1f6f390a9SLois Curfman McInnes 2f6f390a9SLois Curfman McInnes #if !defined(__DENSE_H) 3f6f390a9SLois Curfman McInnes #define __DENSE_H 4af0996ceSBarry Smith #include <petsc/private/matimpl.h> 5afea5027SHong Zhang #include <../src/mat/impls/aij/seq/aij.h> /* Mat_MatTransMatMult is defined here */ 6f6f390a9SLois Curfman McInnes 7f6f390a9SLois Curfman McInnes /* 8f6f390a9SLois Curfman McInnes MATSEQDENSE format - conventional dense Fortran storage (by columns) 9f6f390a9SLois Curfman McInnes */ 10f6f390a9SLois Curfman McInnes 11f6f390a9SLois Curfman McInnes typedef struct { 12ea709b57SSatish Balay PetscScalar *v; /* matrix elements */ 13d3042a70SBarry Smith PetscScalar *unplacedarray; /* if one called MatDensePlaceArray(), this is where it stashed the original */ 14ace3abfcSBarry Smith PetscBool roworiented; /* if true, row oriented input (default) */ 1513f74950SBarry Smith PetscInt pad; /* padding */ 164ce68768SBarry Smith PetscBLASInt *pivots; /* pivots in LU factorization */ 17a49dc2a2SStefano Zampini PetscBLASInt lfwork; /* length of work array in factorization */ 18a49dc2a2SStefano Zampini PetscScalar *fwork; /* work array in factorization */ 19284134d9SBarry Smith PetscBLASInt lda; /* Lapack leading dimension of data */ 20ace3abfcSBarry Smith PetscBool changelda; /* change lda on resize? Default unless user set lda */ 2121a2c019SBarry Smith PetscBLASInt Mmax,Nmax; /* indicates the largest dimensions of data possible */ 22ace3abfcSBarry Smith PetscBool user_alloc; /* true if the user provided the dense data */ 23d3042a70SBarry Smith PetscBool unplaced_user_alloc; 24abc3b08eSStefano Zampini Mat ptapwork; /* workspace (SeqDense matrix) for PtAP */ 25afea5027SHong Zhang 26afea5027SHong Zhang Mat_MatTransMatMult *atb; /* used by MatTransposeMatMult_SeqAIJ_SeqDense */ 27f6f390a9SLois Curfman McInnes } Mat_SeqDense; 28f6f390a9SLois Curfman McInnes 29*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatMatMultSymbolic_SeqDense_SeqDense(Mat,Mat,PetscReal,Mat*); 30*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatMatMultNumeric_SeqDense_SeqDense(Mat,Mat,Mat); 31*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatTransposeMatMult_SeqDense_SeqDense(Mat,Mat,MatReuse,PetscReal,Mat*); 32*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatTransposeMatMultSymbolic_SeqDense_SeqDense(Mat,Mat,PetscReal,Mat*); 33*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatTransposeMatMultNumeric_SeqDense_SeqDense(Mat,Mat,Mat); 34*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatMatTransposeMult_SeqDense_SeqDense(Mat,Mat,MatReuse,PetscReal,Mat*); 35*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatMatTransposeMultSymbolic_SeqDense_SeqDense(Mat,Mat,PetscReal,Mat*); 36*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatMatTransposeMultNumeric_SeqDense_SeqDense(Mat,Mat,Mat); 37*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatMatMultSymbolic_SeqAIJ_SeqDense(Mat,Mat,PetscReal,Mat*); 38*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatMatMultNumeric_SeqAIJ_SeqDense(Mat,Mat,Mat); 39*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatMatMultSymbolic_SeqBAIJ_SeqDense(Mat,Mat,PetscReal,Mat*); 40*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatMatMultNumeric_SeqBAIJ_SeqDense(Mat,Mat,Mat); 41*ca15aa20SStefano Zampini 42*ca15aa20SStefano Zampini PETSC_EXTERN PetscErrorCode MatCreate_SeqDense(Mat); 43*ca15aa20SStefano Zampini 44*ca15aa20SStefano Zampini /* Used by SeqDenseCUDA */ 45*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatDuplicateNoCreate_SeqDense(Mat,Mat,MatDuplicateOption); 46*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatNorm_SeqDense(Mat,NormType,PetscReal*); 47*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatView_SeqDense(Mat,PetscViewer); 48*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatDestroy_SeqDense(Mat); 49*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatDenseGetArray_SeqDense(Mat,PetscScalar*[]); 50*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatDenseRestoreArray_SeqDense(Mat,PetscScalar*[]); 51*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatAXPY_SeqDense(Mat,PetscScalar,Mat,MatStructure); 52*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatMultTransposeAdd_SeqDense(Mat,Vec,Vec,Vec); 53*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatMultTranspose_SeqDense(Mat,Vec,Vec); 54*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatMultAdd_SeqDense(Mat,Vec,Vec,Vec); 55*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatMult_SeqDense(Mat,Vec,Vec); 56*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatDuplicate_SeqDense(Mat,MatDuplicateOption,Mat*); 57*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatSeqDenseSetPreallocation_SeqDense(Mat,PetscScalar*); 58*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatCholeskyFactor_SeqDense(Mat,IS,const MatFactorInfo*); 59*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatLUFactor_SeqDense(Mat,IS,IS,const MatFactorInfo*); 60*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatCholeskyFactorSymbolic_SeqDense(Mat,Mat,IS,const MatFactorInfo*); 61*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatLUFactorSymbolic_SeqDense(Mat,Mat,IS,IS,const MatFactorInfo*); 62*ca15aa20SStefano Zampini PETSC_INTERN PetscErrorCode MatSeqDenseSymmetrize_Private(Mat,PetscBool); 6318476b09SLois Curfman McInnes 64afea5027SHong Zhang PETSC_INTERN PetscErrorCode MatDestroy_SeqDense_MatTransMatMult(Mat); 65afea5027SHong Zhang 66150d2497SBarry Smith PETSC_INTERN PetscErrorCode MatMatMult_SeqAIJ_SeqDense(Mat,Mat,MatReuse,PetscReal,Mat*); 67a001520aSPierre Jolivet PETSC_INTERN PetscErrorCode MatMatMult_SeqBAIJ_SeqDense(Mat,Mat,MatReuse,PetscReal,Mat*); 68150d2497SBarry Smith PETSC_INTERN PetscErrorCode MatMatMult_SeqDense_SeqDense(Mat,Mat,MatReuse,PetscReal,Mat*); 6905709791SSatish Balay PETSC_EXTERN PetscErrorCode MatSeqDenseInvertFactors_Private(Mat); 70ec01deb9SMatthew Knepley 71d528f656SJakub Kruzik PETSC_INTERN PetscErrorCode MatCreateMPIMatConcatenateSeqMat_SeqDense(MPI_Comm,Mat,PetscInt,MatReuse,Mat*); 72d528f656SJakub Kruzik PETSC_INTERN PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm,Mat,PetscInt,MatReuse,Mat*); 73d528f656SJakub Kruzik 74eb91f321SVaclav Hapla PETSC_INTERN PetscErrorCode MatLoad_Dense_HDF5(Mat,PetscViewer); 75f6f390a9SLois Curfman McInnes #endif 76