1a1f56445SPierre Jolivet #include <../src/mat/impls/shell/shell.h> /*I "petscmat.h" I*/
2a1f56445SPierre Jolivet #include <../src/mat/impls/mffd/mffdimpl.h>
3e884886fSBarry Smith
4f4259b30SLisandro Dalcin PetscFunctionList MatMFFDList = NULL;
5ace3abfcSBarry Smith PetscBool MatMFFDRegisterAllCalled = PETSC_FALSE;
6e884886fSBarry Smith
77087cfbeSBarry Smith PetscClassId MATMFFD_CLASSID;
8166c7f25SBarry Smith PetscLogEvent MATMFFD_Mult;
9e884886fSBarry Smith
10ace3abfcSBarry Smith static PetscBool MatMFFDPackageInitialized = PETSC_FALSE;
1166976f2fSJacob Faibussowitsch
12b022a5c1SBarry Smith /*@C
1311a5261eSBarry Smith MatMFFDFinalizePackage - This function destroys everything in the MATMFFD` package. It is
1411a5261eSBarry Smith called from `PetscFinalize()`.
15b022a5c1SBarry Smith
16b022a5c1SBarry Smith Level: developer
17b022a5c1SBarry Smith
181cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `PetscFinalize()`, `MatCreateMFFD()`, `MatCreateSNESMF()`
19b022a5c1SBarry Smith @*/
MatMFFDFinalizePackage(void)20d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDFinalizePackage(void)
21d71ae5a4SJacob Faibussowitsch {
22b022a5c1SBarry Smith PetscFunctionBegin;
239566063dSJacob Faibussowitsch PetscCall(PetscFunctionListDestroy(&MatMFFDList));
24b022a5c1SBarry Smith MatMFFDPackageInitialized = PETSC_FALSE;
25b022a5c1SBarry Smith MatMFFDRegisterAllCalled = PETSC_FALSE;
263ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
27b022a5c1SBarry Smith }
28b022a5c1SBarry Smith
293ec795f1SBarry Smith /*@C
3011a5261eSBarry Smith MatMFFDInitializePackage - This function initializes everything in the MATMFFD` package. It is called
3111a5261eSBarry Smith from `MatInitializePackage()`.
323ec795f1SBarry Smith
333ec795f1SBarry Smith Level: developer
343ec795f1SBarry Smith
351cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `PetscInitialize()`
363ec795f1SBarry Smith @*/
MatMFFDInitializePackage(void)37d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDInitializePackage(void)
38d71ae5a4SJacob Faibussowitsch {
393ec795f1SBarry Smith char logList[256];
408e81d068SLisandro Dalcin PetscBool opt, pkg;
413ec795f1SBarry Smith
423ec795f1SBarry Smith PetscFunctionBegin;
433ba16761SJacob Faibussowitsch if (MatMFFDPackageInitialized) PetscFunctionReturn(PETSC_SUCCESS);
44b022a5c1SBarry Smith MatMFFDPackageInitialized = PETSC_TRUE;
453ec795f1SBarry Smith /* Register Classes */
469566063dSJacob Faibussowitsch PetscCall(PetscClassIdRegister("MatMFFD", &MATMFFD_CLASSID));
473ec795f1SBarry Smith /* Register Constructors */
489566063dSJacob Faibussowitsch PetscCall(MatMFFDRegisterAll());
493ec795f1SBarry Smith /* Register Events */
509566063dSJacob Faibussowitsch PetscCall(PetscLogEventRegister("MatMult MF", MATMFFD_CLASSID, &MATMFFD_Mult));
51e94e781bSJacob Faibussowitsch /* Process Info */
52e94e781bSJacob Faibussowitsch {
53e94e781bSJacob Faibussowitsch PetscClassId classids[1];
54e94e781bSJacob Faibussowitsch
55e94e781bSJacob Faibussowitsch classids[0] = MATMFFD_CLASSID;
569566063dSJacob Faibussowitsch PetscCall(PetscInfoProcessClass("matmffd", 1, classids));
573ec795f1SBarry Smith }
583ec795f1SBarry Smith /* Process summary exclusions */
599566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetString(NULL, NULL, "-log_exclude", logList, sizeof(logList), &opt));
603ec795f1SBarry Smith if (opt) {
619566063dSJacob Faibussowitsch PetscCall(PetscStrInList("matmffd", logList, ',', &pkg));
629566063dSJacob Faibussowitsch if (pkg) PetscCall(PetscLogEventExcludeClass(MATMFFD_CLASSID));
633ec795f1SBarry Smith }
648e81d068SLisandro Dalcin /* Register package finalizer */
659566063dSJacob Faibussowitsch PetscCall(PetscRegisterFinalize(MatMFFDFinalizePackage));
663ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
673ec795f1SBarry Smith }
683ec795f1SBarry Smith
MatMFFDSetType_MFFD(Mat mat,MatMFFDType ftype)69d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMFFDSetType_MFFD(Mat mat, MatMFFDType ftype)
70d71ae5a4SJacob Faibussowitsch {
71789d8953SBarry Smith MatMFFD ctx;
72789d8953SBarry Smith PetscBool match;
735f80ce2aSJacob Faibussowitsch PetscErrorCode (*r)(MatMFFD);
74789d8953SBarry Smith
75789d8953SBarry Smith PetscFunctionBegin;
76789d8953SBarry Smith PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
774f572ea9SToby Isaac PetscAssertPointer(ftype, 2);
789566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx));
79789d8953SBarry Smith
80789d8953SBarry Smith /* already set, so just return */
819566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)ctx, ftype, &match));
823ba16761SJacob Faibussowitsch if (match) PetscFunctionReturn(PETSC_SUCCESS);
83789d8953SBarry Smith
84789d8953SBarry Smith /* destroy the old one if it exists */
85dbbe0bcdSBarry Smith PetscTryTypeMethod(ctx, destroy);
86789d8953SBarry Smith
879566063dSJacob Faibussowitsch PetscCall(PetscFunctionListFind(MatMFFDList, ftype, &r));
886adde796SStefano Zampini PetscCheck(r, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_UNKNOWN_TYPE, "Unknown MatMFFD type %s given", ftype);
899566063dSJacob Faibussowitsch PetscCall((*r)(ctx));
909566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)ctx, ftype));
913ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
92789d8953SBarry Smith }
93789d8953SBarry Smith
94cc4c1da9SBarry Smith /*@
95e884886fSBarry Smith MatMFFDSetType - Sets the method that is used to compute the
96da81f932SPierre Jolivet differencing parameter for finite difference matrix-free formulations.
97e884886fSBarry Smith
98e884886fSBarry Smith Input Parameters:
9911a5261eSBarry Smith + mat - the "matrix-free" matrix created via `MatCreateSNESMF()`, or `MatCreateMFFD()`
10011a5261eSBarry Smith or `MatSetType`(mat,`MATMFFD`);
10111a5261eSBarry Smith - ftype - the type requested, either `MATMFFD_WP` or `MATMFFD_DS`
102e884886fSBarry Smith
103e884886fSBarry Smith Level: advanced
104e884886fSBarry Smith
10511a5261eSBarry Smith Note:
1062ef1f0ffSBarry Smith For example, such routines can compute `h` for use in
107e884886fSBarry Smith Jacobian-vector products of the form
1082ef1f0ffSBarry Smith .vb
109e884886fSBarry Smith
110e884886fSBarry Smith F(x+ha) - F(x)
111e884886fSBarry Smith F'(u)a ~= ----------------
112e884886fSBarry Smith h
1132ef1f0ffSBarry Smith .ve
114e884886fSBarry Smith
1151cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MATMFFD_WP`, `MATMFFD_DS`, `MatCreateSNESMF()`, `MatMFFDRegister()`, `MatMFFDSetFunction()`, `MatCreateMFFD()`
116e884886fSBarry Smith @*/
MatMFFDSetType(Mat mat,MatMFFDType ftype)117d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDSetType(Mat mat, MatMFFDType ftype)
118d71ae5a4SJacob Faibussowitsch {
119e884886fSBarry Smith PetscFunctionBegin;
1200700a824SBarry Smith PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
1214f572ea9SToby Isaac PetscAssertPointer(ftype, 2);
122cac4c232SBarry Smith PetscTryMethod(mat, "MatMFFDSetType_C", (Mat, MatMFFDType), (mat, ftype));
1233ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
124e884886fSBarry Smith }
125e884886fSBarry Smith
1265d21e1f8SStefano Zampini static PetscErrorCode MatGetDiagonal_MFFD(Mat, Vec);
1275d21e1f8SStefano Zampini
128e884886fSBarry Smith typedef PetscErrorCode (*FCN1)(void *, Vec); /* force argument to next function to not be extern C*/
MatMFFDSetFunctioniBase_MFFD(Mat mat,FCN1 func)129d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMFFDSetFunctioniBase_MFFD(Mat mat, FCN1 func)
130d71ae5a4SJacob Faibussowitsch {
131789d8953SBarry Smith MatMFFD ctx;
132e884886fSBarry Smith
133e884886fSBarry Smith PetscFunctionBegin;
1349566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx));
135e884886fSBarry Smith ctx->funcisetbase = func;
1363ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
137e884886fSBarry Smith }
138e884886fSBarry Smith
139e884886fSBarry Smith typedef PetscErrorCode (*FCN2)(void *, PetscInt, Vec, PetscScalar *); /* force argument to next function to not be extern C*/
MatMFFDSetFunctioni_MFFD(Mat mat,FCN2 funci)140d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMFFDSetFunctioni_MFFD(Mat mat, FCN2 funci)
141d71ae5a4SJacob Faibussowitsch {
142789d8953SBarry Smith MatMFFD ctx;
143e884886fSBarry Smith
144e884886fSBarry Smith PetscFunctionBegin;
1459566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx));
146e884886fSBarry Smith ctx->funci = funci;
14757d50842SBarry Smith PetscCall(MatShellSetOperation(mat, MATOP_GET_DIAGONAL, (PetscErrorCodeFn *)MatGetDiagonal_MFFD));
1483ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
1495d21e1f8SStefano Zampini }
150789d8953SBarry Smith
MatMFFDGetH_MFFD(Mat mat,PetscScalar * h)151d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMFFDGetH_MFFD(Mat mat, PetscScalar *h)
152d71ae5a4SJacob Faibussowitsch {
153789d8953SBarry Smith MatMFFD ctx;
154789d8953SBarry Smith
155789d8953SBarry Smith PetscFunctionBegin;
1569566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx));
157789d8953SBarry Smith *h = ctx->currenth;
1583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
159e884886fSBarry Smith }
160e884886fSBarry Smith
MatMFFDResetHHistory_MFFD(Mat J)161d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMFFDResetHHistory_MFFD(Mat J)
162d71ae5a4SJacob Faibussowitsch {
163789d8953SBarry Smith MatMFFD ctx;
164bc0f08ceSBarry Smith
165bc0f08ceSBarry Smith PetscFunctionBegin;
1669566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(J, &ctx));
167bc0f08ceSBarry Smith ctx->ncurrenth = 0;
1683ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
169bc0f08ceSBarry Smith }
170e884886fSBarry Smith
1711c84c290SBarry Smith /*@C
17220f4b53cSBarry Smith MatMFFDRegister - Adds a method to the `MATMFFD` registry.
