bd1cSJunchao Zhang 1239afb2bd1cSJunchao Zhang /* perform the solve analysis */ 1240aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, upTriFactorT->solveOp, 1241afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, upTriFactorT->csrMat->num_entries, upTriFactorT->descr, 1242afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), 1243d49cd2b7SBarry Smith upTriFactorT->csrMat->column_indices->data().get(), 12441b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1245d49cd2b7SBarry Smith upTriFactorT->solveInfo, 1246d49cd2b7SBarry Smith upTriFactorT->solvePolicy, upTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1247d49cd2b7SBarry Smith #else 1248d49cd2b7SBarry Smith upTriFactorT->solveInfo);CHKERRCUSPARSE(stat); 1249afb2bd1cSJunchao Zhang #endif 1250d49cd2b7SBarry Smith 1251da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1252da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1253aa372e3fSPaul Mullowney 1254da79fbbcSStefano Zampini /* assign the pointer */ 1255aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->upTriFactorPtrTranspose = upTriFactorT; 1256bda325fcSPaul Mullowney PetscFunctionReturn(0); 1257bda325fcSPaul Mullowney } 1258bda325fcSPaul Mullowney 1259a49f1ed0SStefano Zampini struct PetscScalarToPetscInt 1260a49f1ed0SStefano Zampini { 1261a49f1ed0SStefano Zampini __host__ __device__ 1262a49f1ed0SStefano Zampini PetscInt operator()(PetscScalar s) 1263a49f1ed0SStefano Zampini { 1264a49f1ed0SStefano Zampini return (PetscInt)PetscRealPart(s); 1265a49f1ed0SStefano Zampini } 1266a49f1ed0SStefano Zampini }; 1267a49f1ed0SStefano Zampini 12683606e59fSJunchao Zhang static PetscErrorCode MatSeqAIJCUSPARSEFormExplicitTranspose(Mat A) 1269bda325fcSPaul Mullowney { 1270aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 1271a49f1ed0SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *matstruct, *matstructT; 1272bda325fcSPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 1273bda325fcSPaul Mullowney cusparseStatus_t stat; 1274aa372e3fSPaul Mullowney cusparseIndexBase_t indexBase; 1275b06137fdSPaul Mullowney cudaError_t err; 127685ba7357SStefano Zampini PetscErrorCode ierr; 1277b175d8bbSPaul Mullowney 1278bda325fcSPaul Mullowney PetscFunctionBegin; 1279a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 1280a49f1ed0SStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->mat; 12812c71b3e2SJacob Faibussowitsch PetscCheckFalse(!matstruct,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing mat struct"); 1282a49f1ed0SStefano Zampini matstructT = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->matTranspose; 12832c71b3e2SJacob Faibussowitsch PetscCheckFalse(A->transupdated && !matstructT,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing matTranspose struct"); 12841a2c6b5cSJunchao Zhang if (A->transupdated) PetscFunctionReturn(0); 128585ba7357SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1286ee7b52eaSHong Zhang ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1287a49f1ed0SStefano Zampini if (cusparsestruct->format != MAT_CUSPARSE_CSR) { 1288a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr); 1289a49f1ed0SStefano Zampini } 1290a49f1ed0SStefano Zampini if (!cusparsestruct->matTranspose) { /* create cusparse matrix */ 1291aa372e3fSPaul Mullowney matstructT = new Mat_SeqAIJCUSPARSEMultStruct; 129257d48284SJunchao Zhang stat = cusparseCreateMatDescr(&matstructT->descr);CHKERRCUSPARSE(stat); 1293aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(matstruct->descr); 129457d48284SJunchao Zhang stat = cusparseSetMatIndexBase(matstructT->descr, indexBase);CHKERRCUSPARSE(stat); 129557d48284SJunchao Zhang stat = cusparseSetMatType(matstructT->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 1296aa372e3fSPaul Mullowney 1297b06137fdSPaul Mullowney /* set alpha and beta */ 1298afb2bd1cSJunchao Zhang err = cudaMalloc((void **)&(matstructT->alpha_one),sizeof(PetscScalar));CHKERRCUDA(err); 12997656d835SStefano Zampini err = cudaMalloc((void **)&(matstructT->beta_zero),sizeof(PetscScalar));CHKERRCUDA(err); 13007656d835SStefano Zampini err = cudaMalloc((void **)&(matstructT->beta_one), sizeof(PetscScalar));CHKERRCUDA(err); 1301afb2bd1cSJunchao Zhang err = cudaMemcpy(matstructT->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 13027656d835SStefano Zampini err = cudaMemcpy(matstructT->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 13037656d835SStefano Zampini err = cudaMemcpy(matstructT->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 1304b06137fdSPaul Mullowney 1305aa372e3fSPaul Mullowney if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 1306aa372e3fSPaul Mullowney CsrMatrix *matrixT = new CsrMatrix; 1307a49f1ed0SStefano Zampini matstructT->mat = matrixT; 1308554b8892SKarl Rupp matrixT->num_rows = A->cmap->n; 1309554b8892SKarl Rupp matrixT->num_cols = A->rmap->n; 1310aa372e3fSPaul Mullowney matrixT->num_entries = a->nz; 1311a8bd5306SMark Adams matrixT->row_offsets = new THRUSTINTARRAY32(matrixT->num_rows+1); 1312aa372e3fSPaul Mullowney matrixT->column_indices = new THRUSTINTARRAY32(a->nz); 1313aa372e3fSPaul Mullowney matrixT->values = new THRUSTARRAY(a->nz); 1314a3fdcf43SKarl Rupp 1315039c6fbaSStefano Zampini if (!cusparsestruct->rowoffsets_gpu) { cusparsestruct->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n+1); } 131681902715SJunchao Zhang cusparsestruct->rowoffsets_gpu->assign(a->i,a->i+A->rmap->n+1); 1317afb2bd1cSJunchao Zhang 1318afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 13193606e59fSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,2,1) 1320afb2bd1cSJunchao Zhang stat = cusparseCreateCsr(&matstructT->matDescr, 1321afb2bd1cSJunchao Zhang matrixT->num_rows, matrixT->num_cols, matrixT->num_entries, 1322afb2bd1cSJunchao Zhang matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), 1323afb2bd1cSJunchao Zhang matrixT->values->data().get(), 1324afb2bd1cSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, /* row offset, col idx type due to THRUSTINTARRAY32 */ 1325afb2bd1cSJunchao Zhang indexBase,cusparse_scalartype);CHKERRCUSPARSE(stat); 13263606e59fSJunchao Zhang #else 13273606e59fSJunchao Zhang /* cusparse-11.x returns errors with zero-sized matrices until 11.2.1, 13283606e59fSJunchao Zhang see https://docs.nvidia.com/cuda/cuda-toolkit-release-notes/index.html#cusparse-11.2.1 13293606e59fSJunchao Zhang 13303606e59fSJunchao Zhang I don't know what a proper value should be for matstructT->matDescr with empty matrices, so I just set 13313606e59fSJunchao Zhang it to NULL to blow it up if one relies on it. Per https://docs.nvidia.com/cuda/cusparse/index.html#csr2cscEx2, 13323606e59fSJunchao Zhang when nnz = 0, matrixT->row_offsets[] should be filled with indexBase. So I also set it accordingly. 13333606e59fSJunchao Zhang */ 13343606e59fSJunchao Zhang if (matrixT->num_entries) { 13353606e59fSJunchao Zhang stat = cusparseCreateCsr(&matstructT->matDescr, 13363606e59fSJunchao Zhang matrixT->num_rows, matrixT->num_cols, matrixT->num_entries, 13373606e59fSJunchao Zhang matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), 13383606e59fSJunchao Zhang matrixT->values->data().get(), 13393606e59fSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, 13403606e59fSJunchao Zhang indexBase,cusparse_scalartype);CHKERRCUSPARSE(stat); 13413606e59fSJunchao Zhang 13423606e59fSJunchao Zhang } else { 13433606e59fSJunchao Zhang matstructT->matDescr = NULL; 13443606e59fSJunchao Zhang matrixT->row_offsets->assign(matrixT->row_offsets->size(),indexBase); 13453606e59fSJunchao Zhang } 13463606e59fSJunchao Zhang #endif 1347afb2bd1cSJunchao Zhang #endif 1348aa372e3fSPaul Mullowney } else if (cusparsestruct->format == MAT_CUSPARSE_ELL || cusparsestruct->format == MAT_CUSPARSE_HYB) { 1349afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1350afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 1351afb2bd1cSJunchao Zhang #else 1352aa372e3fSPaul Mullowney CsrMatrix *temp = new CsrMatrix; 135351c6d536SStefano Zampini CsrMatrix *tempT = new CsrMatrix; 135451c6d536SStefano Zampini /* First convert HYB to CSR */ 1355aa372e3fSPaul Mullowney temp->num_rows = A->rmap->n; 1356aa372e3fSPaul Mullowney temp->num_cols = A->cmap->n; 1357aa372e3fSPaul Mullowney temp->num_entries = a->nz; 1358aa372e3fSPaul Mullowney temp->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 1359aa372e3fSPaul Mullowney temp->column_indices = new THRUSTINTARRAY32(a->nz); 1360aa372e3fSPaul Mullowney temp->values = new THRUSTARRAY(a->nz); 1361aa372e3fSPaul Mullowney 1362aa372e3fSPaul Mullowney stat = cusparse_hyb2csr(cusparsestruct->handle, 1363aa372e3fSPaul Mullowney matstruct->descr, (cusparseHybMat_t)matstruct->mat, 1364aa372e3fSPaul Mullowney temp->values->data().get(), 1365aa372e3fSPaul Mullowney temp->row_offsets->data().get(), 136657d48284SJunchao Zhang temp->column_indices->data().get());CHKERRCUSPARSE(stat); 1367aa372e3fSPaul Mullowney 1368aa372e3fSPaul Mullowney /* Next, convert CSR to CSC (i.e. the matrix transpose) */ 1369aa372e3fSPaul Mullowney tempT->num_rows = A->rmap->n; 1370aa372e3fSPaul Mullowney tempT->num_cols = A->cmap->n; 1371aa372e3fSPaul Mullowney tempT->num_entries = a->nz; 1372aa372e3fSPaul Mullowney tempT->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 1373aa372e3fSPaul Mullowney tempT->column_indices = new THRUSTINTARRAY32(a->nz); 1374aa372e3fSPaul Mullowney tempT->values = new THRUSTARRAY(a->nz); 1375aa372e3fSPaul Mullowney 1376aa372e3fSPaul Mullowney stat = cusparse_csr2csc(cusparsestruct->handle, temp->num_rows, 1377aa372e3fSPaul Mullowney temp->num_cols, temp->num_entries, 1378aa372e3fSPaul Mullowney temp->values->data().get(), 1379aa372e3fSPaul Mullowney temp->row_offsets->data().get(), 1380aa372e3fSPaul Mullowney temp->column_indices->data().get(), 1381aa372e3fSPaul Mullowney tempT->values->data().get(), 1382aa372e3fSPaul Mullowney tempT->column_indices->data().get(), 1383aa372e3fSPaul Mullowney tempT->row_offsets->data().get(), 138457d48284SJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase);CHKERRCUSPARSE(stat); 1385aa372e3fSPaul Mullowney 1386aa372e3fSPaul Mullowney /* Last, convert CSC to HYB */ 1387aa372e3fSPaul Mullowney cusparseHybMat_t hybMat; 138857d48284SJunchao Zhang stat = cusparseCreateHybMat(&hybMat);CHKERRCUSPARSE(stat); 1389aa372e3fSPaul Mullowney cusparseHybPartition_t partition = cusparsestruct->format==MAT_CUSPARSE_ELL ? 1390aa372e3fSPaul Mullowney CUSPARSE_HYB_PARTITION_MAX : CUSPARSE_HYB_PARTITION_AUTO; 1391aa372e3fSPaul Mullowney stat = cusparse_csr2hyb(cusparsestruct->handle, A->rmap->n, A->cmap->n, 1392aa372e3fSPaul Mullowney matstructT->descr, tempT->values->data().get(), 1393aa372e3fSPaul Mullowney tempT->row_offsets->data().get(), 1394aa372e3fSPaul Mullowney tempT->column_indices->data().get(), 139557d48284SJunchao Zhang hybMat, 0, partition);CHKERRCUSPARSE(stat); 1396aa372e3fSPaul Mullowney 1397aa372e3fSPaul Mullowney /* assign the pointer */ 1398aa372e3fSPaul Mullowney matstructT->mat = hybMat; 13991a2c6b5cSJunchao Zhang A->transupdated = PETSC_TRUE; 1400aa372e3fSPaul Mullowney /* delete temporaries */ 1401aa372e3fSPaul Mullowney if (tempT) { 1402aa372e3fSPaul Mullowney if (tempT->values) delete (THRUSTARRAY*) tempT->values; 1403aa372e3fSPaul Mullowney if (tempT->column_indices) delete (THRUSTINTARRAY32*) tempT->column_indices; 1404aa372e3fSPaul Mullowney if (tempT->row_offsets) delete (THRUSTINTARRAY32*) tempT->row_offsets; 1405aa372e3fSPaul Mullowney delete (CsrMatrix*) tempT; 1406087f3262SPaul Mullowney } 1407aa372e3fSPaul Mullowney if (temp) { 1408aa372e3fSPaul Mullowney if (temp->values) delete (THRUSTARRAY*) temp->values; 1409aa372e3fSPaul Mullowney if (temp->column_indices) delete (THRUSTINTARRAY32*) temp->column_indices; 1410aa372e3fSPaul Mullowney if (temp->row_offsets) delete (THRUSTINTARRAY32*) temp->row_offsets; 1411aa372e3fSPaul Mullowney delete (CsrMatrix*) temp; 1412aa372e3fSPaul Mullowney } 1413afb2bd1cSJunchao Zhang #endif 1414aa372e3fSPaul Mullowney } 1415a49f1ed0SStefano Zampini } 1416a49f1ed0SStefano Zampini if (cusparsestruct->format == MAT_CUSPARSE_CSR) { /* transpose mat struct may be already present, update data */ 1417a49f1ed0SStefano Zampini CsrMatrix *matrix = (CsrMatrix*)matstruct->mat; 1418a49f1ed0SStefano Zampini CsrMatrix *matrixT = (CsrMatrix*)matstructT->mat; 14192c71b3e2SJacob Faibussowitsch PetscCheckFalse(!matrix,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix"); 14202c71b3e2SJacob Faibussowitsch PetscCheckFalse(!matrix->row_offsets,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix rows"); 14212c71b3e2SJacob Faibussowitsch PetscCheckFalse(!matrix->column_indices,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix cols"); 14222c71b3e2SJacob Faibussowitsch PetscCheckFalse(!matrix->values,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix values"); 14232c71b3e2SJacob Faibussowitsch PetscCheckFalse(!matrixT,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT"); 14242c71b3e2SJacob Faibussowitsch PetscCheckFalse(!matrixT->row_offsets,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT rows"); 14252c71b3e2SJacob Faibussowitsch PetscCheckFalse(!matrixT->column_indices,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT cols"); 14262c71b3e2SJacob Faibussowitsch PetscCheckFalse(!matrixT->values,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT values"); 1427a49f1ed0SStefano Zampini if (!cusparsestruct->rowoffsets_gpu) { /* this may be absent when we did not construct the transpose with csr2csc */ 1428a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n + 1); 1429a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu->assign(a->i,a->i + A->rmap->n + 1); 1430a49f1ed0SStefano Zampini ierr = PetscLogCpuToGpu((A->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 1431a49f1ed0SStefano Zampini } 1432a49f1ed0SStefano Zampini if (!cusparsestruct->csr2csc_i) { 1433a49f1ed0SStefano Zampini THRUSTARRAY csr2csc_a(matrix->num_entries); 1434a49f1ed0SStefano Zampini PetscStackCallThrust(thrust::sequence(thrust::device, csr2csc_a.begin(), csr2csc_a.end(), 0.0)); 1435a49f1ed0SStefano Zampini 1436a49f1ed0SStefano Zampini indexBase = cusparseGetMatIndexBase(matstruct->descr); 1437a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1438a49f1ed0SStefano Zampini void *csr2cscBuffer; 1439a49f1ed0SStefano Zampini size_t csr2cscBufferSize; 1440a49f1ed0SStefano Zampini stat = cusparseCsr2cscEx2_bufferSize(cusparsestruct->handle, A->rmap->n, 1441a49f1ed0SStefano Zampini A->cmap->n, matrix->num_entries, 1442a49f1ed0SStefano Zampini matrix->values->data().get(), 1443a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu->data().get(), 1444a49f1ed0SStefano Zampini matrix->column_indices->data().get(), 1445a49f1ed0SStefano Zampini matrixT->values->data().get(), 1446a49f1ed0SStefano Zampini matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), cusparse_scalartype, 1447a49f1ed0SStefano Zampini CUSPARSE_ACTION_NUMERIC,indexBase, 1448a49f1ed0SStefano Zampini cusparsestruct->csr2cscAlg, &csr2cscBufferSize);CHKERRCUSPARSE(stat); 1449a49f1ed0SStefano Zampini err = cudaMalloc(&csr2cscBuffer,csr2cscBufferSize);CHKERRCUDA(err); 1450a49f1ed0SStefano Zampini #endif 1451a49f1ed0SStefano Zampini 14521a2c6b5cSJunchao Zhang if (matrix->num_entries) { 14531a2c6b5cSJunchao Zhang /* When there are no nonzeros, this routine mistakenly returns CUSPARSE_STATUS_INVALID_VALUE in 14541a2c6b5cSJunchao Zhang mat_tests-ex62_15_mpiaijcusparse on ranks 0 and 2 with CUDA-11. But CUDA-10 is OK. 14551a2c6b5cSJunchao Zhang I checked every parameters and they were just fine. I have no clue why cusparse complains. 14561a2c6b5cSJunchao Zhang 14571a2c6b5cSJunchao Zhang Per https://docs.nvidia.com/cuda/cusparse/index.html#csr2cscEx2, when nnz = 0, matrixT->row_offsets[] 14581a2c6b5cSJunchao Zhang should be filled with indexBase. So I just take a shortcut here. 14591a2c6b5cSJunchao Zhang */ 14601a2c6b5cSJunchao Zhang stat = cusparse_csr2csc(cusparsestruct->handle, A->rmap->n, 14611a2c6b5cSJunchao Zhang A->cmap->n,matrix->num_entries, 14621a2c6b5cSJunchao Zhang csr2csc_a.data().get(), 14631a2c6b5cSJunchao Zhang cusparsestruct->rowoffsets_gpu->data().get(), 14641a2c6b5cSJunchao Zhang matrix->column_indices->data().get(), 1465a49f1ed0SStefano Zampini matrixT->values->data().get(), 1466a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1467a49f1ed0SStefano Zampini matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), cusparse_scalartype, 1468a49f1ed0SStefano Zampini CUSPARSE_ACTION_NUMERIC,indexBase, 14691a2c6b5cSJunchao Zhang cusparsestruct->csr2cscAlg, csr2cscBuffer);CHKERRCUSPARSE(stat); 1470a49f1ed0SStefano Zampini #else 1471a49f1ed0SStefano Zampini matrixT->column_indices->data().get(), matrixT->row_offsets->data().get(), 14721a2c6b5cSJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase);CHKERRCUSPARSE(stat); 1473a49f1ed0SStefano Zampini #endif 14741a2c6b5cSJunchao Zhang } else { 14751a2c6b5cSJunchao Zhang matrixT->row_offsets->assign(matrixT->row_offsets->size(),indexBase); 14761a2c6b5cSJunchao Zhang } 14771a2c6b5cSJunchao Zhang 1478a49f1ed0SStefano Zampini cusparsestruct->csr2csc_i = new THRUSTINTARRAY(matrix->num_entries); 1479a49f1ed0SStefano Zampini PetscStackCallThrust(thrust::transform(thrust::device,matrixT->values->begin(),matrixT->values->end(),cusparsestruct->csr2csc_i->begin(),PetscScalarToPetscInt())); 1480a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1481a49f1ed0SStefano Zampini err = cudaFree(csr2cscBuffer);CHKERRCUDA(err); 1482a49f1ed0SStefano Zampini #endif 1483a49f1ed0SStefano Zampini } 1484a49f1ed0SStefano Zampini PetscStackCallThrust(thrust::copy(thrust::device,thrust::make_permutation_iterator(matrix->values->begin(), cusparsestruct->csr2csc_i->begin()), 1485a49f1ed0SStefano Zampini thrust::make_permutation_iterator(matrix->values->begin(), cusparsestruct->csr2csc_i->end()), 1486a49f1ed0SStefano Zampini matrixT->values->begin())); 1487a49f1ed0SStefano Zampini } 1488ee7b52eaSHong Zhang ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 148985ba7357SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1490213423ffSJunchao Zhang /* the compressed row indices is not used for matTranspose */ 1491213423ffSJunchao Zhang matstructT->cprowIndices = NULL; 1492aa372e3fSPaul Mullowney /* assign the pointer */ 1493aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSE*)A->spptr)->matTranspose = matstructT; 14941a2c6b5cSJunchao Zhang A->transupdated = PETSC_TRUE; 1495bda325fcSPaul Mullowney PetscFunctionReturn(0); 1496bda325fcSPaul Mullowney } 1497bda325fcSPaul Mullowney 1498a49f1ed0SStefano Zampini /* Why do we need to analyze the transposed matrix again? Can't we just use op(A) = CUSPARSE_OPERATION_TRANSPOSE in MatSolve_SeqAIJCUSPARSE? */ 14996fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE(Mat A,Vec bb,Vec xx) 1500bda325fcSPaul Mullowney { 1501c41cb2e2SAlejandro Lamas Daviña PetscInt n = xx->map->n; 1502465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1503465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1504465f34aeSAlejandro Lamas Daviña thrust::device_ptr<const PetscScalar> bGPU; 1505465f34aeSAlejandro Lamas Daviña thrust::device_ptr<PetscScalar> xGPU; 1506bda325fcSPaul Mullowney cusparseStatus_t stat; 1507bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1508aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1509aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1510aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1511b175d8bbSPaul Mullowney PetscErrorCode ierr; 1512bda325fcSPaul Mullowney 1513bda325fcSPaul Mullowney PetscFunctionBegin; 1514aa372e3fSPaul Mullowney /* Analyze the matrix and create the transpose ... on the fly */ 1515aa372e3fSPaul Mullowney if (!loTriFactorT && !upTriFactorT) { 1516bda325fcSPaul Mullowney ierr = MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(A);CHKERRQ(ierr); 1517aa372e3fSPaul Mullowney loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1518aa372e3fSPaul Mullowney upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1519bda325fcSPaul Mullowney } 1520bda325fcSPaul Mullowney 1521bda325fcSPaul Mullowney /* Get the GPU pointers */ 1522c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1523c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 1524c41cb2e2SAlejandro Lamas Daviña xGPU = thrust::device_pointer_cast(xarray); 1525c41cb2e2SAlejandro Lamas Daviña bGPU = thrust::device_pointer_cast(barray); 1526bda325fcSPaul Mullowney 15277a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1528aa372e3fSPaul Mullowney /* First, reorder with the row permutation */ 1529a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->begin()), 1530c41cb2e2SAlejandro Lamas Daviña thrust::make_permutation_iterator(bGPU+n, cusparseTriFactors->rpermIndices->end()), 1531c41cb2e2SAlejandro Lamas Daviña xGPU); 1532aa372e3fSPaul Mullowney 1533aa372e3fSPaul Mullowney /* First, solve U */ 1534aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactorT->solveOp, 1535afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, 15361b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1537afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_entries, 1538afb2bd1cSJunchao Zhang #endif 1539afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactorT->descr, 1540aa372e3fSPaul Mullowney upTriFactorT->csrMat->values->data().get(), 1541aa372e3fSPaul Mullowney upTriFactorT->csrMat->row_offsets->data().get(), 1542aa372e3fSPaul Mullowney upTriFactorT->csrMat->column_indices->data().get(), 1543aa372e3fSPaul Mullowney upTriFactorT->solveInfo, 1544d49cd2b7SBarry Smith xarray, 15451b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1546d49cd2b7SBarry Smith tempGPU->data().get(), 1547d49cd2b7SBarry Smith upTriFactorT->solvePolicy, upTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1548d49cd2b7SBarry Smith #else 1549d49cd2b7SBarry Smith tempGPU->data().get());CHKERRCUSPARSE(stat); 1550afb2bd1cSJunchao Zhang #endif 1551aa372e3fSPaul Mullowney 1552aa372e3fSPaul Mullowney /* Then, solve L */ 1553aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactorT->solveOp, 1554afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, 15551b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1556afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_entries, 1557afb2bd1cSJunchao Zhang #endif 1558afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactorT->descr, 1559aa372e3fSPaul Mullowney loTriFactorT->csrMat->values->data().get(), 1560aa372e3fSPaul Mullowney loTriFactorT->csrMat->row_offsets->data().get(), 1561aa372e3fSPaul Mullowney loTriFactorT->csrMat->column_indices->data().get(), 1562aa372e3fSPaul Mullowney loTriFactorT->solveInfo, 1563d49cd2b7SBarry Smith tempGPU->data().get(), 15641b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1565d49cd2b7SBarry Smith xarray, 1566d49cd2b7SBarry Smith loTriFactorT->solvePolicy, loTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1567d49cd2b7SBarry Smith #else 1568d49cd2b7SBarry Smith xarray);CHKERRCUSPARSE(stat); 1569afb2bd1cSJunchao Zhang #endif 1570aa372e3fSPaul Mullowney 1571aa372e3fSPaul Mullowney /* Last, copy the solution, xGPU, into a temporary with the column permutation ... can't be done in place. */ 1572a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(xGPU, cusparseTriFactors->cpermIndices->begin()), 1573c41cb2e2SAlejandro Lamas Daviña thrust::make_permutation_iterator(xGPU+n, cusparseTriFactors->cpermIndices->end()), 1574aa372e3fSPaul Mullowney tempGPU->begin()); 1575aa372e3fSPaul Mullowney 1576aa372e3fSPaul Mullowney /* Copy the temporary to the full solution. */ 1577a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),tempGPU->begin(), tempGPU->end(), xGPU); 1578bda325fcSPaul Mullowney 1579bda325fcSPaul Mullowney /* restore */ 1580c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1581c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 1582661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1583958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 1584bda325fcSPaul Mullowney PetscFunctionReturn(0); 1585bda325fcSPaul Mullowney } 1586bda325fcSPaul Mullowney 15876fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering(Mat A,Vec bb,Vec xx) 1588bda325fcSPaul Mullowney { 1589465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1590465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1591bda325fcSPaul Mullowney cusparseStatus_t stat; 1592bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1593aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1594aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1595aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1596b175d8bbSPaul Mullowney PetscErrorCode ierr; 1597bda325fcSPaul Mullowney 1598bda325fcSPaul Mullowney PetscFunctionBegin; 1599aa372e3fSPaul Mullowney /* Analyze the matrix and create the transpose ... on the fly */ 1600aa372e3fSPaul Mullowney if (!loTriFactorT && !upTriFactorT) { 1601bda325fcSPaul Mullowney ierr = MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(A);CHKERRQ(ierr); 1602aa372e3fSPaul Mullowney loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1603aa372e3fSPaul Mullowney upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1604bda325fcSPaul Mullowney } 1605bda325fcSPaul Mullowney 1606bda325fcSPaul Mullowney /* Get the GPU pointers */ 1607c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1608c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 1609bda325fcSPaul Mullowney 16107a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1611aa372e3fSPaul Mullowney /* First, solve U */ 1612aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactorT->solveOp, 1613afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, 16141b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1615afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_entries, 1616afb2bd1cSJunchao Zhang #endif 1617afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactorT->descr, 1618aa372e3fSPaul Mullowney upTriFactorT->csrMat->values->data().get(), 1619aa372e3fSPaul Mullowney upTriFactorT->csrMat->row_offsets->data().get(), 1620aa372e3fSPaul Mullowney upTriFactorT->csrMat->column_indices->data().get(), 1621aa372e3fSPaul Mullowney upTriFactorT->solveInfo, 1622d49cd2b7SBarry Smith barray, 16231b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1624d49cd2b7SBarry Smith tempGPU->data().get(), 1625d49cd2b7SBarry Smith upTriFactorT->solvePolicy, upTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1626d49cd2b7SBarry Smith #else 1627d49cd2b7SBarry Smith tempGPU->data().get());CHKERRCUSPARSE(stat); 1628afb2bd1cSJunchao Zhang #endif 1629aa372e3fSPaul Mullowney 1630aa372e3fSPaul Mullowney /* Then, solve L */ 1631aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactorT->solveOp, 1632afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, 16331b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1634afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_entries, 1635afb2bd1cSJunchao Zhang #endif 1636afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactorT->descr, 1637aa372e3fSPaul Mullowney loTriFactorT->csrMat->values->data().get(), 1638aa372e3fSPaul Mullowney loTriFactorT->csrMat->row_offsets->data().get(), 1639aa372e3fSPaul Mullowney loTriFactorT->csrMat->column_indices->data().get(), 1640aa372e3fSPaul Mullowney loTriFactorT->solveInfo, 1641d49cd2b7SBarry Smith tempGPU->data().get(), 16421b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1643d49cd2b7SBarry Smith xarray, 1644d49cd2b7SBarry Smith loTriFactorT->solvePolicy, loTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1645d49cd2b7SBarry Smith #else 1646d49cd2b7SBarry Smith xarray);CHKERRCUSPARSE(stat); 1647afb2bd1cSJunchao Zhang #endif 1648bda325fcSPaul Mullowney 1649bda325fcSPaul Mullowney /* restore */ 1650c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1651c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 1652661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1653958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 1654bda325fcSPaul Mullowney PetscFunctionReturn(0); 1655bda325fcSPaul Mullowney } 1656bda325fcSPaul Mullowney 16576fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE(Mat A,Vec bb,Vec xx) 16589ae82921SPaul Mullowney { 1659465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1660465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1661465f34aeSAlejandro Lamas Daviña thrust::device_ptr<const PetscScalar> bGPU; 1662465f34aeSAlejandro Lamas Daviña thrust::device_ptr<PetscScalar> xGPU; 16639ae82921SPaul Mullowney cusparseStatus_t stat; 16649ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1665aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 1666aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 1667aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1668b175d8bbSPaul Mullowney PetscErrorCode ierr; 16699ae82921SPaul Mullowney 16709ae82921SPaul Mullowney PetscFunctionBegin; 1671ebc8f436SDominic Meiser 1672e057df02SPaul Mullowney /* Get the GPU pointers */ 1673c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1674c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 1675c41cb2e2SAlejandro Lamas Daviña xGPU = thrust::device_pointer_cast(xarray); 1676c41cb2e2SAlejandro Lamas Daviña bGPU = thrust::device_pointer_cast(barray); 16779ae82921SPaul Mullowney 16787a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1679aa372e3fSPaul Mullowney /* First, reorder with the row permutation */ 1680a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->begin()), 1681c41cb2e2SAlejandro Lamas Daviña thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->end()), 16824e4bbfaaSStefano Zampini tempGPU->begin()); 1683aa372e3fSPaul Mullowney 1684aa372e3fSPaul Mullowney /* Next, solve L */ 1685aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactor->solveOp, 1686afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, 16871b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1688afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_entries, 1689afb2bd1cSJunchao Zhang #endif 1690afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactor->descr, 1691aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), 1692aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->data().get(), 1693aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->data().get(), 1694aa372e3fSPaul Mullowney loTriFactor->solveInfo, 1695d49cd2b7SBarry Smith tempGPU->data().get(), 16961b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1697d49cd2b7SBarry