xref: /petsc/src/mat/impls/elemental/matelem.cxx (revision 5cb544a08f8a0bbfbc63a2f71c4e3dc3b2256b33)
1 #include <../src/mat/impls/elemental/matelemimpl.h> /*I "petscmat.h" I*/
2 
3 /*
4     The variable Petsc_Elemental_keyval is used to indicate an MPI attribute that
5   is attached to a communicator, in this case the attribute is a Mat_Elemental_Grid
6 */
7 static PetscMPIInt Petsc_Elemental_keyval = MPI_KEYVAL_INVALID;
8 
9 #undef __FUNCT__
10 #define __FUNCT__ "PetscElementalInitializePackage"
11 /*@C
12    PetscElementalInitializePackage - Initialize Elemental package
13 
14    Logically Collective
15 
16    Input Arguments:
17 .  path - the dynamic library path or PETSC_NULL
18 
19    Level: developer
20 
21 .seealso: MATELEMENTAL, PetscElementalFinalizePackage()
22 @*/
23 PetscErrorCode PetscElementalInitializePackage(const char *path)
24 {
25   PetscErrorCode ierr;
26 
27   PetscFunctionBegin;
28   if (elem::Initialized()) PetscFunctionReturn(0);
29   { /* We have already initialized MPI, so this song and dance is just to pass these variables (which won't be used by Elemental) through the interface that needs references */
30     int zero = 0;
31     char **nothing = 0;
32     elem::Initialize(zero,nothing);
33   }
34   ierr = PetscRegisterFinalize(PetscElementalFinalizePackage);CHKERRQ(ierr);
35   PetscFunctionReturn(0);
36 }
37 
38 #undef __FUNCT__
39 #define __FUNCT__ "PetscElementalFinalizePackage"
40 /*@C
41    PetscElementalFinalizePackage - Finalize Elemental package
42 
43    Logically Collective
44 
45    Level: developer
46 
47 .seealso: MATELEMENTAL, PetscElementalInitializePackage()
48 @*/
49 PetscErrorCode PetscElementalFinalizePackage(void)
50 {
51 
52   PetscFunctionBegin;
53   elem::Finalize();
54   PetscFunctionReturn(0);
55 }
56 
57 #undef __FUNCT__
58 #define __FUNCT__ "MatView_Elemental"
59 static PetscErrorCode MatView_Elemental(Mat A,PetscViewer viewer)
60 {
61   PetscErrorCode ierr;
62   Mat_Elemental  *a = (Mat_Elemental*)A->data;
63   PetscBool      iascii;
64 
65   PetscFunctionBegin;
66   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
67   if (iascii) {
68     PetscViewerFormat format;
69     ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr);
70     if (format == PETSC_VIEWER_ASCII_INFO) {
71       /* call elemental viewing function */
72       ierr = PetscViewerASCIIPrintf(viewer,"Elemental run parameters:\n");CHKERRQ(ierr);
73       ierr = PetscViewerASCIIPrintf(viewer,"  allocated entries=%d\n",(*a->emat).AllocatedMemory());CHKERRQ(ierr);
74       ierr = PetscViewerASCIIPrintf(viewer,"  grid height=%d, grid width=%d\n",(*a->emat).Grid().Height(),(*a->emat).Grid().Width());CHKERRQ(ierr);
75       if (format == PETSC_VIEWER_ASCII_FACTOR_INFO) {
76         /* call elemental viewing function */
77         ierr = PetscPrintf(((PetscObject)viewer)->comm,"test matview_elemental 2\n");CHKERRQ(ierr);
78       }
79 
80     } else if (format == PETSC_VIEWER_DEFAULT) {
81       ierr = PetscViewerASCIIUseTabs(viewer,PETSC_FALSE);CHKERRQ(ierr);
82       ierr = PetscObjectPrintClassNamePrefixType((PetscObject)A,viewer,"Matrix Object");CHKERRQ(ierr);
83       a->emat->Print("Elemental matrix (cyclic ordering)");
84       ierr = PetscViewerASCIIUseTabs(viewer,PETSC_TRUE);CHKERRQ(ierr);
85       if (A->factortype == MAT_FACTOR_NONE){
86         Mat Adense;
87         ierr = PetscPrintf(((PetscObject)viewer)->comm,"Elemental matrix (explicit ordering)\n");CHKERRQ(ierr);
88         ierr = MatConvert(A,MATDENSE,MAT_INITIAL_MATRIX,&Adense);CHKERRQ(ierr);
89         ierr = MatView(Adense,viewer);CHKERRQ(ierr);
90         ierr = MatDestroy(&Adense);CHKERRQ(ierr);
91       }
92     } else SETERRQ(((PetscObject)viewer)->comm,PETSC_ERR_SUP,"Format");
93   } else {
94     /* convert to dense format and call MatView() */
95     Mat Adense;
96     ierr = PetscPrintf(((PetscObject)viewer)->comm,"Elemental matrix (explicit ordering)\n");CHKERRQ(ierr);
97     ierr = MatConvert(A,MATDENSE,MAT_INITIAL_MATRIX,&Adense);CHKERRQ(ierr);
98     ierr = MatView(Adense,viewer);CHKERRQ(ierr);
99     ierr = MatDestroy(&Adense);CHKERRQ(ierr);
100   }
101   PetscFunctionReturn(0);
102 }
103 
104 #undef __FUNCT__
105 #define __FUNCT__ "MatGetInfo_Elemental"
106 static PetscErrorCode MatGetInfo_Elemental(Mat A,MatInfoType flag,MatInfo *info)
107 {
108   Mat_Elemental  *a = (Mat_Elemental*)A->data;
109   PetscMPIInt    rank;
110 
111   PetscFunctionBegin;
112   MPI_Comm_rank(((PetscObject)A)->comm,&rank);
113 
114   /* if (!rank) printf("          .........MatGetInfo_Elemental ...\n"); */
115   info->block_size     = 1.0;
116 
117   if (flag == MAT_LOCAL) {
118     info->nz_allocated   = (double)(*a->emat).AllocatedMemory(); /* locally allocated */
119     info->nz_used        = info->nz_allocated;
120   } else if (flag == MAT_GLOBAL_MAX) {
121     //ierr = MPI_Allreduce(isend,irecv,5,MPIU_REAL,MPIU_MAX,((PetscObject)matin)->comm);CHKERRQ(ierr);
122     /* see MatGetInfo_MPIAIJ() for getting global info->nz_allocated! */
123     //SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP," MAT_GLOBAL_MAX not written yet");
124   } else if (flag == MAT_GLOBAL_SUM) {
125     //SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP," MAT_GLOBAL_SUM not written yet");
126     info->nz_allocated   = (double)(*a->emat).AllocatedMemory(); /* locally allocated */
