xref: /petsc/src/mat/interface/matrix.c (revision 7dcfde4d07706b324bec70f4acb301e88d0e45fe)
1 /*
2    This is where the abstract matrix operations are defined
3    Portions of this code are under:
4    Copyright (c) 2022 Advanced Micro Devices, Inc. All rights reserved.
5 */
6 
7 #include <petsc/private/matimpl.h> /*I "petscmat.h" I*/
8 #include <petsc/private/isimpl.h>
9 #include <petsc/private/vecimpl.h>
10 
11 /* Logging support */
12 PetscClassId MAT_CLASSID;
13 PetscClassId MAT_COLORING_CLASSID;
14 PetscClassId MAT_FDCOLORING_CLASSID;
15 PetscClassId MAT_TRANSPOSECOLORING_CLASSID;
16 
17 PetscLogEvent MAT_Mult, MAT_MultAdd, MAT_MultTranspose;
18 PetscLogEvent MAT_MultTransposeAdd, MAT_Solve, MAT_Solves, MAT_SolveAdd, MAT_SolveTranspose, MAT_MatSolve, MAT_MatTrSolve;
19 PetscLogEvent MAT_SolveTransposeAdd, MAT_SOR, MAT_ForwardSolve, MAT_BackwardSolve, MAT_LUFactor, MAT_LUFactorSymbolic;
20 PetscLogEvent MAT_LUFactorNumeric, MAT_CholeskyFactor, MAT_CholeskyFactorSymbolic, MAT_CholeskyFactorNumeric, MAT_ILUFactor;
21 PetscLogEvent MAT_ILUFactorSymbolic, MAT_ICCFactorSymbolic, MAT_Copy, MAT_Convert, MAT_Scale, MAT_AssemblyBegin;
22 PetscLogEvent MAT_QRFactorNumeric, MAT_QRFactorSymbolic, MAT_QRFactor;
23 PetscLogEvent MAT_AssemblyEnd, MAT_SetValues, MAT_GetValues, MAT_GetRow, MAT_GetRowIJ, MAT_CreateSubMats, MAT_GetOrdering, MAT_RedundantMat, MAT_GetSeqNonzeroStructure;
24 PetscLogEvent MAT_IncreaseOverlap, MAT_Partitioning, MAT_PartitioningND, MAT_Coarsen, MAT_ZeroEntries, MAT_Load, MAT_View, MAT_AXPY, MAT_FDColoringCreate;
25 PetscLogEvent MAT_FDColoringSetUp, MAT_FDColoringApply, MAT_Transpose, MAT_FDColoringFunction, MAT_CreateSubMat;
26 PetscLogEvent MAT_TransposeColoringCreate;
27 PetscLogEvent MAT_MatMult, MAT_MatMultSymbolic, MAT_MatMultNumeric;
28 PetscLogEvent MAT_PtAP, MAT_PtAPSymbolic, MAT_PtAPNumeric, MAT_RARt, MAT_RARtSymbolic, MAT_RARtNumeric;
29 PetscLogEvent MAT_MatTransposeMult, MAT_MatTransposeMultSymbolic, MAT_MatTransposeMultNumeric;
30 PetscLogEvent MAT_TransposeMatMult, MAT_TransposeMatMultSymbolic, MAT_TransposeMatMultNumeric;
31 PetscLogEvent MAT_MatMatMult, MAT_MatMatMultSymbolic, MAT_MatMatMultNumeric;
32 PetscLogEvent MAT_MultHermitianTranspose, MAT_MultHermitianTransposeAdd;
33 PetscLogEvent MAT_Getsymtransreduced, MAT_GetBrowsOfAcols;
34 PetscLogEvent MAT_GetBrowsOfAocols, MAT_Getlocalmat, MAT_Getlocalmatcondensed, MAT_Seqstompi, MAT_Seqstompinum, MAT_Seqstompisym;
35 PetscLogEvent MAT_GetMultiProcBlock;
36 PetscLogEvent MAT_CUSPARSECopyToGPU, MAT_CUSPARSECopyFromGPU, MAT_CUSPARSEGenerateTranspose, MAT_CUSPARSESolveAnalysis;
37 PetscLogEvent MAT_HIPSPARSECopyToGPU, MAT_HIPSPARSECopyFromGPU, MAT_HIPSPARSEGenerateTranspose, MAT_HIPSPARSESolveAnalysis;
38 PetscLogEvent MAT_PreallCOO, MAT_SetVCOO;
39 PetscLogEvent MAT_CreateGraph;
40 PetscLogEvent MAT_SetValuesBatch;
41 PetscLogEvent MAT_ViennaCLCopyToGPU;
42 PetscLogEvent MAT_CUDACopyToGPU, MAT_HIPCopyToGPU;
43 PetscLogEvent MAT_DenseCopyToGPU, MAT_DenseCopyFromGPU;
44 PetscLogEvent MAT_Merge, MAT_Residual, MAT_SetRandom;
45 PetscLogEvent MAT_FactorFactS, MAT_FactorInvS;
46 PetscLogEvent MATCOLORING_Apply, MATCOLORING_Comm, MATCOLORING_Local, MATCOLORING_ISCreate, MATCOLORING_SetUp, MATCOLORING_Weights;
47 PetscLogEvent MAT_H2Opus_Build, MAT_H2Opus_Compress, MAT_H2Opus_Orthog, MAT_H2Opus_LR;
48 
49 const char *const MatFactorTypes[] = {"NONE", "LU", "CHOLESKY", "ILU", "ICC", "ILUDT", "QR", "MatFactorType", "MAT_FACTOR_", NULL};
50 
51 /*@
52   MatSetRandom - Sets all components of a matrix to random numbers.
53 
54   Logically Collective
55 
56   Input Parameters:
57 + x    - the matrix
58 - rctx - the `PetscRandom` object, formed by `PetscRandomCreate()`, or `NULL` and
59           it will create one internally.
