19ae82921SPaul Mullowney /* 29ae82921SPaul Mullowney Defines the basic matrix operations for the AIJ (compressed row) 3fd7c363cSSatish Balay matrix storage format using the CUSPARSE library, 49ae82921SPaul Mullowney */ 5dced61a5SBarry Smith #define PETSC_SKIP_SPINLOCK 699acd6aaSStefano Zampini #define PETSC_SKIP_IMMINTRIN_H_CUDAWORKAROUND 1 79ae82921SPaul Mullowney 83d13b8fdSMatthew G. Knepley #include <petscconf.h> 93d13b8fdSMatthew G. Knepley #include <../src/mat/impls/aij/seq/aij.h> /*I "petscmat.h" I*/ 10087f3262SPaul Mullowney #include <../src/mat/impls/sbaij/seq/sbaij.h> 113d13b8fdSMatthew G. Knepley #include <../src/vec/vec/impls/dvecimpl.h> 12af0996ceSBarry Smith #include <petsc/private/vecimpl.h> 139ae82921SPaul Mullowney #undef VecType 143d13b8fdSMatthew G. Knepley #include <../src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h> 15a0e72f99SJunchao Zhang #include <thrust/async/for_each.h> 16e8d2b73aSMark Adams 17e057df02SPaul Mullowney const char *const MatCUSPARSEStorageFormats[] = {"CSR","ELL","HYB","MatCUSPARSEStorageFormat","MAT_CUSPARSE_",0}; 18afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 19afb2bd1cSJunchao Zhang /* The following are copied from cusparse.h in CUDA-11.0. In MatCUSPARSESpMVAlgorithms[] etc, we copy them in 20afb2bd1cSJunchao Zhang 0-based integer value order, since we want to use PetscOptionsEnum() to parse user command line options for them. 21afb2bd1cSJunchao Zhang 22afb2bd1cSJunchao Zhang typedef enum { 23afb2bd1cSJunchao Zhang CUSPARSE_MV_ALG_DEFAULT = 0, 24afb2bd1cSJunchao Zhang CUSPARSE_COOMV_ALG = 1, 25afb2bd1cSJunchao Zhang CUSPARSE_CSRMV_ALG1 = 2, 26afb2bd1cSJunchao Zhang CUSPARSE_CSRMV_ALG2 = 3 27afb2bd1cSJunchao Zhang } cusparseSpMVAlg_t; 28afb2bd1cSJunchao Zhang 29afb2bd1cSJunchao Zhang typedef enum { 30afb2bd1cSJunchao Zhang CUSPARSE_MM_ALG_DEFAULT CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_ALG_DEFAULT) = 0, 31afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG1 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG1) = 1, 32afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG2 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG2) = 2, 33afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG3 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG3) = 3, 34afb2bd1cSJunchao Zhang CUSPARSE_CSRMM_ALG1 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_CSR_ALG1) = 4, 35afb2bd1cSJunchao Zhang CUSPARSE_SPMM_ALG_DEFAULT = 0, 36afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG1 = 1, 37afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG2 = 2, 38afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG3 = 3, 39afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG4 = 5, 40afb2bd1cSJunchao Zhang CUSPARSE_SPMM_CSR_ALG1 = 4, 41afb2bd1cSJunchao Zhang CUSPARSE_SPMM_CSR_ALG2 = 6, 42afb2bd1cSJunchao Zhang } cusparseSpMMAlg_t; 43afb2bd1cSJunchao Zhang 44afb2bd1cSJunchao Zhang typedef enum { 45afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG1 = 1, // faster than V2 (in general), deterministc 46afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG2 = 2 // low memory requirement, non-deterministc 47afb2bd1cSJunchao Zhang } cusparseCsr2CscAlg_t; 48afb2bd1cSJunchao Zhang */ 49afb2bd1cSJunchao Zhang const char *const MatCUSPARSESpMVAlgorithms[] = {"MV_ALG_DEFAULT","COOMV_ALG", "CSRMV_ALG1","CSRMV_ALG2", "cusparseSpMVAlg_t","CUSPARSE_",0}; 50afb2bd1cSJunchao Zhang const char *const MatCUSPARSESpMMAlgorithms[] = {"ALG_DEFAULT","COO_ALG1","COO_ALG2","COO_ALG3","CSR_ALG1","COO_ALG4","CSR_ALG2","cusparseSpMMAlg_t","CUSPARSE_SPMM_",0}; 51afb2bd1cSJunchao Zhang const char *const MatCUSPARSECsr2CscAlgorithms[] = {"INVALID"/*cusparse does not have enum 0! We created one*/,"ALG1","ALG2","cusparseCsr2CscAlg_t","CUSPARSE_CSR2CSC_",0}; 52afb2bd1cSJunchao Zhang #endif 539ae82921SPaul Mullowney 54087f3262SPaul Mullowney static PetscErrorCode MatICCFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,const MatFactorInfo*); 55087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,const MatFactorInfo*); 56087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorNumeric_SeqAIJCUSPARSE(Mat,Mat,const MatFactorInfo*); 57087f3262SPaul Mullowney 586fa9248bSJed Brown static PetscErrorCode MatILUFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,IS,const MatFactorInfo*); 596fa9248bSJed Brown static PetscErrorCode MatLUFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,IS,const MatFactorInfo*); 606fa9248bSJed Brown static PetscErrorCode MatLUFactorNumeric_SeqAIJCUSPARSE(Mat,Mat,const MatFactorInfo*); 61087f3262SPaul Mullowney 626fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE(Mat,Vec,Vec); 636fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE_NaturalOrdering(Mat,Vec,Vec); 646fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE(Mat,Vec,Vec); 656fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering(Mat,Vec,Vec); 664416b707SBarry Smith static PetscErrorCode MatSetFromOptions_SeqAIJCUSPARSE(PetscOptionItems *PetscOptionsObject,Mat); 67a587d139SMark static PetscErrorCode MatAXPY_SeqAIJCUSPARSE(Mat,PetscScalar,Mat,MatStructure); 6833c9ba73SStefano Zampini static PetscErrorCode MatScale_SeqAIJCUSPARSE(Mat,PetscScalar); 696fa9248bSJed Brown static PetscErrorCode MatMult_SeqAIJCUSPARSE(Mat,Vec,Vec); 706fa9248bSJed Brown static PetscErrorCode MatMultAdd_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec); 716fa9248bSJed Brown static PetscErrorCode MatMultTranspose_SeqAIJCUSPARSE(Mat,Vec,Vec); 726fa9248bSJed Brown static PetscErrorCode MatMultTransposeAdd_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec); 73e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTranspose_SeqAIJCUSPARSE(Mat,Vec,Vec); 74e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTransposeAdd_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec); 75e6e9a74fSStefano Zampini static PetscErrorCode MatMultAddKernel_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec,PetscBool,PetscBool); 769ae82921SPaul Mullowney 777f756511SDominic Meiser static PetscErrorCode CsrMatrix_Destroy(CsrMatrix**); 78470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSETriFactorStruct**); 79470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSEMultStruct**,MatCUSPARSEStorageFormat); 80470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSETriFactors_Destroy(Mat_SeqAIJCUSPARSETriFactors**); 81470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSE_Destroy(Mat_SeqAIJCUSPARSE**); 827f756511SDominic Meiser 8357181aedSStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSECopyToGPU(Mat); 8457181aedSStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSECopyFromGPU(Mat); 85a49f1ed0SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSEInvalidateTranspose(Mat,PetscBool); 8657181aedSStefano Zampini 877e8381f9SStefano Zampini PETSC_INTERN PetscErrorCode MatSetPreallocationCOO_SeqAIJCUSPARSE(Mat,PetscInt,const PetscInt[],const PetscInt[]); 887e8381f9SStefano Zampini PETSC_INTERN PetscErrorCode MatSetValuesCOO_SeqAIJCUSPARSE(Mat,const PetscScalar[],InsertMode); 897e8381f9SStefano Zampini 90c215019aSStefano Zampini static PetscErrorCode MatSeqAIJCopySubArray_SeqAIJCUSPARSE(Mat,PetscInt,const PetscInt[],PetscScalar[]); 91c215019aSStefano Zampini 92b06137fdSPaul Mullowney PetscErrorCode MatCUSPARSESetStream(Mat A,const cudaStream_t stream) 93b06137fdSPaul Mullowney { 94b06137fdSPaul Mullowney cusparseStatus_t stat; 95b06137fdSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 96b06137fdSPaul Mullowney 97b06137fdSPaul Mullowney PetscFunctionBegin; 98d98d7c49SStefano Zampini if (!cusparsestruct) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing spptr"); 99b06137fdSPaul Mullowney cusparsestruct->stream = stream; 10057d48284SJunchao Zhang stat = cusparseSetStream(cusparsestruct->handle,cusparsestruct->stream);CHKERRCUSPARSE(stat); 101b06137fdSPaul Mullowney PetscFunctionReturn(0); 102b06137fdSPaul Mullowney } 103b06137fdSPaul Mullowney 104b06137fdSPaul Mullowney PetscErrorCode MatCUSPARSESetHandle(Mat A,const cusparseHandle_t handle) 105b06137fdSPaul Mullowney { 106b06137fdSPaul Mullowney cusparseStatus_t stat; 107b06137fdSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 108b06137fdSPaul Mullowney 109b06137fdSPaul Mullowney PetscFunctionBegin; 110d98d7c49SStefano Zampini if (!cusparsestruct) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing spptr"); 1116b1cf21dSAlejandro Lamas Daviña if (cusparsestruct->handle != handle) { 11216a2e217SAlejandro Lamas Daviña if (cusparsestruct->handle) { 11357d48284SJunchao Zhang stat = cusparseDestroy(cusparsestruct->handle);CHKERRCUSPARSE(stat); 11416a2e217SAlejandro Lamas Daviña } 115b06137fdSPaul Mullowney cusparsestruct->handle = handle; 1166b1cf21dSAlejandro Lamas Daviña } 11757d48284SJunchao Zhang stat = cusparseSetPointerMode(cusparsestruct->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 118b06137fdSPaul Mullowney PetscFunctionReturn(0); 119b06137fdSPaul Mullowney } 120b06137fdSPaul Mullowney 121b06137fdSPaul Mullowney PetscErrorCode MatCUSPARSEClearHandle(Mat A) 122b06137fdSPaul Mullowney { 123b06137fdSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 1247e8381f9SStefano Zampini PetscBool flg; 1257e8381f9SStefano Zampini PetscErrorCode ierr; 126ccdfe979SStefano Zampini 127b06137fdSPaul Mullowney PetscFunctionBegin; 1287e8381f9SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 1297e8381f9SStefano Zampini if (!flg || !cusparsestruct) PetscFunctionReturn(0); 130ccdfe979SStefano Zampini if (cusparsestruct->handle) cusparsestruct->handle = 0; 131b06137fdSPaul Mullowney PetscFunctionReturn(0); 132b06137fdSPaul Mullowney } 133b06137fdSPaul Mullowney 134ea799195SBarry Smith PetscErrorCode MatFactorGetSolverType_seqaij_cusparse(Mat A,MatSolverType *type) 1359ae82921SPaul Mullowney { 1369ae82921SPaul Mullowney PetscFunctionBegin; 1379ae82921SPaul Mullowney *type = MATSOLVERCUSPARSE; 1389ae82921SPaul Mullowney PetscFunctionReturn(0); 1399ae82921SPaul Mullowney } 1409ae82921SPaul Mullowney 141c708e6cdSJed Brown /*MC 142087f3262SPaul Mullowney MATSOLVERCUSPARSE = "cusparse" - A matrix type providing triangular solvers for seq matrices 143087f3262SPaul Mullowney on a single GPU of type, seqaijcusparse, aijcusparse, or seqaijcusp, aijcusp. Currently supported 144087f3262SPaul Mullowney algorithms are ILU(k) and ICC(k). Typically, deeper factorizations (larger k) results in poorer 145087f3262SPaul Mullowney performance in the triangular solves. Full LU, and Cholesky decompositions can be solved through the 146087f3262SPaul Mullowney CUSPARSE triangular solve algorithm. However, the performance can be quite poor and thus these 147087f3262SPaul Mullowney algorithms are not recommended. This class does NOT support direct solver operations. 148c708e6cdSJed Brown 1499ae82921SPaul Mullowney Level: beginner 150c708e6cdSJed Brown 1513ca39a21SBarry Smith .seealso: PCFactorSetMatSolverType(), MatSolverType, MatCreateSeqAIJCUSPARSE(), MATAIJCUSPARSE, MatCreateAIJCUSPARSE(), MatCUSPARSESetFormat(), MatCUSPARSEStorageFormat, MatCUSPARSEFormatOperation 152c708e6cdSJed Brown M*/ 1539ae82921SPaul Mullowney 15442c9c57cSBarry Smith PETSC_EXTERN PetscErrorCode MatGetFactor_seqaijcusparse_cusparse(Mat A,MatFactorType ftype,Mat *B) 1559ae82921SPaul Mullowney { 1569ae82921SPaul Mullowney PetscErrorCode ierr; 157bc3f50f2SPaul Mullowney PetscInt n = A->rmap->n; 1589ae82921SPaul Mullowney 1599ae82921SPaul Mullowney PetscFunctionBegin; 160bc3f50f2SPaul Mullowney ierr = MatCreate(PetscObjectComm((PetscObject)A),B);CHKERRQ(ierr); 161bc3f50f2SPaul Mullowney ierr = MatSetSizes(*B,n,n,n,n);CHKERRQ(ierr); 1622c7c0729SBarry Smith (*B)->factortype = ftype; 1639ae82921SPaul Mullowney ierr = MatSetType(*B,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 1642205254eSKarl Rupp 165087f3262SPaul Mullowney if (ftype == MAT_FACTOR_LU || ftype == MAT_FACTOR_ILU || ftype == MAT_FACTOR_ILUDT) { 16633d57670SJed Brown ierr = MatSetBlockSizesFromMats(*B,A,A);CHKERRQ(ierr); 1679ae82921SPaul Mullowney (*B)->ops->ilufactorsymbolic = MatILUFactorSymbolic_SeqAIJCUSPARSE; 1689ae82921SPaul Mullowney (*B)->ops->lufactorsymbolic = MatLUFactorSymbolic_SeqAIJCUSPARSE; 1694ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGND,(char**)&(*B)->preferredordering[MAT_FACTOR_LU]);CHKERRQ(ierr); 1704ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGNATURAL,(char**)&(*B)->preferredordering[MAT_FACTOR_ILU]);CHKERRQ(ierr); 1714ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGNATURAL,(char**)&(*B)->preferredordering[MAT_FACTOR_ILUDT]);CHKERRQ(ierr); 172087f3262SPaul Mullowney } else if (ftype == MAT_FACTOR_CHOLESKY || ftype == MAT_FACTOR_ICC) { 173087f3262SPaul Mullowney (*B)->ops->iccfactorsymbolic = MatICCFactorSymbolic_SeqAIJCUSPARSE; 174087f3262SPaul Mullowney (*B)->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SeqAIJCUSPARSE; 1754ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGND,(char**)&(*B)->preferredordering[MAT_FACTOR_CHOLESKY]);CHKERRQ(ierr); 1764ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGNATURAL,(char**)&(*B)->preferredordering[MAT_FACTOR_ICC]);CHKERRQ(ierr); 1779ae82921SPaul Mullowney } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Factor type not supported for CUSPARSE Matrix Types"); 178bc3f50f2SPaul Mullowney 179fa03d054SJed Brown ierr = MatSeqAIJSetPreallocation(*B,MAT_SKIP_ALLOCATION,NULL);CHKERRQ(ierr); 1804ac6704cSBarry Smith (*B)->canuseordering = PETSC_TRUE; 1813ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)(*B),"MatFactorGetSolverType_C",MatFactorGetSolverType_seqaij_cusparse);CHKERRQ(ierr); 1829ae82921SPaul Mullowney PetscFunctionReturn(0); 1839ae82921SPaul Mullowney } 1849ae82921SPaul Mullowney 185bc3f50f2SPaul Mullowney PETSC_INTERN PetscErrorCode MatCUSPARSESetFormat_SeqAIJCUSPARSE(Mat A,MatCUSPARSEFormatOperation op,MatCUSPARSEStorageFormat format) 186ca45077fSPaul Mullowney { 187aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 1886e111a19SKarl Rupp 189ca45077fSPaul Mullowney PetscFunctionBegin; 190ca45077fSPaul Mullowney switch (op) { 191e057df02SPaul Mullowney case MAT_CUSPARSE_MULT: 192aa372e3fSPaul Mullowney cusparsestruct->format = format; 193ca45077fSPaul Mullowney break; 194e057df02SPaul Mullowney case MAT_CUSPARSE_ALL: 195aa372e3fSPaul Mullowney cusparsestruct->format = format; 196ca45077fSPaul Mullowney break; 197ca45077fSPaul Mullowney default: 19836d62e41SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"unsupported operation %d for MatCUSPARSEFormatOperation. MAT_CUSPARSE_MULT and MAT_CUSPARSE_ALL are currently supported.",op); 199ca45077fSPaul Mullowney } 200ca45077fSPaul Mullowney PetscFunctionReturn(0); 201ca45077fSPaul Mullowney } 2029ae82921SPaul Mullowney 203e057df02SPaul Mullowney /*@ 204e057df02SPaul Mullowney MatCUSPARSESetFormat - Sets the storage format of CUSPARSE matrices for a particular 205e057df02SPaul Mullowney operation. Only the MatMult operation can use different GPU storage formats 206aa372e3fSPaul Mullowney for MPIAIJCUSPARSE matrices. 207e057df02SPaul Mullowney Not Collective 208e057df02SPaul Mullowney 209e057df02SPaul Mullowney Input Parameters: 2108468deeeSKarl Rupp + A - Matrix of type SEQAIJCUSPARSE 21136d62e41SPaul Mullowney . op - MatCUSPARSEFormatOperation. SEQAIJCUSPARSE matrices support MAT_CUSPARSE_MULT and MAT_CUSPARSE_ALL. MPIAIJCUSPARSE matrices support MAT_CUSPARSE_MULT_DIAG, MAT_CUSPARSE_MULT_OFFDIAG, and MAT_CUSPARSE_ALL. 2122692e278SPaul Mullowney - format - MatCUSPARSEStorageFormat (one of MAT_CUSPARSE_CSR, MAT_CUSPARSE_ELL, MAT_CUSPARSE_HYB. The latter two require CUDA 4.2) 213e057df02SPaul Mullowney 214e057df02SPaul Mullowney Output Parameter: 215e057df02SPaul Mullowney 216e057df02SPaul Mullowney Level: intermediate 217e057df02SPaul Mullowney 2188468deeeSKarl Rupp .seealso: MatCUSPARSEStorageFormat, MatCUSPARSEFormatOperation 219e057df02SPaul Mullowney @*/ 220e057df02SPaul Mullowney PetscErrorCode MatCUSPARSESetFormat(Mat A,MatCUSPARSEFormatOperation op,MatCUSPARSEStorageFormat format) 221e057df02SPaul Mullowney { 222e057df02SPaul Mullowney PetscErrorCode ierr; 2236e111a19SKarl Rupp 224e057df02SPaul Mullowney PetscFunctionBegin; 225e057df02SPaul Mullowney PetscValidHeaderSpecific(A, MAT_CLASSID,1); 226e057df02SPaul Mullowney ierr = PetscTryMethod(A,"MatCUSPARSESetFormat_C",(Mat,MatCUSPARSEFormatOperation,MatCUSPARSEStorageFormat),(A,op,format));CHKERRQ(ierr); 227e057df02SPaul Mullowney PetscFunctionReturn(0); 228e057df02SPaul Mullowney } 229e057df02SPaul Mullowney 2301a2c6b5cSJunchao Zhang PetscErrorCode MatSetOption_SeqAIJCUSPARSE(Mat A,MatOption op,PetscBool flg) 231e6e9a74fSStefano Zampini { 232e6e9a74fSStefano Zampini PetscErrorCode ierr; 233e6e9a74fSStefano Zampini 234e6e9a74fSStefano Zampini PetscFunctionBegin; 2351a2c6b5cSJunchao Zhang switch (op) { 2361a2c6b5cSJunchao Zhang case MAT_FORM_EXPLICIT_TRANSPOSE: 2371a2c6b5cSJunchao Zhang /* need to destroy the transpose matrix if present to prevent from logic errors if flg is set to true later */ 2381a2c6b5cSJunchao Zhang if (A->form_explicit_transpose && !flg) {ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr);} 2391a2c6b5cSJunchao Zhang A->form_explicit_transpose = flg; 2401a2c6b5cSJunchao Zhang break; 2411a2c6b5cSJunchao Zhang default: 2421a2c6b5cSJunchao Zhang ierr = MatSetOption_SeqAIJ(A,op,flg);CHKERRQ(ierr); 2431a2c6b5cSJunchao Zhang break; 244e6e9a74fSStefano Zampini } 245e6e9a74fSStefano Zampini PetscFunctionReturn(0); 246e6e9a74fSStefano Zampini } 247e6e9a74fSStefano Zampini 248bddcd29dSMark Adams static PetscErrorCode MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(Mat A); 249bddcd29dSMark Adams 250bddcd29dSMark Adams static PetscErrorCode MatLUFactorNumeric_SeqAIJCUSPARSE(Mat B,Mat A,const MatFactorInfo *info) 251bddcd29dSMark Adams { 252bddcd29dSMark Adams Mat_SeqAIJ *b = (Mat_SeqAIJ*)B->data; 253bddcd29dSMark Adams IS isrow = b->row,iscol = b->col; 254bddcd29dSMark Adams PetscBool row_identity,col_identity; 255bddcd29dSMark Adams PetscErrorCode ierr; 256bddcd29dSMark Adams 257bddcd29dSMark Adams PetscFunctionBegin; 258bddcd29dSMark Adams ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 259bddcd29dSMark Adams ierr = MatLUFactorNumeric_SeqAIJ(B,A,info);CHKERRQ(ierr); 260bddcd29dSMark Adams B->offloadmask = PETSC_OFFLOAD_CPU; 261bddcd29dSMark Adams /* determine which version of MatSolve needs to be used. */ 262bddcd29dSMark Adams ierr = ISIdentity(isrow,&row_identity);CHKERRQ(ierr); 263bddcd29dSMark Adams ierr = ISIdentity(iscol,&col_identity);CHKERRQ(ierr); 264bddcd29dSMark Adams if (row_identity && col_identity) { 265bddcd29dSMark Adams B->ops->solve = MatSolve_SeqAIJCUSPARSE_NaturalOrdering; 266bddcd29dSMark Adams B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering; 267bddcd29dSMark Adams B->ops->matsolve = NULL; 268bddcd29dSMark Adams B->ops->matsolvetranspose = NULL; 269bddcd29dSMark Adams } else { 270bddcd29dSMark Adams B->ops->solve = MatSolve_SeqAIJCUSPARSE; 271bddcd29dSMark Adams B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE; 272bddcd29dSMark Adams B->ops->matsolve = NULL; 273bddcd29dSMark Adams B->ops->matsolvetranspose = NULL; 274bddcd29dSMark Adams } 275bddcd29dSMark Adams 276bddcd29dSMark Adams /* get the triangular factors */ 277bddcd29dSMark Adams ierr = MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(B);CHKERRQ(ierr); 278bddcd29dSMark Adams PetscFunctionReturn(0); 279bddcd29dSMark Adams } 280bddcd29dSMark Adams 2814416b707SBarry Smith static PetscErrorCode MatSetFromOptions_SeqAIJCUSPARSE(PetscOptionItems *PetscOptionsObject,Mat A) 2829ae82921SPaul Mullowney { 2839ae82921SPaul Mullowney PetscErrorCode ierr; 284e057df02SPaul Mullowney MatCUSPARSEStorageFormat format; 2859ae82921SPaul Mullowney PetscBool flg; 286a183c035SDominic Meiser Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 2876e111a19SKarl Rupp 2889ae82921SPaul Mullowney PetscFunctionBegin; 289e55864a3SBarry Smith ierr = PetscOptionsHead(PetscOptionsObject,"SeqAIJCUSPARSE options");CHKERRQ(ierr); 2909ae82921SPaul Mullowney if (A->factortype == MAT_FACTOR_NONE) { 291e057df02SPaul Mullowney ierr = PetscOptionsEnum("-mat_cusparse_mult_storage_format","sets storage format of (seq)aijcusparse gpu matrices for SpMV", 292a183c035SDominic Meiser "MatCUSPARSESetFormat",MatCUSPARSEStorageFormats,(PetscEnum)cusparsestruct->format,(PetscEnum*)&format,&flg);CHKERRQ(ierr); 293afb2bd1cSJunchao Zhang if (flg) {ierr = MatCUSPARSESetFormat(A,MAT_CUSPARSE_MULT,format);CHKERRQ(ierr);} 294afb2bd1cSJunchao Zhang 2954c87dfd4SPaul Mullowney ierr = PetscOptionsEnum("-mat_cusparse_storage_format","sets storage format of (seq)aijcusparse gpu matrices for SpMV and TriSolve", 296a183c035SDominic Meiser "MatCUSPARSESetFormat",MatCUSPARSEStorageFormats,(PetscEnum)cusparsestruct->format,(PetscEnum*)&format,&flg);CHKERRQ(ierr); 297afb2bd1cSJunchao Zhang if (flg) {ierr = MatCUSPARSESetFormat(A,MAT_CUSPARSE_ALL,format);CHKERRQ(ierr);} 298afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 299afb2bd1cSJunchao Zhang ierr = PetscOptionsEnum("-mat_cusparse_spmv_alg","sets cuSPARSE algorithm used in sparse-mat dense-vector multiplication (SpMV)", 300afb2bd1cSJunchao Zhang "cusparseSpMVAlg_t",MatCUSPARSESpMVAlgorithms,(PetscEnum)cusparsestruct->spmvAlg,(PetscEnum*)&cusparsestruct->spmvAlg,&flg);CHKERRQ(ierr); 301afb2bd1cSJunchao Zhang /* If user did use this option, check its consistency with cuSPARSE, since PetscOptionsEnum() sets enum values based on their position in MatCUSPARSESpMVAlgorithms[] */ 302afb2bd1cSJunchao Zhang if (flg && CUSPARSE_CSRMV_ALG1 != 2) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseSpMVAlg_t has been changed but PETSc has not been updated accordingly"); 303afb2bd1cSJunchao Zhang 304afb2bd1cSJunchao Zhang ierr = PetscOptionsEnum("-mat_cusparse_spmm_alg","sets cuSPARSE algorithm used in sparse-mat dense-mat multiplication (SpMM)", 305afb2bd1cSJunchao Zhang "cusparseSpMMAlg_t",MatCUSPARSESpMMAlgorithms,(PetscEnum)cusparsestruct->spmmAlg,(PetscEnum*)&cusparsestruct->spmmAlg,&flg);CHKERRQ(ierr); 306afb2bd1cSJunchao Zhang if (flg && CUSPARSE_SPMM_CSR_ALG1 != 4) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseSpMMAlg_t has been changed but PETSc has not been updated accordingly"); 307afb2bd1cSJunchao Zhang 308afb2bd1cSJunchao Zhang ierr = PetscOptionsEnum("-mat_cusparse_csr2csc_alg","sets cuSPARSE algorithm used in converting CSR matrices to CSC matrices", 309afb2bd1cSJunchao Zhang "cusparseCsr2CscAlg_t",MatCUSPARSECsr2CscAlgorithms,(PetscEnum)cusparsestruct->csr2cscAlg,(PetscEnum*)&cusparsestruct->csr2cscAlg,&flg);CHKERRQ(ierr); 310afb2bd1cSJunchao Zhang if (flg && CUSPARSE_CSR2CSC_ALG1 != 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseCsr2CscAlg_t has been changed but PETSc has not been updated accordingly"); 311afb2bd1cSJunchao Zhang #endif 3124c87dfd4SPaul Mullowney } 3130af67c1bSStefano Zampini ierr = PetscOptionsTail();CHKERRQ(ierr); 3149ae82921SPaul Mullowney PetscFunctionReturn(0); 3159ae82921SPaul Mullowney } 3169ae82921SPaul Mullowney 3176fa9248bSJed Brown static PetscErrorCode MatILUFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS isrow,IS iscol,const MatFactorInfo *info) 3189ae82921SPaul Mullowney { 319da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 3209ae82921SPaul Mullowney PetscErrorCode ierr; 3219ae82921SPaul Mullowney 3229ae82921SPaul Mullowney PetscFunctionBegin; 323da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 3249ae82921SPaul Mullowney ierr = MatILUFactorSymbolic_SeqAIJ(B,A,isrow,iscol,info);CHKERRQ(ierr); 3259ae82921SPaul Mullowney B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJCUSPARSE; 3269ae82921SPaul Mullowney PetscFunctionReturn(0); 3279ae82921SPaul Mullowney } 3289ae82921SPaul Mullowney 3296fa9248bSJed Brown static PetscErrorCode MatLUFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS isrow,IS iscol,const MatFactorInfo *info) 3309ae82921SPaul Mullowney { 331da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 3329ae82921SPaul Mullowney PetscErrorCode ierr; 3339ae82921SPaul Mullowney 3349ae82921SPaul Mullowney PetscFunctionBegin; 335da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 3369ae82921SPaul Mullowney ierr = MatLUFactorSymbolic_SeqAIJ(B,A,isrow,iscol,info);CHKERRQ(ierr); 3379ae82921SPaul Mullowney B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJCUSPARSE; 3389ae82921SPaul Mullowney PetscFunctionReturn(0); 3399ae82921SPaul Mullowney } 3409ae82921SPaul Mullowney 341087f3262SPaul Mullowney static PetscErrorCode MatICCFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS perm,const MatFactorInfo *info) 342087f3262SPaul Mullowney { 343da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 344087f3262SPaul Mullowney PetscErrorCode ierr; 345087f3262SPaul Mullowney 346087f3262SPaul Mullowney PetscFunctionBegin; 347da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 348087f3262SPaul Mullowney ierr = MatICCFactorSymbolic_SeqAIJ(B,A,perm,info);CHKERRQ(ierr); 349087f3262SPaul Mullowney B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJCUSPARSE; 350087f3262SPaul Mullowney PetscFunctionReturn(0); 351087f3262SPaul Mullowney } 352087f3262SPaul Mullowney 353087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS perm,const MatFactorInfo *info) 354087f3262SPaul Mullowney { 355da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 356087f3262SPaul Mullowney PetscErrorCode ierr; 357087f3262SPaul Mullowney 358087f3262SPaul Mullowney PetscFunctionBegin; 359da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 360087f3262SPaul Mullowney ierr = MatCholeskyFactorSymbolic_SeqAIJ(B,A,perm,info);CHKERRQ(ierr); 361087f3262SPaul Mullowney B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJCUSPARSE; 362087f3262SPaul Mullowney PetscFunctionReturn(0); 363087f3262SPaul Mullowney } 364087f3262SPaul Mullowney 365087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEBuildILULowerTriMatrix(Mat A) 3669ae82921SPaul Mullowney { 3679ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 3689ae82921SPaul Mullowney PetscInt n = A->rmap->n; 3699ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 370aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 3719ae82921SPaul Mullowney cusparseStatus_t stat; 3729ae82921SPaul Mullowney const PetscInt *ai = a->i,*aj = a->j,*vi; 3739ae82921SPaul Mullowney const MatScalar *aa = a->a,*v; 3749ae82921SPaul Mullowney PetscInt *AiLo, *AjLo; 3759ae82921SPaul Mullowney PetscInt i,nz, nzLower, offset, rowOffset; 376b175d8bbSPaul Mullowney PetscErrorCode ierr; 37757d48284SJunchao Zhang cudaError_t cerr; 3789ae82921SPaul Mullowney 3799ae82921SPaul Mullowney PetscFunctionBegin; 380cf00fe3bSKarl Rupp if (!n) PetscFunctionReturn(0); 381c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 3829ae82921SPaul Mullowney try { 3839ae82921SPaul Mullowney /* first figure out the number of nonzeros in the lower triangular matrix including 1's on the diagonal. */ 3849ae82921SPaul Mullowney nzLower=n+ai[n]-ai[1]; 385da79fbbcSStefano Zampini if (!loTriFactor) { 3862cbc15d9SMark PetscScalar *AALo; 3872cbc15d9SMark 3882cbc15d9SMark cerr = cudaMallocHost((void**) &AALo, nzLower*sizeof(PetscScalar));CHKERRCUDA(cerr); 3899ae82921SPaul Mullowney 3909ae82921SPaul Mullowney /* Allocate Space for the lower triangular matrix */ 39157d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AiLo, (n+1)*sizeof(PetscInt));CHKERRCUDA(cerr); 39257d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AjLo, nzLower*sizeof(PetscInt));CHKERRCUDA(cerr); 3939ae82921SPaul Mullowney 3949ae82921SPaul Mullowney /* Fill the lower triangular matrix */ 3959ae82921SPaul Mullowney AiLo[0] = (PetscInt) 0; 3969ae82921SPaul Mullowney AiLo[n] = nzLower; 3979ae82921SPaul Mullowney AjLo[0] = (PetscInt) 0; 3989ae82921SPaul Mullowney AALo[0] = (MatScalar) 1.0; 3999ae82921SPaul Mullowney v = aa; 4009ae82921SPaul Mullowney vi = aj; 4019ae82921SPaul Mullowney offset = 1; 4029ae82921SPaul Mullowney rowOffset= 1; 4039ae82921SPaul Mullowney for (i=1; i<n; i++) { 4049ae82921SPaul Mullowney nz = ai[i+1] - ai[i]; 405e057df02SPaul Mullowney /* additional 1 for the term on the diagonal */ 4069ae82921SPaul Mullowney AiLo[i] = rowOffset; 4079ae82921SPaul Mullowney rowOffset += nz+1; 4089ae82921SPaul Mullowney 409580bdb30SBarry Smith ierr = PetscArraycpy(&(AjLo[offset]), vi, nz);CHKERRQ(ierr); 410580bdb30SBarry Smith ierr = PetscArraycpy(&(AALo[offset]), v, nz);CHKERRQ(ierr); 4119ae82921SPaul Mullowney 4129ae82921SPaul Mullowney offset += nz; 4139ae82921SPaul Mullowney AjLo[offset] = (PetscInt) i; 4149ae82921SPaul Mullowney AALo[offset] = (MatScalar) 1.0; 4159ae82921SPaul Mullowney offset += 1; 4169ae82921SPaul Mullowney 4179ae82921SPaul Mullowney v += nz; 4189ae82921SPaul Mullowney vi += nz; 4199ae82921SPaul Mullowney } 4202205254eSKarl Rupp 421aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 422da79fbbcSStefano Zampini ierr = PetscNew(&loTriFactor);CHKERRQ(ierr); 423da79fbbcSStefano Zampini loTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 424aa372e3fSPaul Mullowney /* Create the matrix description */ 42557d48284SJunchao Zhang stat = cusparseCreateMatDescr(&loTriFactor->descr);CHKERRCUSPARSE(stat); 42657d48284SJunchao Zhang stat = cusparseSetMatIndexBase(loTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 4271b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 428afb2bd1cSJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 429afb2bd1cSJunchao Zhang #else 43057d48284SJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 431afb2bd1cSJunchao Zhang #endif 43257d48284SJunchao Zhang stat = cusparseSetMatFillMode(loTriFactor->descr, CUSPARSE_FILL_MODE_LOWER);CHKERRCUSPARSE(stat); 43357d48284SJunchao Zhang stat = cusparseSetMatDiagType(loTriFactor->descr, CUSPARSE_DIAG_TYPE_UNIT);CHKERRCUSPARSE(stat); 434aa372e3fSPaul Mullowney 435aa372e3fSPaul Mullowney /* set the operation */ 436aa372e3fSPaul Mullowney loTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 437aa372e3fSPaul Mullowney 438aa372e3fSPaul Mullowney /* set the matrix */ 439aa372e3fSPaul Mullowney loTriFactor->csrMat = new CsrMatrix; 440aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows = n; 441aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols = n; 442aa372e3fSPaul Mullowney loTriFactor->csrMat->num_entries = nzLower; 443aa372e3fSPaul Mullowney 444aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(n+1); 445aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->assign(AiLo, AiLo+n+1); 446aa372e3fSPaul Mullowney 447aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(nzLower); 448aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->assign(AjLo, AjLo+nzLower); 449aa372e3fSPaul Mullowney 450aa372e3fSPaul Mullowney loTriFactor->csrMat->values = new THRUSTARRAY(nzLower); 451aa372e3fSPaul Mullowney loTriFactor->csrMat->values->assign(AALo, AALo+nzLower); 452aa372e3fSPaul Mullowney 453afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 454da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 455afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&loTriFactor->solveInfo);CHKERRCUSPARSE(stat); 4561b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 457afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, loTriFactor->solveOp, 458afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 459afb2bd1cSJunchao Zhang loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 460afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo, 461afb2bd1cSJunchao Zhang &loTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 462afb2bd1cSJunchao Zhang cerr = cudaMalloc(&loTriFactor->solveBuffer,loTriFactor->solveBufferSize);CHKERRCUDA(cerr); 463afb2bd1cSJunchao Zhang #endif 464afb2bd1cSJunchao Zhang 465aa372e3fSPaul Mullowney /* perform the solve analysis */ 466aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, loTriFactor->solveOp, 467aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 468aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 469*d49cd2b7SBarry Smith loTriFactor->csrMat->column_indices->data().get(), 4701b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 471*d49cd2b7SBarry Smith loTriFactor->solveInfo, 472*d49cd2b7SBarry Smith loTriFactor->solvePolicy, loTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 473*d49cd2b7SBarry Smith #else 474*d49cd2b7SBarry Smith loTriFactor->solveInfo);CHKERRCUSPARSE(stat); 475afb2bd1cSJunchao Zhang #endif 476da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 477da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 478aa372e3fSPaul Mullowney 479da79fbbcSStefano Zampini /* assign the pointer */ 480aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->loTriFactorPtr = loTriFactor; 4812cbc15d9SMark loTriFactor->AA_h = AALo; 48257d48284SJunchao Zhang cerr = cudaFreeHost(AiLo);CHKERRCUDA(cerr); 48357d48284SJunchao Zhang cerr = cudaFreeHost(AjLo);CHKERRCUDA(cerr); 4844863603aSSatish Balay ierr = PetscLogCpuToGpu((n+1+nzLower)*sizeof(int)+nzLower*sizeof(PetscScalar));CHKERRQ(ierr); 485da79fbbcSStefano Zampini } else { /* update values only */ 4862cbc15d9SMark if (!loTriFactor->AA_h) { 4872cbc15d9SMark cerr = cudaMallocHost((void**) &loTriFactor->AA_h, nzLower*sizeof(PetscScalar));CHKERRCUDA(cerr); 4882cbc15d9SMark } 489da79fbbcSStefano Zampini /* Fill the lower triangular matrix */ 4902cbc15d9SMark loTriFactor->AA_h[0] = 1.0; 491da79fbbcSStefano Zampini v = aa; 492da79fbbcSStefano Zampini vi = aj; 493da79fbbcSStefano Zampini offset = 1; 494da79fbbcSStefano Zampini for (i=1; i<n; i++) { 495da79fbbcSStefano Zampini nz = ai[i+1] - ai[i]; 4962cbc15d9SMark ierr = PetscArraycpy(&(loTriFactor->AA_h[offset]), v, nz);CHKERRQ(ierr); 497da79fbbcSStefano Zampini offset += nz; 4982cbc15d9SMark loTriFactor->AA_h[offset] = 1.0; 499da79fbbcSStefano Zampini offset += 1; 500da79fbbcSStefano Zampini v += nz; 501da79fbbcSStefano Zampini } 5022cbc15d9SMark loTriFactor->csrMat->values->assign(loTriFactor->AA_h, loTriFactor->AA_h+nzLower); 503da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(nzLower*sizeof(PetscScalar));CHKERRQ(ierr); 504da79fbbcSStefano Zampini } 5059ae82921SPaul Mullowney } catch(char *ex) { 5069ae82921SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 5079ae82921SPaul Mullowney } 5089ae82921SPaul Mullowney } 5099ae82921SPaul Mullowney PetscFunctionReturn(0); 5109ae82921SPaul Mullowney } 5119ae82921SPaul Mullowney 512087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEBuildILUUpperTriMatrix(Mat A) 5139ae82921SPaul Mullowney { 5149ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 5159ae82921SPaul Mullowney PetscInt n = A->rmap->n; 5169ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 517aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 5189ae82921SPaul Mullowney cusparseStatus_t stat; 5199ae82921SPaul Mullowney const PetscInt *aj = a->j,*adiag = a->diag,*vi; 5209ae82921SPaul Mullowney const MatScalar *aa = a->a,*v; 5219ae82921SPaul Mullowney PetscInt *AiUp, *AjUp; 5229ae82921SPaul Mullowney PetscInt i,nz, nzUpper, offset; 5239ae82921SPaul Mullowney PetscErrorCode ierr; 52457d48284SJunchao Zhang cudaError_t cerr; 5259ae82921SPaul Mullowney 5269ae82921SPaul Mullowney PetscFunctionBegin; 527cf00fe3bSKarl Rupp if (!n) PetscFunctionReturn(0); 528c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 5299ae82921SPaul Mullowney try { 5309ae82921SPaul Mullowney /* next, figure out the number of nonzeros