Smith xarray, 1698d49cd2b7SBarry Smith loTriFactor->solvePolicy, loTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 1699d49cd2b7SBarry Smith #else 1700d49cd2b7SBarry Smith xarray);CHKERRCUSPARSE(stat); 1701afb2bd1cSJunchao Zhang #endif 1702aa372e3fSPaul Mullowney 1703aa372e3fSPaul Mullowney /* Then, solve U */ 1704aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactor->solveOp, 1705afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, 17061b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1707afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_entries, 1708afb2bd1cSJunchao Zhang #endif 1709afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactor->descr, 1710aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), 1711aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->data().get(), 1712aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->data().get(), 1713d49cd2b7SBarry Smith upTriFactor->solveInfo,xarray, 17141b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1715d49cd2b7SBarry Smith tempGPU->data().get(), 1716d49cd2b7SBarry Smith upTriFactor->solvePolicy, upTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 1717d49cd2b7SBarry Smith #else 1718d49cd2b7SBarry Smith tempGPU->data().get());CHKERRCUSPARSE(stat); 1719afb2bd1cSJunchao Zhang #endif 1720d49cd2b7SBarry Smith 17214e4bbfaaSStefano Zampini /* Last, reorder with the column permutation */ 1722a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(tempGPU->begin(), cusparseTriFactors->cpermIndices->begin()), 17234e4bbfaaSStefano Zampini thrust::make_permutation_iterator(tempGPU->begin(), cusparseTriFactors->cpermIndices->end()), 17244e4bbfaaSStefano Zampini xGPU); 17259ae82921SPaul Mullowney 1726c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1727c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 1728661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1729958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 17309ae82921SPaul Mullowney PetscFunctionReturn(0); 17319ae82921SPaul Mullowney } 17329ae82921SPaul Mullowney 17336fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE_NaturalOrdering(Mat A,Vec bb,Vec xx) 17349ae82921SPaul Mullowney { 1735465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1736465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 17379ae82921SPaul Mullowney cusparseStatus_t stat; 17389ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1739aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 1740aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 1741aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1742b175d8bbSPaul Mullowney PetscErrorCode ierr; 17439ae82921SPaul Mullowney 17449ae82921SPaul Mullowney PetscFunctionBegin; 1745e057df02SPaul Mullowney /* Get the GPU pointers */ 1746c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1747c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 17489ae82921SPaul Mullowney 17497a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1750aa372e3fSPaul Mullowney /* First, solve L */ 1751aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactor->solveOp, 1752afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, 17531b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1754afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_entries, 1755afb2bd1cSJunchao Zhang #endif 1756afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactor->descr, 1757aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), 1758aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->data().get(), 1759aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->data().get(), 1760aa372e3fSPaul Mullowney loTriFactor->solveInfo, 1761d49cd2b7SBarry Smith barray, 17621b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1763d49cd2b7SBarry Smith tempGPU->data().get(), 1764d49cd2b7SBarry Smith loTriFactor->solvePolicy,loTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 1765d49cd2b7SBarry Smith #else 1766d49cd2b7SBarry Smith tempGPU->data().get());CHKERRCUSPARSE(stat); 1767afb2bd1cSJunchao Zhang #endif 1768d49cd2b7SBarry Smith 1769aa372e3fSPaul Mullowney /* Next, solve U */ 1770aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactor->solveOp, 1771afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, 17721b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1773afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_entries, 1774afb2bd1cSJunchao Zhang #endif 1775afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactor->descr, 1776aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), 1777aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->data().get(), 1778aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->data().get(), 1779aa372e3fSPaul Mullowney upTriFactor->solveInfo, 1780d49cd2b7SBarry Smith tempGPU->data().get(), 17811b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1782d49cd2b7SBarry Smith xarray, 1783d49cd2b7SBarry Smith upTriFactor->solvePolicy, upTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 1784d49cd2b7SBarry Smith #else 1785d49cd2b7SBarry Smith xarray);CHKERRCUSPARSE(stat); 1786afb2bd1cSJunchao Zhang #endif 17879ae82921SPaul Mullowney 1788c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1789c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 1790661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1791958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 17929ae82921SPaul Mullowney PetscFunctionReturn(0); 17939ae82921SPaul Mullowney } 17949ae82921SPaul Mullowney 17957e8381f9SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSECopyFromGPU(Mat A) 17967e8381f9SStefano Zampini { 17977e8381f9SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 17987e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 17997e8381f9SStefano Zampini cudaError_t cerr; 18007e8381f9SStefano Zampini PetscErrorCode ierr; 18017e8381f9SStefano Zampini 18027e8381f9SStefano Zampini PetscFunctionBegin; 18037e8381f9SStefano Zampini if (A->offloadmask == PETSC_OFFLOAD_GPU) { 18047e8381f9SStefano Zampini CsrMatrix *matrix = (CsrMatrix*)cusp->mat->mat; 18057e8381f9SStefano Zampini 18067e8381f9SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSECopyFromGPU,A,0,0,0);CHKERRQ(ierr); 18077e8381f9SStefano Zampini cerr = cudaMemcpy(a->a, matrix->values->data().get(), a->nz*sizeof(PetscScalar), cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 18087e8381f9SStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 18097e8381f9SStefano Zampini ierr = PetscLogGpuToCpu(a->nz*sizeof(PetscScalar));CHKERRQ(ierr); 18107e8381f9SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSECopyFromGPU,A,0,0,0);CHKERRQ(ierr); 18117e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_BOTH; 18127e8381f9SStefano Zampini } 18137e8381f9SStefano Zampini PetscFunctionReturn(0); 18147e8381f9SStefano Zampini } 18157e8381f9SStefano Zampini 18167e8381f9SStefano Zampini static PetscErrorCode MatSeqAIJGetArray_SeqAIJCUSPARSE(Mat A,PetscScalar *array[]) 18177e8381f9SStefano Zampini { 18187e8381f9SStefano Zampini PetscErrorCode ierr; 18197e8381f9SStefano Zampini 18207e8381f9SStefano Zampini PetscFunctionBegin; 18217e8381f9SStefano Zampini ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 182267a45760SJunchao Zhang *array = ((Mat_SeqAIJ*)A->data)->a; 182367a45760SJunchao Zhang PetscFunctionReturn(0); 182467a45760SJunchao Zhang } 182567a45760SJunchao Zhang 182667a45760SJunchao Zhang static PetscErrorCode MatSeqAIJRestoreArray_SeqAIJCUSPARSE(Mat A,PetscScalar *array[]) 182767a45760SJunchao Zhang { 182867a45760SJunchao Zhang PetscFunctionBegin; 18297e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_CPU; 183067a45760SJunchao Zhang *array = NULL; 183167a45760SJunchao Zhang PetscFunctionReturn(0); 183267a45760SJunchao Zhang } 183367a45760SJunchao Zhang 183467a45760SJunchao Zhang static PetscErrorCode MatSeqAIJGetArrayRead_SeqAIJCUSPARSE(Mat A,const PetscScalar *array[]) 183567a45760SJunchao Zhang { 183667a45760SJunchao Zhang PetscErrorCode ierr; 183767a45760SJunchao Zhang 183867a45760SJunchao Zhang PetscFunctionBegin; 183967a45760SJunchao Zhang ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 184067a45760SJunchao Zhang *array = ((Mat_SeqAIJ*)A->data)->a; 184167a45760SJunchao Zhang PetscFunctionReturn(0); 184267a45760SJunchao Zhang } 184367a45760SJunchao Zhang 184467a45760SJunchao Zhang static PetscErrorCode MatSeqAIJRestoreArrayRead_SeqAIJCUSPARSE(Mat A,const PetscScalar *array[]) 184567a45760SJunchao Zhang { 184667a45760SJunchao Zhang PetscFunctionBegin; 184767a45760SJunchao Zhang *array = NULL; 184867a45760SJunchao Zhang PetscFunctionReturn(0); 184967a45760SJunchao Zhang } 185067a45760SJunchao Zhang 185167a45760SJunchao Zhang static PetscErrorCode MatSeqAIJGetArrayWrite_SeqAIJCUSPARSE(Mat A,PetscScalar *array[]) 185267a45760SJunchao Zhang { 185367a45760SJunchao Zhang PetscFunctionBegin; 185467a45760SJunchao Zhang *array = ((Mat_SeqAIJ*)A->data)->a; 185567a45760SJunchao Zhang PetscFunctionReturn(0); 185667a45760SJunchao Zhang } 185767a45760SJunchao Zhang 185867a45760SJunchao Zhang static PetscErrorCode MatSeqAIJRestoreArrayWrite_SeqAIJCUSPARSE(Mat A,PetscScalar *array[]) 185967a45760SJunchao Zhang { 186067a45760SJunchao Zhang PetscFunctionBegin; 186167a45760SJunchao Zhang A->offloadmask = PETSC_OFFLOAD_CPU; 186267a45760SJunchao Zhang *array = NULL; 18637e8381f9SStefano Zampini PetscFunctionReturn(0); 18647e8381f9SStefano Zampini } 18657e8381f9SStefano Zampini 1866042217e8SBarry Smith PETSC_INTERN PetscErrorCode MatSeqAIJCUSPARSECopyToGPU(Mat A) 18679ae82921SPaul Mullowney { 1868aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 18697c700b8dSJunchao Zhang Mat_SeqAIJCUSPARSEMultStruct *matstruct = cusparsestruct->mat; 18709ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 1871213423ffSJunchao Zhang PetscInt m = A->rmap->n,*ii,*ridx,tmp; 18729ae82921SPaul Mullowney PetscErrorCode ierr; 1873aa372e3fSPaul Mullowney cusparseStatus_t stat; 1874abb89eb1SStefano Zampini PetscBool both = PETSC_TRUE; 1875b06137fdSPaul Mullowney cudaError_t err; 18769ae82921SPaul Mullowney 18779ae82921SPaul Mullowney PetscFunctionBegin; 18782c71b3e2SJacob Faibussowitsch PetscCheckFalse(A->boundtocpu,PETSC_COMM_SELF,PETSC_ERR_GPU,"Cannot copy to GPU"); 1879c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 1880a49f1ed0SStefano Zampini if (A->nonzerostate == cusparsestruct->nonzerostate && cusparsestruct->format == MAT_CUSPARSE_CSR) { /* Copy values only */ 1881a49f1ed0SStefano Zampini CsrMatrix *matrix; 1882afb2bd1cSJunchao Zhang matrix = (CsrMatrix*)cusparsestruct->mat->mat; 188385ba7357SStefano Zampini 18842c71b3e2SJacob Faibussowitsch PetscCheckFalse(a->nz && !a->a,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CSR values"); 188585ba7357SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 1886afb2bd1cSJunchao Zhang matrix->values->assign(a->a, a->a+a->nz); 188705035670SJunchao Zhang err = WaitForCUDA();CHKERRCUDA(err); 18884863603aSSatish Balay ierr = PetscLogCpuToGpu((a->nz)*sizeof(PetscScalar));CHKERRQ(ierr); 188985ba7357SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 1890a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_FALSE);CHKERRQ(ierr); 189134d6c7a5SJose E. Roman } else { 1892abb89eb1SStefano Zampini PetscInt nnz; 189385ba7357SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 18947c700b8dSJunchao Zhang ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&cusparsestruct->mat,cusparsestruct->format);CHKERRQ(ierr); 1895a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr); 18967c700b8dSJunchao Zhang delete cusparsestruct->workVector; 189781902715SJunchao Zhang delete cusparsestruct->rowoffsets_gpu; 1898a49f1ed0SStefano Zampini cusparsestruct->workVector = NULL; 1899a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu = NULL; 19009ae82921SPaul Mullowney try { 19019ae82921SPaul Mullowney if (a->compressedrow.use) { 19029ae82921SPaul Mullowney m = a->compressedrow.nrows; 19039ae82921SPaul Mullowney ii = a->compressedrow.i; 19049ae82921SPaul Mullowney ridx = a->compressedrow.rindex; 19059ae82921SPaul Mullowney } else { 1906213423ffSJunchao Zhang m = A->rmap->n; 1907213423ffSJunchao Zhang ii = a->i; 1908e6e9a74fSStefano Zampini ridx = NULL; 19099ae82921SPaul Mullowney } 19102c71b3e2SJacob Faibussowitsch PetscCheckFalse(!ii,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CSR row data"); 1911abb89eb1SStefano Zampini if (!a->a) { nnz = ii[m]; both = PETSC_FALSE; } 1912abb89eb1SStefano Zampini else nnz = a->nz; 1913*cbc6b225SStefano Zampini PetscCheckFalse(nnz && !a->j,PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CSR column data"); 19149ae82921SPaul Mullowney 191585ba7357SStefano Zampini /* create cusparse matrix */ 1916abb89eb1SStefano Zampini cusparsestruct->nrows = m; 1917aa372e3fSPaul Mullowney matstruct = new Mat_SeqAIJCUSPARSEMultStruct; 191857d48284SJunchao Zhang stat = cusparseCreateMatDescr(&matstruct->descr);CHKERRCUSPARSE(stat); 191957d48284SJunchao Zhang stat = cusparseSetMatIndexBase(matstruct->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 192057d48284SJunchao Zhang stat = cusparseSetMatType(matstruct->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 19219ae82921SPaul Mullowney 1922afb2bd1cSJunchao Zhang err = cudaMalloc((void **)&(matstruct->alpha_one),sizeof(PetscScalar));CHKERRCUDA(err); 19237656d835SStefano Zampini err = cudaMalloc((void **)&(matstruct->beta_zero),sizeof(PetscScalar));CHKERRCUDA(err); 19247656d835SStefano Zampini err = cudaMalloc((void **)&(matstruct->beta_one), sizeof(PetscScalar));CHKERRCUDA(err); 1925afb2bd1cSJunchao Zhang err = cudaMemcpy(matstruct->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 19267656d835SStefano Zampini err = cudaMemcpy(matstruct->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 19277656d835SStefano Zampini err = cudaMemcpy(matstruct->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 192857d48284SJunchao Zhang stat = cusparseSetPointerMode(cusparsestruct->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 1929b06137fdSPaul Mullowney 1930aa372e3fSPaul Mullowney /* Build a hybrid/ellpack matrix if this option is chosen for the storage */ 1931aa372e3fSPaul Mullowney if (cusparsestruct->format==MAT_CUSPARSE_CSR) { 1932aa372e3fSPaul Mullowney /* set the matrix */ 1933afb2bd1cSJunchao Zhang CsrMatrix *mat= new CsrMatrix; 1934afb2bd1cSJunchao Zhang mat->num_rows = m; 1935afb2bd1cSJunchao Zhang mat->num_cols = A->cmap->n; 1936abb89eb1SStefano Zampini mat->num_entries = nnz; 1937afb2bd1cSJunchao Zhang mat->row_offsets = new THRUSTINTARRAY32(m+1); 1938afb2bd1cSJunchao Zhang mat->row_offsets->assign(ii, ii + m+1); 19399ae82921SPaul Mullowney 1940abb89eb1SStefano Zampini mat->column_indices = new THRUSTINTARRAY32(nnz); 1941abb89eb1SStefano Zampini mat->column_indices->assign(a->j, a->j+nnz); 1942aa372e3fSPaul Mullowney 1943abb89eb1SStefano Zampini mat->values = new THRUSTARRAY(nnz); 1944abb89eb1SStefano Zampini if (a->a) mat->values->assign(a->a, a->a+nnz); 1945aa372e3fSPaul Mullowney 1946aa372e3fSPaul Mullowney /* assign the pointer */ 1947afb2bd1cSJunchao Zhang matstruct->mat = mat; 1948afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1949afb2bd1cSJunchao Zhang if (mat->num_rows) { /* cusparse errors on empty matrices! */ 1950afb2bd1cSJunchao Zhang stat = cusparseCreateCsr(&matstruct->matDescr, 1951afb2bd1cSJunchao Zhang mat->num_rows, mat->num_cols, mat->num_entries, 1952afb2bd1cSJunchao Zhang mat->row_offsets->data().get(), mat->column_indices->data().get(), 1953afb2bd1cSJunchao Zhang mat->values->data().get(), 1954afb2bd1cSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, /* row offset, col idx types due to THRUSTINTARRAY32 */ 1955afb2bd1cSJunchao Zhang CUSPARSE_INDEX_BASE_ZERO,cusparse_scalartype);CHKERRCUSPARSE(stat); 1956afb2bd1cSJunchao Zhang } 1957afb2bd1cSJunchao Zhang #endif 1958aa372e3fSPaul Mullowney } else if (cusparsestruct->format==MAT_CUSPARSE_ELL || cusparsestruct->format==MAT_CUSPARSE_HYB) { 1959afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1960afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 1961afb2bd1cSJunchao Zhang #else 1962afb2bd1cSJunchao Zhang CsrMatrix *mat= new CsrMatrix; 1963afb2bd1cSJunchao Zhang mat->num_rows = m; 1964afb2bd1cSJunchao Zhang mat->num_cols = A->cmap->n; 1965abb89eb1SStefano Zampini mat->num_entries = nnz; 1966afb2bd1cSJunchao Zhang mat->row_offsets = new THRUSTINTARRAY32(m+1); 1967afb2bd1cSJunchao Zhang mat->row_offsets->assign(ii, ii + m+1); 1968aa372e3fSPaul Mullowney 1969abb89eb1SStefano Zampini mat->column_indices = new THRUSTINTARRAY32(nnz); 1970abb89eb1SStefano Zampini mat->column_indices->assign(a->j, a->j+nnz); 1971aa372e3fSPaul Mullowney 1972abb89eb1SStefano Zampini mat->values = new THRUSTARRAY(nnz); 1973abb89eb1SStefano Zampini if (a->a) mat->values->assign(a->a, a->a+nnz); 1974aa372e3fSPaul Mullowney 1975aa372e3fSPaul Mullowney cusparseHybMat_t hybMat; 197657d48284SJunchao Zhang stat = cusparseCreateHybMat(&hybMat);CHKERRCUSPARSE(stat); 1977aa372e3fSPaul Mullowney cusparseHybPartition_t partition = cusparsestruct->format==MAT_CUSPARSE_ELL ? 1978aa372e3fSPaul Mullowney CUSPARSE_HYB_PARTITION_MAX : CUSPARSE_HYB_PARTITION_AUTO; 1979afb2bd1cSJunchao Zhang stat = cusparse_csr2hyb(cusparsestruct->handle, mat->num_rows, mat->num_cols, 1980afb2bd1cSJunchao Zhang matstruct->descr, mat->values->data().get(), 1981afb2bd1cSJunchao Zhang mat->row_offsets->data().get(), 1982afb2bd1cSJunchao Zhang mat->column_indices->data().get(), 198357d48284SJunchao Zhang hybMat, 0, partition);CHKERRCUSPARSE(stat); 1984aa372e3fSPaul Mullowney /* assign the pointer */ 1985aa372e3fSPaul Mullowney matstruct->mat = hybMat; 1986aa372e3fSPaul Mullowney 1987afb2bd1cSJunchao Zhang if (mat) { 1988afb2bd1cSJunchao Zhang if (mat->values) delete (THRUSTARRAY*)mat->values; 1989afb2bd1cSJunchao Zhang if (mat->column_indices) delete (THRUSTINTARRAY32*)mat->column_indices; 1990afb2bd1cSJunchao Zhang if (mat->row_offsets) delete (THRUSTINTARRAY32*)mat->row_offsets; 1991afb2bd1cSJunchao Zhang delete (CsrMatrix*)mat; 1992087f3262SPaul Mullowney } 1993afb2bd1cSJunchao Zhang #endif 1994087f3262SPaul Mullowney } 1995ca45077fSPaul Mullowney 1996aa372e3fSPaul Mullowney /* assign the compressed row indices */ 1997213423ffSJunchao Zhang if (a->compressedrow.use) { 1998213423ffSJunchao Zhang cusparsestruct->workVector = new THRUSTARRAY(m); 1999aa372e3fSPaul Mullowney matstruct->cprowIndices = new THRUSTINTARRAY(m); 2000aa372e3fSPaul Mullowney matstruct->cprowIndices->assign(ridx,ridx+m); 2001213423ffSJunchao Zhang tmp = m; 2002213423ffSJunchao Zhang } else { 2003213423ffSJunchao Zhang cusparsestruct->workVector = NULL; 2004213423ffSJunchao Zhang matstruct->cprowIndices = NULL; 2005213423ffSJunchao Zhang tmp = 0; 2006213423ffSJunchao Zhang } 2007213423ffSJunchao Zhang ierr = PetscLogCpuToGpu(((m+1)+(a->nz))*sizeof(int)+tmp*sizeof(PetscInt)+(3+(a->nz))*sizeof(PetscScalar));CHKERRQ(ierr); 2008aa372e3fSPaul Mullowney 2009aa372e3fSPaul Mullowney /* assign the pointer */ 2010aa372e3fSPaul Mullowney cusparsestruct->mat = matstruct; 20119ae82921SPaul Mullowney } catch(char *ex) { 201298921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 20139ae82921SPaul Mullowney } 201405035670SJunchao Zhang err = WaitForCUDA();CHKERRCUDA(err); 201585ba7357SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 201634d6c7a5SJose E. Roman cusparsestruct->nonzerostate = A->nonzerostate; 201734d6c7a5SJose E. Roman } 2018abb89eb1SStefano Zampini if (both) A->offloadmask = PETSC_OFFLOAD_BOTH; 20199ae82921SPaul Mullowney } 20209ae82921SPaul Mullowney PetscFunctionReturn(0); 20219ae82921SPaul Mullowney } 20229ae82921SPaul Mullowney 2023c41cb2e2SAlejandro Lamas Daviña struct VecCUDAPlusEquals 2024aa372e3fSPaul Mullowney { 2025aa372e3fSPaul Mullowney template <typename Tuple> 2026aa372e3fSPaul Mullowney __host__ __device__ 2027aa372e3fSPaul Mullowney void operator()(Tuple t) 2028aa372e3fSPaul Mullowney { 2029aa372e3fSPaul Mullowney thrust::get<1>(t) = thrust::get<1>(t) + thrust::get<0>(t); 2030aa372e3fSPaul Mullowney } 2031aa372e3fSPaul Mullowney }; 2032aa372e3fSPaul Mullowney 20337e8381f9SStefano Zampini struct VecCUDAEquals 20347e8381f9SStefano Zampini { 20357e8381f9SStefano Zampini template <typename Tuple> 20367e8381f9SStefano Zampini __host__ __device__ 20377e8381f9SStefano Zampini void operator()(Tuple t) 20387e8381f9SStefano Zampini { 20397e8381f9SStefano Zampini thrust::get<1>(t) = thrust::get<0>(t); 20407e8381f9SStefano Zampini } 20417e8381f9SStefano Zampini }; 20427e8381f9SStefano Zampini 2043e6e9a74fSStefano Zampini struct VecCUDAEqualsReverse 2044e6e9a74fSStefano Zampini { 2045e6e9a74fSStefano Zampini template <typename Tuple> 2046e6e9a74fSStefano Zampini __host__ __device__ 2047e6e9a74fSStefano Zampini void operator()(Tuple t) 2048e6e9a74fSStefano Zampini { 2049e6e9a74fSStefano Zampini thrust::get<0>(t) = thrust::get<1>(t); 2050e6e9a74fSStefano Zampini } 2051e6e9a74fSStefano Zampini }; 2052e6e9a74fSStefano Zampini 2053afb2bd1cSJunchao Zhang struct MatMatCusparse { 2054ccdfe979SStefano Zampini PetscBool cisdense; 2055ccdfe979SStefano Zampini PetscScalar *Bt; 2056ccdfe979SStefano Zampini Mat X; 2057fcdce8c4SStefano Zampini PetscBool reusesym; /* Cusparse does not have split symbolic and numeric phases for sparse matmat operations */ 2058fcdce8c4SStefano Zampini PetscLogDouble flops; 2059fcdce8c4SStefano Zampini CsrMatrix *Bcsr; 2060b4285af6SJunchao Zhang 2061afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2062fcdce8c4SStefano Zampini cusparseSpMatDescr_t matSpBDescr; 2063afb2bd1cSJunchao Zhang PetscBool initialized; /* C = alpha op(A) op(B) + beta C */ 2064afb2bd1cSJunchao Zhang cusparseDnMatDescr_t matBDescr; 2065afb2bd1cSJunchao Zhang cusparseDnMatDescr_t matCDescr; 2066afb2bd1cSJunchao Zhang PetscInt Blda,Clda; /* Record leading dimensions of B and C here to detect changes*/ 2067b4285af6SJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,4,0) 2068b4285af6SJunchao Zhang void *dBuffer4; 2069b4285af6SJunchao Zhang void *dBuffer5; 2070b4285af6SJunchao Zhang #endif 2071fcdce8c4SStefano Zampini size_t mmBufferSize; 2072fcdce8c4SStefano Zampini void *mmBuffer; 2073fcdce8c4SStefano Zampini void *mmBuffer2; /* SpGEMM WorkEstimation buffer */ 2074fcdce8c4SStefano Zampini cusparseSpGEMMDescr_t spgemmDesc; 2075afb2bd1cSJunchao Zhang #endif 2076afb2bd1cSJunchao Zhang }; 2077ccdfe979SStefano Zampini 2078ccdfe979SStefano Zampini static PetscErrorCode MatDestroy_MatMatCusparse(void *data) 2079ccdfe979SStefano Zampini { 2080ccdfe979SStefano Zampini PetscErrorCode ierr; 2081ccdfe979SStefano Zampini MatMatCusparse *mmdata = (MatMatCusparse *)data; 2082ccdfe979SStefano Zampini cudaError_t cerr; 2083fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2084fcdce8c4SStefano Zampini cusparseStatus_t stat; 2085fcdce8c4SStefano Zampini #endif 2086ccdfe979SStefano Zampini 2087ccdfe979SStefano Zampini PetscFunctionBegin; 2088ccdfe979SStefano Zampini cerr = cudaFree(mmdata->Bt);CHKERRCUDA(cerr); 2089fcdce8c4SStefano Zampini delete mmdata->Bcsr; 2090afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2091fcdce8c4SStefano Zampini if (mmdata->matSpBDescr) { stat = cusparseDestroySpMat(mmdata->matSpBDescr);CHKERRCUSPARSE(stat); } 2092afb2bd1cSJunchao Zhang if (mmdata->matBDescr) { stat = cusparseDestroyDnMat(mmdata->matBDescr);CHKERRCUSPARSE(stat); } 2093afb2bd1cSJunchao Zhang if (mmdata->matCDescr) { stat = cusparseDestroyDnMat(mmdata->matCDescr);CHKERRCUSPARSE(stat); } 2094fcdce8c4SStefano Zampini if (mmdata->spgemmDesc) { stat = cusparseSpGEMM_destroyDescr(mmdata->spgemmDesc);CHKERRCUSPARSE(stat); } 2095b4285af6SJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,4,0) 2096b4285af6SJunchao Zhang if (mmdata->dBuffer4) { cerr = cudaFree(mmdata->dBuffer4);CHKERRCUDA(cerr); } 2097b4285af6SJunchao Zhang if (mmdata->dBuffer5) { cerr = cudaFree(mmdata->dBuffer5);CHKERRCUDA(cerr); } 2098b4285af6SJunchao Zhang #endif 2099b4285af6SJunchao Zhang if (mmdata->mmBuffer) { cerr = cudaFree(mmdata->mmBuffer);CHKERRCUDA(cerr); } 2100b4285af6SJunchao Zhang if (mmdata->mmBuffer2) { cerr = cudaFree(mmdata->mmBuffer2);CHKERRCUDA(cerr); } 2101afb2bd1cSJunchao Zhang #endif 2102ccdfe979SStefano Zampini ierr = MatDestroy(&mmdata->X);CHKERRQ(ierr); 2103ccdfe979SStefano Zampini ierr = PetscFree(data);CHKERRQ(ierr); 2104ccdfe979SStefano Zampini PetscFunctionReturn(0); 2105ccdfe979SStefano Zampini } 2106ccdfe979SStefano Zampini 2107ccdfe979SStefano Zampini PETSC_INTERN PetscErrorCode MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Private(Mat,Mat,Mat,PetscBool,PetscBool); 2108ccdfe979SStefano Zampini 2109ccdfe979SStefano Zampini static PetscErrorCode MatProductNumeric_SeqAIJCUSPARSE_SeqDENSECUDA(Mat C) 2110ccdfe979SStefano Zampini { 2111ccdfe979SStefano Zampini Mat_Product *product = C->product; 2112ccdfe979SStefano Zampini Mat A,B; 2113afb2bd1cSJunchao Zhang PetscInt m,n,blda,clda; 2114ccdfe979SStefano Zampini PetscBool flg,biscuda; 2115ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSE *cusp; 2116ccdfe979SStefano Zampini cusparseStatus_t stat; 2117ccdfe979SStefano Zampini cusparseOperation_t opA; 2118ccdfe979SStefano Zampini const PetscScalar *barray; 2119ccdfe979SStefano Zampini PetscScalar *carray; 2120ccdfe979SStefano Zampini PetscErrorCode ierr; 2121ccdfe979SStefano Zampini MatMatCusparse *mmdata; 2122ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *mat; 2123ccdfe979SStefano Zampini CsrMatrix *csrmat; 2124ccdfe979SStefano Zampini 2125ccdfe979SStefano Zampini PetscFunctionBegin; 2126ccdfe979SStefano Zampini MatCheckProduct(C,1); 21272c71b3e2SJacob Faibussowitsch PetscCheckFalse(!C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data empty"); 2128ccdfe979SStefano Zampini mmdata = (MatMatCusparse*)product->data; 2129ccdfe979SStefano Zampini A = product->A; 2130ccdfe979SStefano Zampini B = product->B; 2131ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 21322c71b3e2SJacob Faibussowitsch PetscCheckFalse(!flg,PetscObjectComm((PetscObject)A),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 2133ccdfe979SStefano Zampini /* currently CopyToGpu does not copy if the matrix is bound to CPU 2134ccdfe979SStefano Zampini Instead of silently accepting the wrong answer, I prefer to raise the error */ 21352c71b3e2SJacob Faibussowitsch PetscCheckFalse(A->boundtocpu,PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONG,"Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 2136ccdfe979SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 2137ccdfe979SStefano Zampini cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2138ccdfe979SStefano Zampini switch (product->type) { 2139ccdfe979SStefano Zampini case MATPRODUCT_AB: 2140ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 2141ccdfe979SStefano Zampini mat = cusp->mat; 2142ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2143ccdfe979SStefano Zampini m = A->rmap->n; 2144ccdfe979SStefano Zampini n = B->cmap->n; 2145ccdfe979SStefano Zampini break; 2146ccdfe979SStefano Zampini case MATPRODUCT_AtB: 21471a2c6b5cSJunchao Zhang if (!A->form_explicit_transpose) { 2148e6e9a74fSStefano Zampini mat = cusp->mat; 2149e6e9a74fSStefano Zampini opA = CUSPARSE_OPERATION_TRANSPOSE; 2150e6e9a74fSStefano Zampini } else { 21513606e59fSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTranspose(A);CHKERRQ(ierr); 2152ccdfe979SStefano Zampini mat = cusp->matTranspose; 2153ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2154e6e9a74fSStefano Zampini } 2155ccdfe979SStefano Zampini m = A->cmap->n; 2156ccdfe979SStefano Zampini n = B->cmap->n; 2157ccdfe979SStefano Zampini break; 2158ccdfe979SStefano Zampini case MATPRODUCT_ABt: 2159ccdfe979SStefano Zampini case MATPRODUCT_RARt: 2160ccdfe979SStefano Zampini mat = cusp->mat; 2161ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2162ccdfe979SStefano Zampini m = A->rmap->n; 2163ccdfe979SStefano Zampini n = B->rmap->n; 2164ccdfe979SStefano Zampini break; 2165ccdfe979SStefano Zampini default: 216698921bdaSJacob Faibussowitsch SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 2167ccdfe979SStefano Zampini } 21682c71b3e2SJacob Faibussowitsch PetscCheckFalse(!mat,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 2169ccdfe979SStefano Zampini csrmat = (CsrMatrix*)mat->mat; 2170ccdfe979SStefano Zampini /* if the user passed a CPU matrix, copy the data to the GPU */ 2171ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)B,MATSEQDENSECUDA,&biscuda);CHKERRQ(ierr); 2172afb2bd1cSJunchao Zhang if (!biscuda) {ierr = MatConvert(B,MATSEQDENSECUDA,MAT_INPLACE_MATRIX,&B);CHKERRQ(ierr);} 2173ccdfe979SStefano Zampini ierr = MatDenseCUDAGetArrayRead(B,&barray);CHKERRQ(ierr); 2174afb2bd1cSJunchao Zhang 2175ccdfe979SStefano Zampini ierr = MatDenseGetLDA(B,&blda);CHKERRQ(ierr); 2176c8378d12SStefano Zampini if (product->type == MATPRODUCT_RARt || product->type == MATPRODUCT_PtAP) { 2177c8378d12SStefano Zampini ierr = MatDenseCUDAGetArrayWrite(mmdata->X,&carray);CHKERRQ(ierr); 2178c8378d12SStefano Zampini ierr = MatDenseGetLDA(mmdata->X,&clda);CHKERRQ(ierr); 2179c8378d12SStefano Zampini } else { 2180c8378d12SStefano Zampini ierr = MatDenseCUDAGetArrayWrite(C,&carray);CHKERRQ(ierr); 2181c8378d12SStefano Zampini ierr = MatDenseGetLDA(C,&clda);CHKERRQ(ierr); 2182c8378d12SStefano Zampini } 2183c8378d12SStefano Zampini 2184c8378d12SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2185afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2186afb2bd1cSJunchao Zhang cusparseOperation_t opB = (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) ? CUSPARSE_OPERATION_TRANSPOSE : CUSPARSE_OPERATION_NON_TRANSPOSE; 2187a5b23f4aSJose E. Roman /* (re)allocate mmBuffer if not initialized or LDAs are different */ 2188afb2bd1cSJunchao Zhang if (!mmdata->initialized || mmdata->Blda != blda || mmdata->Clda != clda) { 2189fcdce8c4SStefano Zampini size_t mmBufferSize; 2190afb2bd1cSJunchao Zhang if (mmdata->initialized && mmdata->Blda != blda) {stat = cusparseDestroyDnMat(mmdata->matBDescr);CHKERRCUSPARSE(stat); mmdata->matBDescr = NULL;} 2191afb2bd1cSJunchao Zhang if (!mmdata->matBDescr) { 2192afb2bd1cSJunchao Zhang stat = cusparseCreateDnMat(&mmdata->matBDescr,B->rmap->n,B->cmap->n,blda,(void*)barray,cusparse_scalartype,CUSPARSE_ORDER_COL);CHKERRCUSPARSE(stat); 2193afb2bd1cSJunchao Zhang mmdata->Blda = blda; 2194afb2bd1cSJunchao Zhang } 2195c8378d12SStefano Zampini 2196afb2bd1cSJunchao Zhang if (mmdata->initialized && mmdata->Clda != clda) {stat = cusparseDestroyDnMat(mmdata->matCDescr);CHKERRCUSPARSE(stat); mmdata->matCDescr = NULL;} 2197afb2bd1cSJunchao Zhang if (!mmdata->matCDescr) { /* matCDescr is for C or mmdata->X */ 2198afb2bd1cSJunchao Zhang stat = cusparseCreateDnMat(&mmdata->matCDescr,m,n,clda,(void*)carray,cusparse_scalartype,CUSPARSE_ORDER_COL);CHKERRCUSPARSE(stat); 2199afb2bd1cSJunchao Zhang mmdata->Clda = clda; 2200afb2bd1cSJunchao Zhang } 2201afb2bd1cSJunchao Zhang 2202afb2bd1cSJunchao Zhang if (!mat->matDescr) { 2203afb2bd1cSJunchao Zhang stat = cusparseCreateCsr(&mat->matDescr, 2204afb2bd1cSJunchao Zhang csrmat->num_rows, csrmat->num_cols, csrmat->num_entries, 2205afb2bd1cSJunchao Zhang csrmat->row_offsets->data().get(), csrmat->column_indices->data().get(), 2206afb2bd1cSJunchao Zhang csrmat->values->data().get(), 2207afb2bd1cSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, /* row offset, col idx types due to THRUSTINTARRAY32 */ 2208afb2bd1cSJunchao Zhang CUSPARSE_INDEX_BASE_ZERO,cusparse_scalartype);CHKERRCUSPARSE(stat); 2209afb2bd1cSJunchao Zhang } 2210afb2bd1cSJunchao Zhang stat = cusparseSpMM_bufferSize(cusp->handle,opA,opB,mat->alpha_one, 2211afb2bd1cSJunchao Zhang mat->matDescr,mmdata->matBDescr,mat->beta_zero, 2212afb2bd1cSJunchao Zhang mmdata->matCDescr,cusparse_scalartype, 2213fcdce8c4SStefano Zampini cusp->spmmAlg,&mmBufferSize);CHKERRCUSPARSE(stat); 2214fcdce8c4SStefano Zampini if ((mmdata->mmBuffer && mmdata->mmBufferSize < mmBufferSize) || !mmdata->mmBuffer) { 2215ee7b52eaSHong Zhang cudaError_t cerr; 2216fcdce8c4SStefano Zampini cerr = cudaFree(mmdata->mmBuffer);CHKERRCUDA(cerr); 2217fcdce8c4SStefano Zampini cerr = cudaMalloc(&mmdata->mmBuffer,mmBufferSize);CHKERRCUDA(cerr); 2218fcdce8c4SStefano Zampini mmdata->mmBufferSize = mmBufferSize; 2219fcdce8c4SStefano Zampini } 2220afb2bd1cSJunchao Zhang mmdata->initialized = PETSC_TRUE; 2221afb2bd1cSJunchao Zhang } else { 2222afb2bd1cSJunchao Zhang /* to be safe, always update pointers of the mats */ 2223afb2bd1cSJunchao Zhang stat = cusparseSpMatSetValues(mat->matDescr,csrmat->values->data().get());CHKERRCUSPARSE(stat); 2224afb2bd1cSJunchao Zhang stat = cusparseDnMatSetValues(mmdata->matBDescr,(void*)barray);CHKERRCUSPARSE(stat); 2225afb2bd1cSJunchao Zhang stat = cusparseDnMatSetValues(mmdata->matCDescr,(void*)carray);CHKERRCUSPARSE(stat); 2226afb2bd1cSJunchao Zhang } 2227afb2bd1cSJunchao Zhang 2228afb2bd1cSJunchao Zhang /* do cusparseSpMM, which supports transpose on B */ 2229afb2bd1cSJunchao Zhang stat = cusparseSpMM(cusp->handle,opA,opB,mat->alpha_one, 2230afb2bd1cSJunchao Zhang mat->matDescr,mmdata->matBDescr,mat->beta_zero, 2231afb2bd1cSJunchao Zhang mmdata->matCDescr,cusparse_scalartype, 2232fcdce8c4SStefano Zampini cusp->spmmAlg,mmdata->mmBuffer);CHKERRCUSPARSE(stat); 2233afb2bd1cSJunchao Zhang #else 2234afb2bd1cSJunchao Zhang PetscInt k; 2235afb2bd1cSJunchao Zhang /* cusparseXcsrmm does not support transpose on B */ 2236ccdfe979SStefano Zampini if (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) { 2237ccdfe979SStefano Zampini cublasHandle_t cublasv2handle; 2238ccdfe979SStefano Zampini cublasStatus_t cerr; 2239ccdfe979SStefano Zampini 2240ccdfe979SStefano Zampini ierr = PetscCUBLASGetHandle(&cublasv2handle);CHKERRQ(ierr); 2241ccdfe979SStefano Zampini cerr = cublasXgeam(cublasv2handle,CUBLAS_OP_T,CUBLAS_OP_T, 2242ccdfe979SStefano Zampini B->cmap->n,B->rmap->n, 2243ccdfe979SStefano Zampini &PETSC_CUSPARSE_ONE ,barray,blda, 2244ccdfe979SStefano Zampini &PETSC_CUSPARSE_ZERO,barray,blda, 2245ccdfe979SStefano Zampini mmdata->Bt,B->cmap->n);CHKERRCUBLAS(cerr); 2246ccdfe979SStefano Zampini blda = B->cmap->n; 2247afb2bd1cSJunchao Zhang k = B->cmap->n; 2248afb2bd1cSJunchao Zhang } else { 2249afb2bd1cSJunchao Zhang k = B->rmap->n; 2250ccdfe979SStefano Zampini } 2251ccdfe979SStefano Zampini 2252afb2bd1cSJunchao Zhang /* perform the MatMat operation, op(A) is m x k, op(B) is k x n */ 2253ccdfe979SStefano Zampini stat = cusparse_csr_spmm(cusp->handle,opA,m,n,k, 2254afb2bd1cSJunchao Zhang csrmat->num_entries,mat->alpha_one,mat->descr, 2255ccdfe979SStefano Zampini csrmat->values->data().get(), 2256ccdfe979SStefano Zampini csrmat->row_offsets->data().get(), 2257ccdfe979SStefano Zampini csrmat->column_indices->data().get(), 2258ccdfe979SStefano Zampini mmdata->Bt ? mmdata->Bt : barray,blda,mat->beta_zero, 2259ccdfe979SStefano Zampini carray,clda);CHKERRCUSPARSE(stat); 2260afb2bd1cSJunchao Zhang #endif 2261c8378d12SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2262c8378d12SStefano Zampini ierr = PetscLogGpuFlops(n*2.0*csrmat->num_entries);CHKERRQ(ierr); 2263ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayRead(B,&barray);CHKERRQ(ierr); 2264ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt) { 2265ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayWrite(mmdata->X,&carray);CHKERRQ(ierr); 2266ccdfe979SStefano Zampini ierr = MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Private(B,mmdata->X,C,PETSC_FALSE,PETSC_FALSE);CHKERRQ(ierr); 2267ccdfe979SStefano Zampini } else if (product->type == MATPRODUCT_PtAP) { 2268ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayWrite(mmdata->X,&carray);CHKERRQ(ierr); 2269ccdfe979SStefano Zampini ierr = MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Private(B,mmdata->X,C,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr); 2270ccdfe979SStefano Zampini } else { 2271ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayWrite(C,&carray);CHKERRQ(ierr); 2272ccdfe979SStefano Zampini } 2273ccdfe979SStefano Zampini if (mmdata->cisdense) { 2274ccdfe979SStefano Zampini ierr = MatConvert(C,MATSEQDENSE,MAT_INPLACE_MATRIX,&C);CHKERRQ(ierr); 2275ccdfe979SStefano Zampini } 2276ccdfe979SStefano Zampini if (!biscuda) { 2277ccdfe979SStefano Zampini ierr = MatConvert(B,MATSEQDENSE,MAT_INPLACE_MATRIX,&B);CHKERRQ(ierr); 2278ccdfe979SStefano Zampini } 2279ccdfe979SStefano Zampini PetscFunctionReturn(0); 2280ccdfe979SStefano Zampini } 2281ccdfe979SStefano Zampini 2282ccdfe979SStefano Zampini static PetscErrorCode MatProductSymbolic_SeqAIJCUSPARSE_SeqDENSECUDA(Mat C) 2283ccdfe979SStefano Zampini { 2284ccdfe979SStefano Zampini Mat_Product *product = C->product; 2285ccdfe979SStefano Zampini Mat A,B; 2286ccdfe979SStefano Zampini PetscInt m,n; 2287ccdfe979SStefano Zampini PetscBool cisdense,flg; 2288ccdfe979SStefano Zampini PetscErrorCode ierr; 2289ccdfe979SStefano Zampini MatMatCusparse *mmdata; 2290ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSE *cusp; 2291ccdfe979SStefano Zampini 2292ccdfe979SStefano Zampini PetscFunctionBegin; 2293ccdfe979SStefano Zampini MatCheckProduct(C,1); 22942c71b3e2SJacob Faibussowitsch PetscCheckFalse(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data not empty"); 2295ccdfe979SStefano Zampini A = product->A; 2296ccdfe979SStefano Zampini B = product->B; 2297ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 22982c71b3e2SJacob Faibussowitsch PetscCheckFalse(!flg,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 2299ccdfe979SStefano Zampini cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 23002c71b3e2SJacob Faibussowitsch PetscCheckFalse(cusp->format != MAT_CUSPARSE_CSR,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2301ccdfe979SStefano Zampini switch (product->type) { 2302ccdfe979SStefano Zampini case MATPRODUCT_AB: 2303ccdfe979SStefano Zampini m = A->rmap->n; 2304ccdfe979SStefano Zampini n = B->cmap->n; 2305ccdfe979SStefano Zampini break; 2306ccdfe979SStefano Zampini case MATPRODUCT_AtB: 2307ccdfe979SStefano Zampini m = A->cmap->n; 2308ccdfe979SStefano Zampini n = B->cmap->n; 2309ccdfe979SStefano Zampini break; 2310ccdfe979SStefano Zampini case MATPRODUCT_ABt: 2311ccdfe979SStefano Zampini m = A->rmap->n; 2312ccdfe979SStefano Zampini n = B->rmap->n; 2313ccdfe979SStefano Zampini break; 2314ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 2315ccdfe979SStefano Zampini m = B->cmap->n; 2316ccdfe979SStefano Zampini n = B->cmap->n; 2317ccdfe979SStefano Zampini break; 2318ccdfe979SStefano Zampini case MATPRODUCT_RARt: 2319ccdfe979SStefano Zampini m = B->rmap->n; 2320ccdfe979SStefano Zampini n = B->rmap->n; 2321ccdfe979SStefano Zampini break; 2322ccdfe979SStefano Zampini default: 232398921bdaSJacob Faibussowitsch SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 2324ccdfe979SStefano Zampini } 2325ccdfe979SStefano Zampini ierr = MatSetSizes(C,m,n,m,n);CHKERRQ(ierr); 2326ccdfe979SStefano Zampini /* if C is of type MATSEQDENSE (CPU), perform the operation on the GPU and then copy on the CPU */ 2327ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)C,MATSEQDENSE,&cisdense);CHKERRQ(ierr); 2328ccdfe979SStefano Zampini ierr = MatSetType(C,MATSEQDENSECUDA);CHKERRQ(ierr); 2329ccdfe979SStefano Zampini 2330ccdfe979SStefano Zampini /* product data */ 2331ccdfe979SStefano Zampini ierr = PetscNew(&mmdata);CHKERRQ(ierr); 2332ccdfe979SStefano Zampini mmdata->cisdense = cisdense; 2333afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_LT(11,0,0) 2334afb2bd1cSJunchao Zhang /* cusparseXcsrmm does not support transpose on B, so we allocate buffer to store B^T */ 2335ccdfe979SStefano Zampini if (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) { 2336afb2bd1cSJunchao Zhang cudaError_t cerr = cudaMalloc((void**)&mmdata->Bt,(size_t)B->rmap->n*(size_t)B->cmap->n*sizeof(PetscScalar));CHKERRCUDA(cerr); 2337ccdfe979SStefano Zampini } 2338afb2bd1cSJunchao Zhang #endif 2339ccdfe979SStefano Zampini /* for these products we need intermediate storage */ 2340ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt || product->type == MATPRODUCT_PtAP) { 2341ccdfe979SStefano Zampini ierr = MatCreate(PetscObjectComm((PetscObject)C),&mmdata->X);CHKERRQ(ierr); 2342ccdfe979SStefano Zampini ierr = MatSetType(mmdata->X,MATSEQDENSECUDA);CHKERRQ(ierr); 2343ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt) { /* do not preallocate, since the first call to MatDenseCUDAGetArray will preallocate on the GPU for us */ 2344ccdfe979SStefano Zampini ierr = MatSetSizes(mmdata->X,A->rmap->n,B->rmap->n,A->rmap->n,B->rmap->n);CHKERRQ(ierr); 2345ccdfe979SStefano Zampini } else { 2346ccdfe979SStefano Zampini ierr = MatSetSizes(mmdata->X,A->rmap->n,B->cmap->n,A->rmap->n,B->cmap->n);CHKERRQ(ierr); 2347ccdfe979SStefano Zampini } 2348ccdfe979SStefano Zampini } 2349ccdfe979SStefano Zampini C->product->data = mmdata; 2350ccdfe979SStefano Zampini C->product->destroy = MatDestroy_MatMatCusparse; 2351ccdfe979SStefano Zampini 2352ccdfe979SStefano Zampini C->ops->productnumeric = MatProductNumeric_SeqAIJCUSPARSE_SeqDENSECUDA; 2353ccdfe979SStefano Zampini PetscFunctionReturn(0); 2354ccdfe979SStefano Zampini } 2355ccdfe979SStefano Zampini 2356fcdce8c4SStefano Zampini static PetscErrorCode MatProductNumeric_SeqAIJCUSPARSE_SeqAIJCUSPARSE(Mat C) 2357ccdfe979SStefano Zampini { 2358ccdfe979SStefano Zampini Mat_Product *product = C->product; 2359fcdce8c4SStefano Zampini Mat A,B; 2360fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp,*Bcusp,*Ccusp; 2361fcdce8c4SStefano Zampini Mat_SeqAIJ *c = (Mat_SeqAIJ*)C->data; 2362fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Amat,*Bmat,*Cmat; 2363fcdce8c4SStefano Zampini CsrMatrix *Acsr,*Bcsr,*Ccsr; 2364fcdce8c4SStefano Zampini PetscBool flg; 2365ccdfe979SStefano Zampini PetscErrorCode ierr; 2366fcdce8c4SStefano Zampini cusparseStatus_t stat; 2367fcdce8c4SStefano Zampini cudaError_t cerr; 2368fcdce8c4SStefano Zampini MatProductType ptype; 2369fcdce8c4SStefano Zampini MatMatCusparse *mmdata; 2370fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2371fcdce8c4SStefano Zampini cusparseSpMatDescr_t BmatSpDescr; 2372fcdce8c4SStefano Zampini #endif 2373b4285af6SJunchao Zhang cusparseOperation_t opA = CUSPARSE_OPERATION_NON_TRANSPOSE,opB = CUSPARSE_OPERATION_NON_TRANSPOSE; /* cuSPARSE spgemm doesn't support transpose yet */ 2374ccdfe979SStefano Zampini 2375ccdfe979SStefano Zampini PetscFunctionBegin; 2376ccdfe979SStefano Zampini MatCheckProduct(C,1); 23772c71b3e2SJacob Faibussowitsch PetscCheckFalse(!C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data empty"); 2378fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)C,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 23792c71b3e2SJacob Faibussowitsch PetscCheckFalse(!flg,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for C of type %s",((PetscObject)C)->type_name); 2380fcdce8c4SStefano Zampini mmdata = (MatMatCusparse*)C->product->data; 2381fcdce8c4SStefano Zampini A = product->A; 2382fcdce8c4SStefano Zampini B = product->B; 2383fcdce8c4SStefano Zampini if (mmdata->reusesym) { /* this happens when api_user is true, meaning that the matrix values have been already computed in the MatProductSymbolic phase */ 2384fcdce8c4SStefano Zampini mmdata->reusesym = PETSC_FALSE; 2385fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)C->spptr; 23862c71b3e2SJacob Faibussowitsch PetscCheckFalse(Ccusp->format != MAT_CUSPARSE_CSR,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2387fcdce8c4SStefano Zampini Cmat = Ccusp->mat; 23882c71b3e2SJacob Faibussowitsch PetscCheckFalse(!Cmat,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C mult struct for product type %s",MatProductTypes[C->product->type]); 2389fcdce8c4SStefano Zampini Ccsr = (CsrMatrix*)Cmat->mat; 23902c71b3e2SJacob Faibussowitsch PetscCheckFalse(!Ccsr,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C CSR struct"); 2391fcdce8c4SStefano Zampini goto finalize; 2392fcdce8c4SStefano Zampini } 2393fcdce8c4SStefano Zampini if (!c->nz) goto finalize; 2394fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 23952c71b3e2SJacob Faibussowitsch PetscCheckFalse(!flg,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 2396fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)B,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 23972c71b3e2SJacob Faibussowitsch PetscCheckFalse(!flg,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for B of type %s",((PetscObject)B)->type_name); 23982c71b3e2SJacob Faibussowitsch PetscCheckFalse(A->boundtocpu,PetscObjectComm((PetscObject)C),PETSC_ERR_ARG_WRONG,"Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 23992c71b3e2SJacob Faibussowitsch PetscCheckFalse(B->boundtocpu,PetscObjectComm((PetscObject)C),PETSC_ERR_ARG_WRONG,"Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 2400fcdce8c4SStefano Zampini Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2401fcdce8c4SStefano Zampini Bcusp = (Mat_SeqAIJCUSPARSE*)B->spptr; 2402fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)C->spptr; 24032c71b3e2SJacob Faibussowitsch PetscCheckFalse(Acusp->format != MAT_CUSPARSE_CSR,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 24042c71b3e2SJacob Faibussowitsch PetscCheckFalse(Bcusp->format != MAT_CUSPARSE_CSR,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 24052c71b3e2SJacob Faibussowitsch PetscCheckFalse(Ccusp->format != MAT_CUSPARSE_CSR,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2406fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 2407fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 2408fcdce8c4SStefano Zampini 2409fcdce8c4SStefano Zampini ptype = product->type; 2410fa046f9fSJunchao Zhang if (A->symmetric && ptype == MATPRODUCT_AtB) { 2411fa046f9fSJunchao Zhang ptype = MATPRODUCT_AB; 24122c71b3e2SJacob Faibussowitsch PetscCheckFalse(!product->symbolic_used_the_fact_A_is_symmetric,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Symbolic should have been built using the fact that A is symmetric"); 2413fa046f9fSJunchao Zhang } 2414fa046f9fSJunchao Zhang if (B->symmetric && ptype == MATPRODUCT_ABt) { 2415fa046f9fSJunchao Zhang ptype = MATPRODUCT_AB; 24162c71b3e2SJacob Faibussowitsch PetscCheckFalse(!product->symbolic_used_the_fact_B_is_symmetric,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Symbolic should have been built using the fact that B is symmetric"); 2417fa046f9fSJunchao Zhang } 2418fcdce8c4SStefano Zampini switch (ptype) { 2419fcdce8c4SStefano Zampini case MATPRODUCT_AB: 2420fcdce8c4SStefano Zampini Amat = Acusp->mat; 2421fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2422fcdce8c4SStefano Zampini break; 2423fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 2424fcdce8c4SStefano Zampini Amat = Acusp->matTranspose; 2425fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2426fcdce8c4SStefano Zampini break; 2427fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 2428fcdce8c4SStefano Zampini Amat = Acusp->mat; 2429fcdce8c4SStefano Zampini Bmat = Bcusp->matTranspose; 2430fcdce8c4SStefano Zampini break; 2431fcdce8c4SStefano Zampini default: 243298921bdaSJacob Faibussowitsch SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 2433fcdce8c4SStefano Zampini } 2434fcdce8c4SStefano Zampini Cmat = Ccusp->mat; 24352c71b3e2SJacob Faibussowitsch PetscCheckFalse(!Amat,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A mult struct for product type %s",MatProductTypes[ptype]); 24362c71b3e2SJacob Faibussowitsch PetscCheckFalse(!Bmat,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B mult struct for product type %s",MatProductTypes[ptype]); 24372c71b3e2SJacob Faibussowitsch PetscCheckFalse(!Cmat,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C mult struct for product type %s",MatProductTypes[ptype]); 2438fcdce8c4SStefano Zampini Acsr = (CsrMatrix*)Amat->mat; 2439fcdce8c4SStefano Zampini Bcsr = mmdata->Bcsr ? mmdata->Bcsr : (CsrMatrix*)Bmat->mat; /* B may be in compressed row storage */ 2440fcdce8c4SStefano Zampini Ccsr = (CsrMatrix*)Cmat->mat; 24412c71b3e2SJacob Faibussowitsch PetscCheckFalse(!Acsr,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A CSR struct"); 24422c71b3e2SJacob Faibussowitsch PetscCheckFalse(!Bcsr,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B CSR struct"); 24432c71b3e2SJacob Faibussowitsch PetscCheckFalse(!Ccsr,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C CSR struct"); 2444fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2445fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2446fcdce8c4SStefano Zampini BmatSpDescr = mmdata->Bcsr ? mmdata->matSpBDescr : Bmat->matDescr; /* B may be in compressed row storage */ 2447b4285af6SJunchao Zhang stat = cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 2448b4285af6SJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,4,0) 2449b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_compute(Ccusp->handle, opA, opB, 2450b4285af6SJunchao Zhang Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2451b4285af6SJunchao Zhang cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2452b4285af6SJunchao Zhang mmdata->spgemmDesc);CHKERRCUSPARSE(stat); 2453b4285af6SJunchao Zhang #else 2454b4285af6SJunchao Zhang stat = cusparseSpGEMM_compute(Ccusp->handle, opA, opB, 2455fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2456fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2457fcdce8c4SStefano Zampini mmdata->spgemmDesc, &mmdata->mmBufferSize, mmdata->mmBuffer);CHKERRCUSPARSE(stat); 2458b4285af6SJunchao Zhang stat = cusparseSpGEMM_copy(Ccusp->handle, opA, opB, 2459fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2460fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc);CHKERRCUSPARSE(stat); 2461b4285af6SJunchao Zhang #endif 2462fcdce8c4SStefano Zampini #else 2463b4285af6SJunchao Zhang stat = cusparse_csr_spgemm(Ccusp->handle, opA, opB, 2464fcdce8c4SStefano Zampini Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, 2465fcdce8c4SStefano Zampini Amat->descr, Acsr->num_entries, Acsr->values->data().get(), Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), 2466fcdce8c4SStefano Zampini Bmat->descr, Bcsr->num_entries, Bcsr->values->data().get(), Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2467fcdce8c4SStefano Zampini Cmat->descr, Ccsr->values->data().get(), Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get());CHKERRCUSPARSE(stat); 2468fcdce8c4SStefano Zampini #endif 2469fcdce8c4SStefano Zampini ierr = PetscLogGpuFlops(mmdata->flops);CHKERRQ(ierr); 2470fcdce8c4SStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 2471fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2472fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_GPU; 2473fcdce8c4SStefano Zampini finalize: 2474fcdce8c4SStefano Zampini /* shorter version of MatAssemblyEnd_SeqAIJ */ 24757d3de750SJacob Faibussowitsch ierr = PetscInfo(C,"Matrix size: %" PetscInt_FMT " X %" PetscInt_FMT "; storage space: 0 unneeded,%" PetscInt_FMT " used\n",C->rmap->n,C->cmap->n,c->nz);CHKERRQ(ierr); 2476fcdce8c4SStefano Zampini ierr = PetscInfo(C,"Number of mallocs during MatSetValues() is 0\n");CHKERRQ(ierr); 24777d3de750SJacob Faibussowitsch ierr = PetscInfo(C,"Maximum nonzeros in any row is %" PetscInt_FMT "\n",c->rmax);CHKERRQ(ierr); 2478fcdce8c4SStefano Zampini c->reallocs = 0; 2479fcdce8c4SStefano Zampini C->info.mallocs += 0; 2480fcdce8c4SStefano Zampini C->info.nz_unneeded = 0; 2481fcdce8c4SStefano Zampini C->assembled = C->was_assembled = PETSC_TRUE; 2482fcdce8c4SStefano Zampini C->num_ass++; 2483ccdfe979SStefano Zampini PetscFunctionReturn(0); 2484ccdfe979SStefano Zampini } 2485fcdce8c4SStefano Zampini 2486fcdce8c4SStefano Zampini static PetscErrorCode MatProductSymbolic_SeqAIJCUSPARSE_SeqAIJCUSPARSE(Mat C) 2487fcdce8c4SStefano Zampini { 2488fcdce8c4SStefano Zampini Mat_Product *product = C->product; 2489fcdce8c4SStefano Zampini Mat A,B; 2490fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp,*Bcusp,*Ccusp; 2491fcdce8c4SStefano Zampini Mat_SeqAIJ *a,*b,*c; 2492fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Amat,*Bmat,*Cmat; 2493fcdce8c4SStefano Zampini CsrMatrix *Acsr,*Bcsr,*Ccsr; 2494fcdce8c4SStefano Zampini PetscInt i,j,m,n,k; 2495fcdce8c4SStefano Zampini PetscBool flg; 2496fcdce8c4SStefano Zampini PetscErrorCode ierr; 2497fcdce8c4SStefano Zampini cusparseStatus_t stat; 2498fcdce8c4SStefano Zampini cudaError_t cerr; 2499fcdce8c4SStefano Zampini MatProductType ptype; 2500fcdce8c4SStefano Zampini MatMatCusparse *mmdata; 2501fcdce8c4SStefano Zampini PetscLogDouble flops; 2502fcdce8c4SStefano Zampini PetscBool biscompressed,ciscompressed; 2503fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2504fcdce8c4SStefano Zampini int64_t C_num_rows1, C_num_cols1, C_nnz1; 2505fcdce8c4SStefano Zampini cusparseSpMatDescr_t BmatSpDescr; 2506fcdce8c4SStefano Zampini #else 2507fcdce8c4SStefano Zampini int cnz; 2508fcdce8c4SStefano Zampini #endif 2509b4285af6SJunchao Zhang cusparseOperation_t opA = CUSPARSE_OPERATION_NON_TRANSPOSE,opB = CUSPARSE_OPERATION_NON_TRANSPOSE; /* cuSPARSE spgemm doesn't support transpose yet */ 2510fcdce8c4SStefano Zampini 2511fcdce8c4SStefano Zampini PetscFunctionBegin; 2512fcdce8c4SStefano Zampini MatCheckProduct(C,1); 25132c71b3e2SJacob Faibussowitsch PetscCheckFalse(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data not empty"); 2514fcdce8c4SStefano Zampini A = product->A; 2515fcdce8c4SStefano Zampini B = product->B; 2516fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 25172c71b3e2SJacob Faibussowitsch PetscCheckFalse(!flg,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 2518fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)B,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 25192c71b3e2SJacob Faibussowitsch PetscCheckFalse(!flg,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for B of type %s",((PetscObject)B)->type_name); 2520fcdce8c4SStefano Zampini a = (Mat_SeqAIJ*)A->data; 2521fcdce8c4SStefano Zampini b = (Mat_SeqAIJ*)B->data; 2522fcdce8c4SStefano Zampini /* product data */ 2523fcdce8c4SStefano Zampini ierr = PetscNew(&mmdata);CHKERRQ(ierr); 2524fcdce8c4SStefano Zampini C->product->data = mmdata; 2525fcdce8c4SStefano Zampini C->product->destroy = MatDestroy_MatMatCusparse; 2526fcdce8c4SStefano Zampini 2527fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 2528fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 2529d60bce21SJunchao Zhang Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr; /* Access spptr after MatSeqAIJCUSPARSECopyToGPU, not before */ 2530d60bce21SJunchao Zhang Bcusp = (Mat_SeqAIJCUSPARSE*)B->spptr; 25312c71b3e2SJacob Faibussowitsch PetscCheckFalse(Acusp->format != MAT_CUSPARSE_CSR,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 25322c71b3e2SJacob Faibussowitsch PetscCheckFalse(Bcusp->format != MAT_CUSPARSE_CSR,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2533d60bce21SJunchao Zhang 2534fcdce8c4SStefano Zampini ptype = product->type; 2535fa046f9fSJunchao Zhang if (A->symmetric && ptype == MATPRODUCT_AtB) { 2536fa046f9fSJunchao Zhang ptype = MATPRODUCT_AB; 2537fa046f9fSJunchao Zhang product->symbolic_used_the_fact_A_is_symmetric = PETSC_TRUE; 2538fa046f9fSJunchao Zhang } 2539fa046f9fSJunchao Zhang if (B->symmetric && ptype == MATPRODUCT_ABt) { 2540fa046f9fSJunchao Zhang ptype = MATPRODUCT_AB; 2541fa046f9fSJunchao Zhang product->symbolic_used_the_fact_B_is_symmetric = PETSC_TRUE; 2542fa046f9fSJunchao Zhang } 2543fcdce8c4SStefano Zampini biscompressed = PETSC_FALSE; 2544fcdce8c4SStefano Zampini ciscompressed = PETSC_FALSE; 2545fcdce8c4SStefano Zampini switch (ptype) { 2546fcdce8c4SStefano Zampini case MATPRODUCT_AB: 2547fcdce8c4SStefano Zampini m = A->rmap->n; 2548fcdce8c4SStefano Zampini n = B->cmap->n; 2549fcdce8c4SStefano Zampini k = A->cmap->n; 2550fcdce8c4SStefano Zampini Amat = Acusp->mat; 2551fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2552fcdce8c4SStefano Zampini if (a->compressedrow.use) ciscompressed = PETSC_TRUE; 2553fcdce8c4SStefano Zampini if (b->compressedrow.use) biscompressed = PETSC_TRUE; 2554fcdce8c4SStefano Zampini break; 2555fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 2556fcdce8c4SStefano Zampini m = A->cmap->n; 2557fcdce8c4SStefano Zampini n = B->cmap->n; 2558fcdce8c4SStefano Zampini k = A->rmap->n; 25593606e59fSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTranspose(A);CHKERRQ(ierr); 2560fcdce8c4SStefano Zampini Amat = Acusp->matTranspose; 2561fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2562fcdce8c4SStefano Zampini if (b->compressedrow.use) biscompressed = PETSC_TRUE; 2563fcdce8c4SStefano Zampini break; 2564fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 2565fcdce8c4SStefano Zampini m = A->rmap->n; 2566fcdce8c4SStefano Zampini n = B->rmap->n; 2567fcdce8c4SStefano Zampini k = A->cmap->n; 25683606e59fSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTranspose(B);CHKERRQ(ierr); 2569fcdce8c4SStefano Zampini Amat = Acusp->mat; 2570fcdce8c4SStefano Zampini Bmat = Bcusp->matTranspose; 2571fcdce8c4SStefano Zampini if (a->compressedrow.use) ciscompressed = PETSC_TRUE; 2572fcdce8c4SStefano Zampini break; 2573fcdce8c4SStefano Zampini default: 257498921bdaSJacob Faibussowitsch SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 2575fcdce8c4SStefano Zampini } 2576fcdce8c4SStefano Zampini 2577fcdce8c4SStefano Zampini /* create cusparse matrix */ 2578fcdce8c4SStefano Zampini ierr = MatSetSizes(C,m,n,m,n);CHKERRQ(ierr); 2579fcdce8c4SStefano Zampini ierr = MatSetType(C,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 2580fcdce8c4SStefano Zampini c = (Mat_SeqAIJ*)C->data; 2581fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)C->spptr; 2582fcdce8c4SStefano Zampini Cmat = new Mat_SeqAIJCUSPARSEMultStruct; 2583fcdce8c4SStefano Zampini Ccsr = new CsrMatrix; 2584fcdce8c4SStefano Zampini 2585fcdce8c4SStefano Zampini c->compressedrow.use = ciscompressed; 2586fcdce8c4SStefano Zampini if (c->compressedrow.use) { /* if a is in compressed row, than c will be in compressed row format */ 2587fcdce8c4SStefano Zampini c->compressedrow.nrows = a->compressedrow.nrows; 2588fcdce8c4SStefano Zampini ierr = PetscMalloc2(c->compressedrow.nrows+1,&c->compressedrow.i,c->compressedrow.nrows,&c->compressedrow.rindex);CHKERRQ(ierr); 2589fcdce8c4SStefano Zampini ierr = PetscArraycpy(c->compressedrow.rindex,a->compressedrow.rindex,c->compressedrow.nrows);CHKERRQ(ierr); 2590fcdce8c4SStefano Zampini Ccusp->workVector = new THRUSTARRAY(c->compressedrow.nrows); 2591fcdce8c4SStefano Zampini Cmat->cprowIndices = new THRUSTINTARRAY(c->compressedrow.nrows); 2592fcdce8c4SStefano Zampini Cmat->cprowIndices->assign(c->compressedrow.rindex,c->compressedrow.rindex + c->compressedrow.nrows); 2593fcdce8c4SStefano Zampini } else { 2594fcdce8c4SStefano Zampini c->compressedrow.nrows = 0; 2595fcdce8c4SStefano Zampini c->compressedrow.i = NULL; 2596fcdce8c4SStefano Zampini c->compressedrow.rindex = NULL; 2597fcdce8c4SStefano Zampini Ccusp->workVector = NULL; 2598fcdce8c4SStefano Zampini Cmat->cprowIndices = NULL; 2599fcdce8c4SStefano Zampini } 2600fcdce8c4SStefano Zampini Ccusp->nrows = ciscompressed ? c->compressedrow.nrows : m; 2601fcdce8c4SStefano Zampini Ccusp->mat = Cmat; 2602fcdce8c4SStefano Zampini Ccusp->mat->mat = Ccsr; 2603fcdce8c4SStefano Zampini Ccsr->num_rows = Ccusp->nrows; 2604fcdce8c4SStefano Zampini Ccsr->num_cols = n; 2605fcdce8c4SStefano Zampini Ccsr->row_offsets = new THRUSTINTARRAY32(Ccusp->nrows+1); 2606fcdce8c4SStefano Zampini stat = cusparseCreateMatDescr(&Cmat->descr);CHKERRCUSPARSE(stat); 2607fcdce8c4SStefano Zampini stat = cusparseSetMatIndexBase(Cmat->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 2608fcdce8c4SStefano Zampini stat = cusparseSetMatType(Cmat->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 2609fcdce8c4SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->alpha_one),sizeof(PetscScalar));CHKERRCUDA(cerr); 2610fcdce8c4SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_zero),sizeof(PetscScalar));CHKERRCUDA(cerr); 2611fcdce8c4SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_one), sizeof(PetscScalar));CHKERRCUDA(cerr); 2612fcdce8c4SStefano Zampini cerr = cudaMemcpy(Cmat->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 2613fcdce8c4SStefano Zampini cerr = cudaMemcpy(Cmat->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 2614fcdce8c4SStefano Zampini cerr = cudaMemcpy(Cmat->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 2615fcdce8c4SStefano Zampini if (!Ccsr->num_rows || !Ccsr->num_cols || !a->nz || !b->nz) { /* cusparse raise errors in different calls when matrices have zero rows/columns! */ 2616fcdce8c4SStefano Zampini thrust::fill(thrust::device,Ccsr->row_offsets->begin(),Ccsr->row_offsets->end(),0); 2617fcdce8c4SStefano Zampini c->nz = 0; 2618fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 2619fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 2620fcdce8c4SStefano Zampini goto finalizesym; 2621fcdce8c4SStefano Zampini } 2622fcdce8c4SStefano Zampini 26232c71b3e2SJacob Faibussowitsch PetscCheckFalse(!Amat,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A mult struct for product type %s",MatProductTypes[ptype]); 26242c71b3e2SJacob Faibussowitsch PetscCheckFalse(!Bmat,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B mult struct for product type %s",MatProductTypes[ptype]); 2625fcdce8c4SStefano Zampini Acsr = (CsrMatrix*)Amat->mat; 2626fcdce8c4SStefano Zampini if (!biscompressed) { 2627fcdce8c4SStefano Zampini Bcsr = (CsrMatrix*)Bmat->mat; 2628fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2629fcdce8c4SStefano Zampini BmatSpDescr = Bmat->matDescr; 2630fcdce8c4SStefano Zampini #endif 2631fcdce8c4SStefano Zampini } else { /* we need to use row offsets for the full matrix */ 2632fcdce8c4SStefano Zampini CsrMatrix *cBcsr = (CsrMatrix*)Bmat->mat; 2633fcdce8c4SStefano Zampini Bcsr = new CsrMatrix; 2634fcdce8c4SStefano Zampini Bcsr->num_rows = B->rmap->n; 2635fcdce8c4SStefano Zampini Bcsr->num_cols = cBcsr->num_cols; 2636fcdce8c4SStefano Zampini Bcsr->num_entries = cBcsr->num_entries; 2637fcdce8c4SStefano Zampini Bcsr->column_indices = cBcsr->column_indices; 2638fcdce8c4SStefano Zampini Bcsr->values = cBcsr->values; 2639fcdce8c4SStefano Zampini if (!Bcusp->rowoffsets_gpu) { 2640fcdce8c4SStefano Zampini Bcusp->rowoffsets_gpu = new THRUSTINTARRAY32(B->rmap->n + 1); 2641fcdce8c4SStefano Zampini Bcusp->rowoffsets_gpu->assign(b->i,b->i + B->rmap->n + 1); 2642fcdce8c4SStefano Zampini ierr = PetscLogCpuToGpu((B->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 2643fcdce8c4SStefano Zampini } 2644fcdce8c4SStefano Zampini Bcsr->row_offsets = Bcusp->rowoffsets_gpu; 2645fcdce8c4SStefano Zampini mmdata->Bcsr = Bcsr; 2646fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2647fcdce8c4SStefano Zampini if (Bcsr->num_rows && Bcsr->num_cols) { 2648fcdce8c4SStefano Zampini stat = cusparseCreateCsr(&mmdata->matSpBDescr, Bcsr->num_rows, Bcsr->num_cols, Bcsr->num_entries, 2649fcdce8c4SStefano Zampini Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2650fcdce8c4SStefano Zampini Bcsr->values->data().get(), 2651fcdce8c4SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 2652fcdce8c4SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 2653fcdce8c4SStefano Zampini } 2654fcdce8c4SStefano Zampini BmatSpDescr = mmdata->matSpBDescr; 2655fcdce8c4SStefano Zampini #endif 2656fcdce8c4SStefano Zampini } 26572c71b3e2SJacob Faibussowitsch PetscCheckFalse(!Acsr,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A CSR struct"); 26582c71b3e2SJacob Faibussowitsch PetscCheckFalse(!Bcsr,PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B CSR struct"); 2659fcdce8c4SStefano Zampini /* precompute flops count */ 2660fcdce8c4SStefano Zampini if (ptype == MATPRODUCT_AB) { 2661fcdce8c4SStefano Zampini for (i=0, flops = 0; i<A->rmap->n; i++) { 2662fcdce8c4SStefano Zampini const PetscInt st = a->i[i]; 2663fcdce8c4SStefano Zampini const PetscInt en = a->i[i+1]; 2664fcdce8c4SStefano Zampini for (j=st; j<en; j++) { 2665fcdce8c4SStefano Zampini const PetscInt brow = a->j[j]; 2666fcdce8c4SStefano Zampini flops += 2.