1731c84c290SBarry Smith
174cc4c1da9SBarry Smith Not Collective, No Fortran Support
1751c84c290SBarry Smith
1761c84c290SBarry Smith Input Parameters:
17720f4b53cSBarry Smith + sname - name of a new user-defined compute-h module
17820f4b53cSBarry Smith - function - routine to create method context
1791c84c290SBarry Smith
1801c84c290SBarry Smith Level: developer
1811c84c290SBarry Smith
18211a5261eSBarry Smith Note:
18311a5261eSBarry Smith `MatMFFDRegister()` may be called multiple times to add several user-defined solvers.
1841c84c290SBarry Smith
185fe59aa6dSJacob Faibussowitsch Example Usage:
1861c84c290SBarry Smith .vb
187bdf89e91SBarry Smith MatMFFDRegister("my_h", MyHCreate);
1881c84c290SBarry Smith .ve
1891c84c290SBarry Smith
190a3b724e8SBarry Smith Then, your solver can be chosen with the procedural interface via `MatMFFDSetType`(mfctx, "my_h")` or at runtime via the option
191a3b724e8SBarry Smith `-mat_mffd_type my_h`
1921c84c290SBarry Smith
1931cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatMFFDRegisterAll()`, `MatMFFDRegisterDestroy()`
1941c84c290SBarry Smith @*/
MatMFFDRegister(const char sname[],PetscErrorCode (* function)(MatMFFD))195d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDRegister(const char sname[], PetscErrorCode (*function)(MatMFFD))
196d71ae5a4SJacob Faibussowitsch {
197e884886fSBarry Smith PetscFunctionBegin;
1989566063dSJacob Faibussowitsch PetscCall(MatInitializePackage());
1999566063dSJacob Faibussowitsch PetscCall(PetscFunctionListAdd(&MatMFFDList, sname, function));
2003ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
201e884886fSBarry Smith }
202e884886fSBarry Smith
MatDestroy_MFFD(Mat mat)203d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDestroy_MFFD(Mat mat)
204d71ae5a4SJacob Faibussowitsch {
205789d8953SBarry Smith MatMFFD ctx;
206e884886fSBarry Smith
207e884886fSBarry Smith PetscFunctionBegin;
2089566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx));
2099566063dSJacob Faibussowitsch PetscCall(VecDestroy(&ctx->w));
2109566063dSJacob Faibussowitsch PetscCall(VecDestroy(&ctx->current_u));
21148a46eb9SPierre Jolivet if (ctx->current_f_allocated) PetscCall(VecDestroy(&ctx->current_f));
212dbbe0bcdSBarry Smith PetscTryTypeMethod(ctx, destroy);
2139566063dSJacob Faibussowitsch PetscCall(PetscHeaderDestroy(&ctx));
214e884886fSBarry Smith
2159566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDSetBase_C", NULL));
2169566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDSetFunctioniBase_C", NULL));
2179566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDSetFunctioni_C", NULL));
2189566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDSetFunction_C", NULL));
2199566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDSetFunctionError_C", NULL));
2209566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDSetCheckh_C", NULL));
2219566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDSetPeriod_C", NULL));
2229566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDResetHHistory_C", NULL));
2239566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDSetHHistory_C", NULL));
2249566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDSetType_C", NULL));
2259566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDGetH_C", NULL));
2262e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatSNESMFSetReuseBase_C", NULL));
2272e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatSNESMFGetReuseBase_C", NULL));
228ee912ba9SBarry Smith PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatShellSetContext_C", NULL));
2293ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
230e884886fSBarry Smith }
231e884886fSBarry Smith
232e884886fSBarry Smith /*
233e884886fSBarry Smith MatMFFDView_MFFD - Views matrix-free parameters.
234e884886fSBarry Smith
235e884886fSBarry Smith */
MatView_MFFD(Mat J,PetscViewer viewer)236d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatView_MFFD(Mat J, PetscViewer viewer)
237d71ae5a4SJacob Faibussowitsch {
238789d8953SBarry Smith MatMFFD ctx;
2399f196a02SMartin Diehl PetscBool isascii, viewbase, viewfunction;
240a283635eSDmitry Karpeev const char *prefix;
241e884886fSBarry Smith
242e884886fSBarry Smith PetscFunctionBegin;
2439566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(J, &ctx));
2449f196a02SMartin Diehl PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &isascii));
2459f196a02SMartin Diehl if (isascii) {
2469566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Matrix-free approximation:\n"));
2479566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushTab(viewer));
2489566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "err=%g (relative error in function evaluation)\n", (double)ctx->error_rel));
2497adad957SLisandro Dalcin if (!((PetscObject)ctx)->type_name) {
2509566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "The compute h routine has not yet been set\n"));
251e884886fSBarry Smith } else {
2529566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Using %s compute h routine\n", ((PetscObject)ctx)->type_name));
253e884886fSBarry Smith }
254c92e3469SBarry Smith #if defined(PETSC_USE_COMPLEX)
25548a46eb9SPierre Jolivet if (ctx->usecomplex) PetscCall(PetscViewerASCIIPrintf(viewer, "Using Lyness complex number trick to compute the matrix-vector product\n"));
256c92e3469SBarry Smith #endif
257dbbe0bcdSBarry Smith PetscTryTypeMethod(ctx, view, viewer);
2589566063dSJacob Faibussowitsch PetscCall(PetscObjectGetOptionsPrefix((PetscObject)J, &prefix));
259a283635eSDmitry Karpeev
2609566063dSJacob Faibussowitsch PetscCall(PetscOptionsHasName(((PetscObject)J)->options, prefix, "-mat_mffd_view_base", &viewbase));
261a283635eSDmitry Karpeev if (viewbase) {
2629566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Base:\n"));
2639566063dSJacob Faibussowitsch PetscCall(VecView(ctx->current_u, viewer));
264a283635eSDmitry Karpeev }
2659566063dSJacob Faibussowitsch PetscCall(PetscOptionsHasName(((PetscObject)J)->options, prefix, "-mat_mffd_view_function", &viewfunction));
266a283635eSDmitry Karpeev if (viewfunction) {
2679566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Function:\n"));
2689566063dSJacob Faibussowitsch PetscCall(VecView(ctx->current_f, viewer));
269a283635eSDmitry Karpeev }
2709566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopTab(viewer));
27111aeaf0aSBarry Smith }
2723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
273e884886fSBarry Smith }
274e884886fSBarry Smith
275e884886fSBarry Smith /*
276e884886fSBarry Smith MatAssemblyEnd_MFFD - Resets the ctx->ncurrenth to zero. This
277e884886fSBarry Smith allows the user to indicate the beginning of a new linear solve by calling
27801c1178eSBarry Smith MatAssemblyXXX() on the matrix-free matrix. This then allows the
2791d0fab5eSBarry Smith MatCreateMFFD_WP() to properly compute ||U|| only the first time
280e884886fSBarry Smith in the linear solver rather than every time.