in the upper triangular matrix. */ 5319ae82921SPaul Mullowney nzUpper = adiag[0]-adiag[n]; 532da79fbbcSStefano Zampini if (!upTriFactor) { 5332cbc15d9SMark PetscScalar *AAUp; 5342cbc15d9SMark 5352cbc15d9SMark cerr = cudaMallocHost((void**) &AAUp, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 5362cbc15d9SMark 5379ae82921SPaul Mullowney /* Allocate Space for the upper triangular matrix */ 53857d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AiUp, (n+1)*sizeof(PetscInt));CHKERRCUDA(cerr); 53957d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AjUp, nzUpper*sizeof(PetscInt));CHKERRCUDA(cerr); 5409ae82921SPaul Mullowney 5419ae82921SPaul Mullowney /* Fill the upper triangular matrix */ 5429ae82921SPaul Mullowney AiUp[0]=(PetscInt) 0; 5439ae82921SPaul Mullowney AiUp[n]=nzUpper; 5449ae82921SPaul Mullowney offset = nzUpper; 5459ae82921SPaul Mullowney for (i=n-1; i>=0; i--) { 5469ae82921SPaul Mullowney v = aa + adiag[i+1] + 1; 5479ae82921SPaul Mullowney vi = aj + adiag[i+1] + 1; 5489ae82921SPaul Mullowney 549e057df02SPaul Mullowney /* number of elements NOT on the diagonal */ 5509ae82921SPaul Mullowney nz = adiag[i] - adiag[i+1]-1; 5519ae82921SPaul Mullowney 552e057df02SPaul Mullowney /* decrement the offset */ 5539ae82921SPaul Mullowney offset -= (nz+1); 5549ae82921SPaul Mullowney 555e057df02SPaul Mullowney /* first, set the diagonal elements */ 5569ae82921SPaul Mullowney AjUp[offset] = (PetscInt) i; 55709f51544SAlejandro Lamas Daviña AAUp[offset] = (MatScalar)1./v[nz]; 5589ae82921SPaul Mullowney AiUp[i] = AiUp[i+1] - (nz+1); 5599ae82921SPaul Mullowney 560580bdb30SBarry Smith ierr = PetscArraycpy(&(AjUp[offset+1]), vi, nz);CHKERRQ(ierr); 561580bdb30SBarry Smith ierr = PetscArraycpy(&(AAUp[offset+1]), v, nz);CHKERRQ(ierr); 5629ae82921SPaul Mullowney } 5632205254eSKarl Rupp 564aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 565da79fbbcSStefano Zampini ierr = PetscNew(&upTriFactor);CHKERRQ(ierr); 566da79fbbcSStefano Zampini upTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 5672205254eSKarl Rupp 568aa372e3fSPaul Mullowney /* Create the matrix description */ 56957d48284SJunchao Zhang stat = cusparseCreateMatDescr(&upTriFactor->descr);CHKERRCUSPARSE(stat); 57057d48284SJunchao Zhang stat = cusparseSetMatIndexBase(upTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 5711b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 572afb2bd1cSJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 573afb2bd1cSJunchao Zhang #else 57457d48284SJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 575afb2bd1cSJunchao Zhang #endif 57657d48284SJunchao Zhang stat = cusparseSetMatFillMode(upTriFactor->descr, CUSPARSE_FILL_MODE_UPPER);CHKERRCUSPARSE(stat); 57757d48284SJunchao Zhang stat = cusparseSetMatDiagType(upTriFactor->descr, CUSPARSE_DIAG_TYPE_NON_UNIT);CHKERRCUSPARSE(stat); 578aa372e3fSPaul Mullowney 579aa372e3fSPaul Mullowney /* set the operation */ 580aa372e3fSPaul Mullowney upTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 581aa372e3fSPaul Mullowney 582aa372e3fSPaul Mullowney /* set the matrix */ 583aa372e3fSPaul Mullowney upTriFactor->csrMat = new CsrMatrix; 584aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows = n; 585aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols = n; 586aa372e3fSPaul Mullowney upTriFactor->csrMat->num_entries = nzUpper; 587aa372e3fSPaul Mullowney 588aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(n+1); 589aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->assign(AiUp, AiUp+n+1); 590aa372e3fSPaul Mullowney 591aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(nzUpper); 592aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->assign(AjUp, AjUp+nzUpper); 593aa372e3fSPaul Mullowney 594aa372e3fSPaul Mullowney upTriFactor->csrMat->values = new THRUSTARRAY(nzUpper); 595aa372e3fSPaul Mullowney upTriFactor->csrMat->values->assign(AAUp, AAUp+nzUpper); 596aa372e3fSPaul Mullowney 597afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 598da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 599afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&upTriFactor->solveInfo);CHKERRCUSPARSE(stat); 6001b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 601afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, upTriFactor->solveOp, 602afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 603afb2bd1cSJunchao Zhang upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 604afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo, 605afb2bd1cSJunchao Zhang &upTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 606afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactor->solveBuffer,upTriFactor->solveBufferSize);CHKERRCUDA(cerr); 607afb2bd1cSJunchao Zhang #endif 608afb2bd1cSJunchao Zhang 609aa372e3fSPaul Mullowney /* perform the solve analysis */ 610aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, upTriFactor->solveOp, 611aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 612aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 613*d49cd2b7SBarry Smith upTriFactor->csrMat->column_indices->data().get(), 6141b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 615*d49cd2b7SBarry Smith upTriFactor->solveInfo, 616*d49cd2b7SBarry Smith upTriFactor->solvePolicy, upTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 617*d49cd2b7SBarry Smith #else 618*d49cd2b7SBarry Smith upTriFactor->solveInfo);CHKERRCUSPARSE(stat); 619afb2bd1cSJunchao Zhang #endif 620da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 621da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 622aa372e3fSPaul Mullowney 623da79fbbcSStefano Zampini /* assign the pointer */ 624aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->upTriFactorPtr = upTriFactor; 6252cbc15d9SMark upTriFactor->AA_h = AAUp; 62657d48284SJunchao Zhang cerr = cudaFreeHost(AiUp);CHKERRCUDA(cerr); 62757d48284SJunchao Zhang cerr = cudaFreeHost(AjUp);CHKERRCUDA(cerr); 6284863603aSSatish Balay ierr = PetscLogCpuToGpu((n+1+nzUpper)*sizeof(int)+nzUpper*sizeof(PetscScalar));CHKERRQ(ierr); 629da79fbbcSStefano Zampini } else { 6302cbc15d9SMark if (!upTriFactor->AA_h) { 6312cbc15d9SMark cerr = cudaMallocHost((void**) &upTriFactor->AA_h, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 6322cbc15d9SMark } 633da79fbbcSStefano Zampini /* Fill the upper triangular matrix */ 634da79fbbcSStefano Zampini offset = nzUpper; 635da79fbbcSStefano Zampini for (i=n-1; i>=0; i--) { 636da79fbbcSStefano Zampini v = aa + adiag[i+1] + 1; 637da79fbbcSStefano Zampini 638da79fbbcSStefano Zampini /* number of elements NOT on the diagonal */ 639da79fbbcSStefano Zampini nz = adiag[i] - adiag[i+1]-1; 640da79fbbcSStefano Zampini 641da79fbbcSStefano Zampini /* decrement the offset */ 642da79fbbcSStefano Zampini offset -= (nz+1); 643da79fbbcSStefano Zampini 644da79fbbcSStefano Zampini /* first, set the diagonal elements */ 6452cbc15d9SMark upTriFactor->AA_h[offset] = 1./v[nz]; 6462cbc15d9SMark ierr = PetscArraycpy(&(upTriFactor->AA_h[offset+1]), v, nz);CHKERRQ(ierr); 647da79fbbcSStefano Zampini } 6482cbc15d9SMark upTriFactor->csrMat->values->assign(upTriFactor->AA_h, upTriFactor->AA_h+nzUpper); 649da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(nzUpper*sizeof(PetscScalar));CHKERRQ(ierr); 650da79fbbcSStefano Zampini } 6519ae82921SPaul Mullowney } catch(char *ex) { 6529ae82921SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 6539ae82921SPaul Mullowney } 6549ae82921SPaul Mullowney } 6559ae82921SPaul Mullowney PetscFunctionReturn(0); 6569ae82921SPaul Mullowney } 6579ae82921SPaul Mullowney 658087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(Mat A) 6599ae82921SPaul Mullowney { 6609ae82921SPaul Mullowney PetscErrorCode ierr; 6619ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 6629ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 6639ae82921SPaul Mullowney IS isrow = a->row,iscol = a->icol; 6649ae82921SPaul Mullowney PetscBool row_identity,col_identity; 6659ae82921SPaul Mullowney PetscInt n = A->rmap->n; 6669ae82921SPaul Mullowney 6679ae82921SPaul Mullowney PetscFunctionBegin; 668da79fbbcSStefano Zampini if (!cusparseTriFactors) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 669087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEBuildILULowerTriMatrix(A);CHKERRQ(ierr); 670087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEBuildILUUpperTriMatrix(A);CHKERRQ(ierr); 6712205254eSKarl Rupp 672da79fbbcSStefano Zampini if (!cusparseTriFactors->workVector) { cusparseTriFactors->workVector = new THRUSTARRAY(n); } 673aa372e3fSPaul Mullowney cusparseTriFactors->nnz=a->nz; 6749ae82921SPaul Mullowney 675c70f7ee4SJunchao Zhang A->offloadmask = PETSC_OFFLOAD_BOTH; 676e057df02SPaul Mullowney /* lower triangular indices */ 6779ae82921SPaul Mullowney ierr = ISIdentity(isrow,&row_identity);CHKERRQ(ierr); 678da79fbbcSStefano Zampini if (!row_identity && !cusparseTriFactors->rpermIndices) { 679da79fbbcSStefano Zampini const PetscInt *r; 680da79fbbcSStefano Zampini 681da79fbbcSStefano Zampini ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 682aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices = new THRUSTINTARRAY(n); 683aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices->assign(r, r+n); 6849ae82921SPaul Mullowney ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 685da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscInt));CHKERRQ(ierr); 686da79fbbcSStefano Zampini } 6879ae82921SPaul Mullowney 688e057df02SPaul Mullowney /* upper triangular indices */ 6899ae82921SPaul Mullowney ierr = ISIdentity(iscol,&col_identity);CHKERRQ(ierr); 690da79fbbcSStefano Zampini if (!col_identity && !cusparseTriFactors->cpermIndices) { 691da79fbbcSStefano Zampini const PetscInt *c; 692da79fbbcSStefano Zampini 693da79fbbcSStefano Zampini ierr = ISGetIndices(iscol,&c);CHKERRQ(ierr); 694aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices = new THRUSTINTARRAY(n); 695aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices->assign(c, c+n); 6969ae82921SPaul Mullowney ierr = ISRestoreIndices(iscol,&c);CHKERRQ(ierr); 697da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscInt));CHKERRQ(ierr); 698da79fbbcSStefano Zampini } 6999ae82921SPaul Mullowney PetscFunctionReturn(0); 7009ae82921SPaul Mullowney } 7019ae82921SPaul Mullowney 702087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEBuildICCTriMatrices(Mat A) 703087f3262SPaul Mullowney { 704087f3262SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 705087f3262SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 706aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 707aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 708087f3262SPaul Mullowney cusparseStatus_t stat; 709087f3262SPaul Mullowney PetscErrorCode ierr; 71057d48284SJunchao Zhang cudaError_t cerr; 711087f3262SPaul Mullowney PetscInt *AiUp, *AjUp; 712087f3262SPaul Mullowney PetscScalar *AAUp; 713087f3262SPaul Mullowney PetscScalar *AALo; 714087f3262SPaul Mullowney PetscInt nzUpper = a->nz,n = A->rmap->n,i,offset,nz,j; 715087f3262SPaul Mullowney Mat_SeqSBAIJ *b = (Mat_SeqSBAIJ*)A->data; 716087f3262SPaul Mullowney const PetscInt *ai = b->i,*aj = b->j,*vj; 717087f3262SPaul Mullowney const MatScalar *aa = b->a,*v; 718087f3262SPaul Mullowney 719087f3262SPaul Mullowney PetscFunctionBegin; 720cf00fe3bSKarl Rupp if (!n) PetscFunctionReturn(0); 721c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 722087f3262SPaul Mullowney try { 723da79fbbcSStefano Zampini cerr = cudaMallocHost((void**) &AAUp, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 724da79fbbcSStefano Zampini cerr = cudaMallocHost((void**) &AALo, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 725da79fbbcSStefano Zampini if (!upTriFactor && !loTriFactor) { 726087f3262SPaul Mullowney /* Allocate Space for the upper triangular matrix */ 72757d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AiUp, (n+1)*sizeof(PetscInt));CHKERRCUDA(cerr); 72857d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AjUp, nzUpper*sizeof(PetscInt));CHKERRCUDA(cerr); 729087f3262SPaul Mullowney 730087f3262SPaul Mullowney /* Fill the upper triangular matrix */ 731087f3262SPaul Mullowney AiUp[0]=(PetscInt) 0; 732087f3262SPaul Mullowney AiUp[n]=nzUpper; 733087f3262SPaul Mullowney offset = 0; 734087f3262SPaul Mullowney for (i=0; i<n; i++) { 735087f3262SPaul Mullowney /* set the pointers */ 736087f3262SPaul Mullowney v = aa + ai[i]; 737087f3262SPaul Mullowney vj = aj + ai[i]; 738087f3262SPaul Mullowney nz = ai[i+1] - ai[i] - 1; /* exclude diag[i] */ 739087f3262SPaul Mullowney 740087f3262SPaul Mullowney /* first, set the diagonal elements */ 741087f3262SPaul Mullowney AjUp[offset] = (PetscInt) i; 74209f51544SAlejandro Lamas Daviña AAUp[offset] = (MatScalar)1.0/v[nz]; 743087f3262SPaul Mullowney AiUp[i] = offset; 74409f51544SAlejandro Lamas Daviña AALo[offset] = (MatScalar)1.0/v[nz]; 745087f3262SPaul Mullowney 746087f3262SPaul Mullowney offset+=1; 747087f3262SPaul Mullowney if (nz>0) { 748f22e0265SBarry Smith ierr = PetscArraycpy(&(AjUp[offset]), vj, nz);CHKERRQ(ierr); 749580bdb30SBarry Smith ierr = PetscArraycpy(&(AAUp[offset]), v, nz);CHKERRQ(ierr); 750087f3262SPaul Mullowney for (j=offset; j<offset+nz; j++) { 751087f3262SPaul Mullowney AAUp[j] = -AAUp[j]; 752087f3262SPaul Mullowney AALo[j] = AAUp[j]/v[nz]; 753087f3262SPaul Mullowney } 754087f3262SPaul Mullowney offset+=nz; 755087f3262SPaul Mullowney } 756087f3262SPaul Mullowney } 757087f3262SPaul Mullowney 758aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 759da79fbbcSStefano Zampini ierr = PetscNew(&upTriFactor);CHKERRQ(ierr); 760da79fbbcSStefano Zampini upTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 761087f3262SPaul Mullowney 762aa372e3fSPaul Mullowney /* Create the matrix description */ 76357d48284SJunchao Zhang stat = cusparseCreateMatDescr(&upTriFactor->descr);CHKERRCUSPARSE(stat); 76457d48284SJunchao Zhang stat = cusparseSetMatIndexBase(upTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 7651b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 766afb2bd1cSJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 767afb2bd1cSJunchao Zhang #else 76857d48284SJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 769afb2bd1cSJunchao Zhang #endif 77057d48284SJunchao Zhang stat = cusparseSetMatFillMode(upTriFactor->descr, CUSPARSE_FILL_MODE_UPPER);CHKERRCUSPARSE(stat); 77157d48284SJunchao Zhang stat = cusparseSetMatDiagType(upTriFactor->descr, CUSPARSE_DIAG_TYPE_UNIT);CHKERRCUSPARSE(stat); 772087f3262SPaul Mullowney 773aa372e3fSPaul Mullowney /* set the matrix */ 774aa372e3fSPaul Mullowney upTriFactor->csrMat = new CsrMatrix; 775aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows = A->rmap->n; 776aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols = A->cmap->n; 777aa372e3fSPaul Mullowney upTriFactor->csrMat->num_entries = a->nz; 778aa372e3fSPaul Mullowney 779aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 780aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->assign(AiUp, AiUp+A->rmap->n+1); 781aa372e3fSPaul Mullowney 782aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(a->nz); 783aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->assign(AjUp, AjUp+a->nz); 784aa372e3fSPaul Mullowney 785aa372e3fSPaul Mullowney upTriFactor->csrMat->values = new THRUSTARRAY(a->nz); 786aa372e3fSPaul Mullowney upTriFactor->csrMat->values->assign(AAUp, AAUp+a->nz); 787aa372e3fSPaul Mullowney 788afb2bd1cSJunchao Zhang /* set the operation */ 789afb2bd1cSJunchao Zhang upTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 790afb2bd1cSJunchao Zhang 791afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 792da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 793afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&upTriFactor->solveInfo);CHKERRCUSPARSE(stat); 7941b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 795afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, upTriFactor->solveOp, 796afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 797afb2bd1cSJunchao Zhang upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 798afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo, 799afb2bd1cSJunchao Zhang &upTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 800afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactor->solveBuffer,upTriFactor->solveBufferSize);CHKERRCUDA(cerr); 801afb2bd1cSJunchao Zhang #endif 802afb2bd1cSJunchao Zhang 803aa372e3fSPaul Mullowney /* perform the solve analysis */ 804aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, upTriFactor->solveOp, 805aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 806aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 807*d49cd2b7SBarry Smith upTriFactor->csrMat->column_indices->data().get(), 8081b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 809*d49cd2b7SBarry Smith upTriFactor->solveInfo, 810*d49cd2b7SBarry Smith upTriFactor->solvePolicy, upTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 811*d49cd2b7SBarry Smith #else 812*d49cd2b7SBarry Smith upTriFactor->solveInfo);CHKERRCUSPARSE(stat); 813afb2bd1cSJunchao Zhang #endif 814da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 815da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 816aa372e3fSPaul Mullowney 817da79fbbcSStefano Zampini /* assign the pointer */ 818aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->upTriFactorPtr = upTriFactor; 819aa372e3fSPaul Mullowney 820aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 821da79fbbcSStefano Zampini ierr = PetscNew(&loTriFactor);CHKERRQ(ierr); 822da79fbbcSStefano Zampini loTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 823aa372e3fSPaul Mullowney 824aa372e3fSPaul Mullowney /* Create the matrix description */ 82557d48284SJunchao Zhang stat = cusparseCreateMatDescr(&loTriFactor->descr);CHKERRCUSPARSE(stat); 82657d48284SJunchao Zhang stat = cusparseSetMatIndexBase(loTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 8271b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 828afb2bd1cSJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 829afb2bd1cSJunchao Zhang #else 83057d48284SJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 831afb2bd1cSJunchao Zhang #endif 83257d48284SJunchao Zhang stat = cusparseSetMatFillMode(loTriFactor->descr, CUSPARSE_FILL_MODE_UPPER);CHKERRCUSPARSE(stat); 83357d48284SJunchao Zhang stat = cusparseSetMatDiagType(loTriFactor->descr, CUSPARSE_DIAG_TYPE_NON_UNIT);CHKERRCUSPARSE(stat); 834aa372e3fSPaul Mullowney 835aa372e3fSPaul Mullowney /* set the operation */ 836aa372e3fSPaul Mullowney loTriFactor->solveOp = CUSPARSE_OPERATION_TRANSPOSE; 837aa372e3fSPaul Mullowney 838aa372e3fSPaul Mullowney /* set the matrix */ 839aa372e3fSPaul Mullowney loTriFactor->csrMat = new CsrMatrix; 840aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows = A->rmap->n; 841aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols = A->cmap->n; 842aa372e3fSPaul Mullowney loTriFactor->csrMat->num_entries = a->nz; 843aa372e3fSPaul Mullowney 844aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 845aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->assign(AiUp, AiUp+A->rmap->n+1); 846aa372e3fSPaul Mullowney 847aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(a->nz); 848aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->assign(AjUp, AjUp+a->nz); 849aa372e3fSPaul Mullowney 850aa372e3fSPaul Mullowney loTriFactor->csrMat->values = new THRUSTARRAY(a->nz); 851aa372e3fSPaul Mullowney loTriFactor->csrMat->values->assign(AALo, AALo+a->nz); 852aa372e3fSPaul Mullowney 853afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 854da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 855afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&loTriFactor->solveInfo);CHKERRCUSPARSE(stat); 8561b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 857afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, loTriFactor->solveOp, 858afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 859afb2bd1cSJunchao Zhang loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 860afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo, 861afb2bd1cSJunchao Zhang &loTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 862afb2bd1cSJunchao Zhang cerr = cudaMalloc(&loTriFactor->solveBuffer,loTriFactor->solveBufferSize);CHKERRCUDA(cerr); 863afb2bd1cSJunchao Zhang #endif 864afb2bd1cSJunchao Zhang 865aa372e3fSPaul Mullowney /* perform the solve analysis */ 866aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, loTriFactor->solveOp, 867aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 868aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 869*d49cd2b7SBarry Smith loTriFactor->csrMat->column_indices->data().get(), 8701b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 871*d49cd2b7SBarry Smith loTriFactor->solveInfo, 872*d49cd2b7SBarry Smith loTriFactor->solvePolicy, loTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 873*d49cd2b7SBarry Smith #else 874*d49cd2b7SBarry Smith loTriFactor->solveInfo);CHKERRCUSPARSE(stat); 875afb2bd1cSJunchao Zhang #endif 876da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 877da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 878aa372e3fSPaul Mullowney 879da79fbbcSStefano Zampini /* assign the pointer */ 880aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->loTriFactorPtr = loTriFactor; 881087f3262SPaul Mullowney 882da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(2*(((A->rmap->n+1)+(a->nz))*sizeof(int)+(a->nz)*sizeof(PetscScalar)));CHKERRQ(ierr); 88357d48284SJunchao Zhang cerr = cudaFreeHost(AiUp);CHKERRCUDA(cerr); 88457d48284SJunchao Zhang cerr = cudaFreeHost(AjUp);CHKERRCUDA(cerr); 885da79fbbcSStefano Zampini } else { 886da79fbbcSStefano Zampini /* Fill the upper triangular matrix */ 887da79fbbcSStefano Zampini offset = 0; 888da79fbbcSStefano Zampini for (i=0; i<n; i++) { 889da79fbbcSStefano Zampini /* set the pointers */ 890da79fbbcSStefano Zampini v = aa + ai[i]; 891da79fbbcSStefano Zampini nz = ai[i+1] - ai[i] - 1; /* exclude diag[i] */ 892da79fbbcSStefano Zampini 893da79fbbcSStefano Zampini /* first, set the diagonal elements */ 894da79fbbcSStefano Zampini AAUp[offset] = 1.0/v[nz]; 895da79fbbcSStefano Zampini AALo[offset] = 1.0/v[nz]; 896da79fbbcSStefano Zampini 897da79fbbcSStefano Zampini offset+=1; 898da79fbbcSStefano Zampini if (nz>0) { 899da79fbbcSStefano Zampini ierr = PetscArraycpy(&(AAUp[offset]), v, nz);CHKERRQ(ierr); 900da79fbbcSStefano Zampini for (j=offset; j<offset+nz; j++) { 901da79fbbcSStefano Zampini AAUp[j] = -AAUp[j]; 902da79fbbcSStefano Zampini AALo[j] = AAUp[j]/v[nz]; 903da79fbbcSStefano Zampini } 904da79fbbcSStefano Zampini offset+=nz; 905da79fbbcSStefano Zampini } 906da79fbbcSStefano Zampini } 907da79fbbcSStefano Zampini if (!upTriFactor) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 908da79fbbcSStefano Zampini if (!loTriFactor) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 909da79fbbcSStefano Zampini upTriFactor->csrMat->values->assign(AAUp, AAUp+a->nz); 910da79fbbcSStefano Zampini loTriFactor->csrMat->values->assign(AALo, AALo+a->nz); 911da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(2*(a->nz)*sizeof(PetscScalar));CHKERRQ(ierr); 912da79fbbcSStefano Zampini } 91357d48284SJunchao Zhang cerr = cudaFreeHost(AAUp);CHKERRCUDA(cerr); 91457d48284SJunchao Zhang cerr = cudaFreeHost(AALo);CHKERRCUDA(cerr); 915087f3262SPaul Mullowney } catch(char *ex) { 916087f3262SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 917087f3262SPaul Mullowney } 918087f3262SPaul Mullowney } 919087f3262SPaul Mullowney PetscFunctionReturn(0); 920087f3262SPaul Mullowney } 921087f3262SPaul Mullowney 922087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEICCAnalysisAndCopyToGPU(Mat A) 9239ae82921SPaul Mullowney { 9249ae82921SPaul Mullowney PetscErrorCode ierr; 925087f3262SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 926087f3262SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 927087f3262SPaul Mullowney IS ip = a->row; 928087f3262SPaul Mullowney PetscBool perm_identity; 929087f3262SPaul Mullowney PetscInt n = A->rmap->n; 930087f3262SPaul Mullowney 931087f3262SPaul Mullowney PetscFunctionBegin; 932da79fbbcSStefano Zampini if (!cusparseTriFactors) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 933087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEBuildICCTriMatrices(A);CHKERRQ(ierr); 934da79fbbcSStefano Zampini if (!cusparseTriFactors->workVector) { cusparseTriFactors->workVector = new THRUSTARRAY(n); } 935aa372e3fSPaul Mullowney cusparseTriFactors->nnz=(a->nz-n)*2 + n; 936aa372e3fSPaul Mullowney 937da79fbbcSStefano Zampini A->offloadmask = PETSC_OFFLOAD_BOTH; 938da79fbbcSStefano Zampini 939087f3262SPaul Mullowney /* lower triangular indices */ 940087f3262SPaul Mullowney ierr = ISIdentity(ip,&perm_identity);CHKERRQ(ierr); 941087f3262SPaul Mullowney if (!perm_identity) { 9424e4bbfaaSStefano Zampini IS iip; 943da79fbbcSStefano Zampini const PetscInt *irip,*rip; 9444e4bbfaaSStefano Zampini 9454e4bbfaaSStefano Zampini ierr = ISInvertPermutation(ip,PETSC_DECIDE,&iip);CHKERRQ(ierr); 9464e4bbfaaSStefano Zampini ierr = ISGetIndices(iip,&irip);CHKERRQ(ierr); 947da79fbbcSStefano Zampini ierr = ISGetIndices(ip,&rip);CHKERRQ(ierr); 948aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices = new THRUSTINTARRAY(n); 949aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices->assign(rip, rip+n); 950aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices = new THRUSTINTARRAY(n); 9514e4bbfaaSStefano Zampini cusparseTriFactors->cpermIndices->assign(irip, irip+n); 9524e4bbfaaSStefano Zampini ierr = ISRestoreIndices(iip,&irip);CHKERRQ(ierr); 9534e4bbfaaSStefano Zampini ierr = ISDestroy(&iip);CHKERRQ(ierr); 954087f3262SPaul Mullowney ierr = ISRestoreIndices(ip,&rip);CHKERRQ(ierr); 955da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(2.*n*sizeof(PetscInt));CHKERRQ(ierr); 956da79fbbcSStefano Zampini } 957087f3262SPaul Mullowney PetscFunctionReturn(0); 958087f3262SPaul Mullowney } 959087f3262SPaul Mullowney 960087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorNumeric_SeqAIJCUSPARSE(Mat B,Mat A,const MatFactorInfo *info) 961087f3262SPaul Mullowney { 962087f3262SPaul Mullowney Mat_SeqAIJ *b = (Mat_SeqAIJ*)B->data; 963087f3262SPaul Mullowney IS ip = b->row; 964087f3262SPaul Mullowney PetscBool perm_identity; 965b175d8bbSPaul Mullowney PetscErrorCode ierr; 966087f3262SPaul Mullowney 967087f3262SPaul Mullowney PetscFunctionBegin; 96857181aedSStefano Zampini ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 969087f3262SPaul Mullowney ierr = MatCholeskyFactorNumeric_SeqAIJ(B,A,info);CHKERRQ(ierr); 970ccdfe979SStefano Zampini B->offloadmask = PETSC_OFFLOAD_CPU; 971087f3262SPaul Mullowney /* determine which version of MatSolve needs to be used. */ 972087f3262SPaul Mullowney ierr = ISIdentity(ip,&perm_identity);CHKERRQ(ierr); 973087f3262SPaul Mullowney if (perm_identity) { 974087f3262SPaul Mullowney B->ops->solve = MatSolve_SeqAIJCUSPARSE_NaturalOrdering; 975087f3262SPaul Mullowney B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering; 9764e4bbfaaSStefano Zampini B->ops->matsolve = NULL; 9774e4bbfaaSStefano Zampini B->ops->matsolvetranspose = NULL; 978087f3262SPaul Mullowney } else { 979087f3262SPaul Mullowney B->ops->solve = MatSolve_SeqAIJCUSPARSE; 980087f3262SPaul Mullowney B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE; 9814e4bbfaaSStefano Zampini B->ops->matsolve = NULL; 9824e4bbfaaSStefano Zampini B->ops->matsolvetranspose = NULL; 983087f3262SPaul Mullowney } 984087f3262SPaul Mullowney 985087f3262SPaul Mullowney /* get the triangular factors */ 986087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEICCAnalysisAndCopyToGPU(B);CHKERRQ(ierr); 987087f3262SPaul Mullowney PetscFunctionReturn(0); 988087f3262SPaul Mullowney } 9899ae82921SPaul Mullowney 990b175d8bbSPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(Mat A) 991bda325fcSPaul Mullowney { 992bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 993aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 994aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 995da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT; 996da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT; 997bda325fcSPaul Mullowney cusparseStatus_t stat; 998aa372e3fSPaul Mullowney cusparseIndexBase_t indexBase; 999aa372e3fSPaul Mullowney cusparseMatrixType_t matrixType; 1000aa372e3fSPaul Mullowney cusparseFillMode_t fillMode; 1001aa372e3fSPaul Mullowney cusparseDiagType_t diagType; 10021b0a6780SStefano Zampini cudaError_t cerr; 1003da79fbbcSStefano Zampini PetscErrorCode ierr; 1004b175d8bbSPaul Mullowney 1005bda325fcSPaul Mullowney PetscFunctionBegin; 1006aa372e3fSPaul Mullowney /* allocate space for the transpose of the lower triangular factor */ 1007da79fbbcSStefano Zampini ierr = PetscNew(&loTriFactorT);CHKERRQ(ierr); 1008da79fbbcSStefano Zampini loTriFactorT->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 1009aa372e3fSPaul Mullowney 1010aa372e3fSPaul Mullowney /* set the matrix descriptors of the lower triangular factor */ 1011aa372e3fSPaul Mullowney matrixType = cusparseGetMatType(loTriFactor->descr); 1012aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(loTriFactor->descr); 1013aa372e3fSPaul Mullowney fillMode = cusparseGetMatFillMode(loTriFactor->descr)==CUSPARSE_FILL_MODE_UPPER ? 1014aa372e3fSPaul Mullowney CUSPARSE_FILL_MODE_LOWER : CUSPARSE_FILL_MODE_UPPER; 1015aa372e3fSPaul Mullowney diagType = cusparseGetMatDiagType(loTriFactor->descr); 1016aa372e3fSPaul Mullowney 1017aa372e3fSPaul Mullowney /* Create the matrix description */ 101857d48284SJunchao Zhang stat = cusparseCreateMatDescr(&loTriFactorT->descr);CHKERRCUSPARSE(stat); 101957d48284SJunchao Zhang stat = cusparseSetMatIndexBase(loTriFactorT->descr, indexBase);CHKERRCUSPARSE(stat); 102057d48284SJunchao Zhang stat = cusparseSetMatType(loTriFactorT->descr, matrixType);CHKERRCUSPARSE(stat); 102157d48284SJunchao Zhang stat = cusparseSetMatFillMode(loTriFactorT->descr, fillMode);CHKERRCUSPARSE(stat); 102257d48284SJunchao Zhang stat = cusparseSetMatDiagType(loTriFactorT->descr, diagType);CHKERRCUSPARSE(stat); 1023aa372e3fSPaul Mullowney 1024aa372e3fSPaul Mullowney /* set the operation */ 1025aa372e3fSPaul Mullowney loTriFactorT->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 1026aa372e3fSPaul Mullowney 1027aa372e3fSPaul Mullowney /* allocate GPU space for the CSC of the lower triangular factor*/ 1028aa372e3fSPaul Mullowney loTriFactorT->csrMat = new CsrMatrix; 1029afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows = loTriFactor->csrMat->num_cols; 1030afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_cols = loTriFactor->csrMat->num_rows; 1031aa372e3fSPaul Mullowney loTriFactorT->csrMat->num_entries = loTriFactor->csrMat->num_entries; 1032afb2bd1cSJunchao Zhang loTriFactorT->csrMat->row_offsets = new THRUSTINTARRAY32(loTriFactorT->csrMat->num_rows+1); 1033afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices = new THRUSTINTARRAY32(loTriFactorT->csrMat->num_entries); 1034afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values = new THRUSTARRAY(loTriFactorT->csrMat->num_entries); 1035aa372e3fSPaul Mullowney 1036aa372e3fSPaul Mullowney /* compute the transpose of the lower triangular factor, i.e. the CSC */ 1037afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1038afb2bd1cSJunchao Zhang stat = cusparseCsr2cscEx2_bufferSize(cusparseTriFactors->handle, loTriFactor->csrMat->num_rows, 1039afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_cols, loTriFactor->csrMat->num_entries, 1040afb2bd1cSJunchao Zhang loTriFactor->csrMat->values->data().get(), 1041afb2bd1cSJunchao Zhang loTriFactor->csrMat->row_offsets->data().get(), 1042afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), 1043afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values->data().get(), 1044afb2bd1cSJunchao Zhang loTriFactorT->csrMat->row_offsets->data().get(), loTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1045afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC,indexBase, 1046afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG1, &loTriFactor->csr2cscBufferSize);CHKERRCUSPARSE(stat); 10471b0a6780SStefano Zampini cerr = cudaMalloc(&loTriFactor->csr2cscBuffer,loTriFactor->csr2cscBufferSize);CHKERRCUDA(cerr); 1048afb2bd1cSJunchao Zhang #endif 1049afb2bd1cSJunchao Zhang 1050da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1051aa372e3fSPaul Mullowney stat = cusparse_csr2csc(cusparseTriFactors->handle, loTriFactor->csrMat->num_rows, 1052aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols, loTriFactor->csrMat->num_entries, 1053aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), 1054aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->data().get(), 1055aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->data().get(), 1056aa372e3fSPaul Mullowney loTriFactorT->csrMat->values->data().get(), 1057afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1058afb2bd1cSJunchao Zhang loTriFactorT->csrMat->row_offsets->data().get(), loTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1059afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase, 1060*d49cd2b7SBarry Smith CUSPARSE_CSR2CSC_ALG1, loTriFactor->csr2cscBuffer);CHKERRCUSPARSE(stat); 1061afb2bd1cSJunchao Zhang #else 1062afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), 1063*d49cd2b7SBarry Smith CUSPARSE_ACTION_NUMERIC, indexBase);CHKERRCUSPARSE(stat); 1064afb2bd1cSJunchao Zhang #endif 1065da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1066da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1067aa372e3fSPaul Mullowney 1068afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 1069da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1070afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&loTriFactorT->solveInfo);CHKERRCUSPARSE(stat); 10711b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1072afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, loTriFactorT->solveOp, 1073afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, loTriFactorT->csrMat->num_entries, loTriFactorT->descr, 1074afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), 1075afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices->data().get(), loTriFactorT->solveInfo, 1076afb2bd1cSJunchao Zhang &loTriFactorT->solveBufferSize);CHKERRCUSPARSE(stat); 1077afb2bd1cSJunchao Zhang cerr = cudaMalloc(&loTriFactorT->solveBuffer,loTriFactorT->solveBufferSize);CHKERRCUDA(cerr); 1078afb2bd1cSJunchao Zhang #endif 1079afb2bd1cSJunchao Zhang 1080afb2bd1cSJunchao Zhang /* perform the solve analysis */ 1081aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, loTriFactorT->solveOp, 1082afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, loTriFactorT->csrMat->num_entries, loTriFactorT->descr, 1083afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), 1084*d49cd2b7SBarry Smith loTriFactorT->csrMat->column_indices->data().get(), 10851b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1086*d49cd2b7SBarry Smith loTriFactorT->solveInfo, 1087*d49cd2b7SBarry Smith loTriFactorT->solvePolicy, loTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1088*d49cd2b7SBarry Smith #else 1089*d49cd2b7SBarry Smith loTriFactorT->solveInfo);CHKERRCUSPARSE(stat); 1090afb2bd1cSJunchao Zhang #endif 1091da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1092da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1093aa372e3fSPaul Mullowney 1094da79fbbcSStefano Zampini /* assign the pointer */ 1095aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->loTriFactorPtrTranspose = loTriFactorT; 1096aa372e3fSPaul Mullowney 1097aa372e3fSPaul Mullowney /*********************************************/ 1098aa372e3fSPaul Mullowney /* Now the Transpose of the Upper Tri Factor */ 1099aa372e3fSPaul Mullowney /*********************************************/ 1100aa372e3fSPaul Mullowney 1101aa372e3fSPaul Mullowney /* allocate space for the transpose of the upper triangular factor */ 1102da79fbbcSStefano Zampini ierr = PetscNew(&upTriFactorT);CHKERRQ(ierr); 1103da79fbbcSStefano Zampini upTriFactorT->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 1104aa372e3fSPaul Mullowney 1105aa372e3fSPaul Mullowney /* set the matrix descriptors of the upper triangular factor */ 1106aa372e3fSPaul Mullowney matrixType = cusparseGetMatType(upTriFactor->descr); 1107aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(upTriFactor->descr); 1108aa372e3fSPaul Mullowney fillMode = cusparseGetMatFillMode(upTriFactor->descr)==CUSPARSE_FILL_MODE_UPPER ? 