1ed3cc1f0SBarry Smith /* 2ed3cc1f0SBarry Smith Basic functions for basic parallel dense matrices. 347d993e7Ssuyashtn Portions of this code are under: 447d993e7Ssuyashtn Copyright (c) 2022 Advanced Micro Devices, Inc. All rights reserved. 5ed3cc1f0SBarry Smith */ 6ed3cc1f0SBarry Smith 7c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h> /*I "petscmat.h" I*/ 88949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h> 9baa3c1c6SHong Zhang #include <petscblaslapack.h> 108965ea79SLois Curfman McInnes 11ab92ecdeSBarry Smith /*@ 1211a5261eSBarry Smith MatDenseGetLocalMatrix - For a `MATMPIDENSE` or `MATSEQDENSE` matrix returns the sequential 13ab92ecdeSBarry Smith matrix that represents the operator. For sequential matrices it returns itself. 14ab92ecdeSBarry Smith 15ab92ecdeSBarry Smith Input Parameter: 162ef1f0ffSBarry Smith . A - the sequential or MPI `MATDENSE` matrix 17ab92ecdeSBarry Smith 18ab92ecdeSBarry Smith Output Parameter: 19ab92ecdeSBarry Smith . B - the inner matrix 20ab92ecdeSBarry Smith 218e6c10adSSatish Balay Level: intermediate 228e6c10adSSatish Balay 231cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MATMPIDENSE`, `MATSEQDENSE` 24ab92ecdeSBarry Smith @*/ 25d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetLocalMatrix(Mat A, Mat *B) 26d71ae5a4SJacob Faibussowitsch { 27ab92ecdeSBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 28ace3abfcSBarry Smith PetscBool flg; 29ab92ecdeSBarry Smith 30ab92ecdeSBarry Smith PetscFunctionBegin; 31d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 324f572ea9SToby Isaac PetscAssertPointer(B, 2); 339566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATMPIDENSE, &flg)); 342205254eSKarl Rupp if (flg) *B = mat->A; 35f140bc17SStefano Zampini else { 369566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATSEQDENSE, &flg)); 3728b400f6SJacob Faibussowitsch PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not for matrix type %s", ((PetscObject)A)->type_name); 38f140bc17SStefano Zampini *B = A; 39f140bc17SStefano Zampini } 403ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 41ab92ecdeSBarry Smith } 42ab92ecdeSBarry Smith 4366976f2fSJacob Faibussowitsch static PetscErrorCode MatCopy_MPIDense(Mat A, Mat B, MatStructure s) 44d71ae5a4SJacob Faibussowitsch { 45a76f77c3SStefano Zampini Mat_MPIDense *Amat = (Mat_MPIDense *)A->data; 46a76f77c3SStefano Zampini Mat_MPIDense *Bmat = (Mat_MPIDense *)B->data; 47a76f77c3SStefano Zampini 48a76f77c3SStefano Zampini PetscFunctionBegin; 499566063dSJacob Faibussowitsch PetscCall(MatCopy(Amat->A, Bmat->A, s)); 503ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 51a76f77c3SStefano Zampini } 52a76f77c3SStefano Zampini 53d71ae5a4SJacob Faibussowitsch PetscErrorCode MatShift_MPIDense(Mat A, PetscScalar alpha) 54d71ae5a4SJacob Faibussowitsch { 552f605a99SJose E. Roman Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 562f605a99SJose E. Roman PetscInt j, lda, rstart = A->rmap->rstart, rend = A->rmap->rend, rend2; 572f605a99SJose E. Roman PetscScalar *v; 582f605a99SJose E. Roman 592f605a99SJose E. Roman PetscFunctionBegin; 602f605a99SJose E. Roman PetscCall(MatDenseGetArray(mat->A, &v)); 612f605a99SJose E. Roman PetscCall(MatDenseGetLDA(mat->A, &lda)); 622f605a99SJose E. Roman rend2 = PetscMin(rend, A->cmap->N); 632f605a99SJose E. Roman if (rend2 > rstart) { 642f605a99SJose E. Roman for (j = rstart; j < rend2; j++) v[j - rstart + j * lda] += alpha; 652f605a99SJose E. Roman PetscCall(PetscLogFlops(rend2 - rstart)); 662f605a99SJose E. Roman } 672f605a99SJose E. Roman PetscCall(MatDenseRestoreArray(mat->A, &v)); 683ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 692f605a99SJose E. Roman } 702f605a99SJose E. Roman 7166976f2fSJacob Faibussowitsch static PetscErrorCode MatGetRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) 72d71ae5a4SJacob Faibussowitsch { 73ba8c8a56SBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 74d0f46423SBarry Smith PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 75ba8c8a56SBarry Smith 76ba8c8a56SBarry Smith PetscFunctionBegin; 77aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 78ba8c8a56SBarry Smith lrow = row - rstart; 799566063dSJacob Faibussowitsch PetscCall(MatGetRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 803ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 81ba8c8a56SBarry Smith } 82ba8c8a56SBarry Smith 8366976f2fSJacob Faibussowitsch static PetscErrorCode MatRestoreRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) 84d71ae5a4SJacob Faibussowitsch { 85637a0070SStefano Zampini Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 86637a0070SStefano Zampini PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 87ba8c8a56SBarry Smith 88ba8c8a56SBarry Smith PetscFunctionBegin; 89aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 90637a0070SStefano Zampini lrow = row - rstart; 919566063dSJacob Faibussowitsch PetscCall(MatRestoreRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 923ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 93ba8c8a56SBarry Smith } 94ba8c8a56SBarry Smith 9566976f2fSJacob Faibussowitsch static PetscErrorCode MatGetDiagonalBlock_MPIDense(Mat A, Mat *a) 96d71ae5a4SJacob Faibussowitsch { 970de54da6SSatish Balay Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 98d0f46423SBarry Smith PetscInt m = A->rmap->n, rstart = A->rmap->rstart; 9987828ca2SBarry Smith PetscScalar *array; 1000de54da6SSatish Balay MPI_Comm comm; 1014b6ae80fSStefano Zampini PetscBool flg; 10211bd1e4dSLisandro Dalcin Mat B; 1030de54da6SSatish Balay 1040de54da6SSatish Balay PetscFunctionBegin; 1059566063dSJacob Faibussowitsch PetscCall(MatHasCongruentLayouts(A, &flg)); 10628b400f6SJacob Faibussowitsch PetscCheck(flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Only square matrices supported."); 1079566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery((PetscObject)A, "DiagonalBlock", (PetscObject *)&B)); 108616b8fbbSStefano Zampini if (!B) { /* This should use MatDenseGetSubMatrix (not create), but we would need a call like MatRestoreDiagonalBlock */ 109a51cd166SPierre Jolivet #if PetscDefined(HAVE_CUDA) 1109566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSECUDA, &flg)); 11128b400f6SJacob Faibussowitsch PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSECUDA); 112a51cd166SPierre Jolivet #elif PetscDefined(HAVE_HIP) 11347d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSEHIP, &flg)); 11447d993e7Ssuyashtn PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSEHIP); 11547d993e7Ssuyashtn #endif 116*f4f49eeaSPierre Jolivet PetscCall(PetscObjectGetComm((PetscObject)mdn->A, &comm)); 1179566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &B)); 1189566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, m, m, m, m)); 1199566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)mdn->A)->type_name)); 1209566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, (const PetscScalar **)&array)); 1219566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(B, array + m * rstart)); 1229566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, (const PetscScalar **)&array)); 1239566063dSJacob Faibussowitsch PetscCall(PetscObjectCompose((PetscObject)A, "DiagonalBlock", (PetscObject)B)); 12411bd1e4dSLisandro Dalcin *a = B; 1259566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 1262205254eSKarl Rupp } else *a = B; 1273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1280de54da6SSatish Balay } 1290de54da6SSatish Balay 13066976f2fSJacob Faibussowitsch static PetscErrorCode MatSetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], const PetscScalar v[], InsertMode addv) 131d71ae5a4SJacob Faibussowitsch { 13239b7565bSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)mat->data; 133d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 134ace3abfcSBarry Smith PetscBool roworiented = A->roworiented; 1358965ea79SLois Curfman McInnes 1363a40ed3dSBarry Smith PetscFunctionBegin; 1378965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 1385ef9f2a5SBarry Smith if (idxm[i] < 0) continue; 13908401ef6SPierre Jolivet PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 1408965ea79SLois Curfman McInnes if (idxm[i] >= rstart && idxm[i] < rend) { 1418965ea79SLois Curfman McInnes row = idxm[i] - rstart; 14239b7565bSBarry Smith if (roworiented) { 1439566063dSJacob Faibussowitsch PetscCall(MatSetValues(A->A, 1, &row, n, idxn, v + i * n, addv)); 1443a40ed3dSBarry Smith } else { 1458965ea79SLois Curfman McInnes for (j = 0; j < n; j++) { 1465ef9f2a5SBarry Smith if (idxn[j] < 0) continue; 14708401ef6SPierre Jolivet PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 1489566063dSJacob Faibussowitsch PetscCall(MatSetValues(A->A, 1, &row, 1, &idxn[j], v + i + j * m, addv)); 14939b7565bSBarry Smith } 1508965ea79SLois Curfman McInnes } 1512205254eSKarl Rupp } else if (!A->donotstash) { 1525080c13bSMatthew G Knepley mat->assembled = PETSC_FALSE; 15339b7565bSBarry Smith if (roworiented) { 1549566063dSJacob Faibussowitsch PetscCall(MatStashValuesRow_Private(&mat->stash, idxm[i], n, idxn, v + i * n, PETSC_FALSE)); 155d36fbae8SSatish Balay } else { 1569566063dSJacob Faibussowitsch PetscCall(MatStashValuesCol_Private(&mat->stash, idxm[i], n, idxn, v + i, m, PETSC_FALSE)); 15739b7565bSBarry Smith } 158b49de8d1SLois Curfman McInnes } 159b49de8d1SLois Curfman McInnes } 1603ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 161b49de8d1SLois Curfman McInnes } 162b49de8d1SLois Curfman McInnes 16366976f2fSJacob Faibussowitsch static PetscErrorCode MatGetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], PetscScalar v[]) 164d71ae5a4SJacob Faibussowitsch { 165b49de8d1SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 166d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 167b49de8d1SLois Curfman McInnes 1683a40ed3dSBarry Smith PetscFunctionBegin; 169b49de8d1SLois Curfman McInnes for (i = 0; i < m; i++) { 17054c59aa7SJacob Faibussowitsch if (idxm[i] < 0) continue; /* negative row */ 17154c59aa7SJacob Faibussowitsch PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 172b49de8d1SLois Curfman McInnes if (idxm[i] >= rstart && idxm[i] < rend) { 173b49de8d1SLois Curfman McInnes row = idxm[i] - rstart; 174b49de8d1SLois Curfman McInnes for (j = 0; j < n; j++) { 17554c59aa7SJacob Faibussowitsch if (idxn[j] < 0) continue; /* negative column */ 17654c59aa7SJacob Faibussowitsch PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 1779566063dSJacob Faibussowitsch PetscCall(MatGetValues(mdn->A, 1, &row, 1, &idxn[j], v + i * n + j)); 178b49de8d1SLois Curfman McInnes } 179e7e72b3dSBarry Smith } else SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Only local values currently supported"); 1808965ea79SLois Curfman McInnes } 1813ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1828965ea79SLois Curfman McInnes } 1838965ea79SLois Curfman McInnes 184d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A, PetscInt *lda) 185d71ae5a4SJacob Faibussowitsch { 18649a6ff4bSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 18749a6ff4bSBarry Smith 18849a6ff4bSBarry Smith PetscFunctionBegin; 1899566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, lda)); 1903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19149a6ff4bSBarry Smith } 19249a6ff4bSBarry Smith 193d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A, PetscInt lda) 194d71ae5a4SJacob Faibussowitsch { 195ad16ce7aSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 19647d993e7Ssuyashtn MatType mtype = MATSEQDENSE; 197ad16ce7aSStefano Zampini 198ad16ce7aSStefano Zampini PetscFunctionBegin; 19917359960SJose E. Roman if (!a->A) { 20028b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2019566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 2029566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 2039566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 2049566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, A->rmap->n, A->cmap->N, A->rmap->n, A->cmap->N)); 205a51cd166SPierre Jolivet #if PetscDefined(HAVE_CUDA) 20647d993e7Ssuyashtn PetscBool iscuda; 2079566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSECUDA, &iscuda)); 20847d993e7Ssuyashtn if (iscuda) mtype = MATSEQDENSECUDA; 209a51cd166SPierre Jolivet #elif PetscDefined(HAVE_HIP) 21047d993e7Ssuyashtn PetscBool iship; 21147d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSEHIP, &iship)); 21247d993e7Ssuyashtn if (iship) mtype = MATSEQDENSEHIP; 21347d993e7Ssuyashtn #endif 21447d993e7Ssuyashtn PetscCall(MatSetType(a->A, mtype)); 21517359960SJose E. Roman } 2169566063dSJacob Faibussowitsch PetscCall(MatDenseSetLDA(a->A, lda)); 2173ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 218ad16ce7aSStefano Zampini } 219ad16ce7aSStefano Zampini 220d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetArray_MPIDense(Mat A, PetscScalar **array) 221d71ae5a4SJacob Faibussowitsch { 222ff14e315SSatish Balay Mat_MPIDense *a = (Mat_MPIDense *)A->data; 223ff14e315SSatish Balay 2243a40ed3dSBarry Smith PetscFunctionBegin; 22528b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2269566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, array)); 2273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 228ff14e315SSatish Balay } 229ff14e315SSatish Balay 230f1e99121SPierre Jolivet static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A, PetscScalar **array) 231d71ae5a4SJacob Faibussowitsch { 2328572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2338572280aSBarry Smith 2348572280aSBarry Smith PetscFunctionBegin; 23528b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 236f1e99121SPierre Jolivet PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)array)); 2373ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2388572280aSBarry Smith } 2398572280aSBarry Smith 240d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A, PetscScalar **array) 241d71ae5a4SJacob Faibussowitsch { 2426947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2436947451fSStefano Zampini 2446947451fSStefano Zampini PetscFunctionBegin; 24528b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2469566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, array)); 2473ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2486947451fSStefano Zampini } 2496947451fSStefano Zampini 250d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A, const PetscScalar *array) 251d71ae5a4SJacob Faibussowitsch { 252d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 253d3042a70SBarry Smith 254d3042a70SBarry Smith PetscFunctionBegin; 25528b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 25628b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2579566063dSJacob Faibussowitsch PetscCall(MatDensePlaceArray(a->A, array)); 2583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 259d3042a70SBarry Smith } 260d3042a70SBarry Smith 261d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseResetArray_MPIDense(Mat A) 262d71ae5a4SJacob Faibussowitsch { 263d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 264d3042a70SBarry Smith 265d3042a70SBarry Smith PetscFunctionBegin; 26628b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 26728b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2689566063dSJacob Faibussowitsch PetscCall(MatDenseResetArray(a->A)); 2693ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 270d3042a70SBarry Smith } 271d3042a70SBarry Smith 272d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A, const PetscScalar *array) 273d71ae5a4SJacob Faibussowitsch { 274d5ea218eSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 275d5ea218eSStefano Zampini 276d5ea218eSStefano Zampini PetscFunctionBegin; 27728b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 27828b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2799566063dSJacob Faibussowitsch PetscCall(MatDenseReplaceArray(a->A, array)); 2803ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 281d5ea218eSStefano Zampini } 282d5ea218eSStefano Zampini 283d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A, IS isrow, IS iscol, MatReuse scall, Mat *B) 284d71ae5a4SJacob Faibussowitsch { 285ca3fa75bSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data, *newmatd; 286637a0070SStefano Zampini PetscInt lda, i, j, rstart, rend, nrows, ncols, Ncols, nlrows, nlcols; 2875d0c19d7SBarry Smith const PetscInt *irow, *icol; 288637a0070SStefano Zampini const PetscScalar *v; 289637a0070SStefano Zampini PetscScalar *bv; 290ca3fa75bSLois Curfman McInnes Mat newmat; 2914aa3045dSJed Brown IS iscol_local; 29242a884f0SBarry Smith MPI_Comm comm_is, comm_mat; 293ca3fa75bSLois Curfman McInnes 294ca3fa75bSLois Curfman McInnes PetscFunctionBegin; 2959566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm_mat)); 2969566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)iscol, &comm_is)); 29708401ef6SPierre Jolivet PetscCheck(comm_mat == comm_is, PETSC_COMM_SELF, PETSC_ERR_ARG_NOTSAMECOMM, "IS communicator must match matrix communicator"); 29842a884f0SBarry Smith 2999566063dSJacob Faibussowitsch PetscCall(ISAllGather(iscol, &iscol_local)); 3009566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isrow, &irow)); 3019566063dSJacob Faibussowitsch PetscCall(ISGetIndices(iscol_local, &icol)); 3029566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(isrow, &nrows)); 3039566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(iscol, &ncols)); 3049566063dSJacob Faibussowitsch PetscCall(ISGetSize(iscol, &Ncols)); /* global number of columns, size of iscol_local */ 305ca3fa75bSLois Curfman McInnes 306ca3fa75bSLois Curfman McInnes /* No parallel redistribution currently supported! Should really check each index set 307da81f932SPierre Jolivet to confirm that it is OK. ... Currently supports only submatrix same partitioning as 3087eba5e9cSLois Curfman McInnes original matrix! */ 309ca3fa75bSLois Curfman McInnes 3109566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &nlrows, &nlcols)); 3119566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRange(A, &rstart, &rend)); 