xref: /petsc/src/mat/impls/elemental/matelem.cxx (revision 772ec989c7718bb40cfbe6762601ac78951cc001)
1 #include <../src/mat/impls/elemental/matelemimpl.h> /*I "petscmat.h" I*/
2 
3 /*
4     The variable Petsc_Elemental_keyval is used to indicate an MPI attribute that
5   is attached to a communicator, in this case the attribute is a Mat_Elemental_Grid
6 */
7 static PetscMPIInt Petsc_Elemental_keyval = MPI_KEYVAL_INVALID;
8 
9 #undef __FUNCT__
10 #define __FUNCT__ "PetscElementalInitializePackage"
11 /*@C
12    PetscElementalInitializePackage - Initialize Elemental package
13 
14    Logically Collective
15 
16    Level: developer
17 
18 .seealso: MATELEMENTAL, PetscElementalFinalizePackage()
19 @*/
20 PetscErrorCode PetscElementalInitializePackage(void)
21 {
22   PetscErrorCode ierr;
23 
24   PetscFunctionBegin;
25   if (elem::Initialized()) PetscFunctionReturn(0);
26   { /* We have already initialized MPI, so this song and dance is just to pass these variables (which won't be used by Elemental) through the interface that needs references */
27     int zero = 0;
28     char **nothing = 0;
29     elem::Initialize(zero,nothing);
30   }
31   ierr = PetscRegisterFinalize(PetscElementalFinalizePackage);CHKERRQ(ierr);
32   PetscFunctionReturn(0);
33 }
34 
35 #undef __FUNCT__
36 #define __FUNCT__ "PetscElementalFinalizePackage"
37 /*@C
38    PetscElementalFinalizePackage - Finalize Elemental package
39 
40    Logically Collective
41 
42    Level: developer
43 
44 .seealso: MATELEMENTAL, PetscElementalInitializePackage()
45 @*/
46 PetscErrorCode PetscElementalFinalizePackage(void)
47 {
48 
49   PetscFunctionBegin;
50   elem::Finalize();
51   PetscFunctionReturn(0);
52 }
53 
54 #undef __FUNCT__
55 #define __FUNCT__ "MatView_Elemental"
56 static PetscErrorCode MatView_Elemental(Mat A,PetscViewer viewer)
57 {
58   PetscErrorCode ierr;
59   Mat_Elemental  *a = (Mat_Elemental*)A->data;
60   PetscBool      iascii;
61 
62   PetscFunctionBegin;
63   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
64   if (iascii) {
65     PetscViewerFormat format;
66     ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr);
67     if (format == PETSC_VIEWER_ASCII_INFO) {
68       /* call elemental viewing function */
69       ierr = PetscViewerASCIIPrintf(viewer,"Elemental run parameters:\n");CHKERRQ(ierr);
70       ierr = PetscViewerASCIIPrintf(viewer,"  allocated entries=%d\n",(*a->emat).AllocatedMemory());CHKERRQ(ierr);
71       ierr = PetscViewerASCIIPrintf(viewer,"  grid height=%d, grid width=%d\n",(*a->emat).Grid().Height(),(*a->emat).Grid().Width());CHKERRQ(ierr);
72       if (format == PETSC_VIEWER_ASCII_FACTOR_INFO) {
73         /* call elemental viewing function */
74         ierr = PetscPrintf(PetscObjectComm((PetscObject)viewer),"test matview_elemental 2\n");CHKERRQ(ierr);
75       }
76 
77     } else if (format == PETSC_VIEWER_DEFAULT) {
78       ierr = PetscViewerASCIIUseTabs(viewer,PETSC_FALSE);CHKERRQ(ierr);
79       elem::Print( *a->emat, "Elemental matrix (cyclic ordering)" );
80       ierr = PetscViewerASCIIUseTabs(viewer,PETSC_TRUE);CHKERRQ(ierr);
81       if (A->factortype == MAT_FACTOR_NONE){
82         Mat Adense;
83         ierr = PetscPrintf(PetscObjectComm((PetscObject)viewer),"Elemental matrix (explicit ordering)\n");CHKERRQ(ierr);
84         ierr = MatConvert(A,MATDENSE,MAT_INITIAL_MATRIX,&Adense);CHKERRQ(ierr);
85         ierr = MatView(Adense,viewer);CHKERRQ(ierr);
86         ierr = MatDestroy(&Adense);CHKERRQ(ierr);
87       }
88     } else SETERRQ(PetscObjectComm((PetscObject)viewer),PETSC_ERR_SUP,"Format");
89   } else {
90     /* convert to dense format and call MatView() */
91     Mat Adense;
92     ierr = PetscPrintf(PetscObjectComm((PetscObject)viewer),"Elemental matrix (explicit ordering)\n");CHKERRQ(ierr);
93     ierr = MatConvert(A,MATDENSE,MAT_INITIAL_MATRIX,&Adense);CHKERRQ(ierr);
94     ierr = MatView(Adense,viewer);CHKERRQ(ierr);
95     ierr = MatDestroy(&Adense);CHKERRQ(ierr);
96   }
97   PetscFunctionReturn(0);
98 }
99 
100 #undef __FUNCT__
101 #define __FUNCT__ "MatGetInfo_Elemental"
102 static PetscErrorCode MatGetInfo_Elemental(Mat A,MatInfoType flag,MatInfo *info)
103 {
104   Mat_Elemental  *a = (Mat_Elemental*)A->data;
105   PetscMPIInt    rank;
106 
107   PetscFunctionBegin;
108   MPI_Comm_rank(PetscObjectComm((PetscObject)A),&rank);
109 
110   /* if (!rank) printf("          .........MatGetInfo_Elemental ...\n"); */
111   info->block_size     = 1.0;
112 
113   if (flag == MAT_LOCAL) {
114     info->nz_allocated   = (double)(*a->emat).AllocatedMemory(); /* locally allocated */
115     info->nz_used        = info->nz_allocated;
116   } else if (flag == MAT_GLOBAL_MAX) {
117     //ierr = MPI_Allreduce(isend,irecv,5,MPIU_REAL,MPIU_MAX,PetscObjectComm((PetscObject)matin));CHKERRQ(ierr);
118     /* see MatGetInfo_MPIAIJ() for getting global info->nz_allocated! */
119     //SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP," MAT_GLOBAL_MAX not written yet");
120   } else if (flag == MAT_GLOBAL_SUM) {
121     //SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP," MAT_GLOBAL_SUM not written yet");
122     info->nz_allocated   = (double)(*a->emat).AllocatedMemory(); /* locally allocated */
123     info->nz_used        = info->nz_allocated; /* assume Elemental does accurate allocation */