127     info->nz_used        = info->nz_allocated; /* assume Elemental does accurate allocation */
128     //ierr = MPI_Allreduce(isend,irecv,1,MPIU_REAL,MPIU_SUM,((PetscObject)A)->comm);CHKERRQ(ierr);
129     //PetscPrintf(PETSC_COMM_SELF,"    ... [%d] locally allocated %g\n",rank,info->nz_allocated);
130   }
131 
132   info->nz_unneeded       = 0.0;
133   info->assemblies        = (double)A->num_ass;
134   info->mallocs           = 0;
135   info->memory            = ((PetscObject)A)->mem;
136   info->fill_ratio_given  = 0; /* determined by Elemental */
137   info->fill_ratio_needed = 0;
138   info->factor_mallocs    = 0;
139   PetscFunctionReturn(0);
140 }
141 
142 #undef __FUNCT__
143 #define __FUNCT__ "MatSetValues_Elemental"
144 static PetscErrorCode MatSetValues_Elemental(Mat A,PetscInt nr,const PetscInt *rows,PetscInt nc,const PetscInt *cols,const PetscScalar *vals,InsertMode imode)
145 {
146   PetscErrorCode ierr;
147   Mat_Elemental  *a = (Mat_Elemental*)A->data;
148   PetscMPIInt    rank;
149   PetscInt       i,j,rrank,ridx,crank,cidx;
150 
151   PetscFunctionBegin;
152   ierr = MPI_Comm_rank(((PetscObject)A)->comm,&rank);CHKERRQ(ierr);
153 
154   const elem::Grid &grid = a->emat->Grid();
155   for (i=0; i<nr; i++) {
156     PetscInt erow,ecol,elrow,elcol;
157     if (rows[i] < 0) continue;
158     P2RO(A,0,rows[i],&rrank,&ridx);
159     RO2E(A,0,rrank,ridx,&erow);
160     if (rrank < 0 || ridx < 0 || erow < 0) SETERRQ(((PetscObject)A)->comm,PETSC_ERR_PLIB,"Incorrect row translation");
161     for (j=0; j<nc; j++) {
162       if (cols[j] < 0) continue;
163       P2RO(A,1,cols[j],&crank,&cidx);
164       RO2E(A,1,crank,cidx,&ecol);
165       if (crank < 0 || cidx < 0 || ecol < 0) SETERRQ(((PetscObject)A)->comm,PETSC_ERR_PLIB,"Incorrect col translation");
166       if (erow % grid.MCSize() != grid.MCRank() || ecol % grid.MRSize() != grid.MRRank()){ /* off-proc entry */
167         if (imode != ADD_VALUES) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Only ADD_VALUES to off-processor entry is supported");
168         /* PetscPrintf(PETSC_COMM_SELF,"[%D] add off-proc entry (%D,%D, %g) (%D %D)\n",rank,rows[i],cols[j],*(vals+i*nc),erow,ecol); */
169         a->esubmat->Set(0,0, (PetscElemScalar)vals[i*nc+j]);
170         a->interface->Axpy(1.0,*(a->esubmat),erow,ecol);
171         continue;
172       }
173       elrow = erow / grid.MCSize();
174       elcol = ecol / grid.MRSize();
175       switch (imode) {
176       case INSERT_VALUES: a->emat->SetLocal(elrow,elcol,(PetscElemScalar)vals[i*nc+j]); break;
177       case ADD_VALUES: a->emat->UpdateLocal(elrow,elcol,(PetscElemScalar)vals[i*nc+j]); break;
178       default: SETERRQ1(((PetscObject)A)->comm,PETSC_ERR_SUP,"No support for InsertMode %d",(int)imode);
179       }
180     }
181   }
182   PetscFunctionReturn(0);
183 }
184 
185 #undef __FUNCT__
186 #define __FUNCT__ "MatMult_Elemental"
187 static PetscErrorCode MatMult_Elemental(Mat A,Vec X,Vec Y)
188 {
189   Mat_Elemental         *a = (Mat_Elemental*)A->data;
190   PetscErrorCode        ierr;
191   const PetscElemScalar *x;
192   PetscElemScalar       *y;
193   PetscElemScalar       one = 1,zero = 0;
194 
195   PetscFunctionBegin;
196   ierr = VecGetArrayRead(X,(const PetscScalar **)&x);CHKERRQ(ierr);
197   ierr = VecGetArray(Y,(PetscScalar **)&y);CHKERRQ(ierr);
198   { /* Scoping so that constructor is called before pointer is returned */
199     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> xe(A->cmap->N,1,0,x,A->cmap->n,*a->grid);
200     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> ye(A->rmap->N,1,0,y,A->rmap->n,*a->grid);
201     elem::Gemv(elem::NORMAL,one,*a->emat,xe,zero,ye);
202   }
203   ierr = VecRestoreArrayRead(X,(const PetscScalar **)&x);CHKERRQ(ierr);
204   ierr = VecRestoreArray(Y,(PetscScalar **)&y);CHKERRQ(ierr);
205   PetscFunctionReturn(0);
206 }
207 
208 #undef __FUNCT__
209 #define __FUNCT__ "MatMultTranspose_Elemental"
210 static PetscErrorCode MatMultTranspose_Elemental(Mat A,Vec X,Vec Y)
211 {
212   Mat_Elemental         *a = (Mat_Elemental*)A->data;
213   PetscErrorCode        ierr;
214   const PetscElemScalar *x;
215   PetscElemScalar       *y;
216   PetscElemScalar       one = 1,zero = 0;
217 
218   PetscFunctionBegin;
219   ierr = VecGetArrayRead(X,(const PetscScalar **)&x);CHKERRQ(ierr);
220   ierr = VecGetArray(Y,(PetscScalar **)&y);CHKERRQ(ierr);
221   { /* Scoping so that constructor is called before pointer is returned */
222     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> xe(A->rmap->N,1,0,x,A->rmap->n,*a->grid);
223     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> ye(A->cmap->N,1,0,y,A->cmap->n,*a->grid);
224     elem::Gemv(elem::TRANSPOSE,one,*a->emat,xe,zero,ye);
225   }
226   ierr = VecRestoreArrayRead(X,(const PetscScalar **)&x);CHKERRQ(ierr);
227   ierr = VecRestoreArray(Y,(PetscScalar **)&y);CHKERRQ(ierr);
228   PetscFunctionReturn(0);
229 }
230 
231 #undef __FUNCT__
232 #define __FUNCT__ "MatMultAdd_Elemental"
233 static PetscErrorCode MatMultAdd_Elemental(Mat A,Vec X,Vec Y,Vec Z)
234 {
235   Mat_Elemental         *a = (Mat_Elemental*)A->data;
236   PetscErrorCode        ierr;
237   const PetscElemScalar *x;
238   PetscElemScalar       *z;
239   PetscElemScalar       one = 1;
240 
241   PetscFunctionBegin;
