1a1f56445SPierre Jolivet #include <../src/mat/impls/shell/shell.h> /*I "petscmat.h" I*/ 2a1f56445SPierre Jolivet #include <../src/mat/impls/mffd/mffdimpl.h> 3e884886fSBarry Smith 4f4259b30SLisandro Dalcin PetscFunctionList MatMFFDList = NULL; 5ace3abfcSBarry Smith PetscBool MatMFFDRegisterAllCalled = PETSC_FALSE; 6e884886fSBarry Smith 77087cfbeSBarry Smith PetscClassId MATMFFD_CLASSID; 8166c7f25SBarry Smith PetscLogEvent MATMFFD_Mult; 9e884886fSBarry Smith 10ace3abfcSBarry Smith static PetscBool MatMFFDPackageInitialized = PETSC_FALSE; 1166976f2fSJacob Faibussowitsch 12b022a5c1SBarry Smith /*@C 1311a5261eSBarry Smith MatMFFDFinalizePackage - This function destroys everything in the MATMFFD` package. It is 1411a5261eSBarry Smith called from `PetscFinalize()`. 15b022a5c1SBarry Smith 16b022a5c1SBarry Smith Level: developer 17b022a5c1SBarry Smith 181cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `PetscFinalize()`, `MatCreateMFFD()`, `MatCreateSNESMF()` 19b022a5c1SBarry Smith @*/ 20d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDFinalizePackage(void) 21d71ae5a4SJacob Faibussowitsch { 22b022a5c1SBarry Smith PetscFunctionBegin; 239566063dSJacob Faibussowitsch PetscCall(PetscFunctionListDestroy(&MatMFFDList)); 24b022a5c1SBarry Smith MatMFFDPackageInitialized = PETSC_FALSE; 25b022a5c1SBarry Smith MatMFFDRegisterAllCalled = PETSC_FALSE; 263ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 27b022a5c1SBarry Smith } 28b022a5c1SBarry Smith 293ec795f1SBarry Smith /*@C 3011a5261eSBarry Smith MatMFFDInitializePackage - This function initializes everything in the MATMFFD` package. It is called 3111a5261eSBarry Smith from `MatInitializePackage()`. 323ec795f1SBarry Smith 333ec795f1SBarry Smith Level: developer 343ec795f1SBarry Smith 351cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `PetscInitialize()` 363ec795f1SBarry Smith @*/ 37d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDInitializePackage(void) 38d71ae5a4SJacob Faibussowitsch { 393ec795f1SBarry Smith char logList[256]; 408e81d068SLisandro Dalcin PetscBool opt, pkg; 413ec795f1SBarry Smith 423ec795f1SBarry Smith PetscFunctionBegin; 433ba16761SJacob Faibussowitsch if (MatMFFDPackageInitialized) PetscFunctionReturn(PETSC_SUCCESS); 44b022a5c1SBarry Smith MatMFFDPackageInitialized = PETSC_TRUE; 453ec795f1SBarry Smith /* Register Classes */ 469566063dSJacob Faibussowitsch PetscCall(PetscClassIdRegister("MatMFFD", &MATMFFD_CLASSID)); 473ec795f1SBarry Smith /* Register Constructors */ 489566063dSJacob Faibussowitsch PetscCall(MatMFFDRegisterAll()); 493ec795f1SBarry Smith /* Register Events */ 509566063dSJacob Faibussowitsch PetscCall(PetscLogEventRegister("MatMult MF", MATMFFD_CLASSID, &MATMFFD_Mult)); 51e94e781bSJacob Faibussowitsch /* Process Info */ 52e94e781bSJacob Faibussowitsch { 53e94e781bSJacob Faibussowitsch PetscClassId classids[1]; 54e94e781bSJacob Faibussowitsch 55e94e781bSJacob Faibussowitsch classids[0] = MATMFFD_CLASSID; 569566063dSJacob Faibussowitsch PetscCall(PetscInfoProcessClass("matmffd", 1, classids)); 573ec795f1SBarry Smith } 583ec795f1SBarry Smith /* Process summary exclusions */ 599566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetString(NULL, NULL, "-log_exclude", logList, sizeof(logList), &opt)); 603ec795f1SBarry Smith if (opt) { 619566063dSJacob Faibussowitsch PetscCall(PetscStrInList("matmffd", logList, ',', &pkg)); 629566063dSJacob Faibussowitsch if (pkg) PetscCall(PetscLogEventExcludeClass(MATMFFD_CLASSID)); 633ec795f1SBarry Smith } 648e81d068SLisandro Dalcin /* Register package finalizer */ 659566063dSJacob Faibussowitsch PetscCall(PetscRegisterFinalize(MatMFFDFinalizePackage)); 663ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 673ec795f1SBarry Smith } 683ec795f1SBarry Smith 69d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMFFDSetType_MFFD(Mat mat, MatMFFDType ftype) 70d71ae5a4SJacob Faibussowitsch { 71789d8953SBarry Smith MatMFFD ctx; 72789d8953SBarry Smith PetscBool match; 735f80ce2aSJacob Faibussowitsch PetscErrorCode (*r)(MatMFFD); 74789d8953SBarry Smith 75789d8953SBarry Smith PetscFunctionBegin; 76789d8953SBarry Smith PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 774f572ea9SToby Isaac PetscAssertPointer(ftype, 2); 789566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx)); 79789d8953SBarry Smith 80789d8953SBarry Smith /* already set, so just return */ 819566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)ctx, ftype, &match)); 823ba16761SJacob Faibussowitsch if (match) PetscFunctionReturn(PETSC_SUCCESS); 83789d8953SBarry Smith 84789d8953SBarry Smith /* destroy the old one if it exists */ 85dbbe0bcdSBarry Smith PetscTryTypeMethod(ctx, destroy); 86789d8953SBarry Smith 879566063dSJacob Faibussowitsch PetscCall(PetscFunctionListFind(MatMFFDList, ftype, &r)); 886adde796SStefano Zampini PetscCheck(r, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_UNKNOWN_TYPE, "Unknown MatMFFD type %s given", ftype); 899566063dSJacob Faibussowitsch PetscCall((*r)(ctx)); 909566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)ctx, ftype)); 913ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 92789d8953SBarry Smith } 93789d8953SBarry Smith 94cc4c1da9SBarry Smith /*@ 95e884886fSBarry Smith MatMFFDSetType - Sets the method that is used to compute the 96da81f932SPierre Jolivet differencing parameter for finite difference matrix-free formulations. 97e884886fSBarry Smith 98e884886fSBarry Smith Input Parameters: 9911a5261eSBarry Smith + mat - the "matrix-free" matrix created via `MatCreateSNESMF()`, or `MatCreateMFFD()` 10011a5261eSBarry Smith or `MatSetType`(mat,`MATMFFD`); 10111a5261eSBarry Smith - ftype - the type requested, either `MATMFFD_WP` or `MATMFFD_DS` 102e884886fSBarry Smith 103e884886fSBarry Smith Level: advanced 104e884886fSBarry Smith 10511a5261eSBarry Smith Note: 1062ef1f0ffSBarry Smith For example, such routines can compute `h` for use in 107e884886fSBarry Smith Jacobian-vector products of the form 1082ef1f0ffSBarry Smith .vb 109e884886fSBarry Smith 110e884886fSBarry Smith F(x+ha) - F(x) 111e884886fSBarry Smith F'(u)a ~= ---------------- 112e884886fSBarry Smith h 1132ef1f0ffSBarry Smith .ve 114e884886fSBarry Smith 1151cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MATMFFD_WP`, `MATMFFD_DS`, `MatCreateSNESMF()`, `MatMFFDRegister()`, `MatMFFDSetFunction()`, `MatCreateMFFD()` 116e884886fSBarry Smith @*/ 117d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDSetType(Mat mat, MatMFFDType ftype) 118d71ae5a4SJacob Faibussowitsch { 119e884886fSBarry Smith PetscFunctionBegin; 1200700a824SBarry Smith PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1214f572ea9SToby Isaac PetscAssertPointer(ftype, 2); 122cac4c232SBarry Smith PetscTryMethod(mat, "MatMFFDSetType_C", (Mat, MatMFFDType), (mat, ftype)); 1233ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 124e884886fSBarry Smith } 125e884886fSBarry Smith 1265d21e1f8SStefano Zampini static PetscErrorCode MatGetDiagonal_MFFD(Mat, Vec); 1275d21e1f8SStefano Zampini 128e884886fSBarry Smith typedef PetscErrorCode (*FCN1)(void *, Vec); /* force argument to next function to not be extern C*/ 129d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMFFDSetFunctioniBase_MFFD(Mat mat, FCN1 func) 130d71ae5a4SJacob Faibussowitsch { 131789d8953SBarry Smith MatMFFD ctx; 132e884886fSBarry Smith 133e884886fSBarry Smith PetscFunctionBegin; 1349566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx)); 135e884886fSBarry Smith ctx->funcisetbase = func; 1363ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 137e884886fSBarry Smith } 138e884886fSBarry Smith 139e884886fSBarry Smith typedef PetscErrorCode (*FCN2)(void *, PetscInt, Vec, PetscScalar *); /* force argument to next function to not be extern C*/ 140d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMFFDSetFunctioni_MFFD(Mat mat, FCN2 funci) 141d71ae5a4SJacob Faibussowitsch { 142789d8953SBarry Smith MatMFFD ctx; 143e884886fSBarry