60 
61   Example:
62 .vb
63      PetscRandomCreate(PETSC_COMM_WORLD,&rctx);
64      MatSetRandom(x,rctx);
65      PetscRandomDestroy(rctx);
66 .ve
67 
68   Level: intermediate
69 
70   Notes:
71   For sparse matrices that have been preallocated but not been assembled, it randomly selects appropriate locations,
72 
73   for sparse matrices that already have nonzero locations, it fills the locations with random numbers.
74 
75   It generates an error if used on unassembled sparse matrices that have not been preallocated.
76 
77 .seealso: [](ch_matrices), `Mat`, `PetscRandom`, `PetscRandomCreate()`, `MatZeroEntries()`, `MatSetValues()`, `PetscRandomDestroy()`
78 @*/
79 PetscErrorCode MatSetRandom(Mat x, PetscRandom rctx)
80 {
81   PetscRandom randObj = NULL;
82 
83   PetscFunctionBegin;
84   PetscValidHeaderSpecific(x, MAT_CLASSID, 1);
85   if (rctx) PetscValidHeaderSpecific(rctx, PETSC_RANDOM_CLASSID, 2);
86   PetscValidType(x, 1);
87   MatCheckPreallocated(x, 1);
88 
89   if (!rctx) {
90     MPI_Comm comm;
91     PetscCall(PetscObjectGetComm((PetscObject)x, &comm));
92     PetscCall(PetscRandomCreate(comm, &randObj));
93     PetscCall(PetscRandomSetType(randObj, x->defaultrandtype));
94     PetscCall(PetscRandomSetFromOptions(randObj));
95     rctx = randObj;
96   }
97   PetscCall(PetscLogEventBegin(MAT_SetRandom, x, rctx, 0, 0));
98   PetscUseTypeMethod(x, setrandom, rctx);
99   PetscCall(PetscLogEventEnd(MAT_SetRandom, x, rctx, 0, 0));
100 
101   PetscCall(MatAssemblyBegin(x, MAT_FINAL_ASSEMBLY));
102   PetscCall(MatAssemblyEnd(x, MAT_FINAL_ASSEMBLY));
103   PetscCall(PetscRandomDestroy(&randObj));
104   PetscFunctionReturn(PETSC_SUCCESS);
105 }
106 
107 /*@
108   MatFactorGetErrorZeroPivot - returns the pivot value that was determined to be zero and the row it occurred in
109 
110   Logically Collective
111 
112   Input Parameter:
113 . mat - the factored matrix
114 
115   Output Parameters:
116 + pivot - the pivot value computed
117 - row   - the row that the zero pivot occurred. This row value must be interpreted carefully due to row reorderings and which processes
118          the share the matrix
119 
120   Level: advanced
121 
122   Notes:
123   This routine does not work for factorizations done with external packages.
124 
125   This routine should only be called if `MatGetFactorError()` returns a value of `MAT_FACTOR_NUMERIC_ZEROPIVOT`
126 
127   This can also be called on non-factored matrices that come from, for example, matrices used in SOR.
128 
129 .seealso: [](ch_matrices), `Mat`, `MatZeroEntries()`, `MatFactor()`, `MatGetFactor()`,
130 `MatLUFactorSymbolic()`, `MatCholeskyFactorSymbolic()`, `MatFactorClearError()`,
131 `MAT_FACTOR_NUMERIC_ZEROPIVOT`
132 @*/
133 PetscErrorCode MatFactorGetErrorZeroPivot(Mat mat, PetscReal *pivot, PetscInt *row)
134 {
135   PetscFunctionBegin;
136   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
137   PetscAssertPointer(pivot, 2);
138   PetscAssertPointer(row, 3);
139   *pivot = mat->factorerror_zeropivot_value;
140   *row   = mat->factorerror_zeropivot_row;
141   PetscFunctionReturn(PETSC_SUCCESS);
142 }
143 
144 /*@
145   MatFactorGetError - gets the error code from a factorization
146 
147   Logically Collective
148 
149   Input Parameter:
150 . mat - the factored matrix
151 
152   Output Parameter:
153 . err - the error code
154 
155   Level: advanced
156 
157   Note:
158   This can also be called on non-factored matrices that come from, for example, matrices used in SOR.
159 
160 .seealso: [](ch_matrices), `Mat`, `MatZeroEntries()`, `MatFactor()`, `MatGetFactor()`, `MatLUFactorSymbolic()`, `MatCholeskyFactorSymbolic()`,
161           `MatFactorClearError()`, `MatFactorGetErrorZeroPivot()`, `MatFactorError`
162 @*/
163 PetscErrorCode MatFactorGetError(Mat mat, MatFactorError *err)
164 {
165   PetscFunctionBegin;
166   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
167   PetscAssertPointer(err, 2);
168   *err = mat->factorerrortype;