242   if (Y != Z) {ierr = VecCopy(Y,Z);CHKERRQ(ierr);}
243   ierr = VecGetArrayRead(X,(const PetscScalar **)&x);CHKERRQ(ierr);
244   ierr = VecGetArray(Z,(PetscScalar **)&z);CHKERRQ(ierr);
245   { /* Scoping so that constructor is called before pointer is returned */
246     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> xe(A->cmap->N,1,0,x,A->cmap->n,*a->grid);
247     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> ze(A->rmap->N,1,0,z,A->rmap->n,*a->grid);
248     elem::Gemv(elem::NORMAL,one,*a->emat,xe,one,ze);
249   }
250   ierr = VecRestoreArrayRead(X,(const PetscScalar **)&x);CHKERRQ(ierr);
251   ierr = VecRestoreArray(Z,(PetscScalar **)&z);CHKERRQ(ierr);
252   PetscFunctionReturn(0);
253 }
254 
255 #undef __FUNCT__
256 #define __FUNCT__ "MatMultTransposeAdd_Elemental"
257 static PetscErrorCode MatMultTransposeAdd_Elemental(Mat A,Vec X,Vec Y,Vec Z)
258 {
259   Mat_Elemental         *a = (Mat_Elemental*)A->data;
260   PetscErrorCode        ierr;
261   const PetscElemScalar *x;
262   PetscElemScalar       *z;
263   PetscElemScalar       one = 1;
264 
265   PetscFunctionBegin;
266   if (Y != Z) {ierr = VecCopy(Y,Z);CHKERRQ(ierr);}
267   ierr = VecGetArrayRead(X,(const PetscScalar **)&x);CHKERRQ(ierr);
268   ierr = VecGetArray(Z,(PetscScalar **)&z);CHKERRQ(ierr);
269   { /* Scoping so that constructor is called before pointer is returned */
270     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> xe(A->rmap->N,1,0,x,A->rmap->n,*a->grid);
271     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> ze(A->cmap->N,1,0,z,A->cmap->n,*a->grid);
272     elem::Gemv(elem::TRANSPOSE,one,*a->emat,xe,one,ze);
273   }
274   ierr = VecRestoreArrayRead(X,(const PetscScalar **)&x);CHKERRQ(ierr);
275   ierr = VecRestoreArray(Z,(PetscScalar **)&z);CHKERRQ(ierr);
276   PetscFunctionReturn(0);
277 }
278 
279 #undef __FUNCT__
280 #define __FUNCT__ "MatMatMultNumeric_Elemental"
281 static PetscErrorCode MatMatMultNumeric_Elemental(Mat A,Mat B,Mat C)
282 {
283   Mat_Elemental    *a = (Mat_Elemental*)A->data;
284   Mat_Elemental    *b = (Mat_Elemental*)B->data;
285   Mat_Elemental    *c = (Mat_Elemental*)C->data;
286   PetscElemScalar  one = 1,zero = 0;
287 
288   PetscFunctionBegin;
289   { /* Scoping so that constructor is called before pointer is returned */
290     elem::Gemm(elem::NORMAL,elem::NORMAL,one,*a->emat,*b->emat,zero,*c->emat);
291   }
292   C->assembled = PETSC_TRUE;
293   PetscFunctionReturn(0);
294 }
295 
296 #undef __FUNCT__
297 #define __FUNCT__ "MatMatMultSymbolic_Elemental"
298 static PetscErrorCode MatMatMultSymbolic_Elemental(Mat A,Mat B,PetscReal fill,Mat *C)
299 {
300   PetscErrorCode ierr;
301   Mat            Ce;
302   MPI_Comm       comm=((PetscObject)A)->comm;
303 
304   PetscFunctionBegin;
305   ierr = MatCreate(comm,&Ce);CHKERRQ(ierr);
306   ierr = MatSetSizes(Ce,A->rmap->n,B->cmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
307   ierr = MatSetType(Ce,MATELEMENTAL);CHKERRQ(ierr);
308   ierr = MatSetUp(Ce);CHKERRQ(ierr);
309   *C = Ce;
310   PetscFunctionReturn(0);
311 }
312 
313 #undef __FUNCT__
314 #define __FUNCT__ "MatMatMult_Elemental"
315 static PetscErrorCode MatMatMult_Elemental(Mat A,Mat B,MatReuse scall,PetscReal fill,Mat *C)
316 {
317   PetscErrorCode ierr;
318 
319   PetscFunctionBegin;
320   if (scall == MAT_INITIAL_MATRIX){
321     ierr = PetscLogEventBegin(MAT_MatMultSymbolic,A,B,0,0);CHKERRQ(ierr);
322     ierr = MatMatMultSymbolic_Elemental(A,B,1.0,C);CHKERRQ(ierr);
323     ierr = PetscLogEventEnd(MAT_MatMultSymbolic,A,B,0,0);CHKERRQ(ierr);
324   }
325   ierr = PetscLogEventBegin(MAT_MatMultNumeric,A,B,0,0);CHKERRQ(ierr);
326   ierr = MatMatMultNumeric_Elemental(A,B,*C);CHKERRQ(ierr);
327   ierr = PetscLogEventEnd(MAT_MatMultNumeric,A,B,0,0);CHKERRQ(ierr);
328   PetscFunctionReturn(0);
329 }
330 
331 #undef __FUNCT__
332 #define __FUNCT__ "MatMatTransposeMultNumeric_Elemental"
333 static PetscErrorCode MatMatTransposeMultNumeric_Elemental(Mat A,Mat B,Mat C)
334 {
335   Mat_Elemental      *a = (Mat_Elemental*)A->data;
336   Mat_Elemental      *b = (Mat_Elemental*)B->data;
337   Mat_Elemental      *c = (Mat_Elemental*)C->data;
338   PetscElemScalar    one = 1,zero = 0;
339 
340   PetscFunctionBegin;
341   { /* Scoping so that constructor is called before pointer is returned */
342     elem::Gemm(elem::NORMAL,elem::TRANSPOSE,one,*a->emat,*b->emat,zero,*c->emat);
343   }
344   C->assembled = PETSC_TRUE;
345   PetscFunctionReturn(0);
346 }
347 
348 #undef __FUNCT__
349 #define __FUNCT__ "MatMatTransposeMultSymbolic_Elemental"
350 static PetscErrorCode MatMatTransposeMultSymbolic_Elemental(Mat A,Mat B,PetscReal fill,Mat *C)
351 {
352   PetscErrorCode ierr;
353   Mat            Ce;
354   MPI_Comm       comm=((PetscObject)A)->comm;
355 
356   PetscFunctionBegin;
357   ierr = MatCreate(comm,&Ce);CHKERRQ(ierr);
358   ierr = MatSetSizes(Ce,A->rmap->n,B->rmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
359   ierr = MatSetType(Ce,MATELEMENTAL);CHKERRQ(ierr);
360   ierr = MatSetUp(Ce);CHKERRQ(ierr);
361   *C = Ce;
362   PetscFunctionReturn(0);
363 }
364 
365 #undef __FUNCT__
366 #define __FUNCT__ "MatMatTransposeMult_Elemental"
367 static PetscErrorCode MatMatTransposeMult_Elemental(Mat A,Mat B,MatReuse scall,PetscReal fill,Mat *C)
368 {
369   PetscErrorCode ierr;
370 
371   PetscFunctionBegin;