312ca3fa75bSLois Curfman McInnes 313ca3fa75bSLois Curfman McInnes /* Check submatrix call */ 314ca3fa75bSLois Curfman McInnes if (scall == MAT_REUSE_MATRIX) { 315e32f2f54SBarry Smith /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */ 3167eba5e9cSLois Curfman McInnes /* Really need to test rows and column sizes! */ 317ca3fa75bSLois Curfman McInnes newmat = *B; 318ca3fa75bSLois Curfman McInnes } else { 319ca3fa75bSLois Curfman McInnes /* Create and fill new matrix */ 3209566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &newmat)); 3219566063dSJacob Faibussowitsch PetscCall(MatSetSizes(newmat, nrows, ncols, PETSC_DECIDE, Ncols)); 3229566063dSJacob Faibussowitsch PetscCall(MatSetType(newmat, ((PetscObject)A)->type_name)); 3239566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(newmat, NULL)); 324ca3fa75bSLois Curfman McInnes } 325ca3fa75bSLois Curfman McInnes 326ca3fa75bSLois Curfman McInnes /* Now extract the data pointers and do the copy, column at a time */ 327ca3fa75bSLois Curfman McInnes newmatd = (Mat_MPIDense *)newmat->data; 3289566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(newmatd->A, &bv)); 3299566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mat->A, &v)); 3309566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mat->A, &lda)); 3314aa3045dSJed Brown for (i = 0; i < Ncols; i++) { 332637a0070SStefano Zampini const PetscScalar *av = v + lda * icol[i]; 333ad540459SPierre Jolivet for (j = 0; j < nrows; j++) *bv++ = av[irow[j] - rstart]; 334ca3fa75bSLois Curfman McInnes } 3359566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mat->A, &v)); 3369566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(newmatd->A, &bv)); 337ca3fa75bSLois Curfman McInnes 338ca3fa75bSLois Curfman McInnes /* Assemble the matrices so that the correct flags are set */ 3399566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(newmat, MAT_FINAL_ASSEMBLY)); 3409566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(newmat, MAT_FINAL_ASSEMBLY)); 341ca3fa75bSLois Curfman McInnes 342ca3fa75bSLois Curfman McInnes /* Free work space */ 3439566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow, &irow)); 3449566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iscol_local, &icol)); 3459566063dSJacob Faibussowitsch PetscCall(ISDestroy(&iscol_local)); 346ca3fa75bSLois Curfman McInnes *B = newmat; 3473ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 348ca3fa75bSLois Curfman McInnes } 349ca3fa75bSLois Curfman McInnes 35066976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A, PetscScalar **array) 351d71ae5a4SJacob Faibussowitsch { 35273a71a0fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 35373a71a0fSBarry Smith 3543a40ed3dSBarry Smith PetscFunctionBegin; 3559566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, array)); 3563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 357ff14e315SSatish Balay } 358ff14e315SSatish Balay 359f1e99121SPierre Jolivet static PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A, PetscScalar **array) 360d71ae5a4SJacob Faibussowitsch { 3618572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3628572280aSBarry Smith 3638572280aSBarry Smith PetscFunctionBegin; 364f1e99121SPierre Jolivet PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)array)); 3653ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3668572280aSBarry Smith } 3678572280aSBarry Smith 36866976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A, PetscScalar **array) 369d71ae5a4SJacob Faibussowitsch { 3706947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3716947451fSStefano Zampini 3726947451fSStefano Zampini PetscFunctionBegin; 3739566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, array)); 3743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3756947451fSStefano Zampini } 3766947451fSStefano Zampini 37766976f2fSJacob Faibussowitsch static PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat, MatAssemblyType mode) 378d71ae5a4SJacob Faibussowitsch { 37939ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 38013f74950SBarry Smith PetscInt nstash, reallocs; 3818965ea79SLois Curfman McInnes 3823a40ed3dSBarry Smith PetscFunctionBegin; 3833ba16761SJacob Faibussowitsch if (mdn->donotstash || mat->nooffprocentries) PetscFunctionReturn(PETSC_SUCCESS); 3848965ea79SLois Curfman McInnes 3859566063dSJacob Faibussowitsch PetscCall(MatStashScatterBegin_Private(mat, &mat->stash, mat->rmap->range)); 3869566063dSJacob Faibussowitsch PetscCall(MatStashGetInfo_Private(&mat->stash, &nstash, &reallocs)); 3879566063dSJacob Faibussowitsch PetscCall(PetscInfo(mdn->A, "Stash has %" PetscInt_FMT " entries, uses %" PetscInt_FMT " mallocs.\n", nstash, reallocs)); 3883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3898965ea79SLois Curfman McInnes } 3908965ea79SLois Curfman McInnes 39166976f2fSJacob Faibussowitsch static PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat, MatAssemblyType mode) 392d71ae5a4SJacob Faibussowitsch { 39339ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 39413f74950SBarry Smith PetscInt i, *row, *col, flg, j, rstart, ncols; 39513f74950SBarry Smith PetscMPIInt n; 39687828ca2SBarry Smith PetscScalar *val; 3978965ea79SLois Curfman McInnes 3983a40ed3dSBarry Smith PetscFunctionBegin; 399910cf402Sprj- if (!mdn->donotstash && !mat->nooffprocentries) { 4008965ea79SLois Curfman McInnes /* wait on receives */ 4017ef1d9bdSSatish Balay while (1) { 4029566063dSJacob Faibussowitsch PetscCall(MatStashScatterGetMesg_Private(&mat->stash, &n, &row, &col, &val, &flg)); 4037ef1d9bdSSatish Balay if (!flg) break; 4048965ea79SLois Curfman McInnes 4057ef1d9bdSSatish Balay for (i = 0; i < n;) { 4067ef1d9bdSSatish Balay /* Now identify the consecutive vals belonging to the same row */ 4072205254eSKarl Rupp for (j = i, rstart = row[j]; j < n; j++) { 4082205254eSKarl Rupp if (row[j] != rstart) break; 4092205254eSKarl Rupp } 4107ef1d9bdSSatish Balay if (j < n) ncols = j - i; 4117ef1d9bdSSatish Balay else ncols = n - i; 4127ef1d9bdSSatish Balay /* Now assemble all these values with a single function call */ 4139566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(mat, 1, row + i, ncols, col + i, val + i, mat->insertmode)); 4147ef1d9bdSSatish Balay i = j; 4158965ea79SLois Curfman McInnes } 4167ef1d9bdSSatish Balay } 4179566063dSJacob Faibussowitsch PetscCall(MatStashScatterEnd_Private(&mat->stash)); 418910cf402Sprj- } 4198965ea79SLois Curfman McInnes 4209566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mdn->A, mode)); 4219566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mdn->A, mode)); 4223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4238965ea79SLois Curfman McInnes } 4248965ea79SLois Curfman McInnes 42566976f2fSJacob Faibussowitsch static PetscErrorCode MatZeroEntries_MPIDense(Mat A) 426d71ae5a4SJacob Faibussowitsch { 42739ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 4283a40ed3dSBarry Smith 4293a40ed3dSBarry Smith PetscFunctionBegin; 4309566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(l->A)); 4313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4328965ea79SLois Curfman McInnes } 4338965ea79SLois Curfman McInnes 43466976f2fSJacob Faibussowitsch static PetscErrorCode MatZeroRows_MPIDense(Mat A, PetscInt n, const PetscInt rows[], PetscScalar diag, Vec x, Vec b) 435d71ae5a4SJacob Faibussowitsch { 43639ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 437637a0070SStefano Zampini PetscInt i, len, *lrows; 438637a0070SStefano Zampini 439637a0070SStefano Zampini PetscFunctionBegin; 440637a0070SStefano Zampini /* get locally owned rows */ 4419566063dSJacob Faibussowitsch PetscCall(PetscLayoutMapLocal(A->rmap, n, rows, &len, &lrows, NULL)); 442637a0070SStefano Zampini /* fix right hand side if needed */ 443637a0070SStefano Zampini if (x && b) { 44497b48c8fSBarry Smith const PetscScalar *xx; 44597b48c8fSBarry Smith PetscScalar *bb; 4468965ea79SLois Curfman McInnes 4479566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(x, &xx)); 4489566063dSJacob Faibussowitsch PetscCall(VecGetArrayWrite(b, &bb)); 449637a0070SStefano Zampini for (i = 0; i < len; ++i) bb[lrows[i]] = diag * xx[lrows[i]]; 4509566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(x, &xx)); 4519566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayWrite(b, &bb)); 45297b48c8fSBarry Smith } 4539566063dSJacob Faibussowitsch PetscCall(MatZeroRows(l->A, len, lrows, 0.0, NULL, NULL)); 454e2eb51b1SBarry Smith if (diag != 0.0) { 455637a0070SStefano Zampini Vec d; 456b9679d65SBarry Smith 4579566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(A, NULL, &d)); 4589566063dSJacob Faibussowitsch PetscCall(VecSet(d, diag)); 4599566063dSJacob Faibussowitsch PetscCall(MatDiagonalSet(A, d, INSERT_VALUES)); 4609566063dSJacob Faibussowitsch PetscCall(VecDestroy(&d)); 461b9679d65SBarry Smith } 4629566063dSJacob Faibussowitsch PetscCall(PetscFree(lrows)); 4633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4648965ea79SLois Curfman McInnes } 4658965ea79SLois Curfman McInnes 46666976f2fSJacob Faibussowitsch static PetscErrorCode MatMult_MPIDense(Mat mat, Vec xx, Vec yy) 467d71ae5a4SJacob Faibussowitsch { 46839ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 469637a0070SStefano Zampini const PetscScalar *ax; 470637a0070SStefano Zampini PetscScalar *ay; 471d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 472c456f294SBarry Smith 4733a40ed3dSBarry Smith PetscFunctionBegin; 4746f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 4759566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 4769566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 4779566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 4789566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 4799566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 4809566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 4819566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->mult)(mdn->A, mdn->lvec, yy)); 4823ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4838965ea79SLois Curfman McInnes } 4848965ea79SLois Curfman McInnes 48566976f2fSJacob Faibussowitsch static PetscErrorCode MatMultAdd_MPIDense(Mat mat, Vec xx, Vec yy, Vec zz) 486d71ae5a4SJacob Faibussowitsch { 48739ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 488637a0070SStefano Zampini const PetscScalar *ax; 489637a0070SStefano Zampini PetscScalar *ay; 490d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 491c456f294SBarry Smith 4923a40ed3dSBarry Smith PetscFunctionBegin; 4936f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 4949566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 4959566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 4969566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 4979566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 4989566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 4999566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 5009566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->multadd)(mdn->A, mdn->lvec, yy, zz)); 5013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5028965ea79SLois Curfman McInnes } 5038965ea79SLois Curfman McInnes 504459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeKernel_MPIDense(Mat A, Vec xx, Vec yy, PetscBool herm) 505d71ae5a4SJacob Faibussowitsch { 506096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 507637a0070SStefano Zampini const PetscScalar *ax; 508637a0070SStefano Zampini PetscScalar *ay; 509d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 5104d86920dSPierre Jolivet 5113a40ed3dSBarry Smith PetscFunctionBegin; 5126f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 5139566063dSJacob Faibussowitsch PetscCall(VecSet(yy, 0.0)); 514459e8d23SBlanca Mellado Pinto if (herm) PetscCall((*a->A->ops->multhermitiantranspose)(a->A, xx, a->lvec)); 515459e8d23SBlanca Mellado Pinto else PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 5169566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 5179566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(yy, &ay, &aymtype)); 5189566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 5199566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 5209566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 5219566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(yy, &ay)); 5223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 523096963f5SLois Curfman McInnes } 524096963f5SLois Curfman McInnes 525459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeAddKernel_MPIDense(Mat A, Vec xx, Vec yy, Vec zz, PetscBool herm) 526d71ae5a4SJacob Faibussowitsch { 527096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 528637a0070SStefano Zampini const PetscScalar *ax; 529637a0070SStefano Zampini PetscScalar *ay; 530d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 531096963f5SLois Curfman McInnes 5323a40ed3dSBarry Smith PetscFunctionBegin; 5336f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 5349566063dSJacob Faibussowitsch PetscCall(VecCopy(yy, zz)); 535459e8d23SBlanca Mellado Pinto if (herm) PetscCall((*a->A->ops->multhermitiantranspose)(a->A, xx, a->lvec)); 536459e8d23SBlanca Mellado Pinto else PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 5379566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 5389566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(zz, &ay, &aymtype)); 5399566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 5409566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 5419566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 5429566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(zz, &ay)); 5433ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 544096963f5SLois Curfman McInnes } 545096963f5SLois Curfman McInnes 546459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTranspose_MPIDense(Mat A, Vec xx, Vec yy) 547459e8d23SBlanca Mellado Pinto { 548459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 549459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeKernel_MPIDense(A, xx, yy, PETSC_FALSE)); 550459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 551459e8d23SBlanca Mellado Pinto } 552459e8d23SBlanca Mellado Pinto 553459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz) 554459e8d23SBlanca Mellado Pinto { 555459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 556459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeAddKernel_MPIDense(A, xx, yy, zz, PETSC_FALSE)); 557459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 558459e8d23SBlanca Mellado Pinto } 559459e8d23SBlanca Mellado Pinto 560459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultHermitianTranspose_MPIDense(Mat A, Vec xx, Vec yy) 561459e8d23SBlanca Mellado Pinto { 562459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 563459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeKernel_MPIDense(A, xx, yy, PETSC_TRUE)); 564459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 565459e8d23SBlanca Mellado Pinto } 566459e8d23SBlanca Mellado Pinto 567459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultHermitianTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz) 568459e8d23SBlanca Mellado Pinto { 569459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 570459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeAddKernel_MPIDense(A, xx, yy, zz, PETSC_TRUE)); 571459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 572459e8d23SBlanca Mellado Pinto } 573459e8d23SBlanca Mellado Pinto 574d71ae5a4SJacob Faibussowitsch PetscErrorCode MatGetDiagonal_MPIDense(Mat A, Vec v) 575d71ae5a4SJacob Faibussowitsch { 57639ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 57779560b15SJacob Faibussowitsch PetscInt lda, len, i, nl, ng, m = A->rmap->n, radd; 57879560b15SJacob Faibussowitsch PetscScalar *x; 579637a0070SStefano Zampini const PetscScalar *av; 580ed3cc1f0SBarry Smith 5813a40ed3dSBarry Smith PetscFunctionBegin; 5829566063dSJacob Faibussowitsch PetscCall(VecGetArray(v, &x)); 58379560b15SJacob Faibussowitsch PetscCall(VecGetSize(v, &ng)); 58479560b15SJacob Faibussowitsch PetscCheck(ng == A->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Nonconforming mat and vec"); 58579560b15SJacob Faibussowitsch PetscCall(VecGetLocalSize(v, &nl)); 586d0f46423SBarry Smith len = PetscMin(a->A->rmap->n, a->A->cmap->n); 587d0f46423SBarry Smith radd = A->rmap->rstart * m; 5889566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 5899566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 590ad540459SPierre Jolivet for (i = 0; i < len; i++) x[i] = av[radd + i * lda + i]; 5919566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 59279560b15SJacob Faibussowitsch PetscCall(PetscArrayzero(x + i, nl - i)); 5939566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(v, &x)); 5943ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5958965ea79SLois Curfman McInnes } 5968965ea79SLois Curfman McInnes 59766976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MPIDense(Mat mat) 598d71ae5a4SJacob Faibussowitsch { 5993501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 600ed3cc1f0SBarry Smith 6013a40ed3dSBarry Smith PetscFunctionBegin; 6023ba16761SJacob Faibussowitsch PetscCall(PetscLogObjectState((PetscObject)mat, "Rows=%" PetscInt_FMT ", Cols=%" PetscInt_FMT, mat->rmap->N, mat->cmap->N)); 6039566063dSJacob Faibussowitsch PetscCall(MatStashDestroy_Private(&mat->stash)); 60428b400f6SJacob Faibussowitsch PetscCheck(!mdn->vecinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 60528b400f6SJacob Faibussowitsch PetscCheck(!mdn->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 6069566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->A)); 6079566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->lvec)); 6089566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&mdn->Mvctx)); 6099566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->cvec)); 6109566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->cmat)); 61101b82886SBarry Smith 6129566063dSJacob Faibussowitsch PetscCall(PetscFree(mat->data)); 