124     //ierr = MPI_Allreduce(isend,irecv,1,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
125     //PetscPrintf(PETSC_COMM_SELF,"    ... [%d] locally allocated %g\n",rank,info->nz_allocated);
126   }
127 
128   info->nz_unneeded       = 0.0;
129   info->assemblies        = (double)A->num_ass;
130   info->mallocs           = 0;
131   info->memory            = ((PetscObject)A)->mem;
132   info->fill_ratio_given  = 0; /* determined by Elemental */
133   info->fill_ratio_needed = 0;
134   info->factor_mallocs    = 0;
135   PetscFunctionReturn(0);
136 }
137 
138 #undef __FUNCT__
139 #define __FUNCT__ "MatSetValues_Elemental"
140 static PetscErrorCode MatSetValues_Elemental(Mat A,PetscInt nr,const PetscInt *rows,PetscInt nc,const PetscInt *cols,const PetscScalar *vals,InsertMode imode)
141 {
142   PetscErrorCode ierr;
143   Mat_Elemental  *a = (Mat_Elemental*)A->data;
144   PetscMPIInt    rank;
145   PetscInt       i,j,rrank,ridx,crank,cidx;
146 
147   PetscFunctionBegin;
148   ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)A),&rank);CHKERRQ(ierr);
149 
150   const elem::Grid &grid = a->emat->Grid();
151   for (i=0; i<nr; i++) {
152     PetscInt erow,ecol,elrow,elcol;
153     if (rows[i] < 0) continue;
154     P2RO(A,0,rows[i],&rrank,&ridx);
155     RO2E(A,0,rrank,ridx,&erow);
156     if (rrank < 0 || ridx < 0 || erow < 0) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Incorrect row translation");
157     for (j=0; j<nc; j++) {
158       if (cols[j] < 0) continue;
159       P2RO(A,1,cols[j],&crank,&cidx);
160       RO2E(A,1,crank,cidx,&ecol);
161       if (crank < 0 || cidx < 0 || ecol < 0) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Incorrect col translation");
162       if (erow % grid.MCSize() != grid.MCRank() || ecol % grid.MRSize() != grid.MRRank()){ /* off-proc entry */
163         if (imode != ADD_VALUES) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Only ADD_VALUES to off-processor entry is supported");
164         /* PetscPrintf(PETSC_COMM_SELF,"[%D] add off-proc entry (%D,%D, %g) (%D %D)\n",rank,rows[i],cols[j],*(vals+i*nc),erow,ecol); */
165         a->esubmat->Set(0,0, (PetscElemScalar)vals[i*nc+j]);
166         a->interface->Axpy(1.0,*(a->esubmat),erow,ecol);
167         continue;
168       }
169       elrow = erow / grid.MCSize();
170       elcol = ecol / grid.MRSize();
171       switch (imode) {
172       case INSERT_VALUES: a->emat->SetLocal(elrow,elcol,(PetscElemScalar)vals[i*nc+j]); break;
173       case ADD_VALUES: a->emat->UpdateLocal(elrow,elcol,(PetscElemScalar)vals[i*nc+j]); break;
174       default: SETERRQ1(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for InsertMode %d",(int)imode);
175       }
176     }
177   }
178   PetscFunctionReturn(0);
179 }
180 
181 #undef __FUNCT__
182 #define __FUNCT__ "MatMult_Elemental"
183 static PetscErrorCode MatMult_Elemental(Mat A,Vec X,Vec Y)
184 {
185   Mat_Elemental         *a = (Mat_Elemental*)A->data;
186   PetscErrorCode        ierr;
187   const PetscElemScalar *x;
188   PetscElemScalar       *y;
189   PetscElemScalar       one = 1,zero = 0;
190 
191   PetscFunctionBegin;
192   ierr = VecGetArrayRead(X,(const PetscScalar **)&x);CHKERRQ(ierr);
193   ierr = VecGetArray(Y,(PetscScalar **)&y);CHKERRQ(ierr);
194   { /* Scoping so that constructor is called before pointer is returned */
195     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> xe(A->cmap->N,1,0,0,x,A->cmap->n,*a->grid);
196     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> ye(A->rmap->N,1,0,0,y,A->rmap->n,*a->grid);
197     elem::Gemv(elem::NORMAL,one,*a->emat,xe,zero,ye);
198   }
199   ierr = VecRestoreArrayRead(X,(const PetscScalar **)&x);CHKERRQ(ierr);
200   ierr = VecRestoreArray(Y,(PetscScalar **)&y);CHKERRQ(ierr);
201   PetscFunctionReturn(0);
202 }
203 
204 #undef __FUNCT__
205 #define __FUNCT__ "MatMultTranspose_Elemental"
206 static PetscErrorCode MatMultTranspose_Elemental(Mat A,Vec X,Vec Y)
207 {
208   Mat_Elemental         *a = (Mat_Elemental*)A->data;
209   PetscErrorCode        ierr;
210   const PetscElemScalar *x;
211   PetscElemScalar       *y;
212   PetscElemScalar       one = 1,zero = 0;
213 
214   PetscFunctionBegin;
215   ierr = VecGetArrayRead(X,(const PetscScalar **)&x);CHKERRQ(ierr);
216   ierr = VecGetArray(Y,(PetscScalar **)&y);CHKERRQ(ierr);
217   { /* Scoping so that constructor is called before pointer is returned */
218     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> xe(A->rmap->N,1,0,0,x,A->rmap->n,*a->grid);
219     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> ye(A->cmap->N,1,0,0,y,A->cmap->n,*a->grid);
220     elem::Gemv(elem::TRANSPOSE,one,*a->emat,xe,zero,ye);
221   }
222   ierr = VecRestoreArrayRead(X,(const PetscScalar **)&x);CHKERRQ(ierr);
223   ierr = VecRestoreArray(Y,(PetscScalar **)&y);CHKERRQ(ierr);
224   PetscFunctionReturn(0);
225 }
226 
227 #undef __FUNCT__
228 #define __FUNCT__ "MatMultAdd_Elemental"
229 static PetscErrorCode MatMultAdd_Elemental(Mat A,Vec X,Vec Y,Vec Z)
230 {
231   Mat_Elemental         *a = (Mat_Elemental*)A->data;
232   PetscErrorCode        ierr;
233   const PetscElemScalar *x;
234   PetscElemScalar       *z;
235   PetscElemScalar       one = 1;
236 
237   PetscFunctionBegin;
238   if (Y != Z) {ierr = VecCopy(Y,Z);CHKERRQ(ierr);}
239   ierr = VecGetArrayRead(X,(const PetscScalar **)&x);CHKERRQ(ierr);
240   ierr = VecGetArray(Z,(PetscScalar **)&z);CHKERRQ(ierr);