372   if (scall == MAT_INITIAL_MATRIX){
373     ierr = PetscLogEventBegin(MAT_MatTransposeMultSymbolic,A,B,0,0);CHKERRQ(ierr);
374     ierr = MatMatMultSymbolic_Elemental(A,B,1.0,C);CHKERRQ(ierr);
375     ierr = PetscLogEventEnd(MAT_MatTransposeMultSymbolic,A,B,0,0);CHKERRQ(ierr);
376   }
377   ierr = PetscLogEventBegin(MAT_MatTransposeMultNumeric,A,B,0,0);CHKERRQ(ierr);
378   ierr = MatMatTransposeMultNumeric_Elemental(A,B,*C);CHKERRQ(ierr);
379   ierr = PetscLogEventEnd(MAT_MatTransposeMultNumeric,A,B,0,0);CHKERRQ(ierr);
380   PetscFunctionReturn(0);
381 }
382 
383 #undef __FUNCT__
384 #define __FUNCT__ "MatGetDiagonal_Elemental"
385 static PetscErrorCode MatGetDiagonal_Elemental(Mat X,Vec D)
386 {
387   Mat_Elemental   *x = (Mat_Elemental*)X->data;
388   PetscElemScalar *d;
389   PetscErrorCode  ierr;
390 
391   PetscFunctionBegin;
392   ierr = VecGetArray(D,(PetscScalar **)&d);CHKERRQ(ierr);
393   if (X->rmap->N > X->cmap->N) {
394     elem::DistMatrix<PetscElemScalar,elem::MD,elem::STAR> de(X->cmap->N,1,0,d,X->cmap->n,*x->grid);
395     x->emat->GetDiagonal(de,0);
396   } else {
397     elem::DistMatrix<PetscElemScalar,elem::MD,elem::STAR> de(X->rmap->N,1,0,d,X->rmap->n,*x->grid);
398     x->emat->GetDiagonal(de,0);
399   }
400   ierr = VecRestoreArray(D,(PetscScalar **)&d);CHKERRQ(ierr);
401   PetscFunctionReturn(0);
402 }
403 
404 #undef __FUNCT__
405 #define __FUNCT__ "MatDiagonalScale_Elemental"
406 static PetscErrorCode MatDiagonalScale_Elemental(Mat X,Vec L,Vec R)
407 {
408   Mat_Elemental         *x = (Mat_Elemental*)X->data;
409   const PetscElemScalar *d;
410   PetscErrorCode        ierr;
411 
412   PetscFunctionBegin;
413   if (L == PETSC_NULL) {
414     ierr = VecGetArrayRead(R,(const PetscScalar **)&d);CHKERRQ(ierr);
415     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> de(X->cmap->N,1,0,d,X->cmap->n,*x->grid);
416     elem::DiagonalScale(elem::RIGHT,elem::NORMAL,de,*x->emat);
417     ierr = VecRestoreArrayRead(R,(const PetscScalar **)&d);CHKERRQ(ierr);
418   } else {
419     ierr = VecGetArrayRead(L,(const PetscScalar **)&d);CHKERRQ(ierr);
420     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> de(X->rmap->N,1,0,d,X->rmap->n,*x->grid);
421     elem::DiagonalScale(elem::LEFT,elem::NORMAL,de,*x->emat);
422     ierr = VecRestoreArrayRead(L,(const PetscScalar **)&d);CHKERRQ(ierr);
423   }
424   PetscFunctionReturn(0);
425 }
426 
427 #undef __FUNCT__
428 #define __FUNCT__ "MatScale_Elemental"
429 static PetscErrorCode MatScale_Elemental(Mat X,PetscScalar a)
430 {
431   Mat_Elemental  *x = (Mat_Elemental*)X->data;
432 
433   PetscFunctionBegin;
434   elem::Scal((PetscElemScalar)a,*x->emat);
435   PetscFunctionReturn(0);
436 }
437 
438 #undef __FUNCT__
439 #define __FUNCT__ "MatAXPY_Elemental"
440 static PetscErrorCode MatAXPY_Elemental(Mat Y,PetscScalar a,Mat X,MatStructure str)
441 {
442   Mat_Elemental  *x = (Mat_Elemental*)X->data;
443   Mat_Elemental  *y = (Mat_Elemental*)Y->data;
444 
445   PetscFunctionBegin;
446   elem::Axpy((PetscElemScalar)a,*x->emat,*y->emat);
447   PetscFunctionReturn(0);
448 }
449 
450 #undef __FUNCT__
451 #define __FUNCT__ "MatCopy_Elemental"
452 static PetscErrorCode MatCopy_Elemental(Mat A,Mat B,MatStructure str)
453 {
454   Mat_Elemental *a=(Mat_Elemental*)A->data;
455   Mat_Elemental *b=(Mat_Elemental*)B->data;
456 
457   PetscFunctionBegin;
458   elem::Copy(*a->emat,*b->emat);
459   PetscFunctionReturn(0);
460 }
461 
462 #undef __FUNCT__
463 #define __FUNCT__ "MatDuplicate_Elemental"
464 static PetscErrorCode MatDuplicate_Elemental(Mat A,MatDuplicateOption op,Mat *B)
465 {
466   Mat            Be;
467   MPI_Comm       comm=((PetscObject)A)->comm;
468   Mat_Elemental  *a=(Mat_Elemental*)A->data;
469   PetscErrorCode ierr;
470 
471   PetscFunctionBegin;
472   ierr = MatCreate(comm,&Be);CHKERRQ(ierr);
473   ierr = MatSetSizes(Be,A->rmap->n,A->cmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
474   ierr = MatSetType(Be,MATELEMENTAL);CHKERRQ(ierr);
475   ierr = MatSetUp(Be);CHKERRQ(ierr);
476   *B = Be;
477   if (op == MAT_COPY_VALUES) {
478     Mat_Elemental *b=(Mat_Elemental*)Be->data;
479     elem::Copy(*a->emat,*b->emat);
480   }
481   Be->assembled = PETSC_TRUE;
482   PetscFunctionReturn(0);
483 }
484 
485 #undef __FUNCT__
486 #define __FUNCT__ "MatTranspose_Elemental"
487 static PetscErrorCode MatTranspose_Elemental(Mat A,MatReuse reuse,Mat *B)
488 {
489   Mat            Be;
490   PetscErrorCode ierr;
491   MPI_Comm       comm=((PetscObject)A)->comm;
492   Mat_Elemental  *a = (Mat_Elemental*)A->data, *b;
493 
494   PetscFunctionBegin;
495   /* Only out-of-place supported */
496   if (reuse == MAT_INITIAL_MATRIX){
497     ierr = MatCreate(comm,&Be);CHKERRQ(ierr);
498     ierr = MatSetSizes(Be,A->cmap->n,A->rmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
499     ierr = MatSetType(Be,MATELEMENTAL);CHKERRQ(ierr);
500     ierr = MatSetUp(Be);CHKERRQ(ierr);
501     *B = Be;
502   }
503   b = (Mat_Elemental*)Be->data;
504   elem::Transpose(*a->emat,*b->emat);
505   Be->assembled = PETSC_TRUE;
506   PetscFunctionReturn(0);
507 }
508 
509 #undef __FUNCT__
510 #define __FUNCT__ "MatConjugate_Elemental"
511 static PetscErrorCode MatConjugate_Elemental(Mat A)
512 {
513   Mat_Elemental  *a = (Mat_Elemental*)A->data;
514 
515   PetscFunctionBegin;
516   elem::Conjugate(*a->emat);