1109aa372e3fSPaul Mullowney CUSPARSE_FILL_MODE_LOWER : CUSPARSE_FILL_MODE_UPPER; 1110aa372e3fSPaul Mullowney diagType = cusparseGetMatDiagType(upTriFactor->descr); 1111aa372e3fSPaul Mullowney 1112aa372e3fSPaul Mullowney /* Create the matrix description */ 111357d48284SJunchao Zhang stat = cusparseCreateMatDescr(&upTriFactorT->descr);CHKERRCUSPARSE(stat); 111457d48284SJunchao Zhang stat = cusparseSetMatIndexBase(upTriFactorT->descr, indexBase);CHKERRCUSPARSE(stat); 111557d48284SJunchao Zhang stat = cusparseSetMatType(upTriFactorT->descr, matrixType);CHKERRCUSPARSE(stat); 111657d48284SJunchao Zhang stat = cusparseSetMatFillMode(upTriFactorT->descr, fillMode);CHKERRCUSPARSE(stat); 111757d48284SJunchao Zhang stat = cusparseSetMatDiagType(upTriFactorT->descr, diagType);CHKERRCUSPARSE(stat); 1118aa372e3fSPaul Mullowney 1119aa372e3fSPaul Mullowney /* set the operation */ 1120aa372e3fSPaul Mullowney upTriFactorT->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 1121aa372e3fSPaul Mullowney 1122aa372e3fSPaul Mullowney /* allocate GPU space for the CSC of the upper triangular factor*/ 1123aa372e3fSPaul Mullowney upTriFactorT->csrMat = new CsrMatrix; 1124afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows = upTriFactor->csrMat->num_cols; 1125afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_cols = upTriFactor->csrMat->num_rows; 1126aa372e3fSPaul Mullowney upTriFactorT->csrMat->num_entries = upTriFactor->csrMat->num_entries; 1127afb2bd1cSJunchao Zhang upTriFactorT->csrMat->row_offsets = new THRUSTINTARRAY32(upTriFactorT->csrMat->num_rows+1); 1128afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices = new THRUSTINTARRAY32(upTriFactorT->csrMat->num_entries); 1129afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values = new THRUSTARRAY(upTriFactorT->csrMat->num_entries); 1130aa372e3fSPaul Mullowney 1131aa372e3fSPaul Mullowney /* compute the transpose of the upper triangular factor, i.e. the CSC */ 1132afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1133afb2bd1cSJunchao Zhang stat = cusparseCsr2cscEx2_bufferSize(cusparseTriFactors->handle,upTriFactor->csrMat->num_rows, 1134afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_cols, upTriFactor->csrMat->num_entries, 1135afb2bd1cSJunchao Zhang upTriFactor->csrMat->values->data().get(), 1136afb2bd1cSJunchao Zhang upTriFactor->csrMat->row_offsets->data().get(), 1137afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), 1138afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values->data().get(), 1139afb2bd1cSJunchao Zhang upTriFactorT->csrMat->row_offsets->data().get(), upTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1140afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC,indexBase, 1141afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG1, &upTriFactor->csr2cscBufferSize);CHKERRCUSPARSE(stat); 1142afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactor->csr2cscBuffer,upTriFactor->csr2cscBufferSize);CHKERRCUDA(cerr); 1143afb2bd1cSJunchao Zhang #endif 1144afb2bd1cSJunchao Zhang 1145da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1146aa372e3fSPaul Mullowney stat = cusparse_csr2csc(cusparseTriFactors->handle, upTriFactor->csrMat->num_rows, 1147aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols, upTriFactor->csrMat->num_entries, 1148aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), 1149aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->data().get(), 1150aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->data().get(), 1151aa372e3fSPaul Mullowney upTriFactorT->csrMat->values->data().get(), 1152afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1153afb2bd1cSJunchao Zhang upTriFactorT->csrMat->row_offsets->data().get(), upTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1154afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase, 1155*d49cd2b7SBarry Smith CUSPARSE_CSR2CSC_ALG1, upTriFactor->csr2cscBuffer);CHKERRCUSPARSE(stat); 1156afb2bd1cSJunchao Zhang #else 1157afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), 1158*d49cd2b7SBarry Smith CUSPARSE_ACTION_NUMERIC, indexBase);CHKERRCUSPARSE(stat); 1159afb2bd1cSJunchao Zhang #endif 1160*d49cd2b7SBarry Smith 1161da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1162da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1163aa372e3fSPaul Mullowney 1164afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 1165da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1166afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&upTriFactorT->solveInfo);CHKERRCUSPARSE(stat); 11671b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1168afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, upTriFactorT->solveOp, 1169afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, upTriFactorT->csrMat->num_entries, upTriFactorT->descr, 1170afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), 1171afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices->data().get(), upTriFactorT->solveInfo, 1172afb2bd1cSJunchao Zhang &upTriFactorT->solveBufferSize);CHKERRCUSPARSE(stat); 1173afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactorT->solveBuffer,upTriFactorT->solveBufferSize);CHKERRCUDA(cerr); 1174afb2bd1cSJunchao Zhang #endif 1175afb2bd1cSJunchao Zhang 1176afb2bd1cSJunchao Zhang /* perform the solve analysis */ 1177aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, upTriFactorT->solveOp, 1178afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, upTriFactorT->csrMat->num_entries, upTriFactorT->descr, 1179afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), 1180*d49cd2b7SBarry Smith upTriFactorT->csrMat->column_indices->data().get(), 11811b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1182*d49cd2b7SBarry Smith upTriFactorT->solveInfo, 1183*d49cd2b7SBarry Smith upTriFactorT->solvePolicy, upTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1184*d49cd2b7SBarry Smith #else 1185*d49cd2b7SBarry Smith upTriFactorT->solveInfo);CHKERRCUSPARSE(stat); 1186afb2bd1cSJunchao Zhang #endif 1187*d49cd2b7SBarry Smith 1188da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1189da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1190aa372e3fSPaul Mullowney 1191da79fbbcSStefano Zampini /* assign the pointer */ 1192aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->upTriFactorPtrTranspose = upTriFactorT; 1193bda325fcSPaul Mullowney PetscFunctionReturn(0); 1194bda325fcSPaul Mullowney } 1195bda325fcSPaul Mullowney 1196a49f1ed0SStefano Zampini struct PetscScalarToPetscInt 1197a49f1ed0SStefano Zampini { 1198a49f1ed0SStefano Zampini __host__ __device__ 1199a49f1ed0SStefano Zampini PetscInt operator()(PetscScalar s) 1200a49f1ed0SStefano Zampini { 1201a49f1ed0SStefano Zampini return (PetscInt)PetscRealPart(s); 1202a49f1ed0SStefano Zampini } 1203a49f1ed0SStefano Zampini }; 1204a49f1ed0SStefano Zampini 12051a2c6b5cSJunchao Zhang static PetscErrorCode MatSeqAIJCUSPARSEFormExplicitTransposeForMult(Mat A) 1206bda325fcSPaul Mullowney { 1207aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 1208a49f1ed0SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *matstruct, *matstructT; 1209bda325fcSPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 1210bda325fcSPaul Mullowney cusparseStatus_t stat; 1211aa372e3fSPaul Mullowney cusparseIndexBase_t indexBase; 1212b06137fdSPaul Mullowney cudaError_t err; 121385ba7357SStefano Zampini PetscErrorCode ierr; 1214b175d8bbSPaul Mullowney 1215bda325fcSPaul Mullowney PetscFunctionBegin; 12161a2c6b5cSJunchao Zhang if (!A->form_explicit_transpose || !A->rmap->n || !A->cmap->n) PetscFunctionReturn(0); 1217a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 1218a49f1ed0SStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->mat; 1219e8d2b73aSMark Adams if (!matstruct) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing mat struct"); 1220a49f1ed0SStefano Zampini matstructT = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->matTranspose; 1221e8d2b73aSMark Adams if (A->transupdated && !matstructT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing matTranspose struct"); 12221a2c6b5cSJunchao Zhang if (A->transupdated) PetscFunctionReturn(0); 122385ba7357SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1224ee7b52eaSHong Zhang ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1225a49f1ed0SStefano Zampini if (cusparsestruct->format != MAT_CUSPARSE_CSR) { 1226a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr); 1227a49f1ed0SStefano Zampini } 1228a49f1ed0SStefano Zampini if (!cusparsestruct->matTranspose) { /* create cusparse matrix */ 1229aa372e3fSPaul Mullowney matstructT = new Mat_SeqAIJCUSPARSEMultStruct; 123057d48284SJunchao Zhang stat = cusparseCreateMatDescr(&matstructT->descr);CHKERRCUSPARSE(stat); 1231aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(matstruct->descr); 123257d48284SJunchao Zhang stat = cusparseSetMatIndexBase(matstructT->descr, indexBase);CHKERRCUSPARSE(stat); 123357d48284SJunchao Zhang stat = cusparseSetMatType(matstructT->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 1234aa372e3fSPaul Mullowney 1235b06137fdSPaul Mullowney /* set alpha and beta */ 1236afb2bd1cSJunchao Zhang err = cudaMalloc((void **)&(matstructT->alpha_one),sizeof(PetscScalar));CHKERRCUDA(err); 12377656d835SStefano Zampini err = cudaMalloc((void **)&(matstructT->beta_zero),sizeof(PetscScalar));CHKERRCUDA(err); 12387656d835SStefano Zampini err = cudaMalloc((void **)&(matstructT->beta_one), sizeof(PetscScalar));CHKERRCUDA(err); 1239afb2bd1cSJunchao Zhang err = cudaMemcpy(matstructT->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 12407656d835SStefano Zampini err = cudaMemcpy(matstructT->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 12417656d835SStefano Zampini err = cudaMemcpy(matstructT->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 1242b06137fdSPaul Mullowney 1243aa372e3fSPaul Mullowney if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 1244aa372e3fSPaul Mullowney CsrMatrix *matrixT = new CsrMatrix; 1245a49f1ed0SStefano Zampini matstructT->mat = matrixT; 1246554b8892SKarl Rupp matrixT->num_rows = A->cmap->n; 1247554b8892SKarl Rupp matrixT->num_cols = A->rmap->n; 1248aa372e3fSPaul Mullowney matrixT->num_entries = a->nz; 1249a8bd5306SMark Adams matrixT->row_offsets = new THRUSTINTARRAY32(matrixT->num_rows+1); 1250aa372e3fSPaul Mullowney matrixT->column_indices = new THRUSTINTARRAY32(a->nz); 1251aa372e3fSPaul Mullowney matrixT->values = new THRUSTARRAY(a->nz); 1252a3fdcf43SKarl Rupp 1253039c6fbaSStefano Zampini if (!cusparsestruct->rowoffsets_gpu) { cusparsestruct->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n+1); } 125481902715SJunchao Zhang cusparsestruct->rowoffsets_gpu->assign(a->i,a->i+A->rmap->n+1); 1255afb2bd1cSJunchao Zhang 1256afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1257afb2bd1cSJunchao Zhang stat = cusparseCreateCsr(&matstructT->matDescr, 1258afb2bd1cSJunchao Zhang matrixT->num_rows, matrixT->num_cols, matrixT->num_entries, 1259afb2bd1cSJunchao Zhang matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), 1260afb2bd1cSJunchao Zhang matrixT->values->data().get(), 1261afb2bd1cSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, /* row offset, col idx type due to THRUSTINTARRAY32 */ 1262afb2bd1cSJunchao Zhang indexBase,cusparse_scalartype);CHKERRCUSPARSE(stat); 1263afb2bd1cSJunchao Zhang #endif 1264aa372e3fSPaul Mullowney } else if (cusparsestruct->format == MAT_CUSPARSE_ELL || cusparsestruct->format == MAT_CUSPARSE_HYB) { 1265afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1266afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 1267afb2bd1cSJunchao Zhang #else 1268aa372e3fSPaul Mullowney CsrMatrix *temp = new CsrMatrix; 126951c6d536SStefano Zampini CsrMatrix *tempT = new CsrMatrix; 127051c6d536SStefano Zampini /* First convert HYB to CSR */ 1271aa372e3fSPaul Mullowney temp->num_rows = A->rmap->n; 1272aa372e3fSPaul Mullowney temp->num_cols = A->cmap->n; 1273aa372e3fSPaul Mullowney temp->num_entries = a->nz; 1274aa372e3fSPaul Mullowney temp->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 1275aa372e3fSPaul Mullowney temp->column_indices = new THRUSTINTARRAY32(a->nz); 1276aa372e3fSPaul Mullowney temp->values = new THRUSTARRAY(a->nz); 1277aa372e3fSPaul Mullowney 1278aa372e3fSPaul Mullowney stat = cusparse_hyb2csr(cusparsestruct->handle, 1279aa372e3fSPaul Mullowney matstruct->descr, (cusparseHybMat_t)matstruct->mat, 1280aa372e3fSPaul Mullowney temp->values->data().get(), 1281aa372e3fSPaul Mullowney temp->row_offsets->data().get(), 128257d48284SJunchao Zhang temp->column_indices->data().get());CHKERRCUSPARSE(stat); 1283aa372e3fSPaul Mullowney 1284aa372e3fSPaul Mullowney /* Next, convert CSR to CSC (i.e. the matrix transpose) */ 1285aa372e3fSPaul Mullowney tempT->num_rows = A->rmap->n; 1286aa372e3fSPaul Mullowney tempT->num_cols = A->cmap->n; 1287aa372e3fSPaul Mullowney tempT->num_entries = a->nz; 1288aa372e3fSPaul Mullowney tempT->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 1289aa372e3fSPaul Mullowney tempT->column_indices = new THRUSTINTARRAY32(a->nz); 1290aa372e3fSPaul Mullowney tempT->values = new THRUSTARRAY(a->nz); 1291aa372e3fSPaul Mullowney 1292aa372e3fSPaul Mullowney stat = cusparse_csr2csc(cusparsestruct->handle, temp->num_rows, 1293aa372e3fSPaul Mullowney temp->num_cols, temp->num_entries, 1294aa372e3fSPaul Mullowney temp->values->data().get(), 1295aa372e3fSPaul Mullowney temp->row_offsets->data().get(), 1296aa372e3fSPaul Mullowney temp->column_indices->data().get(), 1297aa372e3fSPaul Mullowney tempT->values->data().get(), 1298aa372e3fSPaul Mullowney tempT->column_indices->data().get(), 1299aa372e3fSPaul Mullowney tempT->row_offsets->data().get(), 130057d48284SJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase);CHKERRCUSPARSE(stat); 1301aa372e3fSPaul Mullowney 1302aa372e3fSPaul Mullowney /* Last, convert CSC to HYB */ 1303aa372e3fSPaul Mullowney cusparseHybMat_t hybMat; 130457d48284SJunchao Zhang stat = cusparseCreateHybMat(&hybMat);CHKERRCUSPARSE(stat); 1305aa372e3fSPaul Mullowney cusparseHybPartition_t partition = cusparsestruct->format==MAT_CUSPARSE_ELL ? 1306aa372e3fSPaul Mullowney CUSPARSE_HYB_PARTITION_MAX : CUSPARSE_HYB_PARTITION_AUTO; 1307aa372e3fSPaul Mullowney stat = cusparse_csr2hyb(cusparsestruct->handle, A->rmap->n, A->cmap->n, 1308aa372e3fSPaul Mullowney matstructT->descr, tempT->values->data().get(), 1309aa372e3fSPaul Mullowney tempT->row_offsets->data().get(), 1310aa372e3fSPaul Mullowney tempT->column_indices->data().get(), 131157d48284SJunchao Zhang hybMat, 0, partition);CHKERRCUSPARSE(stat); 1312aa372e3fSPaul Mullowney 1313aa372e3fSPaul Mullowney /* assign the pointer */ 1314aa372e3fSPaul Mullowney matstructT->mat = hybMat; 13151a2c6b5cSJunchao Zhang A->transupdated = PETSC_TRUE; 1316aa372e3fSPaul Mullowney /* delete temporaries */ 1317aa372e3fSPaul Mullowney if (tempT) { 1318aa372e3fSPaul Mullowney if (tempT->values) delete (THRUSTARRAY*) tempT->values; 1319aa372e3fSPaul Mullowney if (tempT->column_indices) delete (THRUSTINTARRAY32*) tempT->column_indices; 1320aa372e3fSPaul Mullowney if (tempT->row_offsets) delete (THRUSTINTARRAY32*) tempT->row_offsets; 1321aa372e3fSPaul Mullowney delete (CsrMatrix*) tempT; 1322087f3262SPaul Mullowney } 1323aa372e3fSPaul Mullowney if (temp) { 1324aa372e3fSPaul Mullowney if (temp->values) delete (THRUSTARRAY*) temp->values; 1325aa372e3fSPaul Mullowney if (temp->column_indices) delete (THRUSTINTARRAY32*) temp->column_indices; 1326aa372e3fSPaul Mullowney if (temp->row_offsets) delete (THRUSTINTARRAY32*) temp->row_offsets; 1327aa372e3fSPaul Mullowney delete (CsrMatrix*) temp; 1328aa372e3fSPaul Mullowney } 1329afb2bd1cSJunchao Zhang #endif 1330aa372e3fSPaul Mullowney } 1331a49f1ed0SStefano Zampini } 1332a49f1ed0SStefano Zampini if (cusparsestruct->format == MAT_CUSPARSE_CSR) { /* transpose mat struct may be already present, update data */ 1333a49f1ed0SStefano Zampini CsrMatrix *matrix = (CsrMatrix*)matstruct->mat; 1334a49f1ed0SStefano Zampini CsrMatrix *matrixT = (CsrMatrix*)matstructT->mat; 1335e8d2b73aSMark Adams if (!matrix) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix"); 1336e8d2b73aSMark Adams if (!matrix->row_offsets) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix rows"); 1337e8d2b73aSMark Adams if (!matrix->column_indices) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix cols"); 1338e8d2b73aSMark Adams if (!matrix->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrix values"); 1339e8d2b73aSMark Adams if (!matrixT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT"); 1340e8d2b73aSMark Adams if (!matrixT->row_offsets) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT rows"); 1341e8d2b73aSMark Adams if (!matrixT->column_indices) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT cols"); 1342e8d2b73aSMark Adams if (!matrixT->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CsrMatrixT values"); 1343a49f1ed0SStefano Zampini if (!cusparsestruct->rowoffsets_gpu) { /* this may be absent when we did not construct the transpose with csr2csc */ 1344a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n + 1); 1345a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu->assign(a->i,a->i + A->rmap->n + 1); 1346a49f1ed0SStefano Zampini ierr = PetscLogCpuToGpu((A->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 1347a49f1ed0SStefano Zampini } 1348a49f1ed0SStefano Zampini if (!cusparsestruct->csr2csc_i) { 1349a49f1ed0SStefano Zampini THRUSTARRAY csr2csc_a(matrix->num_entries); 1350a49f1ed0SStefano Zampini PetscStackCallThrust(thrust::sequence(thrust::device, csr2csc_a.begin(), csr2csc_a.end(), 0.0)); 1351a49f1ed0SStefano Zampini 1352a49f1ed0SStefano Zampini indexBase = cusparseGetMatIndexBase(matstruct->descr); 1353a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1354a49f1ed0SStefano Zampini void *csr2cscBuffer; 1355a49f1ed0SStefano Zampini size_t csr2cscBufferSize; 1356a49f1ed0SStefano Zampini stat = cusparseCsr2cscEx2_bufferSize(cusparsestruct->handle, A->rmap->n, 1357a49f1ed0SStefano Zampini A->cmap->n, matrix->num_entries, 1358a49f1ed0SStefano Zampini matrix->values->data().get(), 1359a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu->data().get(), 1360a49f1ed0SStefano Zampini matrix->column_indices->data().get(), 1361a49f1ed0SStefano Zampini matrixT->values->data().get(), 1362a49f1ed0SStefano Zampini matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), cusparse_scalartype, 1363a49f1ed0SStefano Zampini CUSPARSE_ACTION_NUMERIC,indexBase, 1364a49f1ed0SStefano Zampini cusparsestruct->csr2cscAlg, &csr2cscBufferSize);CHKERRCUSPARSE(stat); 1365a49f1ed0SStefano Zampini err = cudaMalloc(&csr2cscBuffer,csr2cscBufferSize);CHKERRCUDA(err); 1366a49f1ed0SStefano Zampini #endif 1367a49f1ed0SStefano Zampini 13681a2c6b5cSJunchao Zhang if (matrix->num_entries) { 13691a2c6b5cSJunchao Zhang /* When there are no nonzeros, this routine mistakenly returns CUSPARSE_STATUS_INVALID_VALUE in 13701a2c6b5cSJunchao Zhang mat_tests-ex62_15_mpiaijcusparse on ranks 0 and 2 with CUDA-11. But CUDA-10 is OK. 13711a2c6b5cSJunchao Zhang I checked every parameters and they were just fine. I have no clue why cusparse complains. 13721a2c6b5cSJunchao Zhang 13731a2c6b5cSJunchao Zhang Per https://docs.nvidia.com/cuda/cusparse/index.html#csr2cscEx2, when nnz = 0, matrixT->row_offsets[] 13741a2c6b5cSJunchao Zhang should be filled with indexBase. So I just take a shortcut here. 13751a2c6b5cSJunchao Zhang */ 13761a2c6b5cSJunchao Zhang stat = cusparse_csr2csc(cusparsestruct->handle, A->rmap->n, 13771a2c6b5cSJunchao Zhang A->cmap->n,matrix->num_entries, 13781a2c6b5cSJunchao Zhang csr2csc_a.data().get(), 13791a2c6b5cSJunchao Zhang cusparsestruct->rowoffsets_gpu->data().get(), 13801a2c6b5cSJunchao Zhang matrix->column_indices->data().get(), 1381a49f1ed0SStefano Zampini matrixT->values->data().get(), 1382a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1383a49f1ed0SStefano Zampini matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), cusparse_scalartype, 1384a49f1ed0SStefano Zampini CUSPARSE_ACTION_NUMERIC,indexBase, 13851a2c6b5cSJunchao Zhang cusparsestruct->csr2cscAlg, csr2cscBuffer);CHKERRCUSPARSE(stat); 1386a49f1ed0SStefano Zampini #else 1387a49f1ed0SStefano Zampini matrixT->column_indices->data().get(), matrixT->row_offsets->data().get(), 13881a2c6b5cSJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase);CHKERRCUSPARSE(stat); 1389a49f1ed0SStefano Zampini #endif 13901a2c6b5cSJunchao Zhang } else { 13911a2c6b5cSJunchao Zhang matrixT->row_offsets->assign(matrixT->row_offsets->size(),indexBase); 13921a2c6b5cSJunchao Zhang } 13931a2c6b5cSJunchao Zhang 1394a49f1ed0SStefano Zampini cusparsestruct->csr2csc_i = new THRUSTINTARRAY(matrix->num_entries); 1395a49f1ed0SStefano Zampini PetscStackCallThrust(thrust::transform(thrust::device,matrixT->values->begin(),matrixT->values->end(),cusparsestruct->csr2csc_i->begin(),PetscScalarToPetscInt())); 1396a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1397a49f1ed0SStefano Zampini err = cudaFree(csr2cscBuffer);CHKERRCUDA(err); 1398a49f1ed0SStefano Zampini #endif 1399a49f1ed0SStefano Zampini } 1400a49f1ed0SStefano Zampini PetscStackCallThrust(thrust::copy(thrust::device,thrust::make_permutation_iterator(matrix->values->begin(), cusparsestruct->csr2csc_i->begin()), 1401a49f1ed0SStefano Zampini thrust::make_permutation_iterator(matrix->values->begin(), cusparsestruct->csr2csc_i->end()), 1402a49f1ed0SStefano Zampini matrixT->values->begin())); 1403a49f1ed0SStefano Zampini } 1404ee7b52eaSHong Zhang ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 140585ba7357SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1406213423ffSJunchao Zhang /* the compressed row indices is not used for matTranspose */ 1407213423ffSJunchao Zhang matstructT->cprowIndices = NULL; 1408aa372e3fSPaul Mullowney /* assign the pointer */ 1409aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSE*)A->spptr)->matTranspose = matstructT; 14101a2c6b5cSJunchao Zhang A->transupdated = PETSC_TRUE; 1411bda325fcSPaul Mullowney PetscFunctionReturn(0); 1412bda325fcSPaul Mullowney } 1413bda325fcSPaul Mullowney 1414a49f1ed0SStefano Zampini /* Why do we need to analyze the transposed matrix again? Can't we just use op(A) = CUSPARSE_OPERATION_TRANSPOSE in MatSolve_SeqAIJCUSPARSE? */ 14156fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE(Mat A,Vec bb,Vec xx) 1416bda325fcSPaul Mullowney { 1417c41cb2e2SAlejandro Lamas Daviña PetscInt n = xx->map->n; 1418465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1419465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1420465f34aeSAlejandro Lamas Daviña thrust::device_ptr<const PetscScalar> bGPU; 1421465f34aeSAlejandro Lamas Daviña thrust::device_ptr<PetscScalar> xGPU; 1422bda325fcSPaul Mullowney cusparseStatus_t stat; 1423bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1424aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1425aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1426aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1427b175d8bbSPaul Mullowney PetscErrorCode ierr; 1428bda325fcSPaul Mullowney 1429bda325fcSPaul Mullowney PetscFunctionBegin; 1430aa372e3fSPaul Mullowney /* Analyze the matrix and create the transpose ... on the fly */ 1431aa372e3fSPaul Mullowney if (!loTriFactorT && !upTriFactorT) { 1432bda325fcSPaul Mullowney ierr = MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(A);CHKERRQ(ierr); 1433aa372e3fSPaul Mullowney loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1434aa372e3fSPaul Mullowney upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1435bda325fcSPaul Mullowney } 1436bda325fcSPaul Mullowney 1437bda325fcSPaul Mullowney /* Get the GPU pointers */ 1438c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1439c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 1440c41cb2e2SAlejandro Lamas Daviña xGPU = thrust::device_pointer_cast(xarray); 1441c41cb2e2SAlejandro Lamas Daviña bGPU = thrust::device_pointer_cast(barray); 1442bda325fcSPaul Mullowney 14437a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1444aa372e3fSPaul Mullowney /* First, reorder with the row permutation */ 1445a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->begin()), 1446c41cb2e2SAlejandro Lamas Daviña thrust::make_permutation_iterator(bGPU+n, cusparseTriFactors->rpermIndices->end()), 1447c41cb2e2SAlejandro Lamas Daviña xGPU); 1448aa372e3fSPaul Mullowney 1449aa372e3fSPaul Mullowney /* First, solve U */ 1450aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactorT->solveOp, 1451afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, 14521b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1453afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_entries, 1454afb2bd1cSJunchao Zhang #endif 1455afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactorT->descr, 1456aa372e3fSPaul Mullowney upTriFactorT->csrMat->values->data().get(), 1457aa372e3fSPaul Mullowney upTriFactorT->csrMat->row_offsets->data().get(), 1458aa372e3fSPaul Mullowney upTriFactorT->csrMat->column_indices->data().get(), 1459aa372e3fSPaul Mullowney upTriFactorT->solveInfo, 1460*d49cd2b7SBarry Smith xarray, 14611b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1462*d49cd2b7SBarry Smith tempGPU->data().get(), 1463*d49cd2b7SBarry Smith upTriFactorT->solvePolicy, upTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1464*d49cd2b7SBarry Smith #else 1465*d49cd2b7SBarry Smith tempGPU->data().get());CHKERRCUSPARSE(stat); 1466afb2bd1cSJunchao Zhang #endif 1467aa372e3fSPaul Mullowney 1468aa372e3fSPaul Mullowney /* Then, solve L */ 1469aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactorT->solveOp, 1470afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, 14711b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1472afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_entries, 1473afb2bd1cSJunchao Zhang #endif 1474afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactorT->descr, 1475aa372e3fSPaul Mullowney loTriFactorT->csrMat->values->data().get(), 1476aa372e3fSPaul Mullowney loTriFactorT->csrMat->row_offsets->data().get(), 1477aa372e3fSPaul Mullowney loTriFactorT->csrMat->column_indices->data().get(), 1478aa372e3fSPaul Mullowney loTriFactorT->solveInfo, 1479*d49cd2b7SBarry Smith tempGPU->data().get(), 14801b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1481*d49cd2b7SBarry Smith xarray, 1482*d49cd2b7SBarry Smith loTriFactorT->solvePolicy, loTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1483*d49cd2b7SBarry Smith #else 1484*d49cd2b7SBarry Smith xarray);CHKERRCUSPARSE(stat); 1485afb2bd1cSJunchao Zhang #endif 1486aa372e3fSPaul Mullowney 1487aa372e3fSPaul Mullowney /* Last, copy the solution, xGPU, into a temporary with the column permutation ... can't be done in place. */ 1488a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(xGPU, cusparseTriFactors->cpermIndices->begin()), 1489c41cb2e2SAlejandro Lamas Daviña thrust::make_permutation_iterator(xGPU+n, cusparseTriFactors->cpermIndices->end()), 1490aa372e3fSPaul Mullowney tempGPU->begin()); 1491aa372e3fSPaul Mullowney 1492aa372e3fSPaul Mullowney /* Copy the temporary to the full solution. */ 1493a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),tempGPU->begin(), tempGPU->end(), xGPU); 1494bda325fcSPaul Mullowney 1495bda325fcSPaul Mullowney /* restore */ 1496c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1497c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 1498661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1499958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 1500bda325fcSPaul Mullowney PetscFunctionReturn(0); 1501bda325fcSPaul Mullowney } 1502bda325fcSPaul Mullowney 15036fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering(Mat A,Vec bb,Vec xx) 1504bda325fcSPaul Mullowney { 1505465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1506465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1507bda325fcSPaul Mullowney cusparseStatus_t stat; 1508bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1509aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1510aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1511aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1512b175d8bbSPaul Mullowney PetscErrorCode ierr; 1513bda325fcSPaul Mullowney 1514bda325fcSPaul Mullowney PetscFunctionBegin; 1515aa372e3fSPaul Mullowney /* Analyze the matrix and create the transpose ... on the fly */ 1516aa372e3fSPaul Mullowney if (!loTriFactorT && !upTriFactorT) { 1517bda325fcSPaul Mullowney ierr = MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(A);CHKERRQ(ierr); 1518aa372e3fSPaul Mullowney loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1519aa372e3fSPaul Mullowney upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1520bda325fcSPaul Mullowney } 1521bda325fcSPaul Mullowney 1522bda325fcSPaul Mullowney /* Get the GPU pointers */ 1523c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1524c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 1525bda325fcSPaul Mullowney 15267a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1527aa372e3fSPaul Mullowney /* First, solve U */ 1528aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactorT->solveOp, 1529afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, 15301b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1531afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_entries, 1532afb2bd1cSJunchao Zhang #endif 1533afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactorT->descr, 1534aa372e3fSPaul Mullowney upTriFactorT->csrMat->values->data().get(), 1535aa372e3fSPaul Mullowney upTriFactorT->csrMat->row_offsets->data().get(), 1536aa372e3fSPaul Mullowney upTriFactorT->csrMat->column_indices->data().get(), 1537aa372e3fSPaul Mullowney upTriFactorT->solveInfo, 1538*d49cd2b7SBarry Smith barray, 15391b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1540*d49cd2b7SBarry Smith tempGPU->data().get(), 1541*d49cd2b7SBarry Smith upTriFactorT->solvePolicy, upTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1542*d49cd2b7SBarry Smith #else 1543*d49cd2b7SBarry Smith tempGPU->data().get());CHKERRCUSPARSE(stat); 1544afb2bd1cSJunchao Zhang #endif 1545aa372e3fSPaul Mullowney 1546aa372e3fSPaul Mullowney /* Then, solve L */ 1547aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactorT->solveOp, 1548afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, 15491b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1550afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_entries, 1551afb2bd1cSJunchao Zhang #endif 1552afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactorT->descr, 1553aa372e3fSPaul Mullowney loTriFactorT->csrMat->values->data().get(), 1554aa372e3fSPaul Mullowney loTriFactorT->csrMat->row_offsets->data().get(), 1555aa372e3fSPaul Mullowney loTriFactorT->csrMat->column_indices->data().get(), 1556aa372e3fSPaul Mullowney loTriFactorT->solveInfo, 1557*d49cd2b7SBarry Smith tempGPU->data().get(), 15581b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1559*d49cd2b7SBarry Smith xarray, 1560*d49cd2b7SBarry Smith loTriFactorT->solvePolicy, loTriFactorT->solveBuffer);CHKERRCUSPARSE(stat); 1561*d49cd2b7SBarry Smith #else 1562*d49cd2b7SBarry Smith xarray);CHKERRCUSPARSE(stat); 1563afb2bd1cSJunchao Zhang #endif 1564bda325fcSPaul Mullowney 1565bda325fcSPaul Mullowney /* restore */ 1566c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1567c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 1568661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1569958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 1570bda325fcSPaul Mullowney PetscFunctionReturn(0); 1571bda325fcSPaul Mullowney } 1572bda325fcSPaul Mullowney 15736fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE(Mat A,Vec bb,Vec xx) 15749ae82921SPaul Mullowney { 1575465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1576465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1577465f34aeSAlejandro Lamas Daviña thrust::device_ptr<const PetscScalar> bGPU; 1578465f34aeSAlejandro Lamas Daviña thrust::device_ptr<PetscScalar> xGPU; 15799ae82921SPaul Mullowney cusparseStatus_t stat; 15809ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1581aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 1582aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 1583aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1584b175d8bbSPaul Mullowney PetscErrorCode ierr; 15859ae82921SPaul Mullowney 15869ae82921SPaul Mullowney PetscFunctionBegin; 1587ebc8f436SDominic Meiser 1588e057df02SPaul Mullowney /* Get the GPU pointers */ 1589c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1590c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 1591c41cb2e2SAlejandro Lamas Daviña xGPU = thrust::device_pointer_cast(xarray); 1592c41cb2e2SAlejandro Lamas Daviña bGPU = thrust::device_pointer_cast(barray); 15939ae82921SPaul Mullowney 15947a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1595aa372e3fSPaul Mullowney /* First, reorder with the row permutation */ 1596a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->begin()), 1597c41cb2e2SAlejandro Lamas Daviña thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->end()), 15984e4bbfaaSStefano Zampini tempGPU->begin()); 1599aa372e3fSPaul Mullowney 1600aa372e3fSPaul Mullowney /* Next, solve L */ 1601aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactor->solveOp, 1602afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, 16031b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1604afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_entries, 1605afb2bd1cSJunchao Zhang #endif 1606afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactor->descr, 1607aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), 1608aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->data().get(), 1609aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->data().get(), 1610aa372e3fSPaul Mullowney loTriFactor->solveInfo, 1611*d49cd2b7SBarry Smith tempGPU->data().get(), 16121b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1613*d49cd2b7SBarry Smith xarray, 1614*d49cd2b7SBarry Smith loTriFactor->solvePolicy, loTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 