Smith 144e884886fSBarry Smith PetscFunctionBegin; 1459566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx)); 146e884886fSBarry Smith ctx->funci = funci; 1479566063dSJacob Faibussowitsch PetscCall(MatShellSetOperation(mat, MATOP_GET_DIAGONAL, (void (*)(void))MatGetDiagonal_MFFD)); 1483ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1495d21e1f8SStefano Zampini } 150789d8953SBarry Smith 151d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMFFDGetH_MFFD(Mat mat, PetscScalar *h) 152d71ae5a4SJacob Faibussowitsch { 153789d8953SBarry Smith MatMFFD ctx; 154789d8953SBarry Smith 155789d8953SBarry Smith PetscFunctionBegin; 1569566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx)); 157789d8953SBarry Smith *h = ctx->currenth; 1583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 159e884886fSBarry Smith } 160e884886fSBarry Smith 161d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMFFDResetHHistory_MFFD(Mat J) 162d71ae5a4SJacob Faibussowitsch { 163789d8953SBarry Smith MatMFFD ctx; 164bc0f08ceSBarry Smith 165bc0f08ceSBarry Smith PetscFunctionBegin; 1669566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(J, &ctx)); 167bc0f08ceSBarry Smith ctx->ncurrenth = 0; 1683ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 169bc0f08ceSBarry Smith } 170e884886fSBarry Smith 1711c84c290SBarry Smith /*@C 17220f4b53cSBarry Smith MatMFFDRegister - Adds a method to the `MATMFFD` registry. 1731c84c290SBarry Smith 174cc4c1da9SBarry Smith Not Collective, No Fortran Support 1751c84c290SBarry Smith 1761c84c290SBarry Smith Input Parameters: 17720f4b53cSBarry Smith + sname - name of a new user-defined compute-h module 17820f4b53cSBarry Smith - function - routine to create method context 1791c84c290SBarry Smith 1801c84c290SBarry Smith Level: developer 1811c84c290SBarry Smith 18211a5261eSBarry Smith Note: 18311a5261eSBarry Smith `MatMFFDRegister()` may be called multiple times to add several user-defined solvers. 1841c84c290SBarry Smith 185fe59aa6dSJacob Faibussowitsch Example Usage: 1861c84c290SBarry Smith .vb 187bdf89e91SBarry Smith MatMFFDRegister("my_h", MyHCreate); 1881c84c290SBarry Smith .ve 1891c84c290SBarry Smith 190a3b724e8SBarry Smith Then, your solver can be chosen with the procedural interface via `MatMFFDSetType`(mfctx, "my_h")` or at runtime via the option 191a3b724e8SBarry Smith `-mat_mffd_type my_h` 1921c84c290SBarry Smith 1931cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatMFFDRegisterAll()`, `MatMFFDRegisterDestroy()` 1941c84c290SBarry Smith @*/ 195d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDRegister(const char sname[], PetscErrorCode (*function)(MatMFFD)) 196d71ae5a4SJacob Faibussowitsch { 197e884886fSBarry Smith PetscFunctionBegin; 1989566063dSJacob Faibussowitsch PetscCall(MatInitializePackage()); 1999566063dSJacob Faibussowitsch PetscCall(PetscFunctionListAdd(&MatMFFDList, sname, function)); 2003ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 201e884886fSBarry Smith } 202e884886fSBarry Smith 203d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDestroy_MFFD(Mat mat) 204d71ae5a4SJacob Faibussowitsch { 205789d8953SBarry Smith MatMFFD ctx; 206e884886fSBarry Smith 207e884886fSBarry Smith PetscFunctionBegin; 2089566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx)); 2099566063dSJacob Faibussowitsch PetscCall(VecDestroy(&ctx->w)); 2109566063dSJacob Faibussowitsch PetscCall(VecDestroy(&ctx->current_u)); 21148a46eb9SPierre Jolivet if (ctx->current_f_allocated) PetscCall(VecDestroy(&ctx->current_f)); 212dbbe0bcdSBarry Smith PetscTryTypeMethod(ctx, destroy); 2139566063dSJacob Faibussowitsch PetscCall(PetscHeaderDestroy(&ctx)); 214e884886fSBarry Smith 2159566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDSetBase_C", NULL)); 2169566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDSetFunctioniBase_C", NULL)); 2179566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDSetFunctioni_C", NULL)); 2189566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDSetFunction_C", NULL)); 2199566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDSetFunctionError_C", NULL)); 2209566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDSetCheckh_C", NULL)); 2219566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDSetPeriod_C", NULL)); 2229566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDResetHHistory_C", NULL)); 2239566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDSetHHistory_C", NULL)); 2249566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDSetType_C", NULL)); 2259566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMFFDGetH_C", NULL)); 2262e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatSNESMFSetReuseBase_C", NULL)); 2272e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatSNESMFGetReuseBase_C", NULL)); 228ee912ba9SBarry Smith PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatShellSetContext_C", NULL)); 2293ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 230e884886fSBarry Smith } 231e884886fSBarry Smith 232e884886fSBarry Smith /* 233e884886fSBarry Smith MatMFFDView_MFFD - Views matrix-free parameters. 234e884886fSBarry Smith 235e884886fSBarry Smith */ 236d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatView_MFFD(Mat J, PetscViewer viewer) 237d71ae5a4SJacob Faibussowitsch { 238789d8953SBarry Smith MatMFFD ctx; 239a283635eSDmitry Karpeev PetscBool iascii, viewbase, viewfunction; 240a283635eSDmitry Karpeev const char *prefix; 241e884886fSBarry Smith 242e884886fSBarry Smith PetscFunctionBegin; 2439566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(J, &ctx)); 2449566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 245e884886fSBarry Smith if (iascii) { 2469566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Matrix-free approximation:\n")); 2479566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushTab(viewer)); 2489566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "err=%g (relative error in function evaluation)\n", (double)ctx->error_rel)); 2497adad957SLisandro Dalcin if (!((PetscObject)ctx)->type_name) { 2509566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "The compute h routine has not yet been set\n")); 251e884886fSBarry Smith } else { 2529566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Using %s compute h routine\n", ((PetscObject)ctx)->type_name)); 253e884886fSBarry Smith } 254c92e3469SBarry Smith #if defined(PETSC_USE_COMPLEX) 25548a46eb9SPierre Jolivet if (ctx->usecomplex) PetscCall(PetscViewerASCIIPrintf(viewer, "Using Lyness complex number trick to compute the matrix-vector product\n")); 256c92e3469SBarry Smith #endif 257dbbe0bcdSBarry Smith PetscTryTypeMethod(ctx, view, viewer); 2589566063dSJacob Faibussowitsch PetscCall(PetscObjectGetOptionsPrefix((PetscObject)J, &prefix)); 259a283635eSDmitry Karpeev 2609566063dSJacob Faibussowitsch PetscCall(PetscOptionsHasName(((PetscObject)J)->options, prefix, "-mat_mffd_view_base", &viewbase)); 261a283635eSDmitry Karpeev if (viewbase) { 2629566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Base:\n")); 2639566063dSJacob Faibussowitsch PetscCall(VecView(ctx->current_u, viewer)); 264a283635eSDmitry Karpeev } 2659566063dSJacob Faibussowitsch PetscCall(PetscOptionsHasName(((PetscObject)J)->options, prefix, "-mat_mffd_view_function", &viewfunction)); 266a283635eSDmitry Karpeev if (viewfunction) { 2679566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Function:\n")); 2689566063dSJacob Faibussowitsch PetscCall(VecView(ctx->current_f, viewer)); 269a283635eSDmitry Karpeev } 2709566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopTab(viewer)); 27111aeaf0aSBarry Smith } 2723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 273e884886fSBarry Smith } 274e884886fSBarry Smith 275e884886fSBarry Smith /* 276e884886fSBarry Smith MatAssemblyEnd_MFFD - Resets the ctx->ncurrenth to zero. This 277e884886fSBarry Smith allows the user to indicate the beginning of a new linear solve by calling 