517   PetscFunctionReturn(0);
518 }
519 
520 #undef __FUNCT__
521 #define __FUNCT__ "MatHermitianTranspose_Elemental"
522 static PetscErrorCode MatHermitianTranspose_Elemental(Mat A,MatReuse reuse,Mat *B)
523 {
524   Mat            Be;
525   PetscErrorCode ierr;
526   MPI_Comm       comm=((PetscObject)A)->comm;
527   Mat_Elemental  *a = (Mat_Elemental*)A->data, *b;
528 
529   PetscFunctionBegin;
530   /* Only out-of-place supported */
531   if (reuse == MAT_INITIAL_MATRIX){
532     ierr = MatCreate(comm,&Be);CHKERRQ(ierr);
533     ierr = MatSetSizes(Be,A->cmap->n,A->rmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
534     ierr = MatSetType(Be,MATELEMENTAL);CHKERRQ(ierr);
535     ierr = MatSetUp(Be);CHKERRQ(ierr);
536     *B = Be;
537   }
538   b = (Mat_Elemental*)Be->data;
539   elem::Adjoint(*a->emat,*b->emat);
540   Be->assembled = PETSC_TRUE;
541   PetscFunctionReturn(0);
542 }
543 
544 #undef __FUNCT__
545 #define __FUNCT__ "MatSolve_Elemental"
546 static PetscErrorCode MatSolve_Elemental(Mat A,Vec B,Vec X)
547 {
548   Mat_Elemental     *a = (Mat_Elemental*)A->data;
549   PetscErrorCode    ierr;
550   PetscElemScalar   *x;
551 
552   PetscFunctionBegin;
553   ierr = VecCopy(B,X);CHKERRQ(ierr);
554   ierr = VecGetArray(X,(PetscScalar **)&x);CHKERRQ(ierr);
555   elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> xe(A->rmap->N,1,0,x,A->rmap->n,*a->grid);
556   elem::DistMatrix<PetscElemScalar,elem::MC,elem::MR> xer = xe;
557   switch (A->factortype) {
558   case MAT_FACTOR_LU:
559     if ((*a->pivot).AllocatedMemory()) {
560       elem::SolveAfterLU(elem::NORMAL,*a->emat,*a->pivot,xer);
561       elem::Copy(xer,xe);
562     } else {
563       elem::SolveAfterLU(elem::NORMAL,*a->emat,xer);
564       elem::Copy(xer,xe);
565     }
566     break;
567   case MAT_FACTOR_CHOLESKY:
568     elem::SolveAfterCholesky(elem::UPPER,elem::NORMAL,*a->emat,xer);
569     elem::Copy(xer,xe);
570     break;
571   default:
572     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Unfactored Matrix or Unsupported MatFactorType");
573     break;
574   }
575   ierr = VecRestoreArray(X,(PetscScalar **)&x);CHKERRQ(ierr);
576   PetscFunctionReturn(0);
577 }
578 
579 #undef __FUNCT__
580 #define __FUNCT__ "MatSolveAdd_Elemental"
581 static PetscErrorCode MatSolveAdd_Elemental(Mat A,Vec B,Vec Y,Vec X)
582 {
583   PetscErrorCode    ierr;
584 
585   PetscFunctionBegin;
586   ierr = MatSolve_Elemental(A,B,X);CHKERRQ(ierr);
587   ierr = VecAXPY(X,1,Y);CHKERRQ(ierr);
588   PetscFunctionReturn(0);
589 }
590 
591 #undef __FUNCT__
592 #define __FUNCT__ "MatMatSolve_Elemental"
593 static PetscErrorCode MatMatSolve_Elemental(Mat A,Mat B,Mat X)
594 {
595   Mat_Elemental *a=(Mat_Elemental*)A->data;
596   Mat_Elemental *b=(Mat_Elemental*)B->data;
597   Mat_Elemental *x=(Mat_Elemental*)X->data;
598 
599   PetscFunctionBegin;
600   elem::Copy(*b->emat,*x->emat);
601   switch (A->factortype) {
602   case MAT_FACTOR_LU:
603     if ((*a->pivot).AllocatedMemory()) {
604       elem::SolveAfterLU(elem::NORMAL,*a->emat,*a->pivot,*x->emat);
605     } else {
606       elem::SolveAfterLU(elem::NORMAL,*a->emat,*x->emat);
607     }
608     break;
609   case MAT_FACTOR_CHOLESKY:
610     elem::SolveAfterCholesky(elem::UPPER,elem::NORMAL,*a->emat,*x->emat);
611     break;
612   default:
613     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Unfactored Matrix or Unsupported MatFactorType");
614     break;
615   }
616   PetscFunctionReturn(0);
617 }
618 
619 #undef __FUNCT__
620 #define __FUNCT__ "MatLUFactor_Elemental"
621 static PetscErrorCode MatLUFactor_Elemental(Mat A,IS row,IS col,const MatFactorInfo *info)
622 {
623   Mat_Elemental  *a = (Mat_Elemental*)A->data;
624 
625   PetscFunctionBegin;
626   if (info->dtcol){
627     elem::LU(*a->emat,*a->pivot);
628   } else {
629     elem::LU(*a->emat);
630   }
631   A->factortype = MAT_FACTOR_LU;
632   A->assembled  = PETSC_TRUE;
633   PetscFunctionReturn(0);
634 }
635 
636 #undef __FUNCT__
637 #define __FUNCT__ "MatLUFactorNumeric_Elemental"
638 static PetscErrorCode  MatLUFactorNumeric_Elemental(Mat F,Mat A,const MatFactorInfo *info)
639 {
640   PetscErrorCode ierr;
641 
642   PetscFunctionBegin;
643   ierr = MatCopy(A,F,SAME_NONZERO_PATTERN);CHKERRQ(ierr);
644   ierr = MatLUFactor_Elemental(F,0,0,info);CHKERRQ(ierr);
645   PetscFunctionReturn(0);
646 }
647 
648 #undef __FUNCT__
649 #define __FUNCT__ "MatLUFactorSymbolic_Elemental"
650 static PetscErrorCode  MatLUFactorSymbolic_Elemental(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info)
651 {
652   PetscFunctionBegin;
653   /* F is create and allocated by MatGetFactor_elemental_petsc(), skip this routine. */
654   PetscFunctionReturn(0);
655 }
656 
657 #undef __FUNCT__
658 #define __FUNCT__ "MatCholeskyFactor_Elemental"
659 static PetscErrorCode MatCholeskyFactor_Elemental(Mat A,IS perm,const MatFactorInfo *info)
660 {
661   Mat_Elemental  *a = (Mat_Elemental*)A->data;
662   elem::DistMatrix<PetscElemScalar,elem::MC,elem::STAR> d;
663 
664   PetscFunctionBegin;
665   elem::Cholesky(elem::UPPER,*a->emat);
666   A->factortype = MAT_FACTOR_CHOLESKY;
667   A->assembled  = PETSC_TRUE;
668   PetscFunctionReturn(0);
669 }
670 
671 #undef __FUNCT__
672 #define __FUNCT__ "MatCholeskyFactorNumeric_Elemental"
673 static PetscErrorCode MatCholeskyFactorNumeric_Elemental(Mat F,Mat A,const MatFactorInfo *info)