*(b->i[brow+1] - b->i[brow]); 2667fcdce8c4SStefano Zampini } 2668fcdce8c4SStefano Zampini } 2669fcdce8c4SStefano Zampini } else if (ptype == MATPRODUCT_AtB) { 2670fcdce8c4SStefano Zampini for (i=0, flops = 0; i<A->rmap->n; i++) { 2671fcdce8c4SStefano Zampini const PetscInt anzi = a->i[i+1] - a->i[i]; 2672fcdce8c4SStefano Zampini const PetscInt bnzi = b->i[i+1] - b->i[i]; 2673fcdce8c4SStefano Zampini flops += (2.*anzi)*bnzi; 2674fcdce8c4SStefano Zampini } 2675fcdce8c4SStefano Zampini } else { /* TODO */ 2676fcdce8c4SStefano Zampini flops = 0.; 2677fcdce8c4SStefano Zampini } 2678fcdce8c4SStefano Zampini 2679fcdce8c4SStefano Zampini mmdata->flops = flops; 2680fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2681b4285af6SJunchao Zhang 2682fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2683fcdce8c4SStefano Zampini stat = cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 2684fcdce8c4SStefano Zampini stat = cusparseCreateCsr(&Cmat->matDescr, Ccsr->num_rows, Ccsr->num_cols, 0, 2685fcdce8c4SStefano Zampini NULL, NULL, NULL, 2686fcdce8c4SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 2687fcdce8c4SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 2688fcdce8c4SStefano Zampini stat = cusparseSpGEMM_createDescr(&mmdata->spgemmDesc);CHKERRCUSPARSE(stat); 2689b4285af6SJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,4,0) 2690b4285af6SJunchao Zhang { 2691b4285af6SJunchao Zhang /* cusparseSpGEMMreuse has more reasonable APIs than cusparseSpGEMM, so we prefer to use it. 2692b4285af6SJunchao Zhang We follow the sample code at https://github.com/NVIDIA/CUDALibrarySamples/blob/master/cuSPARSE/spgemm_reuse 2693b4285af6SJunchao Zhang */ 2694b4285af6SJunchao Zhang void* dBuffer1 = NULL; 2695b4285af6SJunchao Zhang void* dBuffer2 = NULL; 2696b4285af6SJunchao Zhang void* dBuffer3 = NULL; 2697b4285af6SJunchao Zhang /* dBuffer4, dBuffer5 are needed by cusparseSpGEMMreuse_compute, and therefore are stored in mmdata */ 2698b4285af6SJunchao Zhang size_t bufferSize1 = 0; 2699b4285af6SJunchao Zhang size_t bufferSize2 = 0; 2700b4285af6SJunchao Zhang size_t bufferSize3 = 0; 2701b4285af6SJunchao Zhang size_t bufferSize4 = 0; 2702b4285af6SJunchao Zhang size_t bufferSize5 = 0; 2703b4285af6SJunchao Zhang 2704b4285af6SJunchao Zhang /*----------------------------------------------------------------------*/ 2705b4285af6SJunchao Zhang /* ask bufferSize1 bytes for external memory */ 2706b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_workEstimation(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, 2707b4285af6SJunchao Zhang CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, 2708b4285af6SJunchao Zhang &bufferSize1, NULL);CHKERRCUSPARSE(stat); 2709b4285af6SJunchao Zhang cerr = cudaMalloc((void**) &dBuffer1, bufferSize1);CHKERRCUDA(cerr); 2710b4285af6SJunchao Zhang /* inspect the matrices A and B to understand the memory requirement for the next step */ 2711b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_workEstimation(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, 2712b4285af6SJunchao Zhang CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, 2713b4285af6SJunchao Zhang &bufferSize1, dBuffer1);CHKERRCUSPARSE(stat); 2714b4285af6SJunchao Zhang 2715b4285af6SJunchao Zhang /*----------------------------------------------------------------------*/ 2716b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_nnz(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, 2717b4285af6SJunchao Zhang CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, 2718b4285af6SJunchao Zhang &bufferSize2, NULL, &bufferSize3, NULL, &bufferSize4, NULL);CHKERRCUSPARSE(stat); 2719b4285af6SJunchao Zhang cerr = cudaMalloc((void**) &dBuffer2, bufferSize2);CHKERRCUDA(cerr); 2720b4285af6SJunchao Zhang cerr = cudaMalloc((void**) &dBuffer3, bufferSize3);CHKERRCUDA(cerr); 2721b4285af6SJunchao Zhang cerr = cudaMalloc((void**) &mmdata->dBuffer4, bufferSize4);CHKERRCUDA(cerr); 2722b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_nnz(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, 2723b4285af6SJunchao Zhang CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, 2724b4285af6SJunchao Zhang &bufferSize2, dBuffer2, &bufferSize3, dBuffer3, &bufferSize4, mmdata->dBuffer4);CHKERRCUSPARSE(stat); 2725b4285af6SJunchao Zhang cerr = cudaFree(dBuffer1);CHKERRCUDA(cerr); 2726b4285af6SJunchao Zhang cerr = cudaFree(dBuffer2);CHKERRCUDA(cerr); 2727b4285af6SJunchao Zhang 2728b4285af6SJunchao Zhang /*----------------------------------------------------------------------*/ 2729b4285af6SJunchao Zhang /* get matrix C non-zero entries C_nnz1 */ 2730b4285af6SJunchao Zhang stat = cusparseSpMatGetSize(Cmat->matDescr, &C_num_rows1, &C_num_cols1, &C_nnz1);CHKERRCUSPARSE(stat); 2731b4285af6SJunchao Zhang c->nz = (PetscInt) C_nnz1; 2732b4285af6SJunchao Zhang /* allocate matrix C */ 2733b4285af6SJunchao Zhang Ccsr->column_indices = new THRUSTINTARRAY32(c->nz);CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2734b4285af6SJunchao Zhang Ccsr->values = new THRUSTARRAY(c->nz);CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2735b4285af6SJunchao Zhang /* update matC with the new pointers */ 2736b4285af6SJunchao Zhang stat = cusparseCsrSetPointers(Cmat->matDescr, Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get(), 2737b4285af6SJunchao Zhang Ccsr->values->data().get());CHKERRCUSPARSE(stat); 2738b4285af6SJunchao Zhang 2739b4285af6SJunchao Zhang /*----------------------------------------------------------------------*/ 2740b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_copy(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, 2741b4285af6SJunchao Zhang CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, 2742b4285af6SJunchao Zhang &bufferSize5, NULL);CHKERRCUSPARSE(stat); 2743b4285af6SJunchao Zhang cerr = cudaMalloc((void**) &mmdata->dBuffer5, bufferSize5);CHKERRCUDA(cerr); 2744b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_copy(Ccusp->handle, opA, opB, Amat->matDescr, BmatSpDescr, Cmat->matDescr, 2745b4285af6SJunchao Zhang CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc, 2746b4285af6SJunchao Zhang &bufferSize5, mmdata->dBuffer5);CHKERRCUSPARSE(stat); 2747b4285af6SJunchao Zhang cerr = cudaFree(dBuffer3);CHKERRCUDA(cerr); 2748b4285af6SJunchao Zhang stat = cusparseSpGEMMreuse_compute(Ccusp->handle, opA, opB, 2749b4285af6SJunchao Zhang Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2750b4285af6SJunchao Zhang cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2751b4285af6SJunchao Zhang mmdata->spgemmDesc);CHKERRCUSPARSE(stat); 27527d3de750SJacob Faibussowitsch ierr = PetscInfo(C,"Buffer sizes for type %s, result %" PetscInt_FMT " x %" PetscInt_FMT " (k %" PetscInt_FMT ", nzA %" PetscInt_FMT ", nzB %" PetscInt_FMT ", nzC %" PetscInt_FMT ") are: %ldKB %ldKB\n",MatProductTypes[ptype],m,n,k,a->nz,b->nz,c->nz,bufferSize4/1024,bufferSize5/1024);CHKERRQ(ierr); 2753b4285af6SJunchao Zhang } 2754ae37ee31SJunchao Zhang #else 2755b4285af6SJunchao Zhang size_t bufSize2; 2756fcdce8c4SStefano Zampini /* ask bufferSize bytes for external memory */ 2757b4285af6SJunchao Zhang stat = cusparseSpGEMM_workEstimation(Ccusp->handle, opA, opB, 2758fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2759fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2760fcdce8c4SStefano Zampini mmdata->spgemmDesc, &bufSize2, NULL);CHKERRCUSPARSE(stat); 2761bfcc3627SStefano Zampini cerr = cudaMalloc((void**) &mmdata->mmBuffer2, bufSize2);CHKERRCUDA(cerr); 2762fcdce8c4SStefano Zampini /* inspect the matrices A and B to understand the memory requirement for the next step */ 2763b4285af6SJunchao Zhang stat = cusparseSpGEMM_workEstimation(Ccusp->handle, opA, opB, 2764fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2765fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2766fcdce8c4SStefano Zampini mmdata->spgemmDesc, &bufSize2, mmdata->mmBuffer2);CHKERRCUSPARSE(stat); 2767fcdce8c4SStefano Zampini /* ask bufferSize again bytes for external memory */ 2768b4285af6SJunchao Zhang stat = cusparseSpGEMM_compute(Ccusp->handle, opA, opB, 2769fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2770fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2771fcdce8c4SStefano Zampini mmdata->spgemmDesc, &mmdata->mmBufferSize, NULL);CHKERRCUSPARSE(stat); 2772fcdce8c4SStefano Zampini /* The CUSPARSE documentation is not clear, nor the API 2773fcdce8c4SStefano Zampini We need both buffers to perform the operations properly! 2774fcdce8c4SStefano Zampini mmdata->mmBuffer2 does not appear anywhere in the compute/copy API 2775fcdce8c4SStefano Zampini it only appears for the workEstimation stuff, but it seems it is needed in compute, so probably the address 2776fcdce8c4SStefano Zampini is stored in the descriptor! What a messy API... */ 2777bfcc3627SStefano Zampini cerr = cudaMalloc((void**) &mmdata->mmBuffer, mmdata->mmBufferSize);CHKERRCUDA(cerr); 2778fcdce8c4SStefano Zampini /* compute the intermediate product of A * B */ 2779b4285af6SJunchao Zhang stat = cusparseSpGEMM_compute(Ccusp->handle, opA, opB, 2780fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2781fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2782fcdce8c4SStefano Zampini mmdata->spgemmDesc, &mmdata->mmBufferSize, mmdata->mmBuffer);CHKERRCUSPARSE(stat); 2783fcdce8c4SStefano Zampini /* get matrix C non-zero entries C_nnz1 */ 2784fcdce8c4SStefano Zampini stat = cusparseSpMatGetSize(Cmat->matDescr, &C_num_rows1, &C_num_cols1, &C_nnz1);CHKERRCUSPARSE(stat); 2785fcdce8c4SStefano Zampini c->nz = (PetscInt) C_nnz1; 27867d3de750SJacob Faibussowitsch ierr = PetscInfo(C,"Buffer sizes for type %s, result %" PetscInt_FMT " x %" PetscInt_FMT " (k %" PetscInt_FMT ", nzA %" PetscInt_FMT ", nzB %" PetscInt_FMT ", nzC %" PetscInt_FMT ") are: %ldKB %ldKB\n",MatProductTypes[ptype],m,n,k,a->nz,b->nz,c->nz,bufSize2/1024,mmdata->mmBufferSize/1024);CHKERRQ(ierr); 2787fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 2788fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2789fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 2790fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2791fcdce8c4SStefano Zampini stat = cusparseCsrSetPointers(Cmat->matDescr, Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get(), 2792fcdce8c4SStefano Zampini Ccsr->values->data().get());CHKERRCUSPARSE(stat); 2793b4285af6SJunchao Zhang stat = cusparseSpGEMM_copy(Ccusp->handle, opA, opB, 2794fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2795fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc);CHKERRCUSPARSE(stat); 2796ae37ee31SJunchao Zhang #endif // PETSC_PKG_CUDA_VERSION_GE(11,4,0) 2797fcdce8c4SStefano Zampini #else 2798fcdce8c4SStefano Zampini stat = cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_HOST);CHKERRCUSPARSE(stat); 2799b4285af6SJunchao Zhang stat = cusparseXcsrgemmNnz(Ccusp->handle, opA, opB, 2800fcdce8c4SStefano Zampini Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, 2801fcdce8c4SStefano Zampini Amat->descr, Acsr->num_entries, Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), 2802fcdce8c4SStefano Zampini Bmat->descr, Bcsr->num_entries, Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2803fcdce8c4SStefano Zampini Cmat->descr, Ccsr->row_offsets->data().get(), &cnz);CHKERRCUSPARSE(stat); 2804fcdce8c4SStefano Zampini c->nz = cnz; 2805fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 2806fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2807fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 2808fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2809fcdce8c4SStefano Zampini 2810fcdce8c4SStefano Zampini stat = cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 2811fcdce8c4SStefano Zampini /* with the old gemm interface (removed from 11.0 on) we cannot compute the symbolic factorization only. 2812fcdce8c4SStefano Zampini I have tried using the gemm2 interface (alpha * A * B + beta * D), which allows to do symbolic by passing NULL for values, but it seems quite buggy when 2813fcdce8c4SStefano Zampini D is NULL, despite the fact that CUSPARSE documentation claims it is supported! */ 2814b4285af6SJunchao Zhang stat = cusparse_csr_spgemm(Ccusp->handle, opA, opB, 2815fcdce8c4SStefano Zampini Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, 2816fcdce8c4SStefano Zampini Amat->descr, Acsr->num_entries, Acsr->values->data().get(), Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), 2817fcdce8c4SStefano Zampini Bmat->descr, Bcsr->num_entries, Bcsr->values->data().get(), Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2818fcdce8c4SStefano Zampini Cmat->descr, Ccsr->values->data().get(), Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get());CHKERRCUSPARSE(stat); 2819fcdce8c4SStefano Zampini #endif 2820fcdce8c4SStefano Zampini ierr = PetscLogGpuFlops(mmdata->flops);CHKERRQ(ierr); 2821fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2822fcdce8c4SStefano Zampini finalizesym: 2823fcdce8c4SStefano Zampini c->singlemalloc = PETSC_FALSE; 2824fcdce8c4SStefano Zampini c->free_a = PETSC_TRUE; 2825fcdce8c4SStefano Zampini c->free_ij = PETSC_TRUE; 2826fcdce8c4SStefano Zampini ierr = PetscMalloc1(m+1,&c->i);CHKERRQ(ierr); 2827fcdce8c4SStefano Zampini ierr = PetscMalloc1(c->nz,&c->j);CHKERRQ(ierr); 2828fcdce8c4SStefano Zampini if (PetscDefined(USE_64BIT_INDICES)) { /* 32 to 64 bit conversion on the GPU and then copy to host (lazy) */ 2829fcdce8c4SStefano Zampini PetscInt *d_i = c->i; 2830fcdce8c4SStefano Zampini THRUSTINTARRAY ii(Ccsr->row_offsets->size()); 2831fcdce8c4SStefano Zampini THRUSTINTARRAY jj(Ccsr->column_indices->size()); 2832fcdce8c4SStefano Zampini ii = *Ccsr->row_offsets; 2833fcdce8c4SStefano Zampini jj = *Ccsr->column_indices; 2834fcdce8c4SStefano Zampini if (ciscompressed) d_i = c->compressedrow.i; 2835fcdce8c4SStefano Zampini cerr = cudaMemcpy(d_i,ii.data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2836fcdce8c4SStefano Zampini cerr = cudaMemcpy(c->j,jj.data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2837fcdce8c4SStefano Zampini } else { 2838fcdce8c4SStefano Zampini PetscInt *d_i = c->i; 2839fcdce8c4SStefano Zampini if (ciscompressed) d_i = c->compressedrow.i; 2840fcdce8c4SStefano Zampini cerr = cudaMemcpy(d_i,Ccsr->row_offsets->data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2841fcdce8c4SStefano Zampini cerr = cudaMemcpy(c->j,Ccsr->column_indices->data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2842fcdce8c4SStefano Zampini } 2843fcdce8c4SStefano Zampini if (ciscompressed) { /* need to expand host row offsets */ 2844fcdce8c4SStefano Zampini PetscInt r = 0; 2845fcdce8c4SStefano Zampini c->i[0] = 0; 2846fcdce8c4SStefano Zampini for (k = 0; k < c->compressedrow.nrows; k++) { 2847fcdce8c4SStefano Zampini const PetscInt next = c->compressedrow.rindex[k]; 2848fcdce8c4SStefano Zampini const PetscInt old = c->compressedrow.i[k]; 2849fcdce8c4SStefano Zampini for (; r < next; r++) c->i[r+1] = old; 2850fcdce8c4SStefano Zampini } 2851fcdce8c4SStefano Zampini for (; r < m; r++) c->i[r+1] = c->compressedrow.i[c->compressedrow.nrows]; 2852fcdce8c4SStefano Zampini } 2853fcdce8c4SStefano Zampini ierr = PetscLogGpuToCpu((Ccsr->column_indices->size() + Ccsr->row_offsets->size())*sizeof(PetscInt));CHKERRQ(ierr); 2854fcdce8c4SStefano Zampini ierr = PetscMalloc1(m,&c->ilen);CHKERRQ(ierr); 2855fcdce8c4SStefano Zampini ierr = PetscMalloc1(m,&c->imax);CHKERRQ(ierr); 2856fcdce8c4SStefano Zampini c->maxnz = c->nz; 2857fcdce8c4SStefano Zampini c->nonzerorowcnt = 0; 2858fcdce8c4SStefano Zampini c->rmax = 0; 2859fcdce8c4SStefano Zampini for (k = 0; k < m; k++) { 2860fcdce8c4SStefano Zampini const PetscInt nn = c->i[k+1] - c->i[k]; 2861fcdce8c4SStefano Zampini c->ilen[k] = c->imax[k] = nn; 2862fcdce8c4SStefano Zampini c->nonzerorowcnt += (PetscInt)!!nn; 2863fcdce8c4SStefano Zampini c->rmax = PetscMax(c->rmax,nn); 2864fcdce8c4SStefano Zampini } 2865fcdce8c4SStefano Zampini ierr = MatMarkDiagonal_SeqAIJ(C);CHKERRQ(ierr); 2866fcdce8c4SStefano Zampini ierr = PetscMalloc1(c->nz,&c->a);CHKERRQ(ierr); 2867fcdce8c4SStefano Zampini Ccsr->num_entries = c->nz; 2868fcdce8c4SStefano Zampini 2869fcdce8c4SStefano Zampini C->nonzerostate++; 2870fcdce8c4SStefano Zampini ierr = PetscLayoutSetUp(C->rmap);CHKERRQ(ierr); 2871fcdce8c4SStefano Zampini ierr = PetscLayoutSetUp(C->cmap);CHKERRQ(ierr); 2872fcdce8c4SStefano Zampini Ccusp->nonzerostate = C->nonzerostate; 2873fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_UNALLOCATED; 2874fcdce8c4SStefano Zampini C->preallocated = PETSC_TRUE; 2875fcdce8c4SStefano Zampini C->assembled = PETSC_FALSE; 2876fcdce8c4SStefano Zampini C->was_assembled = PETSC_FALSE; 2877abb89eb1SStefano Zampini if (product->api_user && A->offloadmask == PETSC_OFFLOAD_BOTH && B->offloadmask == PETSC_OFFLOAD_BOTH) { /* flag the matrix C values as computed, so that the numeric phase will only call MatAssembly */ 2878fcdce8c4SStefano Zampini mmdata->reusesym = PETSC_TRUE; 2879fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_GPU; 2880fcdce8c4SStefano Zampini } 2881fcdce8c4SStefano Zampini C->ops->productnumeric = MatProductNumeric_SeqAIJCUSPARSE_SeqAIJCUSPARSE; 2882fcdce8c4SStefano Zampini PetscFunctionReturn(0); 2883fcdce8c4SStefano Zampini } 2884fcdce8c4SStefano Zampini 2885fcdce8c4SStefano Zampini PETSC_INTERN PetscErrorCode MatProductSetFromOptions_SeqAIJ_SeqDense(Mat); 2886fcdce8c4SStefano Zampini 2887fcdce8c4SStefano Zampini /* handles sparse or dense B */ 2888fcdce8c4SStefano Zampini static PetscErrorCode MatProductSetFromOptions_SeqAIJCUSPARSE(Mat mat) 2889fcdce8c4SStefano Zampini { 2890fcdce8c4SStefano Zampini Mat_Product *product = mat->product; 2891fcdce8c4SStefano Zampini PetscErrorCode ierr; 2892fcdce8c4SStefano Zampini PetscBool isdense = PETSC_FALSE,Biscusp = PETSC_FALSE,Ciscusp = PETSC_TRUE; 2893fcdce8c4SStefano Zampini 2894fcdce8c4SStefano Zampini PetscFunctionBegin; 2895fcdce8c4SStefano Zampini MatCheckProduct(mat,1); 2896fcdce8c4SStefano Zampini ierr = PetscObjectBaseTypeCompare((PetscObject)product->B,MATSEQDENSE,&isdense);CHKERRQ(ierr); 2897abb89eb1SStefano Zampini if (!product->A->boundtocpu && !product->B->boundtocpu) { 2898fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)product->B,MATSEQAIJCUSPARSE,&Biscusp);CHKERRQ(ierr); 2899fcdce8c4SStefano Zampini } 2900fcdce8c4SStefano Zampini if (product->type == MATPRODUCT_ABC) { 2901fcdce8c4SStefano Zampini Ciscusp = PETSC_FALSE; 2902fcdce8c4SStefano Zampini if (!product->C->boundtocpu) { 2903fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)product->C,MATSEQAIJCUSPARSE,&Ciscusp);CHKERRQ(ierr); 2904fcdce8c4SStefano Zampini } 2905fcdce8c4SStefano Zampini } 290665e4b4d4SStefano Zampini if (Biscusp && Ciscusp) { /* we can always select the CPU backend */ 290765e4b4d4SStefano Zampini PetscBool usecpu = PETSC_FALSE; 290865e4b4d4SStefano Zampini switch (product->type) { 290965e4b4d4SStefano Zampini case MATPRODUCT_AB: 291065e4b4d4SStefano Zampini if (product->api_user) { 291165e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatMatMult","Mat");CHKERRQ(ierr); 291265e4b4d4SStefano Zampini ierr = PetscOptionsBool("-matmatmult_backend_cpu","Use CPU code","MatMatMult",usecpu,&usecpu,NULL);CHKERRQ(ierr); 291365e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 291465e4b4d4SStefano Zampini } else { 291565e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatProduct_AB","Mat");CHKERRQ(ierr); 29163e662e0bSHong Zhang ierr = PetscOptionsBool("-mat_product_algorithm_backend_cpu","Use CPU code","MatMatMult",usecpu,&usecpu,NULL);CHKERRQ(ierr); 291765e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 291865e4b4d4SStefano Zampini } 291965e4b4d4SStefano Zampini break; 292065e4b4d4SStefano Zampini case MATPRODUCT_AtB: 292165e4b4d4SStefano Zampini if (product->api_user) { 292265e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatTransposeMatMult","Mat");CHKERRQ(ierr); 292365e4b4d4SStefano Zampini ierr = PetscOptionsBool("-mattransposematmult_backend_cpu","Use CPU code","MatTransposeMatMult",usecpu,&usecpu,NULL);CHKERRQ(ierr); 292465e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 292565e4b4d4SStefano Zampini } else { 292665e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatProduct_AtB","Mat");CHKERRQ(ierr); 29273e662e0bSHong Zhang ierr = PetscOptionsBool("-mat_product_algorithm_backend_cpu","Use CPU code","MatTransposeMatMult",usecpu,&usecpu,NULL);CHKERRQ(ierr); 292865e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 292965e4b4d4SStefano Zampini } 293065e4b4d4SStefano Zampini break; 293165e4b4d4SStefano Zampini case MATPRODUCT_PtAP: 293265e4b4d4SStefano Zampini if (product->api_user) { 293365e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatPtAP","Mat");CHKERRQ(ierr); 293465e4b4d4SStefano Zampini ierr = PetscOptionsBool("-matptap_backend_cpu","Use CPU code","MatPtAP",usecpu,&usecpu,NULL);CHKERRQ(ierr); 293565e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 293665e4b4d4SStefano Zampini } else { 293765e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatProduct_PtAP","Mat");CHKERRQ(ierr); 29383e662e0bSHong Zhang ierr = PetscOptionsBool("-mat_product_algorithm_backend_cpu","Use CPU code","MatPtAP",usecpu,&usecpu,NULL);CHKERRQ(ierr); 293965e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 294065e4b4d4SStefano Zampini } 294165e4b4d4SStefano Zampini break; 294265e4b4d4SStefano Zampini case MATPRODUCT_RARt: 294365e4b4d4SStefano Zampini if (product->api_user) { 294465e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatRARt","Mat");CHKERRQ(ierr); 294565e4b4d4SStefano Zampini ierr = PetscOptionsBool("-matrart_backend_cpu","Use CPU code","MatRARt",usecpu,&usecpu,NULL);CHKERRQ(ierr); 294665e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 294765e4b4d4SStefano Zampini } else { 294865e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatProduct_RARt","Mat");CHKERRQ(ierr); 29493e662e0bSHong Zhang ierr = PetscOptionsBool("-mat_product_algorithm_backend_cpu","Use CPU code","MatRARt",usecpu,&usecpu,NULL);CHKERRQ(ierr); 295065e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 295165e4b4d4SStefano Zampini } 295265e4b4d4SStefano Zampini break; 295365e4b4d4SStefano Zampini case MATPRODUCT_ABC: 295465e4b4d4SStefano Zampini if (product->api_user) { 295565e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatMatMatMult","Mat");CHKERRQ(ierr); 295665e4b4d4SStefano Zampini ierr = PetscOptionsBool("-matmatmatmult_backend_cpu","Use CPU code","MatMatMatMult",usecpu,&usecpu,NULL);CHKERRQ(ierr); 295765e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 295865e4b4d4SStefano Zampini } else { 295965e4b4d4SStefano Zampini ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)mat),((PetscObject)mat)->prefix,"MatProduct_ABC","Mat");CHKERRQ(ierr); 29603e662e0bSHong Zhang ierr = PetscOptionsBool("-mat_product_algorithm_backend_cpu","Use CPU code","MatMatMatMult",usecpu,&usecpu,NULL);CHKERRQ(ierr); 296165e4b4d4SStefano Zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 296265e4b4d4SStefano Zampini } 296365e4b4d4SStefano Zampini break; 296465e4b4d4SStefano Zampini default: 296565e4b4d4SStefano Zampini break; 296665e4b4d4SStefano Zampini } 296765e4b4d4SStefano Zampini if (usecpu) Biscusp = Ciscusp = PETSC_FALSE; 296865e4b4d4SStefano Zampini } 296965e4b4d4SStefano Zampini /* dispatch */ 2970fcdce8c4SStefano Zampini if (isdense) { 2971ccdfe979SStefano Zampini switch (product->type) { 2972ccdfe979SStefano Zampini case MATPRODUCT_AB: 2973ccdfe979SStefano Zampini case MATPRODUCT_AtB: 2974ccdfe979SStefano Zampini case MATPRODUCT_ABt: 2975ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 2976ccdfe979SStefano Zampini case MATPRODUCT_RARt: 2977fcdce8c4SStefano Zampini if (product->A->boundtocpu) { 2978fcdce8c4SStefano Zampini ierr = MatProductSetFromOptions_SeqAIJ_SeqDense(mat);CHKERRQ(ierr); 2979fcdce8c4SStefano Zampini } else { 2980fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_SeqAIJCUSPARSE_SeqDENSECUDA; 2981fcdce8c4SStefano Zampini } 2982fcdce8c4SStefano Zampini break; 2983fcdce8c4SStefano Zampini case MATPRODUCT_ABC: 2984fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_ABC_Basic; 2985fcdce8c4SStefano Zampini break; 2986ccdfe979SStefano Zampini default: 2987ccdfe979SStefano Zampini break; 2988ccdfe979SStefano Zampini } 2989fcdce8c4SStefano Zampini } else if (Biscusp && Ciscusp) { 2990fcdce8c4SStefano Zampini switch (product->type) { 2991fcdce8c4SStefano Zampini case MATPRODUCT_AB: 2992fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 2993fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 2994fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_SeqAIJCUSPARSE_SeqAIJCUSPARSE; 2995fcdce8c4SStefano Zampini break; 2996fcdce8c4SStefano Zampini case MATPRODUCT_PtAP: 2997fcdce8c4SStefano Zampini case MATPRODUCT_RARt: 2998fcdce8c4SStefano Zampini case MATPRODUCT_ABC: 2999fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_ABC_Basic; 3000fcdce8c4SStefano Zampini break; 3001fcdce8c4SStefano Zampini default: 3002fcdce8c4SStefano Zampini break; 3003fcdce8c4SStefano Zampini } 3004fcdce8c4SStefano Zampini } else { /* fallback for AIJ */ 3005fcdce8c4SStefano Zampini ierr = MatProductSetFromOptions_SeqAIJ(mat);CHKERRQ(ierr); 3006fcdce8c4SStefano Zampini } 3007ccdfe979SStefano Zampini PetscFunctionReturn(0); 3008ccdfe979SStefano Zampini } 3009ccdfe979SStefano Zampini 30106fa9248bSJed Brown static PetscErrorCode MatMult_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy) 30119ae82921SPaul Mullowney { 3012b175d8bbSPaul Mullowney PetscErrorCode ierr; 30139ae82921SPaul Mullowney 30149ae82921SPaul Mullowney PetscFunctionBegin; 3015e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,NULL,yy,PETSC_FALSE,PETSC_FALSE);CHKERRQ(ierr); 3016e6e9a74fSStefano Zampini PetscFunctionReturn(0); 3017e6e9a74fSStefano Zampini } 3018e6e9a74fSStefano Zampini 3019e6e9a74fSStefano Zampini static PetscErrorCode MatMultAdd_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy, Vec zz) 3020e6e9a74fSStefano Zampini { 3021e6e9a74fSStefano Zampini PetscErrorCode ierr; 3022e6e9a74fSStefano Zampini 3023e6e9a74fSStefano Zampini PetscFunctionBegin; 3024e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,yy,zz,PETSC_FALSE,PETSC_FALSE);CHKERRQ(ierr); 3025e6e9a74fSStefano Zampini PetscFunctionReturn(0); 3026e6e9a74fSStefano Zampini } 3027e6e9a74fSStefano Zampini 3028e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTranspose_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy) 3029e6e9a74fSStefano Zampini { 3030e6e9a74fSStefano Zampini PetscErrorCode ierr; 3031e6e9a74fSStefano Zampini 3032e6e9a74fSStefano Zampini PetscFunctionBegin; 3033e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,NULL,yy,PETSC_TRUE,PETSC_TRUE);CHKERRQ(ierr); 3034e6e9a74fSStefano Zampini PetscFunctionReturn(0); 3035e6e9a74fSStefano Zampini } 3036e6e9a74fSStefano Zampini 3037e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTransposeAdd_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy,Vec zz) 3038e6e9a74fSStefano Zampini { 3039e6e9a74fSStefano Zampini PetscErrorCode ierr; 3040e6e9a74fSStefano Zampini 3041e6e9a74fSStefano Zampini PetscFunctionBegin; 3042e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,yy,zz,PETSC_TRUE,PETSC_TRUE);CHKERRQ(ierr); 30439ae82921SPaul Mullowney PetscFunctionReturn(0); 30449ae82921SPaul Mullowney } 