27801c1178eSBarry Smith MatAssemblyXXX() on the matrix-free matrix. This then allows the 2791d0fab5eSBarry Smith MatCreateMFFD_WP() to properly compute ||U|| only the first time 280e884886fSBarry Smith in the linear solver rather than every time. 2815a576424SJed Brown 282cc2e6a90SBarry Smith This function is referenced directly from MatAssemblyEnd_SNESMF(), which may be in a different shared library hence 283cc2e6a90SBarry Smith it must be labeled as PETSC_EXTERN 284e884886fSBarry Smith */ 285d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MatAssemblyEnd_MFFD(Mat J, MatAssemblyType mt) 286d71ae5a4SJacob Faibussowitsch { 287789d8953SBarry Smith MatMFFD j; 288e884886fSBarry Smith 289e884886fSBarry Smith PetscFunctionBegin; 2909566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(J, &j)); 2919566063dSJacob Faibussowitsch PetscCall(MatMFFDResetHHistory(J)); 2923ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 293e884886fSBarry Smith } 294e884886fSBarry Smith 295e884886fSBarry Smith /* 296e884886fSBarry Smith MatMult_MFFD - Default matrix-free form for Jacobian-vector product, y = F'(u)*a: 297e884886fSBarry Smith 298e884886fSBarry Smith y ~= (F(u + ha) - F(u))/h, 299e884886fSBarry Smith where F = nonlinear function, as set by SNESSetFunction() 300e884886fSBarry Smith u = current iterate 301e884886fSBarry Smith h = difference interval 302e884886fSBarry Smith */ 303d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMult_MFFD(Mat mat, Vec a, Vec y) 304d71ae5a4SJacob Faibussowitsch { 305789d8953SBarry Smith MatMFFD ctx; 306e884886fSBarry Smith PetscScalar h; 307e884886fSBarry Smith Vec w, U, F; 308ace3abfcSBarry Smith PetscBool zeroa; 309e884886fSBarry Smith 310e884886fSBarry Smith PetscFunctionBegin; 3119566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx)); 31200045ab3SPierre Jolivet PetscCheck(ctx->current_u, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "MatMFFDSetBase() has not been called, this is often caused by forgetting to call MatAssemblyBegin/End on the first Mat in the SNES compute function"); 313e884886fSBarry Smith /* We log matrix-free matrix-vector products separately, so that we can 314e884886fSBarry Smith separate the performance monitoring from the cases that use conventional 315e884886fSBarry Smith storage. We may eventually modify event logging to associate events 316e884886fSBarry Smith with particular objects, hence alleviating the more general problem. */ 3179566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(MATMFFD_Mult, a, y, 0, 0)); 318e884886fSBarry Smith 319e884886fSBarry Smith w = ctx->w; 320e884886fSBarry Smith U = ctx->current_u; 3213ec795f1SBarry Smith F = ctx->current_f; 322e884886fSBarry Smith /* 323e884886fSBarry Smith Compute differencing parameter 324e884886fSBarry Smith */ 3254a2f8832SBarry Smith if (!((PetscObject)ctx)->type_name) { 3269566063dSJacob Faibussowitsch PetscCall(MatMFFDSetType(mat, MATMFFD_WP)); 3279566063dSJacob Faibussowitsch PetscCall(MatSetFromOptions(mat)); 328e884886fSBarry Smith } 329dbbe0bcdSBarry Smith PetscUseTypeMethod(ctx, compute, U, a, &h, &zeroa); 330e884886fSBarry Smith if (zeroa) { 3319566063dSJacob Faibussowitsch PetscCall(VecSet(y, 0.0)); 33285d14658SLisandro Dalcin PetscCall(PetscLogEventEnd(MATMFFD_Mult, a, y, 0, 0)); 3333ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 334e884886fSBarry Smith } 335e884886fSBarry Smith 33608401ef6SPierre Jolivet PetscCheck(!mat->erroriffailure || !PetscIsInfOrNanScalar(h), PETSC_COMM_SELF, PETSC_ERR_PLIB, "Computed Nan differencing parameter h"); 33748a46eb9SPierre Jolivet if (ctx->checkh) PetscCall((*ctx->checkh)(ctx->checkhctx, U, a, &h)); 338e884886fSBarry Smith 339e884886fSBarry Smith /* keep a record of the current differencing parameter h */ 340e884886fSBarry Smith ctx->currenth = h; 341e884886fSBarry Smith #if defined(PETSC_USE_COMPLEX) 3429566063dSJacob Faibussowitsch PetscCall(PetscInfo(mat, "Current differencing parameter: %g + %g i\n", (double)PetscRealPart(h), (double)PetscImaginaryPart(h))); 343e884886fSBarry Smith #else 3449566063dSJacob Faibussowitsch PetscCall(PetscInfo(mat, "Current differencing parameter: %15.12e\n", (double)PetscRealPart(h))); 345e884886fSBarry Smith #endif 346ad540459SPierre Jolivet if (ctx->historyh && ctx->ncurrenth < ctx->maxcurrenth) ctx->historyh[ctx->ncurrenth] = h; 347e884886fSBarry Smith ctx->ncurrenth++; 348e884886fSBarry Smith 349c92e3469SBarry Smith #if defined(PETSC_USE_COMPLEX) 350c92e3469SBarry Smith if (ctx->usecomplex) h = PETSC_i * h; 351c92e3469SBarry Smith #endif 352c92e3469SBarry Smith 353e884886fSBarry Smith /* w = u + ha */ 3549566063dSJacob Faibussowitsch PetscCall(VecWAXPY(w, h, a, U)); 355e884886fSBarry Smith 3561b797266SDmitry Karpeev /* compute func(U) as base for differencing; only needed first time in and not when provided by user */ 35748a46eb9SPierre Jolivet if (ctx->ncurrenth == 1 && ctx->current_f_allocated) PetscCall((*ctx->func)(ctx->funcctx, U, F)); 3589566063dSJacob Faibussowitsch PetscCall((*ctx->func)(ctx->funcctx, w, y)); 359e884886fSBarry Smith 360c92e3469SBarry Smith #if defined(PETSC_USE_COMPLEX) 361c92e3469SBarry Smith if (ctx->usecomplex) { 3629566063dSJacob Faibussowitsch PetscCall(VecImaginaryPart(y)); 363c92e3469SBarry Smith h = PetscImaginaryPart(h); 364c92e3469SBarry Smith } else { 3659566063dSJacob Faibussowitsch PetscCall(VecAXPY(y, -1.0, F)); 366c92e3469SBarry Smith } 367c92e3469SBarry Smith #else 3689566063dSJacob Faibussowitsch PetscCall(VecAXPY(y, -1.0, F)); 369c92e3469SBarry Smith #endif 3709566063dSJacob Faibussowitsch PetscCall(VecScale(y, 1.0 / h)); 3719566063dSJacob Faibussowitsch if (mat->nullsp) PetscCall(MatNullSpaceRemove(mat->nullsp, y)); 372e884886fSBarry Smith 3739566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(MATMFFD_Mult, a, y, 0, 0)); 3743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 375e884886fSBarry Smith } 376e884886fSBarry Smith 377e884886fSBarry Smith /* 37801c1178eSBarry Smith MatGetDiagonal_MFFD - Gets the diagonal for a matrix-free matrix 379e884886fSBarry Smith 380e884886fSBarry Smith y ~= (F(u + ha) - F(u))/h, 381e884886fSBarry Smith where F = nonlinear function, as set by SNESSetFunction() 382e884886fSBarry Smith u = current iterate 383e884886fSBarry Smith h = difference interval 384e884886fSBarry Smith */ 38566976f2fSJacob Faibussowitsch static PetscErrorCode MatGetDiagonal_MFFD(Mat mat, Vec a) 386d71ae5a4SJacob Faibussowitsch { 387789d8953SBarry Smith MatMFFD ctx; 388e884886fSBarry Smith PetscScalar h, *aa, *ww, v; 389e884886fSBarry Smith PetscReal epsilon = PETSC_SQRT_MACHINE_EPSILON, umin = 100.0 * PETSC_SQRT_MACHINE_EPSILON; 390e884886fSBarry Smith Vec w, U; 391e884886fSBarry Smith PetscInt i, rstart, rend; 392e884886fSBarry Smith 393e884886fSBarry Smith PetscFunctionBegin; 3949566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx)); 39528b400f6SJacob Faibussowitsch PetscCheck(ctx->func, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Requires calling MatMFFDSetFunction() first"); 39628b400f6SJacob Faibussowitsch PetscCheck(ctx->funci, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Requires calling MatMFFDSetFunctioni() first"); 397e884886fSBarry Smith w = ctx->w; 398e884886fSBarry Smith U = ctx->current_u; 3999566063dSJacob Faibussowitsch PetscCall((*ctx->func)(ctx->funcctx, U, a)); 4001baa6e33SBarry Smith if (ctx->funcisetbase) PetscCall((*ctx->funcisetbase)(ctx->funcctx, U)); 4019566063dSJacob Faibussowitsch PetscCall(VecCopy(U, w)); 402e884886fSBarry Smith 4039566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(a, &rstart, &rend)); 4049566063dSJacob Faibussowitsch PetscCall(VecGetArray(a, &aa)); 405e884886fSBarry Smith for (i = rstart; i < rend; i++) { 4069566063dSJacob Faibussowitsch PetscCall(VecGetArray(w, &ww)); 407e884886fSBarry Smith h = ww[i - rstart]; 408e884886fSBarry Smith if (h == 0.0) h = 1.0; 409e884886fSBarry Smith if (PetscAbsScalar(h) < umin && PetscRealPart(h) >= 0.0) h = umin; 410e884886fSBarry Smith else if (PetscRealPart(h) < 0.0 && PetscAbsScalar(h) < umin) h = -umin; 411e884886fSBarry Smith h *= epsilon; 412e884886fSBarry Smith 413e884886fSBarry Smith ww[i - rstart] += h; 4149566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(w, &ww)); 4159566063dSJacob Faibussowitsch PetscCall((*ctx->funci)(ctx->funcctx, i, w, &v)); 416e884886fSBarry Smith aa[i - rstart] = (v - aa[i - rstart]) / h; 417e884886fSBarry Smith 4189566063dSJacob Faibussowitsch PetscCall(VecGetArray(w, &ww)); 419e884886fSBarry Smith ww[i - rstart] -= h; 4209566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(w, &ww)); 421e884886fSBarry Smith } 4229566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(a, &aa)); 4233ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 424e884886fSBarry Smith } 425e884886fSBarry Smith 426d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MatMFFDSetBase_MFFD(Mat J, Vec U, Vec F) 427d71ae5a4SJacob Faibussowitsch { 428789d8953SBarry Smith MatMFFD ctx; 429e884886fSBarry Smith 430e884886fSBarry Smith PetscFunctionBegin; 4319566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(J, &ctx)); 4329566063dSJacob Faibussowitsch PetscCall(MatMFFDResetHHistory(J)); 433c51ad4d4SStefano Zampini if (!ctx->current_u) { 4349566063dSJacob Faibussowitsch PetscCall(VecDuplicate(U, &ctx->current_u)); 4359566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(ctx->current_u)); 436c51ad4d4SStefano Zampini } 4379566063dSJacob Faibussowitsch PetscCall(VecLockReadPop(ctx->current_u)); 4389566063dSJacob Faibussowitsch PetscCall(VecCopy(U, ctx->current_u)); 4399566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(ctx->current_u)); 44052121784SBarry Smith if (F) { 4419566063dSJacob Faibussowitsch if (ctx->current_f_allocated) PetscCall(VecDestroy(&ctx->current_f)); 4423ec795f1SBarry Smith ctx->current_f = F; 443cfe22f5eSBarry Smith ctx->current_f_allocated = PETSC_FALSE; 444cfe22f5eSBarry Smith } else if (!ctx->current_f_allocated) { 4459566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(J, NULL, &ctx->current_f)); 446cfe22f5eSBarry Smith ctx->current_f_allocated = PETSC_TRUE; 44752121784SBarry Smith } 44848a46eb9SPierre Jolivet if (!ctx->w) PetscCall(VecDuplicate(ctx->current_u, &ctx->w)); 449e884886fSBarry Smith J->assembled = PETSC_TRUE; 4503ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 451e884886fSBarry Smith } 4525a576424SJed Brown 453e884886fSBarry Smith typedef PetscErrorCode (*FCN3)(void *, Vec, Vec, PetscScalar *); /* force argument to next function to not be extern C*/ 454b2573a8aSBarry Smith 455d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMFFDSetCheckh_MFFD(Mat J, FCN3 fun, void *ectx) 456d71ae5a4SJacob Faibussowitsch { 457789d8953SBarry Smith MatMFFD ctx; 458e884886fSBarry Smith 459e884886fSBarry Smith PetscFunctionBegin; 4609566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(J, &ctx)); 461e884886fSBarry Smith ctx->checkh = fun; 462e884886fSBarry Smith ctx->checkhctx = ectx; 4633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 464e884886fSBarry Smith } 465e884886fSBarry Smith 466cc4c1da9SBarry Smith /*@ 4676aa9148fSLisandro Dalcin MatMFFDSetOptionsPrefix - Sets the prefix used for searching for all 46811a5261eSBarry Smith MATMFFD` options in the database. 4696aa9148fSLisandro Dalcin 470c3339decSBarry Smith Collective 4716aa9148fSLisandro Dalcin 472d8d19677SJose E. Roman Input Parameters: 473fe59aa6dSJacob Faibussowitsch + mat - the `MATMFFD` context 4746aa9148fSLisandro Dalcin - prefix - the prefix to prepend to all option names 4756aa9148fSLisandro Dalcin 47611a5261eSBarry Smith Note: 4776aa9148fSLisandro Dalcin A hyphen (-) must NOT be given at the beginning of the prefix name. 4786aa9148fSLisandro Dalcin The first character of all runtime options is AUTOMATICALLY the hyphen. 4796aa9148fSLisandro Dalcin 4806aa9148fSLisandro Dalcin Level: advanced 4816aa9148fSLisandro Dalcin 4821cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatSetFromOptions()`, `MatCreateSNESMF()`, `MatCreateMFFD()` 4836aa9148fSLisandro Dalcin @*/ 484d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDSetOptionsPrefix(Mat mat, const char prefix[]) 485d71ae5a4SJacob Faibussowitsch { 486789d8953SBarry Smith MatMFFD mfctx; 4875fd66863SKarl Rupp 4886aa9148fSLisandro Dalcin PetscFunctionBegin; 4890700a824SBarry Smith PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 4909566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &mfctx)); 4910700a824SBarry Smith PetscValidHeaderSpecific(mfctx, MATMFFD_CLASSID, 1); 4929566063dSJacob Faibussowitsch PetscCall(PetscObjectSetOptionsPrefix((PetscObject)mfctx, prefix)); 4933ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4946aa9148fSLisandro Dalcin } 4956aa9148fSLisandro Dalcin 496d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetFromOptions_MFFD(Mat mat, PetscOptionItems *PetscOptionsObject) 497d71ae5a4SJacob Faibussowitsch { 498789d8953SBarry Smith MatMFFD mfctx; 499ace3abfcSBarry Smith PetscBool flg; 500e884886fSBarry Smith char ftype[256]; 501e884886fSBarry Smith 502e884886fSBarry Smith PetscFunctionBegin; 5039566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &mfctx)); 504dbbe0bcdSBarry Smith PetscValidHeaderSpecific(mfctx, MATMFFD_CLASSID, 1); 505d0609cedSBarry Smith PetscObjectOptionsBegin((PetscObject)mfctx); 5069566063dSJacob Faibussowitsch PetscCall(PetscOptionsFList("-mat_mffd_type", "Matrix free type", "MatMFFDSetType", MatMFFDList, ((PetscObject)mfctx)->type_name, ftype, 256, &flg)); 5071baa6e33SBarry Smith if (flg) PetscCall(MatMFFDSetType(mat, ftype)); 508e884886fSBarry Smith 5099566063dSJacob Faibussowitsch PetscCall(PetscOptionsReal("-mat_mffd_err", "set sqrt relative error in function", "MatMFFDSetFunctionError", mfctx->error_rel, &mfctx->error_rel, NULL)); 5109566063dSJacob Faibussowitsch PetscCall(PetscOptionsInt("-mat_mffd_period", "how often h is recomputed", "MatMFFDSetPeriod", mfctx->recomputeperiod, &mfctx->recomputeperiod, NULL)); 511e884886fSBarry Smith 51290d69ab7SBarry Smith flg = PETSC_FALSE; 5139566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mat_mffd_check_positivity", "Insure that U + h*a is nonnegative", "MatMFFDSetCheckh", flg, &flg, NULL)); 5141baa6e33SBarry Smith if (flg) PetscCall(MatMFFDSetCheckh(mat, MatMFFDCheckPositivity, NULL)); 515c92e3469SBarry Smith #if defined(PETSC_USE_COMPLEX) 5169566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mat_mffd_complex", "Use Lyness complex number trick to compute the matrix-vector product", "None", mfctx->usecomplex, &mfctx->usecomplex, NULL)); 517c92e3469SBarry Smith #endif 518dbbe0bcdSBarry Smith PetscTryTypeMethod(mfctx, setfromoptions, PetscOptionsObject); 519d0609cedSBarry Smith PetscOptionsEnd(); 5203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 521e884886fSBarry Smith } 522e884886fSBarry Smith 523d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMFFDSetPeriod_MFFD(Mat mat, PetscInt period) 524d71ae5a4SJacob Faibussowitsch { 525789d8953SBarry Smith MatMFFD ctx; 526bc0f08ceSBarry Smith 527bc0f08ceSBarry Smith PetscFunctionBegin; 5289566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx)); 529bc0f08ceSBarry Smith ctx->recomputeperiod = period; 5303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 531bc0f08ceSBarry Smith } 532bc0f08ceSBarry Smith 533d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMFFDSetFunction_MFFD(Mat mat, PetscErrorCode (*func)(void *, Vec, Vec), void *funcctx) 534d71ae5a4SJacob Faibussowitsch { 535789d8953SBarry Smith MatMFFD ctx; 536bc0f08ceSBarry Smith 537bc0f08ceSBarry Smith PetscFunctionBegin; 5389566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx)); 539bc0f08ceSBarry Smith ctx->func = func; 540bc0f08ceSBarry Smith ctx->funcctx = funcctx; 5413ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 542bc0f08ceSBarry Smith } 543bc0f08ceSBarry Smith 544d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMFFDSetFunctionError_MFFD(Mat