2815a576424SJed Brown
282cc2e6a90SBarry Smith This function is referenced directly from MatAssemblyEnd_SNESMF(), which may be in a different shared library hence
283cc2e6a90SBarry Smith it must be labeled as PETSC_EXTERN
284e884886fSBarry Smith */
MatAssemblyEnd_MFFD(Mat J,MatAssemblyType mt)285d6acfc2dSPierre Jolivet PETSC_SINGLE_LIBRARY_VISIBILITY_INTERNAL PetscErrorCode MatAssemblyEnd_MFFD(Mat J, MatAssemblyType mt)
286d71ae5a4SJacob Faibussowitsch {
287789d8953SBarry Smith MatMFFD j;
288e884886fSBarry Smith
289e884886fSBarry Smith PetscFunctionBegin;
2909566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(J, &j));
2919566063dSJacob Faibussowitsch PetscCall(MatMFFDResetHHistory(J));
2923ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
293e884886fSBarry Smith }
294e884886fSBarry Smith
295e884886fSBarry Smith /*
296e884886fSBarry Smith MatMult_MFFD - Default matrix-free form for Jacobian-vector product, y = F'(u)*a:
297e884886fSBarry Smith
298e884886fSBarry Smith y ~= (F(u + ha) - F(u))/h,
299e884886fSBarry Smith where F = nonlinear function, as set by SNESSetFunction()
300e884886fSBarry Smith u = current iterate
301e884886fSBarry Smith h = difference interval
302e884886fSBarry Smith */
MatMult_MFFD(Mat mat,Vec a,Vec y)303d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMult_MFFD(Mat mat, Vec a, Vec y)
304d71ae5a4SJacob Faibussowitsch {
305789d8953SBarry Smith MatMFFD ctx;
306e884886fSBarry Smith PetscScalar h;
307e884886fSBarry Smith Vec w, U, F;
308ace3abfcSBarry Smith PetscBool zeroa;
309e884886fSBarry Smith
310e884886fSBarry Smith PetscFunctionBegin;
3119566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx));
31200045ab3SPierre Jolivet PetscCheck(ctx->current_u, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "MatMFFDSetBase() has not been called, this is often caused by forgetting to call MatAssemblyBegin/End on the first Mat in the SNES compute function");
313e884886fSBarry Smith /* We log matrix-free matrix-vector products separately, so that we can
314e884886fSBarry Smith separate the performance monitoring from the cases that use conventional
315e884886fSBarry Smith storage. We may eventually modify event logging to associate events
316e884886fSBarry Smith with particular objects, hence alleviating the more general problem. */
3179566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MATMFFD_Mult, a, y, 0, 0));
318e884886fSBarry Smith
319e884886fSBarry Smith w = ctx->w;
320e884886fSBarry Smith U = ctx->current_u;
3213ec795f1SBarry Smith F = ctx->current_f;
322e884886fSBarry Smith /*
323e884886fSBarry Smith Compute differencing parameter
324e884886fSBarry Smith */
3254a2f8832SBarry Smith if (!((PetscObject)ctx)->type_name) {
3269566063dSJacob Faibussowitsch PetscCall(MatMFFDSetType(mat, MATMFFD_WP));
3279566063dSJacob Faibussowitsch PetscCall(MatSetFromOptions(mat));
328e884886fSBarry Smith }
329dbbe0bcdSBarry Smith PetscUseTypeMethod(ctx, compute, U, a, &h, &zeroa);
330e884886fSBarry Smith if (zeroa) {
3319566063dSJacob Faibussowitsch PetscCall(VecSet(y, 0.0));
33285d14658SLisandro Dalcin PetscCall(PetscLogEventEnd(MATMFFD_Mult, a, y, 0, 0));
3333ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
334e884886fSBarry Smith }
335e884886fSBarry Smith
33676c63389SBarry Smith PetscCheck(!mat->erroriffailure || !PetscIsInfOrNanScalar(h), PETSC_COMM_SELF, PETSC_ERR_PLIB, "Computed NaN differencing parameter h");
33748a46eb9SPierre Jolivet if (ctx->checkh) PetscCall((*ctx->checkh)(ctx->checkhctx, U, a, &h));
338e884886fSBarry Smith
339e884886fSBarry Smith /* keep a record of the current differencing parameter h */
340e884886fSBarry Smith ctx->currenth = h;
341e884886fSBarry Smith #if defined(PETSC_USE_COMPLEX)
3429566063dSJacob Faibussowitsch PetscCall(PetscInfo(mat, "Current differencing parameter: %g + %g i\n", (double)PetscRealPart(h), (double)PetscImaginaryPart(h)));
343e884886fSBarry Smith #else
3449566063dSJacob Faibussowitsch PetscCall(PetscInfo(mat, "Current differencing parameter: %15.12e\n", (double)PetscRealPart(h)));
345e884886fSBarry Smith #endif
346ad540459SPierre Jolivet if (ctx->historyh && ctx->ncurrenth < ctx->maxcurrenth) ctx->historyh[ctx->ncurrenth] = h;
347e884886fSBarry Smith ctx->ncurrenth++;
348e884886fSBarry Smith
349c92e3469SBarry Smith #if defined(PETSC_USE_COMPLEX)
350c92e3469SBarry Smith if (ctx->usecomplex) h = PETSC_i * h;
351c92e3469SBarry Smith #endif
352c92e3469SBarry Smith
353e884886fSBarry Smith /* w = u + ha */
3549566063dSJacob Faibussowitsch PetscCall(VecWAXPY(w, h, a, U));
355e884886fSBarry Smith
3561b797266SDmitry Karpeev /* compute func(U) as base for differencing; only needed first time in and not when provided by user */
35748a46eb9SPierre Jolivet if (ctx->ncurrenth == 1 && ctx->current_f_allocated) PetscCall((*ctx->func)(ctx->funcctx, U, F));
3589566063dSJacob Faibussowitsch PetscCall((*ctx->func)(ctx->funcctx, w, y));
359e884886fSBarry Smith
360c92e3469SBarry Smith #if defined(PETSC_USE_COMPLEX)
361c92e3469SBarry Smith if (ctx->usecomplex) {
3629566063dSJacob Faibussowitsch PetscCall(VecImaginaryPart(y));
363c92e3469SBarry Smith h = PetscImaginaryPart(h);
364c92e3469SBarry Smith } else {
3659566063dSJacob Faibussowitsch PetscCall(VecAXPY(y, -1.0, F));
366c92e3469SBarry Smith }
367c92e3469SBarry Smith #else
3689566063dSJacob Faibussowitsch PetscCall(VecAXPY(y, -1.0, F));
369c92e3469SBarry Smith #endif
3709566063dSJacob Faibussowitsch PetscCall(VecScale(y, 1.0 / h));
3719566063dSJacob Faibussowitsch if (mat->nullsp) PetscCall(MatNullSpaceRemove(mat->nullsp, y));
372e884886fSBarry Smith
3739566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MATMFFD_Mult, a, y, 0, 0));
3743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
375e884886fSBarry Smith }
376e884886fSBarry Smith
377e884886fSBarry Smith /*
37801c1178eSBarry Smith MatGetDiagonal_MFFD - Gets the diagonal for a matrix-free matrix
379e884886fSBarry Smith
380e884886fSBarry Smith y ~= (F(u + ha) - F(u))/h,
381e884886fSBarry Smith where F = nonlinear function, as set by SNESSetFunction()
382e884886fSBarry Smith u = current iterate
383e884886fSBarry Smith h = difference interval
384e884886fSBarry Smith */
MatGetDiagonal_MFFD(Mat mat,Vec a)38566976f2fSJacob Faibussowitsch static PetscErrorCode MatGetDiagonal_MFFD(Mat mat, Vec a)
386d71ae5a4SJacob Faibussowitsch {
387789d8953SBarry Smith MatMFFD ctx;
388e884886fSBarry Smith PetscScalar h, *aa, *ww, v;
389e884886fSBarry Smith PetscReal epsilon = PETSC_SQRT_MACHINE_EPSILON, umin = 100.0 * PETSC_SQRT_MACHINE_EPSILON;
390e884886fSBarry Smith Vec w, U;
391e884886fSBarry Smith PetscInt i, rstart, rend;
392e884886fSBarry Smith
393e884886fSBarry Smith PetscFunctionBegin;
3949566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx));
39528b400f6SJacob Faibussowitsch PetscCheck(ctx->func, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Requires calling MatMFFDSetFunction() first");
39628b400f6SJacob Faibussowitsch PetscCheck(ctx->funci, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Requires calling MatMFFDSetFunctioni() first");
397e884886fSBarry Smith w = ctx->w;
398e884886fSBarry Smith U = ctx->current_u;
3999566063dSJacob Faibussowitsch PetscCall((*ctx->func)(ctx->funcctx, U, a));
4001baa6e33SBarry Smith if (ctx->funcisetbase) PetscCall((*ctx->funcisetbase)(ctx->funcctx, U));
4019566063dSJacob Faibussowitsch PetscCall(VecCopy(U, w));
402e884886fSBarry Smith
4039566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(a, &rstart, &rend));
4049566063dSJacob Faibussowitsch PetscCall(VecGetArray(a, &aa));
405e884886fSBarry Smith for (i = rstart; i < rend; i++) {
4069566063dSJacob Faibussowitsch PetscCall(VecGetArray(w, &ww));
407e884886fSBarry Smith h = ww[i - rstart];
408e884886fSBarry Smith if (h == 0.0) h = 1.0;
409e884886fSBarry Smith if (PetscAbsScalar(h) < umin && PetscRealPart(h) >= 0.0) h = umin;
410e884886fSBarry Smith else if (PetscRealPart(h) < 0.0 && PetscAbsScalar(h) < umin) h = -umin;
411e884886fSBarry Smith h *= epsilon;
412e884886fSBarry Smith
413e884886fSBarry Smith ww[i - rstart] += h;
4149566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(w, &ww));
4159566063dSJacob Faibussowitsch PetscCall((*ctx->funci)(ctx->funcctx, i, w, &v));
416e884886fSBarry Smith aa[i - rstart] = (v - aa[i - rstart]) / h;
417e884886fSBarry Smith
4189566063dSJacob Faibussowitsch PetscCall(VecGetArray(w, &ww));
419e884886fSBarry Smith ww[i - rstart] -= h;
4209566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(w, &ww));
421e884886fSBarry Smith }
4229566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(a, &aa));
4233ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
424e884886fSBarry Smith }
425e884886fSBarry Smith