30459ae82921SPaul Mullowney 30466fa9248bSJed Brown static PetscErrorCode MatMultTranspose_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy) 3047ca45077fSPaul Mullowney { 3048b175d8bbSPaul Mullowney PetscErrorCode ierr; 3049ca45077fSPaul Mullowney 3050ca45077fSPaul Mullowney PetscFunctionBegin; 3051e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,NULL,yy,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr); 3052ca45077fSPaul Mullowney PetscFunctionReturn(0); 3053ca45077fSPaul Mullowney } 3054ca45077fSPaul Mullowney 3055a0e72f99SJunchao Zhang __global__ static void ScatterAdd(PetscInt n, PetscInt *idx,const PetscScalar *x,PetscScalar *y) 3056a0e72f99SJunchao Zhang { 3057a0e72f99SJunchao Zhang int i = blockIdx.x*blockDim.x + threadIdx.x; 3058a0e72f99SJunchao Zhang if (i < n) y[idx[i]] += x[i]; 3059a0e72f99SJunchao Zhang } 3060a0e72f99SJunchao Zhang 3061afb2bd1cSJunchao Zhang /* z = op(A) x + y. If trans & !herm, op = ^T; if trans & herm, op = ^H; if !trans, op = no-op */ 3062e6e9a74fSStefano Zampini static PetscErrorCode MatMultAddKernel_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy,Vec zz,PetscBool trans,PetscBool herm) 30639ae82921SPaul Mullowney { 30649ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 3065aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 30669ff858a8SKarl Rupp Mat_SeqAIJCUSPARSEMultStruct *matstruct; 3067e6e9a74fSStefano Zampini PetscScalar *xarray,*zarray,*dptr,*beta,*xptr; 3068b175d8bbSPaul Mullowney PetscErrorCode ierr; 3069aa372e3fSPaul Mullowney cusparseStatus_t stat; 3070e6e9a74fSStefano Zampini cusparseOperation_t opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 3071e6e9a74fSStefano Zampini PetscBool compressed; 3072afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3073afb2bd1cSJunchao Zhang PetscInt nx,ny; 3074afb2bd1cSJunchao Zhang #endif 30756e111a19SKarl Rupp 30769ae82921SPaul Mullowney PetscFunctionBegin; 30772c71b3e2SJacob Faibussowitsch PetscCheckFalse(herm && !trans,PetscObjectComm((PetscObject)A),PETSC_ERR_GPU,"Hermitian and not transpose not supported"); 3078*cbc6b225SStefano Zampini if (!a->nz) { 3079afb2bd1cSJunchao Zhang if (!yy) {ierr = VecSet_SeqCUDA(zz,0);CHKERRQ(ierr);} 3080d38a13f6SStefano Zampini else {ierr = VecCopy_SeqCUDA(yy,zz);CHKERRQ(ierr);} 3081e6e9a74fSStefano Zampini PetscFunctionReturn(0); 3082e6e9a74fSStefano Zampini } 308334d6c7a5SJose E. Roman /* The line below is necessary due to the operations that modify the matrix on the CPU (axpy, scale, etc) */ 308434d6c7a5SJose E. Roman ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 3085e6e9a74fSStefano Zampini if (!trans) { 30869ff858a8SKarl Rupp matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->mat; 30872c71b3e2SJacob Faibussowitsch PetscCheckFalse(!matstruct,PetscObjectComm((PetscObject)A),PETSC_ERR_GPU,"SeqAIJCUSPARSE does not have a 'mat' (need to fix)"); 3088e6e9a74fSStefano Zampini } else { 30891a2c6b5cSJunchao Zhang if (herm || !A->form_explicit_transpose) { 3090e6e9a74fSStefano Zampini opA = herm ? CUSPARSE_OPERATION_CONJUGATE_TRANSPOSE : CUSPARSE_OPERATION_TRANSPOSE; 3091e6e9a74fSStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->mat; 3092e6e9a74fSStefano Zampini } else { 30933606e59fSJunchao Zhang if (!cusparsestruct->matTranspose) {ierr = MatSeqAIJCUSPARSEFormExplicitTranspose(A);CHKERRQ(ierr);} 3094e6e9a74fSStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->matTranspose; 3095e6e9a74fSStefano Zampini } 3096e6e9a74fSStefano Zampini } 3097e6e9a74fSStefano Zampini /* Does the matrix use compressed rows (i.e., drop zero rows)? */ 3098e6e9a74fSStefano Zampini compressed = matstruct->cprowIndices ? PETSC_TRUE : PETSC_FALSE; 3099213423ffSJunchao Zhang 3100e6e9a74fSStefano Zampini try { 3101e6e9a74fSStefano Zampini ierr = VecCUDAGetArrayRead(xx,(const PetscScalar**)&xarray);CHKERRQ(ierr); 3102213423ffSJunchao Zhang if (yy == zz) {ierr = VecCUDAGetArray(zz,&zarray);CHKERRQ(ierr);} /* read & write zz, so need to get uptodate zarray on GPU */ 3103213423ffSJunchao Zhang else {ierr = VecCUDAGetArrayWrite(zz,&zarray);CHKERRQ(ierr);} /* write zz, so no need to init zarray on GPU */ 3104afb2bd1cSJunchao Zhang 310585ba7357SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3106e6e9a74fSStefano Zampini if (opA == CUSPARSE_OPERATION_NON_TRANSPOSE) { 3107afb2bd1cSJunchao Zhang /* z = A x + beta y. 3108afb2bd1cSJunchao Zhang If A is compressed (with less rows), then Ax is shorter than the full z, so we need a work vector to store Ax. 3109afb2bd1cSJunchao Zhang When A is non-compressed, and z = y, we can set beta=1 to compute y = Ax + y in one call. 3110afb2bd1cSJunchao Zhang */ 3111e6e9a74fSStefano Zampini xptr = xarray; 3112afb2bd1cSJunchao Zhang dptr = compressed ? cusparsestruct->workVector->data().get() : zarray; 3113213423ffSJunchao Zhang beta = (yy == zz && !compressed) ? matstruct->beta_one : matstruct->beta_zero; 3114afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3115afb2bd1cSJunchao Zhang /* Get length of x, y for y=Ax. ny might be shorter than the work vector's allocated length, since the work vector is 3116afb2bd1cSJunchao Zhang allocated to accommodate different uses. So we get the length info directly from mat. 3117afb2bd1cSJunchao Zhang */ 3118afb2bd1cSJunchao Zhang if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 3119afb2bd1cSJunchao Zhang CsrMatrix *mat = (CsrMatrix*)matstruct->mat; 3120afb2bd1cSJunchao Zhang nx = mat->num_cols; 3121afb2bd1cSJunchao Zhang ny = mat->num_rows; 3122afb2bd1cSJunchao Zhang } 3123afb2bd1cSJunchao Zhang #endif 3124e6e9a74fSStefano Zampini } else { 3125afb2bd1cSJunchao Zhang /* z = A^T x + beta y 3126afb2bd1cSJunchao Zhang If A is compressed, then we need a work vector as the shorter version of x to compute A^T x. 3127afb2bd1cSJunchao Zhang Note A^Tx is of full length, so we set beta to 1.0 if y exists. 3128afb2bd1cSJunchao Zhang */ 3129afb2bd1cSJunchao Zhang xptr = compressed ? cusparsestruct->workVector->data().get() : xarray; 3130e6e9a74fSStefano Zampini dptr = zarray; 3131e6e9a74fSStefano Zampini beta = yy ? matstruct->beta_one : matstruct->beta_zero; 3132afb2bd1cSJunchao Zhang if (compressed) { /* Scatter x to work vector */ 3133e6e9a74fSStefano Zampini thrust::device_ptr<PetscScalar> xarr = thrust::device_pointer_cast(xarray); 3134a0e72f99SJunchao Zhang thrust::for_each(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(xarr, matstruct->cprowIndices->begin()))), 3135e6e9a74fSStefano Zampini thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(xarr, matstruct->cprowIndices->begin()))) + matstruct->cprowIndices->size(), 3136e6e9a74fSStefano Zampini VecCUDAEqualsReverse()); 3137e6e9a74fSStefano Zampini } 3138afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3139afb2bd1cSJunchao Zhang if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 3140afb2bd1cSJunchao Zhang CsrMatrix *mat = (CsrMatrix*)matstruct->mat; 3141afb2bd1cSJunchao Zhang nx = mat->num_rows; 3142afb2bd1cSJunchao Zhang ny = mat->num_cols; 3143afb2bd1cSJunchao Zhang } 3144afb2bd1cSJunchao Zhang #endif 3145e6e9a74fSStefano Zampini } 31469ae82921SPaul Mullowney 3147afb2bd1cSJunchao Zhang /* csr_spmv does y = alpha op(A) x + beta y */ 3148aa372e3fSPaul Mullowney if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 3149afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 31502c71b3e2SJacob Faibussowitsch PetscCheckFalse(opA < 0 || opA > 2,PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE ABI on cusparseOperation_t has changed and PETSc has not been updated accordingly"); 3151afb2bd1cSJunchao Zhang if (!matstruct->cuSpMV[opA].initialized) { /* built on demand */ 3152ee7b52eaSHong Zhang cudaError_t cerr; 3153afb2bd1cSJunchao Zhang stat = cusparseCreateDnVec(&matstruct->cuSpMV[opA].vecXDescr,nx,xptr,cusparse_scalartype);CHKERRCUSPARSE(stat); 3154afb2bd1cSJunchao Zhang stat = cusparseCreateDnVec(&matstruct->cuSpMV[opA].vecYDescr,ny,dptr,cusparse_scalartype);CHKERRCUSPARSE(stat); 3155afb2bd1cSJunchao Zhang stat = cusparseSpMV_bufferSize(cusparsestruct->handle, opA, matstruct->alpha_one, 3156afb2bd1cSJunchao Zhang matstruct->matDescr, 3157afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecXDescr, beta, 3158afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecYDescr, 3159afb2bd1cSJunchao Zhang cusparse_scalartype, 3160afb2bd1cSJunchao Zhang cusparsestruct->spmvAlg, 3161afb2bd1cSJunchao Zhang &matstruct->cuSpMV[opA].spmvBufferSize);CHKERRCUSPARSE(stat); 3162afb2bd1cSJunchao Zhang cerr = cudaMalloc(&matstruct->cuSpMV[opA].spmvBuffer,matstruct->cuSpMV[opA].spmvBufferSize);CHKERRCUDA(cerr); 3163afb2bd1cSJunchao Zhang 3164afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].initialized = PETSC_TRUE; 3165afb2bd1cSJunchao Zhang } else { 3166afb2bd1cSJunchao Zhang /* x, y's value pointers might change between calls, but their shape is kept, so we just update pointers */ 3167afb2bd1cSJunchao Zhang stat = cusparseDnVecSetValues(matstruct->cuSpMV[opA].vecXDescr,xptr);CHKERRCUSPARSE(stat); 3168afb2bd1cSJunchao Zhang stat = cusparseDnVecSetValues(matstruct->cuSpMV[opA].vecYDescr,dptr);CHKERRCUSPARSE(stat); 3169afb2bd1cSJunchao Zhang } 3170afb2bd1cSJunchao Zhang 3171afb2bd1cSJunchao Zhang stat = cusparseSpMV(cusparsestruct->handle, opA, 3172afb2bd1cSJunchao Zhang matstruct->alpha_one, 31733606e59fSJunchao Zhang matstruct->matDescr, /* built in MatSeqAIJCUSPARSECopyToGPU() or MatSeqAIJCUSPARSEFormExplicitTranspose() */ 3174afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecXDescr, 3175afb2bd1cSJunchao Zhang beta, 3176afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecYDescr, 3177afb2bd1cSJunchao Zhang cusparse_scalartype, 3178afb2bd1cSJunchao Zhang cusparsestruct->spmvAlg, 3179afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].spmvBuffer);CHKERRCUSPARSE(stat); 3180afb2bd1cSJunchao Zhang #else 31817656d835SStefano Zampini CsrMatrix *mat = (CsrMatrix*)matstruct->mat; 3182e6e9a74fSStefano Zampini stat = cusparse_csr_spmv(cusparsestruct->handle, opA, 3183a65300a6SPaul Mullowney mat->num_rows, mat->num_cols, 3184afb2bd1cSJunchao Zhang mat->num_entries, matstruct->alpha_one, matstruct->descr, 3185aa372e3fSPaul Mullowney mat->values->data().get(), mat->row_offsets->data().get(), 3186e6e9a74fSStefano Zampini mat->column_indices->data().get(), xptr, beta, 318757d48284SJunchao Zhang dptr);CHKERRCUSPARSE(stat); 3188afb2bd1cSJunchao Zhang #endif 3189aa372e3fSPaul Mullowney } else { 3190213423ffSJunchao Zhang if (cusparsestruct->nrows) { 3191afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3192afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 3193afb2bd1cSJunchao Zhang #else 3194301298b4SMark Adams cusparseHybMat_t hybMat = (cusparseHybMat_t)matstruct->mat; 3195e6e9a74fSStefano Zampini stat = cusparse_hyb_spmv(cusparsestruct->handle, opA, 3196afb2bd1cSJunchao Zhang matstruct->alpha_one, matstruct->descr, hybMat, 3197e6e9a74fSStefano Zampini xptr, beta, 319857d48284SJunchao Zhang dptr);CHKERRCUSPARSE(stat); 3199afb2bd1cSJunchao Zhang #endif 3200a65300a6SPaul Mullowney } 3201aa372e3fSPaul Mullowney } 3202958c4211Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3203aa372e3fSPaul Mullowney 3204e6e9a74fSStefano Zampini if (opA == CUSPARSE_OPERATION_NON_TRANSPOSE) { 3205213423ffSJunchao Zhang if (yy) { /* MatMultAdd: zz = A*xx + yy */ 3206213423ffSJunchao Zhang if (compressed) { /* A is compressed. We first copy yy to zz, then ScatterAdd the work vector to zz */ 3207213423ffSJunchao Zhang ierr = VecCopy_SeqCUDA(yy,zz);CHKERRQ(ierr); /* zz = yy */ 3208e6e9a74fSStefano Zampini } else if (zz != yy) { /* A is not compressed. zz already contains A*xx, and we just need to add yy */ 3209213423ffSJunchao Zhang ierr = VecAXPY_SeqCUDA(zz,1.0,yy);CHKERRQ(ierr); /* zz += yy */ 32107656d835SStefano Zampini } 3211213423ffSJunchao Zhang } else if (compressed) { /* MatMult: zz = A*xx. A is compressed, so we zero zz first, then ScatterAdd the work vector to zz */ 3212c1fb3f03SStefano Zampini ierr = VecSet_SeqCUDA(zz,0);CHKERRQ(ierr); 32137656d835SStefano Zampini } 32147656d835SStefano Zampini 3215213423ffSJunchao Zhang /* ScatterAdd the result from work vector into the full vector when A is compressed */ 3216213423ffSJunchao Zhang if (compressed) { 3217e6e9a74fSStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3218a0e72f99SJunchao Zhang /* I wanted to make this for_each asynchronous but failed. thrust::async::for_each() returns an event (internally registerred) 3219a0e72f99SJunchao Zhang and in the destructor of the scope, it will call cudaStreamSynchronize() on this stream. One has to store all events to 3220a0e72f99SJunchao Zhang prevent that. So I just add a ScatterAdd kernel. 3221a0e72f99SJunchao Zhang */ 3222a0e72f99SJunchao Zhang #if 0 3223a0e72f99SJunchao Zhang thrust::device_ptr<PetscScalar> zptr = thrust::device_pointer_cast(zarray); 3224a0e72f99SJunchao Zhang thrust::async::for_each(thrust::cuda::par.on(cusparsestruct->stream), 3225a0e72f99SJunchao Zhang thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(zptr, matstruct->cprowIndices->begin()))), 3226e6e9a74fSStefano Zampini thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(zptr, matstruct->cprowIndices->begin()))) + matstruct->cprowIndices->size(), 3227c41cb2e2SAlejandro Lamas Daviña VecCUDAPlusEquals()); 3228a0e72f99SJunchao Zhang #else 3229a0e72f99SJunchao Zhang PetscInt n = matstruct->cprowIndices->size(); 3230a0e72f99SJunchao Zhang ScatterAdd<<<(n+255)/256,256,0,PetscDefaultCudaStream>>>(n,matstruct->cprowIndices->data().get(),cusparsestruct->workVector->data().get(),zarray); 3231a0e72f99SJunchao Zhang #endif 3232958c4211Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3233e6e9a74fSStefano Zampini } 3234e6e9a74fSStefano Zampini } else { 3235e6e9a74fSStefano Zampini if (yy && yy != zz) { 3236e6e9a74fSStefano Zampini ierr = VecAXPY_SeqCUDA(zz,1.0,yy);CHKERRQ(ierr); /* zz += yy */ 3237e6e9a74fSStefano Zampini } 3238e6e9a74fSStefano Zampini } 3239e6e9a74fSStefano Zampini ierr = VecCUDARestoreArrayRead(xx,(const PetscScalar**)&xarray);CHKERRQ(ierr); 3240213423ffSJunchao Zhang if (yy == zz) {ierr = VecCUDARestoreArray(zz,&zarray);CHKERRQ(ierr);} 3241213423ffSJunchao Zhang else {ierr = VecCUDARestoreArrayWrite(zz,&zarray);CHKERRQ(ierr);} 32429ae82921SPaul Mullowney } catch(char *ex) { 324398921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 32449ae82921SPaul Mullowney } 3245e6e9a74fSStefano Zampini if (yy) { 3246958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*a->nz);CHKERRQ(ierr); 3247e6e9a74fSStefano Zampini } else { 3248e6e9a74fSStefano Zampini ierr = PetscLogGpuFlops(2.0*a->nz-a->nonzerorowcnt);CHKERRQ(ierr); 3249e6e9a74fSStefano Zampini } 32509ae82921SPaul Mullowney PetscFunctionReturn(0); 32519ae82921SPaul Mullowney } 32529ae82921SPaul Mullowney 32536fa9248bSJed Brown static PetscErrorCode MatMultTransposeAdd_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy,Vec zz) 3254ca45077fSPaul Mullowney { 3255b175d8bbSPaul Mullowney PetscErrorCode ierr; 32566e111a19SKarl Rupp 3257ca45077fSPaul Mullowney PetscFunctionBegin; 3258e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,yy,zz,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr); 3259ca45077fSPaul Mullowney PetscFunctionReturn(0); 3260ca45077fSPaul Mullowney } 3261ca45077fSPaul Mullowney 32626fa9248bSJed Brown static PetscErrorCode MatAssemblyEnd_SeqAIJCUSPARSE(Mat A,MatAssemblyType mode) 32639ae82921SPaul Mullowney { 32649ae82921SPaul Mullowney PetscErrorCode ierr; 3265042217e8SBarry Smith PetscObjectState onnz = A->nonzerostate; 3266042217e8SBarry Smith Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 32673fa6b06aSMark Adams 3268042217e8SBarry Smith PetscFunctionBegin; 3269042217e8SBarry Smith ierr = MatAssemblyEnd_SeqAIJ(A,mode);CHKERRQ(ierr); 3270042217e8SBarry Smith if (onnz != A->nonzerostate && cusp->deviceMat) { 3271042217e8SBarry Smith cudaError_t cerr; 3272042217e8SBarry Smith 3273042217e8SBarry Smith ierr = PetscInfo(A,"Destroy device mat since nonzerostate changed\n");CHKERRQ(ierr); 3274042217e8SBarry Smith cerr = cudaFree(cusp->deviceMat);CHKERRCUDA(cerr); 3275042217e8SBarry Smith cusp->deviceMat = NULL; 3276042217e8SBarry Smith } 32779ae82921SPaul Mullowney PetscFunctionReturn(0); 32789ae82921SPaul Mullowney } 32799ae82921SPaul Mullowney 32809ae82921SPaul Mullowney /* --------------------------------------------------------------------------------*/ 3281e057df02SPaul Mullowney /*@ 32829ae82921SPaul Mullowney MatCreateSeqAIJCUSPARSE - Creates a sparse matrix in AIJ (compressed row) format 3283e057df02SPaul Mullowney (the default parallel PETSc format). This matrix will ultimately pushed down 3284e057df02SPaul Mullowney to NVidia GPUs and use the CUSPARSE library for calculations. For good matrix 3285e057df02SPaul Mullowney assembly performance the user should preallocate the matrix storage by setting 3286e057df02SPaul Mullowney the parameter nz (or the array nnz). By setting these parameters accurately, 3287e057df02SPaul Mullowney performance during matrix assembly can be increased by more than a factor of 50. 32889ae82921SPaul Mullowney 3289d083f849SBarry Smith Collective 32909ae82921SPaul Mullowney 32919ae82921SPaul Mullowney Input Parameters: 32929ae82921SPaul Mullowney + comm - MPI communicator, set to PETSC_COMM_SELF 32939ae82921SPaul Mullowney . m - number of rows 32949ae82921SPaul Mullowney . n - number of columns 32959ae82921SPaul Mullowney . nz - number of nonzeros per row (same for all rows) 32969ae82921SPaul Mullowney - nnz - array containing the number of nonzeros in the various rows 32970298fd71SBarry Smith (possibly different for each row) or NULL 32989ae82921SPaul Mullowney 32999ae82921SPaul Mullowney Output Parameter: 33009ae82921SPaul Mullowney . A - the matrix 33019ae82921SPaul Mullowney 33029ae82921SPaul Mullowney It is recommended that one use the MatCreate(), MatSetType() and/or MatSetFromOptions(), 33039ae82921SPaul Mullowney MatXXXXSetPreallocation() paradgm instead of this routine directly. 33049ae82921SPaul Mullowney [MatXXXXSetPreallocation() is, for example, MatSeqAIJSetPreallocation] 33059ae82921SPaul Mullowney 33069ae82921SPaul Mullowney Notes: 33079ae82921SPaul Mullowney If nnz is given then nz is ignored 33089ae82921SPaul Mullowney 33099ae82921SPaul Mullowney The AIJ format (also called the Yale sparse matrix format or 33109ae82921SPaul Mullowney compressed row storage), is fully compatible with standard Fortran 77 33119ae82921SPaul Mullowney storage. That is, the stored row and column indices can begin at 33129ae82921SPaul Mullowney either one (as in Fortran) or zero. See the users' manual for details. 33139ae82921SPaul Mullowney 33149ae82921SPaul Mullowney Specify the preallocated storage with either nz or nnz (not both). 33150298fd71SBarry Smith Set nz=PETSC_DEFAULT and nnz=NULL for PETSc to control dynamic memory 33169ae82921SPaul Mullowney allocation. For large problems you MUST preallocate memory or you 33179ae82921SPaul Mullowney will get TERRIBLE performance, see the users' manual chapter on matrices. 33189ae82921SPaul Mullowney 33199ae82921SPaul Mullowney By default, this format uses inodes (identical nodes) when possible, to 33209ae82921SPaul Mullowney improve numerical efficiency of matrix-vector products and solves. We 33219ae82921SPaul Mullowney search for consecutive rows with the same nonzero structure, thereby 33229ae82921SPaul Mullowney reusing matrix information to achieve increased efficiency. 33239ae82921SPaul Mullowney 33249ae82921SPaul Mullowney Level: intermediate 33259ae82921SPaul Mullowney 3326e057df02SPaul Mullowney .seealso: MatCreate(), MatCreateAIJ(), MatSetValues(), MatSeqAIJSetColumnIndices(), MatCreateSeqAIJWithArrays(), MatCreateAIJ(), MATSEQAIJCUSPARSE, MATAIJCUSPARSE 33279ae82921SPaul Mullowney @*/ 33289ae82921SPaul Mullowney PetscErrorCode MatCreateSeqAIJCUSPARSE(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt nz,const PetscInt nnz[],Mat *A) 33299ae82921SPaul Mullowney { 33309ae82921SPaul Mullowney PetscErrorCode ierr; 33319ae82921SPaul Mullowney 33329ae82921SPaul Mullowney PetscFunctionBegin; 33339ae82921SPaul Mullowney ierr = MatCreate(comm,A);CHKERRQ(ierr); 33349ae82921SPaul Mullowney ierr = MatSetSizes(*A,m,n,m,n);CHKERRQ(ierr); 33359ae82921SPaul Mullowney ierr = MatSetType(*A,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 33369ae82921SPaul Mullowney ierr = MatSeqAIJSetPreallocation_SeqAIJ(*A,nz,(PetscInt*)nnz);CHKERRQ(ierr); 33379ae82921SPaul Mullowney PetscFunctionReturn(0); 33389ae82921SPaul Mullowney } 33399ae82921SPaul Mullowney 33406fa9248bSJed Brown static PetscErrorCode MatDestroy_SeqAIJCUSPARSE(Mat A) 33419ae82921SPaul Mullowney { 33429ae82921SPaul Mullowney PetscErrorCode ierr; 3343ab25e6cbSDominic Meiser 33449ae82921SPaul Mullowney PetscFunctionBegin; 33459ae82921SPaul Mullowney if (A->factortype == MAT_FACTOR_NONE) { 3346470880abSPatrick Sanan ierr = MatSeqAIJCUSPARSE_Destroy((Mat_SeqAIJCUSPARSE**)&A->spptr);CHKERRQ(ierr); 33479ae82921SPaul Mullowney } else { 3348470880abSPatrick Sanan ierr = MatSeqAIJCUSPARSETriFactors_Destroy((Mat_SeqAIJCUSPARSETriFactors**)&A->spptr);CHKERRQ(ierr); 3349aa372e3fSPaul Mullowney } 3350c215019aSStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJCopySubArray_C",NULL);CHKERRQ(ierr); 3351ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatCUSPARSESetFormat_C",NULL);CHKERRQ(ierr); 3352365b711fSMark Adams ierr = PetscObjectComposeFunction((PetscObject)A,"MatCUSPARSESetUseCPUSolve_C",NULL);CHKERRQ(ierr); 3353ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C",NULL);CHKERRQ(ierr); 3354ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdense_C",NULL);CHKERRQ(ierr); 3355fcdce8c4SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C",NULL);CHKERRQ(ierr); 3356ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL);CHKERRQ(ierr); 33577e8381f9SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",NULL);CHKERRQ(ierr); 33587e8381f9SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",NULL);CHKERRQ(ierr); 3359ae48a8d0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatConvert_seqaijcusparse_hypre_C",NULL);CHKERRQ(ierr); 33609ae82921SPaul Mullowney ierr = MatDestroy_SeqAIJ(A);CHKERRQ(ierr); 33619ae82921SPaul Mullowney PetscFunctionReturn(0); 33629ae82921SPaul Mullowney } 33639ae82921SPaul Mullowney 3364ccdfe979SStefano Zampini PETSC_INTERN PetscErrorCode MatConvert_SeqAIJ_SeqAIJCUSPARSE(Mat,MatType,MatReuse,Mat*); 336595639643SRichard Tran Mills static PetscErrorCode MatBindToCPU_SeqAIJCUSPARSE(Mat,PetscBool); 33669ff858a8SKarl Rupp static PetscErrorCode MatDuplicate_SeqAIJCUSPARSE(Mat A,MatDuplicateOption cpvalues,Mat *B) 33679ff858a8SKarl Rupp { 33689ff858a8SKarl Rupp PetscErrorCode ierr; 33699ff858a8SKarl Rupp 33709ff858a8SKarl Rupp PetscFunctionBegin; 33719ff858a8SKarl Rupp ierr = MatDuplicate_SeqAIJ(A,cpvalues,B);CHKERRQ(ierr); 3372ccdfe979SStefano Zampini ierr = MatConvert_SeqAIJ_SeqAIJCUSPARSE(*B,MATSEQAIJCUSPARSE,MAT_INPLACE_MATRIX,B);CHKERRQ(ierr); 33739ff858a8SKarl Rupp PetscFunctionReturn(0); 33749ff858a8SKarl Rupp } 33759ff858a8SKarl Rupp 3376039c6fbaSStefano Zampini static PetscErrorCode MatAXPY_SeqAIJCUSPARSE(Mat Y,PetscScalar a,Mat X,MatStructure str) 337795639643SRichard Tran Mills { 3378e6e9a74fSStefano Zampini PetscErrorCode ierr; 3379a587d139SMark Mat_SeqAIJ *x = (Mat_SeqAIJ*)X->data,*y = (Mat_SeqAIJ*)Y->data; 3380039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cy; 3381039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cx; 3382039c6fbaSStefano Zampini PetscScalar *ay; 3383039c6fbaSStefano Zampini const PetscScalar *ax; 3384039c6fbaSStefano Zampini CsrMatrix *csry,*csrx; 3385e6e9a74fSStefano Zampini 338695639643SRichard Tran Mills PetscFunctionBegin; 3387a49f1ed0SStefano Zampini cy = (Mat_SeqAIJCUSPARSE*)Y->spptr; 3388a49f1ed0SStefano Zampini cx = (Mat_SeqAIJCUSPARSE*)X->spptr; 3389039c6fbaSStefano Zampini if (X->ops->axpy != Y->ops->axpy) { 3390a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(Y,PETSC_FALSE);CHKERRQ(ierr); 3391a587d139SMark ierr = MatAXPY_SeqAIJ(Y,a,X,str);CHKERRQ(ierr); 3392a587d139SMark PetscFunctionReturn(0); 339395639643SRichard Tran Mills } 3394039c6fbaSStefano Zampini /* if we are here, it means both matrices are bound to GPU */ 3395a587d139SMark ierr = MatSeqAIJCUSPARSECopyToGPU(Y);CHKERRQ(ierr); 3396a587d139SMark ierr = MatSeqAIJCUSPARSECopyToGPU(X);CHKERRQ(ierr); 33972c71b3e2SJacob Faibussowitsch PetscCheckFalse(cy->format != MAT_CUSPARSE_CSR,PetscObjectComm((PetscObject)Y),PETSC_ERR_GPU,"only MAT_CUSPARSE_CSR supported"); 33982c71b3e2SJacob Faibussowitsch PetscCheckFalse(cx->format != MAT_CUSPARSE_CSR,PetscObjectComm((PetscObject)X),PETSC_ERR_GPU,"only MAT_CUSPARSE_CSR supported"); 3399039c6fbaSStefano Zampini csry = (CsrMatrix*)cy->mat->mat; 3400039c6fbaSStefano Zampini csrx = (CsrMatrix*)cx->mat->mat; 3401039c6fbaSStefano Zampini /* see if we can turn this into a cublas axpy */ 3402039c6fbaSStefano Zampini if (str != SAME_NONZERO_PATTERN && x->nz == y->nz && !x->compressedrow.use && !y->compressedrow.use) { 3403039c6fbaSStefano Zampini bool eq = thrust::equal(thrust::device,csry->row_offsets->begin(),csry->row_offsets->end(),csrx->row_offsets->begin()); 3404039c6fbaSStefano Zampini if (eq) { 3405039c6fbaSStefano Zampini eq = thrust::equal(thrust::device,csry->column_indices->begin(),csry->column_indices->end(),csrx->column_indices->begin()); 3406039c6fbaSStefano Zampini } 3407039c6fbaSStefano Zampini if (eq) str = SAME_NONZERO_PATTERN; 3408039c6fbaSStefano Zampini } 3409d2be01edSStefano Zampini /* spgeam is buggy with one column */ 3410d2be01edSStefano Zampini if (Y->cmap->n == 1 && str != SAME_NONZERO_PATTERN) str = DIFFERENT_NONZERO_PATTERN; 3411039c6fbaSStefano Zampini 3412039c6fbaSStefano Zampini if (str == SUBSET_NONZERO_PATTERN) { 3413039c6fbaSStefano Zampini cusparseStatus_t stat; 3414039c6fbaSStefano Zampini PetscScalar b = 1.0; 3415039c6fbaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3416039c6fbaSStefano Zampini size_t bufferSize; 3417039c6fbaSStefano Zampini void *buffer; 3418ee7b52eaSHong Zhang cudaError_t cerr; 3419039c6fbaSStefano Zampini #endif 3420039c6fbaSStefano Zampini 3421039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArrayRead(X,&ax);CHKERRQ(ierr); 3422039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArray(Y,&ay);CHKERRQ(ierr); 3423039c6fbaSStefano Zampini stat = cusparseSetPointerMode(cy->handle, CUSPARSE_POINTER_MODE_HOST);CHKERRCUSPARSE(stat); 3424039c6fbaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3425039c6fbaSStefano Zampini stat = cusparse_csr_spgeam_bufferSize(cy->handle,Y->rmap->n,Y->cmap->n, 3426039c6fbaSStefano Zampini &a,cx->mat->descr,x->nz,ax,csrx->row_offsets->data().get(),csrx->column_indices->data().get(), 3427039c6fbaSStefano Zampini &b,cy->mat->descr,y->nz,ay,csry->row_offsets->data().get(),csry->column_indices->data().get(), 3428039c6fbaSStefano Zampini cy->mat->descr, ay,csry->row_offsets->data().get(),csry->column_indices->data().get(),&bufferSize);CHKERRCUSPARSE(stat); 3429039c6fbaSStefano Zampini cerr = cudaMalloc(&buffer,bufferSize);CHKERRCUDA(cerr); 3430039c6fbaSStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3431039c6fbaSStefano Zampini stat = cusparse_csr_spgeam(cy->handle,Y->rmap->n,Y->cmap->n, 3432039c6fbaSStefano Zampini &a,cx->mat->descr,x->nz,ax,csrx->row_offsets->data().get(),csrx->column_indices->data().get(), 3433039c6fbaSStefano Zampini &b,cy->mat->descr,y->nz,ay,csry->row_offsets->data().get(),csry->column_indices->data().get(), 3434039c6fbaSStefano Zampini cy->mat->descr, ay,csry->row_offsets->data().get(),csry->column_indices->data().get(),buffer);CHKERRCUSPARSE(stat); 3435039c6fbaSStefano Zampini ierr = PetscLogGpuFlops(x->nz + y->nz);CHKERRQ(ierr); 3436039c6fbaSStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3437039c6fbaSStefano Zampini cerr = cudaFree(buffer);CHKERRCUDA(cerr); 3438039c6fbaSStefano Zampini #else 3439039c6fbaSStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3440039c6fbaSStefano Zampini stat = cusparse_csr_spgeam(cy->handle,Y->rmap->n,Y->cmap->n, 3441039c6fbaSStefano Zampini &a,cx->mat->descr,x->nz,ax,csrx->row_offsets->data().get(),csrx->column_indices->data().get(), 3442039c6fbaSStefano Zampini &b,cy->mat->descr,y->nz,ay,csry->row_offsets->data().get(),csry->column_indices->data().get(), 3443039c6fbaSStefano Zampini cy->mat->descr, ay,csry->row_offsets->data().get(),csry->column_indices->data().get());CHKERRCUSPARSE(stat); 3444039c6fbaSStefano Zampini ierr = PetscLogGpuFlops(x->nz + y->nz);CHKERRQ(ierr); 3445039c6fbaSStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3446039c6fbaSStefano Zampini #endif 3447039c6fbaSStefano Zampini stat = cusparseSetPointerMode(cy->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 3448039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArrayRead(X,&ax);CHKERRQ(ierr); 3449039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArray(Y,&ay);CHKERRQ(ierr); 3450039c6fbaSStefano Zampini ierr = MatSeqAIJInvalidateDiagonal(Y);CHKERRQ(ierr); 3451039c6fbaSStefano Zampini } else if (str == SAME_NONZERO_PATTERN) { 3452a587d139SMark cublasHandle_t cublasv2handle; 3453039c6fbaSStefano Zampini cublasStatus_t berr; 3454a587d139SMark PetscBLASInt one = 1, bnz = 1; 3455039c6fbaSStefano Zampini 3456039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArrayRead(X,&ax);CHKERRQ(ierr); 3457039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArray(Y,&ay);CHKERRQ(ierr); 3458a587d139SMark ierr = PetscCUBLASGetHandle(&cublasv2handle);CHKERRQ(ierr); 3459a587d139SMark ierr = PetscBLASIntCast(x->nz,&bnz);CHKERRQ(ierr); 3460a587d139SMark ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3461039c6fbaSStefano Zampini berr = cublasXaxpy(cublasv2handle,bnz,&a,ax,one,ay,one);CHKERRCUBLAS(berr); 3462a587d139SMark ierr = PetscLogGpuFlops(2.0*bnz);CHKERRQ(ierr); 3463a587d139SMark ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3464039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArrayRead(X,&ax);CHKERRQ(ierr); 3465039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArray(Y,&ay);CHKERRQ(ierr); 3466a587d139SMark ierr = MatSeqAIJInvalidateDiagonal(Y);CHKERRQ(ierr); 3467039c6fbaSStefano Zampini } else { 3468a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(Y,PETSC_FALSE);CHKERRQ(ierr); 3469d2be01edSStefano Zampini ierr = MatAXPY_SeqAIJ(Y,a,X,str);CHKERRQ(ierr); 3470a587d139SMark } 347195639643SRichard Tran Mills PetscFunctionReturn(0); 