1615*d49cd2b7SBarry Smith #else 1616*d49cd2b7SBarry Smith xarray);CHKERRCUSPARSE(stat); 1617afb2bd1cSJunchao Zhang #endif 1618aa372e3fSPaul Mullowney 1619aa372e3fSPaul Mullowney /* Then, solve U */ 1620aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactor->solveOp, 1621afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, 16221b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1623afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_entries, 1624afb2bd1cSJunchao Zhang #endif 1625afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactor->descr, 1626aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), 1627aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->data().get(), 1628aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->data().get(), 1629*d49cd2b7SBarry Smith upTriFactor->solveInfo,xarray, 16301b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1631*d49cd2b7SBarry Smith tempGPU->data().get(), 1632*d49cd2b7SBarry Smith upTriFactor->solvePolicy, upTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 1633*d49cd2b7SBarry Smith #else 1634*d49cd2b7SBarry Smith tempGPU->data().get());CHKERRCUSPARSE(stat); 1635afb2bd1cSJunchao Zhang #endif 1636*d49cd2b7SBarry Smith 1637aa372e3fSPaul Mullowney 16384e4bbfaaSStefano Zampini /* Last, reorder with the column permutation */ 1639a0e72f99SJunchao Zhang thrust::copy(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_permutation_iterator(tempGPU->begin(), cusparseTriFactors->cpermIndices->begin()), 16404e4bbfaaSStefano Zampini thrust::make_permutation_iterator(tempGPU->begin(), cusparseTriFactors->cpermIndices->end()), 16414e4bbfaaSStefano Zampini xGPU); 16429ae82921SPaul Mullowney 1643c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1644c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 1645661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1646958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 16479ae82921SPaul Mullowney PetscFunctionReturn(0); 16489ae82921SPaul Mullowney } 16499ae82921SPaul Mullowney 16506fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE_NaturalOrdering(Mat A,Vec bb,Vec xx) 16519ae82921SPaul Mullowney { 1652465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1653465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 16549ae82921SPaul Mullowney cusparseStatus_t stat; 16559ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1656aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 1657aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 1658aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1659b175d8bbSPaul Mullowney PetscErrorCode ierr; 16609ae82921SPaul Mullowney 16619ae82921SPaul Mullowney PetscFunctionBegin; 1662e057df02SPaul Mullowney /* Get the GPU pointers */ 1663c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1664c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 16659ae82921SPaul Mullowney 16667a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1667aa372e3fSPaul Mullowney /* First, solve L */ 1668aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactor->solveOp, 1669afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, 16701b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1671afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_entries, 1672afb2bd1cSJunchao Zhang #endif 1673afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactor->descr, 1674aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), 1675aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->data().get(), 1676aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->data().get(), 1677aa372e3fSPaul Mullowney loTriFactor->solveInfo, 1678*d49cd2b7SBarry Smith barray, 16791b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1680*d49cd2b7SBarry Smith tempGPU->data().get(), 1681*d49cd2b7SBarry Smith loTriFactor->solvePolicy,loTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 1682*d49cd2b7SBarry Smith #else 1683*d49cd2b7SBarry Smith tempGPU->data().get());CHKERRCUSPARSE(stat); 1684afb2bd1cSJunchao Zhang #endif 1685*d49cd2b7SBarry Smith 1686aa372e3fSPaul Mullowney 1687aa372e3fSPaul Mullowney /* Next, solve U */ 1688aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactor->solveOp, 1689afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, 16901b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1691afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_entries, 1692afb2bd1cSJunchao Zhang #endif 1693afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactor->descr, 1694aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), 1695aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->data().get(), 1696aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->data().get(), 1697aa372e3fSPaul Mullowney upTriFactor->solveInfo, 1698*d49cd2b7SBarry Smith tempGPU->data().get(), 16991b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1700*d49cd2b7SBarry Smith xarray, 1701*d49cd2b7SBarry Smith upTriFactor->solvePolicy, upTriFactor->solveBuffer);CHKERRCUSPARSE(stat); 1702*d49cd2b7SBarry Smith #else 1703*d49cd2b7SBarry Smith xarray);CHKERRCUSPARSE(stat); 1704afb2bd1cSJunchao Zhang #endif 17059ae82921SPaul Mullowney 1706c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1707c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 1708661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1709958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 17109ae82921SPaul Mullowney PetscFunctionReturn(0); 17119ae82921SPaul Mullowney } 17129ae82921SPaul Mullowney 17137e8381f9SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSECopyFromGPU(Mat A) 17147e8381f9SStefano Zampini { 17157e8381f9SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 17167e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 17177e8381f9SStefano Zampini cudaError_t cerr; 17187e8381f9SStefano Zampini PetscErrorCode ierr; 17197e8381f9SStefano Zampini 17207e8381f9SStefano Zampini PetscFunctionBegin; 17217e8381f9SStefano Zampini if (A->offloadmask == PETSC_OFFLOAD_GPU) { 17227e8381f9SStefano Zampini CsrMatrix *matrix = (CsrMatrix*)cusp->mat->mat; 17237e8381f9SStefano Zampini 17247e8381f9SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSECopyFromGPU,A,0,0,0);CHKERRQ(ierr); 17257e8381f9SStefano Zampini cerr = cudaMemcpy(a->a, matrix->values->data().get(), a->nz*sizeof(PetscScalar), cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 17267e8381f9SStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 17277e8381f9SStefano Zampini ierr = PetscLogGpuToCpu(a->nz*sizeof(PetscScalar));CHKERRQ(ierr); 17287e8381f9SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSECopyFromGPU,A,0,0,0);CHKERRQ(ierr); 17297e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_BOTH; 17307e8381f9SStefano Zampini } 17317e8381f9SStefano Zampini PetscFunctionReturn(0); 17327e8381f9SStefano Zampini } 17337e8381f9SStefano Zampini 17347e8381f9SStefano Zampini static PetscErrorCode MatSeqAIJGetArray_SeqAIJCUSPARSE(Mat A,PetscScalar *array[]) 17357e8381f9SStefano Zampini { 17367e8381f9SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 17377e8381f9SStefano Zampini PetscErrorCode ierr; 17387e8381f9SStefano Zampini 17397e8381f9SStefano Zampini PetscFunctionBegin; 17407e8381f9SStefano Zampini ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 17417e8381f9SStefano Zampini *array = a->a; 17427e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_CPU; 17437e8381f9SStefano Zampini PetscFunctionReturn(0); 17447e8381f9SStefano Zampini } 17457e8381f9SStefano Zampini 17466fa9248bSJed Brown static PetscErrorCode MatSeqAIJCUSPARSECopyToGPU(Mat A) 17479ae82921SPaul Mullowney { 1748aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 17497c700b8dSJunchao Zhang Mat_SeqAIJCUSPARSEMultStruct *matstruct = cusparsestruct->mat; 17509ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 1751213423ffSJunchao Zhang PetscInt m = A->rmap->n,*ii,*ridx,tmp; 17529ae82921SPaul Mullowney PetscErrorCode ierr; 1753aa372e3fSPaul Mullowney cusparseStatus_t stat; 1754abb89eb1SStefano Zampini PetscBool both = PETSC_TRUE; 1755b06137fdSPaul Mullowney cudaError_t err; 17569ae82921SPaul Mullowney 17579ae82921SPaul Mullowney PetscFunctionBegin; 1758e8d2b73aSMark Adams if (A->boundtocpu) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Cannot copy to GPU"); 1759c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 1760a49f1ed0SStefano Zampini if (A->nonzerostate == cusparsestruct->nonzerostate && cusparsestruct->format == MAT_CUSPARSE_CSR) { /* Copy values only */ 1761a49f1ed0SStefano Zampini CsrMatrix *matrix; 1762afb2bd1cSJunchao Zhang matrix = (CsrMatrix*)cusparsestruct->mat->mat; 176385ba7357SStefano Zampini 1764e8d2b73aSMark Adams if (a->nz && !a->a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CSR values"); 176585ba7357SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 1766afb2bd1cSJunchao Zhang matrix->values->assign(a->a, a->a+a->nz); 176705035670SJunchao Zhang err = WaitForCUDA();CHKERRCUDA(err); 17684863603aSSatish Balay ierr = PetscLogCpuToGpu((a->nz)*sizeof(PetscScalar));CHKERRQ(ierr); 176985ba7357SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 1770a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_FALSE);CHKERRQ(ierr); 177134d6c7a5SJose E. Roman } else { 1772abb89eb1SStefano Zampini PetscInt nnz; 177385ba7357SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 17747c700b8dSJunchao Zhang ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&cusparsestruct->mat,cusparsestruct->format);CHKERRQ(ierr); 1775a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr); 17767c700b8dSJunchao Zhang delete cusparsestruct->workVector; 177781902715SJunchao Zhang delete cusparsestruct->rowoffsets_gpu; 1778a49f1ed0SStefano Zampini cusparsestruct->workVector = NULL; 1779a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu = NULL; 17809ae82921SPaul Mullowney try { 17819ae82921SPaul Mullowney if (a->compressedrow.use) { 17829ae82921SPaul Mullowney m = a->compressedrow.nrows; 17839ae82921SPaul Mullowney ii = a->compressedrow.i; 17849ae82921SPaul Mullowney ridx = a->compressedrow.rindex; 17859ae82921SPaul Mullowney } else { 1786213423ffSJunchao Zhang m = A->rmap->n; 1787213423ffSJunchao Zhang ii = a->i; 1788e6e9a74fSStefano Zampini ridx = NULL; 17899ae82921SPaul Mullowney } 1790e8d2b73aSMark Adams if (!ii) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CSR row data"); 1791e8d2b73aSMark Adams if (m && !a->j) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_GPU,"Missing CSR column data"); 1792abb89eb1SStefano Zampini if (!a->a) { nnz = ii[m]; both = PETSC_FALSE; } 1793abb89eb1SStefano Zampini else nnz = a->nz; 17949ae82921SPaul Mullowney 179585ba7357SStefano Zampini /* create cusparse matrix */ 1796abb89eb1SStefano Zampini cusparsestruct->nrows = m; 1797aa372e3fSPaul Mullowney matstruct = new Mat_SeqAIJCUSPARSEMultStruct; 179857d48284SJunchao Zhang stat = cusparseCreateMatDescr(&matstruct->descr);CHKERRCUSPARSE(stat); 179957d48284SJunchao Zhang stat = cusparseSetMatIndexBase(matstruct->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 180057d48284SJunchao Zhang stat = cusparseSetMatType(matstruct->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 18019ae82921SPaul Mullowney 1802afb2bd1cSJunchao Zhang err = cudaMalloc((void **)&(matstruct->alpha_one),sizeof(PetscScalar));CHKERRCUDA(err); 18037656d835SStefano Zampini err = cudaMalloc((void **)&(matstruct->beta_zero),sizeof(PetscScalar));CHKERRCUDA(err); 18047656d835SStefano Zampini err = cudaMalloc((void **)&(matstruct->beta_one), sizeof(PetscScalar));CHKERRCUDA(err); 1805afb2bd1cSJunchao Zhang err = cudaMemcpy(matstruct->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 18067656d835SStefano Zampini err = cudaMemcpy(matstruct->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 18077656d835SStefano Zampini err = cudaMemcpy(matstruct->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 180857d48284SJunchao Zhang stat = cusparseSetPointerMode(cusparsestruct->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 1809b06137fdSPaul Mullowney 1810aa372e3fSPaul Mullowney /* Build a hybrid/ellpack matrix if this option is chosen for the storage */ 1811aa372e3fSPaul Mullowney if (cusparsestruct->format==MAT_CUSPARSE_CSR) { 1812aa372e3fSPaul Mullowney /* set the matrix */ 1813afb2bd1cSJunchao Zhang CsrMatrix *mat= new CsrMatrix; 1814afb2bd1cSJunchao Zhang mat->num_rows = m; 1815afb2bd1cSJunchao Zhang mat->num_cols = A->cmap->n; 1816abb89eb1SStefano Zampini mat->num_entries = nnz; 1817afb2bd1cSJunchao Zhang mat->row_offsets = new THRUSTINTARRAY32(m+1); 1818afb2bd1cSJunchao Zhang mat->row_offsets->assign(ii, ii + m+1); 18199ae82921SPaul Mullowney 1820abb89eb1SStefano Zampini mat->column_indices = new THRUSTINTARRAY32(nnz); 1821abb89eb1SStefano Zampini mat->column_indices->assign(a->j, a->j+nnz); 1822aa372e3fSPaul Mullowney 1823abb89eb1SStefano Zampini mat->values = new THRUSTARRAY(nnz); 1824abb89eb1SStefano Zampini if (a->a) mat->values->assign(a->a, a->a+nnz); 1825aa372e3fSPaul Mullowney 1826aa372e3fSPaul Mullowney /* assign the pointer */ 1827afb2bd1cSJunchao Zhang matstruct->mat = mat; 1828afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1829afb2bd1cSJunchao Zhang if (mat->num_rows) { /* cusparse errors on empty matrices! */ 1830afb2bd1cSJunchao Zhang stat = cusparseCreateCsr(&matstruct->matDescr, 1831afb2bd1cSJunchao Zhang mat->num_rows, mat->num_cols, mat->num_entries, 1832afb2bd1cSJunchao Zhang mat->row_offsets->data().get(), mat->column_indices->data().get(), 1833afb2bd1cSJunchao Zhang mat->values->data().get(), 1834afb2bd1cSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, /* row offset, col idx types due to THRUSTINTARRAY32 */ 1835afb2bd1cSJunchao Zhang CUSPARSE_INDEX_BASE_ZERO,cusparse_scalartype);CHKERRCUSPARSE(stat); 1836afb2bd1cSJunchao Zhang } 1837afb2bd1cSJunchao Zhang #endif 1838aa372e3fSPaul Mullowney } else if (cusparsestruct->format==MAT_CUSPARSE_ELL || cusparsestruct->format==MAT_CUSPARSE_HYB) { 1839afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1840afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 1841afb2bd1cSJunchao Zhang #else 1842afb2bd1cSJunchao Zhang CsrMatrix *mat= new CsrMatrix; 1843afb2bd1cSJunchao Zhang mat->num_rows = m; 1844afb2bd1cSJunchao Zhang mat->num_cols = A->cmap->n; 1845abb89eb1SStefano Zampini mat->num_entries = nnz; 1846afb2bd1cSJunchao Zhang mat->row_offsets = new THRUSTINTARRAY32(m+1); 1847afb2bd1cSJunchao Zhang mat->row_offsets->assign(ii, ii + m+1); 1848aa372e3fSPaul Mullowney 1849abb89eb1SStefano Zampini mat->column_indices = new THRUSTINTARRAY32(nnz); 1850abb89eb1SStefano Zampini mat->column_indices->assign(a->j, a->j+nnz); 1851aa372e3fSPaul Mullowney 1852abb89eb1SStefano Zampini mat->values = new THRUSTARRAY(nnz); 1853abb89eb1SStefano Zampini if (a->a) mat->values->assign(a->a, a->a+nnz); 1854aa372e3fSPaul Mullowney 1855aa372e3fSPaul Mullowney cusparseHybMat_t hybMat; 185657d48284SJunchao Zhang stat = cusparseCreateHybMat(&hybMat);CHKERRCUSPARSE(stat); 1857aa372e3fSPaul Mullowney cusparseHybPartition_t partition = cusparsestruct->format==MAT_CUSPARSE_ELL ? 1858aa372e3fSPaul Mullowney CUSPARSE_HYB_PARTITION_MAX : CUSPARSE_HYB_PARTITION_AUTO; 1859afb2bd1cSJunchao Zhang stat = cusparse_csr2hyb(cusparsestruct->handle, mat->num_rows, mat->num_cols, 1860afb2bd1cSJunchao Zhang matstruct->descr, mat->values->data().get(), 1861afb2bd1cSJunchao Zhang mat->row_offsets->data().get(), 1862afb2bd1cSJunchao Zhang mat->column_indices->data().get(), 186357d48284SJunchao Zhang hybMat, 0, partition);CHKERRCUSPARSE(stat); 1864aa372e3fSPaul Mullowney /* assign the pointer */ 1865aa372e3fSPaul Mullowney matstruct->mat = hybMat; 1866aa372e3fSPaul Mullowney 1867afb2bd1cSJunchao Zhang if (mat) { 1868afb2bd1cSJunchao Zhang if (mat->values) delete (THRUSTARRAY*)mat->values; 1869afb2bd1cSJunchao Zhang if (mat->column_indices) delete (THRUSTINTARRAY32*)mat->column_indices; 1870afb2bd1cSJunchao Zhang if (mat->row_offsets) delete (THRUSTINTARRAY32*)mat->row_offsets; 1871afb2bd1cSJunchao Zhang delete (CsrMatrix*)mat; 1872087f3262SPaul Mullowney } 1873afb2bd1cSJunchao Zhang #endif 1874087f3262SPaul Mullowney } 1875ca45077fSPaul Mullowney 1876aa372e3fSPaul Mullowney /* assign the compressed row indices */ 1877213423ffSJunchao Zhang if (a->compressedrow.use) { 1878213423ffSJunchao Zhang cusparsestruct->workVector = new THRUSTARRAY(m); 1879aa372e3fSPaul Mullowney matstruct->cprowIndices = new THRUSTINTARRAY(m); 1880aa372e3fSPaul Mullowney matstruct->cprowIndices->assign(ridx,ridx+m); 1881213423ffSJunchao Zhang tmp = m; 1882213423ffSJunchao Zhang } else { 1883213423ffSJunchao Zhang cusparsestruct->workVector = NULL; 1884213423ffSJunchao Zhang matstruct->cprowIndices = NULL; 1885213423ffSJunchao Zhang tmp = 0; 1886213423ffSJunchao Zhang } 1887213423ffSJunchao Zhang ierr = PetscLogCpuToGpu(((m+1)+(a->nz))*sizeof(int)+tmp*sizeof(PetscInt)+(3+(a->nz))*sizeof(PetscScalar));CHKERRQ(ierr); 1888aa372e3fSPaul Mullowney 1889aa372e3fSPaul Mullowney /* assign the pointer */ 1890aa372e3fSPaul Mullowney cusparsestruct->mat = matstruct; 18919ae82921SPaul Mullowney } catch(char *ex) { 18929ae82921SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 18939ae82921SPaul Mullowney } 189405035670SJunchao Zhang err = WaitForCUDA();CHKERRCUDA(err); 189585ba7357SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 189634d6c7a5SJose E. Roman cusparsestruct->nonzerostate = A->nonzerostate; 189734d6c7a5SJose E. Roman } 1898abb89eb1SStefano Zampini if (both) A->offloadmask = PETSC_OFFLOAD_BOTH; 18999ae82921SPaul Mullowney } 19009ae82921SPaul Mullowney PetscFunctionReturn(0); 19019ae82921SPaul Mullowney } 19029ae82921SPaul Mullowney 1903c41cb2e2SAlejandro Lamas Daviña struct VecCUDAPlusEquals 1904aa372e3fSPaul Mullowney { 1905aa372e3fSPaul Mullowney template <typename Tuple> 1906aa372e3fSPaul Mullowney __host__ __device__ 1907aa372e3fSPaul Mullowney void operator()(Tuple t) 1908aa372e3fSPaul Mullowney { 1909aa372e3fSPaul Mullowney thrust::get<1>(t) = thrust::get<1>(t) + thrust::get<0>(t); 1910aa372e3fSPaul Mullowney } 1911aa372e3fSPaul Mullowney }; 1912aa372e3fSPaul Mullowney 19137e8381f9SStefano Zampini struct VecCUDAEquals 19147e8381f9SStefano Zampini { 19157e8381f9SStefano Zampini template <typename Tuple> 19167e8381f9SStefano Zampini __host__ __device__ 19177e8381f9SStefano Zampini void operator()(Tuple t) 19187e8381f9SStefano Zampini { 19197e8381f9SStefano Zampini thrust::get<1>(t) = thrust::get<0>(t); 19207e8381f9SStefano Zampini } 19217e8381f9SStefano Zampini }; 19227e8381f9SStefano Zampini 1923e6e9a74fSStefano Zampini struct VecCUDAEqualsReverse 1924e6e9a74fSStefano Zampini { 1925e6e9a74fSStefano Zampini template <typename Tuple> 1926e6e9a74fSStefano Zampini __host__ __device__ 1927e6e9a74fSStefano Zampini void operator()(Tuple t) 1928e6e9a74fSStefano Zampini { 1929e6e9a74fSStefano Zampini thrust::get<0>(t) = thrust::get<1>(t); 1930e6e9a74fSStefano Zampini } 1931e6e9a74fSStefano Zampini }; 1932e6e9a74fSStefano Zampini 1933afb2bd1cSJunchao Zhang struct MatMatCusparse { 1934ccdfe979SStefano Zampini PetscBool cisdense; 1935ccdfe979SStefano Zampini PetscScalar *Bt; 1936ccdfe979SStefano Zampini Mat X; 1937fcdce8c4SStefano Zampini PetscBool reusesym; /* Cusparse does not have split symbolic and numeric phases for sparse matmat operations */ 1938fcdce8c4SStefano Zampini PetscLogDouble flops; 1939fcdce8c4SStefano Zampini CsrMatrix *Bcsr; 1940afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1941fcdce8c4SStefano Zampini cusparseSpMatDescr_t matSpBDescr; 1942afb2bd1cSJunchao Zhang PetscBool initialized; /* C = alpha op(A) op(B) + beta C */ 1943afb2bd1cSJunchao Zhang cusparseDnMatDescr_t matBDescr; 1944afb2bd1cSJunchao Zhang cusparseDnMatDescr_t matCDescr; 1945afb2bd1cSJunchao Zhang PetscInt Blda,Clda; /* Record leading dimensions of B and C here to detect changes*/ 1946fcdce8c4SStefano Zampini size_t mmBufferSize; 1947fcdce8c4SStefano Zampini void *mmBuffer; 1948fcdce8c4SStefano Zampini void *mmBuffer2; /* SpGEMM WorkEstimation buffer */ 1949fcdce8c4SStefano Zampini cusparseSpGEMMDescr_t spgemmDesc; 1950afb2bd1cSJunchao Zhang #endif 1951afb2bd1cSJunchao Zhang }; 1952ccdfe979SStefano Zampini 1953ccdfe979SStefano Zampini static PetscErrorCode MatDestroy_MatMatCusparse(void *data) 1954ccdfe979SStefano Zampini { 1955ccdfe979SStefano Zampini PetscErrorCode ierr; 1956ccdfe979SStefano Zampini MatMatCusparse *mmdata = (MatMatCusparse *)data; 1957ccdfe979SStefano Zampini cudaError_t cerr; 1958fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1959fcdce8c4SStefano Zampini cusparseStatus_t stat; 1960fcdce8c4SStefano Zampini #endif 1961ccdfe979SStefano Zampini 1962ccdfe979SStefano Zampini PetscFunctionBegin; 1963ccdfe979SStefano Zampini cerr = cudaFree(mmdata->Bt);CHKERRCUDA(cerr); 1964fcdce8c4SStefano Zampini delete mmdata->Bcsr; 1965afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1966fcdce8c4SStefano Zampini if (mmdata->matSpBDescr) { stat = cusparseDestroySpMat(mmdata->matSpBDescr);CHKERRCUSPARSE(stat); } 1967fcdce8c4SStefano Zampini if (mmdata->mmBuffer) { cerr = cudaFree(mmdata->mmBuffer);CHKERRCUDA(cerr); } 1968fcdce8c4SStefano Zampini if (mmdata->mmBuffer2) { cerr = cudaFree(mmdata->mmBuffer2);CHKERRCUDA(cerr); } 1969afb2bd1cSJunchao Zhang if (mmdata->matBDescr) { stat = cusparseDestroyDnMat(mmdata->matBDescr);CHKERRCUSPARSE(stat); } 1970afb2bd1cSJunchao Zhang if (mmdata->matCDescr) { stat = cusparseDestroyDnMat(mmdata->matCDescr);CHKERRCUSPARSE(stat); } 1971fcdce8c4SStefano Zampini if (mmdata->spgemmDesc) { stat = cusparseSpGEMM_destroyDescr(mmdata->spgemmDesc);CHKERRCUSPARSE(stat); } 1972afb2bd1cSJunchao Zhang #endif 1973ccdfe979SStefano Zampini ierr = MatDestroy(&mmdata->X);CHKERRQ(ierr); 1974ccdfe979SStefano Zampini ierr = PetscFree(data);CHKERRQ(ierr); 1975ccdfe979SStefano Zampini PetscFunctionReturn(0); 1976ccdfe979SStefano Zampini } 1977ccdfe979SStefano Zampini 1978ccdfe979SStefano Zampini PETSC_INTERN PetscErrorCode MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Private(Mat,Mat,Mat,PetscBool,PetscBool); 1979ccdfe979SStefano Zampini 1980ccdfe979SStefano Zampini static PetscErrorCode MatProductNumeric_SeqAIJCUSPARSE_SeqDENSECUDA(Mat C) 1981ccdfe979SStefano Zampini { 1982ccdfe979SStefano Zampini Mat_Product *product = C->product; 1983ccdfe979SStefano Zampini Mat A,B; 1984afb2bd1cSJunchao Zhang PetscInt m,n,blda,clda; 1985ccdfe979SStefano Zampini PetscBool flg,biscuda; 1986ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSE *cusp; 1987ccdfe979SStefano Zampini cusparseStatus_t stat; 1988ccdfe979SStefano Zampini cusparseOperation_t opA; 1989ccdfe979SStefano Zampini const PetscScalar *barray; 1990ccdfe979SStefano Zampini PetscScalar *carray; 1991ccdfe979SStefano Zampini PetscErrorCode ierr; 1992ccdfe979SStefano Zampini MatMatCusparse *mmdata; 1993ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *mat; 1994ccdfe979SStefano Zampini CsrMatrix *csrmat; 1995ccdfe979SStefano Zampini 1996ccdfe979SStefano Zampini PetscFunctionBegin; 1997ccdfe979SStefano Zampini MatCheckProduct(C,1); 1998e8d2b73aSMark Adams if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data empty"); 1999ccdfe979SStefano Zampini mmdata = (MatMatCusparse*)product->data; 2000ccdfe979SStefano Zampini A = product->A; 2001ccdfe979SStefano Zampini B = product->B; 2002ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2003e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)A),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 2004ccdfe979SStefano Zampini /* currently CopyToGpu does not copy if the matrix is bound to CPU 2005ccdfe979SStefano Zampini Instead of silently accepting the wrong answer, I prefer to raise the error */ 2006ccdfe979SStefano Zampini if (A->boundtocpu) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONG,"Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 2007ccdfe979SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 2008ccdfe979SStefano Zampini cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2009ccdfe979SStefano Zampini switch (product->type) { 2010ccdfe979SStefano Zampini case MATPRODUCT_AB: 2011ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 2012ccdfe979SStefano Zampini mat = cusp->mat; 2013ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2014ccdfe979SStefano Zampini m = A->rmap->n; 2015ccdfe979SStefano Zampini n = B->cmap->n; 2016ccdfe979SStefano Zampini break; 2017ccdfe979SStefano Zampini case MATPRODUCT_AtB: 20181a2c6b5cSJunchao Zhang if (!A->form_explicit_transpose) { 2019e6e9a74fSStefano Zampini mat = cusp->mat; 2020e6e9a74fSStefano Zampini opA = CUSPARSE_OPERATION_TRANSPOSE; 2021e6e9a74fSStefano Zampini } else { 20221a2c6b5cSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTransposeForMult(A);CHKERRQ(ierr); 2023ccdfe979SStefano Zampini mat = cusp->matTranspose; 2024ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2025e6e9a74fSStefano Zampini } 2026ccdfe979SStefano Zampini m = A->cmap->n; 2027ccdfe979SStefano Zampini n = B->cmap->n; 2028ccdfe979SStefano Zampini break; 2029ccdfe979SStefano Zampini case MATPRODUCT_ABt: 2030ccdfe979SStefano Zampini case MATPRODUCT_RARt: 2031ccdfe979SStefano Zampini mat = cusp->mat; 2032ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2033ccdfe979SStefano Zampini m = A->rmap->n; 2034ccdfe979SStefano Zampini n = B->rmap->n; 2035ccdfe979SStefano Zampini break; 2036ccdfe979SStefano Zampini default: 2037e8d2b73aSMark Adams SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 2038ccdfe979SStefano Zampini } 2039e8d2b73aSMark Adams if (!mat) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 2040ccdfe979SStefano Zampini csrmat = (CsrMatrix*)mat->mat; 2041ccdfe979SStefano Zampini /* if the user passed a CPU matrix, copy the data to the GPU */ 2042ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)B,MATSEQDENSECUDA,&biscuda);CHKERRQ(ierr); 2043afb2bd1cSJunchao Zhang if (!biscuda) {ierr = MatConvert(B,MATSEQDENSECUDA,MAT_INPLACE_MATRIX,&B);CHKERRQ(ierr);} 2044ccdfe979SStefano Zampini ierr = MatDenseCUDAGetArrayRead(B,&barray);CHKERRQ(ierr); 2045afb2bd1cSJunchao Zhang 2046ccdfe979SStefano Zampini ierr = MatDenseGetLDA(B,&blda);CHKERRQ(ierr); 2047c8378d12SStefano Zampini if (product->type == MATPRODUCT_RARt || product->type == MATPRODUCT_PtAP) { 2048c8378d12SStefano Zampini ierr = MatDenseCUDAGetArrayWrite(mmdata->X,&carray);CHKERRQ(ierr); 2049c8378d12SStefano Zampini ierr = MatDenseGetLDA(mmdata->X,&clda);CHKERRQ(ierr); 2050c8378d12SStefano Zampini } else { 2051c8378d12SStefano Zampini ierr = MatDenseCUDAGetArrayWrite(C,&carray);CHKERRQ(ierr); 2052c8378d12SStefano Zampini ierr = MatDenseGetLDA(C,&clda);CHKERRQ(ierr); 2053c8378d12SStefano Zampini } 2054c8378d12SStefano Zampini 2055c8378d12SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2056afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2057afb2bd1cSJunchao Zhang cusparseOperation_t opB = (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) ? CUSPARSE_OPERATION_TRANSPOSE : CUSPARSE_OPERATION_NON_TRANSPOSE; 2058fcdce8c4SStefano Zampini /* (re)allcoate mmBuffer if not initialized or LDAs are different */ 2059afb2bd1cSJunchao Zhang if (!mmdata->initialized || mmdata->Blda != blda || mmdata->Clda != clda) { 2060fcdce8c4SStefano Zampini size_t mmBufferSize; 2061afb2bd1cSJunchao Zhang if (mmdata->initialized && mmdata->Blda != blda) {stat = cusparseDestroyDnMat(mmdata->matBDescr);CHKERRCUSPARSE(stat); mmdata->matBDescr = NULL;} 2062afb2bd1cSJunchao Zhang if (!mmdata->matBDescr) { 2063afb2bd1cSJunchao Zhang stat = cusparseCreateDnMat(&mmdata->matBDescr,B->rmap->n,B->cmap->n,blda,(void*)barray,cusparse_scalartype,CUSPARSE_ORDER_COL);CHKERRCUSPARSE(stat); 2064afb2bd1cSJunchao Zhang mmdata->Blda = blda; 2065afb2bd1cSJunchao Zhang } 2066c8378d12SStefano Zampini 2067afb2bd1cSJunchao Zhang if (mmdata->initialized && mmdata->Clda != clda) {stat = cusparseDestroyDnMat(mmdata->matCDescr);CHKERRCUSPARSE(stat); mmdata->matCDescr = NULL;} 2068afb2bd1cSJunchao Zhang if (!mmdata->matCDescr) { /* matCDescr is for C or mmdata->X */ 2069afb2bd1cSJunchao Zhang stat = cusparseCreateDnMat(&mmdata->matCDescr,m,n,clda,(void*)carray,cusparse_scalartype,CUSPARSE_ORDER_COL);CHKERRCUSPARSE(stat); 2070afb2bd1cSJunchao Zhang mmdata->Clda = clda; 2071afb2bd1cSJunchao Zhang } 2072afb2bd1cSJunchao Zhang 2073afb2bd1cSJunchao Zhang if (!mat->matDescr) { 2074afb2bd1cSJunchao Zhang stat = cusparseCreateCsr(&mat->matDescr, 2075afb2bd1cSJunchao Zhang csrmat->num_rows, csrmat->num_cols, csrmat->num_entries, 2076afb2bd1cSJunchao Zhang csrmat->row_offsets->data().get(), csrmat->column_indices->data().get(), 2077afb2bd1cSJunchao Zhang csrmat->values->data().get(), 2078afb2bd1cSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, /* row offset, col idx types due to THRUSTINTARRAY32 */ 2079afb2bd1cSJunchao Zhang CUSPARSE_INDEX_BASE_ZERO,cusparse_scalartype);CHKERRCUSPARSE(stat); 2080afb2bd1cSJunchao Zhang } 2081afb2bd1cSJunchao Zhang stat = cusparseSpMM_bufferSize(cusp->handle,opA,opB,mat->alpha_one, 2082afb2bd1cSJunchao Zhang mat->matDescr,mmdata->matBDescr,mat->beta_zero, 2083afb2bd1cSJunchao Zhang mmdata->matCDescr,cusparse_scalartype, 2084fcdce8c4SStefano Zampini cusp->spmmAlg,&mmBufferSize);CHKERRCUSPARSE(stat); 2085fcdce8c4SStefano Zampini if ((mmdata->mmBuffer && mmdata->mmBufferSize < mmBufferSize) || !mmdata->mmBuffer) { 2086ee7b52eaSHong Zhang cudaError_t cerr; 2087fcdce8c4SStefano Zampini cerr = cudaFree(mmdata->mmBuffer);CHKERRCUDA(cerr); 2088fcdce8c4SStefano Zampini cerr = cudaMalloc(&mmdata->mmBuffer,mmBufferSize);CHKERRCUDA(cerr); 2089fcdce8c4SStefano Zampini mmdata->mmBufferSize = mmBufferSize; 2090fcdce8c4SStefano Zampini } 2091afb2bd1cSJunchao Zhang mmdata->initialized = PETSC_TRUE; 2092afb2bd1cSJunchao Zhang } else { 2093afb2bd1cSJunchao Zhang /* to be safe, always update pointers of the mats */ 2094afb2bd1cSJunchao Zhang stat = cusparseSpMatSetValues(mat->matDescr,csrmat->values->data().get());CHKERRCUSPARSE(stat); 2095afb2bd1cSJunchao Zhang stat = cusparseDnMatSetValues(mmdata->matBDescr,(void*)barray);CHKERRCUSPARSE(stat); 2096afb2bd1cSJunchao Zhang stat = cusparseDnMatSetValues(mmdata->matCDescr,(void*)carray);CHKERRCUSPARSE(stat); 2097afb2bd1cSJunchao Zhang } 2098afb2bd1cSJunchao Zhang 2099afb2bd1cSJunchao Zhang /* do cusparseSpMM, which supports transpose on B */ 2100afb2bd1cSJunchao Zhang stat = cusparseSpMM(cusp->handle,opA,opB,mat->alpha_one, 2101afb2bd1cSJunchao Zhang mat->matDescr,mmdata->matBDescr,mat->beta_zero, 2102afb2bd1cSJunchao Zhang mmdata->matCDescr,cusparse_scalartype, 2103fcdce8c4SStefano Zampini cusp->spmmAlg,mmdata->mmBuffer);CHKERRCUSPARSE(stat); 2104afb2bd1cSJunchao Zhang #else 2105afb2bd1cSJunchao Zhang PetscInt k; 2106afb2bd1cSJunchao Zhang /* cusparseXcsrmm does not support transpose on B */ 2107ccdfe979SStefano Zampini if (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) { 2108ccdfe979SStefano Zampini cublasHandle_t cublasv2handle; 2109ccdfe979SStefano Zampini cublasStatus_t cerr; 2110ccdfe979SStefano Zampini 2111ccdfe979SStefano Zampini ierr = PetscCUBLASGetHandle(&cublasv2handle);CHKERRQ(ierr); 2112ccdfe979SStefano Zampini cerr = cublasXgeam(cublasv2handle,CUBLAS_OP_T,CUBLAS_OP_T, 2113ccdfe979SStefano Zampini B->cmap->n,B->rmap->n, 2114ccdfe979SStefano Zampini &PETSC_CUSPARSE_ONE ,barray,blda, 2115ccdfe979SStefano Zampini &PETSC_CUSPARSE_ZERO,barray,blda, 2116ccdfe979SStefano Zampini mmdata->Bt,B->cmap->n);CHKERRCUBLAS(cerr); 2117ccdfe979SStefano Zampini blda = B->cmap->n; 2118afb2bd1cSJunchao Zhang k = B->cmap->n; 2119afb2bd1cSJunchao Zhang } else { 2120afb2bd1cSJunchao Zhang k = B->rmap->n; 2121ccdfe979SStefano Zampini } 2122ccdfe979SStefano Zampini 2123afb2bd1cSJunchao Zhang /* perform the MatMat operation, op(A) is m x k, op(B) is k x n */ 2124ccdfe979SStefano Zampini stat = cusparse_csr_spmm(cusp->handle,opA,m,n,k, 2125afb2bd1cSJunchao Zhang csrmat->num_entries,mat->alpha_one,mat->descr, 2126ccdfe979SStefano Zampini csrmat->values->data().get(), 2127ccdfe979SStefano Zampini csrmat->row_offsets->data().get(), 2128ccdfe979SStefano Zampini csrmat->column_indices->data().get(), 2129ccdfe979SStefano Zampini mmdata->Bt ? mmdata->Bt : barray,blda,mat->beta_zero, 2130ccdfe979SStefano Zampini carray,clda);CHKERRCUSPARSE(stat); 2131afb2bd1cSJunchao Zhang #endif 2132c8378d12SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2133c8378d12SStefano Zampini ierr = PetscLogGpuFlops(n*2.0*csrmat->num_entries);CHKERRQ(ierr); 2134ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayRead(B,&barray);CHKERRQ(ierr); 2135ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt) { 2136ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayWrite(mmdata->X,&carray);CHKERRQ(ierr); 2137ccdfe979SStefano Zampini ierr = MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Private(B,mmdata->X,C,PETSC_FALSE,PETSC_FALSE);CHKERRQ(ierr); 2138ccdfe979SStefano Zampini } else if (product->type == MATPRODUCT_PtAP) { 2139ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayWrite(mmdata->X,&carray);CHKERRQ(ierr); 2140ccdfe979SStefano Zampini ierr = MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Private(B,mmdata->X,C,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr); 2141ccdfe979SStefano Zampini } else { 2142ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayWrite(C,&carray);CHKERRQ(ierr); 2143ccdfe979SStefano Zampini } 2144ccdfe979SStefano Zampini if (mmdata->cisdense) { 2145ccdfe979SStefano Zampini ierr = MatConvert(C,MATSEQDENSE,MAT_INPLACE_MATRIX,&C);CHKERRQ(ierr); 2146ccdfe979SStefano Zampini } 2147ccdfe979SStefano Zampini if (!biscuda) { 2148ccdfe979SStefano Zampini ierr = MatConvert(B,MATSEQDENSE,MAT_INPLACE_MATRIX,&B);CHKERRQ(ierr); 2149ccdfe979SStefano Zampini } 2150ccdfe979SStefano Zampini PetscFunctionReturn(0); 2151ccdfe979SStefano Zampini } 2152ccdfe979SStefano Zampini 2153ccdfe979SStefano Zampini static PetscErrorCode MatProductSymbolic_SeqAIJCUSPARSE_SeqDENSECUDA(Mat C) 2154ccdfe979SStefano Zampini { 2155ccdfe979SStefano Zampini Mat_Product *product = C->product; 2156ccdfe979SStefano Zampini Mat A,B; 2157ccdfe979SStefano Zampini PetscInt m,n; 2158ccdfe979SStefano Zampini PetscBool cisdense,flg; 2159ccdfe979SStefano Zampini PetscErrorCode ierr; 2160ccdfe979SStefano Zampini MatMatCusparse *mmdata; 2161ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSE *cusp; 2162ccdfe979SStefano Zampini 2163ccdfe979SStefano Zampini PetscFunctionBegin; 2164ccdfe979SStefano Zampini MatCheckProduct(C,1); 2165e8d2b73aSMark Adams if (C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data not empty"); 2166ccdfe979SStefano Zampini A = product->A; 2167ccdfe979SStefano Zampini B = product->B; 2168ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2169e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 2170ccdfe979SStefano Zampini cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2171e8d2b73aSMark Adams if (cusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2172ccdfe979SStefano Zampini switch (product->type) { 2173ccdfe979SStefano Zampini case MATPRODUCT_AB: 2174ccdfe979SStefano Zampini m = A->rmap->n; 2175ccdfe979SStefano Zampini n = B->cmap->n; 2176ccdfe979SStefano Zampini break; 2177ccdfe979SStefano Zampini case MATPRODUCT_AtB: 2178ccdfe979SStefano Zampini m = A->cmap->n; 2179ccdfe979SStefano Zampini n = B->cmap->n; 2180ccdfe979SStefano Zampini break; 2181ccdfe979SStefano Zampini case MATPRODUCT_ABt: 