169   PetscFunctionReturn(PETSC_SUCCESS);
170 }
171 
172 /*@
173   MatFactorClearError - clears the error code in a factorization
174 
175   Logically Collective
176 
177   Input Parameter:
178 . mat - the factored matrix
179 
180   Level: developer
181 
182   Note:
183   This can also be called on non-factored matrices that come from, for example, matrices used in SOR.
184 
185 .seealso: [](ch_matrices), `Mat`, `MatZeroEntries()`, `MatFactor()`, `MatGetFactor()`, `MatLUFactorSymbolic()`, `MatCholeskyFactorSymbolic()`, `MatFactorGetError()`, `MatFactorGetErrorZeroPivot()`,
186           `MatGetErrorCode()`, `MatFactorError`
187 @*/
188 PetscErrorCode MatFactorClearError(Mat mat)
189 {
190   PetscFunctionBegin;
191   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
192   mat->factorerrortype             = MAT_FACTOR_NOERROR;
193   mat->factorerror_zeropivot_value = 0.0;
194   mat->factorerror_zeropivot_row   = 0;
195   PetscFunctionReturn(PETSC_SUCCESS);
196 }
197 
198 PetscErrorCode MatFindNonzeroRowsOrCols_Basic(Mat mat, PetscBool cols, PetscReal tol, IS *nonzero)
199 {
200   Vec                r, l;
201   const PetscScalar *al;
202   PetscInt           i, nz, gnz, N, n, st;
203 
204   PetscFunctionBegin;
205   PetscCall(MatCreateVecs(mat, &r, &l));
206   if (!cols) { /* nonzero rows */
207     PetscCall(MatGetOwnershipRange(mat, &st, NULL));
208     PetscCall(MatGetSize(mat, &N, NULL));
209     PetscCall(MatGetLocalSize(mat, &n, NULL));
210     PetscCall(VecSet(l, 0.0));
211     PetscCall(VecSetRandom(r, NULL));
212     PetscCall(MatMult(mat, r, l));
213     PetscCall(VecGetArrayRead(l, &al));
214   } else { /* nonzero columns */
215     PetscCall(MatGetOwnershipRangeColumn(mat, &st, NULL));
216     PetscCall(MatGetSize(mat, NULL, &N));
217     PetscCall(MatGetLocalSize(mat, NULL, &n));
218     PetscCall(VecSet(r, 0.0));
219     PetscCall(VecSetRandom(l, NULL));
220     PetscCall(MatMultTranspose(mat, l, r));
221     PetscCall(VecGetArrayRead(r, &al));
222   }
223   if (tol <= 0.0) {
224     for (i = 0, nz = 0; i < n; i++)
225       if (al[i] != 0.0) nz++;
226   } else {
227     for (i = 0, nz = 0; i < n; i++)
228       if (PetscAbsScalar(al[i]) > tol) nz++;
229   }
230   PetscCallMPI(MPIU_Allreduce(&nz, &gnz, 1, MPIU_INT, MPI_SUM, PetscObjectComm((PetscObject)mat)));
231   if (gnz != N) {
232     PetscInt *nzr;
233     PetscCall(PetscMalloc1(nz, &nzr));
234     if (nz) {
235       if (tol < 0) {
236         for (i = 0, nz = 0; i < n; i++)
237           if (al[i] != 0.0) nzr[nz++] = i + st;
238       } else {
239         for (i = 0, nz = 0; i < n; i++)
240           if (PetscAbsScalar(al[i]) > tol) nzr[nz++] = i + st;
241       }
242     }
243     PetscCall(ISCreateGeneral(PetscObjectComm((PetscObject)mat), nz, nzr, PETSC_OWN_POINTER, nonzero));
244   } else *nonzero = NULL;
245   if (!cols) { /* nonzero rows */
246     PetscCall(VecRestoreArrayRead(l, &al));
247   } else {
248     PetscCall(VecRestoreArrayRead(r, &al));
249   }
250   PetscCall(VecDestroy(&l));
251   PetscCall(VecDestroy(&r));
252   PetscFunctionReturn(PETSC_SUCCESS);
253 }
254 
255 /*@
256   MatFindNonzeroRows - Locate all rows that are not completely zero in the matrix
257 
258   Input Parameter:
259 . mat - the matrix
260 
261   Output Parameter:
262 . keptrows - the rows that are not completely zero
263 
264   Level: intermediate
265 
266   Note:
267   `keptrows` is set to `NULL` if all rows are nonzero.
268 
269   Developer Note:
270   If `keptrows` is not `NULL`, it must be sorted.
271 
272 .seealso: [](ch_matrices), `Mat`, `MatFindZeroRows()`
273  @*/
274 PetscErrorCode MatFindNonzeroRows(Mat mat, IS *keptrows)
275 {
276   PetscFunctionBegin;
277   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
278   PetscValidType(mat, 1);
279   PetscAssertPointer(keptrows, 2);
280   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
281   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
282   if (mat->ops->findnonzerorows) PetscUseTypeMethod(mat, findnonzerorows, keptrows);
283   else PetscCall(MatFindNonzeroRowsOrCols_Basic(mat, PETSC_FALSE, 0.0, keptrows));
284   if (keptrows && *keptrows) PetscCall(ISSetInfo(*keptrows, IS_SORTED, IS_GLOBAL, PETSC_FALSE, PETSC_TRUE));
285   PetscFunctionReturn(PETSC_SUCCESS);
286 }
287 
288 /*@
289   MatFindZeroRows - Locate all rows that are completely zero in the matrix
290 
291   Input Parameter:
292 . mat - the matrix
293 
294   Output Parameter:
295 . zerorows - the rows that are completely zero
296 
297   Level: intermediate
298 
299   Note:
300   `zerorows` is set to `NULL` if no rows are zero.