347295639643SRichard Tran Mills } 347395639643SRichard Tran Mills 347433c9ba73SStefano Zampini static PetscErrorCode MatScale_SeqAIJCUSPARSE(Mat Y,PetscScalar a) 347533c9ba73SStefano Zampini { 347633c9ba73SStefano Zampini PetscErrorCode ierr; 347733c9ba73SStefano Zampini Mat_SeqAIJ *y = (Mat_SeqAIJ*)Y->data; 347833c9ba73SStefano Zampini PetscScalar *ay; 347933c9ba73SStefano Zampini cublasHandle_t cublasv2handle; 348033c9ba73SStefano Zampini cublasStatus_t berr; 348133c9ba73SStefano Zampini PetscBLASInt one = 1, bnz = 1; 348233c9ba73SStefano Zampini 348333c9ba73SStefano Zampini PetscFunctionBegin; 348433c9ba73SStefano Zampini ierr = MatSeqAIJCUSPARSEGetArray(Y,&ay);CHKERRQ(ierr); 348533c9ba73SStefano Zampini ierr = PetscCUBLASGetHandle(&cublasv2handle);CHKERRQ(ierr); 348633c9ba73SStefano Zampini ierr = PetscBLASIntCast(y->nz,&bnz);CHKERRQ(ierr); 348733c9ba73SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 348833c9ba73SStefano Zampini berr = cublasXscal(cublasv2handle,bnz,&a,ay,one);CHKERRCUBLAS(berr); 348933c9ba73SStefano Zampini ierr = PetscLogGpuFlops(bnz);CHKERRQ(ierr); 349033c9ba73SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 349133c9ba73SStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArray(Y,&ay);CHKERRQ(ierr); 349233c9ba73SStefano Zampini ierr = MatSeqAIJInvalidateDiagonal(Y);CHKERRQ(ierr); 349333c9ba73SStefano Zampini PetscFunctionReturn(0); 349433c9ba73SStefano Zampini } 349533c9ba73SStefano Zampini 34963fa6b06aSMark Adams static PetscErrorCode MatZeroEntries_SeqAIJCUSPARSE(Mat A) 34973fa6b06aSMark Adams { 34983fa6b06aSMark Adams PetscErrorCode ierr; 34997e8381f9SStefano Zampini PetscBool both = PETSC_FALSE; 3500a587d139SMark Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 35017e8381f9SStefano Zampini 35023fa6b06aSMark Adams PetscFunctionBegin; 35033fa6b06aSMark Adams if (A->factortype == MAT_FACTOR_NONE) { 35043fa6b06aSMark Adams Mat_SeqAIJCUSPARSE *spptr = (Mat_SeqAIJCUSPARSE*)A->spptr; 35057e8381f9SStefano Zampini if (spptr->mat) { 35067e8381f9SStefano Zampini CsrMatrix* matrix = (CsrMatrix*)spptr->mat->mat; 35077e8381f9SStefano Zampini if (matrix->values) { 35087e8381f9SStefano Zampini both = PETSC_TRUE; 35097e8381f9SStefano Zampini thrust::fill(thrust::device,matrix->values->begin(),matrix->values->end(),0.); 35107e8381f9SStefano Zampini } 35117e8381f9SStefano Zampini } 35127e8381f9SStefano Zampini if (spptr->matTranspose) { 35137e8381f9SStefano Zampini CsrMatrix* matrix = (CsrMatrix*)spptr->matTranspose->mat; 35147e8381f9SStefano Zampini if (matrix->values) { 35157e8381f9SStefano Zampini thrust::fill(thrust::device,matrix->values->begin(),matrix->values->end(),0.); 35167e8381f9SStefano Zampini } 35177e8381f9SStefano Zampini } 35183fa6b06aSMark Adams } 3519a587d139SMark ierr = PetscArrayzero(a->a,a->i[A->rmap->n]);CHKERRQ(ierr); 3520a587d139SMark ierr = MatSeqAIJInvalidateDiagonal(A);CHKERRQ(ierr); 35217e8381f9SStefano Zampini if (both) A->offloadmask = PETSC_OFFLOAD_BOTH; 3522a587d139SMark else A->offloadmask = PETSC_OFFLOAD_CPU; 35233fa6b06aSMark Adams PetscFunctionReturn(0); 35243fa6b06aSMark Adams } 35253fa6b06aSMark Adams 3526a587d139SMark static PetscErrorCode MatBindToCPU_SeqAIJCUSPARSE(Mat A,PetscBool flg) 3527a587d139SMark { 3528a587d139SMark Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 3529a587d139SMark PetscErrorCode ierr; 3530a587d139SMark 3531a587d139SMark PetscFunctionBegin; 35329a14fc28SStefano Zampini if (A->factortype != MAT_FACTOR_NONE) { 35339a14fc28SStefano Zampini A->boundtocpu = flg; 35349a14fc28SStefano Zampini PetscFunctionReturn(0); 35359a14fc28SStefano Zampini } 3536a587d139SMark if (flg) { 3537a587d139SMark ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 3538a587d139SMark 353933c9ba73SStefano Zampini A->ops->scale = MatScale_SeqAIJ; 3540a587d139SMark A->ops->axpy = MatAXPY_SeqAIJ; 3541a587d139SMark A->ops->zeroentries = MatZeroEntries_SeqAIJ; 3542a587d139SMark A->ops->mult = MatMult_SeqAIJ; 3543a587d139SMark A->ops->multadd = MatMultAdd_SeqAIJ; 3544a587d139SMark A->ops->multtranspose = MatMultTranspose_SeqAIJ; 3545a587d139SMark A->ops->multtransposeadd = MatMultTransposeAdd_SeqAIJ; 3546a587d139SMark A->ops->multhermitiantranspose = NULL; 3547a587d139SMark A->ops->multhermitiantransposeadd = NULL; 3548fcdce8c4SStefano Zampini A->ops->productsetfromoptions = MatProductSetFromOptions_SeqAIJ; 354967a45760SJunchao Zhang ierr = PetscMemzero(a->ops,sizeof(Mat_SeqAIJOps));CHKERRQ(ierr); 3550c215019aSStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJCopySubArray_C",NULL);CHKERRQ(ierr); 3551a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C",NULL);CHKERRQ(ierr); 3552a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdense_C",NULL);CHKERRQ(ierr); 3553a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",NULL);CHKERRQ(ierr); 3554a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",NULL);CHKERRQ(ierr); 3555a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJGetArray_C",MatSeqAIJGetArray_SeqAIJ);CHKERRQ(ierr); 3556fcdce8c4SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C",NULL);CHKERRQ(ierr); 3557a587d139SMark } else { 355833c9ba73SStefano Zampini A->ops->scale = MatScale_SeqAIJCUSPARSE; 3559a587d139SMark A->ops->axpy = MatAXPY_SeqAIJCUSPARSE; 3560a587d139SMark A->ops->zeroentries = MatZeroEntries_SeqAIJCUSPARSE; 3561a587d139SMark A->ops->mult = MatMult_SeqAIJCUSPARSE; 3562a587d139SMark A->ops->multadd = MatMultAdd_SeqAIJCUSPARSE; 3563a587d139SMark A->ops->multtranspose = MatMultTranspose_SeqAIJCUSPARSE; 3564a587d139SMark A->ops->multtransposeadd = MatMultTransposeAdd_SeqAIJCUSPARSE; 3565a587d139SMark A->ops->multhermitiantranspose = MatMultHermitianTranspose_SeqAIJCUSPARSE; 3566a587d139SMark A->ops->multhermitiantransposeadd = MatMultHermitianTransposeAdd_SeqAIJCUSPARSE; 3567fcdce8c4SStefano Zampini A->ops->productsetfromoptions = MatProductSetFromOptions_SeqAIJCUSPARSE; 356867a45760SJunchao Zhang a->ops->getarray = MatSeqAIJGetArray_SeqAIJCUSPARSE; 356967a45760SJunchao Zhang a->ops->restorearray = MatSeqAIJRestoreArray_SeqAIJCUSPARSE; 357067a45760SJunchao Zhang a->ops->getarrayread = MatSeqAIJGetArrayRead_SeqAIJCUSPARSE; 357167a45760SJunchao Zhang a->ops->restorearrayread = MatSeqAIJRestoreArrayRead_SeqAIJCUSPARSE; 357267a45760SJunchao Zhang a->ops->getarraywrite = MatSeqAIJGetArrayWrite_SeqAIJCUSPARSE; 357367a45760SJunchao Zhang a->ops->restorearraywrite = MatSeqAIJRestoreArrayWrite_SeqAIJCUSPARSE; 3574c215019aSStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJCopySubArray_C",MatSeqAIJCopySubArray_SeqAIJCUSPARSE);CHKERRQ(ierr); 3575a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C",MatProductSetFromOptions_SeqAIJCUSPARSE);CHKERRQ(ierr); 3576a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdense_C",MatProductSetFromOptions_SeqAIJCUSPARSE);CHKERRQ(ierr); 3577a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",MatSetPreallocationCOO_SeqAIJCUSPARSE);CHKERRQ(ierr); 3578a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",MatSetValuesCOO_SeqAIJCUSPARSE);CHKERRQ(ierr); 3579fcdce8c4SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C",MatProductSetFromOptions_SeqAIJCUSPARSE);CHKERRQ(ierr); 3580a587d139SMark } 3581a587d139SMark A->boundtocpu = flg; 3582ea500dcfSRichard Tran Mills if (flg && a->inode.size) { 3583ea500dcfSRichard Tran Mills a->inode.use = PETSC_TRUE; 3584ea500dcfSRichard Tran Mills } else { 3585ea500dcfSRichard Tran Mills a->inode.use = PETSC_FALSE; 3586ea500dcfSRichard Tran Mills } 3587a587d139SMark PetscFunctionReturn(0); 3588a587d139SMark } 3589a587d139SMark 359049735bf3SStefano Zampini PETSC_INTERN PetscErrorCode MatConvert_SeqAIJ_SeqAIJCUSPARSE(Mat A, MatType mtype, MatReuse reuse, Mat* newmat) 35919ae82921SPaul Mullowney { 35929ae82921SPaul Mullowney PetscErrorCode ierr; 3593aa372e3fSPaul Mullowney cusparseStatus_t stat; 359449735bf3SStefano Zampini Mat B; 35959ae82921SPaul Mullowney 35969ae82921SPaul Mullowney PetscFunctionBegin; 3597a4af0ceeSJacob Faibussowitsch ierr = PetscDeviceInitialize(PETSC_DEVICE_CUDA);CHKERRQ(ierr); /* first use of CUSPARSE may be via MatConvert */ 359849735bf3SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 359949735bf3SStefano Zampini ierr = MatDuplicate(A,MAT_COPY_VALUES,newmat);CHKERRQ(ierr); 360049735bf3SStefano Zampini } else if (reuse == MAT_REUSE_MATRIX) { 360149735bf3SStefano Zampini ierr = MatCopy(A,*newmat,SAME_NONZERO_PATTERN);CHKERRQ(ierr); 360249735bf3SStefano Zampini } 360349735bf3SStefano Zampini B = *newmat; 360449735bf3SStefano Zampini 360534136279SStefano Zampini ierr = PetscFree(B->defaultvectype);CHKERRQ(ierr); 360634136279SStefano Zampini ierr = PetscStrallocpy(VECCUDA,&B->defaultvectype);CHKERRQ(ierr); 360734136279SStefano Zampini 360849735bf3SStefano Zampini if (reuse != MAT_REUSE_MATRIX && !B->spptr) { 36099ae82921SPaul Mullowney if (B->factortype == MAT_FACTOR_NONE) { 3610e6e9a74fSStefano Zampini Mat_SeqAIJCUSPARSE *spptr; 3611e6e9a74fSStefano Zampini ierr = PetscNew(&spptr);CHKERRQ(ierr); 3612e6e9a74fSStefano Zampini stat = cusparseCreate(&spptr->handle);CHKERRCUSPARSE(stat); 3613a0e72f99SJunchao Zhang stat = cusparseSetStream(spptr->handle,PetscDefaultCudaStream);CHKERRCUSPARSE(stat); 36141a2c6b5cSJunchao Zhang spptr->format = MAT_CUSPARSE_CSR; 3615d8132acaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 36168efa179dSJose E. Roman #if PETSC_PKG_CUDA_VERSION_GE(11,2,0) 3617a435da06SStefano Zampini spptr->spmvAlg = CUSPARSE_SPMV_CSR_ALG1; /* default, since we only support csr */ 3618a435da06SStefano Zampini #else 3619d8132acaSStefano Zampini spptr->spmvAlg = CUSPARSE_CSRMV_ALG1; /* default, since we only support csr */ 3620a435da06SStefano Zampini #endif 3621d8132acaSStefano Zampini spptr->spmmAlg = CUSPARSE_SPMM_CSR_ALG1; /* default, only support column-major dense matrix B */ 3622d8132acaSStefano Zampini spptr->csr2cscAlg = CUSPARSE_CSR2CSC_ALG1; 3623d8132acaSStefano Zampini #endif 36241a2c6b5cSJunchao Zhang B->spptr = spptr; 36259ae82921SPaul Mullowney } else { 3626e6e9a74fSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *spptr; 3627e6e9a74fSStefano Zampini 3628e6e9a74fSStefano Zampini ierr = PetscNew(&spptr);CHKERRQ(ierr); 3629e6e9a74fSStefano Zampini stat = cusparseCreate(&spptr->handle);CHKERRCUSPARSE(stat); 3630a0e72f99SJunchao Zhang stat = cusparseSetStream(spptr->handle,PetscDefaultCudaStream);CHKERRCUSPARSE(stat); 3631e6e9a74fSStefano Zampini B->spptr = spptr; 36329ae82921SPaul Mullowney } 3633e6e9a74fSStefano Zampini B->offloadmask = PETSC_OFFLOAD_UNALLOCATED; 363449735bf3SStefano Zampini } 3635693b0035SStefano Zampini B->ops->assemblyend = MatAssemblyEnd_SeqAIJCUSPARSE; 36369ae82921SPaul Mullowney B->ops->destroy = MatDestroy_SeqAIJCUSPARSE; 36371a2c6b5cSJunchao Zhang B->ops->setoption = MatSetOption_SeqAIJCUSPARSE; 36389ae82921SPaul Mullowney B->ops->setfromoptions = MatSetFromOptions_SeqAIJCUSPARSE; 363995639643SRichard Tran Mills B->ops->bindtocpu = MatBindToCPU_SeqAIJCUSPARSE; 3640693b0035SStefano Zampini B->ops->duplicate = MatDuplicate_SeqAIJCUSPARSE; 36412205254eSKarl Rupp 3642e6e9a74fSStefano Zampini ierr = MatBindToCPU_SeqAIJCUSPARSE(B,PETSC_FALSE);CHKERRQ(ierr); 36439ae82921SPaul Mullowney ierr = PetscObjectChangeTypeName((PetscObject)B,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 3644bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatCUSPARSESetFormat_C",MatCUSPARSESetFormat_SeqAIJCUSPARSE);CHKERRQ(ierr); 3645ae48a8d0SStefano Zampini #if defined(PETSC_HAVE_HYPRE) 3646ae48a8d0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_seqaijcusparse_hypre_C",MatConvert_AIJ_HYPRE);CHKERRQ(ierr); 3647ae48a8d0SStefano Zampini #endif 3648365b711fSMark Adams ierr = PetscObjectComposeFunction((PetscObject)B,"MatCUSPARSESetUseCPUSolve_C",MatCUSPARSESetUseCPUSolve_SeqAIJCUSPARSE);CHKERRQ(ierr); 36499ae82921SPaul Mullowney PetscFunctionReturn(0); 36509ae82921SPaul Mullowney } 36519ae82921SPaul Mullowney 365202fe1965SBarry Smith PETSC_EXTERN PetscErrorCode MatCreate_SeqAIJCUSPARSE(Mat B) 365302fe1965SBarry Smith { 365402fe1965SBarry Smith PetscErrorCode ierr; 365502fe1965SBarry Smith 365602fe1965SBarry Smith PetscFunctionBegin; 365702fe1965SBarry Smith ierr = MatCreate_SeqAIJ(B);CHKERRQ(ierr); 36580ce8acdeSStefano Zampini ierr = MatConvert_SeqAIJ_SeqAIJCUSPARSE(B,MATSEQAIJCUSPARSE,MAT_INPLACE_MATRIX,&B);CHKERRQ(ierr); 365902fe1965SBarry Smith PetscFunctionReturn(0); 366002fe1965SBarry Smith } 366102fe1965SBarry Smith 36623ca39a21SBarry Smith /*MC 3663e057df02SPaul Mullowney MATSEQAIJCUSPARSE - MATAIJCUSPARSE = "(seq)aijcusparse" - A matrix type to be used for sparse matrices. 3664e057df02SPaul Mullowney 3665e057df02SPaul Mullowney A matrix type type whose data resides on Nvidia GPUs. These matrices can be in either 36662692e278SPaul Mullowney CSR, ELL, or Hybrid format. The ELL and HYB formats require CUDA 4.2 or later. 36672692e278SPaul Mullowney All matrix calculations are performed on Nvidia GPUs using the CUSPARSE library. 3668e057df02SPaul Mullowney 3669e057df02SPaul Mullowney Options Database Keys: 3670e057df02SPaul Mullowney + -mat_type aijcusparse - sets the matrix type to "seqaijcusparse" during a call to MatSetFromOptions() 3671aa372e3fSPaul Mullowney . -mat_cusparse_storage_format csr - sets the storage format of matrices (for MatMult and factors in MatSolve) during a call to MatSetFromOptions(). Other options include ell (ellpack) or hyb (hybrid). 3672a2b725a8SWilliam Gropp - -mat_cusparse_mult_storage_format csr - sets the storage format of matrices (for MatMult) during a call to MatSetFromOptions(). Other options include ell (ellpack) or hyb (hybrid). 3673365b711fSMark Adams + -mat_cusparse_use_cpu_solve - Do MatSolve on CPU 3674e057df02SPaul Mullowney 3675e057df02SPaul Mullowney Level: beginner 3676e057df02SPaul Mullowney 36778468deeeSKarl Rupp .seealso: MatCreateSeqAIJCUSPARSE(), MATAIJCUSPARSE, MatCreateAIJCUSPARSE(), MatCUSPARSESetFormat(), MatCUSPARSEStorageFormat, MatCUSPARSEFormatOperation 3678e057df02SPaul Mullowney M*/ 36797f756511SDominic Meiser 3680bddcd29dSMark Adams PETSC_EXTERN PetscErrorCode MatGetFactor_seqaijcusparse_cusparse_band(Mat,MatFactorType,Mat*); 36810f39cd5aSBarry Smith 36823ca39a21SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_CUSPARSE(void) 368342c9c57cSBarry Smith { 368442c9c57cSBarry Smith PetscErrorCode ierr; 368542c9c57cSBarry Smith 368642c9c57cSBarry Smith PetscFunctionBegin; 3687bddcd29dSMark Adams ierr = MatSolverTypeRegister(MATSOLVERCUSPARSEBAND,MATSEQAIJ,MAT_FACTOR_LU,MatGetFactor_seqaijcusparse_cusparse_band);CHKERRQ(ierr); 36883ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_LU,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 36893ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_CHOLESKY,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 36903ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_ILU,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 36913ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_ICC,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 3692bddcd29dSMark Adams 369342c9c57cSBarry Smith PetscFunctionReturn(0); 369442c9c57cSBarry Smith } 369529b38603SBarry Smith 3696*cbc6b225SStefano Zampini static PetscErrorCode MatResetPreallocationCOO_SeqAIJCUSPARSE(Mat mat) 3697*cbc6b225SStefano Zampini { 3698*cbc6b225SStefano Zampini Mat_SeqAIJCUSPARSE* cusp = (Mat_SeqAIJCUSPARSE*)mat->spptr; 3699*cbc6b225SStefano Zampini cudaError_t cerr; 3700*cbc6b225SStefano Zampini 3701*cbc6b225SStefano Zampini PetscFunctionBegin; 3702*cbc6b225SStefano Zampini if (!cusp) PetscFunctionReturn(0); 3703*cbc6b225SStefano Zampini delete cusp->cooPerm; 3704*cbc6b225SStefano Zampini delete cusp->cooPerm_a; 3705*cbc6b225SStefano Zampini cusp->cooPerm = NULL; 3706*cbc6b225SStefano Zampini cusp->cooPerm_a = NULL; 3707*cbc6b225SStefano Zampini if (cusp->use_extended_coo) { 3708*cbc6b225SStefano Zampini cerr = cudaFree(cusp->jmap_d);CHKERRCUDA(cerr); 3709*cbc6b225SStefano Zampini cerr = cudaFree(cusp->perm_d);CHKERRCUDA(cerr); 3710*cbc6b225SStefano Zampini } 3711*cbc6b225SStefano Zampini cusp->use_extended_coo = PETSC_FALSE; 3712*cbc6b225SStefano Zampini PetscFunctionReturn(0); 3713*cbc6b225SStefano Zampini } 3714*cbc6b225SStefano Zampini 3715470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSE_Destroy(Mat_SeqAIJCUSPARSE **cusparsestruct) 37167f756511SDominic Meiser { 3717e6e9a74fSStefano Zampini PetscErrorCode ierr; 37187f756511SDominic Meiser cusparseStatus_t stat; 3719219fbbafSJunchao Zhang cudaError_t cerr; 37207f756511SDominic Meiser 37217f756511SDominic Meiser PetscFunctionBegin; 37227f756511SDominic Meiser if (*cusparsestruct) { 3723e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*cusparsestruct)->mat,(*cusparsestruct)->format);CHKERRQ(ierr); 3724e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*cusparsestruct)->matTranspose,(*cusparsestruct)->format);CHKERRQ(ierr); 37257f756511SDominic Meiser delete (*cusparsestruct)->workVector; 372681902715SJunchao Zhang delete (*cusparsestruct)->rowoffsets_gpu; 37277e8381f9SStefano Zampini delete (*cusparsestruct)->cooPerm; 37287e8381f9SStefano Zampini delete (*cusparsestruct)->cooPerm_a; 3729a49f1ed0SStefano Zampini delete (*cusparsestruct)->csr2csc_i; 37307e8381f9SStefano Zampini if ((*cusparsestruct)->handle) { stat = cusparseDestroy((*cusparsestruct)->handle);CHKERRCUSPARSE(stat); } 3731*cbc6b225SStefano Zampini if ((*cusparsestruct)->jmap_d) { cerr = cudaFree((*cusparsestruct)->jmap_d);CHKERRCUDA(cerr); } 3732*cbc6b225SStefano Zampini if ((*cusparsestruct)->perm_d) { cerr = cudaFree((*cusparsestruct)->perm_d);CHKERRCUDA(cerr); } 3733e6e9a74fSStefano Zampini ierr = PetscFree(*cusparsestruct);CHKERRQ(ierr); 37347f756511SDominic Meiser } 37357f756511SDominic Meiser PetscFunctionReturn(0); 37367f756511SDominic Meiser } 37377f756511SDominic Meiser 37387f756511SDominic Meiser static PetscErrorCode CsrMatrix_Destroy(CsrMatrix **mat) 37397f756511SDominic Meiser { 37407f756511SDominic Meiser PetscFunctionBegin; 37417f756511SDominic Meiser if (*mat) { 37427f756511SDominic Meiser delete (*mat)->values; 37437f756511SDominic Meiser delete (*mat)->column_indices; 37447f756511SDominic Meiser delete (*mat)->row_offsets; 37457f756511SDominic Meiser delete *mat; 37467f756511SDominic Meiser *mat = 0; 37477f756511SDominic Meiser } 37487f756511SDominic Meiser PetscFunctionReturn(0); 37497f756511SDominic Meiser } 37507f756511SDominic Meiser 3751470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSETriFactorStruct **trifactor) 37527f756511SDominic Meiser { 37537f756511SDominic Meiser cusparseStatus_t stat; 37547f756511SDominic Meiser PetscErrorCode ierr; 37557f756511SDominic Meiser 37567f756511SDominic Meiser PetscFunctionBegin; 37577f756511SDominic Meiser if (*trifactor) { 375857d48284SJunchao Zhang if ((*trifactor)->descr) { stat = cusparseDestroyMatDescr((*trifactor)->descr);CHKERRCUSPARSE(stat); } 3759afb2bd1cSJunchao Zhang if ((*trifactor)->solveInfo) { stat = cusparse_destroy_analysis_info((*trifactor)->solveInfo);CHKERRCUSPARSE(stat); } 37607f756511SDominic Meiser ierr = CsrMatrix_Destroy(&(*trifactor)->csrMat);CHKERRQ(ierr); 37611b0a6780SStefano Zampini if ((*trifactor)->solveBuffer) {cudaError_t cerr = cudaFree((*trifactor)->solveBuffer);CHKERRCUDA(cerr);} 37622cbc15d9SMark if ((*trifactor)->AA_h) {cudaError_t cerr = cudaFreeHost((*trifactor)->AA_h);CHKERRCUDA(cerr);} 3763afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 37641b0a6780SStefano Zampini if ((*trifactor)->csr2cscBuffer) {cudaError_t cerr = cudaFree((*trifactor)->csr2cscBuffer);CHKERRCUDA(cerr);} 3765afb2bd1cSJunchao Zhang #endif 3766da79fbbcSStefano Zampini ierr = PetscFree(*trifactor);CHKERRQ(ierr); 37677f756511SDominic Meiser } 37687f756511SDominic Meiser PetscFunctionReturn(0); 37697f756511SDominic Meiser } 37707f756511SDominic Meiser 3771470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSEMultStruct **matstruct,MatCUSPARSEStorageFormat format) 37727f756511SDominic Meiser { 37737f756511SDominic Meiser CsrMatrix *mat; 37747f756511SDominic Meiser cusparseStatus_t stat; 37757f756511SDominic Meiser cudaError_t err; 37767f756511SDominic Meiser 37777f756511SDominic Meiser PetscFunctionBegin; 37787f756511SDominic Meiser if (*matstruct) { 37797f756511SDominic Meiser if ((*matstruct)->mat) { 37807f756511SDominic Meiser if (format==MAT_CUSPARSE_ELL || format==MAT_CUSPARSE_HYB) { 3781afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3782afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 3783afb2bd1cSJunchao Zhang #else 37847f756511SDominic Meiser cusparseHybMat_t hybMat = (cusparseHybMat_t)(*matstruct)->mat; 378557d48284SJunchao Zhang stat = cusparseDestroyHybMat(hybMat);CHKERRCUSPARSE(stat); 3786afb2bd1cSJunchao Zhang #endif 37877f756511SDominic Meiser } else { 37887f756511SDominic Meiser mat = (CsrMatrix*)(*matstruct)->mat; 37897f756511SDominic Meiser CsrMatrix_Destroy(&mat); 37907f756511SDominic Meiser } 37917f756511SDominic Meiser } 379257d48284SJunchao Zhang if ((*matstruct)->descr) { stat = cusparseDestroyMatDescr((*matstruct)->descr);CHKERRCUSPARSE(stat); } 37937f756511SDominic Meiser delete (*matstruct)->cprowIndices; 3794afb2bd1cSJunchao Zhang if ((*matstruct)->alpha_one) { err=cudaFree((*matstruct)->alpha_one);CHKERRCUDA(err); } 37957656d835SStefano Zampini if ((*matstruct)->beta_zero) { err=cudaFree((*matstruct)->beta_zero);CHKERRCUDA(err); } 37967656d835SStefano Zampini if ((*matstruct)->beta_one) { err=cudaFree((*matstruct)->beta_one);CHKERRCUDA(err); } 3797afb2bd1cSJunchao Zhang 3798afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3799afb2bd1cSJunchao Zhang Mat_SeqAIJCUSPARSEMultStruct *mdata = *matstruct; 3800afb2bd1cSJunchao Zhang if (mdata->matDescr) {stat = cusparseDestroySpMat(mdata->matDescr);CHKERRCUSPARSE(stat);} 3801afb2bd1cSJunchao Zhang for (int i=0; i<3; i++) { 3802afb2bd1cSJunchao Zhang if (mdata->cuSpMV[i].initialized) { 3803afb2bd1cSJunchao Zhang err = cudaFree(mdata->cuSpMV[i].spmvBuffer);CHKERRCUDA(err); 3804afb2bd1cSJunchao Zhang stat = cusparseDestroyDnVec(mdata->cuSpMV[i].vecXDescr);CHKERRCUSPARSE(stat); 3805afb2bd1cSJunchao Zhang stat = cusparseDestroyDnVec(mdata->cuSpMV[i].vecYDescr);CHKERRCUSPARSE(stat); 3806afb2bd1cSJunchao Zhang } 3807afb2bd1cSJunchao Zhang } 3808afb2bd1cSJunchao Zhang #endif 38097f756511SDominic Meiser delete *matstruct; 38107e8381f9SStefano Zampini *matstruct = NULL; 38117f756511SDominic Meiser } 38127f756511SDominic Meiser PetscFunctionReturn(0); 38137f756511SDominic Meiser } 38147f756511SDominic Meiser 3815e8d2b73aSMark Adams PetscErrorCode MatSeqAIJCUSPARSETriFactors_Reset(Mat_SeqAIJCUSPARSETriFactors_p* trifactors) 38167f756511SDominic Meiser { 3817e6e9a74fSStefano Zampini PetscErrorCode ierr; 3818e6e9a74fSStefano Zampini 38197f756511SDominic Meiser PetscFunctionBegin; 38207f756511SDominic Meiser if (*trifactors) { 3821e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->loTriFactorPtr);CHKERRQ(ierr); 3822e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->upTriFactorPtr);CHKERRQ(ierr); 3823e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->loTriFactorPtrTranspose);CHKERRQ(ierr); 3824e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->upTriFactorPtrTranspose);CHKERRQ(ierr); 38257f756511SDominic Meiser delete (*trifactors)->rpermIndices; 38267f756511SDominic Meiser delete (*trifactors)->cpermIndices; 38277f756511SDominic Meiser delete (*trifactors)->workVector; 38287e8381f9SStefano Zampini (*trifactors)->rpermIndices = NULL; 38297e8381f9SStefano Zampini (*trifactors)->cpermIndices = NULL; 38307e8381f9SStefano Zampini (*trifactors)->workVector = NULL; 3831bddcd29dSMark Adams if ((*trifactors)->a_band_d) {cudaError_t cerr = cudaFree((*trifactors)->a_band_d);CHKERRCUDA(cerr);} 3832bddcd29dSMark Adams if ((*trifactors)->i_band_d) {cudaError_t cerr = cudaFree((*trifactors)->i_band_d);CHKERRCUDA(cerr);} 3833e8d2b73aSMark Adams (*trifactors)->init_dev_prop = PETSC_FALSE; 3834ccdfe979SStefano Zampini } 3835ccdfe979SStefano Zampini PetscFunctionReturn(0); 3836ccdfe979SStefano Zampini } 3837ccdfe979SStefano Zampini 3838ccdfe979SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSETriFactors_Destroy(Mat_SeqAIJCUSPARSETriFactors** trifactors) 3839ccdfe979SStefano Zampini { 3840e6e9a74fSStefano Zampini PetscErrorCode ierr; 3841ccdfe979SStefano Zampini cusparseHandle_t handle; 3842ccdfe979SStefano Zampini cusparseStatus_t stat; 3843ccdfe979SStefano Zampini 3844ccdfe979SStefano Zampini PetscFunctionBegin; 3845ccdfe979SStefano Zampini if (*trifactors) { 3846e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(trifactors);CHKERRQ(ierr); 38477f756511SDominic Meiser if (handle = (*trifactors)->handle) { 384857d48284SJunchao Zhang stat = cusparseDestroy(handle);CHKERRCUSPARSE(stat); 38497f756511SDominic Meiser } 3850e6e9a74fSStefano Zampini ierr = PetscFree(*trifactors);CHKERRQ(ierr); 38517f756511SDominic Meiser } 38527f756511SDominic Meiser PetscFunctionReturn(0); 38537f756511SDominic Meiser } 38547e8381f9SStefano Zampini 38557e8381f9SStefano Zampini struct IJCompare 38567e8381f9SStefano Zampini { 38577e8381f9SStefano Zampini __host__ __device__ 38587e8381f9SStefano Zampini inline bool operator() (const thrust::tuple<PetscInt, PetscInt> &t1, const thrust::tuple<PetscInt, PetscInt> &t2) 38597e8381f9SStefano Zampini { 38607e8381f9SStefano Zampini if (t1.get<0>() < t2.get<0>()) return true; 38617e8381f9SStefano Zampini if (t1.get<0>() == t2.get<0>()) return t1.get<1>() < t2.get<1>(); 38627e8381f9SStefano Zampini return false; 38637e8381f9SStefano Zampini } 38647e8381f9SStefano Zampini }; 38657e8381f9SStefano Zampini 38667e8381f9SStefano Zampini struct IJEqual 38677e8381f9SStefano Zampini { 38687e8381f9SStefano Zampini __host__ __device__ 38697e8381f9SStefano Zampini inline bool operator() (const thrust::tuple<PetscInt, PetscInt> &t1, const thrust::tuple<PetscInt, PetscInt> &t2) 38707e8381f9SStefano Zampini { 38717e8381f9SStefano Zampini if (t1.get<0>() != t2.get<0>() || t1.get<1>() != t2.get<1>()) return false; 38727e8381f9SStefano Zampini return true; 38737e8381f9SStefano Zampini } 38747e8381f9SStefano Zampini }; 38757e8381f9SStefano Zampini 38767e8381f9SStefano Zampini struct IJDiff 38777e8381f9SStefano Zampini { 38787e8381f9SStefano Zampini __host__ __device__ 38797e8381f9SStefano Zampini inline PetscInt operator() (const PetscInt &t1, const PetscInt &t2) 38807e8381f9SStefano Zampini { 38817e8381f9SStefano Zampini return t1 == t2 ? 0 : 1; 38827e8381f9SStefano Zampini } 38837e8381f9SStefano Zampini }; 38847e8381f9SStefano Zampini 38857e8381f9SStefano Zampini struct IJSum 38867e8381f9SStefano Zampini { 38877e8381f9SStefano Zampini __host__ __device__ 38887e8381f9SStefano Zampini inline PetscInt operator() (const PetscInt &t1, const PetscInt &t2) 38897e8381f9SStefano Zampini { 38907e8381f9SStefano Zampini return t1||t2; 38917e8381f9SStefano Zampini } 38927e8381f9SStefano Zampini }; 38937e8381f9SStefano Zampini 38947e8381f9SStefano Zampini #include <thrust/iterator/discard_iterator.h> 3895219fbbafSJunchao Zhang /* Associated with MatSetPreallocationCOO_SeqAIJCUSPARSE_Basic() */ 3896219fbbafSJunchao Zhang PetscErrorCode MatSetValuesCOO_SeqAIJCUSPARSE_Basic(Mat A, const PetscScalar v[], InsertMode imode) 38977e8381f9SStefano Zampini { 38987e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3899fcdce8c4SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 3900bfcc3627SStefano Zampini THRUSTARRAY *cooPerm_v = NULL; 390108391a17SStefano Zampini thrust::device_ptr<const PetscScalar> d_v; 39027e8381f9SStefano Zampini CsrMatrix *matrix; 39037e8381f9SStefano Zampini PetscErrorCode ierr; 39047e8381f9SStefano Zampini PetscInt n; 39057e8381f9SStefano Zampini 39067e8381f9SStefano Zampini PetscFunctionBegin; 39072c71b3e2SJacob Faibussowitsch PetscCheckFalse(!cusp,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUSPARSE struct"); 39082c71b3e2SJacob Faibussowitsch PetscCheckFalse(!cusp->mat,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUSPARSE CsrMatrix"); 39097e8381f9SStefano Zampini if (!cusp->cooPerm) { 39107e8381f9SStefano Zampini ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 39117e8381f9SStefano Zampini ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 39127e8381f9SStefano Zampini PetscFunctionReturn(0); 39137e8381f9SStefano Zampini } 39147e8381f9SStefano Zampini matrix = (CsrMatrix*)cusp->mat->mat; 39152c71b3e2SJacob Faibussowitsch PetscCheckFalse(!matrix->values,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 3916e61fc153SStefano Zampini if (!v) { 3917e61fc153SStefano Zampini if (imode == INSERT_VALUES) thrust::fill(thrust::device,matrix->values->begin(),matrix->values->end(),0.); 3918e61fc153SStefano Zampini goto finalize; 39197e8381f9SStefano Zampini } 3920e61fc153SStefano Zampini n = cusp->cooPerm->size(); 392108391a17SStefano Zampini if (isCudaMem(v)) { 392208391a17SStefano Zampini d_v = thrust::device_pointer_cast(v); 392308391a17SStefano Zampini } else { 3924e61fc153SStefano Zampini cooPerm_v = new THRUSTARRAY(n); 3925e61fc153SStefano Zampini cooPerm_v->assign(v,v+n); 392608391a17SStefano Zampini d_v = cooPerm_v->data(); 3927e61fc153SStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscScalar));CHKERRQ(ierr); 392808391a17SStefano Zampini } 3929bfcc3627SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3930e61fc153SStefano Zampini if (imode == ADD_VALUES) { /* ADD VALUES means add to existing ones */ 3931ddea5d60SJunchao Zhang if (cusp->cooPerm_a) { /* there are repeated entries in d_v[], and we need to add these them */ 3932bfcc3627SStefano Zampini THRUSTARRAY *cooPerm_w = new THRUSTARRAY(matrix->values->size()); 393308391a17SStefano Zampini auto vbit = thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()); 3934ddea5d60SJunchao Zhang /* thrust::reduce_by_key(keys_first,keys_last,values_first,keys_output,values_output) 3935ddea5d60SJunchao Zhang cooPerm_a = [0,0,1,2,3,4]. The length is n, number of nonozeros in d_v[]. 3936ddea5d60SJunchao Zhang cooPerm_a is ordered. d_v[i] is the cooPerm_a[i]-th unique nonzero. 