MatMFFDSetBase_MFFD(Mat J,Vec U,Vec F)426d6acfc2dSPierre Jolivet PETSC_SINGLE_LIBRARY_VISIBILITY_INTERNAL PetscErrorCode MatMFFDSetBase_MFFD(Mat J, Vec U, Vec F)
427d71ae5a4SJacob Faibussowitsch {
428789d8953SBarry Smith MatMFFD ctx;
429e884886fSBarry Smith
430e884886fSBarry Smith PetscFunctionBegin;
4319566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(J, &ctx));
4329566063dSJacob Faibussowitsch PetscCall(MatMFFDResetHHistory(J));
433c51ad4d4SStefano Zampini if (!ctx->current_u) {
4349566063dSJacob Faibussowitsch PetscCall(VecDuplicate(U, &ctx->current_u));
4359566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(ctx->current_u));
436c51ad4d4SStefano Zampini }
4379566063dSJacob Faibussowitsch PetscCall(VecLockReadPop(ctx->current_u));
4389566063dSJacob Faibussowitsch PetscCall(VecCopy(U, ctx->current_u));
4399566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(ctx->current_u));
44052121784SBarry Smith if (F) {
4419566063dSJacob Faibussowitsch if (ctx->current_f_allocated) PetscCall(VecDestroy(&ctx->current_f));
4423ec795f1SBarry Smith ctx->current_f = F;
443cfe22f5eSBarry Smith ctx->current_f_allocated = PETSC_FALSE;
444cfe22f5eSBarry Smith } else if (!ctx->current_f_allocated) {
4459566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(J, NULL, &ctx->current_f));
446cfe22f5eSBarry Smith ctx->current_f_allocated = PETSC_TRUE;
44752121784SBarry Smith }
44848a46eb9SPierre Jolivet if (!ctx->w) PetscCall(VecDuplicate(ctx->current_u, &ctx->w));
449e884886fSBarry Smith J->assembled = PETSC_TRUE;
4503ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
451e884886fSBarry Smith }
4525a576424SJed Brown
453e884886fSBarry Smith typedef PetscErrorCode (*FCN3)(void *, Vec, Vec, PetscScalar *); /* force argument to next function to not be extern C*/
MatMFFDSetCheckh_MFFD(Mat J,FCN3 fun,void * ectx)454d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMFFDSetCheckh_MFFD(Mat J, FCN3 fun, void *ectx)
455d71ae5a4SJacob Faibussowitsch {
456789d8953SBarry Smith MatMFFD ctx;
457e884886fSBarry Smith
458e884886fSBarry Smith PetscFunctionBegin;
4599566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(J, &ctx));
460e884886fSBarry Smith ctx->checkh = fun;
461e884886fSBarry Smith ctx->checkhctx = ectx;
4623ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
463e884886fSBarry Smith }
464e884886fSBarry Smith
465cc4c1da9SBarry Smith /*@
4666aa9148fSLisandro Dalcin MatMFFDSetOptionsPrefix - Sets the prefix used for searching for all
46711a5261eSBarry Smith MATMFFD` options in the database.
4686aa9148fSLisandro Dalcin
469c3339decSBarry Smith Collective
4706aa9148fSLisandro Dalcin
471d8d19677SJose E. Roman Input Parameters:
472fe59aa6dSJacob Faibussowitsch + mat - the `MATMFFD` context
4736aa9148fSLisandro Dalcin - prefix - the prefix to prepend to all option names
4746aa9148fSLisandro Dalcin
47511a5261eSBarry Smith Note:
4766aa9148fSLisandro Dalcin A hyphen (-) must NOT be given at the beginning of the prefix name.
4776aa9148fSLisandro Dalcin The first character of all runtime options is AUTOMATICALLY the hyphen.
4786aa9148fSLisandro Dalcin
4796aa9148fSLisandro Dalcin Level: advanced
4806aa9148fSLisandro Dalcin
4811cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatSetFromOptions()`, `MatCreateSNESMF()`, `MatCreateMFFD()`
4826aa9148fSLisandro Dalcin @*/
MatMFFDSetOptionsPrefix(Mat mat,const char prefix[])483d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDSetOptionsPrefix(Mat mat, const char prefix[])
484d71ae5a4SJacob Faibussowitsch {
485789d8953SBarry Smith MatMFFD mfctx;
4865fd66863SKarl Rupp
4876aa9148fSLisandro Dalcin PetscFunctionBegin;
4880700a824SBarry Smith PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
4899566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &mfctx));
4900700a824SBarry Smith PetscValidHeaderSpecific(mfctx, MATMFFD_CLASSID, 1);
4919566063dSJacob Faibussowitsch PetscCall(PetscObjectSetOptionsPrefix((PetscObject)mfctx, prefix));
4923ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
4936aa9148fSLisandro Dalcin }
4946aa9148fSLisandro Dalcin
MatSetFromOptions_MFFD(Mat mat,PetscOptionItems PetscOptionsObject)495ce78bad3SBarry Smith static PetscErrorCode MatSetFromOptions_MFFD(Mat mat, PetscOptionItems PetscOptionsObject)
496d71ae5a4SJacob Faibussowitsch {
497789d8953SBarry Smith MatMFFD mfctx;
498ace3abfcSBarry Smith PetscBool flg;
499e884886fSBarry Smith char ftype[256];
500e884886fSBarry Smith
501e884886fSBarry Smith PetscFunctionBegin;
5029566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &mfctx));
503dbbe0bcdSBarry Smith PetscValidHeaderSpecific(mfctx, MATMFFD_CLASSID, 1);
504d0609cedSBarry Smith PetscObjectOptionsBegin((PetscObject)mfctx);
5059566063dSJacob Faibussowitsch PetscCall(PetscOptionsFList("-mat_mffd_type", "Matrix free type", "MatMFFDSetType", MatMFFDList, ((PetscObject)mfctx)->type_name, ftype, 256, &flg));
5061baa6e33SBarry Smith if (flg) PetscCall(MatMFFDSetType(mat, ftype));
507e884886fSBarry Smith
5089566063dSJacob Faibussowitsch PetscCall(PetscOptionsReal("-mat_mffd_err", "set sqrt relative error in function", "MatMFFDSetFunctionError", mfctx->error_rel, &mfctx->error_rel, NULL));
5099566063dSJacob Faibussowitsch PetscCall(PetscOptionsInt("-mat_mffd_period", "how often h is recomputed", "MatMFFDSetPeriod", mfctx->recomputeperiod, &mfctx->recomputeperiod, NULL));
510e884886fSBarry Smith
51190d69ab7SBarry Smith flg = PETSC_FALSE;
5129566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mat_mffd_check_positivity", "Insure that U + h*a is nonnegative", "MatMFFDSetCheckh", flg, &flg, NULL));
5131baa6e33SBarry Smith if (flg) PetscCall(MatMFFDSetCheckh(mat, MatMFFDCheckPositivity, NULL));
514c92e3469SBarry Smith #if defined(PETSC_USE_COMPLEX)
5159566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mat_mffd_complex", "Use Lyness complex number trick to compute the matrix-vector product", "None", mfctx->usecomplex, &mfctx->usecomplex, NULL));
516c92e3469SBarry Smith #endif
517dbbe0bcdSBarry Smith PetscTryTypeMethod(mfctx, setfromoptions, PetscOptionsObject);
518d0609cedSBarry Smith PetscOptionsEnd();
5193ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
520e884886fSBarry Smith }
521e884886fSBarry Smith
MatMFFDSetPeriod_MFFD(Mat mat,PetscInt period)522d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMFFDSetPeriod_MFFD(Mat mat, PetscInt period)
523d71ae5a4SJacob Faibussowitsch {
524789d8953SBarry Smith MatMFFD ctx;
525bc0f08ceSBarry Smith
526bc0f08ceSBarry Smith PetscFunctionBegin;
5279566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx));
528bc0f08ceSBarry Smith ctx->recomputeperiod = period;
5293ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
530bc0f08ceSBarry Smith }
531bc0f08ceSBarry Smith
MatMFFDSetFunction_MFFD(Mat mat,MatMFFDFn * func,void * funcctx)5324f3e17a8SBarry Smith static PetscErrorCode MatMFFDSetFunction_MFFD(Mat mat, MatMFFDFn *func, void *funcctx)
533d71ae5a4SJacob Faibussowitsch {
534789d8953SBarry Smith MatMFFD ctx;
535bc0f08ceSBarry Smith
536bc0f08ceSBarry Smith PetscFunctionBegin;
5379566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx));
538bc0f08ceSBarry Smith ctx->func = func;
539bc0f08ceSBarry Smith ctx->funcctx = funcctx;
5403ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
541bc0f08ceSBarry Smith }
542bc0f08ceSBarry Smith
MatMFFDSetFunctionError_MFFD(Mat mat,PetscReal error)543d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMFFDSetFunctionError_MFFD(Mat mat, PetscReal error)
544d71ae5a4SJacob Faibussowitsch {
54513bcc0bdSJacob Faibussowitsch PetscFunctionBegin;
54613bcc0bdSJacob Faibussowitsch if (error != (PetscReal)PETSC_DEFAULT) {
547789d8953SBarry Smith MatMFFD ctx;
548bc0f08ceSBarry Smith
5499566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx));
55013bcc0bdSJacob Faibussowitsch ctx->error_rel = error;
55113bcc0bdSJacob Faibussowitsch }
5523ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
553bc0f08ceSBarry Smith }
554bc0f08ceSBarry Smith
MatMFFDSetHHistory_MFFD(Mat J,PetscScalar history[],PetscInt nhistory)55566976f2fSJacob Faibussowitsch static PetscErrorCode MatMFFDSetHHistory_MFFD(Mat J, PetscScalar history[], PetscInt nhistory)
556d71ae5a4SJacob Faibussowitsch {
557789d8953SBarry Smith MatMFFD ctx;
558789d8953SBarry Smith
5593b49f96aSBarry Smith PetscFunctionBegin;
5609566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(J, &ctx));
561789d8953SBarry Smith ctx->historyh = history;
562789d8953SBarry Smith ctx->maxcurrenth = nhistory;
563789d8953SBarry Smith ctx->currenth = 0.;
5643ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
5653b49f96aSBarry Smith }
5663b49f96aSBarry Smith
567e884886fSBarry Smith /*MC
56801c1178eSBarry Smith MATMFFD - "mffd" - A matrix-free matrix type.