301 
302 .seealso: [](ch_matrices), `Mat`, `MatFindNonzeroRows()`
303  @*/
304 PetscErrorCode MatFindZeroRows(Mat mat, IS *zerorows)
305 {
306   IS       keptrows;
307   PetscInt m, n;
308 
309   PetscFunctionBegin;
310   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
311   PetscValidType(mat, 1);
312   PetscAssertPointer(zerorows, 2);
313   PetscCall(MatFindNonzeroRows(mat, &keptrows));
314   /* MatFindNonzeroRows sets keptrows to NULL if there are no zero rows.
315      In keeping with this convention, we set zerorows to NULL if there are no zero
316      rows. */
317   if (keptrows == NULL) {
318     *zerorows = NULL;
319   } else {
320     PetscCall(MatGetOwnershipRange(mat, &m, &n));
321     PetscCall(ISComplement(keptrows, m, n, zerorows));
322     PetscCall(ISDestroy(&keptrows));
323   }
324   PetscFunctionReturn(PETSC_SUCCESS);
325 }
326 
327 /*@
328   MatGetDiagonalBlock - Returns the part of the matrix associated with the on-process coupling
329 
330   Not Collective
331 
332   Input Parameter:
333 . A - the matrix
334 
335   Output Parameter:
336 . a - the diagonal part (which is a SEQUENTIAL matrix)
337 
338   Level: advanced
339 
340   Notes:
341   See `MatCreateAIJ()` for more information on the "diagonal part" of the matrix.
342 
343   Use caution, as the reference count on the returned matrix is not incremented and it is used as part of `A`'s normal operation.
344 
345 .seealso: [](ch_matrices), `Mat`, `MatCreateAIJ()`, `MATAIJ`, `MATBAIJ`, `MATSBAIJ`
346 @*/
347 PetscErrorCode MatGetDiagonalBlock(Mat A, Mat *a)
348 {
349   PetscFunctionBegin;
350   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
351   PetscValidType(A, 1);
352   PetscAssertPointer(a, 2);
353   PetscCheck(!A->factortype, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
354   if (A->ops->getdiagonalblock) PetscUseTypeMethod(A, getdiagonalblock, a);
355   else {
356     PetscMPIInt size;
357 
358     PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size));
359     PetscCheck(size == 1, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not for parallel matrix type %s", ((PetscObject)A)->type_name);
360     *a = A;
361   }
362   PetscFunctionReturn(PETSC_SUCCESS);
363 }
364 
365 /*@
366   MatGetTrace - Gets the trace of a matrix. The sum of the diagonal entries.
367 
368   Collective
369 
370   Input Parameter:
371 . mat - the matrix
372 
373   Output Parameter:
374 . trace - the sum of the diagonal entries
375 
376   Level: advanced
377 
378 .seealso: [](ch_matrices), `Mat`
379 @*/
380 PetscErrorCode MatGetTrace(Mat mat, PetscScalar *trace)
381 {
382   Vec diag;
383 
384   PetscFunctionBegin;
385   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
386   PetscAssertPointer(trace, 2);
387   PetscCall(MatCreateVecs(mat, &diag, NULL));
388   PetscCall(MatGetDiagonal(mat, diag));
389   PetscCall(VecSum(diag, trace));
390   PetscCall(VecDestroy(&diag));
391   PetscFunctionReturn(PETSC_SUCCESS);
392 }
393 
394 /*@
395   MatRealPart - Zeros out the imaginary part of the matrix
396 
397   Logically Collective
398 
399   Input Parameter:
400 . mat - the matrix
401 
402   Level: advanced
403 
404 .seealso: [](ch_matrices), `Mat`, `MatImaginaryPart()`
405 @*/
406 PetscErrorCode MatRealPart(Mat mat)
407 {
408   PetscFunctionBegin;
409   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
410   PetscValidType(mat, 1);
411   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
412   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
413   MatCheckPreallocated(mat, 1);
414   PetscUseTypeMethod(mat, realpart);
415   PetscFunctionReturn(PETSC_SUCCESS);
416 }
417 
418 /*@C
419   MatGetGhosts - Get the global indices of all ghost nodes defined by the sparse matrix
420 
421   Collective
422 
423   Input Parameter:
424 . mat - the matrix
425 
426   Output Parameters:
427 + nghosts - number of ghosts (for `MATBAIJ` and `MATSBAIJ` matrices there is one ghost for each matrix block)
428 - ghosts  - the global indices of the ghost points
429 
430   Level: advanced
431 
432   Note:
433   `nghosts` and `ghosts` are suitable to pass into `VecCreateGhost()` or `VecCreateGhostBlock()`
434 
435 .seealso: [](ch_matrices), `Mat`, `VecCreateGhost()`, `VecCreateGhostBlock()`
436 @*/
437 PetscErrorCode MatGetGhosts(Mat mat, PetscInt *nghosts, const PetscInt *ghosts[])
438 {
439   PetscFunctionBegin;
440   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
441   PetscValidType(mat, 1);
442   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
443   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
444   if (mat->ops->getghosts) PetscUseTypeMethod(mat, getghosts, nghosts, ghosts);
445   else {
446     if (nghosts) *nghosts = 0;
447     if (ghosts) *ghosts = NULL;
448   }
449   PetscFunctionReturn(PETSC_SUCCESS);
450 }
451 
452 /*@
453   MatImaginaryPart - Moves the imaginary part of the matrix to the real part and zeros the imaginary part
454 
455   Logically Collective
456 
457   Input Parameter:
458 . mat - the matrix
459 
460   Level: advanced
461 
462 .seealso: [](ch_matrices), `Mat`, `MatRealPart()`
463 @*/
464 PetscErrorCode MatImaginaryPart(Mat mat)
465 {
466   PetscFunctionBegin;
467   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
468   PetscValidType(mat, 1);