674 {
675   PetscErrorCode ierr;
676 
677   PetscFunctionBegin;
678   ierr = MatCopy(A,F,SAME_NONZERO_PATTERN);CHKERRQ(ierr);
679   ierr = MatCholeskyFactor_Elemental(F,0,info);CHKERRQ(ierr);
680   PetscFunctionReturn(0);
681 }
682 
683 #undef __FUNCT__
684 #define __FUNCT__ "MatCholeskyFactorSymbolic_Elemental"
685 static PetscErrorCode MatCholeskyFactorSymbolic_Elemental(Mat F,Mat A,IS perm,const MatFactorInfo *info)
686 {
687   PetscFunctionBegin;
688   /* F is create and allocated by MatGetFactor_elemental_petsc(), skip this routine. */
689   PetscFunctionReturn(0);
690 }
691 
692 EXTERN_C_BEGIN
693 #undef __FUNCT__
694 #define __FUNCT__ "MatFactorGetSolverPackage_elemental_elemental"
695 PetscErrorCode MatFactorGetSolverPackage_elemental_elemental(Mat A,const MatSolverPackage *type)
696 {
697   PetscFunctionBegin;
698   *type = MATSOLVERELEMENTAL;
699   PetscFunctionReturn(0);
700 }
701 EXTERN_C_END
702 
703 EXTERN_C_BEGIN
704 #undef __FUNCT__
705 #define __FUNCT__ "MatGetFactor_elemental_elemental"
706 static PetscErrorCode MatGetFactor_elemental_elemental(Mat A,MatFactorType ftype,Mat *F)
707 {
708   Mat            B;
709   PetscErrorCode ierr;
710 
711   PetscFunctionBegin;
712   /* Create the factorization matrix */
713   ierr = MatCreate(((PetscObject)A)->comm,&B);CHKERRQ(ierr);
714   ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
715   ierr = MatSetType(B,MATELEMENTAL);CHKERRQ(ierr);
716   ierr = MatSetUp(B);CHKERRQ(ierr);
717   B->factortype = ftype;
718   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatFactorGetSolverPackage_C","MatFactorGetSolverPackage_elemental_elemental",MatFactorGetSolverPackage_elemental_elemental);CHKERRQ(ierr);
719   *F            = B;
720   PetscFunctionReturn(0);
721 }
722 EXTERN_C_END
723 
724 #undef __FUNCT__
725 #define __FUNCT__ "MatNorm_Elemental"
726 static PetscErrorCode MatNorm_Elemental(Mat A,NormType type,PetscReal *nrm)
727 {
728   Mat_Elemental *a=(Mat_Elemental*)A->data;
729 
730   PetscFunctionBegin;
731   switch (type){
732   case NORM_1:
733     *nrm = elem::Norm(*a->emat,elem::ONE_NORM);
734     break;
735   case NORM_FROBENIUS:
736     *nrm = elem::Norm(*a->emat,elem::FROBENIUS_NORM);
737     break;
738   case NORM_INFINITY:
739     *nrm = elem::Norm(*a->emat,elem::INFINITY_NORM);
740     break;
741   default:
742     printf("Error: unsupported norm type!\n");
743   }
744   PetscFunctionReturn(0);
745 }
746 
747 #undef __FUNCT__
748 #define __FUNCT__ "MatZeroEntries_Elemental"
749 static PetscErrorCode MatZeroEntries_Elemental(Mat A)
750 {
751   Mat_Elemental *a=(Mat_Elemental*)A->data;
752 
753   PetscFunctionBegin;
754   elem::Zero(*a->emat);
755   PetscFunctionReturn(0);
756 }
757 
758 EXTERN_C_BEGIN
759 #undef __FUNCT__
760 #define __FUNCT__ "MatGetOwnershipIS_Elemental"
761 static PetscErrorCode MatGetOwnershipIS_Elemental(Mat A,IS *rows,IS *cols)
762 {
763   Mat_Elemental  *a = (Mat_Elemental*)A->data;
764   PetscErrorCode ierr;
765   PetscInt       i,m,shift,stride,*idx;
766 
767   PetscFunctionBegin;
768   if (rows) {
769     m = a->emat->LocalHeight();
770     shift = a->emat->ColShift();
771     stride = a->emat->ColStride();
772     ierr = PetscMalloc(m*sizeof(PetscInt),&idx);CHKERRQ(ierr);
773     for (i=0; i<m; i++) {
774       PetscInt rank,offset;
775       E2RO(A,0,shift+i*stride,&rank,&offset);
776       RO2P(A,0,rank,offset,&idx[i]);
777     }
778     ierr = ISCreateGeneral(PETSC_COMM_SELF,m,idx,PETSC_OWN_POINTER,rows);CHKERRQ(ierr);
779   }
780   if (cols) {
781     m = a->emat->LocalWidth();
782     shift = a->emat->RowShift();
783     stride = a->emat->RowStride();
784     ierr = PetscMalloc(m*sizeof(PetscInt),&idx);CHKERRQ(ierr);
785     for (i=0; i<m; i++) {
786       PetscInt rank,offset;
787       E2RO(A,1,shift+i*stride,&rank,&offset);
788       RO2P(A,1,rank,offset,&idx[i]);
789     }
790     ierr = ISCreateGeneral(PETSC_COMM_SELF,m,idx,PETSC_OWN_POINTER,cols);CHKERRQ(ierr);
791   }
792   PetscFunctionReturn(0);
793 }
794 EXTERN_C_END
795 
796 #undef __FUNCT__
797 #define __FUNCT__ "MatConvert_Elemental_Dense"
798 static PetscErrorCode MatConvert_Elemental_Dense(Mat A,const MatType newtype,MatReuse reuse,Mat *B)
799 {
800   Mat                Bmpi;
801   Mat_Elemental      *a = (Mat_Elemental*)A->data;
802   MPI_Comm           comm=((PetscObject)A)->comm;
803   PetscErrorCode     ierr;
804   PetscInt           rrank,ridx,crank,cidx,nrows,ncols,i,j;
805   PetscElemScalar    v;
806 
807   PetscFunctionBegin;
808   if (strcmp(newtype,MATDENSE) && strcmp(newtype,MATSEQDENSE) && strcmp(newtype,MATMPIDENSE)) {
809     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Unsupported New MatType: must be MATDENSE, MATSEQDENSE or MATMPIDENSE");
810   }
811   ierr = MatCreate(comm,&Bmpi);CHKERRQ(ierr);
812   ierr = MatSetSizes(Bmpi,A->rmap->n,A->cmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
813   ierr = MatSetType(Bmpi,MATDENSE);CHKERRQ(ierr);
814   ierr = MatSetUp(Bmpi);CHKERRQ(ierr);
815   ierr = MatGetSize(A,&nrows,&ncols);CHKERRQ(ierr);
816   for (i=0; i<nrows; i++) {
817     PetscInt erow,ecol;
818     P2RO(A,0,i,&rrank,&ridx);
819     RO2E(A,0,rrank,ridx,&erow);
820     if (rrank < 0 || ridx < 0 || erow < 0) SETERRQ(comm,PETSC_ERR_PLIB,"Incorrect row translation");
821     for (j=0; j<ncols; j++) {