569e884886fSBarry Smith
570e884886fSBarry Smith Level: advanced
571e884886fSBarry Smith
572a1f56445SPierre Jolivet Developer Notes:
5732ef1f0ffSBarry Smith This is implemented on top of `MATSHELL` to get support for scaling and shifting without requiring duplicate code
574789d8953SBarry Smith
575ee912ba9SBarry Smith Users should not MatShell... operations on this class, there is some error checking for that incorrect usage
576ee912ba9SBarry Smith
5771cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreateMFFD()`, `MatCreateSNESMF()`, `MatMFFDSetFunction()`, `MatMFFDSetType()`,
578db781477SPatrick Sanan `MatMFFDSetFunctionError()`, `MatMFFDDSSetUmin()`, `MatMFFDSetFunction()`
579db781477SPatrick Sanan `MatMFFDSetHHistory()`, `MatMFFDResetHHistory()`, `MatCreateSNESMF()`,
580db781477SPatrick Sanan `MatMFFDGetH()`,
581e884886fSBarry Smith M*/
MatCreate_MFFD(Mat A)582d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MatCreate_MFFD(Mat A)
583d71ae5a4SJacob Faibussowitsch {
584e884886fSBarry Smith MatMFFD mfctx;
585e884886fSBarry Smith
586e884886fSBarry Smith PetscFunctionBegin;
5879566063dSJacob Faibussowitsch PetscCall(MatMFFDInitializePackage());
588e884886fSBarry Smith
5899566063dSJacob Faibussowitsch PetscCall(PetscHeaderCreate(mfctx, MATMFFD_CLASSID, "MatMFFD", "Matrix-free Finite Differencing", "Mat", PetscObjectComm((PetscObject)A), NULL, NULL));
5902205254eSKarl Rupp
591e884886fSBarry Smith mfctx->error_rel = PETSC_SQRT_MACHINE_EPSILON;
592e884886fSBarry Smith mfctx->recomputeperiod = 1;
593e884886fSBarry Smith mfctx->count = 0;
594e884886fSBarry Smith mfctx->currenth = 0.0;
5950298fd71SBarry Smith mfctx->historyh = NULL;
596e884886fSBarry Smith mfctx->ncurrenth = 0;
597e884886fSBarry Smith mfctx->maxcurrenth = 0;
598f4259b30SLisandro Dalcin ((PetscObject)mfctx)->type_name = NULL;
599e884886fSBarry Smith
600e884886fSBarry Smith /*
601e884886fSBarry Smith Create the empty data structure to contain compute-h routines.
602e884886fSBarry Smith These will be filled in below from the command line options or
603e884886fSBarry Smith a later call with MatMFFDSetType() or if that is not called
604e884886fSBarry Smith then it will default in the first use of MatMult_MFFD()
605e884886fSBarry Smith */
606f4259b30SLisandro Dalcin mfctx->ops->compute = NULL;
607f4259b30SLisandro Dalcin mfctx->ops->destroy = NULL;
608f4259b30SLisandro Dalcin mfctx->ops->view = NULL;
609f4259b30SLisandro Dalcin mfctx->ops->setfromoptions = NULL;
610f4259b30SLisandro Dalcin mfctx->hctx = NULL;
611e884886fSBarry Smith
612f4259b30SLisandro Dalcin mfctx->func = NULL;
613f4259b30SLisandro Dalcin mfctx->funcctx = NULL;
6140298fd71SBarry Smith mfctx->w = NULL;
615789d8953SBarry Smith mfctx->mat = A;
616e884886fSBarry Smith
6179566063dSJacob Faibussowitsch PetscCall(MatSetType(A, MATSHELL));
6189566063dSJacob Faibussowitsch PetscCall(MatShellSetContext(A, mfctx));
61957d50842SBarry Smith PetscCall(MatShellSetOperation(A, MATOP_MULT, (PetscErrorCodeFn *)MatMult_MFFD));
62057d50842SBarry Smith PetscCall(MatShellSetOperation(A, MATOP_DESTROY, (PetscErrorCodeFn *)MatDestroy_MFFD));
62157d50842SBarry Smith PetscCall(MatShellSetOperation(A, MATOP_VIEW, (PetscErrorCodeFn *)MatView_MFFD));
62257d50842SBarry Smith PetscCall(MatShellSetOperation(A, MATOP_ASSEMBLY_END, (PetscErrorCodeFn *)MatAssemblyEnd_MFFD));
62357d50842SBarry Smith PetscCall(MatShellSetOperation(A, MATOP_SET_FROM_OPTIONS, (PetscErrorCodeFn *)MatSetFromOptions_MFFD));
624a1f56445SPierre Jolivet PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatShellSetContext_C", MatShellSetContext_Immutable));
625a1f56445SPierre Jolivet PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatShellSetContextDestroy_C", MatShellSetContextDestroy_Immutable));
626a1f56445SPierre Jolivet PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatShellSetManageScalingShifts_C", MatShellSetManageScalingShifts_Immutable));
627e884886fSBarry Smith
6289566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDSetBase_C", MatMFFDSetBase_MFFD));
6299566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDSetFunctioniBase_C", MatMFFDSetFunctioniBase_MFFD));
6309566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDSetFunctioni_C", MatMFFDSetFunctioni_MFFD));
6319566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDSetFunction_C", MatMFFDSetFunction_MFFD));
6329566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDSetCheckh_C", MatMFFDSetCheckh_MFFD));
6339566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDSetPeriod_C", MatMFFDSetPeriod_MFFD));
6349566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDSetFunctionError_C", MatMFFDSetFunctionError_MFFD));
6359566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDResetHHistory_C", MatMFFDResetHHistory_MFFD));
6369566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDSetHHistory_C", MatMFFDSetHHistory_MFFD));
6379566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDSetType_C", MatMFFDSetType_MFFD));
6389566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDGetH_C", MatMFFDGetH_MFFD));
6399566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)A, MATMFFD));
6403ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
641e884886fSBarry Smith }
642e884886fSBarry Smith
643e884886fSBarry Smith /*@
6440b4b7b1cSBarry Smith MatCreateMFFD - Creates a matrix-free matrix of type `MATMFFD` that uses finite differences on a provided function to
6450b4b7b1cSBarry Smith approximately multiply a vector by the matrix (Jacobian) . See also `MatCreateSNESMF()`
646e884886fSBarry Smith
64711a5261eSBarry Smith Collective
648e884886fSBarry Smith
649e884886fSBarry Smith Input Parameters:
650fef1beadSBarry Smith + comm - MPI communicator
6512ef1f0ffSBarry Smith . m - number of local rows (or `PETSC_DECIDE` to have calculated if `M` is given)
652fef1beadSBarry Smith This value should be the same as the local size used in creating the
653fef1beadSBarry Smith y vector for the matrix-vector product y = Ax.
654fef1beadSBarry Smith . n - This value should be the same as the local size used in creating the
65511a5261eSBarry Smith x vector for the matrix-vector product y = Ax. (or `PETSC_DECIDE` to have
6562ef1f0ffSBarry Smith calculated if `N` is given) For square matrices `n` is almost always `m`.