mat, PetscReal error) 545d71ae5a4SJacob Faibussowitsch { 54613bcc0bdSJacob Faibussowitsch PetscFunctionBegin; 54713bcc0bdSJacob Faibussowitsch if (error != (PetscReal)PETSC_DEFAULT) { 548789d8953SBarry Smith MatMFFD ctx; 549bc0f08ceSBarry Smith 5509566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(mat, &ctx)); 55113bcc0bdSJacob Faibussowitsch ctx->error_rel = error; 55213bcc0bdSJacob Faibussowitsch } 5533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 554bc0f08ceSBarry Smith } 555bc0f08ceSBarry Smith 55666976f2fSJacob Faibussowitsch static PetscErrorCode MatMFFDSetHHistory_MFFD(Mat J, PetscScalar history[], PetscInt nhistory) 557d71ae5a4SJacob Faibussowitsch { 558789d8953SBarry Smith MatMFFD ctx; 559789d8953SBarry Smith 5603b49f96aSBarry Smith PetscFunctionBegin; 5619566063dSJacob Faibussowitsch PetscCall(MatShellGetContext(J, &ctx)); 562789d8953SBarry Smith ctx->historyh = history; 563789d8953SBarry Smith ctx->maxcurrenth = nhistory; 564789d8953SBarry Smith ctx->currenth = 0.; 5653ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5663b49f96aSBarry Smith } 5673b49f96aSBarry Smith 568e884886fSBarry Smith /*MC 56901c1178eSBarry Smith MATMFFD - "mffd" - A matrix-free matrix type. 570e884886fSBarry Smith 571e884886fSBarry Smith Level: advanced 572e884886fSBarry Smith 573a1f56445SPierre Jolivet Developer Notes: 5742ef1f0ffSBarry Smith This is implemented on top of `MATSHELL` to get support for scaling and shifting without requiring duplicate code 575789d8953SBarry Smith 576ee912ba9SBarry Smith Users should not MatShell... operations on this class, there is some error checking for that incorrect usage 577ee912ba9SBarry Smith 5781cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreateMFFD()`, `MatCreateSNESMF()`, `MatMFFDSetFunction()`, `MatMFFDSetType()`, 579db781477SPatrick Sanan `MatMFFDSetFunctionError()`, `MatMFFDDSSetUmin()`, `MatMFFDSetFunction()` 580db781477SPatrick Sanan `MatMFFDSetHHistory()`, `MatMFFDResetHHistory()`, `MatCreateSNESMF()`, 581db781477SPatrick Sanan `MatMFFDGetH()`, 582e884886fSBarry Smith M*/ 583d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MatCreate_MFFD(Mat A) 584d71ae5a4SJacob Faibussowitsch { 585e884886fSBarry Smith MatMFFD mfctx; 586e884886fSBarry Smith 587e884886fSBarry Smith PetscFunctionBegin; 5889566063dSJacob Faibussowitsch PetscCall(MatMFFDInitializePackage()); 589e884886fSBarry Smith 5909566063dSJacob Faibussowitsch PetscCall(PetscHeaderCreate(mfctx, MATMFFD_CLASSID, "MatMFFD", "Matrix-free Finite Differencing", "Mat", PetscObjectComm((PetscObject)A), NULL, NULL)); 5912205254eSKarl Rupp 592e884886fSBarry Smith mfctx->error_rel = PETSC_SQRT_MACHINE_EPSILON; 593e884886fSBarry Smith mfctx->recomputeperiod = 1; 594e884886fSBarry Smith mfctx->count = 0; 595e884886fSBarry Smith mfctx->currenth = 0.0; 5960298fd71SBarry Smith mfctx->historyh = NULL; 597e884886fSBarry Smith mfctx->ncurrenth = 0; 598e884886fSBarry Smith mfctx->maxcurrenth = 0; 599f4259b30SLisandro Dalcin ((PetscObject)mfctx)->type_name = NULL; 600e884886fSBarry Smith 601e884886fSBarry Smith /* 602e884886fSBarry Smith Create the empty data structure to contain compute-h routines. 603e884886fSBarry Smith These will be filled in below from the command line options or 604e884886fSBarry Smith a later call with MatMFFDSetType() or if that is not called 605e884886fSBarry Smith then it will default in the first use of MatMult_MFFD() 606e884886fSBarry Smith */ 607f4259b30SLisandro Dalcin mfctx->ops->compute = NULL; 608f4259b30SLisandro Dalcin mfctx->ops->destroy = NULL; 609f4259b30SLisandro Dalcin mfctx->ops->view = NULL; 610f4259b30SLisandro Dalcin mfctx->ops->setfromoptions = NULL; 611f4259b30SLisandro Dalcin mfctx->hctx = NULL; 612e884886fSBarry Smith 613f4259b30SLisandro Dalcin mfctx->func = NULL; 614f4259b30SLisandro Dalcin mfctx->funcctx = NULL; 6150298fd71SBarry Smith mfctx->w = NULL; 616789d8953SBarry Smith mfctx->mat = A; 617e884886fSBarry Smith 6189566063dSJacob Faibussowitsch PetscCall(MatSetType(A, MATSHELL)); 6199566063dSJacob Faibussowitsch PetscCall(MatShellSetContext(A, mfctx)); 6209566063dSJacob Faibussowitsch PetscCall(MatShellSetOperation(A, MATOP_MULT, (void (*)(void))MatMult_MFFD)); 6219566063dSJacob Faibussowitsch PetscCall(MatShellSetOperation(A, MATOP_DESTROY, (void (*)(void))MatDestroy_MFFD)); 6229566063dSJacob Faibussowitsch PetscCall(MatShellSetOperation(A, MATOP_VIEW, (void (*)(void))MatView_MFFD)); 6239566063dSJacob Faibussowitsch PetscCall(MatShellSetOperation(A, MATOP_ASSEMBLY_END, (void (*)(void))MatAssemblyEnd_MFFD)); 6249566063dSJacob Faibussowitsch PetscCall(MatShellSetOperation(A, MATOP_SET_FROM_OPTIONS, (void (*)(void))MatSetFromOptions_MFFD)); 625a1f56445SPierre Jolivet PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatShellSetContext_C", MatShellSetContext_Immutable)); 626a1f56445SPierre Jolivet PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatShellSetContextDestroy_C", MatShellSetContextDestroy_Immutable)); 627a1f56445SPierre Jolivet PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatShellSetManageScalingShifts_C", MatShellSetManageScalingShifts_Immutable)); 628e884886fSBarry Smith 6299566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDSetBase_C", MatMFFDSetBase_MFFD)); 6309566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDSetFunctioniBase_C", MatMFFDSetFunctioniBase_MFFD)); 6319566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDSetFunctioni_C", MatMFFDSetFunctioni_MFFD)); 6329566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDSetFunction_C", MatMFFDSetFunction_MFFD)); 6339566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDSetCheckh_C", MatMFFDSetCheckh_MFFD)); 6349566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDSetPeriod_C", MatMFFDSetPeriod_MFFD)); 6359566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDSetFunctionError_C", MatMFFDSetFunctionError_MFFD)); 6369566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDResetHHistory_C", MatMFFDResetHHistory_MFFD)); 6379566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDSetHHistory_C", MatMFFDSetHHistory_MFFD)); 6389566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDSetType_C", MatMFFDSetType_MFFD)); 6399566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMFFDGetH_C", MatMFFDGetH_MFFD)); 6409566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)A, MATMFFD)); 6413ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 642e884886fSBarry Smith } 643e884886fSBarry Smith 644e884886fSBarry Smith /*@ 645*0b4b7b1cSBarry Smith MatCreateMFFD - Creates a matrix-free matrix of type `MATMFFD` that uses finite differences on a provided function to 646*0b4b7b1cSBarry Smith approximately multiply a vector by the matrix (Jacobian) . See also `MatCreateSNESMF()` 647e884886fSBarry Smith 64811a5261eSBarry Smith Collective 649e884886fSBarry Smith 650e884886fSBarry Smith Input Parameters: 651fef1beadSBarry Smith + comm - MPI communicator 6522ef1f0ffSBarry Smith . m - number of local rows (or `PETSC_DECIDE` to have calculated if `M` is given) 653fef1beadSBarry Smith This value should be the same as the local size used in creating the 654fef1beadSBarry Smith y vector for the matrix-vector product y = Ax. 655fef1beadSBarry Smith . n - This value should be the same as the local size used in creating the 65611a5261eSBarry Smith x vector for the matrix-vector product y = Ax. (or `PETSC_DECIDE` to have 6572ef1f0ffSBarry Smith calculated if `N` is given) For square matrices `n` is almost always `m`. 