822       P2RO(A,1,j,&crank,&cidx);
823       RO2E(A,1,crank,cidx,&ecol);
824       if (crank < 0 || cidx < 0 || ecol < 0) SETERRQ(comm,PETSC_ERR_PLIB,"Incorrect col translation");
825       v = a->emat->Get(erow,ecol);
826       ierr = MatSetValues(Bmpi,1,&i,1,&j,(PetscScalar *)&v,INSERT_VALUES);CHKERRQ(ierr);
827     }
828   }
829   ierr = MatAssemblyBegin(Bmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
830   ierr = MatAssemblyEnd(Bmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
831   if (reuse == MAT_REUSE_MATRIX) {
832     ierr = MatHeaderReplace(A,Bmpi);CHKERRQ(ierr);
833   } else {
834     *B = Bmpi;
835   }
836   PetscFunctionReturn(0);
837 }
838 
839 #undef __FUNCT__
840 #define __FUNCT__ "MatDestroy_Elemental"
841 static PetscErrorCode MatDestroy_Elemental(Mat A)
842 {
843   Mat_Elemental      *a = (Mat_Elemental*)A->data;
844   PetscErrorCode     ierr;
845   Mat_Elemental_Grid *commgrid;
846   PetscBool          flg;
847   MPI_Comm           icomm;
848 
849   PetscFunctionBegin;
850   a->interface->Detach();
851   delete a->interface;
852   delete a->esubmat;
853   delete a->emat;
854 
855   elem::mpi::Comm cxxcomm(((PetscObject)A)->comm);
856   ierr = PetscCommDuplicate(cxxcomm,&icomm,PETSC_NULL);CHKERRQ(ierr);
857   ierr = MPI_Attr_get(icomm,Petsc_Elemental_keyval,(void**)&commgrid,(int*)&flg);CHKERRQ(ierr);
858   if (--commgrid->grid_refct == 0) {
859     delete commgrid->grid;
860     ierr = PetscFree(commgrid);CHKERRQ(ierr);
861   }
862   ierr = PetscCommDestroy(&icomm);CHKERRQ(ierr);
863   ierr = PetscObjectComposeFunctionDynamic((PetscObject)A,"MatGetOwnershipIS_C","",PETSC_NULL);CHKERRQ(ierr);
864   ierr = PetscObjectComposeFunctionDynamic((PetscObject)A,"MatGetFactor_petsc_C","",PETSC_NULL);CHKERRQ(ierr);
865   ierr = PetscObjectComposeFunctionDynamic((PetscObject)A,"MatFactorGetSolverPackage_C","",PETSC_NULL);CHKERRQ(ierr);
866   ierr = PetscFree(A->data);CHKERRQ(ierr);
867   PetscFunctionReturn(0);
868 }
869 
870 #undef __FUNCT__
871 #define __FUNCT__ "MatSetUp_Elemental"
872 PetscErrorCode MatSetUp_Elemental(Mat A)
873 {
874   Mat_Elemental  *a = (Mat_Elemental*)A->data;
875   PetscErrorCode ierr;
876   PetscMPIInt    rsize,csize;
877 
878   PetscFunctionBegin;
879   ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr);
880   ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr);
881 
882   a->emat->ResizeTo(A->rmap->N,A->cmap->N);CHKERRQ(ierr);
883   elem::Zero(*a->emat);
884 
885   ierr = MPI_Comm_size(A->rmap->comm,&rsize);CHKERRQ(ierr);
886   ierr = MPI_Comm_size(A->cmap->comm,&csize);CHKERRQ(ierr);
887   if (csize != rsize) SETERRQ(((PetscObject)A)->comm,PETSC_ERR_ARG_INCOMP,"Cannot use row and column communicators of different sizes");
888   a->commsize = rsize;
889   a->mr[0] = A->rmap->N % rsize; if (!a->mr[0]) a->mr[0] = rsize;
890   a->mr[1] = A->cmap->N % csize; if (!a->mr[1]) a->mr[1] = csize;
891   a->m[0]  = A->rmap->N / rsize + (a->mr[0] != rsize);
892   a->m[1]  = A->cmap->N / csize + (a->mr[1] != csize);
893   PetscFunctionReturn(0);
894 }
895 
896 #undef __FUNCT__
897 #define __FUNCT__ "MatAssemblyBegin_Elemental"
898 PetscErrorCode MatAssemblyBegin_Elemental(Mat A, MatAssemblyType type)
899 {
900   Mat_Elemental  *a = (Mat_Elemental*)A->data;
901 
902   PetscFunctionBegin;
903   a->interface->Detach();
904   a->interface->Attach(elem::LOCAL_TO_GLOBAL,*(a->emat));
905   PetscFunctionReturn(0);
906 }
907 
908 #undef __FUNCT__
909 #define __FUNCT__ "MatAssemblyEnd_Elemental"
910 PetscErrorCode MatAssemblyEnd_Elemental(Mat A, MatAssemblyType type)
911 {
912   PetscFunctionBegin;
913   /* Currently does nothing */
914   PetscFunctionReturn(0);
915 }
916 
917 /* -------------------------------------------------------------------*/
918 static struct _MatOps MatOps_Values = {
919        MatSetValues_Elemental,
920        0,
921        0,
922        MatMult_Elemental,
923 /* 4*/ MatMultAdd_Elemental,
924        MatMultTranspose_Elemental,
925        MatMultTransposeAdd_Elemental,
926        MatSolve_Elemental,
927        MatSolveAdd_Elemental,
928        0, //MatSolveTranspose_Elemental,
929 /*10*/ 0, //MatSolveTransposeAdd_Elemental,
930        MatLUFactor_Elemental,
931        MatCholeskyFactor_Elemental,
932        0,
933        MatTranspose_Elemental,
934 /*15*/ MatGetInfo_Elemental,
935        0,
936        MatGetDiagonal_Elemental,
937        MatDiagonalScale_Elemental,
938        MatNorm_Elemental,
939 /*20*/ MatAssemblyBegin_Elemental,
940        MatAssemblyEnd_Elemental,
941        0, //MatSetOption_Elemental,
942        MatZeroEntries_Elemental,
943 /*24*/ 0,
944        MatLUFactorSymbolic_Elemental,
945        MatLUFactorNumeric_Elemental,
946        MatCholeskyFactorSymbolic_Elemental,
947        MatCholeskyFactorNumeric_Elemental,
948 /*29*/ MatSetUp_Elemental,
949        0,
950        0,
951        0,
952        0,
953 /*34*/ MatDuplicate_Elemental,
954        0,
955        0,
956        0,
957        0,
958 /*39*/ MatAXPY_Elemental,
959        0,
960        0,
961        0,
962        MatCopy_Elemental,
963 /*44*/ 0,
964        MatScale_Elemental,
965        0,
966        0,
967        0,
968 /*49*/ 0,
969        0,
970        0,
971        0,
972        0,
973 /*54*/ 0,
974        0,
975        0,
976        0,
977        0,
978 /*59*/ 0,
979        MatDestroy_Elemental,