2182ccdfe979SStefano Zampini m = A->rmap->n; 2183ccdfe979SStefano Zampini n = B->rmap->n; 2184ccdfe979SStefano Zampini break; 2185ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 2186ccdfe979SStefano Zampini m = B->cmap->n; 2187ccdfe979SStefano Zampini n = B->cmap->n; 2188ccdfe979SStefano Zampini break; 2189ccdfe979SStefano Zampini case MATPRODUCT_RARt: 2190ccdfe979SStefano Zampini m = B->rmap->n; 2191ccdfe979SStefano Zampini n = B->rmap->n; 2192ccdfe979SStefano Zampini break; 2193ccdfe979SStefano Zampini default: 2194e8d2b73aSMark Adams SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 2195ccdfe979SStefano Zampini } 2196ccdfe979SStefano Zampini ierr = MatSetSizes(C,m,n,m,n);CHKERRQ(ierr); 2197ccdfe979SStefano Zampini /* if C is of type MATSEQDENSE (CPU), perform the operation on the GPU and then copy on the CPU */ 2198ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)C,MATSEQDENSE,&cisdense);CHKERRQ(ierr); 2199ccdfe979SStefano Zampini ierr = MatSetType(C,MATSEQDENSECUDA);CHKERRQ(ierr); 2200ccdfe979SStefano Zampini 2201ccdfe979SStefano Zampini /* product data */ 2202ccdfe979SStefano Zampini ierr = PetscNew(&mmdata);CHKERRQ(ierr); 2203ccdfe979SStefano Zampini mmdata->cisdense = cisdense; 2204afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_LT(11,0,0) 2205afb2bd1cSJunchao Zhang /* cusparseXcsrmm does not support transpose on B, so we allocate buffer to store B^T */ 2206ccdfe979SStefano Zampini if (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) { 2207afb2bd1cSJunchao Zhang cudaError_t cerr = cudaMalloc((void**)&mmdata->Bt,(size_t)B->rmap->n*(size_t)B->cmap->n*sizeof(PetscScalar));CHKERRCUDA(cerr); 2208ccdfe979SStefano Zampini } 2209afb2bd1cSJunchao Zhang #endif 2210ccdfe979SStefano Zampini /* for these products we need intermediate storage */ 2211ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt || product->type == MATPRODUCT_PtAP) { 2212ccdfe979SStefano Zampini ierr = MatCreate(PetscObjectComm((PetscObject)C),&mmdata->X);CHKERRQ(ierr); 2213ccdfe979SStefano Zampini ierr = MatSetType(mmdata->X,MATSEQDENSECUDA);CHKERRQ(ierr); 2214ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt) { /* do not preallocate, since the first call to MatDenseCUDAGetArray will preallocate on the GPU for us */ 2215ccdfe979SStefano Zampini ierr = MatSetSizes(mmdata->X,A->rmap->n,B->rmap->n,A->rmap->n,B->rmap->n);CHKERRQ(ierr); 2216ccdfe979SStefano Zampini } else { 2217ccdfe979SStefano Zampini ierr = MatSetSizes(mmdata->X,A->rmap->n,B->cmap->n,A->rmap->n,B->cmap->n);CHKERRQ(ierr); 2218ccdfe979SStefano Zampini } 2219ccdfe979SStefano Zampini } 2220ccdfe979SStefano Zampini C->product->data = mmdata; 2221ccdfe979SStefano Zampini C->product->destroy = MatDestroy_MatMatCusparse; 2222ccdfe979SStefano Zampini 2223ccdfe979SStefano Zampini C->ops->productnumeric = MatProductNumeric_SeqAIJCUSPARSE_SeqDENSECUDA; 2224ccdfe979SStefano Zampini PetscFunctionReturn(0); 2225ccdfe979SStefano Zampini } 2226ccdfe979SStefano Zampini 2227fcdce8c4SStefano Zampini static PetscErrorCode MatProductNumeric_SeqAIJCUSPARSE_SeqAIJCUSPARSE(Mat C) 2228ccdfe979SStefano Zampini { 2229ccdfe979SStefano Zampini Mat_Product *product = C->product; 2230fcdce8c4SStefano Zampini Mat A,B; 2231fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp,*Bcusp,*Ccusp; 2232fcdce8c4SStefano Zampini Mat_SeqAIJ *c = (Mat_SeqAIJ*)C->data; 2233fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Amat,*Bmat,*Cmat; 2234fcdce8c4SStefano Zampini CsrMatrix *Acsr,*Bcsr,*Ccsr; 2235fcdce8c4SStefano Zampini PetscBool flg; 2236ccdfe979SStefano Zampini PetscErrorCode ierr; 2237fcdce8c4SStefano Zampini cusparseStatus_t stat; 2238fcdce8c4SStefano Zampini cudaError_t cerr; 2239fcdce8c4SStefano Zampini MatProductType ptype; 2240fcdce8c4SStefano Zampini MatMatCusparse *mmdata; 2241fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2242fcdce8c4SStefano Zampini cusparseSpMatDescr_t BmatSpDescr; 2243fcdce8c4SStefano Zampini #endif 2244ccdfe979SStefano Zampini 2245ccdfe979SStefano Zampini PetscFunctionBegin; 2246ccdfe979SStefano Zampini MatCheckProduct(C,1); 2247e8d2b73aSMark Adams if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data empty"); 2248fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)C,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2249e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for C of type %s",((PetscObject)C)->type_name); 2250fcdce8c4SStefano Zampini mmdata = (MatMatCusparse*)C->product->data; 2251fcdce8c4SStefano Zampini A = product->A; 2252fcdce8c4SStefano Zampini B = product->B; 2253fcdce8c4SStefano Zampini if (mmdata->reusesym) { /* this happens when api_user is true, meaning that the matrix values have been already computed in the MatProductSymbolic phase */ 2254fcdce8c4SStefano Zampini mmdata->reusesym = PETSC_FALSE; 2255fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)C->spptr; 2256e8d2b73aSMark Adams if (Ccusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2257fcdce8c4SStefano Zampini Cmat = Ccusp->mat; 2258e8d2b73aSMark Adams if (!Cmat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C mult struct for product type %s",MatProductTypes[C->product->type]); 2259fcdce8c4SStefano Zampini Ccsr = (CsrMatrix*)Cmat->mat; 2260e8d2b73aSMark Adams if (!Ccsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C CSR struct"); 2261fcdce8c4SStefano Zampini goto finalize; 2262fcdce8c4SStefano Zampini } 2263fcdce8c4SStefano Zampini if (!c->nz) goto finalize; 2264fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2265e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 2266fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)B,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2267e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for B of type %s",((PetscObject)B)->type_name); 2268fcdce8c4SStefano Zampini if (A->boundtocpu) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_ARG_WRONG,"Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 2269fcdce8c4SStefano Zampini if (B->boundtocpu) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_ARG_WRONG,"Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 2270fcdce8c4SStefano Zampini Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2271fcdce8c4SStefano Zampini Bcusp = (Mat_SeqAIJCUSPARSE*)B->spptr; 2272fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)C->spptr; 2273e8d2b73aSMark Adams if (Acusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2274e8d2b73aSMark Adams if (Bcusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2275e8d2b73aSMark Adams if (Ccusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2276fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 2277fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 2278fcdce8c4SStefano Zampini 2279fcdce8c4SStefano Zampini ptype = product->type; 2280fcdce8c4SStefano Zampini if (A->symmetric && ptype == MATPRODUCT_AtB) ptype = MATPRODUCT_AB; 2281fcdce8c4SStefano Zampini if (B->symmetric && ptype == MATPRODUCT_ABt) ptype = MATPRODUCT_AB; 2282fcdce8c4SStefano Zampini switch (ptype) { 2283fcdce8c4SStefano Zampini case MATPRODUCT_AB: 2284fcdce8c4SStefano Zampini Amat = Acusp->mat; 2285fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2286fcdce8c4SStefano Zampini break; 2287fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 2288fcdce8c4SStefano Zampini Amat = Acusp->matTranspose; 2289fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2290fcdce8c4SStefano Zampini break; 2291fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 2292fcdce8c4SStefano Zampini Amat = Acusp->mat; 2293fcdce8c4SStefano Zampini Bmat = Bcusp->matTranspose; 2294fcdce8c4SStefano Zampini break; 2295fcdce8c4SStefano Zampini default: 2296e8d2b73aSMark Adams SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 2297fcdce8c4SStefano Zampini } 2298fcdce8c4SStefano Zampini Cmat = Ccusp->mat; 2299e8d2b73aSMark Adams if (!Amat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A mult struct for product type %s",MatProductTypes[ptype]); 2300e8d2b73aSMark Adams if (!Bmat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B mult struct for product type %s",MatProductTypes[ptype]); 2301e8d2b73aSMark Adams if (!Cmat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C mult struct for product type %s",MatProductTypes[ptype]); 2302fcdce8c4SStefano Zampini Acsr = (CsrMatrix*)Amat->mat; 2303fcdce8c4SStefano Zampini Bcsr = mmdata->Bcsr ? mmdata->Bcsr : (CsrMatrix*)Bmat->mat; /* B may be in compressed row storage */ 2304fcdce8c4SStefano Zampini Ccsr = (CsrMatrix*)Cmat->mat; 2305e8d2b73aSMark Adams if (!Acsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A CSR struct"); 2306e8d2b73aSMark Adams if (!Bcsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B CSR struct"); 2307e8d2b73aSMark Adams if (!Ccsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing C CSR struct"); 2308fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2309fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2310fcdce8c4SStefano Zampini BmatSpDescr = mmdata->Bcsr ? mmdata->matSpBDescr : Bmat->matDescr; /* B may be in compressed row storage */ 2311fcdce8c4SStefano Zampini stat = cusparseSpGEMM_compute(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2312fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2313fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2314fcdce8c4SStefano Zampini mmdata->spgemmDesc, &mmdata->mmBufferSize, mmdata->mmBuffer);CHKERRCUSPARSE(stat); 2315fcdce8c4SStefano Zampini stat = cusparseSpGEMM_copy(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2316fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2317fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc);CHKERRCUSPARSE(stat); 2318fcdce8c4SStefano Zampini #else 2319fcdce8c4SStefano Zampini stat = cusparse_csr_spgemm(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2320fcdce8c4SStefano Zampini Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, 2321fcdce8c4SStefano Zampini Amat->descr, Acsr->num_entries, Acsr->values->data().get(), Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), 2322fcdce8c4SStefano Zampini Bmat->descr, Bcsr->num_entries, Bcsr->values->data().get(), Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2323fcdce8c4SStefano Zampini Cmat->descr, Ccsr->values->data().get(), Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get());CHKERRCUSPARSE(stat); 2324fcdce8c4SStefano Zampini #endif 2325fcdce8c4SStefano Zampini ierr = PetscLogGpuFlops(mmdata->flops);CHKERRQ(ierr); 2326fcdce8c4SStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 2327fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2328fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_GPU; 2329fcdce8c4SStefano Zampini finalize: 2330fcdce8c4SStefano Zampini /* shorter version of MatAssemblyEnd_SeqAIJ */ 2331fcdce8c4SStefano Zampini ierr = PetscInfo3(C,"Matrix size: %D X %D; storage space: 0 unneeded,%D used\n",C->rmap->n,C->cmap->n,c->nz);CHKERRQ(ierr); 2332fcdce8c4SStefano Zampini ierr = PetscInfo(C,"Number of mallocs during MatSetValues() is 0\n");CHKERRQ(ierr); 2333fcdce8c4SStefano Zampini ierr = PetscInfo1(C,"Maximum nonzeros in any row is %D\n",c->rmax);CHKERRQ(ierr); 2334fcdce8c4SStefano Zampini c->reallocs = 0; 2335fcdce8c4SStefano Zampini C->info.mallocs += 0; 2336fcdce8c4SStefano Zampini C->info.nz_unneeded = 0; 2337fcdce8c4SStefano Zampini C->assembled = C->was_assembled = PETSC_TRUE; 2338fcdce8c4SStefano Zampini C->num_ass++; 2339ccdfe979SStefano Zampini PetscFunctionReturn(0); 2340ccdfe979SStefano Zampini } 2341fcdce8c4SStefano Zampini 2342fcdce8c4SStefano Zampini static PetscErrorCode MatProductSymbolic_SeqAIJCUSPARSE_SeqAIJCUSPARSE(Mat C) 2343fcdce8c4SStefano Zampini { 2344fcdce8c4SStefano Zampini Mat_Product *product = C->product; 2345fcdce8c4SStefano Zampini Mat A,B; 2346fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp,*Bcusp,*Ccusp; 2347fcdce8c4SStefano Zampini Mat_SeqAIJ *a,*b,*c; 2348fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Amat,*Bmat,*Cmat; 2349fcdce8c4SStefano Zampini CsrMatrix *Acsr,*Bcsr,*Ccsr; 2350fcdce8c4SStefano Zampini PetscInt i,j,m,n,k; 2351fcdce8c4SStefano Zampini PetscBool flg; 2352fcdce8c4SStefano Zampini PetscErrorCode ierr; 2353fcdce8c4SStefano Zampini cusparseStatus_t stat; 2354fcdce8c4SStefano Zampini cudaError_t cerr; 2355fcdce8c4SStefano Zampini MatProductType ptype; 2356fcdce8c4SStefano Zampini MatMatCusparse *mmdata; 2357fcdce8c4SStefano Zampini PetscLogDouble flops; 2358fcdce8c4SStefano Zampini PetscBool biscompressed,ciscompressed; 2359fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2360fcdce8c4SStefano Zampini int64_t C_num_rows1, C_num_cols1, C_nnz1; 2361fcdce8c4SStefano Zampini size_t bufSize2; 2362fcdce8c4SStefano Zampini cusparseSpMatDescr_t BmatSpDescr; 2363fcdce8c4SStefano Zampini #else 2364fcdce8c4SStefano Zampini int cnz; 2365fcdce8c4SStefano Zampini #endif 2366fcdce8c4SStefano Zampini 2367fcdce8c4SStefano Zampini PetscFunctionBegin; 2368fcdce8c4SStefano Zampini MatCheckProduct(C,1); 2369e8d2b73aSMark Adams if (C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Product data not empty"); 2370fcdce8c4SStefano Zampini A = product->A; 2371fcdce8c4SStefano Zampini B = product->B; 2372fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2373e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for type %s",((PetscObject)A)->type_name); 2374fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)B,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2375e8d2b73aSMark Adams if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Not for B of type %s",((PetscObject)B)->type_name); 2376fcdce8c4SStefano Zampini a = (Mat_SeqAIJ*)A->data; 2377fcdce8c4SStefano Zampini b = (Mat_SeqAIJ*)B->data; 2378fcdce8c4SStefano Zampini Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2379fcdce8c4SStefano Zampini Bcusp = (Mat_SeqAIJCUSPARSE*)B->spptr; 2380e8d2b73aSMark Adams if (Acusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2381e8d2b73aSMark Adams if (Bcusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Only for MAT_CUSPARSE_CSR format"); 2382fcdce8c4SStefano Zampini 2383fcdce8c4SStefano Zampini /* product data */ 2384fcdce8c4SStefano Zampini ierr = PetscNew(&mmdata);CHKERRQ(ierr); 2385fcdce8c4SStefano Zampini C->product->data = mmdata; 2386fcdce8c4SStefano Zampini C->product->destroy = MatDestroy_MatMatCusparse; 2387fcdce8c4SStefano Zampini 2388fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 2389fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 2390fcdce8c4SStefano Zampini ptype = product->type; 2391fcdce8c4SStefano Zampini if (A->symmetric && ptype == MATPRODUCT_AtB) ptype = MATPRODUCT_AB; 2392fcdce8c4SStefano Zampini if (B->symmetric && ptype == MATPRODUCT_ABt) ptype = MATPRODUCT_AB; 2393fcdce8c4SStefano Zampini biscompressed = PETSC_FALSE; 2394fcdce8c4SStefano Zampini ciscompressed = PETSC_FALSE; 2395fcdce8c4SStefano Zampini switch (ptype) { 2396fcdce8c4SStefano Zampini case MATPRODUCT_AB: 2397fcdce8c4SStefano Zampini m = A->rmap->n; 2398fcdce8c4SStefano Zampini n = B->cmap->n; 2399fcdce8c4SStefano Zampini k = A->cmap->n; 2400fcdce8c4SStefano Zampini Amat = Acusp->mat; 2401fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2402fcdce8c4SStefano Zampini if (a->compressedrow.use) ciscompressed = PETSC_TRUE; 2403fcdce8c4SStefano Zampini if (b->compressedrow.use) biscompressed = PETSC_TRUE; 2404fcdce8c4SStefano Zampini break; 2405fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 2406fcdce8c4SStefano Zampini m = A->cmap->n; 2407fcdce8c4SStefano Zampini n = B->cmap->n; 2408fcdce8c4SStefano Zampini k = A->rmap->n; 24091a2c6b5cSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTransposeForMult(A);CHKERRQ(ierr); 2410fcdce8c4SStefano Zampini Amat = Acusp->matTranspose; 2411fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2412fcdce8c4SStefano Zampini if (b->compressedrow.use) biscompressed = PETSC_TRUE; 2413fcdce8c4SStefano Zampini break; 2414fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 2415fcdce8c4SStefano Zampini m = A->rmap->n; 2416fcdce8c4SStefano Zampini n = B->rmap->n; 2417fcdce8c4SStefano Zampini k = A->cmap->n; 24181a2c6b5cSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTransposeForMult(B);CHKERRQ(ierr); 2419fcdce8c4SStefano Zampini Amat = Acusp->mat; 2420fcdce8c4SStefano Zampini Bmat = Bcusp->matTranspose; 2421fcdce8c4SStefano Zampini if (a->compressedrow.use) ciscompressed = PETSC_TRUE; 2422fcdce8c4SStefano Zampini break; 2423fcdce8c4SStefano Zampini default: 2424e8d2b73aSMark Adams SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Unsupported product type %s",MatProductTypes[product->type]); 2425fcdce8c4SStefano Zampini } 2426fcdce8c4SStefano Zampini 2427fcdce8c4SStefano Zampini /* create cusparse matrix */ 2428fcdce8c4SStefano Zampini ierr = MatSetSizes(C,m,n,m,n);CHKERRQ(ierr); 2429fcdce8c4SStefano Zampini ierr = MatSetType(C,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 2430fcdce8c4SStefano Zampini c = (Mat_SeqAIJ*)C->data; 2431fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)C->spptr; 2432fcdce8c4SStefano Zampini Cmat = new Mat_SeqAIJCUSPARSEMultStruct; 2433fcdce8c4SStefano Zampini Ccsr = new CsrMatrix; 2434fcdce8c4SStefano Zampini 2435fcdce8c4SStefano Zampini c->compressedrow.use = ciscompressed; 2436fcdce8c4SStefano Zampini if (c->compressedrow.use) { /* if a is in compressed row, than c will be in compressed row format */ 2437fcdce8c4SStefano Zampini c->compressedrow.nrows = a->compressedrow.nrows; 2438fcdce8c4SStefano Zampini ierr = PetscMalloc2(c->compressedrow.nrows+1,&c->compressedrow.i,c->compressedrow.nrows,&c->compressedrow.rindex);CHKERRQ(ierr); 2439fcdce8c4SStefano Zampini ierr = PetscArraycpy(c->compressedrow.rindex,a->compressedrow.rindex,c->compressedrow.nrows);CHKERRQ(ierr); 2440fcdce8c4SStefano Zampini Ccusp->workVector = new THRUSTARRAY(c->compressedrow.nrows); 2441fcdce8c4SStefano Zampini Cmat->cprowIndices = new THRUSTINTARRAY(c->compressedrow.nrows); 2442fcdce8c4SStefano Zampini Cmat->cprowIndices->assign(c->compressedrow.rindex,c->compressedrow.rindex + c->compressedrow.nrows); 2443fcdce8c4SStefano Zampini } else { 2444fcdce8c4SStefano Zampini c->compressedrow.nrows = 0; 2445fcdce8c4SStefano Zampini c->compressedrow.i = NULL; 2446fcdce8c4SStefano Zampini c->compressedrow.rindex = NULL; 2447fcdce8c4SStefano Zampini Ccusp->workVector = NULL; 2448fcdce8c4SStefano Zampini Cmat->cprowIndices = NULL; 2449fcdce8c4SStefano Zampini } 2450fcdce8c4SStefano Zampini Ccusp->nrows = ciscompressed ? c->compressedrow.nrows : m; 2451fcdce8c4SStefano Zampini Ccusp->mat = Cmat; 2452fcdce8c4SStefano Zampini Ccusp->mat->mat = Ccsr; 2453fcdce8c4SStefano Zampini Ccsr->num_rows = Ccusp->nrows; 2454fcdce8c4SStefano Zampini Ccsr->num_cols = n; 2455fcdce8c4SStefano Zampini Ccsr->row_offsets = new THRUSTINTARRAY32(Ccusp->nrows+1); 2456fcdce8c4SStefano Zampini stat = cusparseCreateMatDescr(&Cmat->descr);CHKERRCUSPARSE(stat); 2457fcdce8c4SStefano Zampini stat = cusparseSetMatIndexBase(Cmat->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 2458fcdce8c4SStefano Zampini stat = cusparseSetMatType(Cmat->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 2459fcdce8c4SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->alpha_one),sizeof(PetscScalar));CHKERRCUDA(cerr); 2460fcdce8c4SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_zero),sizeof(PetscScalar));CHKERRCUDA(cerr); 2461fcdce8c4SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_one), sizeof(PetscScalar));CHKERRCUDA(cerr); 2462fcdce8c4SStefano Zampini cerr = cudaMemcpy(Cmat->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 2463fcdce8c4SStefano Zampini cerr = cudaMemcpy(Cmat->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 2464fcdce8c4SStefano Zampini cerr = cudaMemcpy(Cmat->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 2465fcdce8c4SStefano Zampini if (!Ccsr->num_rows || !Ccsr->num_cols || !a->nz || !b->nz) { /* cusparse raise errors in different calls when matrices have zero rows/columns! */ 2466fcdce8c4SStefano Zampini thrust::fill(thrust::device,Ccsr->row_offsets->begin(),Ccsr->row_offsets->end(),0); 2467fcdce8c4SStefano Zampini c->nz = 0; 2468fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 2469fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 2470fcdce8c4SStefano Zampini goto finalizesym; 2471fcdce8c4SStefano Zampini } 2472fcdce8c4SStefano Zampini 2473e8d2b73aSMark Adams if (!Amat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A mult struct for product type %s",MatProductTypes[ptype]); 2474e8d2b73aSMark Adams if (!Bmat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B mult struct for product type %s",MatProductTypes[ptype]); 2475fcdce8c4SStefano Zampini Acsr = (CsrMatrix*)Amat->mat; 2476fcdce8c4SStefano Zampini if (!biscompressed) { 2477fcdce8c4SStefano Zampini Bcsr = (CsrMatrix*)Bmat->mat; 2478fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2479fcdce8c4SStefano Zampini BmatSpDescr = Bmat->matDescr; 2480fcdce8c4SStefano Zampini #endif 2481fcdce8c4SStefano Zampini } else { /* we need to use row offsets for the full matrix */ 2482fcdce8c4SStefano Zampini CsrMatrix *cBcsr = (CsrMatrix*)Bmat->mat; 2483fcdce8c4SStefano Zampini Bcsr = new CsrMatrix; 2484fcdce8c4SStefano Zampini Bcsr->num_rows = B->rmap->n; 2485fcdce8c4SStefano Zampini Bcsr->num_cols = cBcsr->num_cols; 2486fcdce8c4SStefano Zampini Bcsr->num_entries = cBcsr->num_entries; 2487fcdce8c4SStefano Zampini Bcsr->column_indices = cBcsr->column_indices; 2488fcdce8c4SStefano Zampini Bcsr->values = cBcsr->values; 2489fcdce8c4SStefano Zampini if (!Bcusp->rowoffsets_gpu) { 2490fcdce8c4SStefano Zampini Bcusp->rowoffsets_gpu = new THRUSTINTARRAY32(B->rmap->n + 1); 2491fcdce8c4SStefano Zampini Bcusp->rowoffsets_gpu->assign(b->i,b->i + B->rmap->n + 1); 2492fcdce8c4SStefano Zampini ierr = PetscLogCpuToGpu((B->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 2493fcdce8c4SStefano Zampini } 2494fcdce8c4SStefano Zampini Bcsr->row_offsets = Bcusp->rowoffsets_gpu; 2495fcdce8c4SStefano Zampini mmdata->Bcsr = Bcsr; 2496fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2497fcdce8c4SStefano Zampini if (Bcsr->num_rows && Bcsr->num_cols) { 2498fcdce8c4SStefano Zampini stat = cusparseCreateCsr(&mmdata->matSpBDescr, Bcsr->num_rows, Bcsr->num_cols, Bcsr->num_entries, 2499fcdce8c4SStefano Zampini Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2500fcdce8c4SStefano Zampini Bcsr->values->data().get(), 2501fcdce8c4SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 2502fcdce8c4SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 2503fcdce8c4SStefano Zampini } 2504fcdce8c4SStefano Zampini BmatSpDescr = mmdata->matSpBDescr; 2505fcdce8c4SStefano Zampini #endif 2506fcdce8c4SStefano Zampini } 2507e8d2b73aSMark Adams if (!Acsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing A CSR struct"); 2508e8d2b73aSMark Adams if (!Bcsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_GPU,"Missing B CSR struct"); 2509fcdce8c4SStefano Zampini /* precompute flops count */ 2510fcdce8c4SStefano Zampini if (ptype == MATPRODUCT_AB) { 2511fcdce8c4SStefano Zampini for (i=0, flops = 0; i<A->rmap->n; i++) { 2512fcdce8c4SStefano Zampini const PetscInt st = a->i[i]; 2513fcdce8c4SStefano Zampini const PetscInt en = a->i[i+1]; 2514fcdce8c4SStefano Zampini for (j=st; j<en; j++) { 2515fcdce8c4SStefano Zampini const PetscInt brow = a->j[j]; 2516fcdce8c4SStefano Zampini flops += 2.*(b->i[brow+1] - b->i[brow]); 2517fcdce8c4SStefano Zampini } 2518fcdce8c4SStefano Zampini } 2519fcdce8c4SStefano Zampini } else if (ptype == MATPRODUCT_AtB) { 2520fcdce8c4SStefano Zampini for (i=0, flops = 0; i<A->rmap->n; i++) { 2521fcdce8c4SStefano Zampini const PetscInt anzi = a->i[i+1] - a->i[i]; 2522fcdce8c4SStefano Zampini const PetscInt bnzi = b->i[i+1] - b->i[i]; 2523fcdce8c4SStefano Zampini flops += (2.*anzi)*bnzi; 2524fcdce8c4SStefano Zampini } 2525fcdce8c4SStefano Zampini } else { /* TODO */ 2526fcdce8c4SStefano Zampini flops = 0.; 2527fcdce8c4SStefano Zampini } 2528fcdce8c4SStefano Zampini 2529fcdce8c4SStefano Zampini mmdata->flops = flops; 2530fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2531fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2532fcdce8c4SStefano Zampini stat = cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 2533fcdce8c4SStefano Zampini stat = cusparseCreateCsr(&Cmat->matDescr, Ccsr->num_rows, Ccsr->num_cols, 0, 2534fcdce8c4SStefano Zampini NULL, NULL, NULL, 2535fcdce8c4SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 2536fcdce8c4SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 2537fcdce8c4SStefano Zampini stat = cusparseSpGEMM_createDescr(&mmdata->spgemmDesc);CHKERRCUSPARSE(stat); 2538fcdce8c4SStefano Zampini /* ask bufferSize bytes for external memory */ 2539fcdce8c4SStefano Zampini stat = cusparseSpGEMM_workEstimation(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2540fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2541fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2542fcdce8c4SStefano Zampini mmdata->spgemmDesc, &bufSize2, NULL);CHKERRCUSPARSE(stat); 2543bfcc3627SStefano Zampini cerr = cudaMalloc((void**) &mmdata->mmBuffer2, bufSize2);CHKERRCUDA(cerr); 2544fcdce8c4SStefano Zampini /* inspect the matrices A and B to understand the memory requirement for the next step */ 2545fcdce8c4SStefano Zampini stat = cusparseSpGEMM_workEstimation(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2546fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2547fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2548fcdce8c4SStefano Zampini mmdata->spgemmDesc, &bufSize2, mmdata->mmBuffer2);CHKERRCUSPARSE(stat); 2549fcdce8c4SStefano Zampini /* ask bufferSize again bytes for external memory */ 2550fcdce8c4SStefano Zampini stat = cusparseSpGEMM_compute(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2551fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2552fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2553fcdce8c4SStefano Zampini mmdata->spgemmDesc, &mmdata->mmBufferSize, NULL);CHKERRCUSPARSE(stat); 2554fcdce8c4SStefano Zampini /* The CUSPARSE documentation is not clear, nor the API 2555fcdce8c4SStefano Zampini We need both buffers to perform the operations properly! 2556fcdce8c4SStefano Zampini mmdata->mmBuffer2 does not appear anywhere in the compute/copy API 2557fcdce8c4SStefano Zampini it only appears for the workEstimation stuff, but it seems it is needed in compute, so probably the address 2558fcdce8c4SStefano Zampini is stored in the descriptor! What a messy API... */ 2559bfcc3627SStefano Zampini cerr = cudaMalloc((void**) &mmdata->mmBuffer, mmdata->mmBufferSize);CHKERRCUDA(cerr); 2560fcdce8c4SStefano Zampini /* compute the intermediate product of A * B */ 2561fcdce8c4SStefano Zampini stat = cusparseSpGEMM_compute(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2562fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2563fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2564fcdce8c4SStefano Zampini mmdata->spgemmDesc, &mmdata->mmBufferSize, mmdata->mmBuffer);CHKERRCUSPARSE(stat); 2565fcdce8c4SStefano Zampini /* get matrix C non-zero entries C_nnz1 */ 2566fcdce8c4SStefano Zampini stat = cusparseSpMatGetSize(Cmat->matDescr, &C_num_rows1, &C_num_cols1, &C_nnz1);CHKERRCUSPARSE(stat); 2567fcdce8c4SStefano Zampini c->nz = (PetscInt) C_nnz1; 256800702c57SStefano Zampini ierr = PetscInfo9(C,"Buffer sizes for type %s, result %D x %D (k %D, nzA %D, nzB %D, nzC %D) are: %ldKB %ldKB\n",MatProductTypes[ptype],m,n,k,a->nz,b->nz,c->nz,bufSize2/1024,mmdata->mmBufferSize/1024);CHKERRQ(ierr); 2569fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 2570fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2571fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 2572fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2573fcdce8c4SStefano Zampini stat = cusparseCsrSetPointers(Cmat->matDescr, Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get(), 2574fcdce8c4SStefano Zampini Ccsr->values->data().get());CHKERRCUSPARSE(stat); 2575fcdce8c4SStefano Zampini stat = cusparseSpGEMM_copy(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2576fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2577fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc);CHKERRCUSPARSE(stat); 2578fcdce8c4SStefano Zampini #else 2579fcdce8c4SStefano Zampini stat = cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_HOST);CHKERRCUSPARSE(stat); 2580fcdce8c4SStefano Zampini stat = cusparseXcsrgemmNnz(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2581fcdce8c4SStefano Zampini Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, 2582fcdce8c4SStefano Zampini Amat->descr, Acsr->num_entries, Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), 2583fcdce8c4SStefano Zampini Bmat->descr, Bcsr->num_entries, Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2584fcdce8c4SStefano Zampini Cmat->descr, Ccsr->row_offsets->data().get(), &cnz);CHKERRCUSPARSE(stat); 2585fcdce8c4SStefano Zampini c->nz = cnz; 2586fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 2587fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2588fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 2589fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2590fcdce8c4SStefano Zampini 2591fcdce8c4SStefano Zampini stat = cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 2592fcdce8c4SStefano Zampini /* with the old gemm interface (removed from 11.0 on) we cannot compute the symbolic factorization only. 2593fcdce8c4SStefano Zampini I have tried using the gemm2 interface (alpha * A * B + beta * D), which allows to do symbolic by passing NULL for values, but it seems quite buggy when 2594fcdce8c4SStefano Zampini D is NULL, despite the fact that CUSPARSE documentation claims it is supported! */ 2595fcdce8c4SStefano Zampini stat = cusparse_csr_spgemm(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2596fcdce8c4SStefano Zampini Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, 2597fcdce8c4SStefano Zampini Amat->descr, Acsr->num_entries, Acsr->values->data().get(), Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), 2598fcdce8c4SStefano Zampini Bmat->descr, Bcsr->num_entries, Bcsr->values->data().get(), Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2599fcdce8c4SStefano Zampini Cmat->descr, Ccsr->values->data().get(), Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get());CHKERRCUSPARSE(stat); 2600fcdce8c4SStefano Zampini #endif 2601fcdce8c4SStefano Zampini ierr = PetscLogGpuFlops(mmdata->flops);CHKERRQ(ierr); 2602fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2603fcdce8c4SStefano Zampini finalizesym: 2604fcdce8c4SStefano Zampini c->singlemalloc = PETSC_FALSE; 2605fcdce8c4SStefano Zampini c->free_a = PETSC_TRUE; 2606fcdce8c4SStefano Zampini c->free_ij = PETSC_TRUE; 2607fcdce8c4SStefano Zampini ierr = PetscMalloc1(m+1,&c->i);CHKERRQ(ierr); 2608fcdce8c4SStefano Zampini ierr = PetscMalloc1(c->nz,&c->j);CHKERRQ(ierr); 2609fcdce8c4SStefano Zampini if (PetscDefined(USE_64BIT_INDICES)) { /* 32 to 64 bit conversion on the GPU and then copy to host (lazy) */ 2610fcdce8c4SStefano Zampini PetscInt *d_i = c->i; 2611fcdce8c4SStefano Zampini THRUSTINTARRAY ii(Ccsr->row_offsets->size()); 2612fcdce8c4SStefano Zampini THRUSTINTARRAY jj(Ccsr->column_indices->size()); 2613fcdce8c4SStefano Zampini ii = *Ccsr->row_offsets; 2614fcdce8c4SStefano Zampini jj = *Ccsr->column_indices; 2615fcdce8c4SStefano Zampini if (ciscompressed) d_i = c->compressedrow.i; 2616fcdce8c4SStefano Zampini cerr = cudaMemcpy(d_i,ii.data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2617fcdce8c4SStefano Zampini cerr = cudaMemcpy(c->j,jj.data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2618fcdce8c4SStefano Zampini } else { 2619fcdce8c4SStefano Zampini PetscInt *d_i = c->i; 2620fcdce8c4SStefano Zampini if (ciscompressed) d_i = c->compressedrow.i; 2621fcdce8c4SStefano Zampini cerr = cudaMemcpy(d_i,Ccsr->row_offsets->data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2622fcdce8c4SStefano Zampini cerr = cudaMemcpy(c->j,Ccsr->column_indices->data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2623fcdce8c4SStefano Zampini } 2624fcdce8c4SStefano Zampini if (ciscompressed) { /* need to expand host row offsets */ 2625fcdce8c4SStefano Zampini PetscInt r = 0; 2626fcdce8c4SStefano Zampini c->i[0] = 0; 2627fcdce8c4SStefano Zampini for (k = 0; k < c->compressedrow.nrows; k++) { 2628fcdce8c4SStefano Zampini const PetscInt next = c->compressedrow.rindex[k]; 2629fcdce8c4SStefano Zampini const PetscInt old = c->compressedrow.i[k]; 2630fcdce8c4SStefano Zampini for (; r < next; r++) c->i[r+1] = old; 2631fcdce8c4SStefano Zampini } 2632fcdce8c4SStefano Zampini for (; r < m; r++) c->i[r+1] = c->compressedrow.i[c->compressedrow.nrows]; 2633fcdce8c4SStefano Zampini } 2634fcdce8c4SStefano Zampini ierr = PetscLogGpuToCpu((Ccsr->column_indices->size() + Ccsr->row_offsets->size())*sizeof(PetscInt));CHKERRQ(ierr); 2635fcdce8c4SStefano Zampini ierr = PetscMalloc1(m,&c->ilen);CHKERRQ(ierr); 2636fcdce8c4SStefano Zampini ierr = PetscMalloc1(m,&c->imax);CHKERRQ(ierr); 2637fcdce8c4SStefano Zampini c->maxnz = c->nz; 2638fcdce8c4SStefano Zampini c->nonzerorowcnt = 0; 2639fcdce8c4SStefano Zampini c->rmax = 0; 2640fcdce8c4SStefano Zampini for (k = 0; k < m; k++) { 2641fcdce8c4SStefano Zampini const PetscInt nn = c->i[k+1] - c->i[k]; 2642fcdce8c4SStefano Zampini c->ilen[k] = c->imax[k] = nn; 2643fcdce8c4SStefano Zampini c->nonzerorowcnt += (PetscInt)!!nn; 2644fcdce8c4SStefano Zampini c->rmax = PetscMax(c->rmax,nn); 2645fcdce8c4SStefano Zampini } 2646fcdce8c4SStefano Zampini ierr = MatMarkDiagonal_SeqAIJ(C);CHKERRQ(ierr); 2647fcdce8c4SStefano Zampini ierr = PetscMalloc1(c->nz,&c->a);CHKERRQ(ierr); 2648fcdce8c4SStefano Zampini Ccsr->num_entries = c->nz; 2649fcdce8c4SStefano Zampini 2650fcdce8c4SStefano Zampini C->nonzerostate++; 2651fcdce8c4SStefano Zampini ierr = PetscLayoutSetUp(C->rmap);CHKERRQ(ierr); 2652fcdce8c4SStefano Zampini ierr = PetscLayoutSetUp(C->cmap);CHKERRQ(ierr); 2653fcdce8c4SStefano Zampini Ccusp->nonzerostate = C->nonzerostate; 2654fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_UNALLOCATED; 2655fcdce8c4SStefano Zampini C->preallocated = PETSC_TRUE; 2656fcdce8c4SStefano Zampini C->assembled = PETSC_FALSE; 2657fcdce8c4SStefano Zampini C->was_assembled = PETSC_FALSE; 2658abb89eb1SStefano Zampini if (product->api_user && A->offloadmask == PETSC_OFFLOAD_BOTH && B->offloadmask == PETSC_OFFLOAD_BOTH) { /* flag the matrix C values as computed, so that the numeric phase will only call MatAssembly */ 2659fcdce8c4SStefano Zampini mmdata->reusesym = PETSC_TRUE; 2660fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_GPU; 2661fcdce8c4SStefano Zampini } 2662fcdce8c4SStefano Zampini C->ops->productnumeric = MatProductNumeric_SeqAIJCUSPARSE_SeqAIJCUSPARSE; 2663fcdce8c4SStefano Zampini PetscFunctionReturn(0); 2664fcdce8c4SStefano Zampini } 2665fcdce8c4SStefano Zampini 2666fcdce8c4SStefano Zampini PETSC_INTERN PetscErrorCode MatProductSetFromOptions_SeqAIJ_SeqDense(Mat); 2667fcdce8c4SStefano Zampini 2668fcdce8c4SStefano Zampini /* handles sparse or dense B */ 2669fcdce8c4SStefano Zampini static PetscErrorCode MatProductSetFromOptions_SeqAIJCUSPARSE(Mat mat) 2670fcdce8c4SStefano Zampini { 2671fcdce8c4SStefano Zampini Mat_Product *product = mat->product; 2672fcdce8c4SStefano Zampini PetscErrorCode ierr; 