6582ef1f0ffSBarry Smith . M - number of global rows (or `PETSC_DETERMINE` to have calculated if `m` is given) 6592ef1f0ffSBarry Smith - N - number of global columns (or `PETSC_DETERMINE` to have calculated if `n` is given) 660fef1beadSBarry Smith 661e884886fSBarry Smith Output Parameter: 662e884886fSBarry Smith . J - the matrix-free matrix 663e884886fSBarry Smith 66411a5261eSBarry Smith Options Database Keys: 66511a5261eSBarry Smith + -mat_mffd_type - wp or ds (see `MATMFFD_WP` or `MATMFFD_DS`) 666c92e3469SBarry Smith . -mat_mffd_err - square root of estimated relative error in function evaluation 667c92e3469SBarry Smith . -mat_mffd_period - how often h is recomputed, defaults to 1, every time 6682ef1f0ffSBarry Smith . -mat_mffd_check_positivity - possibly decrease `h` until U + h*a has only positive values 66911a5261eSBarry Smith . -mat_mffd_umin <umin> - Sets umin (for default PETSc routine that computes h only) 670*0b4b7b1cSBarry Smith . -mat_mffd_complex - use the Lyness trick with complex numbers to compute the matrix-vector product instead of differencing 671c92e3469SBarry Smith (requires real valued functions but that PETSc be configured for complex numbers) 672*0b4b7b1cSBarry Smith . -snes_mf - use the finite difference based matrix-free matrix with `SNESSolve()` and no preconditioner 673*0b4b7b1cSBarry Smith - -snes_mf_operator - use the finite difference based matrix-free matrix with `SNESSolve()` but construct a preconditioner 674*0b4b7b1cSBarry Smith using the matrix passed as `pmat` to `SNESSetJacobian()`. 6759c6ac3b3SBarry Smith 676e884886fSBarry Smith Level: advanced 677e884886fSBarry Smith 678e884886fSBarry Smith Notes: 679*0b4b7b1cSBarry Smith Use `MatMFFDSetFunction()` to provide the function that will be differenced to compute the matrix-vector product. 680*0b4b7b1cSBarry Smith 681*0b4b7b1cSBarry Smith The matrix-free matrix context contains the function pointers 682e884886fSBarry Smith and work space for performing finite difference approximations of 683e884886fSBarry Smith Jacobian-vector products, F'(u)*a, 684e884886fSBarry Smith 685e884886fSBarry Smith The default code uses the following approach to compute h 686e884886fSBarry Smith 687e884886fSBarry Smith .vb 688e884886fSBarry Smith F'(u)*a = [F(u+h*a) - F(u)]/h where 689e884886fSBarry Smith h = error_rel*u'a/||a||^2 if |u'a| > umin*||a||_{1} 690e884886fSBarry Smith = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2 otherwise 691e884886fSBarry Smith where 692e884886fSBarry Smith error_rel = square root of relative error in function evaluation 693e884886fSBarry Smith umin = minimum iterate parameter 694e884886fSBarry Smith .ve 695e884886fSBarry Smith 696*0b4b7b1cSBarry Smith To have `SNES` use the matrix-free finite difference matrix-vector product and not provide a separate matrix 697*0b4b7b1cSBarry Smith from which to compute the preconditioner (the `pmat` argument `SNESSetJacobian()`), then simply call `SNESSetJacobian()` 698*0b4b7b1cSBarry Smith with `NULL` for the matrices and `MatMFFDComputeJacobian()`. Or use the options database option `-snes_mf` 699ca93e954SBarry Smith 700*0b4b7b1cSBarry Smith The user can set `error_rel` via `MatMFFDSetFunctionError()` and `umin` via `MatMFFDDSSetUmin()`. 701e884886fSBarry Smith 702*0b4b7b1cSBarry Smith Use `MATSHELL` or `MatCreateShell()` to provide your own custom matrix-vector operation. 703e884886fSBarry Smith 7041cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatDestroy()`, `MatMFFDSetFunctionError()`, `MatMFFDDSSetUmin()`, `MatMFFDSetFunction()` 705*0b4b7b1cSBarry Smith `MatMFFDSetHHistory()`, `MatMFFDResetHHistory()`, `MatCreateSNESMF()`, `MatCreateShell()`, `MATSHELL`, 706db781477SPatrick Sanan `MatMFFDGetH()`, `MatMFFDRegister()`, `MatMFFDComputeJacobian()` 707e884886fSBarry Smith @*/ 708d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateMFFD(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, Mat *J) 709d71ae5a4SJacob Faibussowitsch { 710e884886fSBarry Smith PetscFunctionBegin; 7119566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, J)); 7129566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*J, m, n, M, N)); 7139566063dSJacob Faibussowitsch PetscCall(MatSetType(*J, MATMFFD)); 7149566063dSJacob Faibussowitsch PetscCall(MatSetUp(*J)); 7153ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 716e884886fSBarry Smith } 717e884886fSBarry Smith 718e884886fSBarry Smith /*@ 71911a5261eSBarry Smith MatMFFDGetH - Gets the last value that was used as the differencing for a `MATMFFD` matrix 720e884886fSBarry Smith parameter. 721e884886fSBarry Smith 722e884886fSBarry Smith Not Collective 723e884886fSBarry Smith 724e884886fSBarry Smith Input Parameters: 72511a5261eSBarry Smith . mat - the `MATMFFD` matrix 726e884886fSBarry Smith 727fd292e60Sprj- Output Parameter: 728e884886fSBarry Smith . h - the differencing step size 729e884886fSBarry Smith 730e884886fSBarry Smith Level: advanced 731e884886fSBarry Smith 732fe59aa6dSJacob Faibussowitsch .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatCreateSNESMF()`, `MatMFFDSetHHistory()`, `MatCreateMFFD()`, `MatMFFDResetHHistory()` 733e884886fSBarry Smith @*/ 734d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDGetH(Mat mat, PetscScalar *h) 735d71ae5a4SJacob Faibussowitsch { 736e884886fSBarry Smith PetscFunctionBegin; 73788b4c220SStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 7384f572ea9SToby Isaac PetscAssertPointer(h, 2); 739cac4c232SBarry Smith PetscUseMethod(mat, "MatMFFDGetH_C", (Mat, PetscScalar *), (mat, h)); 7403ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 741e884886fSBarry Smith } 742e884886fSBarry Smith 743e884886fSBarry Smith /*@C 74401c1178eSBarry Smith MatMFFDSetFunction - Sets the function used in applying the matrix-free `MATMFFD` matrix. 745e884886fSBarry Smith 746c3339decSBarry Smith Logically Collective 747e884886fSBarry Smith 748e884886fSBarry Smith Input Parameters: 74901c1178eSBarry Smith + mat - the matrix-free matrix `MATMFFD` created via `MatCreateSNESMF()` or `MatCreateMFFD()` 750e884886fSBarry Smith . func - the function to use 751e884886fSBarry Smith - funcctx - optional function context passed to function 752e884886fSBarry Smith 7532920cce0SJacob Faibussowitsch Calling sequence of `func`: 75414f633e2SBarry Smith + funcctx - user provided context 75514f633e2SBarry Smith . x - input vector 75614f633e2SBarry Smith - f - computed output function 75714f633e2SBarry Smith 758e884886fSBarry Smith Level: advanced 759e884886fSBarry Smith 760e884886fSBarry Smith Notes: 76101c1178eSBarry Smith If you use this you MUST call `MatAssemblyBegin()` and `MatAssemblyEnd()` on the matrix-free 762e884886fSBarry Smith matrix inside your compute Jacobian routine 763e884886fSBarry Smith 76411a5261eSBarry Smith If this is not set then it will use the function set with `SNESSetFunction()` if `MatCreateSNESMF()` was used. 765e884886fSBarry Smith 766fe59aa6dSJacob Faibussowitsch .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatCreateSNESMF()`, `MatMFFDGetH()`, `MatCreateMFFD()`, 7672920cce0SJacob Faibussowitsch `MatMFFDSetHHistory()`, `MatMFFDResetHHistory()`, `SNESSetFunction()` 768e884886fSBarry Smith @*/ 7692920cce0SJacob Faibussowitsch PetscErrorCode MatMFFDSetFunction(Mat mat, PetscErrorCode (*func)(void *funcctx, Vec x, Vec f), void *funcctx) 770d71ae5a4SJacob Faibussowitsch { 771e884886fSBarry Smith PetscFunctionBegin; 77288b4c220SStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 773cac4c232SBarry Smith PetscTryMethod(mat, "MatMFFDSetFunction_C", (Mat, PetscErrorCode (*)(void *, Vec, Vec), void *), (mat, func, funcctx)); 7743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 775e884886fSBarry Smith } 776e884886fSBarry Smith 777e884886fSBarry Smith /*@C 77811a5261eSBarry Smith MatMFFDSetFunctioni - Sets the function for a single component for a `MATMFFD` matrix 779e884886fSBarry Smith 780c3339decSBarry Smith Logically Collective 781e884886fSBarry Smith 782e884886fSBarry Smith Input Parameters: 78301c1178eSBarry Smith + mat - the matrix-free matrix `MATMFFD` 784e884886fSBarry Smith - funci - the function to use 785e884886fSBarry Smith 786e884886fSBarry Smith Level: advanced 787e884886fSBarry Smith 788e884886fSBarry Smith Notes: 78901c1178eSBarry Smith If you use this you MUST call `MatAssemblyBegin()` and `MatAssemblyEnd()` on the matrix-free 79094eb4328SStefano Zampini matrix inside your compute Jacobian routine. 