241   { /* Scoping so that constructor is called before pointer is returned */
242     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> xe(A->cmap->N,1,0,0,x,A->cmap->n,*a->grid);
243     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> ze(A->rmap->N,1,0,0,z,A->rmap->n,*a->grid);
244     elem::Gemv(elem::NORMAL,one,*a->emat,xe,one,ze);
245   }
246   ierr = VecRestoreArrayRead(X,(const PetscScalar **)&x);CHKERRQ(ierr);
247   ierr = VecRestoreArray(Z,(PetscScalar **)&z);CHKERRQ(ierr);
248   PetscFunctionReturn(0);
249 }
250 
251 #undef __FUNCT__
252 #define __FUNCT__ "MatMultTransposeAdd_Elemental"
253 static PetscErrorCode MatMultTransposeAdd_Elemental(Mat A,Vec X,Vec Y,Vec Z)
254 {
255   Mat_Elemental         *a = (Mat_Elemental*)A->data;
256   PetscErrorCode        ierr;
257   const PetscElemScalar *x;
258   PetscElemScalar       *z;
259   PetscElemScalar       one = 1;
260 
261   PetscFunctionBegin;
262   if (Y != Z) {ierr = VecCopy(Y,Z);CHKERRQ(ierr);}
263   ierr = VecGetArrayRead(X,(const PetscScalar **)&x);CHKERRQ(ierr);
264   ierr = VecGetArray(Z,(PetscScalar **)&z);CHKERRQ(ierr);
265   { /* Scoping so that constructor is called before pointer is returned */
266     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> xe(A->rmap->N,1,0,0,x,A->rmap->n,*a->grid);
267     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> ze(A->cmap->N,1,0,0,z,A->cmap->n,*a->grid);
268     elem::Gemv(elem::TRANSPOSE,one,*a->emat,xe,one,ze);
269   }
270   ierr = VecRestoreArrayRead(X,(const PetscScalar **)&x);CHKERRQ(ierr);
271   ierr = VecRestoreArray(Z,(PetscScalar **)&z);CHKERRQ(ierr);
272   PetscFunctionReturn(0);
273 }
274 
275 #undef __FUNCT__
276 #define __FUNCT__ "MatMatMultNumeric_Elemental"
277 static PetscErrorCode MatMatMultNumeric_Elemental(Mat A,Mat B,Mat C)
278 {
279   Mat_Elemental    *a = (Mat_Elemental*)A->data;
280   Mat_Elemental    *b = (Mat_Elemental*)B->data;
281   Mat_Elemental    *c = (Mat_Elemental*)C->data;
282   PetscElemScalar  one = 1,zero = 0;
283 
284   PetscFunctionBegin;
285   { /* Scoping so that constructor is called before pointer is returned */
286     elem::Gemm(elem::NORMAL,elem::NORMAL,one,*a->emat,*b->emat,zero,*c->emat);
287   }
288   C->assembled = PETSC_TRUE;
289   PetscFunctionReturn(0);
290 }
291 
292 #undef __FUNCT__
293 #define __FUNCT__ "MatMatMultSymbolic_Elemental"
294 static PetscErrorCode MatMatMultSymbolic_Elemental(Mat A,Mat B,PetscReal fill,Mat *C)
295 {
296   PetscErrorCode ierr;
297   Mat            Ce;
298   MPI_Comm       comm;
299 
300   PetscFunctionBegin;
301   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
302   ierr = MatCreate(comm,&Ce);CHKERRQ(ierr);
303   ierr = MatSetSizes(Ce,A->rmap->n,B->cmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
304   ierr = MatSetType(Ce,MATELEMENTAL);CHKERRQ(ierr);
305   ierr = MatSetUp(Ce);CHKERRQ(ierr);
306   *C = Ce;
307   PetscFunctionReturn(0);
308 }
309 
310 #undef __FUNCT__
311 #define __FUNCT__ "MatMatMult_Elemental"
312 static PetscErrorCode MatMatMult_Elemental(Mat A,Mat B,MatReuse scall,PetscReal fill,Mat *C)
313 {
314   PetscErrorCode ierr;
315 
316   PetscFunctionBegin;
317   if (scall == MAT_INITIAL_MATRIX){
318     ierr = PetscLogEventBegin(MAT_MatMultSymbolic,A,B,0,0);CHKERRQ(ierr);
319     ierr = MatMatMultSymbolic_Elemental(A,B,1.0,C);CHKERRQ(ierr);
320     ierr = PetscLogEventEnd(MAT_MatMultSymbolic,A,B,0,0);CHKERRQ(ierr);
321   }
322   ierr = PetscLogEventBegin(MAT_MatMultNumeric,A,B,0,0);CHKERRQ(ierr);
323   ierr = MatMatMultNumeric_Elemental(A,B,*C);CHKERRQ(ierr);
324   ierr = PetscLogEventEnd(MAT_MatMultNumeric,A,B,0,0);CHKERRQ(ierr);
325   PetscFunctionReturn(0);
326 }
327 
328 #undef __FUNCT__
329 #define __FUNCT__ "MatMatTransposeMultNumeric_Elemental"
330 static PetscErrorCode MatMatTransposeMultNumeric_Elemental(Mat A,Mat B,Mat C)
331 {
332   Mat_Elemental      *a = (Mat_Elemental*)A->data;
333   Mat_Elemental      *b = (Mat_Elemental*)B->data;
334   Mat_Elemental      *c = (Mat_Elemental*)C->data;
335   PetscElemScalar    one = 1,zero = 0;
336 
337   PetscFunctionBegin;
338   { /* Scoping so that constructor is called before pointer is returned */
339     elem::Gemm(elem::NORMAL,elem::TRANSPOSE,one,*a->emat,*b->emat,zero,*c->emat);
340   }
341   C->assembled = PETSC_TRUE;
342   PetscFunctionReturn(0);
343 }
344 
345 #undef __FUNCT__
346 #define __FUNCT__ "MatMatTransposeMultSymbolic_Elemental"
347 static PetscErrorCode MatMatTransposeMultSymbolic_Elemental(Mat A,Mat B,PetscReal fill,Mat *C)
348 {
349   PetscErrorCode ierr;
350   Mat            Ce;
351   MPI_Comm       comm;
352 
353   PetscFunctionBegin;
354   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
355   ierr = MatCreate(comm,&Ce);CHKERRQ(ierr);
356   ierr = MatSetSizes(Ce,A->rmap->n,B->rmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
357   ierr = MatSetType(Ce,MATELEMENTAL);CHKERRQ(ierr);
358   ierr = MatSetUp(Ce);CHKERRQ(ierr);
359   *C = Ce;
360   PetscFunctionReturn(0);
361 }
362 
363 #undef __FUNCT__
364 #define __FUNCT__ "MatMatTransposeMult_Elemental"
365 static PetscErrorCode MatMatTransposeMult_Elemental(Mat A,Mat B,MatReuse scall,PetscReal fill,Mat *C)
366 {
367   PetscErrorCode ierr;
368 
369   PetscFunctionBegin;
370   if (scall == MAT_INITIAL_MATRIX){
371     ierr = PetscLogEventBegin(MAT_MatTransposeMultSymbolic,A,B,0,0);CHKERRQ(ierr);