2673fcdce8c4SStefano Zampini PetscBool isdense = PETSC_FALSE,Biscusp = PETSC_FALSE,Ciscusp = PETSC_TRUE; 2674fcdce8c4SStefano Zampini 2675fcdce8c4SStefano Zampini PetscFunctionBegin; 2676fcdce8c4SStefano Zampini MatCheckProduct(mat,1); 2677fcdce8c4SStefano Zampini ierr = PetscObjectBaseTypeCompare((PetscObject)product->B,MATSEQDENSE,&isdense);CHKERRQ(ierr); 2678abb89eb1SStefano Zampini if (!product->A->boundtocpu && !product->B->boundtocpu) { 2679fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)product->B,MATSEQAIJCUSPARSE,&Biscusp);CHKERRQ(ierr); 2680fcdce8c4SStefano Zampini } 2681fcdce8c4SStefano Zampini if (product->type == MATPRODUCT_ABC) { 2682fcdce8c4SStefano Zampini Ciscusp = PETSC_FALSE; 2683fcdce8c4SStefano Zampini if (!product->C->boundtocpu) { 2684fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)product->C,MATSEQAIJCUSPARSE,&Ciscusp);CHKERRQ(ierr); 2685fcdce8c4SStefano Zampini } 2686fcdce8c4SStefano Zampini } 2687fcdce8c4SStefano Zampini if (isdense) { 2688ccdfe979SStefano Zampini switch (product->type) { 2689ccdfe979SStefano Zampini case MATPRODUCT_AB: 2690ccdfe979SStefano Zampini case MATPRODUCT_AtB: 2691ccdfe979SStefano Zampini case MATPRODUCT_ABt: 2692ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 2693ccdfe979SStefano Zampini case MATPRODUCT_RARt: 2694fcdce8c4SStefano Zampini if (product->A->boundtocpu) { 2695fcdce8c4SStefano Zampini ierr = MatProductSetFromOptions_SeqAIJ_SeqDense(mat);CHKERRQ(ierr); 2696fcdce8c4SStefano Zampini } else { 2697fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_SeqAIJCUSPARSE_SeqDENSECUDA; 2698fcdce8c4SStefano Zampini } 2699fcdce8c4SStefano Zampini break; 2700fcdce8c4SStefano Zampini case MATPRODUCT_ABC: 2701fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_ABC_Basic; 2702fcdce8c4SStefano Zampini break; 2703ccdfe979SStefano Zampini default: 2704ccdfe979SStefano Zampini break; 2705ccdfe979SStefano Zampini } 2706fcdce8c4SStefano Zampini } else if (Biscusp && Ciscusp) { 2707fcdce8c4SStefano Zampini switch (product->type) { 2708fcdce8c4SStefano Zampini case MATPRODUCT_AB: 2709fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 2710fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 2711fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_SeqAIJCUSPARSE_SeqAIJCUSPARSE; 2712fcdce8c4SStefano Zampini break; 2713fcdce8c4SStefano Zampini case MATPRODUCT_PtAP: 2714fcdce8c4SStefano Zampini case MATPRODUCT_RARt: 2715fcdce8c4SStefano Zampini case MATPRODUCT_ABC: 2716fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_ABC_Basic; 2717fcdce8c4SStefano Zampini break; 2718fcdce8c4SStefano Zampini default: 2719fcdce8c4SStefano Zampini break; 2720fcdce8c4SStefano Zampini } 2721fcdce8c4SStefano Zampini } else { /* fallback for AIJ */ 2722fcdce8c4SStefano Zampini ierr = MatProductSetFromOptions_SeqAIJ(mat);CHKERRQ(ierr); 2723fcdce8c4SStefano Zampini } 2724ccdfe979SStefano Zampini PetscFunctionReturn(0); 2725ccdfe979SStefano Zampini } 2726ccdfe979SStefano Zampini 27276fa9248bSJed Brown static PetscErrorCode MatMult_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy) 27289ae82921SPaul Mullowney { 2729b175d8bbSPaul Mullowney PetscErrorCode ierr; 27309ae82921SPaul Mullowney 27319ae82921SPaul Mullowney PetscFunctionBegin; 2732e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,NULL,yy,PETSC_FALSE,PETSC_FALSE);CHKERRQ(ierr); 2733e6e9a74fSStefano Zampini PetscFunctionReturn(0); 2734e6e9a74fSStefano Zampini } 2735e6e9a74fSStefano Zampini 2736e6e9a74fSStefano Zampini static PetscErrorCode MatMultAdd_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy, Vec zz) 2737e6e9a74fSStefano Zampini { 2738e6e9a74fSStefano Zampini PetscErrorCode ierr; 2739e6e9a74fSStefano Zampini 2740e6e9a74fSStefano Zampini PetscFunctionBegin; 2741e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,yy,zz,PETSC_FALSE,PETSC_FALSE);CHKERRQ(ierr); 2742e6e9a74fSStefano Zampini PetscFunctionReturn(0); 2743e6e9a74fSStefano Zampini } 2744e6e9a74fSStefano Zampini 2745e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTranspose_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy) 2746e6e9a74fSStefano Zampini { 2747e6e9a74fSStefano Zampini PetscErrorCode ierr; 2748e6e9a74fSStefano Zampini 2749e6e9a74fSStefano Zampini PetscFunctionBegin; 2750e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,NULL,yy,PETSC_TRUE,PETSC_TRUE);CHKERRQ(ierr); 2751e6e9a74fSStefano Zampini PetscFunctionReturn(0); 2752e6e9a74fSStefano Zampini } 2753e6e9a74fSStefano Zampini 2754e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTransposeAdd_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy,Vec zz) 2755e6e9a74fSStefano Zampini { 2756e6e9a74fSStefano Zampini PetscErrorCode ierr; 2757e6e9a74fSStefano Zampini 2758e6e9a74fSStefano Zampini PetscFunctionBegin; 2759e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,yy,zz,PETSC_TRUE,PETSC_TRUE);CHKERRQ(ierr); 27609ae82921SPaul Mullowney PetscFunctionReturn(0); 27619ae82921SPaul Mullowney } 27629ae82921SPaul Mullowney 27636fa9248bSJed Brown static PetscErrorCode MatMultTranspose_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy) 2764ca45077fSPaul Mullowney { 2765b175d8bbSPaul Mullowney PetscErrorCode ierr; 2766ca45077fSPaul Mullowney 2767ca45077fSPaul Mullowney PetscFunctionBegin; 2768e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,NULL,yy,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr); 2769ca45077fSPaul Mullowney PetscFunctionReturn(0); 2770ca45077fSPaul Mullowney } 2771ca45077fSPaul Mullowney 2772a0e72f99SJunchao Zhang __global__ static void ScatterAdd(PetscInt n, PetscInt *idx,const PetscScalar *x,PetscScalar *y) 2773a0e72f99SJunchao Zhang { 2774a0e72f99SJunchao Zhang int i = blockIdx.x*blockDim.x + threadIdx.x; 2775a0e72f99SJunchao Zhang if (i < n) y[idx[i]] += x[i]; 2776a0e72f99SJunchao Zhang } 2777a0e72f99SJunchao Zhang 2778afb2bd1cSJunchao Zhang /* z = op(A) x + y. If trans & !herm, op = ^T; if trans & herm, op = ^H; if !trans, op = no-op */ 2779e6e9a74fSStefano Zampini static PetscErrorCode MatMultAddKernel_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy,Vec zz,PetscBool trans,PetscBool herm) 27809ae82921SPaul Mullowney { 27819ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 2782aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 27839ff858a8SKarl Rupp Mat_SeqAIJCUSPARSEMultStruct *matstruct; 2784e6e9a74fSStefano Zampini PetscScalar *xarray,*zarray,*dptr,*beta,*xptr; 2785b175d8bbSPaul Mullowney PetscErrorCode ierr; 2786aa372e3fSPaul Mullowney cusparseStatus_t stat; 2787e6e9a74fSStefano Zampini cusparseOperation_t opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2788e6e9a74fSStefano Zampini PetscBool compressed; 2789afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2790afb2bd1cSJunchao Zhang PetscInt nx,ny; 2791afb2bd1cSJunchao Zhang #endif 27926e111a19SKarl Rupp 27939ae82921SPaul Mullowney PetscFunctionBegin; 2794e8d2b73aSMark Adams if (herm && !trans) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_GPU,"Hermitian and not transpose not supported"); 2795e6e9a74fSStefano Zampini if (!a->nonzerorowcnt) { 2796afb2bd1cSJunchao Zhang if (!yy) {ierr = VecSet_SeqCUDA(zz,0);CHKERRQ(ierr);} 2797d38a13f6SStefano Zampini else {ierr = VecCopy_SeqCUDA(yy,zz);CHKERRQ(ierr);} 2798e6e9a74fSStefano Zampini PetscFunctionReturn(0); 2799e6e9a74fSStefano Zampini } 280034d6c7a5SJose E. Roman /* The line below is necessary due to the operations that modify the matrix on the CPU (axpy, scale, etc) */ 280134d6c7a5SJose E. Roman ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 2802e6e9a74fSStefano Zampini if (!trans) { 28039ff858a8SKarl Rupp matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->mat; 2804e8d2b73aSMark Adams if (!matstruct) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_GPU,"SeqAIJCUSPARSE does not have a 'mat' (need to fix)"); 2805e6e9a74fSStefano Zampini } else { 28061a2c6b5cSJunchao Zhang if (herm || !A->form_explicit_transpose) { 2807e6e9a74fSStefano Zampini opA = herm ? CUSPARSE_OPERATION_CONJUGATE_TRANSPOSE : CUSPARSE_OPERATION_TRANSPOSE; 2808e6e9a74fSStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->mat; 2809e6e9a74fSStefano Zampini } else { 28101a2c6b5cSJunchao Zhang if (!cusparsestruct->matTranspose) {ierr = MatSeqAIJCUSPARSEFormExplicitTransposeForMult(A);CHKERRQ(ierr);} 2811e6e9a74fSStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->matTranspose; 2812e6e9a74fSStefano Zampini } 2813e6e9a74fSStefano Zampini } 2814e6e9a74fSStefano Zampini /* Does the matrix use compressed rows (i.e., drop zero rows)? */ 2815e6e9a74fSStefano Zampini compressed = matstruct->cprowIndices ? PETSC_TRUE : PETSC_FALSE; 2816213423ffSJunchao Zhang 2817e6e9a74fSStefano Zampini try { 2818e6e9a74fSStefano Zampini ierr = VecCUDAGetArrayRead(xx,(const PetscScalar**)&xarray);CHKERRQ(ierr); 2819213423ffSJunchao Zhang if (yy == zz) {ierr = VecCUDAGetArray(zz,&zarray);CHKERRQ(ierr);} /* read & write zz, so need to get uptodate zarray on GPU */ 2820213423ffSJunchao Zhang else {ierr = VecCUDAGetArrayWrite(zz,&zarray);CHKERRQ(ierr);} /* write zz, so no need to init zarray on GPU */ 2821afb2bd1cSJunchao Zhang 282285ba7357SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2823e6e9a74fSStefano Zampini if (opA == CUSPARSE_OPERATION_NON_TRANSPOSE) { 2824afb2bd1cSJunchao Zhang /* z = A x + beta y. 2825afb2bd1cSJunchao Zhang If A is compressed (with less rows), then Ax is shorter than the full z, so we need a work vector to store Ax. 2826afb2bd1cSJunchao Zhang When A is non-compressed, and z = y, we can set beta=1 to compute y = Ax + y in one call. 2827afb2bd1cSJunchao Zhang */ 2828e6e9a74fSStefano Zampini xptr = xarray; 2829afb2bd1cSJunchao Zhang dptr = compressed ? cusparsestruct->workVector->data().get() : zarray; 2830213423ffSJunchao Zhang beta = (yy == zz && !compressed) ? matstruct->beta_one : matstruct->beta_zero; 2831afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2832afb2bd1cSJunchao Zhang /* Get length of x, y for y=Ax. ny might be shorter than the work vector's allocated length, since the work vector is 2833afb2bd1cSJunchao Zhang allocated to accommodate different uses. So we get the length info directly from mat. 2834afb2bd1cSJunchao Zhang */ 2835afb2bd1cSJunchao Zhang if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 2836afb2bd1cSJunchao Zhang CsrMatrix *mat = (CsrMatrix*)matstruct->mat; 2837afb2bd1cSJunchao Zhang nx = mat->num_cols; 2838afb2bd1cSJunchao Zhang ny = mat->num_rows; 2839afb2bd1cSJunchao Zhang } 2840afb2bd1cSJunchao Zhang #endif 2841e6e9a74fSStefano Zampini } else { 2842afb2bd1cSJunchao Zhang /* z = A^T x + beta y 2843afb2bd1cSJunchao Zhang If A is compressed, then we need a work vector as the shorter version of x to compute A^T x. 2844afb2bd1cSJunchao Zhang Note A^Tx is of full length, so we set beta to 1.0 if y exists. 2845afb2bd1cSJunchao Zhang */ 2846afb2bd1cSJunchao Zhang xptr = compressed ? cusparsestruct->workVector->data().get() : xarray; 2847e6e9a74fSStefano Zampini dptr = zarray; 2848e6e9a74fSStefano Zampini beta = yy ? matstruct->beta_one : matstruct->beta_zero; 2849afb2bd1cSJunchao Zhang if (compressed) { /* Scatter x to work vector */ 2850e6e9a74fSStefano Zampini thrust::device_ptr<PetscScalar> xarr = thrust::device_pointer_cast(xarray); 2851a0e72f99SJunchao Zhang thrust::for_each(thrust::cuda::par.on(PetscDefaultCudaStream),thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(xarr, matstruct->cprowIndices->begin()))), 2852e6e9a74fSStefano Zampini thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(xarr, matstruct->cprowIndices->begin()))) + matstruct->cprowIndices->size(), 2853e6e9a74fSStefano Zampini VecCUDAEqualsReverse()); 2854e6e9a74fSStefano Zampini } 2855afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2856afb2bd1cSJunchao Zhang if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 2857afb2bd1cSJunchao Zhang CsrMatrix *mat = (CsrMatrix*)matstruct->mat; 2858afb2bd1cSJunchao Zhang nx = mat->num_rows; 2859afb2bd1cSJunchao Zhang ny = mat->num_cols; 2860afb2bd1cSJunchao Zhang } 2861afb2bd1cSJunchao Zhang #endif 2862e6e9a74fSStefano Zampini } 28639ae82921SPaul Mullowney 2864afb2bd1cSJunchao Zhang /* csr_spmv does y = alpha op(A) x + beta y */ 2865aa372e3fSPaul Mullowney if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 2866afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2867afb2bd1cSJunchao Zhang if (opA < 0 || opA > 2) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE ABI on cusparseOperation_t has changed and PETSc has not been updated accordingly"); 2868afb2bd1cSJunchao Zhang if (!matstruct->cuSpMV[opA].initialized) { /* built on demand */ 2869ee7b52eaSHong Zhang cudaError_t cerr; 2870afb2bd1cSJunchao Zhang stat = cusparseCreateDnVec(&matstruct->cuSpMV[opA].vecXDescr,nx,xptr,cusparse_scalartype);CHKERRCUSPARSE(stat); 2871afb2bd1cSJunchao Zhang stat = cusparseCreateDnVec(&matstruct->cuSpMV[opA].vecYDescr,ny,dptr,cusparse_scalartype);CHKERRCUSPARSE(stat); 2872afb2bd1cSJunchao Zhang stat = cusparseSpMV_bufferSize(cusparsestruct->handle, opA, matstruct->alpha_one, 2873afb2bd1cSJunchao Zhang matstruct->matDescr, 2874afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecXDescr, beta, 2875afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecYDescr, 2876afb2bd1cSJunchao Zhang cusparse_scalartype, 2877afb2bd1cSJunchao Zhang cusparsestruct->spmvAlg, 2878afb2bd1cSJunchao Zhang &matstruct->cuSpMV[opA].spmvBufferSize);CHKERRCUSPARSE(stat); 2879afb2bd1cSJunchao Zhang cerr = cudaMalloc(&matstruct->cuSpMV[opA].spmvBuffer,matstruct->cuSpMV[opA].spmvBufferSize);CHKERRCUDA(cerr); 2880afb2bd1cSJunchao Zhang 2881afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].initialized = PETSC_TRUE; 2882afb2bd1cSJunchao Zhang } else { 2883afb2bd1cSJunchao Zhang /* x, y's value pointers might change between calls, but their shape is kept, so we just update pointers */ 2884afb2bd1cSJunchao Zhang stat = cusparseDnVecSetValues(matstruct->cuSpMV[opA].vecXDescr,xptr);CHKERRCUSPARSE(stat); 2885afb2bd1cSJunchao Zhang stat = cusparseDnVecSetValues(matstruct->cuSpMV[opA].vecYDescr,dptr);CHKERRCUSPARSE(stat); 2886afb2bd1cSJunchao Zhang } 2887afb2bd1cSJunchao Zhang 2888afb2bd1cSJunchao Zhang stat = cusparseSpMV(cusparsestruct->handle, opA, 2889afb2bd1cSJunchao Zhang matstruct->alpha_one, 28901a2c6b5cSJunchao Zhang matstruct->matDescr, /* built in MatSeqAIJCUSPARSECopyToGPU() or MatSeqAIJCUSPARSEFormExplicitTransposeForMult() */ 2891afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecXDescr, 2892afb2bd1cSJunchao Zhang beta, 2893afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecYDescr, 2894afb2bd1cSJunchao Zhang cusparse_scalartype, 2895afb2bd1cSJunchao Zhang cusparsestruct->spmvAlg, 2896afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].spmvBuffer);CHKERRCUSPARSE(stat); 2897afb2bd1cSJunchao Zhang #else 28987656d835SStefano Zampini CsrMatrix *mat = (CsrMatrix*)matstruct->mat; 2899e6e9a74fSStefano Zampini stat = cusparse_csr_spmv(cusparsestruct->handle, opA, 2900a65300a6SPaul Mullowney mat->num_rows, mat->num_cols, 2901afb2bd1cSJunchao Zhang mat->num_entries, matstruct->alpha_one, matstruct->descr, 2902aa372e3fSPaul Mullowney mat->values->data().get(), mat->row_offsets->data().get(), 2903e6e9a74fSStefano Zampini mat->column_indices->data().get(), xptr, beta, 290457d48284SJunchao Zhang dptr);CHKERRCUSPARSE(stat); 2905afb2bd1cSJunchao Zhang #endif 2906aa372e3fSPaul Mullowney } else { 2907213423ffSJunchao Zhang if (cusparsestruct->nrows) { 2908afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2909afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 2910afb2bd1cSJunchao Zhang #else 2911301298b4SMark Adams cusparseHybMat_t hybMat = (cusparseHybMat_t)matstruct->mat; 2912e6e9a74fSStefano Zampini stat = cusparse_hyb_spmv(cusparsestruct->handle, opA, 2913afb2bd1cSJunchao Zhang matstruct->alpha_one, matstruct->descr, hybMat, 2914e6e9a74fSStefano Zampini xptr, beta, 291557d48284SJunchao Zhang dptr);CHKERRCUSPARSE(stat); 2916afb2bd1cSJunchao Zhang #endif 2917a65300a6SPaul Mullowney } 2918aa372e3fSPaul Mullowney } 2919958c4211Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2920aa372e3fSPaul Mullowney 2921e6e9a74fSStefano Zampini if (opA == CUSPARSE_OPERATION_NON_TRANSPOSE) { 2922213423ffSJunchao Zhang if (yy) { /* MatMultAdd: zz = A*xx + yy */ 2923213423ffSJunchao Zhang if (compressed) { /* A is compressed. We first copy yy to zz, then ScatterAdd the work vector to zz */ 2924213423ffSJunchao Zhang ierr = VecCopy_SeqCUDA(yy,zz);CHKERRQ(ierr); /* zz = yy */ 2925e6e9a74fSStefano Zampini } else if (zz != yy) { /* A is not compressed. zz already contains A*xx, and we just need to add yy */ 2926213423ffSJunchao Zhang ierr = VecAXPY_SeqCUDA(zz,1.0,yy);CHKERRQ(ierr); /* zz += yy */ 29277656d835SStefano Zampini } 2928213423ffSJunchao Zhang } else if (compressed) { /* MatMult: zz = A*xx. A is compressed, so we zero zz first, then ScatterAdd the work vector to zz */ 2929c1fb3f03SStefano Zampini ierr = VecSet_SeqCUDA(zz,0);CHKERRQ(ierr); 29307656d835SStefano Zampini } 29317656d835SStefano Zampini 2932213423ffSJunchao Zhang /* ScatterAdd the result from work vector into the full vector when A is compressed */ 2933213423ffSJunchao Zhang if (compressed) { 2934e6e9a74fSStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2935a0e72f99SJunchao Zhang /* I wanted to make this for_each asynchronous but failed. thrust::async::for_each() returns an event (internally registerred) 2936a0e72f99SJunchao Zhang and in the destructor of the scope, it will call cudaStreamSynchronize() on this stream. One has to store all events to 2937a0e72f99SJunchao Zhang prevent that. So I just add a ScatterAdd kernel. 2938a0e72f99SJunchao Zhang */ 2939a0e72f99SJunchao Zhang #if 0 2940a0e72f99SJunchao Zhang thrust::device_ptr<PetscScalar> zptr = thrust::device_pointer_cast(zarray); 2941a0e72f99SJunchao Zhang thrust::async::for_each(thrust::cuda::par.on(cusparsestruct->stream), 2942a0e72f99SJunchao Zhang thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(zptr, matstruct->cprowIndices->begin()))), 2943e6e9a74fSStefano Zampini thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(zptr, matstruct->cprowIndices->begin()))) + matstruct->cprowIndices->size(), 2944c41cb2e2SAlejandro Lamas Daviña VecCUDAPlusEquals()); 2945a0e72f99SJunchao Zhang #else 2946a0e72f99SJunchao Zhang PetscInt n = matstruct->cprowIndices->size(); 2947a0e72f99SJunchao Zhang ScatterAdd<<<(n+255)/256,256,0,PetscDefaultCudaStream>>>(n,matstruct->cprowIndices->data().get(),cusparsestruct->workVector->data().get(),zarray); 2948a0e72f99SJunchao Zhang #endif 2949958c4211Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2950e6e9a74fSStefano Zampini } 2951e6e9a74fSStefano Zampini } else { 2952e6e9a74fSStefano Zampini if (yy && yy != zz) { 2953e6e9a74fSStefano Zampini ierr = VecAXPY_SeqCUDA(zz,1.0,yy);CHKERRQ(ierr); /* zz += yy */ 2954e6e9a74fSStefano Zampini } 2955e6e9a74fSStefano Zampini } 2956e6e9a74fSStefano Zampini ierr = VecCUDARestoreArrayRead(xx,(const PetscScalar**)&xarray);CHKERRQ(ierr); 2957213423ffSJunchao Zhang if (yy == zz) {ierr = VecCUDARestoreArray(zz,&zarray);CHKERRQ(ierr);} 2958213423ffSJunchao Zhang else {ierr = VecCUDARestoreArrayWrite(zz,&zarray);CHKERRQ(ierr);} 29599ae82921SPaul Mullowney } catch(char *ex) { 29609ae82921SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 29619ae82921SPaul Mullowney } 2962e6e9a74fSStefano Zampini if (yy) { 2963958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*a->nz);CHKERRQ(ierr); 2964e6e9a74fSStefano Zampini } else { 2965e6e9a74fSStefano Zampini ierr = PetscLogGpuFlops(2.0*a->nz-a->nonzerorowcnt);CHKERRQ(ierr); 2966e6e9a74fSStefano Zampini } 29679ae82921SPaul Mullowney PetscFunctionReturn(0); 29689ae82921SPaul Mullowney } 29699ae82921SPaul Mullowney 29706fa9248bSJed Brown static PetscErrorCode MatMultTransposeAdd_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy,Vec zz) 2971ca45077fSPaul Mullowney { 2972b175d8bbSPaul Mullowney PetscErrorCode ierr; 29736e111a19SKarl Rupp 2974ca45077fSPaul Mullowney PetscFunctionBegin; 2975e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,yy,zz,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr); 2976ca45077fSPaul Mullowney PetscFunctionReturn(0); 2977ca45077fSPaul Mullowney } 2978ca45077fSPaul Mullowney 29796fa9248bSJed Brown static PetscErrorCode MatAssemblyEnd_SeqAIJCUSPARSE(Mat A,MatAssemblyType mode) 29809ae82921SPaul Mullowney { 29819ae82921SPaul Mullowney PetscErrorCode ierr; 2982a587d139SMark PetscSplitCSRDataStructure *d_mat = NULL; 29839ae82921SPaul Mullowney PetscFunctionBegin; 2984bc3f50f2SPaul Mullowney if (A->factortype == MAT_FACTOR_NONE) { 29853fa6b06aSMark Adams d_mat = ((Mat_SeqAIJCUSPARSE*)A->spptr)->deviceMat; 2986bc3f50f2SPaul Mullowney } 29873fa6b06aSMark Adams ierr = MatAssemblyEnd_SeqAIJ(A,mode);CHKERRQ(ierr); // this does very little if assembled on GPU - call it? 29883fa6b06aSMark Adams if (mode == MAT_FLUSH_ASSEMBLY || A->boundtocpu) PetscFunctionReturn(0); 2989a587d139SMark if (d_mat) { 29903fa6b06aSMark Adams A->offloadmask = PETSC_OFFLOAD_GPU; 29913fa6b06aSMark Adams } 29923fa6b06aSMark Adams 29939ae82921SPaul Mullowney PetscFunctionReturn(0); 29949ae82921SPaul Mullowney } 29959ae82921SPaul Mullowney 29969ae82921SPaul Mullowney /* --------------------------------------------------------------------------------*/ 2997e057df02SPaul Mullowney /*@ 29989ae82921SPaul Mullowney MatCreateSeqAIJCUSPARSE - Creates a sparse matrix in AIJ (compressed row) format 2999e057df02SPaul Mullowney (the default parallel PETSc format). This matrix will ultimately pushed down 3000e057df02SPaul Mullowney to NVidia GPUs and use the CUSPARSE library for calculations. For good matrix 3001e057df02SPaul Mullowney assembly performance the user should preallocate the matrix storage by setting 3002e057df02SPaul Mullowney the parameter nz (or the array nnz). By setting these parameters accurately, 3003e057df02SPaul Mullowney performance during matrix assembly can be increased by more than a factor of 50. 30049ae82921SPaul Mullowney 3005d083f849SBarry Smith Collective 30069ae82921SPaul Mullowney 30079ae82921SPaul Mullowney Input Parameters: 30089ae82921SPaul Mullowney + comm - MPI communicator, set to PETSC_COMM_SELF 30099ae82921SPaul Mullowney . m - number of rows 30109ae82921SPaul Mullowney . n - number of columns 30119ae82921SPaul Mullowney . nz - number of nonzeros per row (same for all rows) 30129ae82921SPaul Mullowney - nnz - array containing the number of nonzeros in the various rows 30130298fd71SBarry Smith (possibly different for each row) or NULL 30149ae82921SPaul Mullowney 30159ae82921SPaul Mullowney Output Parameter: 30169ae82921SPaul Mullowney . A - the matrix 30179ae82921SPaul Mullowney 30189ae82921SPaul Mullowney It is recommended that one use the MatCreate(), MatSetType() and/or MatSetFromOptions(), 30199ae82921SPaul Mullowney MatXXXXSetPreallocation() paradgm instead of this routine directly. 30209ae82921SPaul Mullowney [MatXXXXSetPreallocation() is, for example, MatSeqAIJSetPreallocation] 30219ae82921SPaul Mullowney 30229ae82921SPaul Mullowney Notes: 30239ae82921SPaul Mullowney If nnz is given then nz is ignored 30249ae82921SPaul Mullowney 30259ae82921SPaul Mullowney The AIJ format (also called the Yale sparse matrix format or 30269ae82921SPaul Mullowney compressed row storage), is fully compatible with standard Fortran 77 30279ae82921SPaul Mullowney storage. That is, the stored row and column indices can begin at 30289ae82921SPaul Mullowney either one (as in Fortran) or zero. See the users' manual for details. 30299ae82921SPaul Mullowney 30309ae82921SPaul Mullowney Specify the preallocated storage with either nz or nnz (not both). 30310298fd71SBarry Smith Set nz=PETSC_DEFAULT and nnz=NULL for PETSc to control dynamic memory 30329ae82921SPaul Mullowney allocation. For large problems you MUST preallocate memory or you 30339ae82921SPaul Mullowney will get TERRIBLE performance, see the users' manual chapter on matrices. 30349ae82921SPaul Mullowney 30359ae82921SPaul Mullowney By default, this format uses inodes (identical nodes) when possible, to 30369ae82921SPaul Mullowney improve numerical efficiency of matrix-vector products and solves. We 30379ae82921SPaul Mullowney search for consecutive rows with the same nonzero structure, thereby 30389ae82921SPaul Mullowney reusing matrix information to achieve increased efficiency. 30399ae82921SPaul Mullowney 30409ae82921SPaul Mullowney Level: intermediate 30419ae82921SPaul Mullowney 3042e057df02SPaul Mullowney .seealso: MatCreate(), MatCreateAIJ(), MatSetValues(), MatSeqAIJSetColumnIndices(), MatCreateSeqAIJWithArrays(), MatCreateAIJ(), MATSEQAIJCUSPARSE, MATAIJCUSPARSE 30439ae82921SPaul Mullowney @*/ 30449ae82921SPaul Mullowney PetscErrorCode MatCreateSeqAIJCUSPARSE(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt nz,const PetscInt nnz[],Mat *A) 30459ae82921SPaul Mullowney { 30469ae82921SPaul Mullowney PetscErrorCode ierr; 30479ae82921SPaul Mullowney 30489ae82921SPaul Mullowney PetscFunctionBegin; 30499ae82921SPaul Mullowney ierr = MatCreate(comm,A);CHKERRQ(ierr); 30509ae82921SPaul Mullowney ierr = MatSetSizes(*A,m,n,m,n);CHKERRQ(ierr); 30519ae82921SPaul Mullowney ierr = MatSetType(*A,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 30529ae82921SPaul Mullowney ierr = MatSeqAIJSetPreallocation_SeqAIJ(*A,nz,(PetscInt*)nnz);CHKERRQ(ierr); 30539ae82921SPaul Mullowney PetscFunctionReturn(0); 30549ae82921SPaul Mullowney } 30559ae82921SPaul Mullowney 30566fa9248bSJed Brown static PetscErrorCode MatDestroy_SeqAIJCUSPARSE(Mat A) 30579ae82921SPaul Mullowney { 30589ae82921SPaul Mullowney PetscErrorCode ierr; 30593fa6b06aSMark Adams PetscSplitCSRDataStructure *d_mat = NULL; 3060ab25e6cbSDominic Meiser 30619ae82921SPaul Mullowney PetscFunctionBegin; 30629ae82921SPaul Mullowney if (A->factortype == MAT_FACTOR_NONE) { 30633fa6b06aSMark Adams d_mat = ((Mat_SeqAIJCUSPARSE*)A->spptr)->deviceMat; 30643fa6b06aSMark Adams ((Mat_SeqAIJCUSPARSE*)A->spptr)->deviceMat = NULL; 3065470880abSPatrick Sanan ierr = MatSeqAIJCUSPARSE_Destroy((Mat_SeqAIJCUSPARSE**)&A->spptr);CHKERRQ(ierr); 30669ae82921SPaul Mullowney } else { 3067470880abSPatrick Sanan ierr = MatSeqAIJCUSPARSETriFactors_Destroy((Mat_SeqAIJCUSPARSETriFactors**)&A->spptr);CHKERRQ(ierr); 3068aa372e3fSPaul Mullowney } 30693fa6b06aSMark Adams if (d_mat) { 30703fa6b06aSMark Adams Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 30713fa6b06aSMark Adams cudaError_t err; 30723fa6b06aSMark Adams PetscSplitCSRDataStructure h_mat; 30733fa6b06aSMark Adams ierr = PetscInfo(A,"Have device matrix\n");CHKERRQ(ierr); 30743fa6b06aSMark Adams err = cudaMemcpy( &h_mat, d_mat, sizeof(PetscSplitCSRDataStructure), cudaMemcpyDeviceToHost);CHKERRCUDA(err); 30753fa6b06aSMark Adams if (a->compressedrow.use) { 30763fa6b06aSMark Adams err = cudaFree(h_mat.diag.i);CHKERRCUDA(err); 30773fa6b06aSMark Adams } 30783fa6b06aSMark Adams err = cudaFree(d_mat);CHKERRCUDA(err); 30793fa6b06aSMark Adams } 3080c215019aSStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJCopySubArray_C",NULL);CHKERRQ(ierr); 3081ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatCUSPARSESetFormat_C",NULL);CHKERRQ(ierr); 3082ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C",NULL);CHKERRQ(ierr); 3083ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdense_C",NULL);CHKERRQ(ierr); 3084fcdce8c4SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C",NULL);CHKERRQ(ierr); 3085ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL);CHKERRQ(ierr); 30867e8381f9SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",NULL);CHKERRQ(ierr); 30877e8381f9SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",NULL);CHKERRQ(ierr); 30889ae82921SPaul Mullowney ierr = MatDestroy_SeqAIJ(A);CHKERRQ(ierr); 30899ae82921SPaul Mullowney PetscFunctionReturn(0); 30909ae82921SPaul Mullowney } 30919ae82921SPaul Mullowney 3092ccdfe979SStefano Zampini PETSC_INTERN PetscErrorCode MatConvert_SeqAIJ_SeqAIJCUSPARSE(Mat,MatType,MatReuse,Mat*); 309395639643SRichard Tran Mills static PetscErrorCode MatBindToCPU_SeqAIJCUSPARSE(Mat,PetscBool); 30949ff858a8SKarl Rupp static PetscErrorCode MatDuplicate_SeqAIJCUSPARSE(Mat A,MatDuplicateOption cpvalues,Mat *B) 30959ff858a8SKarl Rupp { 30969ff858a8SKarl Rupp PetscErrorCode ierr; 30979ff858a8SKarl Rupp 30989ff858a8SKarl Rupp PetscFunctionBegin; 30999ff858a8SKarl Rupp ierr = MatDuplicate_SeqAIJ(A,cpvalues,B);CHKERRQ(ierr); 3100ccdfe979SStefano Zampini ierr = MatConvert_SeqAIJ_SeqAIJCUSPARSE(*B,MATSEQAIJCUSPARSE,MAT_INPLACE_MATRIX,B);CHKERRQ(ierr); 31019ff858a8SKarl Rupp PetscFunctionReturn(0); 31029ff858a8SKarl Rupp } 31039ff858a8SKarl Rupp 3104039c6fbaSStefano Zampini static PetscErrorCode MatAXPY_SeqAIJCUSPARSE(Mat Y,PetscScalar a,Mat X,MatStructure str) 310595639643SRichard Tran Mills { 3106e6e9a74fSStefano Zampini PetscErrorCode ierr; 3107a587d139SMark Mat_SeqAIJ *x = (Mat_SeqAIJ*)X->data,*y = (Mat_SeqAIJ*)Y->data; 3108039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cy; 3109039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cx; 3110039c6fbaSStefano Zampini PetscScalar *ay; 3111039c6fbaSStefano Zampini const PetscScalar *ax; 3112039c6fbaSStefano Zampini CsrMatrix *csry,*csrx; 3113e6e9a74fSStefano Zampini 311495639643SRichard Tran Mills PetscFunctionBegin; 3115a49f1ed0SStefano Zampini cy = (Mat_SeqAIJCUSPARSE*)Y->spptr; 3116a49f1ed0SStefano Zampini cx = (Mat_SeqAIJCUSPARSE*)X->spptr; 3117039c6fbaSStefano Zampini if (X->ops->axpy != Y->ops->axpy) { 3118a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(Y,PETSC_FALSE);CHKERRQ(ierr); 3119a587d139SMark ierr = MatAXPY_SeqAIJ(Y,a,X,str);CHKERRQ(ierr); 3120a587d139SMark PetscFunctionReturn(0); 312195639643SRichard Tran Mills } 3122039c6fbaSStefano Zampini /* if we are here, it means both matrices are bound to GPU */ 3123a587d139SMark ierr = MatSeqAIJCUSPARSECopyToGPU(Y);CHKERRQ(ierr); 3124a587d139SMark ierr = MatSeqAIJCUSPARSECopyToGPU(X);CHKERRQ(ierr); 3125e8d2b73aSMark Adams if (cy->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)Y),PETSC_ERR_GPU,"only MAT_CUSPARSE_CSR supported"); 3126e8d2b73aSMark Adams if (cx->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)X),PETSC_ERR_GPU,"only MAT_CUSPARSE_CSR supported"); 3127039c6fbaSStefano Zampini csry = (CsrMatrix*)cy->mat->mat; 3128039c6fbaSStefano Zampini csrx = (CsrMatrix*)cx->mat->mat; 3129039c6fbaSStefano Zampini /* see if we can turn this into a cublas axpy */ 3130039c6fbaSStefano Zampini if (str != SAME_NONZERO_PATTERN && x->nz == y->nz && !x->compressedrow.use && !y->compressedrow.use) { 3131039c6fbaSStefano Zampini bool eq = thrust::equal(thrust::device,csry->row_offsets->begin(),csry->row_offsets->end(),csrx->row_offsets->begin()); 3132039c6fbaSStefano Zampini if (eq) { 3133039c6fbaSStefano Zampini eq = thrust::equal(thrust::device,csry->column_indices->begin(),csry->column_indices->end(),csrx->column_indices->begin()); 3134039c6fbaSStefano Zampini } 3135039c6fbaSStefano Zampini if (eq) str = SAME_NONZERO_PATTERN; 3136039c6fbaSStefano Zampini } 3137d2be01edSStefano Zampini /* spgeam is buggy with one column */ 3138d2be01edSStefano Zampini if (Y->cmap->n == 1 && str != SAME_NONZERO_PATTERN) str = DIFFERENT_NONZERO_PATTERN; 3139039c6fbaSStefano Zampini 3140039c6fbaSStefano Zampini if (str == SUBSET_NONZERO_PATTERN) { 3141039c6fbaSStefano Zampini cusparseStatus_t stat; 3142039c6fbaSStefano Zampini PetscScalar b = 1.0; 3143039c6fbaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3144039c6fbaSStefano Zampini size_t bufferSize; 3145039c6fbaSStefano Zampini void *buffer; 3146ee7b52eaSHong Zhang cudaError_t cerr; 3147039c6fbaSStefano Zampini #endif 3148039c6fbaSStefano Zampini 3149039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArrayRead(X,&ax);CHKERRQ(ierr); 3150039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArray(Y,&ay);CHKERRQ(ierr); 3151039c6fbaSStefano Zampini stat = cusparseSetPointerMode(cy->handle, CUSPARSE_POINTER_MODE_HOST);CHKERRCUSPARSE(stat); 3152039c6fbaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3153039c6fbaSStefano Zampini stat = cusparse_csr_spgeam_bufferSize(cy->handle,Y->rmap->n,Y->cmap->n, 3154039c6fbaSStefano Zampini &a,cx->mat->descr,x->nz,ax,csrx->row_offsets->data().get(),csrx->column_indices->data().get(), 3155039c6fbaSStefano Zampini &b,cy->mat->descr,y->nz,ay,csry->row_offsets->data().get(),csry->column_indices->data().get(), 3156039c6fbaSStefano Zampini cy->mat->descr, ay,csry->row_offsets->data().get(),csry->column_indices->data().get(),&bufferSize);CHKERRCUSPARSE(stat); 3157039c6fbaSStefano Zampini cerr = cudaMalloc(&buffer,bufferSize);CHKERRCUDA(cerr); 3158039c6fbaSStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3159039c6fbaSStefano Zampini stat = cusparse_csr_spgeam(cy->handle,Y->rmap->n,Y->cmap->n, 3160039c6fbaSStefano Zampini &a,cx->mat->descr,x->nz,ax,csrx->row_offsets->data().get(),csrx->column_indices->data().get(), 3161039c6fbaSStefano Zampini &b,cy->mat->descr,y->nz,ay,csry->row_offsets->data().get(),csry->column_indices->data().get(), 3162039c6fbaSStefano Zampini cy->mat->descr, ay,csry->row_offsets->data().get(),csry->column_indices->data().get(),buffer);CHKERRCUSPARSE(stat); 3163039c6fbaSStefano Zampini ierr = PetscLogGpuFlops(x->nz + y->nz);CHKERRQ(ierr); 3164039c6fbaSStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3165039c6fbaSStefano Zampini cerr = cudaFree(buffer);CHKERRCUDA(cerr); 3166039c6fbaSStefano Zampini #else 3167039c6fbaSStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3168039c6fbaSStefano Zampini stat = cusparse_csr_spgeam(cy->handle,Y->rmap->n,Y->cmap->n, 3169039c6fbaSStefano Zampini &a,cx->mat->descr,x->nz,ax,csrx->row_offsets->data().get(),csrx->column_indices->data().get(), 3170039c6fbaSStefano Zampini &b,cy->mat->descr,y->nz,ay,csry->row_offsets->data().get(),csry->column_indices->data().get(), 3171039c6fbaSStefano Zampini cy->mat->descr, ay,csry->row_offsets->data().get(),csry->column_indices->data().get());CHKERRCUSPARSE(stat); 3172039c6fbaSStefano Zampini ierr = PetscLogGpuFlops(x->nz + y->nz);CHKERRQ(ierr); 3173039c6fbaSStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3174039c6fbaSStefano Zampini #endif 3175039c6fbaSStefano Zampini stat = cusparseSetPointerMode(cy->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 3176039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArrayRead(X,&ax);CHKERRQ(ierr); 3177039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArray(Y,&ay);CHKERRQ(ierr); 3178039c6fbaSStefano Zampini ierr = MatSeqAIJInvalidateDiagonal(Y);CHKERRQ(ierr); 3179039c6fbaSStefano Zampini } else if (str == SAME_NONZERO_PATTERN) { 3180a587d139SMark cublasHandle_t cublasv2handle; 3181039c6fbaSStefano Zampini cublasStatus_t berr; 3182a587d139SMark PetscBLASInt one = 1, bnz = 1; 3183039c6fbaSStefano Zampini 3184039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArrayRead(X,&ax);CHKERRQ(ierr); 3185039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArray(Y,&ay);CHKERRQ(ierr); 3186a587d139SMark ierr = PetscCUBLASGetHandle(&cublasv2handle);CHKERRQ(ierr); 3187a587d139SMark ierr = PetscBLASIntCast(x->nz,&bnz);CHKERRQ(ierr); 3188a587d139SMark ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3189039c6fbaSStefano Zampini berr = cublasXaxpy(cublasv2handle,bnz,&a,ax,one,ay,one);CHKERRCUBLAS(berr); 3190a587d139SMark ierr = PetscLogGpuFlops(2.0*bnz);CHKERRQ(ierr); 