469   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
470   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
471   MatCheckPreallocated(mat, 1);
472   PetscUseTypeMethod(mat, imaginarypart);
473   PetscFunctionReturn(PETSC_SUCCESS);
474 }
475 
476 /*@
477   MatMissingDiagonal - Determine if sparse matrix is missing a diagonal entry (or block entry for `MATBAIJ` and `MATSBAIJ` matrices) in the nonzero structure
478 
479   Not Collective
480 
481   Input Parameter:
482 . mat - the matrix
483 
484   Output Parameters:
485 + missing - is any diagonal entry missing
486 - dd      - first diagonal entry that is missing (optional) on this process
487 
488   Level: advanced
489 
490   Note:
491   This does not return diagonal entries that are in the nonzero structure but happen to have a zero numerical value
492 
493 .seealso: [](ch_matrices), `Mat`
494 @*/
495 PetscErrorCode MatMissingDiagonal(Mat mat, PetscBool *missing, PetscInt *dd)
496 {
497   PetscFunctionBegin;
498   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
499   PetscValidType(mat, 1);
500   PetscAssertPointer(missing, 2);
501   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix %s", ((PetscObject)mat)->type_name);
502   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
503   PetscUseTypeMethod(mat, missingdiagonal, missing, dd);
504   PetscFunctionReturn(PETSC_SUCCESS);
505 }
506 
507 // PetscClangLinter pragma disable: -fdoc-section-header-unknown
508 /*@C
509   MatGetRow - Gets a row of a matrix.  You MUST call `MatRestoreRow()`
510   for each row that you get to ensure that your application does
511   not bleed memory.
512 
513   Not Collective
514 
515   Input Parameters:
516 + mat - the matrix
517 - row - the row to get
518 
519   Output Parameters:
520 + ncols - if not `NULL`, the number of nonzeros in `row`
521 . cols  - if not `NULL`, the column numbers
522 - vals  - if not `NULL`, the numerical values
523 
524   Level: advanced
525 
526   Notes:
527   This routine is provided for people who need to have direct access
528   to the structure of a matrix.  We hope that we provide enough
529   high-level matrix routines that few users will need it.
530 
531   `MatGetRow()` always returns 0-based column indices, regardless of
532   whether the internal representation is 0-based (default) or 1-based.
533 
534   For better efficiency, set `cols` and/or `vals` to `NULL` if you do
535   not wish to extract these quantities.
536 
537   The user can only examine the values extracted with `MatGetRow()`;
538   the values CANNOT be altered.  To change the matrix entries, one
539   must use `MatSetValues()`.
540 
541   You can only have one call to `MatGetRow()` outstanding for a particular
542   matrix at a time, per processor. `MatGetRow()` can only obtain rows
543   associated with the given processor, it cannot get rows from the
544   other processors; for that we suggest using `MatCreateSubMatrices()`, then
545   `MatGetRow()` on the submatrix. The row index passed to `MatGetRow()`
546   is in the global number of rows.
547 
548   Use `MatGetRowIJ()` and `MatRestoreRowIJ()` to access all the local indices of the sparse matrix.
549 
550   Use `MatSeqAIJGetArray()` and similar functions to access the numerical values for certain matrix types directly.
551 
552   Fortran Note:
553   The calling sequence is
554 .vb
555    MatGetRow(matrix,row,ncols,cols,values,ierr)
556          Mat         matrix (input)
557          PetscInt    row    (input)
558          PetscInt    ncols  (output)
559          PetscInt    cols(maxcols) (output)
560          PetscScalar values(maxcols) output
561 .ve
562   where maxcols >= maximum nonzeros in any row of the matrix.
563 
564 .seealso: [](ch_matrices), `Mat`, `MatRestoreRow()`, `MatSetValues()`, `MatGetValues()`, `MatCreateSubMatrices()`, `MatGetDiagonal()`, `MatGetRowIJ()`, `MatRestoreRowIJ()`
565 @*/
566 PetscErrorCode MatGetRow(Mat mat, PetscInt row, PetscInt *ncols, const PetscInt *cols[], const PetscScalar *vals[])
567 {
568   PetscInt incols;
569 
570   PetscFunctionBegin;
571   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
572   PetscValidType(mat, 1);
573   PetscCheck(mat->assembled, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
574   PetscCheck(!mat->factortype, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
575   MatCheckPreallocated(mat, 1);
576   PetscCheck(row >= mat->rmap->rstart && row < mat->rmap->rend, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Only for local rows, %" PetscInt_FMT " not in [%" PetscInt_FMT ",%" PetscInt_FMT ")", row, mat->rmap->rstart, mat->rmap->rend);
577   PetscCall(PetscLogEventBegin(MAT_GetRow, mat, 0, 0, 0));
578   PetscUseTypeMethod(mat, getrow, row, &incols, (PetscInt **)cols, (PetscScalar **)vals);
579   if (ncols) *ncols = incols;
580   PetscCall(PetscLogEventEnd(MAT_GetRow, mat, 0, 0, 0));
581   PetscFunctionReturn(PETSC_SUCCESS);
582 }
583 
584 /*@
585   MatConjugate - replaces the matrix values with their complex conjugates
586 
587   Logically Collective
588 
589   Input Parameter:
590 . mat - the matrix
591 
592   Level: advanced
593 
594 .seealso: [](ch_matrices), `Mat`, `MatRealPart()`, `MatImaginaryPart()`, `VecConjugate()`, `MatTranspose()`