372     ierr = MatMatMultSymbolic_Elemental(A,B,1.0,C);CHKERRQ(ierr);
373     ierr = PetscLogEventEnd(MAT_MatTransposeMultSymbolic,A,B,0,0);CHKERRQ(ierr);
374   }
375   ierr = PetscLogEventBegin(MAT_MatTransposeMultNumeric,A,B,0,0);CHKERRQ(ierr);
376   ierr = MatMatTransposeMultNumeric_Elemental(A,B,*C);CHKERRQ(ierr);
377   ierr = PetscLogEventEnd(MAT_MatTransposeMultNumeric,A,B,0,0);CHKERRQ(ierr);
378   PetscFunctionReturn(0);
379 }
380 
381 #undef __FUNCT__
382 #define __FUNCT__ "MatGetDiagonal_Elemental"
383 static PetscErrorCode MatGetDiagonal_Elemental(Mat A,Vec D)
384 {
385   PetscInt        i,nrows,ncols,nD,rrank,ridx,crank,cidx;
386   Mat_Elemental   *a = (Mat_Elemental*)A->data;
387   PetscErrorCode  ierr;
388   PetscElemScalar v;
389   MPI_Comm        comm;
390 
391   PetscFunctionBegin;
392   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
393   ierr = MatGetSize(A,&nrows,&ncols);CHKERRQ(ierr);
394   nD = nrows>ncols ? ncols : nrows;
395   for (i=0; i<nD; i++) {
396     PetscInt erow,ecol;
397     P2RO(A,0,i,&rrank,&ridx);
398     RO2E(A,0,rrank,ridx,&erow);
399     if (rrank < 0 || ridx < 0 || erow < 0) SETERRQ(comm,PETSC_ERR_PLIB,"Incorrect row translation");
400     P2RO(A,1,i,&crank,&cidx);
401     RO2E(A,1,crank,cidx,&ecol);
402     if (crank < 0 || cidx < 0 || ecol < 0) SETERRQ(comm,PETSC_ERR_PLIB,"Incorrect col translation");
403     v = a->emat->Get(erow,ecol);
404     ierr = VecSetValues(D,1,&i,(PetscScalar*)&v,INSERT_VALUES);CHKERRQ(ierr);
405   }
406   ierr = VecAssemblyBegin(D);CHKERRQ(ierr);
407   ierr = VecAssemblyEnd(D);CHKERRQ(ierr);
408   PetscFunctionReturn(0);
409 }
410 
411 #undef __FUNCT__
412 #define __FUNCT__ "MatDiagonalScale_Elemental"
413 static PetscErrorCode MatDiagonalScale_Elemental(Mat X,Vec L,Vec R)
414 {
415   Mat_Elemental         *x = (Mat_Elemental*)X->data;
416   const PetscElemScalar *d;
417   PetscErrorCode        ierr;
418 
419   PetscFunctionBegin;
420   if (R) {
421     ierr = VecGetArrayRead(R,(const PetscScalar **)&d);CHKERRQ(ierr);
422     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> de(X->cmap->N,1,0,0,d,X->cmap->n,*x->grid);
423     elem::DiagonalScale(elem::RIGHT,elem::NORMAL,de,*x->emat);
424     ierr = VecRestoreArrayRead(R,(const PetscScalar **)&d);CHKERRQ(ierr);
425   }
426   if (L) {
427     ierr = VecGetArrayRead(L,(const PetscScalar **)&d);CHKERRQ(ierr);
428     elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> de(X->rmap->N,1,0,0,d,X->rmap->n,*x->grid);
429     elem::DiagonalScale(elem::LEFT,elem::NORMAL,de,*x->emat);
430     ierr = VecRestoreArrayRead(L,(const PetscScalar **)&d);CHKERRQ(ierr);
431   }
432   PetscFunctionReturn(0);
433 }
434 
435 #undef __FUNCT__
436 #define __FUNCT__ "MatScale_Elemental"
437 static PetscErrorCode MatScale_Elemental(Mat X,PetscScalar a)
438 {
439   Mat_Elemental  *x = (Mat_Elemental*)X->data;
440 
441   PetscFunctionBegin;
442   elem::Scal((PetscElemScalar)a,*x->emat);
443   PetscFunctionReturn(0);
444 }
445 
446 #undef __FUNCT__
447 #define __FUNCT__ "MatAXPY_Elemental"
448 static PetscErrorCode MatAXPY_Elemental(Mat Y,PetscScalar a,Mat X,MatStructure str)
449 {
450   Mat_Elemental  *x = (Mat_Elemental*)X->data;
451   Mat_Elemental  *y = (Mat_Elemental*)Y->data;
452 
453   PetscFunctionBegin;
454   elem::Axpy((PetscElemScalar)a,*x->emat,*y->emat);
455   PetscFunctionReturn(0);
456 }
457 
458 #undef __FUNCT__
459 #define __FUNCT__ "MatCopy_Elemental"
460 static PetscErrorCode MatCopy_Elemental(Mat A,Mat B,MatStructure str)
461 {
462   Mat_Elemental *a=(Mat_Elemental*)A->data;
463   Mat_Elemental *b=(Mat_Elemental*)B->data;
464 
465   PetscFunctionBegin;
466   elem::Copy(*a->emat,*b->emat);
467   PetscFunctionReturn(0);
468 }
469 
470 #undef __FUNCT__
471 #define __FUNCT__ "MatDuplicate_Elemental"
472 static PetscErrorCode MatDuplicate_Elemental(Mat A,MatDuplicateOption op,Mat *B)
473 {
474   Mat            Be;
475   MPI_Comm       comm;
476   Mat_Elemental  *a=(Mat_Elemental*)A->data;
477   PetscErrorCode ierr;
478 
479   PetscFunctionBegin;
480   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
481   ierr = MatCreate(comm,&Be);CHKERRQ(ierr);
482   ierr = MatSetSizes(Be,A->rmap->n,A->cmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
483   ierr = MatSetType(Be,MATELEMENTAL);CHKERRQ(ierr);
484   ierr = MatSetUp(Be);CHKERRQ(ierr);
485   *B = Be;
486   if (op == MAT_COPY_VALUES) {
487     Mat_Elemental *b=(Mat_Elemental*)Be->data;
488     elem::Copy(*a->emat,*b->emat);
489   }
490   Be->assembled = PETSC_TRUE;
491   PetscFunctionReturn(0);
492 }
493 
494 #undef __FUNCT__
495 #define __FUNCT__ "MatTranspose_Elemental"
496 static PetscErrorCode MatTranspose_Elemental(Mat A,MatReuse reuse,Mat *B)
497 {
498   Mat            Be;
499   PetscErrorCode ierr;
500   MPI_Comm       comm;
501   Mat_Elemental  *a = (Mat_Elemental*)A->data, *b;
502 
503   PetscFunctionBegin;
504   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
505   /* Only out-of-place supported */
506   if (reuse == MAT_INITIAL_MATRIX){
507     ierr = MatCreate(comm,&Be);CHKERRQ(ierr);
508     ierr = MatSetSizes(Be,A->cmap->n,A->rmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
509     ierr = MatSetType(Be,MATELEMENTAL);CHKERRQ(ierr);
510     ierr = MatSetUp(Be);CHKERRQ(ierr);
511     *B = Be;
512   }