3191a587d139SMark ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3192039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArrayRead(X,&ax);CHKERRQ(ierr); 3193039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArray(Y,&ay);CHKERRQ(ierr); 3194a587d139SMark ierr = MatSeqAIJInvalidateDiagonal(Y);CHKERRQ(ierr); 3195039c6fbaSStefano Zampini } else { 3196a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(Y,PETSC_FALSE);CHKERRQ(ierr); 3197d2be01edSStefano Zampini ierr = MatAXPY_SeqAIJ(Y,a,X,str);CHKERRQ(ierr); 3198a587d139SMark } 319995639643SRichard Tran Mills PetscFunctionReturn(0); 320095639643SRichard Tran Mills } 320195639643SRichard Tran Mills 320233c9ba73SStefano Zampini static PetscErrorCode MatScale_SeqAIJCUSPARSE(Mat Y,PetscScalar a) 320333c9ba73SStefano Zampini { 320433c9ba73SStefano Zampini PetscErrorCode ierr; 320533c9ba73SStefano Zampini Mat_SeqAIJ *y = (Mat_SeqAIJ*)Y->data; 320633c9ba73SStefano Zampini PetscScalar *ay; 320733c9ba73SStefano Zampini cublasHandle_t cublasv2handle; 320833c9ba73SStefano Zampini cublasStatus_t berr; 320933c9ba73SStefano Zampini PetscBLASInt one = 1, bnz = 1; 321033c9ba73SStefano Zampini 321133c9ba73SStefano Zampini PetscFunctionBegin; 321233c9ba73SStefano Zampini ierr = MatSeqAIJCUSPARSEGetArray(Y,&ay);CHKERRQ(ierr); 321333c9ba73SStefano Zampini ierr = PetscCUBLASGetHandle(&cublasv2handle);CHKERRQ(ierr); 321433c9ba73SStefano Zampini ierr = PetscBLASIntCast(y->nz,&bnz);CHKERRQ(ierr); 321533c9ba73SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 321633c9ba73SStefano Zampini berr = cublasXscal(cublasv2handle,bnz,&a,ay,one);CHKERRCUBLAS(berr); 321733c9ba73SStefano Zampini ierr = PetscLogGpuFlops(bnz);CHKERRQ(ierr); 321833c9ba73SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 321933c9ba73SStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArray(Y,&ay);CHKERRQ(ierr); 322033c9ba73SStefano Zampini ierr = MatSeqAIJInvalidateDiagonal(Y);CHKERRQ(ierr); 322133c9ba73SStefano Zampini PetscFunctionReturn(0); 322233c9ba73SStefano Zampini } 322333c9ba73SStefano Zampini 32243fa6b06aSMark Adams static PetscErrorCode MatZeroEntries_SeqAIJCUSPARSE(Mat A) 32253fa6b06aSMark Adams { 32263fa6b06aSMark Adams PetscErrorCode ierr; 32277e8381f9SStefano Zampini PetscBool both = PETSC_FALSE; 3228a587d139SMark Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 32297e8381f9SStefano Zampini 32303fa6b06aSMark Adams PetscFunctionBegin; 32313fa6b06aSMark Adams if (A->factortype == MAT_FACTOR_NONE) { 32323fa6b06aSMark Adams Mat_SeqAIJCUSPARSE *spptr = (Mat_SeqAIJCUSPARSE*)A->spptr; 32337e8381f9SStefano Zampini if (spptr->mat) { 32347e8381f9SStefano Zampini CsrMatrix* matrix = (CsrMatrix*)spptr->mat->mat; 32357e8381f9SStefano Zampini if (matrix->values) { 32367e8381f9SStefano Zampini both = PETSC_TRUE; 32377e8381f9SStefano Zampini thrust::fill(thrust::device,matrix->values->begin(),matrix->values->end(),0.); 32387e8381f9SStefano Zampini } 32397e8381f9SStefano Zampini } 32407e8381f9SStefano Zampini if (spptr->matTranspose) { 32417e8381f9SStefano Zampini CsrMatrix* matrix = (CsrMatrix*)spptr->matTranspose->mat; 32427e8381f9SStefano Zampini if (matrix->values) { 32437e8381f9SStefano Zampini thrust::fill(thrust::device,matrix->values->begin(),matrix->values->end(),0.); 32447e8381f9SStefano Zampini } 32457e8381f9SStefano Zampini } 32463fa6b06aSMark Adams } 3247a587d139SMark //ierr = MatZeroEntries_SeqAIJ(A);CHKERRQ(ierr); 3248a587d139SMark ierr = PetscArrayzero(a->a,a->i[A->rmap->n]);CHKERRQ(ierr); 3249a587d139SMark ierr = MatSeqAIJInvalidateDiagonal(A);CHKERRQ(ierr); 32507e8381f9SStefano Zampini if (both) A->offloadmask = PETSC_OFFLOAD_BOTH; 3251a587d139SMark else A->offloadmask = PETSC_OFFLOAD_CPU; 32523fa6b06aSMark Adams 32533fa6b06aSMark Adams PetscFunctionReturn(0); 32543fa6b06aSMark Adams } 32553fa6b06aSMark Adams 3256a587d139SMark static PetscErrorCode MatBindToCPU_SeqAIJCUSPARSE(Mat A,PetscBool flg) 3257a587d139SMark { 3258a587d139SMark Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 3259a587d139SMark PetscErrorCode ierr; 3260a587d139SMark 3261a587d139SMark PetscFunctionBegin; 3262a587d139SMark if (A->factortype != MAT_FACTOR_NONE) PetscFunctionReturn(0); 3263a587d139SMark if (flg) { 3264a587d139SMark ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 3265a587d139SMark 326633c9ba73SStefano Zampini A->ops->scale = MatScale_SeqAIJ; 3267a587d139SMark A->ops->axpy = MatAXPY_SeqAIJ; 3268a587d139SMark A->ops->zeroentries = MatZeroEntries_SeqAIJ; 3269a587d139SMark A->ops->mult = MatMult_SeqAIJ; 3270a587d139SMark A->ops->multadd = MatMultAdd_SeqAIJ; 3271a587d139SMark A->ops->multtranspose = MatMultTranspose_SeqAIJ; 3272a587d139SMark A->ops->multtransposeadd = MatMultTransposeAdd_SeqAIJ; 3273a587d139SMark A->ops->multhermitiantranspose = NULL; 3274a587d139SMark A->ops->multhermitiantransposeadd = NULL; 3275fcdce8c4SStefano Zampini A->ops->productsetfromoptions = MatProductSetFromOptions_SeqAIJ; 3276c215019aSStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJCopySubArray_C",NULL);CHKERRQ(ierr); 3277a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C",NULL);CHKERRQ(ierr); 3278a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdense_C",NULL);CHKERRQ(ierr); 3279a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",NULL);CHKERRQ(ierr); 3280a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",NULL);CHKERRQ(ierr); 3281a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJGetArray_C",MatSeqAIJGetArray_SeqAIJ);CHKERRQ(ierr); 3282fcdce8c4SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C",NULL);CHKERRQ(ierr); 3283a587d139SMark } else { 328433c9ba73SStefano Zampini A->ops->scale = MatScale_SeqAIJCUSPARSE; 3285a587d139SMark A->ops->axpy = MatAXPY_SeqAIJCUSPARSE; 3286a587d139SMark A->ops->zeroentries = MatZeroEntries_SeqAIJCUSPARSE; 3287a587d139SMark A->ops->mult = MatMult_SeqAIJCUSPARSE; 3288a587d139SMark A->ops->multadd = MatMultAdd_SeqAIJCUSPARSE; 3289a587d139SMark A->ops->multtranspose = MatMultTranspose_SeqAIJCUSPARSE; 3290a587d139SMark A->ops->multtransposeadd = MatMultTransposeAdd_SeqAIJCUSPARSE; 3291a587d139SMark A->ops->multhermitiantranspose = MatMultHermitianTranspose_SeqAIJCUSPARSE; 3292a587d139SMark A->ops->multhermitiantransposeadd = MatMultHermitianTransposeAdd_SeqAIJCUSPARSE; 3293fcdce8c4SStefano Zampini A->ops->productsetfromoptions = MatProductSetFromOptions_SeqAIJCUSPARSE; 3294c215019aSStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJCopySubArray_C",MatSeqAIJCopySubArray_SeqAIJCUSPARSE);CHKERRQ(ierr); 3295a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C",MatProductSetFromOptions_SeqAIJCUSPARSE);CHKERRQ(ierr); 3296a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdense_C",MatProductSetFromOptions_SeqAIJCUSPARSE);CHKERRQ(ierr); 3297a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",MatSetPreallocationCOO_SeqAIJCUSPARSE);CHKERRQ(ierr); 3298a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",MatSetValuesCOO_SeqAIJCUSPARSE);CHKERRQ(ierr); 3299a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJGetArray_C",MatSeqAIJGetArray_SeqAIJCUSPARSE);CHKERRQ(ierr); 3300fcdce8c4SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C",MatProductSetFromOptions_SeqAIJCUSPARSE);CHKERRQ(ierr); 3301a587d139SMark } 3302a587d139SMark A->boundtocpu = flg; 3303a587d139SMark a->inode.use = flg; 3304a587d139SMark PetscFunctionReturn(0); 3305a587d139SMark } 3306a587d139SMark 330749735bf3SStefano Zampini PETSC_INTERN PetscErrorCode MatConvert_SeqAIJ_SeqAIJCUSPARSE(Mat A, MatType mtype, MatReuse reuse, Mat* newmat) 33089ae82921SPaul Mullowney { 33099ae82921SPaul Mullowney PetscErrorCode ierr; 3310aa372e3fSPaul Mullowney cusparseStatus_t stat; 331149735bf3SStefano Zampini Mat B; 33129ae82921SPaul Mullowney 33139ae82921SPaul Mullowney PetscFunctionBegin; 3314832b2c02SStefano Zampini ierr = PetscCUDAInitializeCheck();CHKERRQ(ierr); /* first use of CUSPARSE may be via MatConvert */ 331549735bf3SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 331649735bf3SStefano Zampini ierr = MatDuplicate(A,MAT_COPY_VALUES,newmat);CHKERRQ(ierr); 331749735bf3SStefano Zampini } else if (reuse == MAT_REUSE_MATRIX) { 331849735bf3SStefano Zampini ierr = MatCopy(A,*newmat,SAME_NONZERO_PATTERN);CHKERRQ(ierr); 331949735bf3SStefano Zampini } 332049735bf3SStefano Zampini B = *newmat; 332149735bf3SStefano Zampini 332234136279SStefano Zampini ierr = PetscFree(B->defaultvectype);CHKERRQ(ierr); 332334136279SStefano Zampini ierr = PetscStrallocpy(VECCUDA,&B->defaultvectype);CHKERRQ(ierr); 332434136279SStefano Zampini 332549735bf3SStefano Zampini if (reuse != MAT_REUSE_MATRIX && !B->spptr) { 33269ae82921SPaul Mullowney if (B->factortype == MAT_FACTOR_NONE) { 3327e6e9a74fSStefano Zampini Mat_SeqAIJCUSPARSE *spptr; 3328e6e9a74fSStefano Zampini ierr = PetscNew(&spptr);CHKERRQ(ierr); 3329e6e9a74fSStefano Zampini stat = cusparseCreate(&spptr->handle);CHKERRCUSPARSE(stat); 3330a0e72f99SJunchao Zhang stat = cusparseSetStream(spptr->handle,PetscDefaultCudaStream);CHKERRCUSPARSE(stat); 33311a2c6b5cSJunchao Zhang spptr->format = MAT_CUSPARSE_CSR; 3332d8132acaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3333d8132acaSStefano Zampini spptr->spmvAlg = CUSPARSE_CSRMV_ALG1; /* default, since we only support csr */ 3334d8132acaSStefano Zampini spptr->spmmAlg = CUSPARSE_SPMM_CSR_ALG1; /* default, only support column-major dense matrix B */ 3335d8132acaSStefano Zampini spptr->csr2cscAlg = CUSPARSE_CSR2CSC_ALG1; 3336d8132acaSStefano Zampini #endif 33371a2c6b5cSJunchao Zhang B->spptr = spptr; 33389ae82921SPaul Mullowney } else { 3339e6e9a74fSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *spptr; 3340e6e9a74fSStefano Zampini 3341e6e9a74fSStefano Zampini ierr = PetscNew(&spptr);CHKERRQ(ierr); 3342e6e9a74fSStefano Zampini stat = cusparseCreate(&spptr->handle);CHKERRCUSPARSE(stat); 3343a0e72f99SJunchao Zhang stat = cusparseSetStream(spptr->handle,PetscDefaultCudaStream);CHKERRCUSPARSE(stat); 3344e6e9a74fSStefano Zampini B->spptr = spptr; 33459ae82921SPaul Mullowney } 3346e6e9a74fSStefano Zampini B->offloadmask = PETSC_OFFLOAD_UNALLOCATED; 334749735bf3SStefano Zampini } 3348693b0035SStefano Zampini B->ops->assemblyend = MatAssemblyEnd_SeqAIJCUSPARSE; 33499ae82921SPaul Mullowney B->ops->destroy = MatDestroy_SeqAIJCUSPARSE; 33501a2c6b5cSJunchao Zhang B->ops->setoption = MatSetOption_SeqAIJCUSPARSE; 33519ae82921SPaul Mullowney B->ops->setfromoptions = MatSetFromOptions_SeqAIJCUSPARSE; 335295639643SRichard Tran Mills B->ops->bindtocpu = MatBindToCPU_SeqAIJCUSPARSE; 3353693b0035SStefano Zampini B->ops->duplicate = MatDuplicate_SeqAIJCUSPARSE; 33542205254eSKarl Rupp 3355e6e9a74fSStefano Zampini ierr = MatBindToCPU_SeqAIJCUSPARSE(B,PETSC_FALSE);CHKERRQ(ierr); 33569ae82921SPaul Mullowney ierr = PetscObjectChangeTypeName((PetscObject)B,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 3357bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatCUSPARSESetFormat_C",MatCUSPARSESetFormat_SeqAIJCUSPARSE);CHKERRQ(ierr); 33589ae82921SPaul Mullowney PetscFunctionReturn(0); 33599ae82921SPaul Mullowney } 33609ae82921SPaul Mullowney 336102fe1965SBarry Smith PETSC_EXTERN PetscErrorCode MatCreate_SeqAIJCUSPARSE(Mat B) 336202fe1965SBarry Smith { 336302fe1965SBarry Smith PetscErrorCode ierr; 336402fe1965SBarry Smith 336502fe1965SBarry Smith PetscFunctionBegin; 336602fe1965SBarry Smith ierr = MatCreate_SeqAIJ(B);CHKERRQ(ierr); 33670ce8acdeSStefano Zampini ierr = MatConvert_SeqAIJ_SeqAIJCUSPARSE(B,MATSEQAIJCUSPARSE,MAT_INPLACE_MATRIX,&B);CHKERRQ(ierr); 336802fe1965SBarry Smith PetscFunctionReturn(0); 336902fe1965SBarry Smith } 337002fe1965SBarry Smith 33713ca39a21SBarry Smith /*MC 3372e057df02SPaul Mullowney MATSEQAIJCUSPARSE - MATAIJCUSPARSE = "(seq)aijcusparse" - A matrix type to be used for sparse matrices. 3373e057df02SPaul Mullowney 3374e057df02SPaul Mullowney A matrix type type whose data resides on Nvidia GPUs. These matrices can be in either 33752692e278SPaul Mullowney CSR, ELL, or Hybrid format. The ELL and HYB formats require CUDA 4.2 or later. 33762692e278SPaul Mullowney All matrix calculations are performed on Nvidia GPUs using the CUSPARSE library. 3377e057df02SPaul Mullowney 3378e057df02SPaul Mullowney Options Database Keys: 3379e057df02SPaul Mullowney + -mat_type aijcusparse - sets the matrix type to "seqaijcusparse" during a call to MatSetFromOptions() 3380aa372e3fSPaul Mullowney . -mat_cusparse_storage_format csr - sets the storage format of matrices (for MatMult and factors in MatSolve) during a call to MatSetFromOptions(). Other options include ell (ellpack) or hyb (hybrid). 3381a2b725a8SWilliam Gropp - -mat_cusparse_mult_storage_format csr - sets the storage format of matrices (for MatMult) during a call to MatSetFromOptions(). Other options include ell (ellpack) or hyb (hybrid). 3382e057df02SPaul Mullowney 3383e057df02SPaul Mullowney Level: beginner 3384e057df02SPaul Mullowney 33858468deeeSKarl Rupp .seealso: MatCreateSeqAIJCUSPARSE(), MATAIJCUSPARSE, MatCreateAIJCUSPARSE(), MatCUSPARSESetFormat(), MatCUSPARSEStorageFormat, MatCUSPARSEFormatOperation 3386e057df02SPaul Mullowney M*/ 33877f756511SDominic Meiser 3388bddcd29dSMark Adams PETSC_EXTERN PetscErrorCode MatGetFactor_seqaijcusparse_cusparse_band(Mat,MatFactorType,Mat*); 33890f39cd5aSBarry Smith 33903ca39a21SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_CUSPARSE(void) 339142c9c57cSBarry Smith { 339242c9c57cSBarry Smith PetscErrorCode ierr; 339342c9c57cSBarry Smith 339442c9c57cSBarry Smith PetscFunctionBegin; 3395bddcd29dSMark Adams ierr = MatSolverTypeRegister(MATSOLVERCUSPARSEBAND, MATSEQAIJ, MAT_FACTOR_LU,MatGetFactor_seqaijcusparse_cusparse_band);CHKERRQ(ierr); 33963ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_LU,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 33973ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_CHOLESKY,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 33983ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_ILU,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 33993ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_ICC,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 3400bddcd29dSMark Adams 340142c9c57cSBarry Smith PetscFunctionReturn(0); 340242c9c57cSBarry Smith } 340329b38603SBarry Smith 3404470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSE_Destroy(Mat_SeqAIJCUSPARSE **cusparsestruct) 34057f756511SDominic Meiser { 3406e6e9a74fSStefano Zampini PetscErrorCode ierr; 34077f756511SDominic Meiser cusparseStatus_t stat; 34087f756511SDominic Meiser 34097f756511SDominic Meiser PetscFunctionBegin; 34107f756511SDominic Meiser if (*cusparsestruct) { 3411e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*cusparsestruct)->mat,(*cusparsestruct)->format);CHKERRQ(ierr); 3412e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*cusparsestruct)->matTranspose,(*cusparsestruct)->format);CHKERRQ(ierr); 34137f756511SDominic Meiser delete (*cusparsestruct)->workVector; 341481902715SJunchao Zhang delete (*cusparsestruct)->rowoffsets_gpu; 34157e8381f9SStefano Zampini delete (*cusparsestruct)->cooPerm; 34167e8381f9SStefano Zampini delete (*cusparsestruct)->cooPerm_a; 3417a49f1ed0SStefano Zampini delete (*cusparsestruct)->csr2csc_i; 34187e8381f9SStefano Zampini if ((*cusparsestruct)->handle) {stat = cusparseDestroy((*cusparsestruct)->handle);CHKERRCUSPARSE(stat);} 3419e6e9a74fSStefano Zampini ierr = PetscFree(*cusparsestruct);CHKERRQ(ierr); 34207f756511SDominic Meiser } 34217f756511SDominic Meiser PetscFunctionReturn(0); 34227f756511SDominic Meiser } 34237f756511SDominic Meiser 34247f756511SDominic Meiser static PetscErrorCode CsrMatrix_Destroy(CsrMatrix **mat) 34257f756511SDominic Meiser { 34267f756511SDominic Meiser PetscFunctionBegin; 34277f756511SDominic Meiser if (*mat) { 34287f756511SDominic Meiser delete (*mat)->values; 34297f756511SDominic Meiser delete (*mat)->column_indices; 34307f756511SDominic Meiser delete (*mat)->row_offsets; 34317f756511SDominic Meiser delete *mat; 34327f756511SDominic Meiser *mat = 0; 34337f756511SDominic Meiser } 34347f756511SDominic Meiser PetscFunctionReturn(0); 34357f756511SDominic Meiser } 34367f756511SDominic Meiser 3437470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSETriFactorStruct **trifactor) 34387f756511SDominic Meiser { 34397f756511SDominic Meiser cusparseStatus_t stat; 34407f756511SDominic Meiser PetscErrorCode ierr; 34417f756511SDominic Meiser 34427f756511SDominic Meiser PetscFunctionBegin; 34437f756511SDominic Meiser if (*trifactor) { 344457d48284SJunchao Zhang if ((*trifactor)->descr) { stat = cusparseDestroyMatDescr((*trifactor)->descr);CHKERRCUSPARSE(stat); } 3445afb2bd1cSJunchao Zhang if ((*trifactor)->solveInfo) { stat = cusparse_destroy_analysis_info((*trifactor)->solveInfo);CHKERRCUSPARSE(stat); } 34467f756511SDominic Meiser ierr = CsrMatrix_Destroy(&(*trifactor)->csrMat);CHKERRQ(ierr); 34471b0a6780SStefano Zampini if ((*trifactor)->solveBuffer) {cudaError_t cerr = cudaFree((*trifactor)->solveBuffer);CHKERRCUDA(cerr);} 34482cbc15d9SMark if ((*trifactor)->AA_h) {cudaError_t cerr = cudaFreeHost((*trifactor)->AA_h);CHKERRCUDA(cerr);} 3449afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 34501b0a6780SStefano Zampini if ((*trifactor)->csr2cscBuffer) {cudaError_t cerr = cudaFree((*trifactor)->csr2cscBuffer);CHKERRCUDA(cerr);} 3451afb2bd1cSJunchao Zhang #endif 3452da79fbbcSStefano Zampini ierr = PetscFree(*trifactor);CHKERRQ(ierr); 34537f756511SDominic Meiser } 34547f756511SDominic Meiser PetscFunctionReturn(0); 34557f756511SDominic Meiser } 34567f756511SDominic Meiser 3457470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSEMultStruct **matstruct,MatCUSPARSEStorageFormat format) 34587f756511SDominic Meiser { 34597f756511SDominic Meiser CsrMatrix *mat; 34607f756511SDominic Meiser cusparseStatus_t stat; 34617f756511SDominic Meiser cudaError_t err; 34627f756511SDominic Meiser 34637f756511SDominic Meiser PetscFunctionBegin; 34647f756511SDominic Meiser if (*matstruct) { 34657f756511SDominic Meiser if ((*matstruct)->mat) { 34667f756511SDominic Meiser if (format==MAT_CUSPARSE_ELL || format==MAT_CUSPARSE_HYB) { 3467afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3468afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 3469afb2bd1cSJunchao Zhang #else 34707f756511SDominic Meiser cusparseHybMat_t hybMat = (cusparseHybMat_t)(*matstruct)->mat; 347157d48284SJunchao Zhang stat = cusparseDestroyHybMat(hybMat);CHKERRCUSPARSE(stat); 3472afb2bd1cSJunchao Zhang #endif 34737f756511SDominic Meiser } else { 34747f756511SDominic Meiser mat = (CsrMatrix*)(*matstruct)->mat; 34757f756511SDominic Meiser CsrMatrix_Destroy(&mat); 34767f756511SDominic Meiser } 34777f756511SDominic Meiser } 347857d48284SJunchao Zhang if ((*matstruct)->descr) { stat = cusparseDestroyMatDescr((*matstruct)->descr);CHKERRCUSPARSE(stat); } 34797f756511SDominic Meiser delete (*matstruct)->cprowIndices; 3480afb2bd1cSJunchao Zhang if ((*matstruct)->alpha_one) { err=cudaFree((*matstruct)->alpha_one);CHKERRCUDA(err); } 34817656d835SStefano Zampini if ((*matstruct)->beta_zero) { err=cudaFree((*matstruct)->beta_zero);CHKERRCUDA(err); } 34827656d835SStefano Zampini if ((*matstruct)->beta_one) { err=cudaFree((*matstruct)->beta_one);CHKERRCUDA(err); } 3483afb2bd1cSJunchao Zhang 3484afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3485afb2bd1cSJunchao Zhang Mat_SeqAIJCUSPARSEMultStruct *mdata = *matstruct; 3486afb2bd1cSJunchao Zhang if (mdata->matDescr) {stat = cusparseDestroySpMat(mdata->matDescr);CHKERRCUSPARSE(stat);} 3487afb2bd1cSJunchao Zhang for (int i=0; i<3; i++) { 3488afb2bd1cSJunchao Zhang if (mdata->cuSpMV[i].initialized) { 3489afb2bd1cSJunchao Zhang err = cudaFree(mdata->cuSpMV[i].spmvBuffer);CHKERRCUDA(err); 3490afb2bd1cSJunchao Zhang stat = cusparseDestroyDnVec(mdata->cuSpMV[i].vecXDescr);CHKERRCUSPARSE(stat); 3491afb2bd1cSJunchao Zhang stat = cusparseDestroyDnVec(mdata->cuSpMV[i].vecYDescr);CHKERRCUSPARSE(stat); 3492afb2bd1cSJunchao Zhang } 3493afb2bd1cSJunchao Zhang } 3494afb2bd1cSJunchao Zhang #endif 34957f756511SDominic Meiser delete *matstruct; 34967e8381f9SStefano Zampini *matstruct = NULL; 34977f756511SDominic Meiser } 34987f756511SDominic Meiser PetscFunctionReturn(0); 34997f756511SDominic Meiser } 35007f756511SDominic Meiser 3501e8d2b73aSMark Adams PetscErrorCode MatSeqAIJCUSPARSETriFactors_Reset(Mat_SeqAIJCUSPARSETriFactors_p* trifactors) 35027f756511SDominic Meiser { 3503e6e9a74fSStefano Zampini PetscErrorCode ierr; 3504e6e9a74fSStefano Zampini 35057f756511SDominic Meiser PetscFunctionBegin; 35067f756511SDominic Meiser if (*trifactors) { 3507e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->loTriFactorPtr);CHKERRQ(ierr); 3508e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->upTriFactorPtr);CHKERRQ(ierr); 3509e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->loTriFactorPtrTranspose);CHKERRQ(ierr); 3510e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->upTriFactorPtrTranspose);CHKERRQ(ierr); 35117f756511SDominic Meiser delete (*trifactors)->rpermIndices; 35127f756511SDominic Meiser delete (*trifactors)->cpermIndices; 35137f756511SDominic Meiser delete (*trifactors)->workVector; 35147e8381f9SStefano Zampini (*trifactors)->rpermIndices = NULL; 35157e8381f9SStefano Zampini (*trifactors)->cpermIndices = NULL; 35167e8381f9SStefano Zampini (*trifactors)->workVector = NULL; 3517bddcd29dSMark Adams if ((*trifactors)->a_band_d) {cudaError_t cerr = cudaFree((*trifactors)->a_band_d);CHKERRCUDA(cerr);} 3518bddcd29dSMark Adams if ((*trifactors)->i_band_d) {cudaError_t cerr = cudaFree((*trifactors)->i_band_d);CHKERRCUDA(cerr);} 3519e8d2b73aSMark Adams (*trifactors)->init_dev_prop = PETSC_FALSE; 3520ccdfe979SStefano Zampini } 3521ccdfe979SStefano Zampini PetscFunctionReturn(0); 3522ccdfe979SStefano Zampini } 3523ccdfe979SStefano Zampini 3524ccdfe979SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSETriFactors_Destroy(Mat_SeqAIJCUSPARSETriFactors** trifactors) 3525ccdfe979SStefano Zampini { 3526e6e9a74fSStefano Zampini PetscErrorCode ierr; 3527ccdfe979SStefano Zampini cusparseHandle_t handle; 3528ccdfe979SStefano Zampini cusparseStatus_t stat; 3529ccdfe979SStefano Zampini 3530ccdfe979SStefano Zampini PetscFunctionBegin; 3531ccdfe979SStefano Zampini if (*trifactors) { 3532e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(trifactors);CHKERRQ(ierr); 35337f756511SDominic Meiser if (handle = (*trifactors)->handle) { 353457d48284SJunchao Zhang stat = cusparseDestroy(handle);CHKERRCUSPARSE(stat); 35357f756511SDominic Meiser } 3536e6e9a74fSStefano Zampini ierr = PetscFree(*trifactors);CHKERRQ(ierr); 35377f756511SDominic Meiser } 35387f756511SDominic Meiser PetscFunctionReturn(0); 35397f756511SDominic Meiser } 35407e8381f9SStefano Zampini 35417e8381f9SStefano Zampini struct IJCompare 35427e8381f9SStefano Zampini { 35437e8381f9SStefano Zampini __host__ __device__ 35447e8381f9SStefano Zampini inline bool operator() (const thrust::tuple<PetscInt, PetscInt> &t1, const thrust::tuple<PetscInt, PetscInt> &t2) 35457e8381f9SStefano Zampini { 35467e8381f9SStefano Zampini if (t1.get<0>() < t2.get<0>()) return true; 35477e8381f9SStefano Zampini if (t1.get<0>() == t2.get<0>()) return t1.get<1>() < t2.get<1>(); 35487e8381f9SStefano Zampini return false; 35497e8381f9SStefano Zampini } 35507e8381f9SStefano Zampini }; 35517e8381f9SStefano Zampini 35527e8381f9SStefano Zampini struct IJEqual 35537e8381f9SStefano Zampini { 35547e8381f9SStefano Zampini __host__ __device__ 35557e8381f9SStefano Zampini inline bool operator() (const thrust::tuple<PetscInt, PetscInt> &t1, const thrust::tuple<PetscInt, PetscInt> &t2) 35567e8381f9SStefano Zampini { 35577e8381f9SStefano Zampini if (t1.get<0>() != t2.get<0>() || t1.get<1>() != t2.get<1>()) return false; 35587e8381f9SStefano Zampini return true; 35597e8381f9SStefano Zampini } 35607e8381f9SStefano Zampini }; 35617e8381f9SStefano Zampini 35627e8381f9SStefano Zampini struct IJDiff 35637e8381f9SStefano Zampini { 35647e8381f9SStefano Zampini __host__ __device__ 35657e8381f9SStefano Zampini inline PetscInt operator() (const PetscInt &t1, const PetscInt &t2) 35667e8381f9SStefano Zampini { 35677e8381f9SStefano Zampini return t1 == t2 ? 0 : 1; 35687e8381f9SStefano Zampini } 35697e8381f9SStefano Zampini }; 35707e8381f9SStefano Zampini 35717e8381f9SStefano Zampini struct IJSum 35727e8381f9SStefano Zampini { 35737e8381f9SStefano Zampini __host__ __device__ 35747e8381f9SStefano Zampini inline PetscInt operator() (const PetscInt &t1, const PetscInt &t2) 35757e8381f9SStefano Zampini { 35767e8381f9SStefano Zampini return t1||t2; 35777e8381f9SStefano Zampini } 35787e8381f9SStefano Zampini }; 35797e8381f9SStefano Zampini 35807e8381f9SStefano Zampini #include <thrust/iterator/discard_iterator.h> 3581e61fc153SStefano Zampini PetscErrorCode MatSetValuesCOO_SeqAIJCUSPARSE(Mat A, const PetscScalar v[], InsertMode imode) 35827e8381f9SStefano Zampini { 35837e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3584fcdce8c4SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 3585bfcc3627SStefano Zampini THRUSTARRAY *cooPerm_v = NULL; 358608391a17SStefano Zampini thrust::device_ptr<const PetscScalar> d_v; 35877e8381f9SStefano Zampini CsrMatrix *matrix; 35887e8381f9SStefano Zampini PetscErrorCode ierr; 35897e8381f9SStefano Zampini PetscInt n; 35907e8381f9SStefano Zampini 35917e8381f9SStefano Zampini PetscFunctionBegin; 35927e8381f9SStefano Zampini if (!cusp) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUSPARSE struct"); 35937e8381f9SStefano Zampini if (!cusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUSPARSE CsrMatrix"); 35947e8381f9SStefano Zampini if (!cusp->cooPerm) { 35957e8381f9SStefano Zampini ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 35967e8381f9SStefano Zampini ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 35977e8381f9SStefano Zampini PetscFunctionReturn(0); 35987e8381f9SStefano Zampini } 35997e8381f9SStefano Zampini matrix = (CsrMatrix*)cusp->mat->mat; 36007e8381f9SStefano Zampini if (!matrix->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 3601e61fc153SStefano Zampini if (!v) { 3602e61fc153SStefano Zampini if (imode == INSERT_VALUES) thrust::fill(thrust::device,matrix->values->begin(),matrix->values->end(),0.); 3603e61fc153SStefano Zampini goto finalize; 36047e8381f9SStefano Zampini } 3605e61fc153SStefano Zampini n = cusp->cooPerm->size(); 360608391a17SStefano Zampini if (isCudaMem(v)) { 360708391a17SStefano Zampini d_v = thrust::device_pointer_cast(v); 360808391a17SStefano Zampini } else { 3609e61fc153SStefano Zampini cooPerm_v = new THRUSTARRAY(n); 3610e61fc153SStefano Zampini cooPerm_v->assign(v,v+n); 361108391a17SStefano Zampini d_v = cooPerm_v->data(); 3612e61fc153SStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscScalar));CHKERRQ(ierr); 361308391a17SStefano Zampini } 3614bfcc3627SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3615e61fc153SStefano Zampini if (imode == ADD_VALUES) { /* ADD VALUES means add to existing ones */ 36167e8381f9SStefano Zampini if (cusp->cooPerm_a) { 3617bfcc3627SStefano Zampini THRUSTARRAY *cooPerm_w = new THRUSTARRAY(matrix->values->size()); 361808391a17SStefano Zampini auto vbit = thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()); 3619e61fc153SStefano Zampini thrust::reduce_by_key(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),vbit,thrust::make_discard_iterator(),cooPerm_w->begin(),thrust::equal_to<PetscInt>(),thrust::plus<PetscScalar>()); 3620e61fc153SStefano Zampini thrust::transform(cooPerm_w->begin(),cooPerm_w->end(),matrix->values->begin(),matrix->values->begin(),thrust::plus<PetscScalar>()); 3621e61fc153SStefano Zampini delete cooPerm_w; 36227e8381f9SStefano Zampini } else { 362308391a17SStefano Zampini auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()), 36247e8381f9SStefano Zampini matrix->values->begin())); 362508391a17SStefano Zampini auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->end()), 36267e8381f9SStefano Zampini matrix->values->end())); 36277e8381f9SStefano Zampini thrust::for_each(zibit,zieit,VecCUDAPlusEquals()); 36287e8381f9SStefano Zampini } 36297e8381f9SStefano Zampini } else { 3630e61fc153SStefano Zampini if (cusp->cooPerm_a) { /* repeated entries in COO, with INSERT_VALUES -> reduce */ 363108391a17SStefano Zampini auto vbit = thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()); 3632e61fc153SStefano Zampini thrust::reduce_by_key(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),vbit,thrust::make_discard_iterator(),matrix->values->begin(),thrust::equal_to<PetscInt>(),thrust::plus<PetscScalar>()); 36337e8381f9SStefano Zampini } else { 363408391a17SStefano Zampini auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()), 36357e8381f9SStefano Zampini matrix->values->begin())); 363608391a17SStefano Zampini auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->end()), 36377e8381f9SStefano Zampini matrix->values->end())); 36387e8381f9SStefano Zampini thrust::for_each(zibit,zieit,VecCUDAEquals()); 36397e8381f9SStefano Zampini } 36407e8381f9SStefano Zampini } 3641bfcc3627SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3642e61fc153SStefano Zampini finalize: 3643e61fc153SStefano Zampini delete cooPerm_v; 36447e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 3645e61fc153SStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr); 3646fcdce8c4SStefano Zampini /* shorter version of MatAssemblyEnd_SeqAIJ */ 3647fcdce8c4SStefano Zampini ierr = PetscInfo3(A,"Matrix size: %D X %D; storage space: 0 unneeded,%D used\n",A->rmap->n,A->cmap->n,a->nz);CHKERRQ(ierr); 3648fcdce8c4SStefano Zampini ierr = PetscInfo(A,"Number of mallocs during MatSetValues() is 0\n");CHKERRQ(ierr); 3649fcdce8c4SStefano Zampini ierr = PetscInfo1(A,"Maximum nonzeros in any row is %D\n",a->rmax);CHKERRQ(ierr); 3650fcdce8c4SStefano Zampini a->reallocs = 0; 3651fcdce8c4SStefano Zampini A->info.mallocs += 0; 3652fcdce8c4SStefano Zampini A->info.nz_unneeded = 0; 3653fcdce8c4SStefano Zampini A->assembled = A->was_assembled = PETSC_TRUE; 3654fcdce8c4SStefano Zampini A->num_ass++; 36557e8381f9SStefano Zampini PetscFunctionReturn(0); 36567e8381f9SStefano Zampini } 36577e8381f9SStefano Zampini 3658a49f1ed0SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEInvalidateTranspose(Mat A, PetscBool destroy) 3659a49f1ed0SStefano Zampini { 3660a49f1ed0SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3661a49f1ed0SStefano Zampini PetscErrorCode ierr; 3662a49f1ed0SStefano Zampini 3663a49f1ed0SStefano Zampini PetscFunctionBegin; 3664a49f1ed0SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3665a49f1ed0SStefano Zampini if (!cusp) PetscFunctionReturn(0); 3666a49f1ed0SStefano Zampini if (destroy) { 3667a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&cusp->matTranspose,cusp->format);CHKERRQ(ierr); 3668a49f1ed0SStefano Zampini delete cusp->csr2csc_i; 3669a49f1ed0SStefano Zampini cusp->csr2csc_i = NULL; 3670a49f1ed0SStefano Zampini } 36711a2c6b5cSJunchao Zhang A->transupdated = PETSC_FALSE; 3672a49f1ed0SStefano Zampini PetscFunctionReturn(0); 3673a49f1ed0SStefano Zampini } 3674a49f1ed0SStefano Zampini 36757e8381f9SStefano Zampini #include <thrust/binary_search.h> 3676e61fc153SStefano Zampini PetscErrorCode MatSetPreallocationCOO_SeqAIJCUSPARSE(Mat A, PetscInt n, const PetscInt coo_i[], const PetscInt coo_j[]) 36777e8381f9SStefano Zampini { 36787e8381f9SStefano Zampini PetscErrorCode ierr; 36797e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 36807e8381f9SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 36817e8381f9SStefano Zampini PetscInt cooPerm_n, nzr = 0; 36827e8381f9SStefano Zampini cudaError_t cerr; 36837e8381f9SStefano Zampini 36847e8381f9SStefano Zampini PetscFunctionBegin; 36857e8381f9SStefano Zampini ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr); 36867e8381f9SStefano Zampini ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr); 36877e8381f9SStefano Zampini cooPerm_n = cusp->cooPerm ? cusp->cooPerm->size() : 0; 36887e8381f9SStefano Zampini if (n != cooPerm_n) { 36897e8381f9SStefano Zampini delete cusp->cooPerm; 36907e8381f9SStefano Zampini delete cusp->cooPerm_a; 36917e8381f9SStefano Zampini cusp->cooPerm = NULL; 36927e8381f9SStefano Zampini cusp->cooPerm_a = NULL; 36937e8381f9SStefano Zampini } 36947e8381f9SStefano Zampini if (n) { 36957e8381f9SStefano Zampini THRUSTINTARRAY d_i(n); 36967e8381f9SStefano Zampini THRUSTINTARRAY d_j(n); 36977e8381f9SStefano Zampini THRUSTINTARRAY ii(A->rmap->n); 36987e8381f9SStefano Zampini 36997e8381f9SStefano Zampini if (!cusp->cooPerm) { cusp->cooPerm = new THRUSTINTARRAY(n); } 37007e8381f9SStefano Zampini if (!cusp->cooPerm_a) { cusp->cooPerm_a = new THRUSTINTARRAY(n); } 37017e8381f9SStefano Zampini 37027e8381f9SStefano Zampini ierr = PetscLogCpuToGpu(2.*n*sizeof(PetscInt));CHKERRQ(ierr); 37037e8381f9SStefano Zampini d_i.assign(coo_i,coo_i+n); 37047e8381f9SStefano Zampini d_j.assign(coo_j,coo_j+n); 37057e8381f9SStefano Zampini auto fkey = thrust::make_zip_iterator(thrust::make_tuple(d_i.begin(),d_j.begin())); 37067e8381f9SStefano Zampini auto ekey = thrust::make_zip_iterator(thrust::make_tuple(d_i.end(),d_j.end())); 37077e8381f9SStefano Zampini 370808391a17SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 37097e8381f9SStefano Zampini thrust::sequence(thrust::device, cusp->cooPerm->begin(), cusp->cooPerm->end(), 0); 37107e8381f9SStefano Zampini thrust::sort_by_key(fkey, ekey, cusp->cooPerm->begin(), IJCompare()); 37117e8381f9SStefano Zampini *cusp->cooPerm_a = d_i; 37127e8381f9SStefano Zampini THRUSTINTARRAY w = d_j; 37137e8381f9SStefano Zampini 37147e8381f9SStefano Zampini auto nekey = thrust::unique(fkey, ekey, IJEqual()); 37157e8381f9SStefano Zampini if (nekey == ekey) { /* all entries are unique */ 37167e8381f9SStefano Zampini delete cusp->cooPerm_a; 37177e8381f9SStefano Zampini cusp->cooPerm_a = NULL; 37187e8381f9SStefano Zampini } else { /* I couldn't come up with a more elegant algorithm */ 37197e8381f9SStefano Zampini adjacent_difference(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),cusp->cooPerm_a->begin(),IJDiff()); 37207e8381f9SStefano Zampini adjacent_difference(w.begin(),w.end(),w.begin(),IJDiff()); 37217e8381f9SStefano Zampini (*cusp->cooPerm_a)[0] = 0; 37227e8381f9SStefano Zampini w[0] = 0; 37237e8381f9SStefano Zampini thrust::transform(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),w.begin(),cusp->cooPerm_a->begin(),IJSum()); 37247e8381f9SStefano Zampini thrust::inclusive_scan(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),cusp->cooPerm_a->begin(),thrust::plus<PetscInt>()); 37257e8381f9SStefano Zampini } 37267e8381f9SStefano Zampini thrust::counting_iterator<PetscInt> search_begin(0); 37277e8381f9SStefano Zampini thrust::upper_bound(d_i.begin(), nekey.get_iterator_tuple().get<0>(), 37287e8381f9SStefano Zampini search_begin, search_begin + A->rmap->n, 37297e8381f9SStefano Zampini ii.begin()); 373008391a17SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 37317e8381f9SStefano Zampini 37327e8381f9SStefano Zampini ierr = MatSeqXAIJFreeAIJ(A,&a->a,&a->j,&a->i);CHKERRQ(ierr); 37337e8381f9SStefano Zampini a->singlemalloc = PETSC_FALSE; 37347e8381f9SStefano Zampini a->free_a = PETSC_TRUE; 37357e8381f9SStefano Zampini a->free_ij = PETSC_TRUE; 37367e8381f9SStefano Zampini ierr = PetscMalloc1(A->rmap->n+1,&a->i);CHKERRQ(ierr); 37377e8381f9SStefano Zampini a->i[0] = 0; 37387e8381f9SStefano Zampini cerr = cudaMemcpy(a->i+1,ii.data().get(),A->rmap->n*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 37397e8381f9SStefano Zampini a->nz = a->maxnz = a->i[A->rmap->n]; 3740fcdce8c4SStefano Zampini a->rmax = 0; 37417e8381f9SStefano Zampini ierr = PetscMalloc1(a->nz,&a->a);CHKERRQ(ierr); 37427e8381f9SStefano Zampini ierr = PetscMalloc1(a->nz,&a->j);CHKERRQ(ierr); 37437e8381f9SStefano Zampini cerr = cudaMemcpy(a->j,d_j.data().get(),a->nz*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 37447e8381f9SStefano Zampini if (!a->ilen) { ierr = PetscMalloc1(A->rmap->n,&a->ilen);CHKERRQ(ierr); } 37457e8381f9SStefano Zampini if (!a->imax) { ierr = PetscMalloc1(A->rmap->n,&a->imax);CHKERRQ(ierr); } 37467e8381f9SStefano Zampini for (PetscInt i = 0; i < A->rmap->n; i++) { 37477e8381f9SStefano Zampini const PetscInt nnzr = a->i[i+1] - a->i[i]; 37487e8381f9SStefano Zampini nzr += (PetscInt)!!