6572ef1f0ffSBarry Smith . M - number of global rows (or `PETSC_DETERMINE` to have calculated if `m` is given)
6582ef1f0ffSBarry Smith - N - number of global columns (or `PETSC_DETERMINE` to have calculated if `n` is given)
659fef1beadSBarry Smith
660e884886fSBarry Smith Output Parameter:
661e884886fSBarry Smith . J - the matrix-free matrix
662e884886fSBarry Smith
66311a5261eSBarry Smith Options Database Keys:
66411a5261eSBarry Smith + -mat_mffd_type - wp or ds (see `MATMFFD_WP` or `MATMFFD_DS`)
665c92e3469SBarry Smith . -mat_mffd_err - square root of estimated relative error in function evaluation
666c92e3469SBarry Smith . -mat_mffd_period - how often h is recomputed, defaults to 1, every time
6672ef1f0ffSBarry Smith . -mat_mffd_check_positivity - possibly decrease `h` until U + h*a has only positive values
66811a5261eSBarry Smith . -mat_mffd_umin <umin> - Sets umin (for default PETSc routine that computes h only)
6690b4b7b1cSBarry Smith . -mat_mffd_complex - use the Lyness trick with complex numbers to compute the matrix-vector product instead of differencing
670c92e3469SBarry Smith (requires real valued functions but that PETSc be configured for complex numbers)
6710b4b7b1cSBarry Smith . -snes_mf - use the finite difference based matrix-free matrix with `SNESSolve()` and no preconditioner
6720b4b7b1cSBarry Smith - -snes_mf_operator - use the finite difference based matrix-free matrix with `SNESSolve()` but construct a preconditioner
6730b4b7b1cSBarry Smith using the matrix passed as `pmat` to `SNESSetJacobian()`.
6749c6ac3b3SBarry Smith
675e884886fSBarry Smith Level: advanced
676e884886fSBarry Smith
677e884886fSBarry Smith Notes:
6780b4b7b1cSBarry Smith Use `MatMFFDSetFunction()` to provide the function that will be differenced to compute the matrix-vector product.
6790b4b7b1cSBarry Smith
6800b4b7b1cSBarry Smith The matrix-free matrix context contains the function pointers
681e884886fSBarry Smith and work space for performing finite difference approximations of
682e884886fSBarry Smith Jacobian-vector products, F'(u)*a,
683e884886fSBarry Smith
684e884886fSBarry Smith The default code uses the following approach to compute h
685e884886fSBarry Smith
686e884886fSBarry Smith .vb
687e884886fSBarry Smith F'(u)*a = [F(u+h*a) - F(u)]/h where
688e884886fSBarry Smith h = error_rel*u'a/||a||^2 if |u'a| > umin*||a||_{1}
689e884886fSBarry Smith = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2 otherwise
690e884886fSBarry Smith where
691e884886fSBarry Smith error_rel = square root of relative error in function evaluation
692e884886fSBarry Smith umin = minimum iterate parameter
693e884886fSBarry Smith .ve
694e884886fSBarry Smith
6950b4b7b1cSBarry Smith To have `SNES` use the matrix-free finite difference matrix-vector product and not provide a separate matrix
6960b4b7b1cSBarry Smith from which to compute the preconditioner (the `pmat` argument `SNESSetJacobian()`), then simply call `SNESSetJacobian()`
6970b4b7b1cSBarry Smith with `NULL` for the matrices and `MatMFFDComputeJacobian()`. Or use the options database option `-snes_mf`
698ca93e954SBarry Smith
6990b4b7b1cSBarry Smith The user can set `error_rel` via `MatMFFDSetFunctionError()` and `umin` via `MatMFFDDSSetUmin()`.
700e884886fSBarry Smith
7010b4b7b1cSBarry Smith Use `MATSHELL` or `MatCreateShell()` to provide your own custom matrix-vector operation.
702e884886fSBarry Smith
7031cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatDestroy()`, `MatMFFDSetFunctionError()`, `MatMFFDDSSetUmin()`, `MatMFFDSetFunction()`
7040b4b7b1cSBarry Smith `MatMFFDSetHHistory()`, `MatMFFDResetHHistory()`, `MatCreateSNESMF()`, `MatCreateShell()`, `MATSHELL`,
705db781477SPatrick Sanan `MatMFFDGetH()`, `MatMFFDRegister()`, `MatMFFDComputeJacobian()`
706e884886fSBarry Smith @*/
MatCreateMFFD(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,Mat * J)707d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateMFFD(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, Mat *J)
708d71ae5a4SJacob Faibussowitsch {
709e884886fSBarry Smith PetscFunctionBegin;
7109566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, J));
7119566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*J, m, n, M, N));
7129566063dSJacob Faibussowitsch PetscCall(MatSetType(*J, MATMFFD));
7139566063dSJacob Faibussowitsch PetscCall(MatSetUp(*J));
7143ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
715e884886fSBarry Smith }
716e884886fSBarry Smith
717e884886fSBarry Smith /*@
71811a5261eSBarry Smith MatMFFDGetH - Gets the last value that was used as the differencing for a `MATMFFD` matrix
719e884886fSBarry Smith parameter.
720e884886fSBarry Smith
721e884886fSBarry Smith Not Collective
722e884886fSBarry Smith
723e884886fSBarry Smith Input Parameters:
72411a5261eSBarry Smith . mat - the `MATMFFD` matrix
725e884886fSBarry Smith
726fd292e60Sprj- Output Parameter:
727e884886fSBarry Smith . h - the differencing step size
728e884886fSBarry Smith
729e884886fSBarry Smith Level: advanced
730e884886fSBarry Smith
731fe59aa6dSJacob Faibussowitsch .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatCreateSNESMF()`, `MatMFFDSetHHistory()`, `MatCreateMFFD()`, `MatMFFDResetHHistory()`
732e884886fSBarry Smith @*/
MatMFFDGetH(Mat mat,PetscScalar * h)733d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDGetH(Mat mat, PetscScalar *h)
734d71ae5a4SJacob Faibussowitsch {
735e884886fSBarry Smith PetscFunctionBegin;
73688b4c220SStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
7374f572ea9SToby Isaac PetscAssertPointer(h, 2);
738cac4c232SBarry Smith PetscUseMethod(mat, "MatMFFDGetH_C", (Mat, PetscScalar *), (mat, h));
7393ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
740e884886fSBarry Smith }
741e884886fSBarry Smith
742e884886fSBarry Smith /*@C
74301c1178eSBarry Smith MatMFFDSetFunction - Sets the function used in applying the matrix-free `MATMFFD` matrix.
744e884886fSBarry Smith
745c3339decSBarry Smith Logically Collective
746e884886fSBarry Smith
747e884886fSBarry Smith Input Parameters:
74801c1178eSBarry Smith + mat - the matrix-free matrix `MATMFFD` created via `MatCreateSNESMF()` or `MatCreateMFFD()`
749e884886fSBarry Smith . func - the function to use
750e884886fSBarry Smith - funcctx - optional function context passed to function
751e884886fSBarry Smith
752e884886fSBarry Smith Level: advanced
753e884886fSBarry Smith
754e884886fSBarry Smith Notes:
75501c1178eSBarry Smith If you use this you MUST call `MatAssemblyBegin()` and `MatAssemblyEnd()` on the matrix-free
756e884886fSBarry Smith matrix inside your compute Jacobian routine
757e884886fSBarry Smith
75811a5261eSBarry Smith If this is not set then it will use the function set with `SNESSetFunction()` if `MatCreateSNESMF()` was used.
759e884886fSBarry Smith
7604f3e17a8SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatMFFDFn`, `MatCreateSNESMF()`, `MatMFFDGetH()`, `MatCreateMFFD()`,
7612920cce0SJacob Faibussowitsch `MatMFFDSetHHistory()`, `MatMFFDResetHHistory()`, `SNESSetFunction()`
762e884886fSBarry Smith @*/
MatMFFDSetFunction(Mat mat,MatMFFDFn * func,void * funcctx)7634f3e17a8SBarry Smith PetscErrorCode MatMFFDSetFunction(Mat mat, MatMFFDFn *func, void *funcctx)
764d71ae5a4SJacob Faibussowitsch {
765e884886fSBarry Smith PetscFunctionBegin;
76688b4c220SStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
7674f3e17a8SBarry Smith PetscTryMethod(mat, "MatMFFDSetFunction_C", (Mat, MatMFFDFn *, void *), (mat, func, funcctx));
7683ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
769e884886fSBarry Smith }
770e884886fSBarry Smith
771e884886fSBarry Smith /*@C
7724f3e17a8SBarry Smith MatMFFDSetFunctioni - Sets the function for computing a single component for a `MATMFFD` matrix
773e884886fSBarry Smith
774c3339decSBarry Smith Logically Collective
775e884886fSBarry Smith
776e884886fSBarry Smith Input Parameters:
77701c1178eSBarry Smith + mat - the matrix-free matrix `MATMFFD`
778e884886fSBarry Smith - funci - the function to use
779e884886fSBarry Smith
780e884886fSBarry Smith Level: advanced
781e884886fSBarry Smith
782e884886fSBarry Smith Notes:
78301c1178eSBarry Smith If you use this you MUST call `MatAssemblyBegin()` and `MatAssemblyEnd()` on the matrix-free
78494eb4328SStefano Zampini matrix inside your compute Jacobian routine.
78511a5261eSBarry Smith
78694eb4328SStefano Zampini This function is necessary to compute the diagonal of the matrix.
7874f3e17a8SBarry Smith `funci` must not contain any MPI call as it is called inside a loop on the local portion of the vector.