513   b = (Mat_Elemental*)Be->data;
514   elem::Transpose(*a->emat,*b->emat);
515   Be->assembled = PETSC_TRUE;
516   PetscFunctionReturn(0);
517 }
518 
519 #undef __FUNCT__
520 #define __FUNCT__ "MatConjugate_Elemental"
521 static PetscErrorCode MatConjugate_Elemental(Mat A)
522 {
523   Mat_Elemental  *a = (Mat_Elemental*)A->data;
524 
525   PetscFunctionBegin;
526   elem::Conjugate(*a->emat);
527   PetscFunctionReturn(0);
528 }
529 
530 #undef __FUNCT__
531 #define __FUNCT__ "MatHermitianTranspose_Elemental"
532 static PetscErrorCode MatHermitianTranspose_Elemental(Mat A,MatReuse reuse,Mat *B)
533 {
534   Mat            Be;
535   PetscErrorCode ierr;
536   MPI_Comm       comm;
537   Mat_Elemental  *a = (Mat_Elemental*)A->data, *b;
538 
539   PetscFunctionBegin;
540   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
541   /* Only out-of-place supported */
542   if (reuse == MAT_INITIAL_MATRIX){
543     ierr = MatCreate(comm,&Be);CHKERRQ(ierr);
544     ierr = MatSetSizes(Be,A->cmap->n,A->rmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
545     ierr = MatSetType(Be,MATELEMENTAL);CHKERRQ(ierr);
546     ierr = MatSetUp(Be);CHKERRQ(ierr);
547     *B = Be;
548   }
549   b = (Mat_Elemental*)Be->data;
550   elem::Adjoint(*a->emat,*b->emat);
551   Be->assembled = PETSC_TRUE;
552   PetscFunctionReturn(0);
553 }
554 
555 #undef __FUNCT__
556 #define __FUNCT__ "MatSolve_Elemental"
557 static PetscErrorCode MatSolve_Elemental(Mat A,Vec B,Vec X)
558 {
559   Mat_Elemental     *a = (Mat_Elemental*)A->data;
560   PetscErrorCode    ierr;
561   PetscElemScalar   *x;
562 
563   PetscFunctionBegin;
564   ierr = VecCopy(B,X);CHKERRQ(ierr);
565   ierr = VecGetArray(X,(PetscScalar **)&x);CHKERRQ(ierr);
566   elem::DistMatrix<PetscElemScalar,elem::VC,elem::STAR> xe(A->rmap->N,1,0,0,x,A->rmap->n,*a->grid);
567   elem::DistMatrix<PetscElemScalar,elem::MC,elem::MR> xer = xe;
568   switch (A->factortype) {
569   case MAT_FACTOR_LU:
570     if ((*a->pivot).AllocatedMemory()) {
571       elem::lu::SolveAfter(elem::NORMAL,*a->emat,*a->pivot,xer);
572       elem::Copy(xer,xe);
573     } else {
574       elem::lu::SolveAfter(elem::NORMAL,*a->emat,xer);
575       elem::Copy(xer,xe);
576     }
577     break;
578   case MAT_FACTOR_CHOLESKY:
579     elem::cholesky::SolveAfter(elem::UPPER,elem::NORMAL,*a->emat,xer);
580     elem::Copy(xer,xe);
581     break;
582   default:
583     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Unfactored Matrix or Unsupported MatFactorType");
584     break;
585   }
586   ierr = VecRestoreArray(X,(PetscScalar **)&x);CHKERRQ(ierr);
587   PetscFunctionReturn(0);
588 }
589 
590 #undef __FUNCT__
591 #define __FUNCT__ "MatSolveAdd_Elemental"
592 static PetscErrorCode MatSolveAdd_Elemental(Mat A,Vec B,Vec Y,Vec X)
593 {
594   PetscErrorCode    ierr;
595 
596   PetscFunctionBegin;
597   ierr = MatSolve_Elemental(A,B,X);CHKERRQ(ierr);
598   ierr = VecAXPY(X,1,Y);CHKERRQ(ierr);
599   PetscFunctionReturn(0);
600 }
601 
602 #undef __FUNCT__
603 #define __FUNCT__ "MatMatSolve_Elemental"
604 static PetscErrorCode MatMatSolve_Elemental(Mat A,Mat B,Mat X)
605 {
606   Mat_Elemental *a=(Mat_Elemental*)A->data;
607   Mat_Elemental *b=(Mat_Elemental*)B->data;
608   Mat_Elemental *x=(Mat_Elemental*)X->data;
609 
610   PetscFunctionBegin;
611   elem::Copy(*b->emat,*x->emat);
612   switch (A->factortype) {
613   case MAT_FACTOR_LU:
614     if ((*a->pivot).AllocatedMemory()) {
615       elem::lu::SolveAfter(elem::NORMAL,*a->emat,*a->pivot,*x->emat);
616     } else {
617       elem::lu::SolveAfter(elem::NORMAL,*a->emat,*x->emat);
618     }
619     break;
620   case MAT_FACTOR_CHOLESKY:
621     elem::cholesky::SolveAfter(elem::UPPER,elem::NORMAL,*a->emat,*x->emat);
622     break;
623   default:
624     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Unfactored Matrix or Unsupported MatFactorType");
625     break;
626   }
627   PetscFunctionReturn(0);
628 }
629 
630 #undef __FUNCT__
631 #define __FUNCT__ "MatLUFactor_Elemental"
632 static PetscErrorCode MatLUFactor_Elemental(Mat A,IS row,IS col,const MatFactorInfo *info)
633 {
634   Mat_Elemental  *a = (Mat_Elemental*)A->data;
635 
636   PetscFunctionBegin;
637   if (info->dtcol){
638     elem::LU(*a->emat,*a->pivot);
639   } else {
640     elem::LU(*a->emat);
641   }
642   A->factortype = MAT_FACTOR_LU;
643   A->assembled  = PETSC_TRUE;
644   PetscFunctionReturn(0);
645 }
646 
647 #undef __FUNCT__
648 #define __FUNCT__ "MatLUFactorNumeric_Elemental"
649 static PetscErrorCode  MatLUFactorNumeric_Elemental(Mat F,Mat A,const MatFactorInfo *info)
650 {
651   PetscErrorCode ierr;
652 
653   PetscFunctionBegin;
654   ierr = MatCopy(A,F,SAME_NONZERO_PATTERN);CHKERRQ(ierr);
655   ierr = MatLUFactor_Elemental(F,0,0,info);CHKERRQ(ierr);
656   PetscFunctionReturn(0);
657 }
658 
659 #undef __FUNCT__
660 #define __FUNCT__ "MatLUFactorSymbolic_Elemental"
661 static PetscErrorCode  MatLUFactorSymbolic_Elemental(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info)
662 {
663   PetscFunctionBegin;
664   /* F is create and allocated by MatGetFactor_elemental_petsc(), skip this routine. */
665   PetscFunctionReturn(0);
666 }
667 
668 #undef __FUNCT__
669 #define __FUNCT__ "MatCholeskyFactor_Elemental"
670 static PetscErrorCode MatCholeskyFactor_Elemental(Mat A,IS perm,const MatFactorInfo *info)
671 {
672   Mat_Elemental  *a = (Mat_Elemental*)A->data;