6139566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, NULL)); 6148baccfbdSHong Zhang 6159566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", NULL)); 6169566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", NULL)); 6179566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", NULL)); 6189566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", NULL)); 6199566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", NULL)); 6209566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", NULL)); 6219566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", NULL)); 6229566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", NULL)); 6239566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", NULL)); 6249566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", NULL)); 6259566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", NULL)); 6269566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", NULL)); 6279566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", NULL)); 6288baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 6299566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", NULL)); 6308baccfbdSHong Zhang #endif 631d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 6329566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", NULL)); 633d24d4204SJose E. Roman #endif 6349566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", NULL)); 6359566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", NULL)); 6369566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", NULL)); 6376718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 6389566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", NULL)); 6399566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", NULL)); 6402e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", NULL)); 6412e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensecuda_mpidense_C", NULL)); 6422e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensecuda_C", NULL)); 6432e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C", NULL)); 6442e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaij_C", NULL)); 6452e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C", NULL)); 6462e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArray_C", NULL)); 6472e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayRead_C", NULL)); 6482e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayWrite_C", NULL)); 6492e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArray_C", NULL)); 6502e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayRead_C", NULL)); 6512e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayWrite_C", NULL)); 6522e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAPlaceArray_C", NULL)); 6532e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAResetArray_C", NULL)); 6542e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAReplaceArray_C", NULL)); 6553d9668e3SJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDASetPreallocation_C", NULL)); 6566718818eSStefano Zampini #endif 65747d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 65847d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidense_C", NULL)); 65947d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijhipsparse_C", NULL)); 66047d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensehip_C", NULL)); 66147d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensehip_mpidense_C", NULL)); 66247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensehip_C", NULL)); 66347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidensehip_C", NULL)); 66447d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensehip_mpiaij_C", NULL)); 66547d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensehip_mpiaijhipsparse_C", NULL)); 66647d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArray_C", NULL)); 66747d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArrayRead_C", NULL)); 66847d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArrayWrite_C", NULL)); 66947d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArray_C", NULL)); 67047d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArrayRead_C", NULL)); 67147d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArrayWrite_C", NULL)); 67247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPPlaceArray_C", NULL)); 67347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPResetArray_C", NULL)); 67447d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPReplaceArray_C", NULL)); 6753d9668e3SJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPSetPreallocation_C", NULL)); 67647d993e7Ssuyashtn #endif 6779566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", NULL)); 6789566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", NULL)); 6799566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", NULL)); 6809566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", NULL)); 6819566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", NULL)); 6829566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", NULL)); 6839566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", NULL)); 6849566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", NULL)); 6859566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", NULL)); 6869566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", NULL)); 687f8103e6bSStefano Zampini 688f8103e6bSStefano Zampini PetscCall(PetscObjectCompose((PetscObject)mat, "DiagonalBlock", NULL)); 6893ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 6908965ea79SLois Curfman McInnes } 69139ddd567SLois Curfman McInnes 6929804daf3SBarry Smith #include <petscdraw.h> 693d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat, PetscViewer viewer) 694d71ae5a4SJacob Faibussowitsch { 69539ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 696616b8fbbSStefano Zampini PetscMPIInt rank; 69719fd82e9SBarry Smith PetscViewerType vtype; 698ace3abfcSBarry Smith PetscBool iascii, isdraw; 699b0a32e0cSBarry Smith PetscViewer sviewer; 700f3ef73ceSBarry Smith PetscViewerFormat format; 7018965ea79SLois Curfman McInnes 7023a40ed3dSBarry Smith PetscFunctionBegin; 7039566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)mat), &rank)); 7049566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 7059566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 70632077d6dSBarry Smith if (iascii) { 7079566063dSJacob Faibussowitsch PetscCall(PetscViewerGetType(viewer, &vtype)); 7089566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(viewer, &format)); 709456192e2SBarry Smith if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 7104e220ebcSLois Curfman McInnes MatInfo info; 7119566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mat, MAT_LOCAL, &info)); 7129566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushSynchronized(viewer)); 7139371c9d4SSatish Balay PetscCall(PetscViewerASCIISynchronizedPrintf(viewer, " [%d] local rows %" PetscInt_FMT " nz %" PetscInt_FMT " nz alloced %" PetscInt_FMT " mem %" PetscInt_FMT " \n", rank, mat->rmap->n, (PetscInt)info.nz_used, (PetscInt)info.nz_allocated, 7149371c9d4SSatish Balay (PetscInt)info.memory)); 7159566063dSJacob Faibussowitsch PetscCall(PetscViewerFlush(viewer)); 7169566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopSynchronized(viewer)); 7176f08ad05SPierre Jolivet if (mdn->Mvctx) PetscCall(PetscSFView(mdn->Mvctx, viewer)); 7183ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 719fb9695e5SSatish Balay } else if (format == PETSC_VIEWER_ASCII_INFO) { 7203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7218965ea79SLois Curfman McInnes } 722f1af5d2fSBarry Smith } else if (isdraw) { 723b0a32e0cSBarry Smith PetscDraw draw; 724ace3abfcSBarry Smith PetscBool isnull; 725f1af5d2fSBarry Smith 7269566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawGetDraw(viewer, 0, &draw)); 7279566063dSJacob Faibussowitsch PetscCall(PetscDrawIsNull(draw, &isnull)); 7283ba16761SJacob Faibussowitsch if (isnull) PetscFunctionReturn(PETSC_SUCCESS); 729f1af5d2fSBarry Smith } 73077ed5343SBarry Smith 7317da1fb6eSBarry Smith { 7328965ea79SLois Curfman McInnes /* assemble the entire matrix onto first processor. */ 7338965ea79SLois Curfman McInnes Mat A; 734d0f46423SBarry Smith PetscInt M = mat->rmap->N, N = mat->cmap->N, m, row, i, nz; 735ba8c8a56SBarry Smith PetscInt *cols; 736ba8c8a56SBarry Smith PetscScalar *vals; 7378965ea79SLois Curfman McInnes 7389566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)mat), &A)); 739dd400576SPatrick Sanan if (rank == 0) { 7409566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, M, N, M, N)); 7413a40ed3dSBarry Smith } else { 7429566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, 0, 0, M, N)); 7438965ea79SLois Curfman McInnes } 7447adad957SLisandro Dalcin /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */ 7459566063dSJacob Faibussowitsch PetscCall(MatSetType(A, MATMPIDENSE)); 7469566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 7478965ea79SLois Curfman McInnes 74839ddd567SLois Curfman McInnes /* Copy the matrix ... This isn't the most efficient means, 74939ddd567SLois Curfman McInnes but it's quick for now */ 75051022da4SBarry Smith A->insertmode = INSERT_VALUES; 7512205254eSKarl Rupp 7522205254eSKarl Rupp row = mat->rmap->rstart; 7532205254eSKarl Rupp m = mdn->A->rmap->n; 7548965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 7559566063dSJacob Faibussowitsch PetscCall(MatGetRow_MPIDense(mat, row, &nz, &cols, &vals)); 7569566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(A, 1, &row, nz, cols, vals, INSERT_VALUES)); 7579566063dSJacob Faibussowitsch PetscCall(MatRestoreRow_MPIDense(mat, row, &nz, &cols, &vals)); 75839ddd567SLois Curfman McInnes row++; 7598965ea79SLois Curfman McInnes } 7608965ea79SLois Curfman McInnes 7619566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY)); 7629566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY)); 7639566063dSJacob Faibussowitsch PetscCall(PetscViewerGetSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 764dd400576SPatrick Sanan if (rank == 0) { 765*f4f49eeaSPierre Jolivet PetscCall(PetscObjectSetName((PetscObject)((Mat_MPIDense *)A->data)->A, ((PetscObject)mat)->name)); 766*f4f49eeaSPierre Jolivet PetscCall(MatView_SeqDense(((Mat_MPIDense *)A->data)->A, sviewer)); 7678965ea79SLois Curfman McInnes } 7689566063dSJacob Faibussowitsch PetscCall(PetscViewerRestoreSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 7699566063dSJacob Faibussowitsch PetscCall(MatDestroy(&A)); 7708965ea79SLois Curfman McInnes } 7713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7728965ea79SLois Curfman McInnes } 7738965ea79SLois Curfman McInnes 77466976f2fSJacob Faibussowitsch static PetscErrorCode MatView_MPIDense(Mat mat, PetscViewer viewer) 775d71ae5a4SJacob Faibussowitsch { 776ace3abfcSBarry Smith PetscBool iascii, isbinary, isdraw, issocket; 7778965ea79SLois Curfman McInnes 778433994e6SBarry Smith PetscFunctionBegin; 7799566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 7809566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 7819566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSOCKET, &issocket)); 7829566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 7830f5bd95cSBarry Smith 78432077d6dSBarry Smith if (iascii || issocket || isdraw) { 7859566063dSJacob Faibussowitsch PetscCall(MatView_MPIDense_ASCIIorDraworSocket(mat, viewer)); 7861baa6e33SBarry Smith } else if (isbinary) PetscCall(MatView_Dense_Binary(mat, viewer)); 7873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7888965ea79SLois Curfman McInnes } 7898965ea79SLois Curfman McInnes 79066976f2fSJacob Faibussowitsch static PetscErrorCode MatGetInfo_MPIDense(Mat A, MatInfoType flag, MatInfo *info) 791d71ae5a4SJacob Faibussowitsch { 7923501a2bdSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 7933501a2bdSLois Curfman McInnes Mat mdn = mat->A; 7943966268fSBarry Smith PetscLogDouble isend[5], irecv[5]; 7958965ea79SLois Curfman McInnes 7963a40ed3dSBarry Smith PetscFunctionBegin; 7974e220ebcSLois Curfman McInnes info->block_size = 1.0; 7982205254eSKarl Rupp 7999566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mdn, MAT_LOCAL, info)); 8002205254eSKarl Rupp 8019371c9d4SSatish Balay isend[0] = info->nz_used; 8029371c9d4SSatish Balay isend[1] = info->nz_allocated; 8039371c9d4SSatish Balay isend[2] = info->nz_unneeded; 8049371c9d4SSatish Balay isend[3] = info->memory; 8059371c9d4SSatish Balay isend[4] = info->mallocs; 8068965ea79SLois Curfman McInnes if (flag == MAT_LOCAL) { 8074e220ebcSLois Curfman McInnes info->nz_used = isend[0]; 8084e220ebcSLois Curfman McInnes info->nz_allocated = isend[1]; 8094e220ebcSLois Curfman McInnes info->nz_unneeded = isend[2]; 8104e220ebcSLois Curfman McInnes info->memory = isend[3]; 8114e220ebcSLois Curfman McInnes info->mallocs = isend[4]; 8128965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_MAX) { 8131c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_MAX, PetscObjectComm((PetscObject)A))); 8142205254eSKarl Rupp 8154e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 8164e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 8174e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 8184e220ebcSLois Curfman McInnes info->memory = irecv[3]; 8194e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 8208965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_SUM) { 8211c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_SUM, PetscObjectComm((PetscObject)A))); 8222205254eSKarl Rupp 8234e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 8244e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 8254e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 8264e220ebcSLois Curfman McInnes info->memory = irecv[3]; 8274e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 8288965ea79SLois Curfman McInnes } 8294e220ebcSLois Curfman McInnes info->fill_ratio_given = 0; /* no parallel LU/ILU/Cholesky */ 8304e220ebcSLois Curfman McInnes info->fill_ratio_needed = 0; 8314e220ebcSLois Curfman McInnes info->factor_mallocs = 0; 8323ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8338965ea79SLois Curfman McInnes } 8348965ea79SLois Curfman McInnes 83566976f2fSJacob Faibussowitsch static PetscErrorCode MatSetOption_MPIDense(Mat A, MatOption op, PetscBool flg) 836d71ae5a4SJacob Faibussowitsch { 83739ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 8388965ea79SLois Curfman McInnes 8393a40ed3dSBarry Smith PetscFunctionBegin; 84012c028f9SKris Buschelman switch (op) { 841512a5fc5SBarry Smith case MAT_NEW_NONZERO_LOCATIONS: 84212c028f9SKris Buschelman case MAT_NEW_NONZERO_LOCATION_ERR: 84312c028f9SKris Buschelman case MAT_NEW_NONZERO_ALLOCATION_ERR: 84443674050SBarry Smith MatCheckPreallocated(A, 1); 8459566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 84612c028f9SKris Buschelman break; 84712c028f9SKris Buschelman case MAT_ROW_ORIENTED: 84843674050SBarry Smith MatCheckPreallocated(A, 1); 8494e0d8c25SBarry Smith a->roworiented = flg; 8509566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 85112c028f9SKris Buschelman break; 8528c78258cSHong Zhang case MAT_FORCE_DIAGONAL_ENTRIES: 85313fa8e87SLisandro Dalcin case MAT_KEEP_NONZERO_PATTERN: 85412c028f9SKris Buschelman case MAT_USE_HASH_TABLE: 855d71ae5a4SJacob Faibussowitsch case MAT_SORTED_FULL: 856d71ae5a4SJacob Faibussowitsch PetscCall(PetscInfo(A, "Option %s ignored\n", MatOptions[op])); 857d71ae5a4SJacob Faibussowitsch break; 858d71ae5a4SJacob Faibussowitsch case MAT_IGNORE_OFF_PROC_ENTRIES: 859d71ae5a4SJacob Faibussowitsch a->donotstash = flg; 860d71ae5a4SJacob Faibussowitsch break; 86177e54ba9SKris Buschelman case MAT_SYMMETRIC: 86277e54ba9SKris Buschelman case MAT_STRUCTURALLY_SYMMETRIC: 8639a4540c5SBarry Smith case MAT_HERMITIAN: 8649a4540c5SBarry Smith case MAT_SYMMETRY_ETERNAL: 865b94d7dedSBarry Smith case MAT_STRUCTURAL_SYMMETRY_ETERNAL: 866b94d7dedSBarry Smith case MAT_SPD: 867600fe468SBarry Smith case MAT_IGNORE_LOWER_TRIANGULAR: 8685d7aebe8SStefano Zampini case MAT_IGNORE_ZERO_ENTRIES: 869b94d7dedSBarry Smith case MAT_SPD_ETERNAL: 870b94d7dedSBarry Smith /* if the diagonal matrix is square it inherits some of the properties above */ 8719566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Option %s ignored\n", MatOptions[op])); 87277e54ba9SKris Buschelman break; 873d71ae5a4SJacob Faibussowitsch default: 874d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "unknown option %s", MatOptions[op]); 8753a40ed3dSBarry Smith } 8763ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8778965ea79SLois Curfman McInnes } 8788965ea79SLois Curfman McInnes 87966976f2fSJacob Faibussowitsch static PetscErrorCode MatDiagonalScale_MPIDense(Mat A, Vec ll, Vec rr) 880d71ae5a4SJacob Faibussowitsch { 8815b2fa520SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 882637a0070SStefano Zampini const PetscScalar *l; 883637a0070SStefano Zampini PetscScalar x, *v, *vv, *r; 884637a0070SStefano Zampini PetscInt i, j, s2a, s3a, s2, s3, m = mdn->A->rmap->n, n = mdn->A->cmap->n, lda; 8855b2fa520SLois Curfman McInnes 8865b2fa520SLois Curfman McInnes PetscFunctionBegin; 8879566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(mdn->A, &vv)); 8889566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mdn->A, &lda)); 8899566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &s2, &s3)); 8905b2fa520SLois Curfman McInnes if (ll) { 8919566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(ll, &s2a)); 89208401ef6SPierre Jolivet PetscCheck(s2a == s2, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Left scaling vector non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT, s2a, s2); 8939566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(ll, &l)); 8945b2fa520SLois Curfman McInnes for (i = 0; i < m; i++) { 8955b2fa520SLois Curfman McInnes x = l[i]; 896637a0070SStefano Zampini v = vv + i; 8979371c9d4SSatish Balay for (j = 0; j < n; j++) { 8989371c9d4SSatish Balay (*v) *= x; 8999371c9d4SSatish Balay v += lda; 9009371c9d4SSatish