595 @*/
596 PetscErrorCode MatConjugate(Mat mat)
597 {
598   PetscFunctionBegin;
599   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
600   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
601   if (PetscDefined(USE_COMPLEX) && mat->hermitian != PETSC_BOOL3_TRUE) {
602     PetscUseTypeMethod(mat, conjugate);
603     PetscCall(PetscObjectStateIncrease((PetscObject)mat));
604   }
605   PetscFunctionReturn(PETSC_SUCCESS);
606 }
607 
608 /*@C
609   MatRestoreRow - Frees any temporary space allocated by `MatGetRow()`.
610 
611   Not Collective
612 
613   Input Parameters:
614 + mat   - the matrix
615 . row   - the row to get
616 . ncols - the number of nonzeros
617 . cols  - the columns of the nonzeros
618 - vals  - if nonzero the column values
619 
620   Level: advanced
621 
622   Notes:
623   This routine should be called after you have finished examining the entries.
624 
625   This routine zeros out `ncols`, `cols`, and `vals`. This is to prevent accidental
626   us of the array after it has been restored. If you pass `NULL`, it will
627   not zero the pointers.  Use of `cols` or `vals` after `MatRestoreRow()` is invalid.
628 
629   Fortran Note:
630   `MatRestoreRow()` MUST be called after `MatGetRow()`
631   before another call to `MatGetRow()` can be made.
632 
633 .seealso: [](ch_matrices), `Mat`, `MatGetRow()`
634 @*/
635 PetscErrorCode MatRestoreRow(Mat mat, PetscInt row, PetscInt *ncols, const PetscInt *cols[], const PetscScalar *vals[])
636 {
637   PetscFunctionBegin;
638   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
639   if (ncols) PetscAssertPointer(ncols, 3);
640   PetscCheck(mat->assembled, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
641   if (!mat->ops->restorerow) PetscFunctionReturn(PETSC_SUCCESS);
642   PetscUseTypeMethod(mat, restorerow, row, ncols, (PetscInt **)cols, (PetscScalar **)vals);
643   if (ncols) *ncols = 0;
644   if (cols) *cols = NULL;
645   if (vals) *vals = NULL;
646   PetscFunctionReturn(PETSC_SUCCESS);
647 }
648 
649 /*@
650   MatGetRowUpperTriangular - Sets a flag to enable calls to `MatGetRow()` for matrix in `MATSBAIJ` format.
651   You should call `MatRestoreRowUpperTriangular()` after calling` MatGetRow()` and `MatRestoreRow()` to disable the flag.
652 
653   Not Collective
654 
655   Input Parameter:
656 . mat - the matrix
657 
658   Level: advanced
659 
660   Note:
661   The flag is to ensure that users are aware that `MatGetRow()` only provides the upper triangular part of the row for the matrices in `MATSBAIJ` format.
662 
663 .seealso: [](ch_matrices), `Mat`, `MATSBAIJ`, `MatRestoreRowUpperTriangular()`
664 @*/
665 PetscErrorCode MatGetRowUpperTriangular(Mat mat)
666 {
667   PetscFunctionBegin;
668   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
669   PetscValidType(mat, 1);
670   PetscCheck(mat->assembled, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
671   PetscCheck(!mat->factortype, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
672   MatCheckPreallocated(mat, 1);
673   if (!mat->ops->getrowuppertriangular) PetscFunctionReturn(PETSC_SUCCESS);
674   PetscUseTypeMethod(mat, getrowuppertriangular);
675   PetscFunctionReturn(PETSC_SUCCESS);
676 }
677 
678 /*@
679   MatRestoreRowUpperTriangular - Disable calls to `MatGetRow()` for matrix in `MATSBAIJ` format.
680 
681   Not Collective
682 
683   Input Parameter:
684 . mat - the matrix
685 
686   Level: advanced
687 
688   Note:
689   This routine should be called after you have finished calls to `MatGetRow()` and `MatRestoreRow()`.
690 
691 .seealso: [](ch_matrices), `Mat`, `MATSBAIJ`, `MatGetRowUpperTriangular()`
692 @*/
693 PetscErrorCode MatRestoreRowUpperTriangular(Mat mat)
694 {
695   PetscFunctionBegin;
696   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
697   PetscValidType(mat, 1);
698   PetscCheck(mat->assembled, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
699   PetscCheck(!mat->factortype, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
700   MatCheckPreallocated(mat, 1);
701   if (!mat->ops->restorerowuppertriangular) PetscFunctionReturn(PETSC_SUCCESS);
702   PetscUseTypeMethod(mat, restorerowuppertriangular);
703   PetscFunctionReturn(PETSC_SUCCESS);
704 }
705 
706 /*@
707   MatSetOptionsPrefix - Sets the prefix used for searching for all
708   `Mat` options in the database.