673   elem::DistMatrix<PetscElemScalar,elem::MC,elem::STAR> d;
674 
675   PetscFunctionBegin;
676   elem::Cholesky(elem::UPPER,*a->emat);
677   A->factortype = MAT_FACTOR_CHOLESKY;
678   A->assembled  = PETSC_TRUE;
679   PetscFunctionReturn(0);
680 }
681 
682 #undef __FUNCT__
683 #define __FUNCT__ "MatCholeskyFactorNumeric_Elemental"
684 static PetscErrorCode MatCholeskyFactorNumeric_Elemental(Mat F,Mat A,const MatFactorInfo *info)
685 {
686   PetscErrorCode ierr;
687 
688   PetscFunctionBegin;
689   ierr = MatCopy(A,F,SAME_NONZERO_PATTERN);CHKERRQ(ierr);
690   ierr = MatCholeskyFactor_Elemental(F,0,info);CHKERRQ(ierr);
691   PetscFunctionReturn(0);
692 }
693 
694 #undef __FUNCT__
695 #define __FUNCT__ "MatCholeskyFactorSymbolic_Elemental"
696 static PetscErrorCode MatCholeskyFactorSymbolic_Elemental(Mat F,Mat A,IS perm,const MatFactorInfo *info)
697 {
698   PetscFunctionBegin;
699   /* F is create and allocated by MatGetFactor_elemental_petsc(), skip this routine. */
700   PetscFunctionReturn(0);
701 }
702 
703 #undef __FUNCT__
704 #define __FUNCT__ "MatFactorGetSolverPackage_elemental_elemental"
705 PetscErrorCode MatFactorGetSolverPackage_elemental_elemental(Mat A,const MatSolverPackage *type)
706 {
707   PetscFunctionBegin;
708   *type = MATSOLVERELEMENTAL;
709   PetscFunctionReturn(0);
710 }
711 
712 #undef __FUNCT__
713 #define __FUNCT__ "MatGetFactor_elemental_elemental"
714 static PetscErrorCode MatGetFactor_elemental_elemental(Mat A,MatFactorType ftype,Mat *F)
715 {
716   Mat            B;
717   PetscErrorCode ierr;
718 
719   PetscFunctionBegin;
720   /* Create the factorization matrix */
721   ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr);
722   ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
723   ierr = MatSetType(B,MATELEMENTAL);CHKERRQ(ierr);
724   ierr = MatSetUp(B);CHKERRQ(ierr);
725   B->factortype = ftype;
726   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverPackage_C",MatFactorGetSolverPackage_elemental_elemental);CHKERRQ(ierr);
727   *F            = B;
728   PetscFunctionReturn(0);
729 }
730 
731 #undef __FUNCT__
732 #define __FUNCT__ "MatNorm_Elemental"
733 static PetscErrorCode MatNorm_Elemental(Mat A,NormType type,PetscReal *nrm)
734 {
735   Mat_Elemental *a=(Mat_Elemental*)A->data;
736 
737   PetscFunctionBegin;
738   switch (type){
739   case NORM_1:
740     *nrm = elem::OneNorm(*a->emat);
741     break;
742   case NORM_FROBENIUS:
743     *nrm = elem::FrobeniusNorm(*a->emat);
744     break;
745   case NORM_INFINITY:
746     *nrm = elem::InfinityNorm(*a->emat);
747     break;
748   default:
749     printf("Error: unsupported norm type!\n");
750   }
751   PetscFunctionReturn(0);
752 }
753 
754 #undef __FUNCT__
755 #define __FUNCT__ "MatZeroEntries_Elemental"
756 static PetscErrorCode MatZeroEntries_Elemental(Mat A)
757 {
758   Mat_Elemental *a=(Mat_Elemental*)A->data;
759 
760   PetscFunctionBegin;
761   elem::Zero(*a->emat);
762   PetscFunctionReturn(0);
763 }
764 
765 #undef __FUNCT__
766 #define __FUNCT__ "MatGetOwnershipIS_Elemental"
767 static PetscErrorCode MatGetOwnershipIS_Elemental(Mat A,IS *rows,IS *cols)
768 {
769   Mat_Elemental  *a = (Mat_Elemental*)A->data;
770   PetscErrorCode ierr;
771   PetscInt       i,m,shift,stride,*idx;
772 
773   PetscFunctionBegin;
774   if (rows) {
775     m = a->emat->LocalHeight();
776     shift = a->emat->ColShift();
777     stride = a->emat->ColStride();
778     ierr = PetscMalloc1(m,&idx);CHKERRQ(ierr);
779     for (i=0; i<m; i++) {
780       PetscInt rank,offset;
781       E2RO(A,0,shift+i*stride,&rank,&offset);
782       RO2P(A,0,rank,offset,&idx[i]);
783     }
784     ierr = ISCreateGeneral(PETSC_COMM_SELF,m,idx,PETSC_OWN_POINTER,rows);CHKERRQ(ierr);
785   }
786   if (cols) {
787     m = a->emat->LocalWidth();
788     shift = a->emat->RowShift();
789     stride = a->emat->RowStride();
790     ierr = PetscMalloc1(m,&idx);CHKERRQ(ierr);
791     for (i=0; i<m; i++) {
792       PetscInt rank,offset;
793       E2RO(A,1,shift+i*stride,&rank,&offset);
794       RO2P(A,1,rank,offset,&idx[i]);
795     }
796     ierr = ISCreateGeneral(PETSC_COMM_SELF,m,idx,PETSC_OWN_POINTER,cols);CHKERRQ(ierr);
797   }
798   PetscFunctionReturn(0);
799 }
800 
801 #undef __FUNCT__
802 #define __FUNCT__ "MatConvert_Elemental_Dense"
803 static PetscErrorCode MatConvert_Elemental_Dense(Mat A,MatType newtype,MatReuse reuse,Mat *B)
804 {
805   Mat                Bmpi;
806   Mat_Elemental      *a = (Mat_Elemental*)A->data;
807   MPI_Comm           comm;
808   PetscErrorCode     ierr;
809   PetscInt           rrank,ridx,crank,cidx,nrows,ncols,i,j;
810   PetscElemScalar    v;
811   PetscBool          s1,s2,s3;
812 
813   PetscFunctionBegin;
814   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
815   ierr = PetscStrcmp(newtype,MATDENSE,&s1);CHKERRQ(ierr);
816   ierr = PetscStrcmp(newtype,MATSEQDENSE,&s2);CHKERRQ(ierr);
817   ierr = PetscStrcmp(newtype,MATMPIDENSE,&s3);CHKERRQ(ierr);
818   if (!s1 && !s2 && !s3) SETERRQ(comm,PETSC_ERR_SUP,"Unsupported New MatType: must be MATDENSE, MATSEQDENSE or MATMPIDENSE");
819   ierr = MatCreate(comm,&Bmpi);CHKERRQ(ierr);
820   ierr = MatSetSizes(Bmpi,A->rmap->n,A->cmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
821   ierr = MatSetType(Bmpi,MATDENSE);CHKERRQ(ierr);
822   ierr = MatSetUp(Bmpi);CHKERRQ(ierr);