Balay } 9015b2fa520SLois Curfman McInnes } 9029566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(ll, &l)); 9039566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 9045b2fa520SLois Curfman McInnes } 9055b2fa520SLois Curfman McInnes if (rr) { 906637a0070SStefano Zampini const PetscScalar *ar; 907637a0070SStefano Zampini 9089566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(rr, &s3a)); 90908401ef6SPierre Jolivet PetscCheck(s3a == s3, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Right scaling vec non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT ".", s3a, s3); 9109566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(rr, &ar)); 9116f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 9129566063dSJacob Faibussowitsch PetscCall(VecGetArray(mdn->lvec, &r)); 9139566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 9149566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 9159566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(rr, &ar)); 9165b2fa520SLois Curfman McInnes for (i = 0; i < n; i++) { 9175b2fa520SLois Curfman McInnes x = r[i]; 918637a0070SStefano Zampini v = vv + i * lda; 9192205254eSKarl Rupp for (j = 0; j < m; j++) (*v++) *= x; 9205b2fa520SLois Curfman McInnes } 9219566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(mdn->lvec, &r)); 9229566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 9235b2fa520SLois Curfman McInnes } 9249566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(mdn->A, &vv)); 9253ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9265b2fa520SLois Curfman McInnes } 9275b2fa520SLois Curfman McInnes 92866976f2fSJacob Faibussowitsch static PetscErrorCode MatNorm_MPIDense(Mat A, NormType type, PetscReal *nrm) 929d71ae5a4SJacob Faibussowitsch { 9303501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 93113f74950SBarry Smith PetscInt i, j; 932616b8fbbSStefano Zampini PetscMPIInt size; 933329f5518SBarry Smith PetscReal sum = 0.0; 934637a0070SStefano Zampini const PetscScalar *av, *v; 9353501a2bdSLois Curfman McInnes 9363a40ed3dSBarry Smith PetscFunctionBegin; 9379566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, &av)); 938637a0070SStefano Zampini v = av; 9399566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 940616b8fbbSStefano Zampini if (size == 1) { 9419566063dSJacob Faibussowitsch PetscCall(MatNorm(mdn->A, type, nrm)); 9423501a2bdSLois Curfman McInnes } else { 9433501a2bdSLois Curfman McInnes if (type == NORM_FROBENIUS) { 944d0f46423SBarry Smith for (i = 0; i < mdn->A->cmap->n * mdn->A->rmap->n; i++) { 9459371c9d4SSatish Balay sum += PetscRealPart(PetscConj(*v) * (*v)); 9469371c9d4SSatish Balay v++; 9473501a2bdSLois Curfman McInnes } 9481c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(&sum, nrm, 1, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 9498f1a2a5eSBarry Smith *nrm = PetscSqrtReal(*nrm); 9509566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * mdn->A->cmap->n * mdn->A->rmap->n)); 9513a40ed3dSBarry Smith } else if (type == NORM_1) { 952329f5518SBarry Smith PetscReal *tmp, *tmp2; 9539566063dSJacob Faibussowitsch PetscCall(PetscCalloc2(A->cmap->N, &tmp, A->cmap->N, &tmp2)); 954064f8208SBarry Smith *nrm = 0.0; 955637a0070SStefano Zampini v = av; 956d0f46423SBarry Smith for (j = 0; j < mdn->A->cmap->n; j++) { 957d0f46423SBarry Smith for (i = 0; i < mdn->A->rmap->n; i++) { 9589371c9d4SSatish Balay tmp[j] += PetscAbsScalar(*v); 9599371c9d4SSatish Balay v++; 9603501a2bdSLois Curfman McInnes } 9613501a2bdSLois Curfman McInnes } 9621c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(tmp, tmp2, A->cmap->N, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 963d0f46423SBarry Smith for (j = 0; j < A->cmap->N; j++) { 964064f8208SBarry Smith if (tmp2[j] > *nrm) *nrm = tmp2[j]; 9653501a2bdSLois Curfman McInnes } 9669566063dSJacob Faibussowitsch PetscCall(PetscFree2(tmp, tmp2)); 9679566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(A->cmap->n * A->rmap->n)); 9683a40ed3dSBarry Smith } else if (type == NORM_INFINITY) { /* max row norm */ 969329f5518SBarry Smith PetscReal ntemp; 9709566063dSJacob Faibussowitsch PetscCall(MatNorm(mdn->A, type, &ntemp)); 9711c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(&ntemp, nrm, 1, MPIU_REAL, MPIU_MAX, PetscObjectComm((PetscObject)A))); 972ce94432eSBarry Smith } else SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "No support for two norm"); 9733501a2bdSLois Curfman McInnes } 9749566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, &av)); 9753ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9763501a2bdSLois Curfman McInnes } 9773501a2bdSLois Curfman McInnes 97866976f2fSJacob Faibussowitsch static PetscErrorCode MatTranspose_MPIDense(Mat A, MatReuse reuse, Mat *matout) 979d71ae5a4SJacob Faibussowitsch { 9803501a2bdSLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 9813501a2bdSLois Curfman McInnes Mat B; 982d0f46423SBarry Smith PetscInt M = A->rmap->N, N = A->cmap->N, m, n, *rwork, rstart = A->rmap->rstart; 983637a0070SStefano Zampini PetscInt j, i, lda; 98487828ca2SBarry Smith PetscScalar *v; 9853501a2bdSLois Curfman McInnes 9863a40ed3dSBarry Smith PetscFunctionBegin; 9877fb60732SBarry Smith if (reuse == MAT_REUSE_MATRIX) PetscCall(MatTransposeCheckNonzeroState_Private(A, *matout)); 988cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) { 9899566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 9909566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->cmap->n, A->rmap->n, N, M)); 9919566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)A)->type_name)); 9929566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(B, NULL)); 993637a0070SStefano Zampini } else B = *matout; 9943501a2bdSLois Curfman McInnes 9959371c9d4SSatish Balay m = a->A->rmap->n; 9969371c9d4SSatish Balay n = a->A->cmap->n; 9979566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)&v)); 9989566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 9999566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m, &rwork)); 10003501a2bdSLois Curfman McInnes for (i = 0; i < m; i++) rwork[i] = rstart + i; 10011acff37aSSatish Balay for (j = 0; j < n; j++) { 10029566063dSJacob Faibussowitsch PetscCall(MatSetValues(B, 1, &j, m, rwork, v, INSERT_VALUES)); 10038e3a54c0SPierre Jolivet v = PetscSafePointerPlusOffset(v, lda); 10043501a2bdSLois Curfman McInnes } 10059566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)&v)); 10069566063dSJacob Faibussowitsch PetscCall(PetscFree(rwork)); 10079566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY)); 10089566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY)); 1009cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) { 10103501a2bdSLois Curfman McInnes *matout = B; 10113501a2bdSLois Curfman McInnes } else { 10129566063dSJacob Faibussowitsch PetscCall(MatHeaderMerge(A, &B)); 10133501a2bdSLois Curfman McInnes } 10143ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1015096963f5SLois Curfman McInnes } 1016096963f5SLois Curfman McInnes 10176849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat, MatDuplicateOption, Mat *); 101852c5f739Sprj- PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat, PetscScalar); 10198965ea79SLois Curfman McInnes 102066976f2fSJacob Faibussowitsch static PetscErrorCode MatSetUp_MPIDense(Mat A) 1021d71ae5a4SJacob Faibussowitsch { 1022273d9f13SBarry Smith PetscFunctionBegin; 10239566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 10249566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 102548a46eb9SPierre Jolivet if (!A->preallocated) PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 10263ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1027273d9f13SBarry Smith } 1028273d9f13SBarry Smith 102966976f2fSJacob Faibussowitsch static PetscErrorCode MatAXPY_MPIDense(Mat Y, PetscScalar alpha, Mat X, MatStructure str) 1030d71ae5a4SJacob Faibussowitsch { 1031488007eeSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)Y->data, *B = (Mat_MPIDense *)X->data; 1032488007eeSBarry Smith 1033488007eeSBarry Smith PetscFunctionBegin; 10349566063dSJacob Faibussowitsch PetscCall(MatAXPY(A->A, alpha, B->A, str)); 10353ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1036488007eeSBarry Smith } 1037488007eeSBarry Smith 103866976f2fSJacob Faibussowitsch static PetscErrorCode MatConjugate_MPIDense(Mat mat) 1039d71ae5a4SJacob Faibussowitsch { 1040ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 1041ba337c44SJed Brown 1042ba337c44SJed Brown PetscFunctionBegin; 10439566063dSJacob Faibussowitsch PetscCall(MatConjugate(a->A)); 10443ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1045ba337c44SJed Brown } 1046ba337c44SJed Brown 104766976f2fSJacob Faibussowitsch static PetscErrorCode MatRealPart_MPIDense(Mat A) 1048d71ae5a4SJacob Faibussowitsch { 1049ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1050ba337c44SJed Brown 1051ba337c44SJed Brown PetscFunctionBegin; 10529566063dSJacob Faibussowitsch PetscCall(MatRealPart(a->A)); 10533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1054ba337c44SJed Brown } 1055ba337c44SJed Brown 105666976f2fSJacob Faibussowitsch static PetscErrorCode MatImaginaryPart_MPIDense(Mat A) 1057d71ae5a4SJacob Faibussowitsch { 1058ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1059ba337c44SJed Brown 1060ba337c44SJed Brown PetscFunctionBegin; 10619566063dSJacob Faibussowitsch PetscCall(MatImaginaryPart(a->A)); 10623ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1063ba337c44SJed Brown } 1064ba337c44SJed Brown 1065d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetColumnVector_MPIDense(Mat A, Vec v, PetscInt col) 1066d71ae5a4SJacob Faibussowitsch { 1067637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 106849a6ff4bSBarry Smith 106949a6ff4bSBarry Smith PetscFunctionBegin; 107028b400f6SJacob Faibussowitsch PetscCheck(a->A, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing local matrix"); 107128b400f6SJacob Faibussowitsch PetscCheck(a->A->ops->getcolumnvector, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing get column operation"); 10729566063dSJacob Faibussowitsch PetscCall((*a->A->ops->getcolumnvector)(a->A, v, col)); 10733ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 107449a6ff4bSBarry Smith } 107549a6ff4bSBarry Smith 1076857cbf51SRichard Tran Mills PETSC_INTERN PetscErrorCode MatGetColumnReductions_SeqDense(Mat, PetscInt, PetscReal *); 107752c5f739Sprj- 107866976f2fSJacob Faibussowitsch static PetscErrorCode MatGetColumnReductions_MPIDense(Mat A, PetscInt type, PetscReal *reductions) 1079d71ae5a4SJacob Faibussowitsch { 1080a873a8cdSSam Reynolds PetscInt i, m, n; 10810716a85fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 10820716a85fSBarry Smith PetscReal *work; 10830716a85fSBarry Smith 10840716a85fSBarry Smith PetscFunctionBegin; 10859566063dSJacob Faibussowitsch PetscCall(MatGetSize(A, &m, &n)); 10869566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &work)); 1087857cbf51SRichard Tran Mills if (type == REDUCTION_MEAN_REALPART) { 10889566063dSJacob Faibussowitsch PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_REALPART, work)); 1089857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_IMAGINARYPART) { 10909566063dSJacob Faibussowitsch PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_IMAGINARYPART, work)); 1091a873a8cdSSam Reynolds } else { 10929566063dSJacob Faibussowitsch PetscCall(MatGetColumnReductions_SeqDense(a->A, type, work)); 1093a873a8cdSSam Reynolds } 1094857cbf51SRichard Tran Mills if (type == NORM_2) { 10950716a85fSBarry Smith for (i = 0; i < n; i++) work[i] *= work[i]; 10960716a85fSBarry Smith } 1097857cbf51SRichard Tran Mills if (type == NORM_INFINITY) { 10981c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(work, reductions, n, MPIU_REAL, MPIU_MAX, A->hdr.comm)); 10990716a85fSBarry Smith } else { 11001c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(work, reductions, n, MPIU_REAL, MPIU_SUM, A->hdr.comm)); 11010716a85fSBarry Smith } 11029566063dSJacob Faibussowitsch PetscCall(PetscFree(work)); 1103857cbf51SRichard Tran Mills if (type == NORM_2) { 1104a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] = PetscSqrtReal(reductions[i]); 1105857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_REALPART || type == REDUCTION_MEAN_IMAGINARYPART) { 1106a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] /= m; 11070716a85fSBarry Smith } 11083ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 11090716a85fSBarry Smith } 11100716a85fSBarry Smith 1111d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetRandom_MPIDense(Mat x, PetscRandom rctx) 1112d71ae5a4SJacob Faibussowitsch { 111373a71a0fSBarry Smith Mat_MPIDense *d = (Mat_MPIDense *)x->data; 111473a71a0fSBarry Smith 111573a71a0fSBarry Smith PetscFunctionBegin; 11169566063dSJacob Faibussowitsch PetscCall(MatSetRandom(d->A, rctx)); 11173faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 11183faff063SStefano Zampini x->offloadmask = d->A->offloadmask; 11193faff063SStefano Zampini #endif 11203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 112173a71a0fSBarry Smith } 112273a71a0fSBarry Smith 1123d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A, PetscBool *missing, PetscInt *d) 1124d71ae5a4SJacob Faibussowitsch { 11253b49f96aSBarry Smith PetscFunctionBegin; 11263b49f96aSBarry Smith *missing = PETSC_FALSE; 11273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 11283b49f96aSBarry Smith } 11293b49f96aSBarry Smith 11304222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1131cc48ffa7SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 11326718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1133a1f9a5e6SStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 11346718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat, Mat, PetscBool *); 11356718818eSStefano Zampini static PetscErrorCode MatLoad_MPIDense(Mat, PetscViewer); 11365d8c7819SPierre Jolivet static PetscErrorCode MatProductSetFromOptions_MPIDense(Mat); 1137cc48ffa7SToby Isaac 113809dc0095SBarry Smith static struct _MatOps MatOps_Values = {MatSetValues_MPIDense, 113909dc0095SBarry Smith MatGetRow_MPIDense, 114009dc0095SBarry Smith MatRestoreRow_MPIDense, 114109dc0095SBarry Smith MatMult_MPIDense, 114297304618SKris Buschelman /* 4*/ MatMultAdd_MPIDense, 11437c922b88SBarry Smith MatMultTranspose_MPIDense, 11447c922b88SBarry Smith MatMultTransposeAdd_MPIDense, 1145f4259b30SLisandro Dalcin NULL, 1146f4259b30SLisandro Dalcin NULL, 1147f4259b30SLisandro Dalcin NULL, 1148f4259b30SLisandro Dalcin /* 10*/ NULL, 1149f4259b30SLisandro Dalcin NULL, 1150f4259b30SLisandro Dalcin NULL, 1151f4259b30SLisandro Dalcin NULL, 115209dc0095SBarry Smith MatTranspose_MPIDense, 115397304618SKris Buschelman /* 15*/ MatGetInfo_MPIDense, 11546e4ee0c6SHong Zhang MatEqual_MPIDense, 115509dc0095SBarry Smith MatGetDiagonal_MPIDense, 11565b2fa520SLois Curfman McInnes MatDiagonalScale_MPIDense, 115709dc0095SBarry Smith MatNorm_MPIDense, 115897304618SKris Buschelman /* 20*/ MatAssemblyBegin_MPIDense, 115909dc0095SBarry Smith MatAssemblyEnd_MPIDense, 116009dc0095SBarry Smith MatSetOption_MPIDense, 116109dc0095SBarry Smith MatZeroEntries_MPIDense, 1162d519adbfSMatthew Knepley /* 24*/ MatZeroRows_MPIDense, 1163f4259b30SLisandro Dalcin NULL, 1164f4259b30SLisandro Dalcin NULL, 1165f4259b30SLisandro Dalcin NULL, 1166f4259b30SLisandro Dalcin NULL, 11674994cf47SJed Brown /* 29*/ MatSetUp_MPIDense, 1168f4259b30SLisandro Dalcin NULL, 1169f4259b30SLisandro Dalcin NULL, 1170c56a70eeSBarry Smith MatGetDiagonalBlock_MPIDense, 1171f4259b30SLisandro Dalcin NULL, 1172d519adbfSMatthew Knepley /* 34*/ MatDuplicate_MPIDense, 1173f4259b30SLisandro Dalcin NULL, 1174f4259b30SLisandro Dalcin NULL, 1175f4259b30SLisandro Dalcin NULL, 1176f4259b30SLisandro Dalcin NULL, 1177d519adbfSMatthew Knepley /* 39*/ MatAXPY_MPIDense, 11787dae84e0SHong Zhang MatCreateSubMatrices_MPIDense, 1179f4259b30SLisandro Dalcin NULL, 118009dc0095SBarry Smith MatGetValues_MPIDense, 1181a76f77c3SStefano Zampini MatCopy_MPIDense, 1182f4259b30SLisandro Dalcin /* 44*/ NULL, 118309dc0095SBarry Smith MatScale_MPIDense, 11842f605a99SJose E. Roman MatShift_MPIDense, 1185f4259b30SLisandro Dalcin NULL, 1186f4259b30SLisandro Dalcin NULL, 118773a71a0fSBarry Smith /* 49*/ MatSetRandom_MPIDense, 1188f4259b30SLisandro Dalcin NULL, 1189f4259b30SLisandro Dalcin NULL, 1190f4259b30SLisandro Dalcin NULL, 1191f4259b30SLisandro Dalcin NULL, 1192f4259b30SLisandro Dalcin /* 54*/ NULL, 1193f4259b30SLisandro Dalcin NULL, 1194f4259b30SLisandro Dalcin NULL, 1195f4259b30SLisandro Dalcin NULL, 1196f4259b30SLisandro Dalcin NULL, 11977dae84e0SHong Zhang /* 59*/ MatCreateSubMatrix_MPIDense, 1198b9b97703SBarry Smith MatDestroy_MPIDense, 1199b9b97703SBarry Smith MatView_MPIDense, 1200f4259b30SLisandro Dalcin NULL, 1201f4259b30SLisandro Dalcin NULL, 1202f4259b30SLisandro Dalcin /* 64*/ NULL, 1203f4259b30SLisandro Dalcin NULL, 1204f4259b30SLisandro Dalcin NULL, 1205f4259b30SLisandro Dalcin NULL, 1206f4259b30SLisandro Dalcin NULL, 1207f4259b30SLisandro Dalcin /* 69*/ NULL, 1208f4259b30SLisandro Dalcin NULL, 1209f4259b30SLisandro Dalcin NULL, 1210f4259b30SLisandro Dalcin NULL, 1211f4259b30SLisandro Dalcin NULL, 1212f4259b30SLisandro Dalcin /* 74*/ NULL, 1213f4259b30SLisandro Dalcin NULL, 1214f4259b30SLisandro Dalcin NULL, 1215f4259b30SLisandro Dalcin NULL, 1216f4259b30SLisandro Dalcin NULL, 1217f4259b30SLisandro Dalcin /* 79*/ NULL, 1218f4259b30SLisandro Dalcin NULL, 1219f4259b30SLisandro Dalcin NULL, 1220f4259b30SLisandro Dalcin NULL, 12215bba2384SShri Abhyankar /* 83*/ MatLoad_MPIDense, 1222f4259b30SLisandro Dalcin NULL, 1223f4259b30SLisandro Dalcin NULL, 1224f4259b30SLisandro Dalcin NULL, 1225f4259b30SLisandro Dalcin NULL, 1226f4259b30SLisandro Dalcin NULL, 1227f4259b30SLisandro Dalcin /* 89*/ NULL, 1228f4259b30SLisandro Dalcin NULL, 1229f4259b30SLisandro Dalcin NULL, 1230f4259b30SLisandro Dalcin NULL, 1231f4259b30SLisandro Dalcin NULL, 1232f4259b30SLisandro Dalcin /* 94*/ NULL, 1233f4259b30SLisandro Dalcin NULL, 12346718818eSStefano