709 
710   Logically Collective
711 
712   Input Parameters:
713 + A      - the matrix
714 - prefix - the prefix to prepend to all option names
715 
716   Level: advanced
717 
718   Notes:
719   A hyphen (-) must NOT be given at the beginning of the prefix name.
720   The first character of all runtime options is AUTOMATICALLY the hyphen.
721 
722   This is NOT used for options for the factorization of the matrix. Normally the
723   prefix is automatically passed in from the PC calling the factorization. To set
724   it directly use  `MatSetOptionsPrefixFactor()`
725 
726 .seealso: [](ch_matrices), `Mat`, `MatSetFromOptions()`, `MatSetOptionsPrefixFactor()`
727 @*/
728 PetscErrorCode MatSetOptionsPrefix(Mat A, const char prefix[])
729 {
730   PetscFunctionBegin;
731   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
732   PetscCall(PetscObjectSetOptionsPrefix((PetscObject)A, prefix));
733   PetscFunctionReturn(PETSC_SUCCESS);
734 }
735 
736 /*@
737   MatSetOptionsPrefixFactor - Sets the prefix used for searching for all matrix factor options in the database for
738   for matrices created with `MatGetFactor()`
739 
740   Logically Collective
741 
742   Input Parameters:
743 + A      - the matrix
744 - prefix - the prefix to prepend to all option names for the factored matrix
745 
746   Level: developer
747 
748   Notes:
749   A hyphen (-) must NOT be given at the beginning of the prefix name.
750   The first character of all runtime options is AUTOMATICALLY the hyphen.
751 
752   Normally the prefix is automatically passed in from the `PC` calling the factorization. To set
753   it directly when not using `KSP`/`PC` use  `MatSetOptionsPrefixFactor()`
754 
755 .seealso: [](ch_matrices), `Mat`,   [Matrix Factorization](sec_matfactor), `MatGetFactor()`, `MatSetFromOptions()`, `MatSetOptionsPrefix()`, `MatAppendOptionsPrefixFactor()`
756 @*/
757 PetscErrorCode MatSetOptionsPrefixFactor(Mat A, const char prefix[])
758 {
759   PetscFunctionBegin;
760   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
761   if (prefix) {
762     PetscAssertPointer(prefix, 2);
763     PetscCheck(prefix[0] != '-', PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONG, "Options prefix should not begin with a hyphen");
764     if (prefix != A->factorprefix) {
765       PetscCall(PetscFree(A->factorprefix));
766       PetscCall(PetscStrallocpy(prefix, &A->factorprefix));
767     }
768   } else PetscCall(PetscFree(A->factorprefix));
769   PetscFunctionReturn(PETSC_SUCCESS);
770 }
771 
772 /*@
773   MatAppendOptionsPrefixFactor - Appends to the prefix used for searching for all matrix factor options in the database for
774   for matrices created with `MatGetFactor()`
775 
776   Logically Collective
777 
778   Input Parameters:
779 + A      - the matrix
780 - prefix - the prefix to prepend to all option names for the factored matrix
781 
782   Level: developer
783 
784   Notes:
785   A hyphen (-) must NOT be given at the beginning of the prefix name.
786   The first character of all runtime options is AUTOMATICALLY the hyphen.
787 
788   Normally the prefix is automatically passed in from the `PC` calling the factorization. To set
789   it directly when not using `KSP`/`PC` use  `MatAppendOptionsPrefixFactor()`
790 
791 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatGetFactor()`, `PetscOptionsCreate()`, `PetscOptionsDestroy()`, `PetscObjectSetOptionsPrefix()`, `PetscObjectPrependOptionsPrefix()`,
792           `PetscObjectGetOptionsPrefix()`, `TSAppendOptionsPrefix()`, `SNESAppendOptionsPrefix()`, `KSPAppendOptionsPrefix()`, `MatSetOptionsPrefixFactor()`,
793           `MatSetOptionsPrefix()`
794 @*/
795 PetscErrorCode MatAppendOptionsPrefixFactor(Mat A, const char prefix[])
796 {
797   size_t len1, len2, new_len;
798 
799   PetscFunctionBegin;
800   PetscValidHeader(A, 1);
801   if (!prefix) PetscFunctionReturn(PETSC_SUCCESS);
802   if (!A->factorprefix) {
803     PetscCall(MatSetOptionsPrefixFactor(A, prefix));
804     PetscFunctionReturn(PETSC_SUCCESS);
805   }
806   PetscCheck(prefix[0] != '-', PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONG, "Options prefix should not begin with a hyphen");
807 
808   PetscCall(PetscStrlen(A->factorprefix, &len1));
809   PetscCall(PetscStrlen(prefix, &len2));
810   new_len = len1 + len2 + 1;
811   PetscCall(PetscRealloc(new_len * sizeof(*A->factorprefix), &A->factorprefix));
812   PetscCall(PetscStrncpy(A->factorprefix + len1, prefix, len2 + 1));
813   PetscFunctionReturn(PETSC_SUCCESS);
814 }
815 
816 /*@
817   MatAppendOptionsPrefix - Appends to the prefix used for searching for all
818   matrix options in the database.
819 
820   Logically Collective
821 
822   Input Parameters:
823 + A      - the matrix
824 - prefix - the prefix to prepend to all option names
825 
826   Level: advanced
827 
828   Note:
829   A hyphen (-) must NOT be given at the beginning of the prefix name.
830   The first character of all runtime options is AUTOMATICALLY the hyphen.
831 
832 .seealso: [](ch_matrices), `Mat`, `MatGetOptionsPrefix()`, `MatAppendOptionsPrefixFactor()`, `MatSetOptionsPrefix()`
833 @*/
834 PetscErrorCode MatAppendOptionsPrefix(Mat A, const char prefix[])
835 {
836   PetscFunctionBegin;
837   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
838   PetscCall(PetscObjectAppendOptionsPrefix((PetscObject)A, prefix));
839   PetscFunctionReturn(PETSC_SUCCESS);
840 }
841 
842 /*@
843   MatGetOptionsPrefix - Gets the prefix used for searching for all
844   matrix options in the database.