3937ddea5d60SJunchao Zhang */ 3938e61fc153SStefano Zampini thrust::reduce_by_key(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),vbit,thrust::make_discard_iterator(),cooPerm_w->begin(),thrust::equal_to<PetscInt>(),thrust::plus<PetscScalar>()); 3939e61fc153SStefano Zampini thrust::transform(cooPerm_w->begin(),cooPerm_w->end(),matrix->values->begin(),matrix->values->begin(),thrust::plus<PetscScalar>()); 3940e61fc153SStefano Zampini delete cooPerm_w; 39417e8381f9SStefano Zampini } else { 3942ddea5d60SJunchao Zhang /* all nonzeros in d_v[] are unique entries */ 394308391a17SStefano Zampini auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()), 39447e8381f9SStefano Zampini matrix->values->begin())); 394508391a17SStefano Zampini auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->end()), 39467e8381f9SStefano Zampini matrix->values->end())); 3947ddea5d60SJunchao Zhang thrust::for_each(zibit,zieit,VecCUDAPlusEquals()); /* values[i] += d_v[cooPerm[i]] */ 39487e8381f9SStefano Zampini } 39497e8381f9SStefano Zampini } else { 3950e61fc153SStefano Zampini if (cusp->cooPerm_a) { /* repeated entries in COO, with INSERT_VALUES -> reduce */ 395108391a17SStefano Zampini auto vbit = thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()); 3952e61fc153SStefano Zampini thrust::reduce_by_key(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),vbit,thrust::make_discard_iterator(),matrix->values->begin(),thrust::equal_to<PetscInt>(),thrust::plus<PetscScalar>()); 39537e8381f9SStefano Zampini } else { 395408391a17SStefano Zampini auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()), 39557e8381f9SStefano Zampini matrix->values->begin())); 395608391a17SStefano Zampini auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->end()), 39577e8381f9SStefano Zampini matrix->values->end())); 39587e8381f9SStefano Zampini thrust::for_each(zibit,zieit,VecCUDAEquals()); 39597e8381f9SStefano Zampini } 39607e8381f9SStefano Zampini } 3961bfcc3627SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3962e61fc153SStefano Zampini finalize: 3963e61fc153SStefano Zampini delete cooPerm_v; 39647e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 3965e61fc153SStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr); 3966fcdce8c4SStefano Zampini /* shorter version of MatAssemblyEnd_SeqAIJ */ 39677d3de750SJacob Faibussowitsch ierr = PetscInfo(A,"Matrix size: %" PetscInt_FMT " X %" PetscInt_FMT "; storage space: 0 unneeded,%" PetscInt_FMT " used\n",A->rmap->n,A->cmap->n,a->nz);CHKERRQ(ierr); 3968fcdce8c4SStefano Zampini ierr = PetscInfo(A,"Number of mallocs during MatSetValues() is 0\n");CHKERRQ(ierr); 39697d3de750SJacob Faibussowitsch ierr = PetscInfo(A,"Maximum nonzeros in any row is %" PetscInt_FMT "\n",a->rmax);CHKERRQ(ierr); 3970fcdce8c4SStefano Zampini a->reallocs = 0; 3971fcdce8c4SStefano Zampini A->info.mallocs += 0; 3972fcdce8c4SStefano Zampini A->info.nz_unneeded = 0; 3973fcdce8c4SStefano Zampini A->assembled = A->was_assembled = PETSC_TRUE; 3974fcdce8c4SStefano Zampini A->num_ass++; 39757e8381f9SStefano Zampini PetscFunctionReturn(0); 39767e8381f9SStefano Zampini } 39777e8381f9SStefano Zampini 3978a49f1ed0SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEInvalidateTranspose(Mat A, PetscBool destroy) 3979a49f1ed0SStefano Zampini { 3980a49f1ed0SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3981a49f1ed0SStefano Zampini PetscErrorCode ierr; 3982a49f1ed0SStefano Zampini 3983a49f1ed0SStefano Zampini PetscFunctionBegin; 3984a49f1ed0SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3985a49f1ed0SStefano Zampini if (!cusp) PetscFunctionReturn(0); 3986a49f1ed0SStefano Zampini if (destroy) { 3987a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&cusp->matTranspose,cusp->format);CHKERRQ(ierr); 3988a49f1ed0SStefano Zampini delete cusp->csr2csc_i; 3989a49f1ed0SStefano Zampini cusp->csr2csc_i = NULL; 3990a49f1ed0SStefano Zampini } 39911a2c6b5cSJunchao Zhang A->transupdated = PETSC_FALSE; 3992a49f1ed0SStefano Zampini PetscFunctionReturn(0); 3993a49f1ed0SStefano Zampini } 3994a49f1ed0SStefano Zampini 39957e8381f9SStefano Zampini #include <thrust/binary_search.h> 3996219fbbafSJunchao Zhang /* 'Basic' means it only works when coo_i[] and coo_j[] do not contain negative indices */ 3997219fbbafSJunchao Zhang PetscErrorCode MatSetPreallocationCOO_SeqAIJCUSPARSE_Basic(Mat A, PetscCount n, const PetscInt coo_i[], const PetscInt coo_j[]) 39987e8381f9SStefano Zampini { 39997e8381f9SStefano Zampini PetscErrorCode ierr; 40007e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 40017e8381f9SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 40027e8381f9SStefano Zampini PetscInt cooPerm_n, nzr = 0; 40037e8381f9SStefano Zampini cudaError_t cerr; 40047e8381f9SStefano Zampini 40057e8381f9SStefano Zampini PetscFunctionBegin; 40067e8381f9SStefano Zampini ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr); 40077e8381f9SStefano Zampini ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr); 40087e8381f9SStefano Zampini cooPerm_n = cusp->cooPerm ? cusp->cooPerm->size() : 0; 40097e8381f9SStefano Zampini if (n != cooPerm_n) { 40107e8381f9SStefano Zampini delete cusp->cooPerm; 40117e8381f9SStefano Zampini delete cusp->cooPerm_a; 40127e8381f9SStefano Zampini cusp->cooPerm = NULL; 40137e8381f9SStefano Zampini cusp->cooPerm_a = NULL; 40147e8381f9SStefano Zampini } 40157e8381f9SStefano Zampini if (n) { 40167e8381f9SStefano Zampini THRUSTINTARRAY d_i(n); 40177e8381f9SStefano Zampini THRUSTINTARRAY d_j(n); 40187e8381f9SStefano Zampini THRUSTINTARRAY ii(A->rmap->n); 40197e8381f9SStefano Zampini 40207e8381f9SStefano Zampini if (!cusp->cooPerm) { cusp->cooPerm = new THRUSTINTARRAY(n); } 40217e8381f9SStefano Zampini if (!cusp->cooPerm_a) { cusp->cooPerm_a = new THRUSTINTARRAY(n); } 40227e8381f9SStefano Zampini 40237e8381f9SStefano Zampini ierr = PetscLogCpuToGpu(2.*n*sizeof(PetscInt));CHKERRQ(ierr); 40247e8381f9SStefano Zampini d_i.assign(coo_i,coo_i+n); 40257e8381f9SStefano Zampini d_j.assign(coo_j,coo_j+n); 4026ddea5d60SJunchao Zhang 4027ddea5d60SJunchao Zhang /* Ex. 4028ddea5d60SJunchao Zhang n = 6 4029ddea5d60SJunchao Zhang coo_i = [3,3,1,4,1,4] 4030ddea5d60SJunchao Zhang coo_j = [3,2,2,5,2,6] 4031ddea5d60SJunchao Zhang */ 40327e8381f9SStefano Zampini auto fkey = thrust::make_zip_iterator(thrust::make_tuple(d_i.begin(),d_j.begin())); 40337e8381f9SStefano Zampini auto ekey = thrust::make_zip_iterator(thrust::make_tuple(d_i.end(),d_j.end())); 40347e8381f9SStefano Zampini 403508391a17SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 40367e8381f9SStefano Zampini thrust::sequence(thrust::device, cusp->cooPerm->begin(), cusp->cooPerm->end(), 0); 4037ddea5d60SJunchao Zhang thrust::sort_by_key(fkey, ekey, cusp->cooPerm->begin(), IJCompare()); /* sort by row, then by col */ 4038ddea5d60SJunchao Zhang *cusp->cooPerm_a = d_i; /* copy the sorted array */ 40397e8381f9SStefano Zampini THRUSTINTARRAY w = d_j; 40407e8381f9SStefano Zampini 4041ddea5d60SJunchao Zhang /* 4042ddea5d60SJunchao Zhang d_i = [1,1,3,3,4,4] 4043ddea5d60SJunchao Zhang d_j = [2,2,2,3,5,6] 4044ddea5d60SJunchao Zhang cooPerm = [2,4,1,0,3,5] 4045ddea5d60SJunchao Zhang */ 4046ddea5d60SJunchao Zhang auto nekey = thrust::unique(fkey, ekey, IJEqual()); /* unique (d_i, d_j) */ 4047ddea5d60SJunchao Zhang 4048ddea5d60SJunchao Zhang /* 4049ddea5d60SJunchao Zhang d_i = [1,3,3,4,4,x] 4050ddea5d60SJunchao Zhang ^ekey 4051ddea5d60SJunchao Zhang d_j = [2,2,3,5,6,x] 4052ddea5d60SJunchao Zhang ^nekye 4053ddea5d60SJunchao Zhang */ 40547e8381f9SStefano Zampini if (nekey == ekey) { /* all entries are unique */ 40557e8381f9SStefano Zampini delete cusp->cooPerm_a; 40567e8381f9SStefano Zampini cusp->cooPerm_a = NULL; 4057ddea5d60SJunchao Zhang } else { /* Stefano: I couldn't come up with a more elegant algorithm */ 4058ddea5d60SJunchao Zhang /* idea: any change in i or j in the (i,j) sequence implies a new nonzero */ 4059ddea5d60SJunchao Zhang adjacent_difference(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),cusp->cooPerm_a->begin(),IJDiff()); /* cooPerm_a: [1,1,3,3,4,4] => [1,0,1,0,1,0]*/ 4060ddea5d60SJunchao Zhang adjacent_difference(w.begin(),w.end(),w.begin(),IJDiff()); /* w: [2,2,2,3,5,6] => [2,0,0,1,1,1]*/ 4061ddea5d60SJunchao Zhang (*cusp->cooPerm_a)[0] = 0; /* clear the first entry, though accessing an entry on device implies a cudaMemcpy */ 40627e8381f9SStefano Zampini w[0] = 0; 4063ddea5d60SJunchao Zhang thrust::transform(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),w.begin(),cusp->cooPerm_a->begin(),IJSum()); /* cooPerm_a = [0,0,1,1,1,1]*/ 4064ddea5d60SJunchao Zhang thrust::inclusive_scan(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),cusp->cooPerm_a->begin(),thrust::plus<PetscInt>()); /*cooPerm_a=[0,0,1,2,3,4]*/ 40657e8381f9SStefano Zampini } 40667e8381f9SStefano Zampini thrust::counting_iterator<PetscInt> search_begin(0); 4067ddea5d60SJunchao Zhang thrust::upper_bound(d_i.begin(), nekey.get_iterator_tuple().get<0>(), /* binary search entries of [0,1,2,3,4,5,6) in ordered array d_i = [1,3,3,4,4], supposing A->rmap->n = 6. */ 4068ddea5d60SJunchao Zhang search_begin, search_begin + A->rmap->n, /* return in ii[] the index of last position in d_i[] where value could be inserted without violating the ordering */ 4069ddea5d60SJunchao Zhang ii.begin()); /* ii = [0,1,1,3,5,5]. A leading 0 will be added later */ 407008391a17SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 40717e8381f9SStefano Zampini 40727e8381f9SStefano Zampini ierr = MatSeqXAIJFreeAIJ(A,&a->a,&a->j,&a->i);CHKERRQ(ierr); 40737e8381f9SStefano Zampini a->singlemalloc = PETSC_FALSE; 40747e8381f9SStefano Zampini a->free_a = PETSC_TRUE; 40757e8381f9SStefano Zampini a->free_ij = PETSC_TRUE; 40767e8381f9SStefano Zampini ierr = PetscMalloc1(A->rmap->n+1,&a->i);CHKERRQ(ierr); 4077ddea5d60SJunchao Zhang a->i[0] = 0; /* a->i = [0,0,1,1,3,5,5] */ 40787e8381f9SStefano Zampini cerr = cudaMemcpy(a->i+1,ii.data().get(),A->rmap->n*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 40797e8381f9SStefano Zampini a->nz = a->maxnz = a->i[A->rmap->n]; 4080fcdce8c4SStefano Zampini a->rmax = 0; 40817e8381f9SStefano Zampini ierr = PetscMalloc1(a->nz,&a->a);CHKERRQ(ierr); 40827e8381f9SStefano Zampini ierr = PetscMalloc1(a->nz,&a->j);CHKERRQ(ierr); 40837e8381f9SStefano Zampini cerr = cudaMemcpy(a->j,d_j.data().get(),a->nz*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 40847e8381f9SStefano Zampini if (!a->ilen) { ierr = PetscMalloc1(A->rmap->n,&a->ilen);CHKERRQ(ierr); } 40857e8381f9SStefano Zampini if (!a->imax) { ierr = PetscMalloc1(A->rmap->n,&a->imax);CHKERRQ(ierr); } 40867e8381f9SStefano Zampini for (PetscInt i = 0; i < A->rmap->n; i++) { 40877e8381f9SStefano Zampini const PetscInt nnzr = a->i[i+1] - a->i[i]; 40887e8381f9SStefano Zampini nzr += (PetscInt)!!(nnzr); 40897e8381f9SStefano Zampini a->ilen[i] = a->imax[i] = nnzr; 4090fcdce8c4SStefano Zampini a->rmax = PetscMax(a->rmax,nnzr); 40917e8381f9SStefano Zampini } 4092fcdce8c4SStefano Zampini a->nonzerorowcnt = nzr; 40937e8381f9SStefano Zampini A->preallocated = PETSC_TRUE; 40947e8381f9SStefano Zampini ierr = PetscLogGpuToCpu((A->rmap->n+a->nz)*sizeof(PetscInt));CHKERRQ(ierr); 4095fcdce8c4SStefano Zampini ierr = MatMarkDiagonal_SeqAIJ(A);CHKERRQ(ierr); 40967e8381f9SStefano Zampini } else { 40977e8381f9SStefano Zampini ierr = MatSeqAIJSetPreallocation(A,0,NULL);CHKERRQ(ierr); 40987e8381f9SStefano Zampini } 4099e61fc153SStefano Zampini ierr = MatSetOption(A,MAT_NEW_NONZERO_ALLOCATION_ERR,PETSC_TRUE);CHKERRQ(ierr); 41007e8381f9SStefano Zampini 41017e8381f9SStefano Zampini /* We want to allocate the CUSPARSE struct for matvec now. 4102e61fc153SStefano Zampini The code is so convoluted now that I prefer to copy zeros */ 4103e61fc153SStefano Zampini ierr = PetscArrayzero(a->a,a->nz);CHKERRQ(ierr); 41047e8381f9SStefano Zampini ierr = MatCheckCompressedRow(A,nzr,&a->compressedrow,a->i,A->rmap->n,0.6);CHKERRQ(ierr); 41057e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_CPU; 41067e8381f9SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 4107a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr); 41087e8381f9SStefano Zampini PetscFunctionReturn(0); 41097e8381f9SStefano Zampini } 4110ed502f03SStefano Zampini 4111219fbbafSJunchao Zhang PetscErrorCode MatSetPreallocationCOO_SeqAIJCUSPARSE(Mat mat, PetscCount coo_n, const PetscInt coo_i[], const PetscInt coo_j[]) 4112219fbbafSJunchao Zhang { 4113219fbbafSJunchao Zhang PetscErrorCode ierr; 4114219fbbafSJunchao Zhang cudaError_t cerr; 4115219fbbafSJunchao Zhang Mat_SeqAIJ *seq; 4116219fbbafSJunchao Zhang Mat_SeqAIJCUSPARSE *dev; 4117*cbc6b225SStefano Zampini PetscBool coo_basic = PETSC_TRUE; 4118219fbbafSJunchao Zhang PetscMemType mtype = PETSC_MEMTYPE_DEVICE; 4119219fbbafSJunchao Zhang 4120219fbbafSJunchao Zhang PetscFunctionBegin; 4121*cbc6b225SStefano Zampini ierr = MatResetPreallocationCOO_SeqAIJ(mat);CHKERRQ(ierr); 4122*cbc6b225SStefano Zampini ierr = MatResetPreallocationCOO_SeqAIJCUSPARSE(mat);CHKERRQ(ierr); 4123219fbbafSJunchao Zhang if (coo_i) { 4124219fbbafSJunchao Zhang ierr = PetscGetMemType(coo_i,&mtype);CHKERRQ(ierr); 4125219fbbafSJunchao Zhang if (PetscMemTypeHost(mtype)) { 4126219fbbafSJunchao Zhang for (PetscCount k=0; k<coo_n; k++) { 4127*cbc6b225SStefano Zampini if (coo_i[k] < 0 || coo_j[k] < 0) {coo_basic = PETSC_FALSE; break;} 4128219fbbafSJunchao Zhang } 4129219fbbafSJunchao Zhang } 4130219fbbafSJunchao Zhang } 4131219fbbafSJunchao Zhang 4132219fbbafSJunchao Zhang if (coo_basic) { /* i,j are on device or do not contain negative indices */ 4133219fbbafSJunchao Zhang ierr = MatSetPreallocationCOO_SeqAIJCUSPARSE_Basic(mat,coo_n,coo_i,coo_j);CHKERRQ(ierr); 4134219fbbafSJunchao Zhang } else { 4135*cbc6b225SStefano Zampini ierr = MatSetPreallocationCOO_SeqAIJ(mat,coo_n,coo_i,coo_j);CHKERRQ(ierr); 4136*cbc6b225SStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 4137baf1f5d7SJed Brown ierr = MatSeqAIJCUSPARSECopyToGPU(mat);CHKERRQ(ierr); 4138219fbbafSJunchao Zhang seq = static_cast<Mat_SeqAIJ*>(mat->data); 4139219fbbafSJunchao Zhang dev = static_cast<Mat_SeqAIJCUSPARSE*>(mat->spptr); 4140219fbbafSJunchao Zhang cerr = cudaMalloc((void**)&dev->jmap_d,(seq->nz+1)*sizeof(PetscCount));CHKERRCUDA(cerr); 4141219fbbafSJunchao Zhang cerr = cudaMemcpy(dev->jmap_d,seq->jmap,(seq->nz+1)*sizeof(PetscCount),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4142219fbbafSJunchao Zhang cerr = cudaMalloc((void**)&dev->perm_d,seq->Atot*sizeof(PetscCount));CHKERRCUDA(cerr); 4143219fbbafSJunchao Zhang cerr = cudaMemcpy(dev->perm_d,seq->perm,seq->Atot*sizeof(PetscCount),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4144219fbbafSJunchao Zhang dev->use_extended_coo = PETSC_TRUE; 4145219fbbafSJunchao Zhang } 4146219fbbafSJunchao Zhang PetscFunctionReturn(0); 4147219fbbafSJunchao Zhang } 4148219fbbafSJunchao Zhang 4149b6c38306SJunchao Zhang __global__ void MatAddCOOValues(const PetscScalar kv[],PetscCount nnz,const PetscCount jmap[],const PetscCount perm[],InsertMode imode,PetscScalar a[]) 4150219fbbafSJunchao Zhang { 4151219fbbafSJunchao Zhang PetscCount i = blockIdx.x*blockDim.x + threadIdx.x; 4152219fbbafSJunchao Zhang const PetscCount grid_size = gridDim.x * blockDim.x; 4153b6c38306SJunchao Zhang for (; i<nnz; i+= grid_size) { 4154b6c38306SJunchao Zhang PetscScalar sum = 0.0; 4155b6c38306SJunchao Zhang for (PetscCount k=jmap[i]; k<jmap[i+1]; k++) sum += kv[perm[k]]; 4156b6c38306SJunchao Zhang a[i] = (imode == INSERT_VALUES? 0.0 : a[i]) + sum; 4157b6c38306SJunchao Zhang } 4158219fbbafSJunchao Zhang } 4159219fbbafSJunchao Zhang 4160219fbbafSJunchao Zhang PetscErrorCode MatSetValuesCOO_SeqAIJCUSPARSE(Mat A, const PetscScalar v[], InsertMode imode) 4161219fbbafSJunchao Zhang { 4162219fbbafSJunchao Zhang PetscErrorCode ierr; 4163219fbbafSJunchao Zhang cudaError_t cerr; 4164219fbbafSJunchao Zhang Mat_SeqAIJ *seq = (Mat_SeqAIJ*)A->data; 4165219fbbafSJunchao Zhang Mat_SeqAIJCUSPARSE *dev = (Mat_SeqAIJCUSPARSE*)A->spptr; 4166219fbbafSJunchao Zhang PetscCount Annz = seq->nz; 4167219fbbafSJunchao Zhang PetscMemType memtype; 4168219fbbafSJunchao Zhang const PetscScalar *v1 = v; 4169219fbbafSJunchao Zhang PetscScalar *Aa; 4170219fbbafSJunchao Zhang 4171219fbbafSJunchao Zhang PetscFunctionBegin; 4172219fbbafSJunchao Zhang if (dev->use_extended_coo) { 4173219fbbafSJunchao Zhang ierr = PetscGetMemType(v,&memtype);CHKERRQ(ierr); 4174219fbbafSJunchao Zhang if (PetscMemTypeHost(memtype)) { /* If user gave v[] in host, we might need to copy it to device if any */ 4175219fbbafSJunchao Zhang cerr = cudaMalloc((void**)&v1,seq->coo_n*sizeof(PetscScalar));CHKERRCUDA(cerr); 41767487cd7cSJunchao Zhang cerr = cudaMemcpy((void*)v1,v,seq->coo_n*sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4177219fbbafSJunchao Zhang } 4178219fbbafSJunchao Zhang 4179b6c38306SJunchao Zhang if (imode == INSERT_VALUES) {ierr = MatSeqAIJCUSPARSEGetArrayWrite(A,&Aa);CHKERRQ(ierr);} 4180b6c38306SJunchao Zhang else {ierr = MatSeqAIJCUSPARSEGetArray(A,&Aa);CHKERRQ(ierr);} 4181219fbbafSJunchao Zhang 4182*cbc6b225SStefano Zampini if (Annz) { 4183b6c38306SJunchao Zhang MatAddCOOValues<<<(Annz+255)/256,256>>>(v1,Annz,dev->jmap_d,dev->perm_d,imode,Aa); 4184*cbc6b225SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); 4185*cbc6b225SStefano Zampini } 4186219fbbafSJunchao Zhang 4187219fbbafSJunchao Zhang if (imode == INSERT_VALUES) {ierr = MatSeqAIJCUSPARSERestoreArrayWrite(A,&Aa);CHKERRQ(ierr);} 4188219fbbafSJunchao Zhang else {ierr = MatSeqAIJCUSPARSERestoreArray(A,&Aa);CHKERRQ(ierr);} 4189219fbbafSJunchao Zhang 4190219fbbafSJunchao Zhang if (PetscMemTypeHost(memtype)) {cerr = cudaFree((void*)v1);CHKERRCUDA(cerr);} 4191219fbbafSJunchao Zhang } else { 4192219fbbafSJunchao Zhang ierr = MatSetValuesCOO_SeqAIJCUSPARSE_Basic(A,v,imode);CHKERRQ(ierr); 4193219fbbafSJunchao Zhang } 4194219fbbafSJunchao Zhang PetscFunctionReturn(0); 4195219fbbafSJunchao Zhang } 4196219fbbafSJunchao Zhang 41975b7e41feSStefano Zampini /*@C 41985b7e41feSStefano Zampini MatSeqAIJCUSPARSEGetIJ - returns the device row storage i and j indices for MATSEQAIJCUSPARSE matrices. 41995b7e41feSStefano Zampini 42005b7e41feSStefano Zampini Not collective 42015b7e41feSStefano Zampini 42025b7e41feSStefano Zampini Input Parameters: 42035b7e41feSStefano Zampini + A - the matrix 42045b7e41feSStefano Zampini - compressed - PETSC_TRUE or PETSC_FALSE indicating the matrix data structure should be always returned in compressed form 42055b7e41feSStefano Zampini 42065b7e41feSStefano Zampini Output Parameters: 42075b7e41feSStefano Zampini + ia - the CSR row pointers 42085b7e41feSStefano Zampini - ja - the CSR column indices 42095b7e41feSStefano Zampini 42105b7e41feSStefano Zampini Level: developer 42115b7e41feSStefano Zampini 42125b7e41feSStefano Zampini Notes: 42135b7e41feSStefano Zampini When compressed is true, the CSR structure does not contain empty rows 42145b7e41feSStefano Zampini 42155b7e41feSStefano Zampini .seealso: MatSeqAIJCUSPARSERestoreIJ(), MatSeqAIJCUSPARSEGetArrayRead() 42165b7e41feSStefano Zampini @*/ 42175f101d05SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetIJ(Mat A, PetscBool compressed, const int** i, const int **j) 42185f101d05SStefano Zampini { 42195f101d05SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 42205f101d05SStefano Zampini CsrMatrix *csr; 42215f101d05SStefano Zampini PetscErrorCode ierr; 42225f101d05SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 42235f101d05SStefano Zampini 42245f101d05SStefano Zampini PetscFunctionBegin; 42255f101d05SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 42265f101d05SStefano Zampini if (!i || !j) PetscFunctionReturn(0); 42275f101d05SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 42282c71b3e2SJacob Faibussowitsch PetscCheckFalse(cusp->format == MAT_CUSPARSE_ELL || cusp->format == MAT_CUSPARSE_HYB,PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 42295f101d05SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 42302c71b3e2SJacob Faibussowitsch PetscCheckFalse(!cusp->mat,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 42315f101d05SStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 42325f101d05SStefano Zampini if (i) { 42335f101d05SStefano Zampini if (!compressed && a->compressedrow.use) { /* need full row offset */ 42345f101d05SStefano Zampini if (!cusp->rowoffsets_gpu) { 42355f101d05SStefano Zampini cusp->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n + 1); 42365f101d05SStefano Zampini cusp->rowoffsets_gpu->assign(a->i,a->i + A->rmap->n + 1); 42375f101d05SStefano Zampini ierr = PetscLogCpuToGpu((A->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 42385f101d05SStefano Zampini } 42395f101d05SStefano Zampini *i = cusp->rowoffsets_gpu->data().get(); 42405f101d05SStefano Zampini } else *i = csr->row_offsets->data().get(); 42415f101d05SStefano Zampini } 42425f101d05SStefano Zampini if (j) *j = csr->column_indices->data().get(); 42435f101d05SStefano Zampini PetscFunctionReturn(0); 42445f101d05SStefano Zampini } 42455f101d05SStefano Zampini 42465b7e41feSStefano Zampini /*@C 42475b7e41feSStefano Zampini MatSeqAIJCUSPARSERestoreIJ - restore the device row storage i and j indices obtained with MatSeqAIJCUSPARSEGetIJ() 42485b7e41feSStefano Zampini 42495b7e41feSStefano Zampini Not collective 42505b7e41feSStefano Zampini 42515b7e41feSStefano Zampini Input Parameters: 42525b7e41feSStefano Zampini + A - the matrix 42535b7e41feSStefano Zampini - compressed - PETSC_TRUE or PETSC_FALSE indicating the matrix data structure should be always returned in compressed form 42545b7e41feSStefano Zampini 42555b7e41feSStefano Zampini Output Parameters: 42565b7e41feSStefano Zampini + ia - the CSR row pointers 42575b7e41feSStefano Zampini - ja - the CSR column indices 42585b7e41feSStefano Zampini 42595b7e41feSStefano Zampini Level: developer 42605b7e41feSStefano Zampini 42615b7e41feSStefano Zampini .seealso: MatSeqAIJCUSPARSEGetIJ() 42625b7e41feSStefano Zampini @*/ 42635f101d05SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreIJ(Mat A, PetscBool compressed, const int** i, const int **j) 42645f101d05SStefano Zampini { 42655f101d05SStefano Zampini PetscFunctionBegin; 42665f101d05SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 42675f101d05SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 42685f101d05SStefano Zampini if (i) *i = NULL; 42695f101d05SStefano Zampini if (j) *j = NULL; 42705f101d05SStefano Zampini PetscFunctionReturn(0); 42715f101d05SStefano Zampini } 42725f101d05SStefano Zampini 42735b7e41feSStefano Zampini /*@C 42745b7e41feSStefano Zampini MatSeqAIJCUSPARSEGetArrayRead - gives read-only access to the array where the device data for a MATSEQAIJCUSPARSE matrix is stored 42755b7e41feSStefano Zampini 42765b7e41feSStefano Zampini Not Collective 42775b7e41feSStefano Zampini 42785b7e41feSStefano Zampini Input Parameter: 42795b7e41feSStefano Zampini . A - a MATSEQAIJCUSPARSE matrix 42805b7e41feSStefano Zampini 42815b7e41feSStefano Zampini Output Parameter: 42825b7e41feSStefano Zampini . a - pointer to the device data 42835b7e41feSStefano Zampini 42845b7e41feSStefano Zampini Level: developer 42855b7e41feSStefano Zampini 42865b7e41feSStefano Zampini Notes: may trigger host-device copies if up-to-date matrix data is on host 42875b7e41feSStefano Zampini 42885b7e41feSStefano Zampini .seealso: MatSeqAIJCUSPARSEGetArray(), MatSeqAIJCUSPARSEGetArrayWrite(), MatSeqAIJCUSPARSERestoreArrayRead() 42895b7e41feSStefano Zampini @*/ 4290ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetArrayRead(Mat A, const PetscScalar** a) 4291ed502f03SStefano Zampini { 4292ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 4293ed502f03SStefano Zampini CsrMatrix *csr; 4294ed502f03SStefano Zampini PetscErrorCode ierr; 4295ed502f03SStefano Zampini 4296ed502f03SStefano Zampini PetscFunctionBegin; 4297ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 4298ed502f03SStefano Zampini PetscValidPointer(a,2); 4299ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 43002c71b3e2SJacob Faibussowitsch PetscCheckFalse(cusp->format == MAT_CUSPARSE_ELL || cusp->format == MAT_CUSPARSE_HYB,PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 4301ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 43022c71b3e2SJacob Faibussowitsch PetscCheckFalse(!cusp->mat,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 4303ed502f03SStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 43042c71b3e2SJacob Faibussowitsch PetscCheckFalse(!csr->values,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 4305ed502f03SStefano Zampini *a = csr->values->data().get(); 4306ed502f03SStefano Zampini PetscFunctionReturn(0); 4307ed502f03SStefano Zampini } 4308ed502f03SStefano Zampini 43095b7e41feSStefano Zampini /*@C 43105b7e41feSStefano Zampini MatSeqAIJCUSPARSERestoreArrayRead - restore the read-only access array obtained from MatSeqAIJCUSPARSEGetArrayRead() 43115b7e41feSStefano Zampini 43125b7e41feSStefano Zampini Not Collective 43135b7e41feSStefano Zampini 43145b7e41feSStefano Zampini Input Parameter: 43155b7e41feSStefano Zampini . A - a MATSEQAIJCUSPARSE matrix 43165b7e41feSStefano Zampini 43175b7e41feSStefano Zampini Output Parameter: 43185b7e41feSStefano Zampini . a - pointer to the device data 43195b7e41feSStefano Zampini 43205b7e41feSStefano Zampini Level: developer 43215b7e41feSStefano Zampini 43225b7e41feSStefano Zampini .seealso: MatSeqAIJCUSPARSEGetArrayRead() 43235b7e41feSStefano Zampini @*/ 4324ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreArrayRead(Mat A, const PetscScalar** a) 4325ed502f03SStefano Zampini { 4326ed502f03SStefano Zampini PetscFunctionBegin; 4327ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 4328ed502f03SStefano Zampini PetscValidPointer(a,2); 4329ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 4330ed502f03SStefano Zampini *a = NULL; 4331ed502f03SStefano Zampini PetscFunctionReturn(0); 4332ed502f03SStefano Zampini } 4333ed502f03SStefano Zampini 43345b7e41feSStefano Zampini /*@C 43355b7e41feSStefano Zampini MatSeqAIJCUSPARSEGetArray - gives read-write access to the array where the device data for a MATSEQAIJCUSPARSE matrix is stored 43365b7e41feSStefano Zampini 43375b7e41feSStefano Zampini Not Collective 43385b7e41feSStefano Zampini 43395b7e41feSStefano Zampini Input Parameter: 43405b7e41feSStefano Zampini . A - a MATSEQAIJCUSPARSE matrix 43415b7e41feSStefano Zampini 43425b7e41feSStefano Zampini Output Parameter: 43435b7e41feSStefano Zampini . a - pointer to the device data 43445b7e41feSStefano Zampini 43455b7e41feSStefano Zampini Level: developer 43465b7e41feSStefano Zampini 43475b7e41feSStefano Zampini Notes: may trigger host-device copies if up-to-date matrix data is on host 43485b7e41feSStefano Zampini 43495b7e41feSStefano Zampini .seealso: MatSeqAIJCUSPARSEGetArrayRead(), MatSeqAIJCUSPARSEGetArrayWrite(), MatSeqAIJCUSPARSERestoreArray() 43505b7e41feSStefano Zampini @*/ 4351039c6fbaSStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetArray(Mat A, PetscScalar** a) 4352039c6fbaSStefano Zampini { 4353039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 4354039c6fbaSStefano Zampini CsrMatrix *csr; 4355039c6fbaSStefano Zampini PetscErrorCode ierr; 4356039c6fbaSStefano Zampini 4357039c6fbaSStefano Zampini PetscFunctionBegin; 4358039c6fbaSStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 4359039c6fbaSStefano Zampini PetscValidPointer(a,2); 4360039c6fbaSStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 43612c71b3e2SJacob Faibussowitsch PetscCheckFalse(cusp->format == MAT_CUSPARSE_ELL || cusp->format == MAT_CUSPARSE_HYB,PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 4362039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 43632c71b3e2SJacob Faibussowitsch PetscCheckFalse(!cusp->mat,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 4364039c6fbaSStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 43652c71b3e2SJacob Faibussowitsch PetscCheckFalse(!csr->values,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 4366039c6fbaSStefano Zampini *a = csr->values->data().get(); 4367039c6fbaSStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 4368a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_FALSE);CHKERRQ(ierr); 4369039c6fbaSStefano Zampini PetscFunctionReturn(0); 4370039c6fbaSStefano Zampini } 43715b7e41feSStefano Zampini /*@C 43725b7e41feSStefano Zampini MatSeqAIJCUSPARSERestoreArray - restore the read-write access array obtained from MatSeqAIJCUSPARSEGetArray() 4373039c6fbaSStefano Zampini 43745b7e41feSStefano Zampini Not Collective 43755b7e41feSStefano Zampini 43765b7e41feSStefano Zampini Input Parameter: 43775b7e41feSStefano Zampini . A - a MATSEQAIJCUSPARSE matrix 43785b7e41feSStefano Zampini 43795b7e41feSStefano Zampini Output Parameter: 43805b7e41feSStefano Zampini . a - pointer to the device data 43815b7e41feSStefano Zampini 43825b7e41feSStefano Zampini Level: developer 43835b7e41feSStefano Zampini 43845b7e41feSStefano Zampini .seealso: MatSeqAIJCUSPARSEGetArray() 43855b7e41feSStefano Zampini @*/ 4386039c6fbaSStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreArray(Mat A, PetscScalar** a) 4387039c6fbaSStefano Zampini { 4388039c6fbaSStefano Zampini PetscErrorCode ierr; 4389039c6fbaSStefano Zampini 4390039c6fbaSStefano Zampini PetscFunctionBegin; 4391039c6fbaSStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 4392039c6fbaSStefano Zampini PetscValidPointer(a,2); 4393039c6fbaSStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 4394219fbbafSJunchao Zhang ierr = MatSeqAIJInvalidateDiagonal(A);CHKERRQ(ierr); 4395039c6fbaSStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr); 4396039c6fbaSStefano Zampini *a = NULL; 4397039c6fbaSStefano Zampini PetscFunctionReturn(0); 4398039c6fbaSStefano Zampini } 4399039c6fbaSStefano Zampini 44005b7e41feSStefano Zampini /*@C 44015b7e41feSStefano Zampini MatSeqAIJCUSPARSEGetArrayWrite - gives write access to the array where the device data for a MATSEQAIJCUSPARSE matrix is stored 44025b7e41feSStefano Zampini 44035b7e41feSStefano Zampini Not Collective 44045b7e41feSStefano Zampini 44055b7e41feSStefano Zampini Input Parameter: 44065b7e41feSStefano Zampini . A - a MATSEQAIJCUSPARSE matrix 44075b7e41feSStefano Zampini 44085b7e41feSStefano Zampini Output Parameter: 44095b7e41feSStefano Zampini . a - pointer to the device data 44105b7e41feSStefano Zampini 44115b7e41feSStefano Zampini Level: developer 44125b7e41feSStefano Zampini 44135b7e41feSStefano Zampini Notes: does not trigger host-device copies and flags data validity on the GPU 44145b7e41feSStefano Zampini 44155b7e41feSStefano Zampini .seealso: MatSeqAIJCUSPARSEGetArray(), MatSeqAIJCUSPARSEGetArrayRead(), MatSeqAIJCUSPARSERestoreArrayWrite() 44165b7e41feSStefano Zampini @*/ 4417ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetArrayWrite(Mat A, PetscScalar** a) 4418ed502f03SStefano Zampini { 