Zampini MatMatTransposeMultSymbolic_MPIDense_MPIDense, 1235cc48ffa7SToby Isaac MatMatTransposeMultNumeric_MPIDense_MPIDense, 1236f4259b30SLisandro Dalcin NULL, 12374222ddf1SHong Zhang /* 99*/ MatProductSetFromOptions_MPIDense, 1238f4259b30SLisandro Dalcin NULL, 1239f4259b30SLisandro Dalcin NULL, 1240ba337c44SJed Brown MatConjugate_MPIDense, 1241f4259b30SLisandro Dalcin NULL, 1242f4259b30SLisandro Dalcin /*104*/ NULL, 1243ba337c44SJed Brown MatRealPart_MPIDense, 1244ba337c44SJed Brown MatImaginaryPart_MPIDense, 1245f4259b30SLisandro Dalcin NULL, 1246f4259b30SLisandro Dalcin NULL, 1247f4259b30SLisandro Dalcin /*109*/ NULL, 1248f4259b30SLisandro Dalcin NULL, 1249f4259b30SLisandro Dalcin NULL, 125049a6ff4bSBarry Smith MatGetColumnVector_MPIDense, 12513b49f96aSBarry Smith MatMissingDiagonal_MPIDense, 1252f4259b30SLisandro Dalcin /*114*/ NULL, 1253f4259b30SLisandro Dalcin NULL, 1254f4259b30SLisandro Dalcin NULL, 1255f4259b30SLisandro Dalcin NULL, 1256f4259b30SLisandro Dalcin NULL, 1257f4259b30SLisandro Dalcin /*119*/ NULL, 1258f4259b30SLisandro Dalcin NULL, 1259459e8d23SBlanca Mellado Pinto MatMultHermitianTranspose_MPIDense, 1260459e8d23SBlanca Mellado Pinto MatMultHermitianTransposeAdd_MPIDense, 1261f4259b30SLisandro Dalcin NULL, 1262f4259b30SLisandro Dalcin /*124*/ NULL, 1263a873a8cdSSam Reynolds MatGetColumnReductions_MPIDense, 1264f4259b30SLisandro Dalcin NULL, 1265f4259b30SLisandro Dalcin NULL, 1266f4259b30SLisandro Dalcin NULL, 1267f4259b30SLisandro Dalcin /*129*/ NULL, 1268f4259b30SLisandro Dalcin NULL, 12696718818eSStefano Zampini MatTransposeMatMultSymbolic_MPIDense_MPIDense, 1270cb20be35SHong Zhang MatTransposeMatMultNumeric_MPIDense_MPIDense, 1271f4259b30SLisandro Dalcin NULL, 1272f4259b30SLisandro Dalcin /*134*/ NULL, 1273f4259b30SLisandro Dalcin NULL, 1274f4259b30SLisandro Dalcin NULL, 1275f4259b30SLisandro Dalcin NULL, 1276f4259b30SLisandro Dalcin NULL, 1277f4259b30SLisandro Dalcin /*139*/ NULL, 1278f4259b30SLisandro Dalcin NULL, 1279f4259b30SLisandro Dalcin NULL, 1280f4259b30SLisandro Dalcin NULL, 1281f4259b30SLisandro Dalcin NULL, 12824222ddf1SHong Zhang MatCreateMPIMatConcatenateSeqMat_MPIDense, 1283f4259b30SLisandro Dalcin /*145*/ NULL, 1284f4259b30SLisandro Dalcin NULL, 128599a7f59eSMark Adams NULL, 128699a7f59eSMark Adams NULL, 12877fb60732SBarry Smith NULL, 1288dec0b466SHong Zhang /*150*/ NULL, 1289eede4a3fSMark Adams NULL, 1290dec0b466SHong Zhang NULL}; 12918965ea79SLois Curfman McInnes 129266976f2fSJacob Faibussowitsch static PetscErrorCode MatMPIDenseSetPreallocation_MPIDense(Mat mat, PetscScalar *data) 1293d71ae5a4SJacob Faibussowitsch { 1294637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 129547d993e7Ssuyashtn MatType mtype = MATSEQDENSE; 1296a23d5eceSKris Buschelman 1297a23d5eceSKris Buschelman PetscFunctionBegin; 129828b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 12999566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->rmap)); 13009566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->cmap)); 1301637a0070SStefano Zampini if (!a->A) { 13029566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 13039566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, mat->rmap->n, mat->cmap->N, mat->rmap->n, mat->cmap->N)); 1304637a0070SStefano Zampini } 130547d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) 130647d993e7Ssuyashtn PetscBool iscuda; 13079566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSECUDA, &iscuda)); 130847d993e7Ssuyashtn if (iscuda) mtype = MATSEQDENSECUDA; 130947d993e7Ssuyashtn #endif 131047d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 131147d993e7Ssuyashtn PetscBool iship; 131247d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSEHIP, &iship)); 131347d993e7Ssuyashtn if (iship) mtype = MATSEQDENSEHIP; 131447d993e7Ssuyashtn #endif 131547d993e7Ssuyashtn PetscCall(MatSetType(a->A, mtype)); 13169566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(a->A, data)); 131747d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 13183faff063SStefano Zampini mat->offloadmask = a->A->offloadmask; 13193faff063SStefano Zampini #endif 1320637a0070SStefano Zampini mat->preallocated = PETSC_TRUE; 13216f08ad05SPierre Jolivet mat->assembled = PETSC_TRUE; 13223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1323a23d5eceSKris Buschelman } 1324a23d5eceSKris Buschelman 1325d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIDense(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1326d71ae5a4SJacob Faibussowitsch { 13274e29119aSPierre Jolivet Mat B, C; 13284e29119aSPierre Jolivet 13294e29119aSPierre Jolivet PetscFunctionBegin; 13309566063dSJacob Faibussowitsch PetscCall(MatMPIAIJGetLocalMat(A, MAT_INITIAL_MATRIX, &C)); 13319566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqAIJ_SeqDense(C, MATSEQDENSE, MAT_INITIAL_MATRIX, &B)); 13329566063dSJacob Faibussowitsch PetscCall(MatDestroy(&C)); 13334e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 13344e29119aSPierre Jolivet C = *newmat; 13354e29119aSPierre Jolivet } else C = NULL; 13369566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 13379566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 13384e29119aSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) { 13399566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &C)); 13404e29119aSPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 13413ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 13424e29119aSPierre Jolivet } 13434e29119aSPierre Jolivet 134466976f2fSJacob Faibussowitsch static PetscErrorCode MatConvert_MPIDense_MPIAIJ(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1345d71ae5a4SJacob Faibussowitsch { 13464e29119aSPierre Jolivet Mat B, C; 13474e29119aSPierre Jolivet 13484e29119aSPierre Jolivet PetscFunctionBegin; 13499566063dSJacob Faibussowitsch PetscCall(MatDenseGetLocalMatrix(A, &C)); 13509566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqDense_SeqAIJ(C, MATSEQAIJ, MAT_INITIAL_MATRIX, &B)); 13514e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 13524e29119aSPierre Jolivet C = *newmat; 13534e29119aSPierre Jolivet } else C = NULL; 13549566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 13559566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 13564e29119aSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) { 13579566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &C)); 13584e29119aSPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 13593ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 13604e29119aSPierre Jolivet } 13614e29119aSPierre Jolivet 136265b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 1363d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1364d71ae5a4SJacob Faibussowitsch { 1365f709e8d7SPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 13668ea901baSHong Zhang Mat mat_elemental; 136732d7a744SHong Zhang PetscScalar *v; 1368f709e8d7SPierre Jolivet PetscInt m = A->rmap->n, N = A->cmap->N, rstart = A->rmap->rstart, i, *rows, *cols, lda; 13698ea901baSHong Zhang 13708baccfbdSHong Zhang PetscFunctionBegin; 1371378336b6SHong Zhang if (reuse == MAT_REUSE_MATRIX) { 1372378336b6SHong Zhang mat_elemental = *newmat; 13739566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(*newmat)); 1374378336b6SHong Zhang } else { 13759566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental)); 13769566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat_elemental, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 13779566063dSJacob Faibussowitsch PetscCall(MatSetType(mat_elemental, MATELEMENTAL)); 13789566063dSJacob Faibussowitsch PetscCall(MatSetUp(mat_elemental)); 13799566063dSJacob Faibussowitsch PetscCall(MatSetOption(mat_elemental, MAT_ROW_ORIENTED, PETSC_FALSE)); 1380378336b6SHong Zhang } 1381378336b6SHong Zhang 13829566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(m, &rows, N, &cols)); 138332d7a744SHong Zhang for (i = 0; i < N; i++) cols[i] = i; 138432d7a744SHong Zhang for (i = 0; i < m; i++) rows[i] = rstart + i; 13858ea901baSHong Zhang 1386637a0070SStefano Zampini /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */ 13879566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(A, &v)); 1388f709e8d7SPierre Jolivet PetscCall(MatDenseGetLDA(a->A, &lda)); 1389f709e8d7SPierre Jolivet if (lda == m) PetscCall(MatSetValues(mat_elemental, m, rows, N, cols, v, ADD_VALUES)); 1390f709e8d7SPierre Jolivet else { 1391f709e8d7SPierre Jolivet for (i = 0; i < N; i++) PetscCall(MatSetValues(mat_elemental, m, rows, 1, &i, v + lda * i, ADD_VALUES)); 1392f709e8d7SPierre Jolivet } 13939566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY)); 13949566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY)); 13959566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(A, &v)); 13969566063dSJacob Faibussowitsch PetscCall(PetscFree2(rows, cols)); 13978ea901baSHong Zhang 1398511c6705SHong Zhang if (reuse == MAT_INPLACE_MATRIX) { 13999566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &mat_elemental)); 14008ea901baSHong Zhang } else { 14018ea901baSHong Zhang *newmat = mat_elemental; 14028ea901baSHong Zhang } 14033ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14048baccfbdSHong Zhang } 140565b80a83SHong Zhang #endif 14068baccfbdSHong Zhang 1407d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A, PetscInt col, PetscScalar **vals) 1408d71ae5a4SJacob Faibussowitsch { 140986aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 141086aefd0dSHong Zhang 141186aefd0dSHong Zhang PetscFunctionBegin; 14129566063dSJacob Faibussowitsch PetscCall(MatDenseGetColumn(mat->A, col, vals)); 14133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 141486aefd0dSHong Zhang } 141586aefd0dSHong Zhang 1416d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A, PetscScalar **vals) 1417d71ae5a4SJacob Faibussowitsch { 141886aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 141986aefd0dSHong Zhang 142086aefd0dSHong Zhang PetscFunctionBegin; 14219566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreColumn(mat->A, vals)); 14223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 142386aefd0dSHong Zhang } 142486aefd0dSHong Zhang 1425d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm, Mat inmat, PetscInt n, MatReuse scall, Mat *outmat) 1426d71ae5a4SJacob Faibussowitsch { 142794e2cb23SJakub Kruzik Mat_MPIDense *mat; 142894e2cb23SJakub Kruzik PetscInt m, nloc, N; 142994e2cb23SJakub Kruzik 143094e2cb23SJakub Kruzik PetscFunctionBegin; 14319566063dSJacob Faibussowitsch PetscCall(MatGetSize(inmat, &m, &N)); 14329566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(inmat, NULL, &nloc)); 143394e2cb23SJakub Kruzik if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */ 143494e2cb23SJakub Kruzik PetscInt sum; 143594e2cb23SJakub Kruzik 143648a46eb9SPierre Jolivet if (n == PETSC_DECIDE) PetscCall(PetscSplitOwnership(comm, &n, &N)); 143794e2cb23SJakub Kruzik /* Check sum(n) = N */ 14381c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(&n, &sum, 1, MPIU_INT, MPI_SUM, comm)); 143908401ef6SPierre Jolivet PetscCheck(sum == N, PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Sum of local columns %" PetscInt_FMT " != global columns %" PetscInt_FMT, sum, N); 144094e2cb23SJakub Kruzik 14419566063dSJacob Faibussowitsch PetscCall(MatCreateDense(comm, m, n, PETSC_DETERMINE, N, NULL, outmat)); 14429566063dSJacob Faibussowitsch PetscCall(MatSetOption(*outmat, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 144394e2cb23SJakub Kruzik } 144494e2cb23SJakub Kruzik 144594e2cb23SJakub Kruzik /* numeric phase */ 144694e2cb23SJakub Kruzik mat = (Mat_MPIDense *)(*outmat)->data; 14479566063dSJacob Faibussowitsch PetscCall(MatCopy(inmat, mat->A, SAME_NONZERO_PATTERN)); 14483ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 144994e2cb23SJakub Kruzik } 145094e2cb23SJakub Kruzik 1451d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) 1452d71ae5a4SJacob Faibussowitsch { 14536947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 14546947451fSStefano Zampini PetscInt lda; 14556947451fSStefano Zampini 14566947451fSStefano Zampini PetscFunctionBegin; 145728b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 145828b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1459d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 14606947451fSStefano Zampini a->vecinuse = col + 1; 14619566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 14629566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, (PetscScalar **)&a->ptrinuse)); 14638e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 14646947451fSStefano Zampini *v = a->cvec; 14653ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14666947451fSStefano Zampini } 14676947451fSStefano Zampini 1468d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) 1469d71ae5a4SJacob Faibussowitsch { 14706947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 14716947451fSStefano Zampini 14726947451fSStefano Zampini PetscFunctionBegin; 147328b400f6SJacob Faibussowitsch PetscCheck(a->vecinuse, PETSC_COMM_SELF, PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 147428b400f6SJacob Faibussowitsch PetscCheck(a->cvec, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Missing internal column vector"); 14756947451fSStefano Zampini a->vecinuse = 0; 14769566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, (PetscScalar **)&a->ptrinuse)); 14779566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1478742765d3SMatthew Knepley if (v) *v = NULL; 14793ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14806947451fSStefano Zampini } 14816947451fSStefano Zampini 1482d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) 1483d71ae5a4SJacob Faibussowitsch { 14846947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 14856947451fSStefano Zampini PetscInt lda; 14866947451fSStefano Zampini 14876947451fSStefano Zampini PetscFunctionBegin; 148828b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 148928b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1490d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 14916947451fSStefano Zampini a->vecinuse = col + 1; 14929566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 14939566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &a->ptrinuse)); 14948e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 14959566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(a->cvec)); 14966947451fSStefano Zampini *v = a->cvec; 14973ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14986947451fSStefano Zampini } 14996947451fSStefano Zampini 1500d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) 1501d71ae5a4SJacob Faibussowitsch { 15026947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15036947451fSStefano Zampini 15046947451fSStefano Zampini PetscFunctionBegin; 15055f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 15065f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 15076947451fSStefano Zampini a->vecinuse = 0; 15089566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &a->ptrinuse)); 15099566063dSJacob Faibussowitsch PetscCall(VecLockReadPop(a->cvec)); 15109566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1511742765d3SMatthew Knepley if (v) *v = NULL; 15123ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15136947451fSStefano Zampini } 15146947451fSStefano Zampini 1515d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) 1516d71ae5a4SJacob Faibussowitsch { 15176947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15186947451fSStefano Zampini PetscInt lda; 15196947451fSStefano Zampini 15206947451fSStefano Zampini PetscFunctionBegin; 15215f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 15225f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1523d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 15246947451fSStefano Zampini a->vecinuse = col + 1; 15259566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 15269566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 15278e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 15286947451fSStefano Zampini *v = a->cvec; 15293ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15306947451fSStefano Zampini } 15316947451fSStefano Zampini 1532d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) 1533d71ae5a4SJacob Faibussowitsch { 15346947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15356947451fSStefano Zampini 15366947451fSStefano Zampini PetscFunctionBegin; 15375f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 15385f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 15396947451fSStefano Zampini a->vecinuse = 0; 15409566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 15419566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1542742765d3SMatthew Knepley if (v) *v = NULL; 15433ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15446947451fSStefano Zampini } 15456947451fSStefano Zampini 154666976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseGetSubMatrix_MPIDense(Mat A, PetscInt rbegin, PetscInt rend, PetscInt cbegin, PetscInt cend, Mat *v) 1547d71ae5a4SJacob Faibussowitsch { 15485ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1549616b8fbbSStefano Zampini Mat_MPIDense *c; 1550616b8fbbSStefano Zampini MPI_Comm comm; 1551a2748737SPierre Jolivet PetscInt pbegin, pend; 15525ea7661aSPierre Jolivet 15535ea7661aSPierre Jolivet PetscFunctionBegin; 15549566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 15555f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 15565f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1557a2748737SPierre Jolivet pbegin = PetscMax(0, PetscMin(A->rmap->rend, rbegin) - A->rmap->rstart); 1558a2748737SPierre Jolivet pend = PetscMin(A->rmap->n, PetscMax(0, rend - A->rmap->rstart)); 15595ea7661aSPierre Jolivet if (!a->cmat) { 15609566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &a->cmat)); 15619566063dSJacob Faibussowitsch PetscCall(MatSetType(a->cmat, ((PetscObject)A)->type_name)); 1562a2748737SPierre Jolivet if (rend - rbegin == A->rmap->N) PetscCall(PetscLayoutReference(A->rmap, &a->cmat->rmap)); 