823   ierr = MatGetSize(A,&nrows,&ncols);CHKERRQ(ierr);
824   for (i=0; i<nrows; i++) {
825     PetscInt erow,ecol;
826     P2RO(A,0,i,&rrank,&ridx);
827     RO2E(A,0,rrank,ridx,&erow);
828     if (rrank < 0 || ridx < 0 || erow < 0) SETERRQ(comm,PETSC_ERR_PLIB,"Incorrect row translation");
829     for (j=0; j<ncols; j++) {
830       P2RO(A,1,j,&crank,&cidx);
831       RO2E(A,1,crank,cidx,&ecol);
832       if (crank < 0 || cidx < 0 || ecol < 0) SETERRQ(comm,PETSC_ERR_PLIB,"Incorrect col translation");
833       v = a->emat->Get(erow,ecol);
834       ierr = MatSetValues(Bmpi,1,&i,1,&j,(PetscScalar *)&v,INSERT_VALUES);CHKERRQ(ierr);
835     }
836   }
837   ierr = MatAssemblyBegin(Bmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
838   ierr = MatAssemblyEnd(Bmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
839   if (reuse == MAT_REUSE_MATRIX) {
840     ierr = MatHeaderReplace(A,Bmpi);CHKERRQ(ierr);
841   } else {
842     *B = Bmpi;
843   }
844   PetscFunctionReturn(0);
845 }
846 
847 #undef __FUNCT__
848 #define __FUNCT__ "MatDestroy_Elemental"
849 static PetscErrorCode MatDestroy_Elemental(Mat A)
850 {
851   Mat_Elemental      *a = (Mat_Elemental*)A->data;
852   PetscErrorCode     ierr;
853   Mat_Elemental_Grid *commgrid;
854   PetscBool          flg;
855   MPI_Comm           icomm;
856 
857   PetscFunctionBegin;
858   a->interface->Detach();
859   delete a->interface;
860   delete a->esubmat;
861   delete a->emat;
862 
863   elem::mpi::Comm cxxcomm(PetscObjectComm((PetscObject)A));
864   ierr = PetscCommDuplicate(cxxcomm,&icomm,NULL);CHKERRQ(ierr);
865   ierr = MPI_Attr_get(icomm,Petsc_Elemental_keyval,(void**)&commgrid,(int*)&flg);CHKERRQ(ierr);
866   if (--commgrid->grid_refct == 0) {
867     delete commgrid->grid;
868     ierr = PetscFree(commgrid);CHKERRQ(ierr);
869   }
870   ierr = PetscCommDestroy(&icomm);CHKERRQ(ierr);
871   ierr = PetscObjectComposeFunction((PetscObject)A,"MatGetOwnershipIS_C",NULL);CHKERRQ(ierr);
872   ierr = PetscObjectComposeFunction((PetscObject)A,"MatGetFactor_petsc_C",NULL);CHKERRQ(ierr);
873   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverPackage_C",NULL);CHKERRQ(ierr);
874   ierr = PetscFree(A->data);CHKERRQ(ierr);
875   PetscFunctionReturn(0);
876 }
877 
878 #undef __FUNCT__
879 #define __FUNCT__ "MatSetUp_Elemental"
880 PetscErrorCode MatSetUp_Elemental(Mat A)
881 {
882   Mat_Elemental  *a = (Mat_Elemental*)A->data;
883   PetscErrorCode ierr;
884   PetscMPIInt    rsize,csize;
885 
886   PetscFunctionBegin;
887   ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr);
888   ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr);
889 
890   a->emat->Resize(A->rmap->N,A->cmap->N);CHKERRQ(ierr);
891   elem::Zero(*a->emat);
892 
893   ierr = MPI_Comm_size(A->rmap->comm,&rsize);CHKERRQ(ierr);
894   ierr = MPI_Comm_size(A->cmap->comm,&csize);CHKERRQ(ierr);
895   if (csize != rsize) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_INCOMP,"Cannot use row and column communicators of different sizes");
896   a->commsize = rsize;
897   a->mr[0] = A->rmap->N % rsize; if (!a->mr[0]) a->mr[0] = rsize;
898   a->mr[1] = A->cmap->N % csize; if (!a->mr[1]) a->mr[1] = csize;
899   a->m[0]  = A->rmap->N / rsize + (a->mr[0] != rsize);
900   a->m[1]  = A->cmap->N / csize + (a->mr[1] != csize);
901   PetscFunctionReturn(0);
902 }
903 
904 #undef __FUNCT__
905 #define __FUNCT__ "MatAssemblyBegin_Elemental"
906 PetscErrorCode MatAssemblyBegin_Elemental(Mat A, MatAssemblyType type)
907 {
908   Mat_Elemental  *a = (Mat_Elemental*)A->data;
909 
910   PetscFunctionBegin;
911   a->interface->Detach();
912   a->interface->Attach(elem::LOCAL_TO_GLOBAL,*(a->emat));
913   PetscFunctionReturn(0);
914 }
915 
916 #undef __FUNCT__
917 #define __FUNCT__ "MatAssemblyEnd_Elemental"
918 PetscErrorCode MatAssemblyEnd_Elemental(Mat A, MatAssemblyType type)
919 {
920   PetscFunctionBegin;
921   /* Currently does nothing */
922   PetscFunctionReturn(0);
923 }
924 
925 /* -------------------------------------------------------------------*/
926 static struct _MatOps MatOps_Values = {
927        MatSetValues_Elemental,
928        0,
929        0,
930        MatMult_Elemental,
931 /* 4*/ MatMultAdd_Elemental,
932        MatMultTranspose_Elemental,
933        MatMultTransposeAdd_Elemental,
934        MatSolve_Elemental,
935        MatSolveAdd_Elemental,
936        0, //MatSolveTranspose_Elemental,
937 /*10*/ 0, //MatSolveTransposeAdd_Elemental,
938        MatLUFactor_Elemental,
939        MatCholeskyFactor_Elemental,
940        0,
941        MatTranspose_Elemental,
942 /*15*/ MatGetInfo_Elemental,
943        0,
944        MatGetDiagonal_Elemental,
945        MatDiagonalScale_Elemental,
946        MatNorm_Elemental,
947 /*20*/ MatAssemblyBegin_Elemental,
948        MatAssemblyEnd_Elemental,
949        0, //MatSetOption_Elemental,
950        MatZeroEntries_Elemental,
951 /*24*/ 0,
952        MatLUFactorSymbolic_Elemental,
953        MatLUFactorNumeric_Elemental,
954        MatCholeskyFactorSymbolic_Elemental,
955        MatCholeskyFactorNumeric_Elemental,
956 /*29*/ MatSetUp_Elemental,
957        0,
958        0,
959        0,
960        0,
961 /*34*/ MatDuplicate_Elemental,
962        0,
963        0,
964        0,
965        0,
966 /*39*/ MatAXPY_Elemental,
967        0,
968        0,
969        0,
970        MatCopy_Elemental,
971 /*44*/ 0,
972        MatScale_Elemental,