788e884886fSBarry Smith
7894f3e17a8SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatMFFDiFn`, `MatCreateSNESMF()`, `MatMFFDGetH()`, `MatMFFDSetHHistory()`, `MatMFFDResetHHistory()`,
7904f3e17a8SBarry Smith `SNESSetFunction()`, `MatGetDiagonal()`
791e884886fSBarry Smith @*/
MatMFFDSetFunctioni(Mat mat,MatMFFDiFn * funci)7924f3e17a8SBarry Smith PetscErrorCode MatMFFDSetFunctioni(Mat mat, MatMFFDiFn *funci)
793d71ae5a4SJacob Faibussowitsch {
794e884886fSBarry Smith PetscFunctionBegin;
7950700a824SBarry Smith PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
7964f3e17a8SBarry Smith PetscTryMethod(mat, "MatMFFDSetFunctioni_C", (Mat, MatMFFDiFn *), (mat, funci));
7973ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
798e884886fSBarry Smith }
799e884886fSBarry Smith
800e884886fSBarry Smith /*@C
8014f3e17a8SBarry Smith MatMFFDSetFunctioniBase - Sets the function to compute the base vector for a single component function evaluation for a `MATMFFD` matrix
802e884886fSBarry Smith
803c3339decSBarry Smith Logically Collective
804e884886fSBarry Smith
805e884886fSBarry Smith Input Parameters:
80601c1178eSBarry Smith + mat - the `MATMFFD` matrix-free matrix
807e884886fSBarry Smith - func - the function to use
808e884886fSBarry Smith
809e884886fSBarry Smith Level: advanced
810e884886fSBarry Smith
811e884886fSBarry Smith Notes:
81201c1178eSBarry Smith If you use this you MUST call `MatAssemblyBegin()` and `MatAssemblyEnd()` on the matrix-free
81394eb4328SStefano Zampini matrix inside your compute Jacobian routine.
814e884886fSBarry Smith
81511a5261eSBarry Smith This function is necessary to compute the diagonal of the matrix, used for example with `PCJACOBI`
81611a5261eSBarry Smith
817fe59aa6dSJacob Faibussowitsch .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatCreateSNESMF()`, `MatMFFDGetH()`, `MatCreateMFFD()`,
81854c05997SPierre Jolivet `MatMFFDSetHHistory()`, `MatMFFDResetHHistory()`, `SNESSetFunction()`, `MatGetDiagonal()`
819e884886fSBarry Smith @*/
MatMFFDSetFunctioniBase(Mat mat,MatMFFDiBaseFn * func)8204f3e17a8SBarry Smith PetscErrorCode MatMFFDSetFunctioniBase(Mat mat, MatMFFDiBaseFn *func)
821d71ae5a4SJacob Faibussowitsch {
822e884886fSBarry Smith PetscFunctionBegin;
8230700a824SBarry Smith PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
8244f3e17a8SBarry Smith PetscTryMethod(mat, "MatMFFDSetFunctioniBase_C", (Mat, MatMFFDiBaseFn *), (mat, func));
8253ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
826e884886fSBarry Smith }
827e884886fSBarry Smith
828e884886fSBarry Smith /*@
8294f3e17a8SBarry Smith MatMFFDSetPeriod - Sets how often the step-size `h` is recomputed for a `MATMFFD` matrix, by default it is every time
830e884886fSBarry Smith
831c3339decSBarry Smith Logically Collective
832e884886fSBarry Smith
833e884886fSBarry Smith Input Parameters:
83401c1178eSBarry Smith + mat - the `MATMFFD` matrix-free matrix
835e884886fSBarry Smith - period - 1 for every time, 2 for every second etc
836e884886fSBarry Smith
8372ef1f0ffSBarry Smith Options Database Key:
8382ef1f0ffSBarry Smith . -mat_mffd_period <period> - Sets how often `h` is recomputed
839e884886fSBarry Smith
840e884886fSBarry Smith Level: advanced
841e884886fSBarry Smith
8421cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatCreateSNESMF()`, `MatMFFDGetH()`,
843db781477SPatrick Sanan `MatMFFDSetHHistory()`, `MatMFFDResetHHistory()`
844e884886fSBarry Smith @*/
MatMFFDSetPeriod(Mat mat,PetscInt period)845d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDSetPeriod(Mat mat, PetscInt period)
846d71ae5a4SJacob Faibussowitsch {
847e884886fSBarry Smith PetscFunctionBegin;
84888b4c220SStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
84988b4c220SStefano Zampini PetscValidLogicalCollectiveInt(mat, period, 2);
850cac4c232SBarry Smith PetscTryMethod(mat, "MatMFFDSetPeriod_C", (Mat, PetscInt), (mat, period));
8513ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
852e884886fSBarry Smith }
853e884886fSBarry Smith
854e884886fSBarry Smith /*@
85511a5261eSBarry Smith MatMFFDSetFunctionError - Sets the error_rel for the approximation of matrix-vector products using finite differences with the `MATMFFD` matrix
856e884886fSBarry Smith
857c3339decSBarry Smith Logically Collective
858e884886fSBarry Smith
859e884886fSBarry Smith Input Parameters:
86001c1178eSBarry Smith + mat - the `MATMFFD` matrix-free matrix
861fe59aa6dSJacob Faibussowitsch - error - relative error (should be set to the square root of the relative error in the function evaluations)
862e884886fSBarry Smith
8632ef1f0ffSBarry Smith Options Database Key:
864a2b725a8SWilliam Gropp . -mat_mffd_err <error_rel> - Sets error_rel
865e884886fSBarry Smith
866e884886fSBarry Smith Level: advanced
867e884886fSBarry Smith
86811a5261eSBarry Smith Note:
869e884886fSBarry Smith The default matrix-free matrix-vector product routine computes
870e884886fSBarry Smith .vb
871e884886fSBarry Smith F'(u)*a = [F(u+h*a) - F(u)]/h where
872e884886fSBarry Smith h = error_rel*u'a/||a||^2 if |u'a| > umin*||a||_{1}
873e884886fSBarry Smith = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2 else
874e884886fSBarry Smith .ve
875e884886fSBarry Smith
876fe59aa6dSJacob Faibussowitsch .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatCreateSNESMF()`, `MatMFFDGetH()`, `MatCreateMFFD()`,
877db781477SPatrick Sanan `MatMFFDSetHHistory()`, `MatMFFDResetHHistory()`
878e884886fSBarry Smith @*/
MatMFFDSetFunctionError(Mat mat,PetscReal error)879d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDSetFunctionError(Mat mat, PetscReal error)
880d71ae5a4SJacob Faibussowitsch {
881e884886fSBarry Smith PetscFunctionBegin;
88288b4c220SStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
88388b4c220SStefano Zampini PetscValidLogicalCollectiveReal(mat, error, 2);
884cac4c232SBarry Smith PetscTryMethod(mat, "MatMFFDSetFunctionError_C", (Mat, PetscReal), (mat, error));
8853ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
886e884886fSBarry Smith }
887e884886fSBarry Smith
888e884886fSBarry Smith /*@
889e884886fSBarry Smith MatMFFDSetHHistory - Sets an array to collect a history of the
89011a5261eSBarry Smith differencing values (h) computed for the matrix-free product `MATMFFD` matrix
891e884886fSBarry Smith
892c3339decSBarry Smith Logically Collective
893e884886fSBarry Smith
894e884886fSBarry Smith Input Parameters:
89511a5261eSBarry Smith + J - the `MATMFFD` matrix-free matrix
896a5b23f4aSJose E. Roman . history - space to hold the history
897e884886fSBarry Smith - nhistory - number of entries in history, if more entries are generated than
898e884886fSBarry Smith nhistory, then the later ones are discarded
899e884886fSBarry Smith
900e884886fSBarry Smith Level: advanced
901e884886fSBarry Smith
90211a5261eSBarry Smith Note:
90311a5261eSBarry Smith Use `MatMFFDResetHHistory()` to reset the history counter and collect
904e884886fSBarry Smith a new batch of differencing parameters, h.
905e884886fSBarry Smith
9061cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatMFFDGetH()`, `MatCreateSNESMF()`,
907db781477SPatrick Sanan `MatMFFDResetHHistory()`, `MatMFFDSetFunctionError()`
908e884886fSBarry Smith @*/
MatMFFDSetHHistory(Mat J,PetscScalar history[],PetscInt nhistory)909d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDSetHHistory(Mat J, PetscScalar history[], PetscInt nhistory)
910d71ae5a4SJacob Faibussowitsch {
911e884886fSBarry Smith PetscFunctionBegin;
91288b4c220SStefano Zampini PetscValidHeaderSpecific(J, MAT_CLASSID, 1);
9134f572ea9SToby Isaac if (history) PetscAssertPointer(history, 2);
91488b4c220SStefano Zampini PetscValidLogicalCollectiveInt(J, nhistory, 3);
915cac4c232SBarry Smith PetscUseMethod(J, "MatMFFDSetHHistory_C", (Mat, PetscScalar[], PetscInt), (J, history, nhistory));
9163ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
917e884886fSBarry Smith }
918e884886fSBarry Smith
919e884886fSBarry Smith /*@
920e884886fSBarry Smith MatMFFDResetHHistory - Resets the counter to zero to begin
92111a5261eSBarry Smith collecting a new set of differencing histories for the `MATMFFD` matrix
922e884886fSBarry Smith
923c3339decSBarry Smith Logically Collective
924e884886fSBarry Smith
9252fe279fdSBarry Smith Input Parameter:
926e884886fSBarry Smith . J - the matrix-free matrix context
927e884886fSBarry Smith
928e884886fSBarry Smith Level: advanced
929e884886fSBarry Smith
93011a5261eSBarry Smith Note:
93111a5261eSBarry Smith Use `MatMFFDSetHHistory()` to create the original history counter.