1563a2748737SPierre Jolivet else { 1564a2748737SPierre Jolivet PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, pend - pbegin)); 1565a2748737SPierre Jolivet PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1566a2748737SPierre Jolivet PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1567a2748737SPierre Jolivet } 15689566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 15699566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 1570a2748737SPierre Jolivet } else { 1571a2748737SPierre Jolivet PetscBool same = (PetscBool)(rend - rbegin == a->cmat->rmap->N); 1572a2748737SPierre Jolivet if (same && a->cmat->rmap->N != A->rmap->N) { 1573a2748737SPierre Jolivet same = (PetscBool)(pend - pbegin == a->cmat->rmap->n); 1574a2748737SPierre Jolivet PetscCall(MPIU_Allreduce(MPI_IN_PLACE, &same, 1, MPIU_BOOL, MPI_LAND, PetscObjectComm((PetscObject)A))); 1575a2748737SPierre Jolivet } 1576a2748737SPierre Jolivet if (!same) { 1577a2748737SPierre Jolivet PetscCall(PetscLayoutDestroy(&a->cmat->rmap)); 1578a2748737SPierre Jolivet PetscCall(PetscLayoutCreate(comm, &a->cmat->rmap)); 1579a2748737SPierre Jolivet PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, pend - pbegin)); 1580a2748737SPierre Jolivet PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1581a2748737SPierre Jolivet PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1582a2748737SPierre Jolivet } 1583a2748737SPierre Jolivet if (cend - cbegin != a->cmat->cmap->N) { 15849566063dSJacob Faibussowitsch PetscCall(PetscLayoutDestroy(&a->cmat->cmap)); 15859566063dSJacob Faibussowitsch PetscCall(PetscLayoutCreate(comm, &a->cmat->cmap)); 15869566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 15879566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 15885ea7661aSPierre Jolivet } 1589a2748737SPierre Jolivet } 1590616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 15915f80ce2aSJacob Faibussowitsch PetscCheck(!c->A, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1592a2748737SPierre Jolivet PetscCall(MatDenseGetSubMatrix(a->A, pbegin, pend, cbegin, cend, &c->A)); 15933faff063SStefano Zampini 1594616b8fbbSStefano Zampini a->cmat->preallocated = PETSC_TRUE; 1595616b8fbbSStefano Zampini a->cmat->assembled = PETSC_TRUE; 15963faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 15973faff063SStefano Zampini a->cmat->offloadmask = c->A->offloadmask; 15983faff063SStefano Zampini #endif 15995ea7661aSPierre Jolivet a->matinuse = cbegin + 1; 16005ea7661aSPierre Jolivet *v = a->cmat; 16013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16025ea7661aSPierre Jolivet } 16035ea7661aSPierre Jolivet 160466976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat A, Mat *v) 1605d71ae5a4SJacob Faibussowitsch { 16065ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1607616b8fbbSStefano Zampini Mat_MPIDense *c; 16085ea7661aSPierre Jolivet 16095ea7661aSPierre Jolivet PetscFunctionBegin; 16105f80ce2aSJacob Faibussowitsch PetscCheck(a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetSubMatrix() first"); 16115f80ce2aSJacob Faibussowitsch PetscCheck(a->cmat, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal matrix"); 16125f80ce2aSJacob Faibussowitsch PetscCheck(*v == a->cmat, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Not the matrix obtained from MatDenseGetSubMatrix()"); 16135ea7661aSPierre Jolivet a->matinuse = 0; 1614616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 16159566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreSubMatrix(a->A, &c->A)); 1616742765d3SMatthew Knepley if (v) *v = NULL; 16173faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 16183faff063SStefano Zampini A->offloadmask = a->A->offloadmask; 16193faff063SStefano Zampini #endif 16203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16215ea7661aSPierre Jolivet } 16225ea7661aSPierre Jolivet 1623002bc6daSRichard Tran Mills /*MC 1624002bc6daSRichard Tran Mills MATMPIDENSE - MATMPIDENSE = "mpidense" - A matrix type to be used for distributed dense matrices. 1625002bc6daSRichard Tran Mills 16262ef1f0ffSBarry Smith Options Database Key: 162711a5261eSBarry Smith . -mat_type mpidense - sets the matrix type to `MATMPIDENSE` during a call to `MatSetFromOptions()` 1628002bc6daSRichard Tran Mills 1629002bc6daSRichard Tran Mills Level: beginner 1630002bc6daSRichard Tran Mills 16311cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreateDense()`, `MATSEQDENSE`, `MATDENSE` 1632002bc6daSRichard Tran Mills M*/ 16334742e46bSJacob Faibussowitsch PetscErrorCode MatCreate_MPIDense(Mat mat) 1634d71ae5a4SJacob Faibussowitsch { 1635273d9f13SBarry Smith Mat_MPIDense *a; 1636273d9f13SBarry Smith 1637273d9f13SBarry Smith PetscFunctionBegin; 16384dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&a)); 1639b0a32e0cSBarry Smith mat->data = (void *)a; 1640aea10558SJacob Faibussowitsch mat->ops[0] = MatOps_Values; 1641273d9f13SBarry Smith 1642273d9f13SBarry Smith mat->insertmode = NOT_SET_VALUES; 1643273d9f13SBarry Smith 1644273d9f13SBarry Smith /* build cache for off array entries formed */ 1645273d9f13SBarry Smith a->donotstash = PETSC_FALSE; 16462205254eSKarl Rupp 16479566063dSJacob Faibussowitsch PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)mat), 1, &mat->stash)); 1648273d9f13SBarry Smith 1649273d9f13SBarry Smith /* stuff used for matrix vector multiply */ 1650f4259b30SLisandro Dalcin a->lvec = NULL; 1651f4259b30SLisandro Dalcin a->Mvctx = NULL; 1652273d9f13SBarry Smith a->roworiented = PETSC_TRUE; 1653273d9f13SBarry Smith 16549566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", MatDenseGetLDA_MPIDense)); 16559566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", MatDenseSetLDA_MPIDense)); 16569566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", MatDenseGetArray_MPIDense)); 16579566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", MatDenseRestoreArray_MPIDense)); 16589566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", MatDenseGetArrayRead_MPIDense)); 16599566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", MatDenseRestoreArrayRead_MPIDense)); 16609566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", MatDenseGetArrayWrite_MPIDense)); 16619566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", MatDenseRestoreArrayWrite_MPIDense)); 16629566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", MatDensePlaceArray_MPIDense)); 16639566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", MatDenseResetArray_MPIDense)); 16649566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", MatDenseReplaceArray_MPIDense)); 16659566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", MatDenseGetColumnVec_MPIDense)); 16669566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", MatDenseRestoreColumnVec_MPIDense)); 16679566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", MatDenseGetColumnVecRead_MPIDense)); 16689566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", MatDenseRestoreColumnVecRead_MPIDense)); 16699566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", MatDenseGetColumnVecWrite_MPIDense)); 16709566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", MatDenseRestoreColumnVecWrite_MPIDense)); 16719566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", MatDenseGetSubMatrix_MPIDense)); 16729566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", MatDenseRestoreSubMatrix_MPIDense)); 16739566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", MatConvert_MPIAIJ_MPIDense)); 16749566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", MatConvert_MPIDense_MPIAIJ)); 16758baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 16769566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", MatConvert_MPIDense_Elemental)); 16778baccfbdSHong Zhang #endif 1678d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 16799566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", MatConvert_Dense_ScaLAPACK)); 1680d24d4204SJose E. Roman #endif 1681637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 16829566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", MatConvert_MPIDense_MPIDenseCUDA)); 1683637a0070SStefano Zampini #endif 16849566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", MatMPIDenseSetPreallocation_MPIDense)); 16859566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 16869566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 16876718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 16889566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 16899566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 16906718818eSStefano Zampini #endif 169147d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 169247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensehip_C", MatConvert_MPIDense_MPIDenseHIP)); 169347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 169447d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijhipsparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 169547d993e7Ssuyashtn #endif 16969566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", MatDenseGetColumn_MPIDense)); 16979566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", MatDenseRestoreColumn_MPIDense)); 16989566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, MATMPIDENSE)); 16993ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1700273d9f13SBarry Smith } 1701273d9f13SBarry Smith 1702209238afSKris Buschelman /*MC 1703002d173eSKris Buschelman MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices. 1704209238afSKris Buschelman 170511a5261eSBarry Smith This matrix type is identical to `MATSEQDENSE` when constructed with a single process communicator, 170611a5261eSBarry Smith and `MATMPIDENSE` otherwise. 1707209238afSKris Buschelman 17082ef1f0ffSBarry Smith Options Database Key: 170911a5261eSBarry Smith . -mat_type dense - sets the matrix type to `MATDENSE` during a call to `MatSetFromOptions()` 1710209238afSKris Buschelman 1711209238afSKris Buschelman Level: beginner 1712209238afSKris Buschelman 17131cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATSEQDENSE`, `MATMPIDENSE`, `MATDENSECUDA`, `MATDENSEHIP` 17146947451fSStefano Zampini M*/ 17156947451fSStefano Zampini 1716273d9f13SBarry Smith /*@C 1717273d9f13SBarry Smith MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries 1718273d9f13SBarry Smith 17198f490ea3SStefano Zampini Collective 1720273d9f13SBarry Smith 1721273d9f13SBarry Smith Input Parameters: 1722fe59aa6dSJacob Faibussowitsch + B - the matrix 17232ef1f0ffSBarry Smith - data - optional location of matrix data. Set to `NULL` for PETSc 1724273d9f13SBarry Smith to control all matrix memory allocation. 1725273d9f13SBarry Smith 17262ef1f0ffSBarry Smith Level: intermediate 17272ef1f0ffSBarry Smith 1728273d9f13SBarry Smith Notes: 17292ef1f0ffSBarry Smith The dense format is fully compatible with standard Fortran 1730273d9f13SBarry Smith storage by columns. 1731273d9f13SBarry Smith 1732273d9f13SBarry Smith The data input variable is intended primarily for Fortran programmers 1733273d9f13SBarry Smith who wish to allocate their own matrix memory space. Most users should 17342ef1f0ffSBarry Smith set `data` to `NULL`. 1735273d9f13SBarry Smith 17361cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMPIDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 1737273d9f13SBarry Smith @*/ 1738d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMPIDenseSetPreallocation(Mat B, PetscScalar *data) 1739d71ae5a4SJacob Faibussowitsch { 1740273d9f13SBarry Smith PetscFunctionBegin; 1741d5ea218eSStefano Zampini PetscValidHeaderSpecific(B, MAT_CLASSID, 1); 1742cac4c232SBarry Smith PetscTryMethod(B, "MatMPIDenseSetPreallocation_C", (Mat, PetscScalar *), (B, data)); 17433ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1744273d9f13SBarry Smith } 1745273d9f13SBarry Smith 1746d3042a70SBarry Smith /*@ 174711a5261eSBarry Smith MatDensePlaceArray - Allows one to replace the array in a `MATDENSE` matrix with an 1748d3042a70SBarry Smith array provided by the user. This is useful to avoid copying an array 1749d3042a70SBarry Smith into a matrix 1750d3042a70SBarry Smith 1751d3042a70SBarry Smith Not Collective 1752d3042a70SBarry Smith 1753d3042a70SBarry Smith Input Parameters: 1754d3042a70SBarry Smith + mat - the matrix 1755d3042a70SBarry Smith - array - the array in column major order 1756d3042a70SBarry Smith 17572ef1f0ffSBarry Smith Level: developer 17582ef1f0ffSBarry Smith 175911a5261eSBarry Smith Note: 176011a5261eSBarry Smith You can return to the original array with a call to `MatDenseResetArray()`. The user is responsible for freeing this array; it will not be 1761d3042a70SBarry Smith freed when the matrix is destroyed. 1762d3042a70SBarry Smith 17631cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatDenseGetArray()`, `MatDenseResetArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()`, 176411a5261eSBarry Smith `MatDenseReplaceArray()` 1765d3042a70SBarry Smith @*/ 1766d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDensePlaceArray(Mat mat, const PetscScalar *array) 1767d71ae5a4SJacob Faibussowitsch { 1768d3042a70SBarry Smith PetscFunctionBegin; 1769d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1770cac4c232SBarry Smith PetscUseMethod(mat, "MatDensePlaceArray_C", (Mat, const PetscScalar *), (mat, array)); 17719566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 177247d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 1773637a0070SStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 1774637a0070SStefano Zampini #endif 17753ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1776d3042a70SBarry Smith } 1777d3042a70SBarry Smith 1778d3042a70SBarry Smith /*@ 177911a5261eSBarry Smith MatDenseResetArray - Resets the matrix array to that it previously had before the call to `MatDensePlaceArray()` 1780d3042a70SBarry Smith 1781d3042a70SBarry Smith Not Collective 1782d3042a70SBarry Smith 17832fe279fdSBarry Smith Input Parameter: 1784d3042a70SBarry Smith . mat - the matrix 1785d3042a70SBarry Smith 17862ef1f0ffSBarry Smith Level: developer 17872ef1f0ffSBarry Smith 178811a5261eSBarry Smith Note: 178911a5261eSBarry Smith You can only call this after a call to `MatDensePlaceArray()` 1790d3042a70SBarry Smith 17911cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatDenseGetArray()`, `MatDensePlaceArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()` 1792d3042a70SBarry Smith @*/ 1793d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseResetArray(Mat mat) 1794d71ae5a4SJacob Faibussowitsch { 1795d3042a70SBarry Smith PetscFunctionBegin; 1796d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1797cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseResetArray_C", (Mat), (mat)); 17989566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 17993ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1800d3042a70SBarry Smith } 1801d3042a70SBarry Smith 1802d5ea218eSStefano Zampini /*@ 1803d5ea218eSStefano Zampini MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an 1804d5ea218eSStefano Zampini array provided by the user. This is useful to avoid copying an array 1805d5ea218eSStefano Zampini into a matrix 1806d5ea218eSStefano Zampini 1807d5ea218eSStefano Zampini Not Collective 1808d5ea218eSStefano Zampini 1809d5ea218eSStefano Zampini Input Parameters: 1810d5ea218eSStefano Zampini + mat - the matrix 1811d5ea218eSStefano Zampini - array - the array in column major order 1812d5ea218eSStefano Zampini 18132ef1f0ffSBarry Smith Level: developer 18142ef1f0ffSBarry Smith 181511a5261eSBarry Smith Note: 181611a5261eSBarry Smith The memory passed in MUST be obtained with `PetscMalloc()` and CANNOT be 1817d5ea218eSStefano Zampini freed by the user. It will be freed when the matrix is destroyed. 1818d5ea218eSStefano Zampini 18191cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatDensePlaceArray()`, `MatDenseGetArray()`, `VecReplaceArray()` 1820d5ea218eSStefano Zampini @*/ 1821d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseReplaceArray(Mat mat, const PetscScalar *array) 1822d71ae5a4SJacob Faibussowitsch { 1823d5ea218eSStefano Zampini PetscFunctionBegin; 1824d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1825cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseReplaceArray_C", (Mat, const PetscScalar *), (mat, array)); 18269566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 182747d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 1828d5ea218eSStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 1829d5ea218eSStefano Zampini #endif 18303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1831d5ea218eSStefano Zampini } 1832d5ea218eSStefano Zampini 1833637a0070SStefano Zampini /*@C 183411a5261eSBarry Smith MatCreateDense - Creates a matrix in `MATDENSE` format. 18358965ea79SLois Curfman McInnes 1836d083f849SBarry Smith Collective 1837db81eaa0SLois Curfman McInnes 18388965ea79SLois Curfman McInnes Input Parameters: 1839db81eaa0SLois Curfman McInnes + comm - MPI communicator 18402ef1f0ffSBarry Smith . m - number of local rows (or `PETSC_DECIDE` to have calculated if `M` is given) 18412ef1f0ffSBarry Smith . n - number of local columns (or `PETSC_DECIDE` to have calculated if `N` is given) 18422ef1f0ffSBarry Smith . M - number of global rows (or `PETSC_DECIDE` to have calculated if `m` is given) 18432ef1f0ffSBarry Smith . N - number of global columns (or `PETSC_DECIDE` to have calculated if `n` is given) 18442ef1f0ffSBarry Smith - data - optional location of matrix data. Set data to `NULL` (`PETSC_NULL_SCALAR` for Fortran users) for PETSc 1845dfc5480cSLois Curfman McInnes to control all matrix memory allocation. 18468965ea79SLois Curfman McInnes 18478965ea79SLois Curfman McInnes Output Parameter: 1848477f1c0bSLois Curfman McInnes . A - the matrix 18498965ea79SLois Curfman McInnes 18502ef1f0ffSBarry Smith Level: intermediate 18512ef1f0ffSBarry Smith 1852b259b22eSLois Curfman McInnes Notes: 18532ef1f0ffSBarry Smith The dense format is fully compatible with standard Fortran 185439ddd567SLois Curfman McInnes storage by columns. 