973        0,
974        0,
975        0,
976 /*49*/ 0,
977        0,
978        0,
979        0,
980        0,
981 /*54*/ 0,
982        0,
983        0,
984        0,
985        0,
986 /*59*/ 0,
987        MatDestroy_Elemental,
988        MatView_Elemental,
989        0,
990        0,
991 /*64*/ 0,
992        0,
993        0,
994        0,
995        0,
996 /*69*/ 0,
997        0,
998        MatConvert_Elemental_Dense,
999        0,
1000        0,
1001 /*74*/ 0,
1002        0,
1003        0,
1004        0,
1005        0,
1006 /*79*/ 0,
1007        0,
1008        0,
1009        0,
1010        0,
1011 /*84*/ 0,
1012        0,
1013        0,
1014        0,
1015        0,
1016 /*89*/ MatMatMult_Elemental,
1017        MatMatMultSymbolic_Elemental,
1018        MatMatMultNumeric_Elemental,
1019        0,
1020        0,
1021 /*94*/ 0,
1022        MatMatTransposeMult_Elemental,
1023        MatMatTransposeMultSymbolic_Elemental,
1024        MatMatTransposeMultNumeric_Elemental,
1025        0,
1026 /*99*/ 0,
1027        0,
1028        0,
1029        MatConjugate_Elemental,
1030        0,
1031 /*104*/0,
1032        0,
1033        0,
1034        0,
1035        0,
1036 /*109*/MatMatSolve_Elemental,
1037        0,
1038        0,
1039        0,
1040        0,
1041 /*114*/0,
1042        0,
1043        0,
1044        0,
1045        0,
1046 /*119*/0,
1047        MatHermitianTranspose_Elemental,
1048        0,
1049        0,
1050        0,
1051 /*124*/0,
1052        0,
1053        0,
1054        0,
1055        0,
1056 /*129*/0,
1057        0,
1058        0,
1059        0,
1060        0,
1061 /*134*/0,
1062        0,
1063        0,
1064        0,
1065        0
1066 };
1067 
1068 /*MC
1069    MATELEMENTAL = "elemental" - A matrix type for dense matrices using the Elemental package
1070 
1071    Options Database Keys:
1072 + -mat_type elemental - sets the matrix type to "elemental" during a call to MatSetFromOptions()
1073 - -mat_elemental_grid_height - sets Grid Height for 2D cyclic ordering of internal matrix
1074 
1075   Level: beginner
1076 
1077 .seealso: MATDENSE
1078 M*/
1079 
1080 #undef __FUNCT__
1081 #define __FUNCT__ "MatCreate_Elemental"
1082 PETSC_EXTERN PetscErrorCode MatCreate_Elemental(Mat A)
1083 {
1084   Mat_Elemental      *a;
1085   PetscErrorCode     ierr;
1086   PetscBool          flg,flg1;
1087   Mat_Elemental_Grid *commgrid;
1088   MPI_Comm           icomm;
1089   PetscInt           optv1;
1090 
1091   PetscFunctionBegin;
1092   ierr = PetscElementalInitializePackage();CHKERRQ(ierr);
1093   ierr = PetscMemcpy(A->ops,&MatOps_Values,sizeof(struct _MatOps));CHKERRQ(ierr);
1094   A->insertmode = NOT_SET_VALUES;
1095 
1096   ierr = PetscNewLog(A,&a);CHKERRQ(ierr);
1097   A->data = (void*)a;
1098 
1099   /* Set up the elemental matrix */
1100   elem::mpi::Comm cxxcomm(PetscObjectComm((PetscObject)A));
1101 
1102   /* Grid needs to be shared between multiple Mats on the same communicator, implement by attribute caching on the MPI_Comm */
1103   if (Petsc_Elemental_keyval == MPI_KEYVAL_INVALID) {
1104     ierr = MPI_Keyval_create(MPI_NULL_COPY_FN,MPI_NULL_DELETE_FN,&Petsc_Elemental_keyval,(void*)0);
1105   }
1106   ierr = PetscCommDuplicate(cxxcomm,&icomm,NULL);CHKERRQ(ierr);
1107   ierr = MPI_Attr_get(icomm,Petsc_Elemental_keyval,(void**)&commgrid,(int*)&flg);CHKERRQ(ierr);
1108   if (!flg) {
1109     ierr = PetscNewLog(A,&commgrid);CHKERRQ(ierr);
1110 
1111     ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"Elemental Options","Mat");CHKERRQ(ierr);
1112     /* displayed default grid sizes (CommSize,1) are set by us arbitrarily until elem::Grid() is called */
1113     ierr = PetscOptionsInt("-mat_elemental_grid_height","Grid Height","None",elem::mpi::CommSize(cxxcomm),&optv1,&flg1);CHKERRQ(ierr);
1114     if (flg1) {
1115       if (elem::mpi::CommSize(cxxcomm) % optv1 != 0) {
1116         SETERRQ2(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_INCOMP,"Grid Height %D must evenly divide CommSize %D",optv1,(PetscInt)elem::mpi::CommSize(cxxcomm));
1117       }
1118       commgrid->grid = new elem::Grid(cxxcomm,optv1); /* use user-provided grid height */
1119     } else {
1120       commgrid->grid = new elem::Grid(cxxcomm); /* use Elemental default grid sizes */
1121     }
1122     commgrid->grid_refct = 1;
1123     ierr = MPI_Attr_put(icomm,Petsc_Elemental_keyval,(void*)commgrid);CHKERRQ(ierr);
1124     PetscOptionsEnd();
1125   } else {
1126     commgrid->grid_refct++;
1127   }
1128   ierr = PetscCommDestroy(&icomm);CHKERRQ(ierr);
1129   a->grid      = commgrid->grid;
1130   a->emat      = new elem::DistMatrix<PetscElemScalar>(*a->grid);
1131   a->esubmat   = new elem::Matrix<PetscElemScalar>(1,1);
1132   a->interface = new elem::AxpyInterface<PetscElemScalar>;
1133   a->pivot     = new elem::DistMatrix<PetscInt,elem::VC,elem::STAR>;
1134 
1135   /* build cache for off array entries formed */
1136   a->interface->Attach(elem::LOCAL_TO_GLOBAL,*(a->emat));
1137 
1138   ierr = PetscObjectComposeFunction((PetscObject)A,"MatGetOwnershipIS_C",MatGetOwnershipIS_Elemental);CHKERRQ(ierr);
1139   ierr = PetscObjectComposeFunction((PetscObject)A,"MatGetFactor_elemental_C",MatGetFactor_elemental_elemental);CHKERRQ(ierr);
1140 
1141   ierr = PetscObjectChangeTypeName((PetscObject)A,MATELEMENTAL);CHKERRQ(ierr);
1142   PetscFunctionReturn(0);
1143 }
1144 
1145