(nnzr); 37497e8381f9SStefano Zampini a->ilen[i] = a->imax[i] = nnzr; 3750fcdce8c4SStefano Zampini a->rmax = PetscMax(a->rmax,nnzr); 37517e8381f9SStefano Zampini } 3752fcdce8c4SStefano Zampini a->nonzerorowcnt = nzr; 37537e8381f9SStefano Zampini A->preallocated = PETSC_TRUE; 37547e8381f9SStefano Zampini ierr = PetscLogGpuToCpu((A->rmap->n+a->nz)*sizeof(PetscInt));CHKERRQ(ierr); 3755fcdce8c4SStefano Zampini ierr = MatMarkDiagonal_SeqAIJ(A);CHKERRQ(ierr); 37567e8381f9SStefano Zampini } else { 37577e8381f9SStefano Zampini ierr = MatSeqAIJSetPreallocation(A,0,NULL);CHKERRQ(ierr); 37587e8381f9SStefano Zampini } 3759e61fc153SStefano Zampini ierr = MatSetOption(A,MAT_NEW_NONZERO_ALLOCATION_ERR,PETSC_TRUE);CHKERRQ(ierr); 37607e8381f9SStefano Zampini 37617e8381f9SStefano Zampini /* We want to allocate the CUSPARSE struct for matvec now. 3762e61fc153SStefano Zampini The code is so convoluted now that I prefer to copy zeros */ 3763e61fc153SStefano Zampini ierr = PetscArrayzero(a->a,a->nz);CHKERRQ(ierr); 37647e8381f9SStefano Zampini ierr = MatCheckCompressedRow(A,nzr,&a->compressedrow,a->i,A->rmap->n,0.6);CHKERRQ(ierr); 37657e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_CPU; 37667e8381f9SStefano Zampini A->nonzerostate++; 37677e8381f9SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 3768a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr); 37697e8381f9SStefano Zampini 37707e8381f9SStefano Zampini A->assembled = PETSC_FALSE; 37717e8381f9SStefano Zampini A->was_assembled = PETSC_FALSE; 37727e8381f9SStefano Zampini PetscFunctionReturn(0); 37737e8381f9SStefano Zampini } 3774ed502f03SStefano Zampini 3775ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetArrayRead(Mat A, const PetscScalar** a) 3776ed502f03SStefano Zampini { 3777ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3778ed502f03SStefano Zampini CsrMatrix *csr; 3779ed502f03SStefano Zampini PetscErrorCode ierr; 3780ed502f03SStefano Zampini 3781ed502f03SStefano Zampini PetscFunctionBegin; 3782ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3783ed502f03SStefano Zampini PetscValidPointer(a,2); 3784ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3785ed502f03SStefano Zampini if (cusp->format == MAT_CUSPARSE_ELL || cusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 3786ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 378733c9ba73SStefano Zampini if (!cusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 3788ed502f03SStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 3789ed502f03SStefano Zampini if (!csr->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 3790ed502f03SStefano Zampini *a = csr->values->data().get(); 3791ed502f03SStefano Zampini PetscFunctionReturn(0); 3792ed502f03SStefano Zampini } 3793ed502f03SStefano Zampini 3794ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreArrayRead(Mat A, const PetscScalar** a) 3795ed502f03SStefano Zampini { 3796ed502f03SStefano Zampini PetscFunctionBegin; 3797ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3798ed502f03SStefano Zampini PetscValidPointer(a,2); 3799ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3800ed502f03SStefano Zampini *a = NULL; 3801ed502f03SStefano Zampini PetscFunctionReturn(0); 3802ed502f03SStefano Zampini } 3803ed502f03SStefano Zampini 3804039c6fbaSStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetArray(Mat A, PetscScalar** a) 3805039c6fbaSStefano Zampini { 3806039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3807039c6fbaSStefano Zampini CsrMatrix *csr; 3808039c6fbaSStefano Zampini PetscErrorCode ierr; 3809039c6fbaSStefano Zampini 3810039c6fbaSStefano Zampini PetscFunctionBegin; 3811039c6fbaSStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3812039c6fbaSStefano Zampini PetscValidPointer(a,2); 3813039c6fbaSStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3814039c6fbaSStefano Zampini if (cusp->format == MAT_CUSPARSE_ELL || cusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 3815039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 381633c9ba73SStefano Zampini if (!cusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 3817039c6fbaSStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 3818039c6fbaSStefano Zampini if (!csr->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 3819039c6fbaSStefano Zampini *a = csr->values->data().get(); 3820039c6fbaSStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 3821a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_FALSE);CHKERRQ(ierr); 3822039c6fbaSStefano Zampini PetscFunctionReturn(0); 3823039c6fbaSStefano Zampini } 3824039c6fbaSStefano Zampini 3825039c6fbaSStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreArray(Mat A, PetscScalar** a) 3826039c6fbaSStefano Zampini { 3827039c6fbaSStefano Zampini PetscErrorCode ierr; 3828039c6fbaSStefano Zampini 3829039c6fbaSStefano Zampini PetscFunctionBegin; 3830039c6fbaSStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3831039c6fbaSStefano Zampini PetscValidPointer(a,2); 3832039c6fbaSStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3833039c6fbaSStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr); 3834039c6fbaSStefano Zampini *a = NULL; 3835039c6fbaSStefano Zampini PetscFunctionReturn(0); 3836039c6fbaSStefano Zampini } 3837039c6fbaSStefano Zampini 3838ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetArrayWrite(Mat A, PetscScalar** a) 3839ed502f03SStefano Zampini { 3840ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3841ed502f03SStefano Zampini CsrMatrix *csr; 3842a49f1ed0SStefano Zampini PetscErrorCode ierr; 3843ed502f03SStefano Zampini 3844ed502f03SStefano Zampini PetscFunctionBegin; 3845ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3846ed502f03SStefano Zampini PetscValidPointer(a,2); 3847ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3848ed502f03SStefano Zampini if (cusp->format == MAT_CUSPARSE_ELL || cusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 384933c9ba73SStefano Zampini if (!cusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 3850ed502f03SStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 3851ed502f03SStefano Zampini if (!csr->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 3852ed502f03SStefano Zampini *a = csr->values->data().get(); 3853039c6fbaSStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 3854a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_FALSE);CHKERRQ(ierr); 3855ed502f03SStefano Zampini PetscFunctionReturn(0); 3856ed502f03SStefano Zampini } 3857ed502f03SStefano Zampini 3858ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreArrayWrite(Mat A, PetscScalar** a) 3859ed502f03SStefano Zampini { 3860ed502f03SStefano Zampini PetscErrorCode ierr; 3861ed502f03SStefano Zampini 3862ed502f03SStefano Zampini PetscFunctionBegin; 3863ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3864ed502f03SStefano Zampini PetscValidPointer(a,2); 3865ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3866ed502f03SStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr); 3867ed502f03SStefano Zampini *a = NULL; 3868ed502f03SStefano Zampini PetscFunctionReturn(0); 3869ed502f03SStefano Zampini } 3870ed502f03SStefano Zampini 3871ed502f03SStefano Zampini struct IJCompare4 3872ed502f03SStefano Zampini { 3873ed502f03SStefano Zampini __host__ __device__ 38742ed87e7eSStefano Zampini inline bool operator() (const thrust::tuple<int, int, PetscScalar, int> &t1, const thrust::tuple<int, int, PetscScalar, int> &t2) 3875ed502f03SStefano Zampini { 3876ed502f03SStefano Zampini if (t1.get<0>() < t2.get<0>()) return true; 3877ed502f03SStefano Zampini if (t1.get<0>() == t2.get<0>()) return t1.get<1>() < t2.get<1>(); 3878ed502f03SStefano Zampini return false; 3879ed502f03SStefano Zampini } 3880ed502f03SStefano Zampini }; 3881ed502f03SStefano Zampini 38828909a122SStefano Zampini struct Shift 38838909a122SStefano Zampini { 3884ed502f03SStefano Zampini int _shift; 3885ed502f03SStefano Zampini 3886ed502f03SStefano Zampini Shift(int shift) : _shift(shift) {} 3887ed502f03SStefano Zampini __host__ __device__ 3888ed502f03SStefano Zampini inline int operator() (const int &c) 3889ed502f03SStefano Zampini { 3890ed502f03SStefano Zampini return c + _shift; 3891ed502f03SStefano Zampini } 3892ed502f03SStefano Zampini }; 3893ed502f03SStefano Zampini 3894ed502f03SStefano Zampini /* merges to SeqAIJCUSPARSE matrices, [A';B']' operation in matlab notation */ 3895ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEMergeMats(Mat A,Mat B,MatReuse reuse,Mat* C) 3896ed502f03SStefano Zampini { 3897ed502f03SStefano Zampini PetscErrorCode ierr; 3898ed502f03SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data, *b = (Mat_SeqAIJ*)B->data, *c; 3899ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr, *Bcusp = (Mat_SeqAIJCUSPARSE*)B->spptr, *Ccusp; 3900ed502f03SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Cmat; 3901ed502f03SStefano Zampini CsrMatrix *Acsr,*Bcsr,*Ccsr; 3902ed502f03SStefano Zampini PetscInt Annz,Bnnz; 3903ed502f03SStefano Zampini cusparseStatus_t stat; 3904ed502f03SStefano Zampini PetscInt i,m,n,zero = 0; 3905ed502f03SStefano Zampini cudaError_t cerr; 3906ed502f03SStefano Zampini 3907ed502f03SStefano Zampini PetscFunctionBegin; 3908ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3909ed502f03SStefano Zampini PetscValidHeaderSpecific(B,MAT_CLASSID,2); 3910ed502f03SStefano Zampini PetscValidPointer(C,4); 3911ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3912ed502f03SStefano Zampini PetscCheckTypeName(B,MATSEQAIJCUSPARSE); 3913ed502f03SStefano Zampini if (A->rmap->n != B->rmap->n) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Invalid number or rows %D != %D",A->rmap->n,B->rmap->n); 3914ed502f03SStefano Zampini if (reuse == MAT_INPLACE_MATRIX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_INPLACE_MATRIX not supported"); 3915ed502f03SStefano Zampini if (Acusp->format == MAT_CUSPARSE_ELL || Acusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 3916ed502f03SStefano Zampini if (Bcusp->format == MAT_CUSPARSE_ELL || Bcusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 3917ed502f03SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 3918ed502f03SStefano Zampini m = A->rmap->n; 3919ed502f03SStefano Zampini n = A->cmap->n + B->cmap->n; 3920ed502f03SStefano Zampini ierr = MatCreate(PETSC_COMM_SELF,C);CHKERRQ(ierr); 3921ed502f03SStefano Zampini ierr = MatSetSizes(*C,m,n,m,n);CHKERRQ(ierr); 3922ed502f03SStefano Zampini ierr = MatSetType(*C,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 3923ed502f03SStefano Zampini c = (Mat_SeqAIJ*)(*C)->data; 3924ed502f03SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)(*C)->spptr; 3925ed502f03SStefano Zampini Cmat = new Mat_SeqAIJCUSPARSEMultStruct; 3926ed502f03SStefano Zampini Ccsr = new CsrMatrix; 3927ed502f03SStefano Zampini Cmat->cprowIndices = NULL; 3928ed502f03SStefano Zampini c->compressedrow.use = PETSC_FALSE; 3929ed502f03SStefano Zampini c->compressedrow.nrows = 0; 3930ed502f03SStefano Zampini c->compressedrow.i = NULL; 3931ed502f03SStefano Zampini c->compressedrow.rindex = NULL; 3932ed502f03SStefano Zampini Ccusp->workVector = NULL; 3933ed502f03SStefano Zampini Ccusp->nrows = m; 3934ed502f03SStefano Zampini Ccusp->mat = Cmat; 3935ed502f03SStefano Zampini Ccusp->mat->mat = Ccsr; 3936ed502f03SStefano Zampini Ccsr->num_rows = m; 3937ed502f03SStefano Zampini Ccsr->num_cols = n; 3938ed502f03SStefano Zampini stat = cusparseCreateMatDescr(&Cmat->descr);CHKERRCUSPARSE(stat); 3939ed502f03SStefano Zampini stat = cusparseSetMatIndexBase(Cmat->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 3940ed502f03SStefano Zampini stat = cusparseSetMatType(Cmat->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 3941ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->alpha_one),sizeof(PetscScalar));CHKERRCUDA(cerr); 3942ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_zero),sizeof(PetscScalar));CHKERRCUDA(cerr); 3943ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_one), sizeof(PetscScalar));CHKERRCUDA(cerr); 3944ed502f03SStefano Zampini cerr = cudaMemcpy(Cmat->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 3945ed502f03SStefano Zampini cerr = cudaMemcpy(Cmat->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 3946ed502f03SStefano Zampini cerr = cudaMemcpy(Cmat->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 3947ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 3948ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 39491a2c6b5cSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTransposeForMult(A);CHKERRQ(ierr); 39501a2c6b5cSJunchao Zhang ierr = MatSeqAIJCUSPARSEFormExplicitTransposeForMult(B);CHKERRQ(ierr); 3951ed502f03SStefano Zampini if (!Acusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 3952ed502f03SStefano Zampini if (!Bcusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 3953ed502f03SStefano Zampini 3954ed502f03SStefano Zampini Acsr = (CsrMatrix*)Acusp->mat->mat; 3955ed502f03SStefano Zampini Bcsr = (CsrMatrix*)Bcusp->mat->mat; 3956ed502f03SStefano Zampini Annz = (PetscInt)Acsr->column_indices->size(); 3957ed502f03SStefano Zampini Bnnz = (PetscInt)Bcsr->column_indices->size(); 3958ed502f03SStefano Zampini c->nz = Annz + Bnnz; 3959ed502f03SStefano Zampini Ccsr->row_offsets = new THRUSTINTARRAY32(m+1); 3960ed502f03SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 3961ed502f03SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 3962ed502f03SStefano Zampini Ccsr->num_entries = c->nz; 3963ed502f03SStefano Zampini Ccusp->cooPerm = new THRUSTINTARRAY(c->nz); 3964ed502f03SStefano Zampini if (c->nz) { 39652ed87e7eSStefano Zampini auto Acoo = new THRUSTINTARRAY32(Annz); 39662ed87e7eSStefano Zampini auto Bcoo = new THRUSTINTARRAY32(Bnnz); 39672ed87e7eSStefano Zampini auto Ccoo = new THRUSTINTARRAY32(c->nz); 39682ed87e7eSStefano Zampini THRUSTINTARRAY32 *Aroff,*Broff; 39692ed87e7eSStefano Zampini 3970ed502f03SStefano Zampini if (a->compressedrow.use) { /* need full row offset */ 3971ed502f03SStefano Zampini if (!Acusp->rowoffsets_gpu) { 3972ed502f03SStefano Zampini Acusp->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n + 1); 3973ed502f03SStefano Zampini Acusp->rowoffsets_gpu->assign(a->i,a->i + A->rmap->n + 1); 3974ed502f03SStefano Zampini ierr = PetscLogCpuToGpu((A->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 3975ed502f03SStefano Zampini } 39762ed87e7eSStefano Zampini Aroff = Acusp->rowoffsets_gpu; 39772ed87e7eSStefano Zampini } else Aroff = Acsr->row_offsets; 3978ed502f03SStefano Zampini if (b->compressedrow.use) { /* need full row offset */ 3979ed502f03SStefano Zampini if (!Bcusp->rowoffsets_gpu) { 3980ed502f03SStefano Zampini Bcusp->rowoffsets_gpu = new THRUSTINTARRAY32(B->rmap->n + 1); 3981ed502f03SStefano Zampini Bcusp->rowoffsets_gpu->assign(b->i,b->i + B->rmap->n + 1); 3982ed502f03SStefano Zampini ierr = PetscLogCpuToGpu((B->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 3983ed502f03SStefano Zampini } 39842ed87e7eSStefano Zampini Broff = Bcusp->rowoffsets_gpu; 39852ed87e7eSStefano Zampini } else Broff = Bcsr->row_offsets; 3986ed502f03SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 39872ed87e7eSStefano Zampini stat = cusparseXcsr2coo(Acusp->handle, 39882ed87e7eSStefano Zampini Aroff->data().get(), 39892ed87e7eSStefano Zampini Annz, 39902ed87e7eSStefano Zampini m, 39912ed87e7eSStefano Zampini Acoo->data().get(), 39922ed87e7eSStefano Zampini CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 3993ed502f03SStefano Zampini stat = cusparseXcsr2coo(Bcusp->handle, 39942ed87e7eSStefano Zampini Broff->data().get(), 3995ed502f03SStefano Zampini Bnnz, 3996ed502f03SStefano Zampini m, 39972ed87e7eSStefano Zampini Bcoo->data().get(), 3998ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 39992ed87e7eSStefano Zampini /* Issues when using bool with large matrices on SUMMIT 10.2.89 */ 40002ed87e7eSStefano Zampini auto Aperm = thrust::make_constant_iterator(1); 40012ed87e7eSStefano Zampini auto Bperm = thrust::make_constant_iterator(0); 40028909a122SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(10,0,0) 4003ed502f03SStefano Zampini auto Bcib = thrust::make_transform_iterator(Bcsr->column_indices->begin(),Shift(A->cmap->n)); 4004ed502f03SStefano Zampini auto Bcie = thrust::make_transform_iterator(Bcsr->column_indices->end(),Shift(A->cmap->n)); 40058909a122SStefano Zampini #else 40068909a122SStefano Zampini /* there are issues instantiating the merge operation using a transform iterator for the columns of B */ 40078909a122SStefano Zampini auto Bcib = Bcsr->column_indices->begin(); 40088909a122SStefano Zampini auto Bcie = Bcsr->column_indices->end(); 40098909a122SStefano Zampini thrust::transform(Bcib,Bcie,Bcib,Shift(A->cmap->n)); 40108909a122SStefano Zampini #endif 40112ed87e7eSStefano Zampini auto wPerm = new THRUSTINTARRAY32(Annz+Bnnz); 40122ed87e7eSStefano Zampini auto Azb = thrust::make_zip_iterator(thrust::make_tuple(Acoo->begin(),Acsr->column_indices->begin(),Acsr->values->begin(),Aperm)); 40132ed87e7eSStefano Zampini auto Aze = thrust::make_zip_iterator(thrust::make_tuple(Acoo->end(),Acsr->column_indices->end(),Acsr->values->end(),Aperm)); 40142ed87e7eSStefano Zampini auto Bzb = thrust::make_zip_iterator(thrust::make_tuple(Bcoo->begin(),Bcib,Bcsr->values->begin(),Bperm)); 40152ed87e7eSStefano Zampini auto Bze = thrust::make_zip_iterator(thrust::make_tuple(Bcoo->end(),Bcie,Bcsr->values->end(),Bperm)); 40162ed87e7eSStefano Zampini auto Czb = thrust::make_zip_iterator(thrust::make_tuple(Ccoo->begin(),Ccsr->column_indices->begin(),Ccsr->values->begin(),wPerm->begin())); 4017ed502f03SStefano Zampini auto p1 = Ccusp->cooPerm->begin(); 4018ed502f03SStefano Zampini auto p2 = Ccusp->cooPerm->begin(); 4019ed502f03SStefano Zampini thrust::advance(p2,Annz); 40202ed87e7eSStefano Zampini PetscStackCallThrust(thrust::merge(thrust::device,Azb,Aze,Bzb,Bze,Czb,IJCompare4())); 40218909a122SStefano Zampini #if PETSC_PKG_CUDA_VERSION_LT(10,0,0) 40228909a122SStefano Zampini thrust::transform(Bcib,Bcie,Bcib,Shift(-A->cmap->n)); 40238909a122SStefano Zampini #endif 40242ed87e7eSStefano Zampini auto cci = thrust::make_counting_iterator(zero); 40252ed87e7eSStefano Zampini auto cce = thrust::make_counting_iterator(c->nz); 40262ed87e7eSStefano Zampini #if 0 //Errors on SUMMIT cuda 11.1.0 40272ed87e7eSStefano Zampini PetscStackCallThrust(thrust::partition_copy(thrust::device,cci,cce,wPerm->begin(),p1,p2,thrust::identity<int>())); 40282ed87e7eSStefano Zampini #else 40292ed87e7eSStefano Zampini auto pred = thrust::identity<int>(); 40302ed87e7eSStefano Zampini PetscStackCallThrust(thrust::copy_if(thrust::device,cci,cce,wPerm->begin(),p1,pred)); 40312ed87e7eSStefano Zampini PetscStackCallThrust(thrust::remove_copy_if(thrust::device,cci,cce,wPerm->begin(),p2,pred)); 40322ed87e7eSStefano Zampini #endif 4033ed502f03SStefano Zampini stat = cusparseXcoo2csr(Ccusp->handle, 40342ed87e7eSStefano Zampini Ccoo->data().get(), 4035ed502f03SStefano Zampini c->nz, 4036ed502f03SStefano Zampini m, 4037ed502f03SStefano Zampini Ccsr->row_offsets->data().get(), 4038ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 4039ed502f03SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 40402ed87e7eSStefano Zampini delete wPerm; 40412ed87e7eSStefano Zampini delete Acoo; 40422ed87e7eSStefano Zampini delete Bcoo; 40432ed87e7eSStefano Zampini delete Ccoo; 4044ed502f03SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 4045ed502f03SStefano Zampini stat = cusparseCreateCsr(&Cmat->matDescr, Ccsr->num_rows, Ccsr->num_cols, Ccsr->num_entries, 4046ed502f03SStefano Zampini Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get(), Ccsr->values->data().get(), 4047ed502f03SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 4048ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 4049ed502f03SStefano Zampini #endif 40501a2c6b5cSJunchao Zhang if (A->form_explicit_transpose && B->form_explicit_transpose) { /* if A and B have the transpose, generate C transpose too */ 4051ed502f03SStefano Zampini PetscBool AT = Acusp->matTranspose ? PETSC_TRUE : PETSC_FALSE, BT = Bcusp->matTranspose ? PETSC_TRUE : PETSC_FALSE; 4052ed502f03SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *CmatT = new Mat_SeqAIJCUSPARSEMultStruct; 4053ed502f03SStefano Zampini CsrMatrix *CcsrT = new CsrMatrix; 4054ed502f03SStefano Zampini CsrMatrix *AcsrT = AT ? (CsrMatrix*)Acusp->matTranspose->mat : NULL; 4055ed502f03SStefano Zampini CsrMatrix *BcsrT = BT ? (CsrMatrix*)Bcusp->matTranspose->mat : NULL; 4056ed502f03SStefano Zampini 40571a2c6b5cSJunchao Zhang (*C)->form_explicit_transpose = PETSC_TRUE; 40581a2c6b5cSJunchao Zhang (*C)->transupdated = PETSC_TRUE; 4059a49f1ed0SStefano Zampini Ccusp->rowoffsets_gpu = NULL; 4060ed502f03SStefano Zampini CmatT->cprowIndices = NULL; 4061ed502f03SStefano Zampini CmatT->mat = CcsrT; 4062ed502f03SStefano Zampini CcsrT->num_rows = n; 4063ed502f03SStefano Zampini CcsrT->num_cols = m; 4064ed502f03SStefano Zampini CcsrT->num_entries = c->nz; 4065ed502f03SStefano Zampini 4066ed502f03SStefano Zampini CcsrT->row_offsets = new THRUSTINTARRAY32(n+1); 4067ed502f03SStefano Zampini CcsrT->column_indices = new THRUSTINTARRAY32(c->nz); 4068ed502f03SStefano Zampini CcsrT->values = new THRUSTARRAY(c->nz); 4069ed502f03SStefano Zampini 4070ed502f03SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 4071ed502f03SStefano Zampini auto rT = CcsrT->row_offsets->begin(); 4072ed502f03SStefano Zampini if (AT) { 4073ed502f03SStefano Zampini rT = thrust::copy(AcsrT->row_offsets->begin(),AcsrT->row_offsets->end(),rT); 4074ed502f03SStefano Zampini thrust::advance(rT,-1); 4075ed502f03SStefano Zampini } 4076ed502f03SStefano Zampini if (BT) { 4077ed502f03SStefano Zampini auto titb = thrust::make_transform_iterator(BcsrT->row_offsets->begin(),Shift(a->nz)); 4078ed502f03SStefano Zampini auto tite = thrust::make_transform_iterator(BcsrT->row_offsets->end(),Shift(a->nz)); 4079ed502f03SStefano Zampini thrust::copy(titb,tite,rT); 4080ed502f03SStefano Zampini } 4081ed502f03SStefano Zampini auto cT = CcsrT->column_indices->begin(); 4082ed502f03SStefano Zampini if (AT) cT = thrust::copy(AcsrT->column_indices->begin(),AcsrT->column_indices->end(),cT); 4083ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->column_indices->begin(),BcsrT->column_indices->end(),cT); 4084ed502f03SStefano Zampini auto vT = CcsrT->values->begin(); 4085ed502f03SStefano Zampini if (AT) vT = thrust::copy(AcsrT->values->begin(),AcsrT->values->end(),vT); 4086ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->values->begin(),BcsrT->values->end(),vT); 4087ed502f03SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 4088ed502f03SStefano Zampini 4089ed502f03SStefano Zampini stat = cusparseCreateMatDescr(&CmatT->descr);CHKERRCUSPARSE(stat); 4090ed502f03SStefano Zampini stat = cusparseSetMatIndexBase(CmatT->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 4091ed502f03SStefano Zampini stat = cusparseSetMatType(CmatT->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 4092ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(CmatT->alpha_one),sizeof(PetscScalar));CHKERRCUDA(cerr); 4093ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(CmatT->beta_zero),sizeof(PetscScalar));CHKERRCUDA(cerr); 4094ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(CmatT->beta_one), sizeof(PetscScalar));CHKERRCUDA(cerr); 4095ed502f03SStefano Zampini cerr = cudaMemcpy(CmatT->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4096ed502f03SStefano Zampini cerr = cudaMemcpy(CmatT->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4097ed502f03SStefano Zampini cerr = cudaMemcpy(CmatT->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4098ed502f03SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 4099ed502f03SStefano Zampini stat = cusparseCreateCsr(&CmatT->matDescr, CcsrT->num_rows, CcsrT->num_cols, CcsrT->num_entries, 4100ed502f03SStefano Zampini CcsrT->row_offsets->data().get(), CcsrT->column_indices->data().get(), CcsrT->values->data().get(), 4101ed502f03SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 4102ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 4103ed502f03SStefano Zampini #endif 4104ed502f03SStefano Zampini Ccusp->matTranspose = CmatT; 4105ed502f03SStefano Zampini } 4106ed502f03SStefano Zampini } 4107ed502f03SStefano Zampini 4108ed502f03SStefano Zampini c->singlemalloc = PETSC_FALSE; 4109ed502f03SStefano Zampini c->free_a = PETSC_TRUE; 4110ed502f03SStefano Zampini c->free_ij = PETSC_TRUE; 4111ed502f03SStefano Zampini ierr = PetscMalloc1(m+1,&c->i);CHKERRQ(ierr); 4112ed502f03SStefano Zampini ierr = PetscMalloc1(c->nz,&c->j);CHKERRQ(ierr); 4113ed502f03SStefano Zampini if (PetscDefined(USE_64BIT_INDICES)) { /* 32 to 64 bit conversion on the GPU and then copy to host (lazy) */ 4114ed502f03SStefano Zampini THRUSTINTARRAY ii(Ccsr->row_offsets->size()); 4115ed502f03SStefano Zampini THRUSTINTARRAY jj(Ccsr->column_indices->size()); 4116ed502f03SStefano Zampini ii = *Ccsr->row_offsets; 4117ed502f03SStefano Zampini jj = *Ccsr->column_indices; 4118ed502f03SStefano Zampini cerr = cudaMemcpy(c->i,ii.data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4119ed502f03SStefano Zampini cerr = cudaMemcpy(c->j,jj.data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4120ed502f03SStefano Zampini } else { 4121ed502f03SStefano Zampini cerr = cudaMemcpy(c->i,Ccsr->row_offsets->data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4122ed502f03SStefano Zampini cerr = cudaMemcpy(c->j,Ccsr->column_indices->data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4123ed502f03SStefano Zampini } 4124ed502f03SStefano Zampini ierr = PetscLogGpuToCpu((Ccsr->column_indices->size() + Ccsr->row_offsets->size())*sizeof(PetscInt));CHKERRQ(ierr); 4125ed502f03SStefano Zampini ierr = PetscMalloc1(m,&c->ilen);CHKERRQ(ierr); 4126ed502f03SStefano Zampini ierr = PetscMalloc1(m,&c->imax);CHKERRQ(ierr); 4127ed502f03SStefano Zampini c->maxnz = c->nz; 4128ed502f03SStefano Zampini c->nonzerorowcnt = 0; 4129ed502f03SStefano Zampini c->rmax = 0; 4130ed502f03SStefano Zampini for (i = 0; i < m; i++) { 4131ed502f03SStefano Zampini const PetscInt nn = c->i[i+1] - c->i[i]; 4132ed502f03SStefano Zampini c->ilen[i] = c->imax[i] = nn; 4133ed502f03SStefano Zampini c->nonzerorowcnt += (PetscInt)!!nn; 4134ed502f03SStefano Zampini c->rmax = PetscMax(c->rmax,nn); 4135ed502f03SStefano Zampini } 4136ed502f03SStefano Zampini ierr = MatMarkDiagonal_SeqAIJ(*C);CHKERRQ(ierr); 4137ed502f03SStefano Zampini ierr = PetscMalloc1(c->nz,&c->a);CHKERRQ(ierr); 4138ed502f03SStefano Zampini (*C)->nonzerostate++; 4139ed502f03SStefano Zampini ierr = PetscLayoutSetUp((*C)->rmap);CHKERRQ(ierr); 4140ed502f03SStefano Zampini ierr = PetscLayoutSetUp((*C)->cmap);CHKERRQ(ierr); 4141ed502f03SStefano Zampini Ccusp->nonzerostate = (*C)->nonzerostate; 4142ed502f03SStefano Zampini (*C)->preallocated = PETSC_TRUE; 4143ed502f03SStefano Zampini } else { 4144ed502f03SStefano Zampini if ((*C)->rmap->n != B->rmap->n) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Invalid number or rows %D != %D",(*C)->rmap->n,B->rmap->n); 4145ed502f03SStefano Zampini c = (Mat_SeqAIJ*)(*C)->data; 4146ed502f03SStefano Zampini if (c->nz) { 4147ed502f03SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)(*C)->spptr; 4148ed502f03SStefano Zampini if (!Ccusp->cooPerm) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cooPerm"); 4149ed502f03SStefano Zampini if (Ccusp->format == MAT_CUSPARSE_ELL || Ccusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 4150ed502f03SStefano Zampini if (Ccusp->nonzerostate != (*C)->nonzerostate) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Wrong nonzerostate"); 4151ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 4152ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 4153ed502f03SStefano Zampini if (!Acusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 4154ed502f03SStefano Zampini if (!Bcusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 4155ed502f03SStefano Zampini Acsr = (CsrMatrix*)Acusp->mat->mat; 4156ed502f03SStefano Zampini Bcsr = (CsrMatrix*)Bcusp->mat->mat; 4157ed502f03SStefano Zampini Ccsr = (CsrMatrix*)Ccusp->mat->mat; 4158ed502f03SStefano Zampini if (Acsr->num_entries != (PetscInt)Acsr->values->size()) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_COR,"A nnz %D != %D",Acsr->num_entries,(PetscInt)Acsr->values->size()); 4159ed502f03SStefano Zampini if (Bcsr->num_entries != (PetscInt)Bcsr->values->size()) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_COR,"B nnz %D != %D",Bcsr->num_entries,(PetscInt)Bcsr->values->size()); 4160ed502f03SStefano Zampini if (Ccsr->num_entries != (PetscInt)Ccsr->values->size()) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_COR,"C nnz %D != %D",Ccsr->num_entries,(PetscInt)Ccsr->values->size()); 4161ed502f03SStefano Zampini if (Ccsr->num_entries != Acsr->num_entries + Bcsr->num_entries) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_COR,"C nnz %D != %D + %D",Ccsr->num_entries,Acsr->num_entries,Bcsr->num_entries); 4162ed502f03SStefano Zampini if (Ccusp->cooPerm->size() != Ccsr->values->size()) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_COR,"permSize %D != %D",(PetscInt)Ccusp->cooPerm->size(),(PetscInt)Ccsr->values->size()); 4163ed502f03SStefano Zampini auto pmid = Ccusp->cooPerm->begin(); 4164ed502f03SStefano Zampini thrust::advance(pmid,Acsr->num_entries); 4165ed502f03SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 4166ed502f03SStefano Zampini auto zibait = thrust::make_zip_iterator(thrust::make_tuple(Acsr->values->begin(), 4167ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),Ccusp->cooPerm->begin()))); 4168ed502f03SStefano Zampini auto zieait = thrust::make_zip_iterator(thrust::make_tuple(Acsr->values->end(), 4169ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),pmid))); 4170ed502f03SStefano Zampini thrust::for_each(zibait,zieait,VecCUDAEquals()); 4171ed502f03SStefano Zampini auto zibbit = thrust::make_zip_iterator(thrust::make_tuple(Bcsr->values->begin(), 4172ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),pmid))); 4173ed502f03SStefano Zampini auto ziebit = thrust::make_zip_iterator(thrust::make_tuple(Bcsr->values->end(), 4174ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),Ccusp->cooPerm->end()))); 4175ed502f03SStefano Zampini thrust::for_each(zibbit,ziebit,VecCUDAEquals()); 4176a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(*C,PETSC_FALSE);CHKERRQ(ierr); 41771a2c6b5cSJunchao Zhang if (A->form_explicit_transpose && B->form_explicit_transpose && (*C)->form_explicit_transpose) { 4178ed502f03SStefano Zampini if (!Ccusp->matTranspose) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing transpose Mat_SeqAIJCUSPARSEMultStruct"); 4179ed502f03SStefano Zampini PetscBool AT = Acusp->matTranspose ? PETSC_TRUE : PETSC_FALSE, BT = Bcusp->matTranspose ? PETSC_TRUE : PETSC_FALSE; 4180ed502f03SStefano Zampini CsrMatrix *AcsrT = AT ? (CsrMatrix*)Acusp->matTranspose->mat : NULL; 4181ed502f03SStefano Zampini CsrMatrix *BcsrT = BT ? (CsrMatrix*)Bcusp->matTranspose->mat : NULL; 4182ed502f03SStefano Zampini CsrMatrix *CcsrT = (CsrMatrix*)Ccusp->matTranspose->mat; 4183ed502f03SStefano Zampini auto vT = CcsrT->values->begin(); 4184ed502f03SStefano Zampini if (AT) vT = thrust::copy(AcsrT->values->begin(),AcsrT->values->end(),vT); 4185ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->values->begin(),BcsrT->values->end(),vT); 41861a2c6b5cSJunchao Zhang (*C)->transupdated = PETSC_TRUE; 4187ed502f03SStefano Zampini } 4188ed502f03SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 4189ed502f03SStefano Zampini } 4190ed502f03SStefano Zampini } 4191ed502f03SStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)*C);CHKERRQ(ierr); 4192ed502f03SStefano Zampini (*C)->assembled = PETSC_TRUE; 4193ed502f03SStefano Zampini (*C)->was_assembled = PETSC_FALSE; 4194ed502f03SStefano Zampini (*C)->offloadmask = PETSC_OFFLOAD_GPU; 4195ed502f03SStefano Zampini PetscFunctionReturn(0); 4196ed502f03SStefano Zampini } 4197c215019aSStefano Zampini 4198c215019aSStefano Zampini static PetscErrorCode MatSeqAIJCopySubArray_SeqAIJCUSPARSE(Mat A, PetscInt n, const PetscInt idx[], PetscScalar v[]) 4199c215019aSStefano Zampini { 4200c215019aSStefano Zampini PetscErrorCode ierr; 4201c215019aSStefano Zampini bool dmem; 4202c215019aSStefano Zampini const PetscScalar *av; 4203c215019aSStefano Zampini cudaError_t cerr; 4204c215019aSStefano Zampini 4205c215019aSStefano Zampini PetscFunctionBegin; 4206c215019aSStefano Zampini dmem = isCudaMem(v); 4207c215019aSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArrayRead(A,&av);CHKERRQ(ierr); 4208c215019aSStefano Zampini if (n && idx) { 4209c215019aSStefano Zampini THRUSTINTARRAY widx(n); 4210c215019aSStefano Zampini widx.assign(idx,idx+n); 4211c215019aSStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscInt));CHKERRQ(ierr); 4212c215019aSStefano Zampini 4213c215019aSStefano Zampini THRUSTARRAY *w = NULL; 4214c215019aSStefano Zampini thrust::device_ptr<PetscScalar> dv; 4215c215019aSStefano Zampini if (dmem) { 4216c215019aSStefano Zampini dv = thrust::device_pointer_cast(v); 4217c215019aSStefano Zampini } else { 4218c215019aSStefano Zampini w = new THRUSTARRAY(n); 4219c215019aSStefano Zampini dv = w->data(); 4220c215019aSStefano Zampini } 4221c215019aSStefano Zampini thrust::device_ptr<const PetscScalar> dav = thrust::device_pointer_cast(av); 4222c215019aSStefano Zampini 4223c215019aSStefano Zampini auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(dav,widx.begin()),dv)); 4224c215019aSStefano Zampini auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(dav,widx.end()),dv+n)); 4225c215019aSStefano Zampini thrust::for_each(zibit,zieit,VecCUDAEquals()); 4226c215019aSStefano Zampini if (w) { 4227c215019aSStefano Zampini cerr = cudaMemcpy(v,w->data().get(),n*sizeof(PetscScalar),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4228c215019aSStefano Zampini } 4229c215019aSStefano Zampini delete w; 4230c215019aSStefano Zampini } else { 4231c215019aSStefano Zampini cerr = cudaMemcpy(v,av,n*sizeof(PetscScalar),dmem ? cudaMemcpyDeviceToDevice : cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4232c215019aSStefano Zampini } 4233c215019aSStefano Zampini if (!dmem) { ierr = PetscLogCpuToGpu(n*sizeof(PetscScalar));CHKERRQ(ierr); } 4234c215019aSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArrayRead(A,&av);CHKERRQ(ierr); 4235c215019aSStefano Zampini PetscFunctionReturn(0); 4236c215019aSStefano Zampini } 4237