185511a5261eSBarry Smith 185611a5261eSBarry Smith Although local portions of the matrix are stored in column-major 1857002bc6daSRichard Tran Mills order, the matrix is partitioned across MPI ranks by row. 18588965ea79SLois Curfman McInnes 185918f449edSLois Curfman McInnes The data input variable is intended primarily for Fortran programmers 186018f449edSLois Curfman McInnes who wish to allocate their own matrix memory space. Most users should 18612ef1f0ffSBarry Smith set `data` to `NULL` (`PETSC_NULL_SCALAR` for Fortran users). 186218f449edSLois Curfman McInnes 18638965ea79SLois Curfman McInnes The user MUST specify either the local or global matrix dimensions 18648965ea79SLois Curfman McInnes (possibly both). 18658965ea79SLois Curfman McInnes 18661cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 18678965ea79SLois Curfman McInnes @*/ 1868d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateDense(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, PetscScalar *data, Mat *A) 1869d71ae5a4SJacob Faibussowitsch { 18703a40ed3dSBarry Smith PetscFunctionBegin; 18719566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, A)); 18729566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*A, m, n, M, N)); 18736f08ad05SPierre Jolivet PetscCall(MatSetType(*A, MATDENSE)); 18749566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(*A, data)); 18756f08ad05SPierre Jolivet PetscCall(MatMPIDenseSetPreallocation(*A, data)); 18763ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 18778965ea79SLois Curfman McInnes } 18788965ea79SLois Curfman McInnes 1879d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDuplicate_MPIDense(Mat A, MatDuplicateOption cpvalues, Mat *newmat) 1880d71ae5a4SJacob Faibussowitsch { 18818965ea79SLois Curfman McInnes Mat mat; 18823501a2bdSLois Curfman McInnes Mat_MPIDense *a, *oldmat = (Mat_MPIDense *)A->data; 18838965ea79SLois Curfman McInnes 18843a40ed3dSBarry Smith PetscFunctionBegin; 1885f4259b30SLisandro Dalcin *newmat = NULL; 18869566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat)); 18879566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 18889566063dSJacob Faibussowitsch PetscCall(MatSetType(mat, ((PetscObject)A)->type_name)); 1889834f8fabSBarry Smith a = (Mat_MPIDense *)mat->data; 18905aa7edbeSHong Zhang 1891d5f3da31SBarry Smith mat->factortype = A->factortype; 1892c456f294SBarry Smith mat->assembled = PETSC_TRUE; 1893273d9f13SBarry Smith mat->preallocated = PETSC_TRUE; 18948965ea79SLois Curfman McInnes 1895e0fa3b82SLois Curfman McInnes mat->insertmode = NOT_SET_VALUES; 18963782ba37SSatish Balay a->donotstash = oldmat->donotstash; 1897e04c1aa4SHong Zhang 18989566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->rmap, &mat->rmap)); 18999566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->cmap, &mat->cmap)); 19008965ea79SLois Curfman McInnes 19019566063dSJacob Faibussowitsch PetscCall(MatDuplicate(oldmat->A, cpvalues, &a->A)); 190201b82886SBarry Smith 19038965ea79SLois Curfman McInnes *newmat = mat; 19043ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19058965ea79SLois Curfman McInnes } 19068965ea79SLois Curfman McInnes 190766976f2fSJacob Faibussowitsch static PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer) 1908d71ae5a4SJacob Faibussowitsch { 190987d5ce66SSatish Balay PetscBool isbinary; 191087d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 191187d5ce66SSatish Balay PetscBool ishdf5; 191287d5ce66SSatish Balay #endif 1913eb91f321SVaclav Hapla 1914eb91f321SVaclav Hapla PetscFunctionBegin; 1915eb91f321SVaclav Hapla PetscValidHeaderSpecific(newMat, MAT_CLASSID, 1); 1916eb91f321SVaclav Hapla PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2); 1917eb91f321SVaclav Hapla /* force binary viewer to load .info file if it has not yet done so */ 19189566063dSJacob Faibussowitsch PetscCall(PetscViewerSetUp(viewer)); 19199566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 192087d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 19219566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERHDF5, &ishdf5)); 192287d5ce66SSatish Balay #endif 1923eb91f321SVaclav Hapla if (isbinary) { 19249566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_Binary(newMat, viewer)); 1925eb91f321SVaclav Hapla #if defined(PETSC_HAVE_HDF5) 192687d5ce66SSatish Balay } else if (ishdf5) { 19279566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_HDF5(newMat, viewer)); 1928eb91f321SVaclav Hapla #endif 192998921bdaSJacob Faibussowitsch } else SETERRQ(PetscObjectComm((PetscObject)newMat), PETSC_ERR_SUP, "Viewer type %s not yet supported for reading %s matrices", ((PetscObject)viewer)->type_name, ((PetscObject)newMat)->type_name); 19303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1931eb91f321SVaclav Hapla } 1932eb91f321SVaclav Hapla 1933d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatEqual_MPIDense(Mat A, Mat B, PetscBool *flag) 1934d71ae5a4SJacob Faibussowitsch { 19356e4ee0c6SHong Zhang Mat_MPIDense *matB = (Mat_MPIDense *)B->data, *matA = (Mat_MPIDense *)A->data; 19366e4ee0c6SHong Zhang Mat a, b; 193790ace30eSBarry Smith 19386e4ee0c6SHong Zhang PetscFunctionBegin; 19396e4ee0c6SHong Zhang a = matA->A; 19406e4ee0c6SHong Zhang b = matB->A; 19412cf15c64SPierre Jolivet PetscCall(MatEqual(a, b, flag)); 19422cf15c64SPierre Jolivet PetscCall(MPIU_Allreduce(MPI_IN_PLACE, flag, 1, MPIU_BOOL, MPI_LAND, PetscObjectComm((PetscObject)A))); 19433ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19446e4ee0c6SHong Zhang } 194590ace30eSBarry Smith 194666976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data) 1947d71ae5a4SJacob Faibussowitsch { 19486718818eSStefano Zampini Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data; 1949baa3c1c6SHong Zhang 1950baa3c1c6SHong Zhang PetscFunctionBegin; 19519566063dSJacob Faibussowitsch PetscCall(PetscFree2(atb->sendbuf, atb->recvcounts)); 19529566063dSJacob Faibussowitsch PetscCall(MatDestroy(&atb->atb)); 19539566063dSJacob Faibussowitsch PetscCall(PetscFree(atb)); 19543ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1955baa3c1c6SHong Zhang } 1956baa3c1c6SHong Zhang 195766976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data) 1958d71ae5a4SJacob Faibussowitsch { 19596718818eSStefano Zampini Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data; 1960cc48ffa7SToby Isaac 1961cc48ffa7SToby Isaac PetscFunctionBegin; 19629566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->buf[0], abt->buf[1])); 19639566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->recvcounts, abt->recvdispls)); 19649566063dSJacob Faibussowitsch PetscCall(PetscFree(abt)); 19653ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1966cc48ffa7SToby Isaac } 1967cc48ffa7SToby Isaac 1968d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 1969d71ae5a4SJacob Faibussowitsch { 1970baa3c1c6SHong Zhang Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 19716718818eSStefano Zampini Mat_TransMatMultDense *atb; 1972cb20be35SHong Zhang MPI_Comm comm; 19736718818eSStefano Zampini PetscMPIInt size, *recvcounts; 19746718818eSStefano Zampini PetscScalar *carray, *sendbuf; 1975637a0070SStefano Zampini const PetscScalar *atbarray; 1976a1f9a5e6SStefano Zampini PetscInt i, cN = C->cmap->N, proc, k, j, lda; 1977e68c0b26SHong Zhang const PetscInt *ranges; 1978cb20be35SHong Zhang 1979cb20be35SHong Zhang PetscFunctionBegin; 19806718818eSStefano Zampini MatCheckProduct(C, 3); 19815f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 19826718818eSStefano Zampini atb = (Mat_TransMatMultDense *)C->product->data; 19836718818eSStefano Zampini recvcounts = atb->recvcounts; 19846718818eSStefano Zampini sendbuf = atb->sendbuf; 19856718818eSStefano Zampini 19869566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 19879566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 1988e68c0b26SHong Zhang 1989c5ef1628SHong Zhang /* compute atbarray = aseq^T * bseq */ 19909566063dSJacob Faibussowitsch PetscCall(MatTransposeMatMult(a->A, b->A, atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX, PETSC_DEFAULT, &atb->atb)); 1991cb20be35SHong Zhang 19929566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 1993cb20be35SHong Zhang 1994660d5466SHong Zhang /* arrange atbarray into sendbuf */ 19959566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(atb->atb, &atbarray)); 19969566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(atb->atb, &lda)); 1997637a0070SStefano Zampini for (proc = 0, k = 0; proc < size; proc++) { 1998baa3c1c6SHong Zhang for (j = 0; j < cN; j++) { 1999a1f9a5e6SStefano Zampini for (i = ranges[proc]; i < ranges[proc + 1]; i++) sendbuf[k++] = atbarray[i + j * lda]; 2000cb20be35SHong Zhang } 2001cb20be35SHong Zhang } 20029566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(atb->atb, &atbarray)); 2003637a0070SStefano Zampini 2004c5ef1628SHong Zhang /* sum all atbarray to local values of C */ 20059566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &carray)); 20069566063dSJacob Faibussowitsch PetscCallMPI(MPI_Reduce_scatter(sendbuf, carray, recvcounts, MPIU_SCALAR, MPIU_SUM, comm)); 20079566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &carray)); 200867af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 20099566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 20109566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 20113ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2012cb20be35SHong Zhang } 2013cb20be35SHong Zhang 2014d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2015d71ae5a4SJacob Faibussowitsch { 2016cb20be35SHong Zhang MPI_Comm comm; 2017baa3c1c6SHong Zhang PetscMPIInt size; 2018660d5466SHong Zhang PetscInt cm = A->cmap->n, cM, cN = B->cmap->N; 2019baa3c1c6SHong Zhang Mat_TransMatMultDense *atb; 202047d993e7Ssuyashtn PetscBool cisdense = PETSC_FALSE; 20210acaeb71SStefano Zampini PetscInt i; 20220acaeb71SStefano Zampini const PetscInt *ranges; 2023cb20be35SHong Zhang 2024cb20be35SHong Zhang PetscFunctionBegin; 20258f83a4d9SJacob Faibussowitsch MatCheckProduct(C, 4); 20265f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 20279566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 2028cb20be35SHong Zhang if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) { 202998921bdaSJacob Faibussowitsch SETERRQ(comm, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")", A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2030cb20be35SHong Zhang } 2031cb20be35SHong Zhang 20324222ddf1SHong Zhang /* create matrix product C */ 20339566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, cm, B->cmap->n, A->cmap->N, B->cmap->N)); 203447d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) 20359566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSECUDA, "")); 203647d993e7Ssuyashtn #endif 203747d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 203847d993e7Ssuyashtn PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSEHIP, "")); 203947d993e7Ssuyashtn #endif 204048a46eb9SPierre Jolivet if (!cisdense) PetscCall(MatSetType(C, ((PetscObject)A)->type_name)); 20419566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2042baa3c1c6SHong Zhang 20434222ddf1SHong Zhang /* create data structure for reuse C */ 20449566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 20459566063dSJacob Faibussowitsch PetscCall(PetscNew(&atb)); 20464222ddf1SHong Zhang cM = C->rmap->N; 20479566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(cM * cN, &atb->sendbuf, size, &atb->recvcounts)); 20489566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 20490acaeb71SStefano Zampini for (i = 0; i < size; i++) atb->recvcounts[i] = (ranges[i + 1] - ranges[i]) * cN; 2050baa3c1c6SHong Zhang 20516718818eSStefano Zampini C->product->data = atb; 20526718818eSStefano Zampini C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense; 20533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2054cb20be35SHong Zhang } 2055cb20be35SHong Zhang 2056d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2057d71ae5a4SJacob Faibussowitsch { 2058cc48ffa7SToby Isaac MPI_Comm comm; 2059cc48ffa7SToby Isaac PetscMPIInt i, size; 2060cc48ffa7SToby Isaac PetscInt maxRows, bufsiz; 2061cc48ffa7SToby Isaac PetscMPIInt tag; 20624222ddf1SHong Zhang PetscInt alg; 2063cc48ffa7SToby Isaac Mat_MatTransMultDense *abt; 20644222ddf1SHong Zhang Mat_Product *product = C->product; 20654222ddf1SHong Zhang PetscBool flg; 2066cc48ffa7SToby Isaac 2067cc48ffa7SToby Isaac PetscFunctionBegin; 20686718818eSStefano Zampini MatCheckProduct(C, 4); 20695f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 20704222ddf1SHong Zhang /* check local size of A and B */ 20715f80ce2aSJacob Faibussowitsch PetscCheck(A->cmap->n == B->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local column dimensions are incompatible, A (%" PetscInt_FMT ") != B (%" PetscInt_FMT ")", A->cmap->n, B->cmap->n); 2072cc48ffa7SToby Isaac 20739566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "allgatherv", &flg)); 2074637a0070SStefano Zampini alg = flg ? 0 : 1; 2075cc48ffa7SToby Isaac 20764222ddf1SHong Zhang /* setup matrix product C */ 20779566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, A->rmap->n, B->rmap->n, A->rmap->N, B->rmap->N)); 20789566063dSJacob Faibussowitsch PetscCall(MatSetType(C, MATMPIDENSE)); 20799566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 20809566063dSJacob Faibussowitsch PetscCall(PetscObjectGetNewTag((PetscObject)C, &tag)); 20814222ddf1SHong Zhang 20824222ddf1SHong Zhang /* create data structure for reuse C */ 20839566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 20849566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 20859566063dSJacob Faibussowitsch PetscCall(PetscNew(&abt)); 2086cc48ffa7SToby Isaac abt->tag = tag; 2087faa55883SToby Isaac abt->alg = alg; 2088faa55883SToby Isaac switch (alg) { 20894222ddf1SHong Zhang case 1: /* alg: "cyclic" */ 2090cc48ffa7SToby Isaac for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, (B->rmap->range[i + 1] - B->rmap->range[i])); 2091cc48ffa7SToby Isaac bufsiz = A->cmap->N * maxRows; 2092*f4f49eeaSPierre Jolivet PetscCall(PetscMalloc2(bufsiz, &abt->buf[0], bufsiz, &abt->buf[1])); 2093faa55883SToby Isaac break; 20944222ddf1SHong Zhang default: /* alg: "allgatherv" */ 2095*f4f49eeaSPierre Jolivet PetscCall(PetscMalloc2(B->rmap->n * B->cmap->N, &abt->buf[0], B->rmap->N * B->cmap->N, &abt->buf[1])); 2096*f4f49eeaSPierre Jolivet PetscCall(PetscMalloc2(size, &abt->recvcounts, size + 1, &abt->recvdispls)); 2097faa55883SToby Isaac for (i = 0; i <= size; i++) abt->recvdispls[i] = B->rmap->range[i] * A->cmap->N; 2098faa55883SToby Isaac for (i = 0; i < size; i++) abt->recvcounts[i] = abt->recvdispls[i + 1] - abt->recvdispls[i]; 2099faa55883SToby Isaac break; 2100faa55883SToby Isaac } 2101cc48ffa7SToby Isaac 21026718818eSStefano Zampini C->product->data = abt; 21036718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatTransMult_MPIDense_MPIDense; 21044222ddf1SHong Zhang C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense; 21053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2106cc48ffa7SToby Isaac } 2107cc48ffa7SToby Isaac 2108d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C) 2109d71ae5a4SJacob Faibussowitsch { 2110cc48ffa7SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 21116718818eSStefano Zampini Mat_MatTransMultDense *abt; 2112cc48ffa7SToby Isaac MPI_Comm comm; 2113cc48ffa7SToby Isaac PetscMPIInt rank, size, sendsiz, recvsiz, sendto, recvfrom, recvisfrom; 2114f4259b30SLisandro Dalcin PetscScalar *sendbuf, *recvbuf = NULL, *cv; 2115cc48ffa7SToby Isaac PetscInt i, cK = A->cmap->N, k, j, bn; 2116cc48ffa7SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2117637a0070SStefano Zampini const PetscScalar *av, *bv; 211823fff9afSBarry Smith PetscBLASInt cm, cn, ck, alda, blda = 0, clda; 2119cc48ffa7SToby Isaac MPI_Request reqs[2]; 2120cc48ffa7SToby Isaac const PetscInt *ranges; 2121cc48ffa7SToby Isaac 2122cc48ffa7SToby Isaac PetscFunctionBegin; 21236718818eSStefano Zampini MatCheckProduct(C, 3); 21245f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 21256718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 21269566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 21279566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank)); 21289566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 21299566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 21309566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 21319566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 21329566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 21339566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 21349566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &i)); 21359566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &blda)); 21369566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 21379566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 21389566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(B, &ranges)); 2139cc48ffa7SToby Isaac bn = B->rmap->n; 2140637a0070SStefano Zampini if (blda == bn) { 2141637a0070SStefano Zampini sendbuf = (PetscScalar *)bv; 2142cc48ffa7SToby Isaac } else { 2143cc48ffa7SToby Isaac sendbuf = abt->buf[0]; 2144cc48ffa7SToby Isaac for (k = 0, i = 0; i < cK; i++) { 2145ad540459SPierre Jolivet for (j = 0; j < bn; j++, k++) sendbuf[k] = bv[i * blda + j]; 2146cc48ffa7SToby Isaac } 2147cc48ffa7SToby Isaac } 2148cc48ffa7SToby Isaac if (size > 1) { 2149cc48ffa7SToby Isaac sendto = (rank + size - 1) % size; 2150cc48ffa7SToby Isaac recvfrom = (rank + size + 1) % size; 2151cc48ffa7SToby Isaac } else { 2152cc48ffa7SToby Isaac sendto = recvfrom = 0; 2153cc48ffa7SToby Isaac } 21549566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 21559566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 2156cc48ffa7SToby Isaac recvisfrom = rank; 2157cc48ffa7SToby Isaac for (i = 0; i < size; i++) { 2158cc48ffa7SToby Isaac /* we have finished receiving in sending, bufs can be read/modified */ 2159cc48ffa7SToby Isaac PetscInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */ 2160cc48ffa7SToby Isaac PetscInt nextbn = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom]; 2161cc48ffa7SToby Isaac 2162cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2163cc48ffa7SToby Isaac /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */ 2164cc48ffa7SToby Isaac sendsiz = cK * bn; 2165cc48ffa7SToby Isaac recvsiz = cK * nextbn; 2166cc48ffa7SToby Isaac recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1]; 21679566063dSJacob Faibussowitsch PetscCallMPI(MPI_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0])); 21689566063dSJacob Faibussowitsch PetscCallMPI(MPI_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1])); 2169cc48ffa7SToby Isaac } 2170cc48ffa7SToby Isaac 2171cc48ffa7SToby Isaac /* local aseq * sendbuf^T */ 21729566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn)); 2173792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "T", &cm, &cn, &ck, &_DOne, av, &alda, sendbuf, &cn, &_DZero, cv + clda * ranges[recvisfrom], &clda)); 2174cc48ffa7SToby Isaac 2175cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2176cc48ffa7SToby Isaac /* wait for the sends and receives to complete, swap sendbuf and recvbuf */ 21779566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE)); 2178cc48ffa7SToby Isaac } 2179cc48ffa7SToby Isaac bn = nextbn; 2180cc48ffa7SToby Isaac recvisfrom = nextrecvisfrom; 2181cc48ffa7SToby Isaac sendbuf = recvbuf; 2182cc48ffa7SToby Isaac } 21839566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 21849566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 21859566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 218667af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 21879566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 21889566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 21893ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2190cc48ffa7SToby Isaac } 2191cc48ffa7SToby Isaac 2192d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C) 2193d71ae5a4SJacob Faibussowitsch { 2194faa55883SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 21956718818eSStefano Zampini Mat_MatTransMultDense *abt; 2196faa55883SToby Isaac MPI_Comm comm; 2197637a0070SStefano Zampini PetscMPIInt size; 2198637a0070SStefano Zampini PetscScalar *cv, *sendbuf, *recvbuf; 2199637a0070SStefano Zampini const PetscScalar *av, *bv; 2200637a0070SStefano Zampini PetscInt blda, i, cK = A->cmap->N, k, j, bn; 2201faa55883SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2202637a0070SStefano Zampini PetscBLASInt cm, cn, ck, alda, clda; 2203faa55883SToby Isaac 2204faa55883SToby Isaac PetscFunctionBegin; 22056718818eSStefano Zampini MatCheckProduct(C, 3); 22065f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 22076718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 22089566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 22099566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 22109566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 22119566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 22129566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 22139566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 22149566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 22159566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &blda)); 22169566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 22179566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 2218faa55883SToby Isaac /* copy transpose of B into buf[0] */ 2219faa55883SToby Isaac bn = B->rmap->n; 2220faa55883SToby Isaac sendbuf = abt->buf[0]; 2221faa55883SToby Isaac recvbuf = abt->buf[1]; 2222faa55883SToby Isaac for (k = 0, j = 0; j < bn; j++) { 2223ad540459SPierre Jolivet for (i = 0; i < cK; i++, k++) sendbuf[k] = bv[i * blda + j]; 2224faa55883SToby Isaac } 22259566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 22269566063dSJacob Faibussowitsch PetscCallMPI(MPI_Allgatherv(sendbuf, bn * cK, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm)); 22279566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 22289566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 22299566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->cmap->n, &cn)); 2230792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "N", &cm, &cn, &ck, &_DOne, av, &alda, recvbuf, &ck, &_DZero, cv, &clda)); 22319566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 22329566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 22339566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 223467af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 22359566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 22369566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 22373ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2238faa55883SToby Isaac } 2239faa55883SToby Isaac 2240d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2241d71ae5a4SJacob Faibussowitsch { 22426718818eSStefano Zampini Mat_MatTransMultDense *abt; 2243faa55883SToby Isaac 2244faa55883SToby Isaac PetscFunctionBegin; 22456718818eSStefano Zampini MatCheckProduct(C, 3); 22465f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 22476718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 2248faa55883SToby Isaac switch (abt->alg) { 2249d71ae5a4SJacob Faibussowitsch case 1: 2250d71ae5a4SJacob Faibussowitsch PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C)); 2251d71ae5a4SJacob Faibussowitsch break; 2252d71ae5a4SJacob Faibussowitsch default: 2253d71ae5a4SJacob Faibussowitsch PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C)); 2254d71ae5a4SJacob Faibussowitsch break; 2255faa55883SToby Isaac } 22563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2257faa55883SToby Isaac } 2258faa55883SToby Isaac 225966976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data) 2260d71ae5a4SJacob Faibussowitsch { 22616718818eSStefano Zampini Mat_MatMultDense *ab = (Mat_MatMultDense *)data; 2262320f2790SHong Zhang 2263320f2790SHong Zhang PetscFunctionBegin; 22649566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ce)); 22659566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ae)); 22669566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Be)); 22679566063dSJacob Faibussowitsch PetscCall(PetscFree(ab)); 22683ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2269320f2790SHong Zhang } 2270320f2790SHong Zhang 22715d8c7819SPierre Jolivet static PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2272d71ae5a4SJacob Faibussowitsch { 22736718818eSStefano Zampini Mat_MatMultDense *ab; 22745d8c7819SPierre Jolivet Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 2275320f2790SHong Zhang 2276320f2790SHong Zhang PetscFunctionBegin; 22776718818eSStefano Zampini MatCheckProduct(C, 3); 22785f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Missing product data"); 22796718818eSStefano Zampini ab = (Mat_MatMultDense *)C->product->data; 22805d8c7819SPierre Jolivet if (ab->Ae && ab->Ce) { 22815d8c7819SPierre Jolivet #if PetscDefined(HAVE_ELEMENTAL) 22829566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(A, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Ae)); 22839566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(B, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Be)); 22849566063dSJacob Faibussowitsch PetscCall(MatMatMultNumeric_Elemental(ab->Ae, ab->Be, ab->Ce)); 22859566063dSJacob Faibussowitsch PetscCall(MatConvert(ab->Ce, MATMPIDENSE, MAT_REUSE_MATRIX, &C)); 22865d8c7819SPierre Jolivet #else 22875d8c7819SPierre Jolivet SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "PETSC_HAVE_ELEMENTAL not defined"); 22885d8c7819SPierre Jolivet #endif 22895d8c7819SPierre Jolivet } else { 22905d8c7819SPierre Jolivet const PetscScalar *read; 22915d8c7819SPierre Jolivet PetscScalar *write; 22925d8c7819SPierre Jolivet PetscInt lda; 22935d8c7819SPierre Jolivet 22945d8c7819SPierre Jolivet PetscCall(MatDenseGetLDA(B, &lda)); 22955d8c7819SPierre Jolivet PetscCall(MatDenseGetArrayRead(B, &read)); 22965d8c7819SPierre Jolivet PetscCall(MatDenseGetArrayWrite(ab->Be, &write)); 22975d8c7819SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); /* cannot be done during the symbolic phase because of possible calls to MatProductReplaceMats() */ 22985d8c7819SPierre Jolivet for (PetscInt i = 0; i < C->cmap->N; ++i) { 22995d8c7819SPierre Jolivet PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, read + i * lda, write + i * ab->Be->rmap->n, MPI_REPLACE)); 23005d8c7819SPierre Jolivet PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, read + i * lda, write + i * ab->Be->rmap->n, MPI_REPLACE)); 23015d8c7819SPierre Jolivet } 23025d8c7819SPierre Jolivet PetscCall(MatDenseRestoreArrayWrite(ab->Be, &write)); 23035d8c7819SPierre Jolivet PetscCall(MatDenseRestoreArrayRead(B, &read)); 2304*f4f49eeaSPierre Jolivet PetscCall(MatMatMultNumeric_SeqDense_SeqDense(((Mat_MPIDense *)A->data)->A, ab->Be, ((Mat_MPIDense *)C->data)->A)); 23055d8c7819SPierre Jolivet } 23063ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2307320f2790SHong Zhang } 2308320f2790SHong Zhang 2309d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2310d71ae5a4SJacob Faibussowitsch { 23115d8c7819SPierre Jolivet Mat_Product *product = C->product; 23125d8c7819SPierre Jolivet PetscInt alg; 2313320f2790SHong Zhang Mat_MatMultDense *ab; 23145d8c7819SPierre Jolivet PetscBool flg; 2315320f2790SHong Zhang 2316320f2790SHong Zhang PetscFunctionBegin; 23176718818eSStefano Zampini MatCheckProduct(C, 4); 23185f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 23194222ddf1SHong Zhang /* check local size of A and B */ 23205d8c7819SPierre Jolivet PetscCheck(A->cmap->rstart == B->rmap->rstart && A->cmap->rend == B->rmap->rend, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ", %" PetscInt_FMT ")", 23215d8c7819SPierre Jolivet A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2322320f2790SHong Zhang 23235d8c7819SPierre Jolivet PetscCall(PetscStrcmp(product->alg, "petsc", &flg)); 23245d8c7819SPierre Jolivet alg = flg ? 0 : 1; 23254222ddf1SHong Zhang 23264222ddf1SHong Zhang /* setup C */ 23275d8c7819SPierre Jolivet PetscCall(MatSetSizes(C, A->rmap->n, B->cmap->n, A->rmap->N, B->cmap->N)); 23285d8c7819SPierre Jolivet PetscCall(MatSetType(C, MATMPIDENSE)); 23299566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2330320f2790SHong Zhang 2331320f2790SHong Zhang /* create data structure for reuse Cdense */ 23329566063dSJacob Faibussowitsch PetscCall(PetscNew(&ab)); 23335d8c7819SPierre Jolivet 23345d8c7819SPierre Jolivet switch (alg) { 23355d8c7819SPierre Jolivet case 1: /* alg: "elemental" */ 23365d8c7819SPierre Jolivet #if PetscDefined(HAVE_ELEMENTAL) 23375d8c7819SPierre Jolivet /* create elemental matrices Ae and Be */ 23385d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &ab->Ae)); 23395d8c7819SPierre Jolivet PetscCall(MatSetSizes(ab->Ae, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 23405d8c7819SPierre Jolivet PetscCall(MatSetType(ab->Ae, MATELEMENTAL)); 23415d8c7819SPierre Jolivet PetscCall(MatSetUp(ab->Ae)); 23425d8c7819SPierre Jolivet PetscCall(MatSetOption(ab->Ae, MAT_ROW_ORIENTED, PETSC_FALSE)); 23435d8c7819SPierre Jolivet 23445d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)B), &ab->Be)); 23455d8c7819SPierre Jolivet PetscCall(MatSetSizes(ab->Be, PETSC_DECIDE, PETSC_DECIDE, B->rmap->N, B->cmap->N)); 23465d8c7819SPierre Jolivet PetscCall(MatSetType(ab->Be, MATELEMENTAL)); 23475d8c7819SPierre Jolivet PetscCall(MatSetUp(ab->Be)); 23485d8c7819SPierre Jolivet PetscCall(MatSetOption(ab->Be, MAT_ROW_ORIENTED, PETSC_FALSE)); 23495d8c7819SPierre Jolivet 23505d8c7819SPierre Jolivet /* compute symbolic Ce = Ae*Be */ 23515d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)C), &ab->Ce)); 23525d8c7819SPierre Jolivet PetscCall(MatMatMultSymbolic_Elemental(ab->Ae, ab->Be, fill, ab->Ce)); 23535d8c7819SPierre Jolivet #else 23545d8c7819SPierre Jolivet SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "PETSC_HAVE_ELEMENTAL not defined"); 23555d8c7819SPierre Jolivet #endif 23565d8c7819SPierre Jolivet break; 23575d8c7819SPierre Jolivet default: /* alg: "petsc" */ 23585d8c7819SPierre Jolivet ab->Ae = NULL; 23595d8c7819SPierre Jolivet PetscCall(MatCreateSeqDense(PETSC_COMM_SELF, A->cmap->N, B->cmap->N, NULL, &ab->Be)); 23605d8c7819SPierre Jolivet ab->Ce = NULL; 23615d8c7819SPierre Jolivet break; 23625d8c7819SPierre Jolivet } 23636718818eSStefano Zampini 23646718818eSStefano Zampini C->product->data = ab; 23656718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense; 23664222ddf1SHong Zhang C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense; 23673ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2368320f2790SHong Zhang } 23692ef1f0ffSBarry Smith 2370d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C) 2371d71ae5a4SJacob Faibussowitsch { 23725d8c7819SPierre Jolivet Mat_Product *product = C->product; 23735d8c7819SPierre Jolivet const char *algTypes[2] = {"petsc", "elemental"}; 23745d8c7819SPierre Jolivet PetscInt alg, nalg = PetscDefined(HAVE_ELEMENTAL) ? 2 : 1; 23755d8c7819SPierre Jolivet PetscBool flg = PETSC_FALSE; 23765d8c7819SPierre Jolivet 23774d86920dSPierre Jolivet PetscFunctionBegin; 23785d8c7819SPierre Jolivet /* Set default algorithm */ 23795d8c7819SPierre Jolivet alg = 0; /* default is petsc */ 23805d8c7819SPierre Jolivet PetscCall(PetscStrcmp(product->alg, "default", &flg)); 23815d8c7819SPierre Jolivet if (flg) PetscCall(MatProductSetAlgorithm(C, (MatProductAlgorithm)algTypes[alg])); 23825d8c7819SPierre Jolivet 23835d8c7819SPierre Jolivet /* Get runtime option */ 23845d8c7819SPierre Jolivet PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_AB", "Mat"); 23855d8c7819SPierre Jolivet PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_AB", algTypes, nalg, algTypes[alg], &alg, &flg)); 23865d8c7819SPierre Jolivet PetscOptionsEnd(); 23875d8c7819SPierre Jolivet if (flg) PetscCall(MatProductSetAlgorithm(C, (MatProductAlgorithm)algTypes[alg])); 23885d8c7819SPierre Jolivet 23894222ddf1SHong Zhang C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense; 23904222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_AB; 23913ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2392320f2790SHong Zhang } 239386aefd0dSHong Zhang 2394d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C) 2395d71ae5a4SJacob Faibussowitsch { 23964222ddf1SHong Zhang Mat_Product *product = C->product; 23974222ddf1SHong Zhang Mat A = product->A, B = product->B; 23984222ddf1SHong Zhang 23994222ddf1SHong Zhang PetscFunctionBegin; 240007e90273SPierre Jolivet PetscCheck(A->rmap->rstart == B->rmap->rstart && A->rmap->rend == B->rmap->rend, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, (%" PetscInt_FMT ", %" PetscInt_FMT ") != (%" PetscInt_FMT ",%" PetscInt_FMT ")", 240107e90273SPierre Jolivet A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 24026718818eSStefano Zampini C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense; 24036718818eSStefano Zampini C->ops->productsymbolic = MatProductSymbolic_AtB; 24043ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 24054222ddf1SHong Zhang } 24064222ddf1SHong Zhang 2407d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C) 2408d71ae5a4SJacob Faibussowitsch { 24094222ddf1SHong Zhang Mat_Product *product = C->product; 24104222ddf1SHong Zhang const char *algTypes[2] = {"allgatherv", "cyclic"}; 24114222ddf1SHong Zhang PetscInt alg, nalg = 2; 24124222ddf1SHong Zhang PetscBool flg = PETSC_FALSE; 24134222ddf1SHong Zhang 24144222ddf1SHong Zhang PetscFunctionBegin; 24154222ddf1SHong Zhang /* Set default algorithm */ 24164222ddf1SHong Zhang alg = 0; /* default is allgatherv */ 24179566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "default", &flg)); 241848a46eb9SPierre Jolivet if (flg) PetscCall(MatProductSetAlgorithm(C, (MatProductAlgorithm)algTypes[alg])); 24194222ddf1SHong Zhang 24204222ddf1SHong Zhang /* Get runtime option */ 24214222ddf1SHong Zhang if (product->api_user) { 2422d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatMatTransposeMult", "Mat"); 24239566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-matmattransmult_mpidense_mpidense_via", "Algorithmic approach", "MatMatTransposeMult", algTypes, nalg, algTypes[alg], &alg, &flg)); 2424d0609cedSBarry Smith PetscOptionsEnd(); 24254222ddf1SHong Zhang } else { 2426d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_ABt", "Mat"); 24279566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_ABt", algTypes, nalg, algTypes[alg], &alg, &flg)); 2428d0609cedSBarry Smith PetscOptionsEnd(); 24294222ddf1SHong Zhang } 243048a46eb9SPierre Jolivet if (flg) PetscCall(MatProductSetAlgorithm(C, (MatProductAlgorithm)algTypes[alg])); 24314222ddf1SHong Zhang 24324222ddf1SHong Zhang C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense; 24334222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_ABt; 24343ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 24354222ddf1SHong Zhang } 24364222ddf1SHong Zhang 24375d8c7819SPierre Jolivet static PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C) 2438d71ae5a4SJacob Faibussowitsch { 24394222ddf1SHong Zhang Mat_Product *product = C->product; 24404222ddf1SHong Zhang 24414222ddf1SHong Zhang PetscFunctionBegin; 24424222ddf1SHong Zhang switch (product->type) { 2443d71ae5a4SJacob Faibussowitsch case MATPRODUCT_AB: 2444d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_AB(C)); 2445d71ae5a4SJacob Faibussowitsch break; 2446d71ae5a4SJacob Faibussowitsch case MATPRODUCT_AtB: 2447d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_AtB(C)); 2448d71ae5a4SJacob Faibussowitsch break; 2449d71ae5a4SJacob Faibussowitsch case MATPRODUCT_ABt: 2450d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_ABt(C)); 2451d71ae5a4SJacob Faibussowitsch break; 2452d71ae5a4SJacob Faibussowitsch default: 2453d71ae5a4SJacob Faibussowitsch break; 24544222ddf1SHong Zhang } 24553ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 24564222ddf1SHong Zhang } 2457