79111a5261eSBarry Smith 79294eb4328SStefano Zampini This function is necessary to compute the diagonal of the matrix. 793486afcceSStefano Zampini funci must not contain any MPI call as it is called inside a loop on the local portion of the vector. 794e884886fSBarry Smith 7951cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatCreateSNESMF()`, `MatMFFDGetH()`, `MatMFFDSetHHistory()`, `MatMFFDResetHHistory()`, `SNESetFunction()`, `MatGetDiagonal()` 796e884886fSBarry Smith @*/ 797d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDSetFunctioni(Mat mat, PetscErrorCode (*funci)(void *, PetscInt, Vec, PetscScalar *)) 798d71ae5a4SJacob Faibussowitsch { 799e884886fSBarry Smith PetscFunctionBegin; 8000700a824SBarry Smith PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 801cac4c232SBarry Smith PetscTryMethod(mat, "MatMFFDSetFunctioni_C", (Mat, PetscErrorCode (*)(void *, PetscInt, Vec, PetscScalar *)), (mat, funci)); 8023ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 803e884886fSBarry Smith } 804e884886fSBarry Smith 805e884886fSBarry Smith /*@C 80611a5261eSBarry Smith MatMFFDSetFunctioniBase - Sets the base vector for a single component function evaluation for a `MATMFFD` matrix 807e884886fSBarry Smith 808c3339decSBarry Smith Logically Collective 809e884886fSBarry Smith 810e884886fSBarry Smith Input Parameters: 81101c1178eSBarry Smith + mat - the `MATMFFD` matrix-free matrix 812e884886fSBarry Smith - func - the function to use 813e884886fSBarry Smith 814e884886fSBarry Smith Level: advanced 815e884886fSBarry Smith 816e884886fSBarry Smith Notes: 81701c1178eSBarry Smith If you use this you MUST call `MatAssemblyBegin()` and `MatAssemblyEnd()` on the matrix-free 81894eb4328SStefano Zampini matrix inside your compute Jacobian routine. 819e884886fSBarry Smith 82011a5261eSBarry Smith This function is necessary to compute the diagonal of the matrix, used for example with `PCJACOBI` 82111a5261eSBarry Smith 822fe59aa6dSJacob Faibussowitsch .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatCreateSNESMF()`, `MatMFFDGetH()`, `MatCreateMFFD()`, 823db781477SPatrick Sanan `MatMFFDSetHHistory()`, `MatMFFDResetHHistory()`, `SNESetFunction()`, `MatGetDiagonal()` 824e884886fSBarry Smith @*/ 825d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDSetFunctioniBase(Mat mat, PetscErrorCode (*func)(void *, Vec)) 826d71ae5a4SJacob Faibussowitsch { 827e884886fSBarry Smith PetscFunctionBegin; 8280700a824SBarry Smith PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 829cac4c232SBarry Smith PetscTryMethod(mat, "MatMFFDSetFunctioniBase_C", (Mat, PetscErrorCode (*)(void *, Vec)), (mat, func)); 8303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 831e884886fSBarry Smith } 832e884886fSBarry Smith 833e884886fSBarry Smith /*@ 83411a5261eSBarry Smith MatMFFDSetPeriod - Sets how often h is recomputed for a `MATMFFD` matrix, by default it is every time 835e884886fSBarry Smith 836c3339decSBarry Smith Logically Collective 837e884886fSBarry Smith 838e884886fSBarry Smith Input Parameters: 83901c1178eSBarry Smith + mat - the `MATMFFD` matrix-free matrix 840e884886fSBarry Smith - period - 1 for every time, 2 for every second etc 841e884886fSBarry Smith 8422ef1f0ffSBarry Smith Options Database Key: 8432ef1f0ffSBarry Smith . -mat_mffd_period <period> - Sets how often `h` is recomputed 844e884886fSBarry Smith 845e884886fSBarry Smith Level: advanced 846e884886fSBarry Smith 8471cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatCreateSNESMF()`, `MatMFFDGetH()`, 848db781477SPatrick Sanan `MatMFFDSetHHistory()`, `MatMFFDResetHHistory()` 849e884886fSBarry Smith @*/ 850d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDSetPeriod(Mat mat, PetscInt period) 851d71ae5a4SJacob Faibussowitsch { 852e884886fSBarry Smith PetscFunctionBegin; 85388b4c220SStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 85488b4c220SStefano Zampini PetscValidLogicalCollectiveInt(mat, period, 2); 855cac4c232SBarry Smith PetscTryMethod(mat, "MatMFFDSetPeriod_C", (Mat, PetscInt), (mat, period)); 8563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 857e884886fSBarry Smith } 858e884886fSBarry Smith 859e884886fSBarry Smith /*@ 86011a5261eSBarry Smith MatMFFDSetFunctionError - Sets the error_rel for the approximation of matrix-vector products using finite differences with the `MATMFFD` matrix 861e884886fSBarry Smith 862c3339decSBarry Smith Logically Collective 863e884886fSBarry Smith 864e884886fSBarry Smith Input Parameters: 86501c1178eSBarry Smith + mat - the `MATMFFD` matrix-free matrix 866fe59aa6dSJacob Faibussowitsch - error - relative error (should be set to the square root of the relative error in the function evaluations) 867e884886fSBarry Smith 8682ef1f0ffSBarry Smith Options Database Key: 869a2b725a8SWilliam Gropp . -mat_mffd_err <error_rel> - Sets error_rel 870e884886fSBarry Smith 871e884886fSBarry Smith Level: advanced 872e884886fSBarry Smith 87311a5261eSBarry Smith Note: 874e884886fSBarry Smith The default matrix-free matrix-vector product routine computes 875e884886fSBarry Smith .vb 876e884886fSBarry Smith F'(u)*a = [F(u+h*a) - F(u)]/h where 877e884886fSBarry Smith h = error_rel*u'a/||a||^2 if |u'a| > umin*||a||_{1} 878e884886fSBarry Smith = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2 else 879e884886fSBarry Smith .ve 880e884886fSBarry Smith 881fe59aa6dSJacob Faibussowitsch .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatCreateSNESMF()`, `MatMFFDGetH()`, `MatCreateMFFD()`, 882db781477SPatrick Sanan `MatMFFDSetHHistory()`, `MatMFFDResetHHistory()` 883e884886fSBarry Smith @*/ 884d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDSetFunctionError(Mat mat, PetscReal error) 885d71ae5a4SJacob Faibussowitsch { 886e884886fSBarry Smith PetscFunctionBegin; 88788b4c220SStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 88888b4c220SStefano Zampini PetscValidLogicalCollectiveReal(mat, error, 2); 889cac4c232SBarry Smith PetscTryMethod(mat, "MatMFFDSetFunctionError_C", (Mat, PetscReal), (mat, error)); 8903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 891e884886fSBarry Smith } 892e884886fSBarry Smith 893e884886fSBarry Smith /*@ 894e884886fSBarry Smith MatMFFDSetHHistory - Sets an array to collect a history of the 89511a5261eSBarry Smith differencing values (h) computed for the matrix-free product `MATMFFD` matrix 896e884886fSBarry Smith 897c3339decSBarry Smith Logically Collective 898e884886fSBarry Smith 899e884886fSBarry Smith Input Parameters: 90011a5261eSBarry Smith + J - the `MATMFFD` matrix-free matrix 901a5b23f4aSJose E. Roman . history - space to hold the history 902e884886fSBarry Smith - nhistory - number of entries in history, if more entries are generated than 903e884886fSBarry Smith nhistory, then the later ones are discarded 904e884886fSBarry Smith 905e884886fSBarry Smith Level: advanced 906e884886fSBarry Smith 90711a5261eSBarry Smith Note: 90811a5261eSBarry Smith Use `MatMFFDResetHHistory()` to reset the history counter and collect 909e884886fSBarry Smith a new batch of differencing parameters, h. 910e884886fSBarry Smith 9111cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatMFFDGetH()`, `MatCreateSNESMF()`, 912db781477SPatrick Sanan `MatMFFDResetHHistory()`, `MatMFFDSetFunctionError()` 913e884886fSBarry Smith @*/ 914d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDSetHHistory(Mat J, PetscScalar history[], PetscInt nhistory) 915d71ae5a4SJacob Faibussowitsch { 916e884886fSBarry Smith PetscFunctionBegin; 91788b4c220SStefano Zampini PetscValidHeaderSpecific(J, MAT_CLASSID, 1); 9184f572ea9SToby Isaac if (history) PetscAssertPointer(history, 2); 91988b4c220SStefano Zampini PetscValidLogicalCollectiveInt(J, nhistory, 3); 920cac4c232SBarry Smith PetscUseMethod(J, "MatMFFDSetHHistory_C", (Mat, PetscScalar[], PetscInt), (J, history, nhistory)); 9213ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 922e884886fSBarry Smith } 923e884886fSBarry Smith 924e884886fSBarry Smith /*@ 925e884886fSBarry Smith MatMFFDResetHHistory - Resets the counter to zero to begin 92611a5261eSBarry Smith collecting a new set of differencing histories for the `MATMFFD` matrix 927e884886fSBarry Smith 928c3339decSBarry Smith Logically Collective 929e884886fSBarry Smith 9302fe279fdSBarry Smith Input Parameter: 931e884886fSBarry Smith . J - the matrix-free matrix context 932e884886fSBarry Smith 933e884886fSBarry Smith Level: advanced 934e884886fSBarry Smith 93511a5261eSBarry Smith Note: 93611a5261eSBarry Smith Use `MatMFFDSetHHistory()` to create the original history counter. 