980        MatView_Elemental,
981        0,
982        0,
983 /*64*/ 0,
984        0,
985        0,
986        0,
987        0,
988 /*69*/ 0,
989        0,
990        MatConvert_Elemental_Dense,
991        0,
992        0,
993 /*74*/ 0,
994        0,
995        0,
996        0,
997        0,
998 /*79*/ 0,
999        0,
1000        0,
1001        0,
1002        0,
1003 /*84*/ 0,
1004        0,
1005        0,
1006        0,
1007        0,
1008 /*89*/ MatMatMult_Elemental,
1009        MatMatMultSymbolic_Elemental,
1010        MatMatMultNumeric_Elemental,
1011        0,
1012        0,
1013 /*94*/ 0,
1014        MatMatTransposeMult_Elemental,
1015        MatMatTransposeMultSymbolic_Elemental,
1016        MatMatTransposeMultNumeric_Elemental,
1017        0,
1018 /*99*/ 0,
1019        0,
1020        0,
1021        MatConjugate_Elemental,
1022        0,
1023 /*104*/0,
1024        0,
1025        0,
1026        0,
1027        0,
1028 /*109*/MatMatSolve_Elemental,
1029        0,
1030        0,
1031        0,
1032        0,
1033 /*114*/0,
1034        0,
1035        0,
1036        0,
1037        0,
1038 /*119*/0,
1039        MatHermitianTranspose_Elemental,
1040        0,
1041        0,
1042        0,
1043 /*124*/0,
1044        0,
1045        0,
1046        0,
1047        0,
1048 /*129*/0,
1049        0,
1050        0,
1051        0,
1052        0,
1053 /*134*/0,
1054        0,
1055        0,
1056        0,
1057        0
1058 };
1059 
1060 /*MC
1061    MATELEMENTAL = "elemental" - A matrix type for dense matrices using the Elemental package
1062 
1063    Options Database Keys:
1064 . -mat_type elemental - sets the matrix type to "elemental" during a call to MatSetFromOptions()
1065 . -mat_elemental_grid_height - sets Grid Height
1066 . -mat_elemental_grid_width - sets Grid Width
1067 
1068   Level: beginner
1069 
1070 .seealso: MATDENSE
1071 M*/
1072 
1073 #undef __FUNCT__
1074 #define __FUNCT__ "MatCreate_Elemental"
1075 PETSC_EXTERN_C PetscErrorCode MatCreate_Elemental(Mat A)
1076 {
1077   Mat_Elemental      *a;
1078   PetscErrorCode     ierr;
1079   PetscBool          flg,flg1,flg2;
1080   Mat_Elemental_Grid *commgrid;
1081   MPI_Comm           icomm;
1082   PetscInt           optv1,optv2;
1083 
1084   PetscFunctionBegin;
1085   ierr = PetscElementalInitializePackage(PETSC_NULL);CHKERRQ(ierr);
1086   ierr = PetscMemcpy(A->ops,&MatOps_Values,sizeof(struct _MatOps));CHKERRQ(ierr);
1087   A->insertmode = NOT_SET_VALUES;
1088 
1089   ierr = PetscNewLog(A,Mat_Elemental,&a);CHKERRQ(ierr);
1090   A->data = (void*)a;
1091 
1092   /* Set up the elemental matrix */
1093   elem::mpi::Comm cxxcomm(((PetscObject)A)->comm);
1094 
1095   /* Grid needs to be shared between multiple Mats on the same communicator, implement by attribute caching on the MPI_Comm */
1096   if (Petsc_Elemental_keyval == MPI_KEYVAL_INVALID) {
1097     ierr = MPI_Keyval_create(MPI_NULL_COPY_FN,MPI_NULL_DELETE_FN,&Petsc_Elemental_keyval,(void*)0);
1098   }
1099   ierr = PetscCommDuplicate(cxxcomm,&icomm,PETSC_NULL);CHKERRQ(ierr);
1100   ierr = MPI_Attr_get(icomm,Petsc_Elemental_keyval,(void**)&commgrid,(int*)&flg);CHKERRQ(ierr);
1101   if (!flg) {
1102     ierr = PetscNewLog(A,Mat_Elemental_Grid,&commgrid);CHKERRQ(ierr);
1103 
1104     ierr = PetscOptionsBegin(((PetscObject)A)->comm,((PetscObject)A)->prefix,"Elemental Options","Mat");CHKERRQ(ierr);
1105     /* displayed default grid sizes (CommSize,1) are set by us arbitrarily until elem::Grid() is called */
1106     ierr = PetscOptionsInt("-mat_elemental_grid_height","Grid Height","None",elem::mpi::CommSize(cxxcomm),&optv1,&flg1);CHKERRQ(ierr);
1107     ierr = PetscOptionsInt("-mat_elemental_grid_width","Grid Width","None",1,&optv2,&flg2);CHKERRQ(ierr);
1108     if (flg1 || flg2) {
1109       if (optv1*optv2 != elem::mpi::CommSize(cxxcomm)) {
1110         SETERRQ(((PetscObject)A)->comm,PETSC_ERR_ARG_INCOMP,"Grid Height times Grid Width must equal CommSize");
1111       }
1112       commgrid->grid = new elem::Grid(cxxcomm,optv1,optv2); /* use user-provided grid sizes */
1113     } else {
1114       commgrid->grid = new elem::Grid(cxxcomm); /* use Elemental default grid sizes */
1115     }
1116     commgrid->grid_refct = 1;
1117     ierr = MPI_Attr_put(icomm,Petsc_Elemental_keyval,(void*)commgrid);CHKERRQ(ierr);
1118     PetscOptionsEnd();
1119   } else {
1120     commgrid->grid_refct++;
1121   }
1122   ierr = PetscCommDestroy(&icomm);CHKERRQ(ierr);
1123   a->grid      = commgrid->grid;
1124   a->emat      = new elem::DistMatrix<PetscElemScalar>(*a->grid);
1125   a->esubmat   = new elem::Matrix<PetscElemScalar>(1,1);
1126   a->interface = new elem::AxpyInterface<PetscElemScalar>;
1127   a->pivot     = new elem::DistMatrix<PetscInt,elem::VC,elem::STAR>;
1128 
1129   /* build cache for off array entries formed */
1130   a->interface->Attach(elem::LOCAL_TO_GLOBAL,*(a->emat));
1131 
1132   ierr = PetscObjectComposeFunctionDynamic((PetscObject)A,"MatGetOwnershipIS_C","MatGetOwnershipIS_Elemental",MatGetOwnershipIS_Elemental);CHKERRQ(ierr);
1133   ierr = PetscObjectComposeFunctionDynamic((PetscObject)A,"MatGetFactor_elemental_C","MatGetFactor_elemental_elemental",MatGetFactor_elemental_elemental);CHKERRQ(ierr);
1134 
1135   ierr = PetscObjectChangeTypeName((PetscObject)A,MATELEMENTAL);CHKERRQ(ierr);
1136   PetscFunctionReturn(0);
1137 }
1138 
1139