4419ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 4420ed502f03SStefano Zampini CsrMatrix *csr; 4421a49f1ed0SStefano Zampini PetscErrorCode ierr; 4422ed502f03SStefano Zampini 4423ed502f03SStefano Zampini PetscFunctionBegin; 4424ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 4425ed502f03SStefano Zampini PetscValidPointer(a,2); 4426ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 44272c71b3e2SJacob Faibussowitsch PetscCheckFalse(cusp->format == MAT_CUSPARSE_ELL || cusp->format == MAT_CUSPARSE_HYB,PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 44282c71b3e2SJacob Faibussowitsch PetscCheckFalse(!cusp->mat,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 4429ed502f03SStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 44302c71b3e2SJacob Faibussowitsch PetscCheckFalse(!csr->values,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 4431ed502f03SStefano Zampini *a = csr->values->data().get(); 4432039c6fbaSStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 4433a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_FALSE);CHKERRQ(ierr); 4434ed502f03SStefano Zampini PetscFunctionReturn(0); 4435ed502f03SStefano Zampini } 4436ed502f03SStefano Zampini 44375b7e41feSStefano Zampini /*@C 44385b7e41feSStefano Zampini MatSeqAIJCUSPARSERestoreArrayWrite - restore the write-only access array obtained from MatSeqAIJCUSPARSEGetArrayWrite() 44395b7e41feSStefano Zampini 44405b7e41feSStefano Zampini Not Collective 44415b7e41feSStefano Zampini 44425b7e41feSStefano Zampini Input Parameter: 44435b7e41feSStefano Zampini . A - a MATSEQAIJCUSPARSE matrix 44445b7e41feSStefano Zampini 44455b7e41feSStefano Zampini Output Parameter: 44465b7e41feSStefano Zampini . a - pointer to the device data 44475b7e41feSStefano Zampini 44485b7e41feSStefano Zampini Level: developer 44495b7e41feSStefano Zampini 44505b7e41feSStefano Zampini .seealso: MatSeqAIJCUSPARSEGetArrayWrite() 44515b7e41feSStefano Zampini @*/ 4452ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreArrayWrite(Mat A, PetscScalar** a) 4453ed502f03SStefano Zampini { 4454ed502f03SStefano Zampini PetscErrorCode ierr; 4455ed502f03SStefano Zampini 4456ed502f03SStefano Zampini PetscFunctionBegin; 4457ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 4458ed502f03SStefano Zampini PetscValidPointer(a,2); 4459ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 4460219fbbafSJunchao Zhang ierr = MatSeqAIJInvalidateDiagonal(A);CHKERRQ(ierr); 4461ed502f03SStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr); 4462ed502f03SStefano Zampini *a = NULL; 4463ed502f03SStefano Zampini PetscFunctionReturn(0); 4464ed502f03SStefano Zampini } 4465ed502f03SStefano Zampini 4466ed502f03SStefano Zampini struct IJCompare4 4467ed502f03SStefano Zampini { 4468ed502f03SStefano Zampini __host__ __device__ 44692ed87e7eSStefano Zampini inline bool operator() (const thrust::tuple<int, int, PetscScalar, int> &t1, const thrust::tuple<int, int, PetscScalar, int> &t2) 4470ed502f03SStefano Zampini { 4471ed502f03SStefano Zampini if (t1.get<0>() < t2.get<0>()) return true; 4472ed502f03SStefano Zampini if (t1.get<0>() == t2.get<0>()) return t1.get<1>() < t2.get<1>(); 4473ed502f03SStefano Zampini return false; 4474ed502f03SStefano Zampini } 4475ed502f03SStefano Zampini }; 4476ed502f03SStefano Zampini 44778909a122SStefano Zampini struct Shift 44788909a122SStefano Zampini { 4479ed502f03SStefano Zampini int _shift; 4480ed502f03SStefano Zampini 4481ed502f03SStefano Zampini Shift(int shift) : _shift(shift) {} 4482ed502f03SStefano Zampini __host__ __device__ 4483ed502f03SStefano Zampini inline int operator() (const int &c) 4484ed502f03SStefano Zampini { 4485ed502f03SStefano Zampini return c + _shift; 4486ed502f03SStefano Zampini } 4487ed502f03SStefano Zampini }; 4488ed502f03SStefano Zampini 4489ddea5d60SJunchao Zhang /* merges two SeqAIJCUSPARSE matrices A, B by concatenating their rows. [A';B']' operation in matlab notation */ 4490ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEMergeMats(Mat A,Mat B,MatReuse reuse,Mat* C) 4491ed502f03SStefano Zampini { 4492ed502f03SStefano Zampini PetscErrorCode ierr; 4493ed502f03SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data, *b = (Mat_SeqAIJ*)B->data, *c; 4494ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr, *Bcusp = (Mat_SeqAIJCUSPARSE*)B->spptr, *Ccusp; 4495ed502f03SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Cmat; 4496ed502f03SStefano Zampini CsrMatrix *Acsr,*Bcsr,*Ccsr; 4497ed502f03SStefano Zampini PetscInt Annz,Bnnz; 4498ed502f03SStefano Zampini cusparseStatus_t stat; 4499ed502f03SStefano Zampini PetscInt i,m,n,zero = 0; 4500ed502f03SStefano Zampini cudaError_t cerr; 4501ed502f03SStefano Zampini 4502ed502f03SStefano Zampini PetscFunctionBegin; 4503ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 4504ed502f03SStefano Zampini PetscValidHeaderSpecific(B,MAT_CLASSID,2); 4505ed502f03SStefano Zampini PetscValidPointer(C,4); 4506ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 4507ed502f03SStefano Zampini PetscCheckTypeName(B,MATSEQAIJCUSPARSE); 45082c71b3e2SJacob Faibussowitsch PetscCheckFalse(A->rmap->n != B->rmap->n,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Invalid number or rows %" PetscInt_FMT " != %" PetscInt_FMT,A->rmap->n,B->rmap->n); 45092c71b3e2SJacob Faibussowitsch PetscCheckFalse(reuse == MAT_INPLACE_MATRIX,PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_INPLACE_MATRIX not supported"); 45102c71b3e2SJacob Faibussowitsch PetscCheckFalse(Acusp->format == MAT_CUSPARSE_ELL || Acusp->format == MAT_CUSPARSE_HYB,PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 45112c71b3e2SJacob Faibussowitsch PetscCheckFalse(Bcusp->format == MAT_CUSPARSE_ELL || Bcusp->format == MAT_CUSPARSE_HYB,PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 4512ed502f03SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 4513ed502f03SStefano Zampini m = A->rmap->n; 4514ed502f03SStefano Zampini n = A->cmap->n + B->cmap->n; 4515ed502f03SStefano Zampini ierr = MatCreate(PETSC_COMM_SELF,C);CHKERRQ(ierr); 4516ed502f03SStefano Zampini ierr = MatSetSizes(*C,m,n,m,n);CHKERRQ(ierr); 4517ed502f03SStefano Zampini ierr = MatSetType(*C,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 4518ed502f03SStefano Zampini c = (Mat_SeqAIJ*)(*C)->data; 4519ed502f03SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)(*C)->spptr; 4520ed502f03SStefano Zampini Cmat = new Mat_SeqAIJCUSPARSEMultStruct; 4521ed502f03SStefano Zampini Ccsr = new CsrMatrix; 4522ed502f03SStefano Zampini Cmat->cprowIndices = NULL; 4523ed502f03SStefano Zampini c->compressedrow.use = PETSC_FALSE; 4524ed502f03SStefano Zampini c->compressedrow.nrows = 0; 4525ed502f03SStefano Zampini c->compressedrow.i = NULL; 4526ed502f03SStefano Zampini c->compressedrow.rindex = NULL; 4527ed502f03SStefano Zampini Ccusp->workVector = NULL; 4528ed502f03SStefano Zampini Ccusp->nrows = m; 4529ed502f03SStefano Zampini Ccusp->mat = Cmat; 4530ed502f03SStefano Zampini Ccusp->mat->mat = Ccsr; 4531ed502f03SStefano Zampini Ccsr->num_rows = m; 4532ed502f03SStefano Zampini Ccsr->num_cols = n; 4533ed502f03SStefano Zampini stat = cusparseCreateMatDescr(&Cmat->descr);CHKERRCUSPARSE(stat); 4534ed502f03SStefano Zampini stat = cusparseSetMatIndexBase(Cmat->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 4535ed502f03SStefano Zampini stat = cusparseSetMatType(Cmat->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 4536ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->alpha_one),sizeof(PetscScalar));CHKERRCUDA(cerr); 4537ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_zero),sizeof(PetscScalar));CHKERRCUDA(cerr); 4538ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_one), sizeof(PetscScalar));CHKERRCUDA(cerr); 4539ed502f03SStefano Zampini cerr = cudaMemcpy(Cmat->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4540ed502f03SStefano Zampini cerr = cudaMemcpy(Cmat->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4541ed502f03SStefano Zampini cerr = cudaMemcpy(Cmat->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4542ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 4543ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 45442c71b3e2SJacob Faibussowitsch PetscCheckFalse(!Acusp->mat,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 45452c71b3e2SJacob Faibussowitsch PetscCheckFalse(!Bcusp->mat,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 4546ed502f03SStefano Zampini 4547ed502f03SStefano Zampini Acsr = (CsrMatrix*)Acusp->mat->mat; 4548ed502f03SStefano Zampini Bcsr = (CsrMatrix*)Bcusp->mat->mat; 4549ed502f03SStefano Zampini Annz = (PetscInt)Acsr->column_indices->size(); 4550ed502f03SStefano Zampini Bnnz = (PetscInt)Bcsr->column_indices->size(); 4551ed502f03SStefano Zampini c->nz = Annz + Bnnz; 4552ed502f03SStefano Zampini Ccsr->row_offsets = new THRUSTINTARRAY32(m+1); 4553ed502f03SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 4554ed502f03SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 4555ed502f03SStefano Zampini Ccsr->num_entries = c->nz; 4556ed502f03SStefano Zampini Ccusp->cooPerm = new THRUSTINTARRAY(c->nz); 4557ed502f03SStefano Zampini if (c->nz) { 45582ed87e7eSStefano Zampini auto Acoo = new THRUSTINTARRAY32(Annz); 45592ed87e7eSStefano Zampini auto Bcoo = new THRUSTINTARRAY32(Bnnz); 45602ed87e7eSStefano Zampini auto Ccoo = new THRUSTINTARRAY32(c->nz); 45612ed87e7eSStefano Zampini THRUSTINTARRAY32 *Aroff,*Broff; 45622ed87e7eSStefano Zampini 4563ed502f03SStefano Zampini if (a->compressedrow.use) { /* need full row offset */ 4564ed502f03SStefano Zampini if (!Acusp->rowoffsets_gpu) { 4565ed502f03SStefano Zampini Acusp->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n + 1); 4566ed502f03SStefano Zampini Acusp->rowoffsets_gpu->assign(a->i,a->i + A->rmap->n + 1); 4567ed502f03SStefano Zampini ierr = PetscLogCpuToGpu((A->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 4568ed502f03SStefano Zampini } 45692ed87e7eSStefano Zampini Aroff = Acusp->rowoffsets_gpu; 45702ed87e7eSStefano Zampini } else Aroff = Acsr->row_offsets; 4571ed502f03SStefano Zampini if (b->compressedrow.use) { /* need full row offset */ 4572ed502f03SStefano Zampini if (!Bcusp->rowoffsets_gpu) { 4573ed502f03SStefano Zampini Bcusp->rowoffsets_gpu = new THRUSTINTARRAY32(B->rmap->n + 1); 4574ed502f03SStefano Zampini Bcusp->rowoffsets_gpu->assign(b->i,b->i + B->rmap->n + 1); 4575ed502f03SStefano Zampini ierr = PetscLogCpuToGpu((B->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 4576ed502f03SStefano Zampini } 45772ed87e7eSStefano Zampini Broff = Bcusp->rowoffsets_gpu; 45782ed87e7eSStefano Zampini } else Broff = Bcsr->row_offsets; 4579ed502f03SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 45802ed87e7eSStefano Zampini stat = cusparseXcsr2coo(Acusp->handle, 45812ed87e7eSStefano Zampini Aroff->data().get(), 45822ed87e7eSStefano Zampini Annz, 45832ed87e7eSStefano Zampini m, 45842ed87e7eSStefano Zampini Acoo->data().get(), 45852ed87e7eSStefano Zampini CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 4586ed502f03SStefano Zampini stat = cusparseXcsr2coo(Bcusp->handle, 45872ed87e7eSStefano Zampini Broff->data().get(), 4588ed502f03SStefano Zampini Bnnz, 4589ed502f03SStefano Zampini m, 45902ed87e7eSStefano Zampini Bcoo->data().get(), 4591ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 45922ed87e7eSStefano Zampini /* Issues when using bool with large matrices on SUMMIT 10.2.89 */ 45932ed87e7eSStefano Zampini auto Aperm = thrust::make_constant_iterator(1); 45942ed87e7eSStefano Zampini auto Bperm = thrust::make_constant_iterator(0); 45958909a122SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(10,0,0) 4596ed502f03SStefano Zampini auto Bcib = thrust::make_transform_iterator(Bcsr->column_indices->begin(),Shift(A->cmap->n)); 4597ed502f03SStefano Zampini auto Bcie = thrust::make_transform_iterator(Bcsr->column_indices->end(),Shift(A->cmap->n)); 45988909a122SStefano Zampini #else 45998909a122SStefano Zampini /* there are issues instantiating the merge operation using a transform iterator for the columns of B */ 46008909a122SStefano Zampini auto Bcib = Bcsr->column_indices->begin(); 46018909a122SStefano Zampini auto Bcie = Bcsr->column_indices->end(); 46028909a122SStefano Zampini thrust::transform(Bcib,Bcie,Bcib,Shift(A->cmap->n)); 46038909a122SStefano Zampini #endif 46042ed87e7eSStefano Zampini auto wPerm = new THRUSTINTARRAY32(Annz+Bnnz); 46052ed87e7eSStefano Zampini auto Azb = thrust::make_zip_iterator(thrust::make_tuple(Acoo->begin(),Acsr->column_indices->begin(),Acsr->values->begin(),Aperm)); 46062ed87e7eSStefano Zampini auto Aze = thrust::make_zip_iterator(thrust::make_tuple(Acoo->end(),Acsr->column_indices->end(),Acsr->values->end(),Aperm)); 46072ed87e7eSStefano Zampini auto Bzb = thrust::make_zip_iterator(thrust::make_tuple(Bcoo->begin(),Bcib,Bcsr->values->begin(),Bperm)); 46082ed87e7eSStefano Zampini auto Bze = thrust::make_zip_iterator(thrust::make_tuple(Bcoo->end(),Bcie,Bcsr->values->end(),Bperm)); 46092ed87e7eSStefano Zampini auto Czb = thrust::make_zip_iterator(thrust::make_tuple(Ccoo->begin(),Ccsr->column_indices->begin(),Ccsr->values->begin(),wPerm->begin())); 4610ed502f03SStefano Zampini auto p1 = Ccusp->cooPerm->begin(); 4611ed502f03SStefano Zampini auto p2 = Ccusp->cooPerm->begin(); 4612ed502f03SStefano Zampini thrust::advance(p2,Annz); 46132ed87e7eSStefano Zampini PetscStackCallThrust(thrust::merge(thrust::device,Azb,Aze,Bzb,Bze,Czb,IJCompare4())); 46148909a122SStefano Zampini #if PETSC_PKG_CUDA_VERSION_LT(10,0,0) 46158909a122SStefano Zampini thrust::transform(Bcib,Bcie,Bcib,Shift(-A->cmap->n)); 46168909a122SStefano Zampini #endif 46172ed87e7eSStefano Zampini auto cci = thrust::make_counting_iterator(zero); 46182ed87e7eSStefano Zampini auto cce = thrust::make_counting_iterator(c->nz); 46192ed87e7eSStefano Zampini #if 0 //Errors on SUMMIT cuda 11.1.0 46202ed87e7eSStefano Zampini PetscStackCallThrust(thrust::partition_copy(thrust::device,cci,cce,wPerm->begin(),p1,p2,thrust::identity<int>())); 46212ed87e7eSStefano Zampini #else 46222ed87e7eSStefano Zampini auto pred = thrust::identity<int>(); 46232ed87e7eSStefano Zampini PetscStackCallThrust(thrust::copy_if(thrust::device,cci,cce,wPerm->begin(),p1,pred)); 46242ed87e7eSStefano Zampini PetscStackCallThrust(thrust::remove_copy_if(thrust::device,cci,cce,wPerm->begin(),p2,pred)); 46252ed87e7eSStefano Zampini #endif 4626ed502f03SStefano Zampini stat = cusparseXcoo2csr(Ccusp->handle, 46272ed87e7eSStefano Zampini Ccoo->data().get(), 4628ed502f03SStefano Zampini c->nz, 4629ed502f03SStefano Zampini m, 4630ed502f03SStefano Zampini Ccsr->row_offsets->data().get(), 4631ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 4632ed502f03SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 46332ed87e7eSStefano Zampini delete wPerm; 46342ed87e7eSStefano Zampini delete Acoo; 46352ed87e7eSStefano Zampini delete Bcoo; 46362ed87e7eSStefano Zampini delete Ccoo; 4637ed502f03SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 4638ed502f03SStefano Zampini stat = cusparseCreateCsr(&Cmat->matDescr, Ccsr->num_rows, Ccsr->num_cols, Ccsr->num_entries, 4639ed502f03SStefano Zampini Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get(), Ccsr->values->data().get(), 4640ed502f03SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 4641ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 4642ed502f03SStefano Zampini #endif 46431a2c6b5cSJunchao Zhang if (A->form_explicit_transpose && B->form_explicit_transpose) { /* if A and B have the transpose, generate C transpose too */ 46443606e59fSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTranspose(A);CHKERRQ(ierr); 46453606e59fSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTranspose(B);CHKERRQ(ierr); 4646ed502f03SStefano Zampini PetscBool AT = Acusp->matTranspose ? PETSC_TRUE : PETSC_FALSE, BT = Bcusp->matTranspose ? PETSC_TRUE : PETSC_FALSE; 4647ed502f03SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *CmatT = new Mat_SeqAIJCUSPARSEMultStruct; 4648ed502f03SStefano Zampini CsrMatrix *CcsrT = new CsrMatrix; 4649ed502f03SStefano Zampini CsrMatrix *AcsrT = AT ? (CsrMatrix*)Acusp->matTranspose->mat : NULL; 4650ed502f03SStefano Zampini CsrMatrix *BcsrT = BT ? (CsrMatrix*)Bcusp->matTranspose->mat : NULL; 4651ed502f03SStefano Zampini 46521a2c6b5cSJunchao Zhang (*C)->form_explicit_transpose = PETSC_TRUE; 46531a2c6b5cSJunchao Zhang (*C)->transupdated = PETSC_TRUE; 4654a49f1ed0SStefano Zampini Ccusp->rowoffsets_gpu = NULL; 4655ed502f03SStefano Zampini CmatT->cprowIndices = NULL; 4656ed502f03SStefano Zampini CmatT->mat = CcsrT; 4657ed502f03SStefano Zampini CcsrT->num_rows = n; 4658ed502f03SStefano Zampini CcsrT->num_cols = m; 4659ed502f03SStefano Zampini CcsrT->num_entries = c->nz; 4660ed502f03SStefano Zampini 4661ed502f03SStefano Zampini CcsrT->row_offsets = new THRUSTINTARRAY32(n+1); 4662ed502f03SStefano Zampini CcsrT->column_indices = new THRUSTINTARRAY32(c->nz); 4663ed502f03SStefano Zampini CcsrT->values = new THRUSTARRAY(c->nz); 4664ed502f03SStefano Zampini 4665ed502f03SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 4666ed502f03SStefano Zampini auto rT = CcsrT->row_offsets->begin(); 4667ed502f03SStefano Zampini if (AT) { 4668ed502f03SStefano Zampini rT = thrust::copy(AcsrT->row_offsets->begin(),AcsrT->row_offsets->end(),rT); 4669ed502f03SStefano Zampini thrust::advance(rT,-1); 4670ed502f03SStefano Zampini } 4671ed502f03SStefano Zampini if (BT) { 4672ed502f03SStefano Zampini auto titb = thrust::make_transform_iterator(BcsrT->row_offsets->begin(),Shift(a->nz)); 4673ed502f03SStefano Zampini auto tite = thrust::make_transform_iterator(BcsrT->row_offsets->end(),Shift(a->nz)); 4674ed502f03SStefano Zampini thrust::copy(titb,tite,rT); 4675ed502f03SStefano Zampini } 4676ed502f03SStefano Zampini auto cT = CcsrT->column_indices->begin(); 4677ed502f03SStefano Zampini if (AT) cT = thrust::copy(AcsrT->column_indices->begin(),AcsrT->column_indices->end(),cT); 4678ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->column_indices->begin(),BcsrT->column_indices->end(),cT); 4679ed502f03SStefano Zampini auto vT = CcsrT->values->begin(); 4680ed502f03SStefano Zampini if (AT) vT = thrust::copy(AcsrT->values->begin(),AcsrT->values->end(),vT); 4681ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->values->begin(),BcsrT->values->end(),vT); 4682ed502f03SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 4683ed502f03SStefano Zampini 4684ed502f03SStefano Zampini stat = cusparseCreateMatDescr(&CmatT->descr);CHKERRCUSPARSE(stat); 4685ed502f03SStefano Zampini stat = cusparseSetMatIndexBase(CmatT->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 4686ed502f03SStefano Zampini stat = cusparseSetMatType(CmatT->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 4687ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(CmatT->alpha_one),sizeof(PetscScalar));CHKERRCUDA(cerr); 4688ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(CmatT->beta_zero),sizeof(PetscScalar));CHKERRCUDA(cerr); 4689ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(CmatT->beta_one), sizeof(PetscScalar));CHKERRCUDA(cerr); 4690ed502f03SStefano Zampini cerr = cudaMemcpy(CmatT->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4691ed502f03SStefano Zampini cerr = cudaMemcpy(CmatT->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4692ed502f03SStefano Zampini cerr = cudaMemcpy(CmatT->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4693ed502f03SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 4694ed502f03SStefano Zampini stat = cusparseCreateCsr(&CmatT->matDescr, CcsrT->num_rows, CcsrT->num_cols, CcsrT->num_entries, 4695ed502f03SStefano Zampini CcsrT->row_offsets->data().get(), CcsrT->column_indices->data().get(), CcsrT->values->data().get(), 4696ed502f03SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 4697ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 4698ed502f03SStefano Zampini #endif 4699ed502f03SStefano Zampini Ccusp->matTranspose = CmatT; 4700ed502f03SStefano Zampini } 4701ed502f03SStefano Zampini } 4702ed502f03SStefano Zampini 4703ed502f03SStefano Zampini c->singlemalloc = PETSC_FALSE; 4704ed502f03SStefano Zampini c->free_a = PETSC_TRUE; 4705ed502f03SStefano Zampini c->free_ij = PETSC_TRUE; 4706ed502f03SStefano Zampini ierr = PetscMalloc1(m+1,&c->i);CHKERRQ(ierr); 4707ed502f03SStefano Zampini ierr = PetscMalloc1(c->nz,&c->j);CHKERRQ(ierr); 4708ed502f03SStefano Zampini if (PetscDefined(USE_64BIT_INDICES)) { /* 32 to 64 bit conversion on the GPU and then copy to host (lazy) */ 4709ed502f03SStefano Zampini THRUSTINTARRAY ii(Ccsr->row_offsets->size()); 4710ed502f03SStefano Zampini THRUSTINTARRAY jj(Ccsr->column_indices->size()); 4711ed502f03SStefano Zampini ii = *Ccsr->row_offsets; 4712ed502f03SStefano Zampini jj = *Ccsr->column_indices; 4713ed502f03SStefano Zampini cerr = cudaMemcpy(c->i,ii.data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4714ed502f03SStefano Zampini cerr = cudaMemcpy(c->j,jj.data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4715ed502f03SStefano Zampini } else { 4716ed502f03SStefano Zampini cerr = cudaMemcpy(c->i,Ccsr->row_offsets->data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4717ed502f03SStefano Zampini cerr = cudaMemcpy(c->j,Ccsr->column_indices->data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4718ed502f03SStefano Zampini } 4719ed502f03SStefano Zampini ierr = PetscLogGpuToCpu((Ccsr->column_indices->size() + Ccsr->row_offsets->size())*sizeof(PetscInt));CHKERRQ(ierr); 4720ed502f03SStefano Zampini ierr = PetscMalloc1(m,&c->ilen);CHKERRQ(ierr); 4721ed502f03SStefano Zampini ierr = PetscMalloc1(m,&c->imax);CHKERRQ(ierr); 4722ed502f03SStefano Zampini c->maxnz = c->nz; 4723ed502f03SStefano Zampini c->nonzerorowcnt = 0; 4724ed502f03SStefano Zampini c->rmax = 0; 4725ed502f03SStefano Zampini for (i = 0; i < m; i++) { 4726ed502f03SStefano Zampini const PetscInt nn = c->i[i+1] - c->i[i]; 4727ed502f03SStefano Zampini c->ilen[i] = c->imax[i] = nn; 4728ed502f03SStefano Zampini c->nonzerorowcnt += (PetscInt)!!nn; 4729ed502f03SStefano Zampini c->rmax = PetscMax(c->rmax,nn); 4730ed502f03SStefano Zampini } 4731ed502f03SStefano Zampini ierr = MatMarkDiagonal_SeqAIJ(*C);CHKERRQ(ierr); 4732ed502f03SStefano Zampini ierr = PetscMalloc1(c->nz,&c->a);CHKERRQ(ierr); 4733ed502f03SStefano Zampini (*C)->nonzerostate++; 4734ed502f03SStefano Zampini ierr = PetscLayoutSetUp((*C)->rmap);CHKERRQ(ierr); 4735ed502f03SStefano Zampini ierr = PetscLayoutSetUp((*C)->cmap);CHKERRQ(ierr); 4736ed502f03SStefano Zampini Ccusp->nonzerostate = (*C)->nonzerostate; 4737ed502f03SStefano Zampini (*C)->preallocated = PETSC_TRUE; 4738ed502f03SStefano Zampini } else { 47392c71b3e2SJacob Faibussowitsch PetscCheckFalse((*C)->rmap->n != B->rmap->n,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Invalid number or rows %" PetscInt_FMT " != %" PetscInt_FMT,(*C)->rmap->n,B->rmap->n); 4740ed502f03SStefano Zampini c = (Mat_SeqAIJ*)(*C)->data; 4741ed502f03SStefano Zampini if (c->nz) { 4742ed502f03SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)(*C)->spptr; 47432c71b3e2SJacob Faibussowitsch PetscCheckFalse(!Ccusp->cooPerm,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cooPerm"); 47442c71b3e2SJacob Faibussowitsch PetscCheckFalse(Ccusp->format == MAT_CUSPARSE_ELL || Ccusp->format == MAT_CUSPARSE_HYB,PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 47452c71b3e2SJacob Faibussowitsch PetscCheckFalse(Ccusp->nonzerostate != (*C)->nonzerostate,PETSC_COMM_SELF,PETSC_ERR_COR,"Wrong nonzerostate"); 4746ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 4747ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 47482c71b3e2SJacob Faibussowitsch PetscCheckFalse(!Acusp->mat,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 47492c71b3e2SJacob Faibussowitsch PetscCheckFalse(!Bcusp->mat,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 4750ed502f03SStefano Zampini Acsr = (CsrMatrix*)Acusp->mat->mat; 4751ed502f03SStefano Zampini Bcsr = (CsrMatrix*)Bcusp->mat->mat; 4752ed502f03SStefano Zampini Ccsr = (CsrMatrix*)Ccusp->mat->mat; 47532c71b3e2SJacob Faibussowitsch PetscCheckFalse(Acsr->num_entries != (PetscInt)Acsr->values->size(),PETSC_COMM_SELF,PETSC_ERR_COR,"A nnz %" PetscInt_FMT " != %" PetscInt_FMT,Acsr->num_entries,(PetscInt)Acsr->values->size()); 47542c71b3e2SJacob Faibussowitsch PetscCheckFalse(Bcsr->num_entries != (PetscInt)Bcsr->values->size(),PETSC_COMM_SELF,PETSC_ERR_COR,"B nnz %" PetscInt_FMT " != %" PetscInt_FMT,Bcsr->num_entries,(PetscInt)Bcsr->values->size()); 47552c71b3e2SJacob Faibussowitsch PetscCheckFalse(Ccsr->num_entries != (PetscInt)Ccsr->values->size(),PETSC_COMM_SELF,PETSC_ERR_COR,"C nnz %" PetscInt_FMT " != %" PetscInt_FMT,Ccsr->num_entries,(PetscInt)Ccsr->values->size()); 47562c71b3e2SJacob Faibussowitsch PetscCheckFalse(Ccsr->num_entries != Acsr->num_entries + Bcsr->num_entries,PETSC_COMM_SELF,PETSC_ERR_COR,"C nnz %" PetscInt_FMT " != %" PetscInt_FMT " + %" PetscInt_FMT,Ccsr->num_entries,Acsr->num_entries,Bcsr->num_entries); 47572c71b3e2SJacob Faibussowitsch PetscCheckFalse(Ccusp->cooPerm->size() != Ccsr->values->size(),PETSC_COMM_SELF,PETSC_ERR_COR,"permSize %" PetscInt_FMT " != %" PetscInt_FMT,(PetscInt)Ccusp->cooPerm->size(),(PetscInt)Ccsr->values->size()); 4758ed502f03SStefano Zampini auto pmid = Ccusp->cooPerm->begin(); 4759ed502f03SStefano Zampini thrust::advance(pmid,Acsr->num_entries); 4760ed502f03SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 4761ed502f03SStefano Zampini auto zibait = thrust::make_zip_iterator(thrust::make_tuple(Acsr->values->begin(), 4762ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),Ccusp->cooPerm->begin()))); 4763ed502f03SStefano Zampini auto zieait = thrust::make_zip_iterator(thrust::make_tuple(Acsr->values->end(), 4764ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),pmid))); 4765ed502f03SStefano Zampini thrust::for_each(zibait,zieait,VecCUDAEquals()); 4766ed502f03SStefano Zampini auto zibbit = thrust::make_zip_iterator(thrust::make_tuple(Bcsr->values->begin(), 4767ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),pmid))); 4768ed502f03SStefano Zampini auto ziebit = thrust::make_zip_iterator(thrust::make_tuple(Bcsr->values->end(), 4769ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),Ccusp->cooPerm->end()))); 4770ed502f03SStefano Zampini thrust::for_each(zibbit,ziebit,VecCUDAEquals()); 4771a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(*C,PETSC_FALSE);CHKERRQ(ierr); 47721a2c6b5cSJunchao Zhang if (A->form_explicit_transpose && B->form_explicit_transpose && (*C)->form_explicit_transpose) { 47732c71b3e2SJacob Faibussowitsch PetscCheckFalse(!Ccusp->matTranspose,PETSC_COMM_SELF,PETSC_ERR_COR,"Missing transpose Mat_SeqAIJCUSPARSEMultStruct"); 4774ed502f03SStefano Zampini PetscBool AT = Acusp->matTranspose ? PETSC_TRUE : PETSC_FALSE, BT = Bcusp->matTranspose ? PETSC_TRUE : PETSC_FALSE; 4775ed502f03SStefano Zampini CsrMatrix *AcsrT = AT ? (CsrMatrix*)Acusp->matTranspose->mat : NULL; 4776ed502f03SStefano Zampini CsrMatrix *BcsrT = BT ? (CsrMatrix*)Bcusp->matTranspose->mat : NULL; 4777ed502f03SStefano Zampini CsrMatrix *CcsrT = (CsrMatrix*)Ccusp->matTranspose->mat; 4778ed502f03SStefano Zampini auto vT = CcsrT->values->begin(); 4779ed502f03SStefano Zampini if (AT) vT = thrust::copy(AcsrT->values->begin(),AcsrT->values->end(),vT); 4780ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->values->begin(),BcsrT->values->end(),vT); 47811a2c6b5cSJunchao Zhang (*C)->transupdated = PETSC_TRUE; 4782ed502f03SStefano Zampini } 4783ed502f03SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 4784ed502f03SStefano Zampini } 4785ed502f03SStefano Zampini } 4786ed502f03SStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)*C);CHKERRQ(ierr); 4787ed502f03SStefano Zampini (*C)->assembled = PETSC_TRUE; 4788ed502f03SStefano Zampini (*C)->was_assembled = PETSC_FALSE; 4789ed502f03SStefano Zampini (*C)->offloadmask = PETSC_OFFLOAD_GPU; 4790ed502f03SStefano Zampini PetscFunctionReturn(0); 4791ed502f03SStefano Zampini } 4792c215019aSStefano Zampini 4793c215019aSStefano Zampini static PetscErrorCode MatSeqAIJCopySubArray_SeqAIJCUSPARSE(Mat A, PetscInt n, const PetscInt idx[], PetscScalar v[]) 4794c215019aSStefano Zampini { 4795c215019aSStefano Zampini PetscErrorCode ierr; 4796c215019aSStefano Zampini bool dmem; 4797c215019aSStefano Zampini const PetscScalar *av; 4798c215019aSStefano Zampini cudaError_t cerr; 4799c215019aSStefano Zampini 4800c215019aSStefano Zampini PetscFunctionBegin; 4801c215019aSStefano Zampini dmem = isCudaMem(v); 4802c215019aSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArrayRead(A,&av);CHKERRQ(ierr); 4803c215019aSStefano Zampini if (n && idx) { 4804c215019aSStefano Zampini THRUSTINTARRAY widx(n); 4805c215019aSStefano Zampini widx.assign(idx,idx+n); 4806c215019aSStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscInt));CHKERRQ(ierr); 4807c215019aSStefano Zampini 4808c215019aSStefano Zampini THRUSTARRAY *w = NULL; 4809c215019aSStefano Zampini thrust::device_ptr<PetscScalar> dv; 4810c215019aSStefano Zampini if (dmem) { 4811c215019aSStefano Zampini dv = thrust::device_pointer_cast(v); 4812c215019aSStefano Zampini } else { 4813c215019aSStefano Zampini w = new THRUSTARRAY(n); 4814c215019aSStefano Zampini dv = w->data(); 4815c215019aSStefano Zampini } 4816c215019aSStefano Zampini thrust::device_ptr<const PetscScalar> dav = thrust::device_pointer_cast(av); 4817c215019aSStefano Zampini 4818c215019aSStefano Zampini auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(dav,widx.begin()),dv)); 4819c215019aSStefano Zampini auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(dav,widx.end()),dv+n)); 4820c215019aSStefano Zampini thrust::for_each(zibit,zieit,VecCUDAEquals()); 4821c215019aSStefano Zampini if (w) { 4822c215019aSStefano Zampini cerr = cudaMemcpy(v,w->data().get(),n*sizeof(PetscScalar),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4823c215019aSStefano Zampini } 4824c215019aSStefano Zampini delete w; 4825c215019aSStefano Zampini } else { 4826c215019aSStefano Zampini cerr = cudaMemcpy(v,av,n*sizeof(PetscScalar),dmem ? cudaMemcpyDeviceToDevice : cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4827c215019aSStefano Zampini } 4828c215019aSStefano Zampini if (!dmem) { ierr = PetscLogCpuToGpu(n*sizeof(PetscScalar));CHKERRQ(ierr); } 4829c215019aSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArrayRead(A,&av);CHKERRQ(ierr); 4830c215019aSStefano Zampini PetscFunctionReturn(0); 4831c215019aSStefano Zampini } 4832