932e884886fSBarry Smith
9331cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatMFFDGetH()`, `MatCreateSNESMF()`,
934db781477SPatrick Sanan `MatMFFDSetHHistory()`, `MatMFFDSetFunctionError()`
935e884886fSBarry Smith @*/
MatMFFDResetHHistory(Mat J)936d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDResetHHistory(Mat J)
937d71ae5a4SJacob Faibussowitsch {
938e884886fSBarry Smith PetscFunctionBegin;
93988b4c220SStefano Zampini PetscValidHeaderSpecific(J, MAT_CLASSID, 1);
940cac4c232SBarry Smith PetscTryMethod(J, "MatMFFDResetHHistory_C", (Mat), (J));
9413ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
942e884886fSBarry Smith }
943e884886fSBarry Smith
944487a658cSBarry Smith /*@
9452ef1f0ffSBarry Smith MatMFFDSetBase - Sets the vector `U` at which matrix vector products of the
94611a5261eSBarry Smith Jacobian are computed for the `MATMFFD` matrix
947e884886fSBarry Smith
948c3339decSBarry Smith Logically Collective
949e884886fSBarry Smith
950e884886fSBarry Smith Input Parameters:
95111a5261eSBarry Smith + J - the `MATMFFD` matrix
9523ec795f1SBarry Smith . U - the vector
953bcddec3dSBarry Smith - F - (optional) vector that contains F(u) if it has been already computed
954e884886fSBarry Smith
9552ef1f0ffSBarry Smith Level: advanced
9562ef1f0ffSBarry Smith
95795452b02SPatrick Sanan Notes:
95895452b02SPatrick Sanan This is rarely used directly
959e884886fSBarry Smith
9602ef1f0ffSBarry Smith If `F` is provided then it is not recomputed. Otherwise the function is evaluated at the base
96111a5261eSBarry Smith point during the first `MatMult()` after each call to `MatMFFDSetBase()`.
962dff2f722SBarry Smith
96342747ad1SJacob Faibussowitsch .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatMult()`
964e884886fSBarry Smith @*/
MatMFFDSetBase(Mat J,Vec U,Vec F)965d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDSetBase(Mat J, Vec U, Vec F)
966d71ae5a4SJacob Faibussowitsch {
967e884886fSBarry Smith PetscFunctionBegin;
9680700a824SBarry Smith PetscValidHeaderSpecific(J, MAT_CLASSID, 1);
9690700a824SBarry Smith PetscValidHeaderSpecific(U, VEC_CLASSID, 2);
9700700a824SBarry Smith if (F) PetscValidHeaderSpecific(F, VEC_CLASSID, 3);
971cac4c232SBarry Smith PetscTryMethod(J, "MatMFFDSetBase_C", (Mat, Vec, Vec), (J, U, F));
9723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
973e884886fSBarry Smith }
974e884886fSBarry Smith
975e884886fSBarry Smith /*@C
9764f3e17a8SBarry Smith MatMFFDSetCheckh - Sets a function that checks the computed `h` and adjusts
97711a5261eSBarry Smith it to satisfy some criteria for the `MATMFFD` matrix
978e884886fSBarry Smith
979c3339decSBarry Smith Logically Collective
980e884886fSBarry Smith
981e884886fSBarry Smith Input Parameters:
98211a5261eSBarry Smith + J - the `MATMFFD` matrix
9834f3e17a8SBarry Smith . fun - the function that checks `h`, see `MatMFFDCheckhFn`
984e884886fSBarry Smith - ctx - any context needed by the function
985e884886fSBarry Smith
986e884886fSBarry Smith Options Database Keys:
9874f3e17a8SBarry Smith . -mat_mffd_check_positivity <bool> - Ensure that $U + h*a $ is non-negative
988e884886fSBarry Smith
989e884886fSBarry Smith Level: advanced
990e884886fSBarry Smith
99195452b02SPatrick Sanan Notes:
9922ef1f0ffSBarry Smith For example, `MatMFFDCheckPositivity()` insures that all entries of U + h*a are non-negative
993e884886fSBarry Smith
9942ef1f0ffSBarry Smith The function you provide is called after the default `h` has been computed and allows you to
995755b7f64SBarry Smith modify it.
996755b7f64SBarry Smith
9974f3e17a8SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatMFFDCheckhFn`, `MatMFFDCheckPositivity()`
998e884886fSBarry Smith @*/
MatMFFDSetCheckh(Mat J,MatMFFDCheckhFn * fun,PetscCtx ctx)999*2a8381b2SBarry Smith PetscErrorCode MatMFFDSetCheckh(Mat J, MatMFFDCheckhFn *fun, PetscCtx ctx)
1000d71ae5a4SJacob Faibussowitsch {
1001e884886fSBarry Smith PetscFunctionBegin;
10020700a824SBarry Smith PetscValidHeaderSpecific(J, MAT_CLASSID, 1);
10034f3e17a8SBarry Smith PetscTryMethod(J, "MatMFFDSetCheckh_C", (Mat, MatMFFDCheckhFn *, void *), (J, fun, ctx));
10043ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
1005e884886fSBarry Smith }
1006e884886fSBarry Smith
1007e884886fSBarry Smith /*@
10084f3e17a8SBarry Smith MatMFFDCheckPositivity - Checks that all entries in $U + h*a $ are positive or
10094f3e17a8SBarry Smith zero, decreases `h` until this is satisfied for a `MATMFFD` matrix
1010e884886fSBarry Smith
1011c3339decSBarry Smith Logically Collective
1012e884886fSBarry Smith
1013e884886fSBarry Smith Input Parameters:
10144f3e17a8SBarry Smith + dummy - context variable (unused)
10154f3e17a8SBarry Smith . U - base vector that is added to
1016e884886fSBarry Smith . a - vector that is added
10174f3e17a8SBarry Smith - h - scaling factor on `a`, may be changed on output
1018e884886fSBarry Smith
1019e884886fSBarry Smith Options Database Keys:
10204f3e17a8SBarry Smith . -mat_mffd_check_positivity <bool> - Ensure that $U + h*a$ is nonnegative
1021e884886fSBarry Smith
1022e884886fSBarry Smith Level: advanced
1023e884886fSBarry Smith
102411a5261eSBarry Smith Note:
10252ef1f0ffSBarry Smith This is rarely used directly, rather it is passed as an argument to `MatMFFDSetCheckh()`
1026e884886fSBarry Smith
10271cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatMFFDSetCheckh()`
1028e884886fSBarry Smith @*/
MatMFFDCheckPositivity(void * dummy,Vec U,Vec a,PetscScalar * h)1029d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDCheckPositivity(void *dummy, Vec U, Vec a, PetscScalar *h)
1030d71ae5a4SJacob Faibussowitsch {
1031e884886fSBarry Smith PetscReal val, minval;
1032e884886fSBarry Smith PetscScalar *u_vec, *a_vec;
1033e884886fSBarry Smith PetscInt i, n;
1034e884886fSBarry Smith MPI_Comm comm;
1035e884886fSBarry Smith
1036e884886fSBarry Smith PetscFunctionBegin;
103788b4c220SStefano Zampini PetscValidHeaderSpecific(U, VEC_CLASSID, 2);
103888b4c220SStefano Zampini PetscValidHeaderSpecific(a, VEC_CLASSID, 3);
10394f572ea9SToby Isaac PetscAssertPointer(h, 4);
10409566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)U, &comm));
10419566063dSJacob Faibussowitsch PetscCall(VecGetArray(U, &u_vec));
10429566063dSJacob Faibussowitsch PetscCall(VecGetArray(a, &a_vec));
10439566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(U, &n));
1044c068d9bbSLisandro Dalcin minval = PetscAbsScalar(*h) * PetscRealConstant(1.01);
1045e884886fSBarry Smith for (i = 0; i < n; i++) {
1046e884886fSBarry Smith if (PetscRealPart(u_vec[i] + *h * a_vec[i]) <= 0.0) {
1047e884886fSBarry Smith val = PetscAbsScalar(u_vec[i] / a_vec[i]);
1048e884886fSBarry Smith if (val < minval) minval = val;
1049e884886fSBarry Smith }
1050e884886fSBarry Smith }
10519566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(U, &u_vec));
10529566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(a, &a_vec));
1053462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(&minval, &val, 1, MPIU_REAL, MPIU_MIN, comm));
1054e884886fSBarry Smith if (val <= PetscAbsScalar(*h)) {
1055835f2295SStefano Zampini val = 0.99 * val;
1056835f2295SStefano Zampini PetscCall(PetscInfo(U, "Scaling back h from %g to %g\n", (double)PetscRealPart(*h), (double)val));
1057835f2295SStefano Zampini if (PetscRealPart(*h) > 0.0) *h = val;
1058835f2295SStefano Zampini else *h = -val;
1059e884886fSBarry Smith }
10603ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
1061e884886fSBarry Smith }
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