937e884886fSBarry Smith 9381cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatMFFDGetH()`, `MatCreateSNESMF()`, 939db781477SPatrick Sanan `MatMFFDSetHHistory()`, `MatMFFDSetFunctionError()` 940e884886fSBarry Smith @*/ 941d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDResetHHistory(Mat J) 942d71ae5a4SJacob Faibussowitsch { 943e884886fSBarry Smith PetscFunctionBegin; 94488b4c220SStefano Zampini PetscValidHeaderSpecific(J, MAT_CLASSID, 1); 945cac4c232SBarry Smith PetscTryMethod(J, "MatMFFDResetHHistory_C", (Mat), (J)); 9463ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 947e884886fSBarry Smith } 948e884886fSBarry Smith 949487a658cSBarry Smith /*@ 9502ef1f0ffSBarry Smith MatMFFDSetBase - Sets the vector `U` at which matrix vector products of the 95111a5261eSBarry Smith Jacobian are computed for the `MATMFFD` matrix 952e884886fSBarry Smith 953c3339decSBarry Smith Logically Collective 954e884886fSBarry Smith 955e884886fSBarry Smith Input Parameters: 95611a5261eSBarry Smith + J - the `MATMFFD` matrix 9573ec795f1SBarry Smith . U - the vector 958bcddec3dSBarry Smith - F - (optional) vector that contains F(u) if it has been already computed 959e884886fSBarry Smith 9602ef1f0ffSBarry Smith Level: advanced 9612ef1f0ffSBarry Smith 96295452b02SPatrick Sanan Notes: 96395452b02SPatrick Sanan This is rarely used directly 964e884886fSBarry Smith 9652ef1f0ffSBarry Smith If `F` is provided then it is not recomputed. Otherwise the function is evaluated at the base 96611a5261eSBarry Smith point during the first `MatMult()` after each call to `MatMFFDSetBase()`. 967dff2f722SBarry Smith 96842747ad1SJacob Faibussowitsch .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatMult()` 969e884886fSBarry Smith @*/ 970d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDSetBase(Mat J, Vec U, Vec F) 971d71ae5a4SJacob Faibussowitsch { 972e884886fSBarry Smith PetscFunctionBegin; 9730700a824SBarry Smith PetscValidHeaderSpecific(J, MAT_CLASSID, 1); 9740700a824SBarry Smith PetscValidHeaderSpecific(U, VEC_CLASSID, 2); 9750700a824SBarry Smith if (F) PetscValidHeaderSpecific(F, VEC_CLASSID, 3); 976cac4c232SBarry Smith PetscTryMethod(J, "MatMFFDSetBase_C", (Mat, Vec, Vec), (J, U, F)); 9773ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 978e884886fSBarry Smith } 979e884886fSBarry Smith 980e884886fSBarry Smith /*@C 981e884886fSBarry Smith MatMFFDSetCheckh - Sets a function that checks the computed h and adjusts 98211a5261eSBarry Smith it to satisfy some criteria for the `MATMFFD` matrix 983e884886fSBarry Smith 984c3339decSBarry Smith Logically Collective 985e884886fSBarry Smith 986e884886fSBarry Smith Input Parameters: 98711a5261eSBarry Smith + J - the `MATMFFD` matrix 9882ef1f0ffSBarry Smith . fun - the function that checks `h` 989e884886fSBarry Smith - ctx - any context needed by the function 990e884886fSBarry Smith 991e884886fSBarry Smith Options Database Keys: 99267b8a455SSatish Balay . -mat_mffd_check_positivity <bool> - Insure that U + h*a is non-negative 993e884886fSBarry Smith 994e884886fSBarry Smith Level: advanced 995e884886fSBarry Smith 99695452b02SPatrick Sanan Notes: 9972ef1f0ffSBarry Smith For example, `MatMFFDCheckPositivity()` insures that all entries of U + h*a are non-negative 998e884886fSBarry Smith 9992ef1f0ffSBarry Smith The function you provide is called after the default `h` has been computed and allows you to 1000755b7f64SBarry Smith modify it. 1001755b7f64SBarry Smith 10021cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatMFFDCheckPositivity()` 1003e884886fSBarry Smith @*/ 1004d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDSetCheckh(Mat J, PetscErrorCode (*fun)(void *, Vec, Vec, PetscScalar *), void *ctx) 1005d71ae5a4SJacob Faibussowitsch { 1006e884886fSBarry Smith PetscFunctionBegin; 10070700a824SBarry Smith PetscValidHeaderSpecific(J, MAT_CLASSID, 1); 1008cac4c232SBarry Smith PetscTryMethod(J, "MatMFFDSetCheckh_C", (Mat, PetscErrorCode (*)(void *, Vec, Vec, PetscScalar *), void *), (J, fun, ctx)); 10093ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1010e884886fSBarry Smith } 1011e884886fSBarry Smith 1012e884886fSBarry Smith /*@ 1013e884886fSBarry Smith MatMFFDCheckPositivity - Checks that all entries in U + h*a are positive or 101411a5261eSBarry Smith zero, decreases h until this is satisfied for a `MATMFFD` matrix 1015e884886fSBarry Smith 1016c3339decSBarry Smith Logically Collective 1017e884886fSBarry Smith 1018e884886fSBarry Smith Input Parameters: 1019e884886fSBarry Smith + U - base vector that is added to 1020e884886fSBarry Smith . a - vector that is added 1021e884886fSBarry Smith . h - scaling factor on a 1022e884886fSBarry Smith - dummy - context variable (unused) 1023e884886fSBarry Smith 1024e884886fSBarry Smith Options Database Keys: 102567b8a455SSatish Balay . -mat_mffd_check_positivity <bool> - Insure that U + h*a is nonnegative 1026e884886fSBarry Smith 1027e884886fSBarry Smith Level: advanced 1028e884886fSBarry Smith 102911a5261eSBarry Smith Note: 10302ef1f0ffSBarry Smith This is rarely used directly, rather it is passed as an argument to `MatMFFDSetCheckh()` 1031e884886fSBarry Smith 10321cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMFFD`, `MatMFFDSetCheckh()` 1033e884886fSBarry Smith @*/ 1034d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMFFDCheckPositivity(void *dummy, Vec U, Vec a, PetscScalar *h) 1035d71ae5a4SJacob Faibussowitsch { 1036e884886fSBarry Smith PetscReal val, minval; 1037e884886fSBarry Smith PetscScalar *u_vec, *a_vec; 1038e884886fSBarry Smith PetscInt i, n; 1039e884886fSBarry Smith MPI_Comm comm; 1040e884886fSBarry Smith 1041e884886fSBarry Smith PetscFunctionBegin; 104288b4c220SStefano Zampini PetscValidHeaderSpecific(U, VEC_CLASSID, 2); 104388b4c220SStefano Zampini PetscValidHeaderSpecific(a, VEC_CLASSID, 3); 10444f572ea9SToby Isaac PetscAssertPointer(h, 4); 10459566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)U, &comm)); 10469566063dSJacob Faibussowitsch PetscCall(VecGetArray(U, &u_vec)); 10479566063dSJacob Faibussowitsch PetscCall(VecGetArray(a, &a_vec)); 10489566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(U, &n)); 1049c068d9bbSLisandro Dalcin minval = PetscAbsScalar(*h) * PetscRealConstant(1.01); 1050e884886fSBarry Smith for (i = 0; i < n; i++) { 1051e884886fSBarry Smith if (PetscRealPart(u_vec[i] + *h * a_vec[i]) <= 0.0) { 1052e884886fSBarry Smith val = PetscAbsScalar(u_vec[i] / a_vec[i]); 1053e884886fSBarry Smith if (val < minval) minval = val; 1054e884886fSBarry Smith } 1055e884886fSBarry Smith } 10569566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(U, &u_vec)); 10579566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(a, &a_vec)); 1058462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(&minval, &val, 1, MPIU_REAL, MPIU_MIN, comm)); 1059e884886fSBarry Smith if (val <= PetscAbsScalar(*h)) { 10609566063dSJacob Faibussowitsch PetscCall(PetscInfo(U, "Scaling back h from %g to %g\n", (double)PetscRealPart(*h), (double)(.99 * val))); 1061e884886fSBarry Smith if (PetscRealPart(*h) > 0.0) *h = 0.99 * val; 1062e884886fSBarry Smith else *h = -0.99 * val; 1063e884886fSBarry Smith } 10643ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1065e884886fSBarry Smith } 1066