845 
846   Not Collective
847 
848   Input Parameter:
849 . A - the matrix
850 
851   Output Parameter:
852 . prefix - pointer to the prefix string used
853 
854   Level: advanced
855 
856   Fortran Note:
857   The user should pass in a string `prefix` of
858   sufficient length to hold the prefix.
859 
860 .seealso: [](ch_matrices), `Mat`, `MatAppendOptionsPrefix()`, `MatSetOptionsPrefix()`, `MatAppendOptionsPrefixFactor()`, `MatSetOptionsPrefixFactor()`
861 @*/
862 PetscErrorCode MatGetOptionsPrefix(Mat A, const char *prefix[])
863 {
864   PetscFunctionBegin;
865   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
866   PetscAssertPointer(prefix, 2);
867   PetscCall(PetscObjectGetOptionsPrefix((PetscObject)A, prefix));
868   PetscFunctionReturn(PETSC_SUCCESS);
869 }
870 
871 /*@
872   MatGetState - Gets the state of a `Mat`. Same value as returned by `PetscObjectStateGet()`
873 
874   Not Collective
875 
876   Input Parameter:
877 . A - the matrix
878 
879   Output Parameter:
880 . state - the object state
881 
882   Level: advanced
883 
884   Note:
885   Object state is an integer which gets increased every time
886   the object is changed. By saving and later querying the object state
887   one can determine whether information about the object is still current.
888 
889   See `MatGetNonzeroState()` to determine if the nonzero structure of the matrix has changed.
890 
891 .seealso: [](ch_matrices), `Mat`, `MatCreate()`, `PetscObjectStateGet()`, `MatGetNonzeroState()`
892 @*/
893 PetscErrorCode MatGetState(Mat A, PetscObjectState *state)
894 {
895   PetscFunctionBegin;
896   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
897   PetscAssertPointer(state, 2);
898   PetscCall(PetscObjectStateGet((PetscObject)A, state));
899   PetscFunctionReturn(PETSC_SUCCESS);
900 }
901 
902 /*@
903   MatResetPreallocation - Reset matrix to use the original nonzero pattern provided by the user.
904 
905   Collective
906 
907   Input Parameter:
908 . A - the matrix
909 
910   Level: beginner
911 
912   Notes:
913   The allocated memory will be shrunk after calling `MatAssemblyBegin()` and `MatAssemblyEnd()` with `MAT_FINAL_ASSEMBLY`.
914 
915   Users can reset the preallocation to access the original memory.
916 
917   Currently only supported for  `MATAIJ` matrices.
918 
919 .seealso: [](ch_matrices), `Mat`, `MatSeqAIJSetPreallocation()`, `MatMPIAIJSetPreallocation()`, `MatXAIJSetPreallocation()`
920 @*/
921 PetscErrorCode MatResetPreallocation(Mat A)
922 {
923   PetscFunctionBegin;
924   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
925   PetscValidType(A, 1);
926   PetscCheck(A->insertmode == NOT_SET_VALUES, PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot reset preallocation after setting some values but not yet calling MatAssemblyBegin()/MatAssemblyEnd()");
927   if (A->num_ass == 0) PetscFunctionReturn(PETSC_SUCCESS);
928   PetscUseMethod(A, "MatResetPreallocation_C", (Mat), (A));
929   PetscFunctionReturn(PETSC_SUCCESS);
930 }
931 
932 /*@
933   MatSetUp - Sets up the internal matrix data structures for later use.
934 
935   Collective
936 
937   Input Parameter:
938 . A - the matrix
939 
940   Level: intermediate
941 
942   Notes:
943   If the user has not set preallocation for this matrix then an efficient algorithm will be used for the first round of
944   setting values in the matrix.
945 
946   This routine is called internally by other matrix functions when needed so rarely needs to be called by users
947 
948 .seealso: [](ch_matrices), `Mat`, `MatMult()`, `MatCreate()`, `MatDestroy()`, `MatXAIJSetPreallocation()`
949 @*/
950 PetscErrorCode MatSetUp(Mat A)
951 {
952   PetscFunctionBegin;
953   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
954   if (!((PetscObject)A)->type_name) {
955     PetscMPIInt size;
956 
957     PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size));
958     PetscCall(MatSetType(A, size == 1 ? MATSEQAIJ : MATMPIAIJ));
959   }
960   if (!A->preallocated) PetscTryTypeMethod(A, setup);
961   PetscCall(PetscLayoutSetUp(A->rmap));
962   PetscCall(PetscLayoutSetUp(A->cmap));
963   A->preallocated = PETSC_TRUE;
964   PetscFunctionReturn(PETSC_SUCCESS);
965 }
966 
967 #if defined(PETSC_HAVE_SAWS)
968   #include <petscviewersaws.h>
969 #endif
970 
971 /*
972    If threadsafety is on extraneous matrices may be printed
973 
974    This flag cannot be stored in the matrix because the original matrix in MatView() may assemble a new matrix which is passed into MatViewFromOptions()
975 */
976 #if !defined(PETSC_HAVE_THREADSAFETY)
977 static PetscInt insidematview = 0;
978 #endif
979 
980 /*@
981   MatViewFromOptions - View properties of the matrix based on options set in the options database
982 
983   Collective
984 
985   Input Parameters:
986 + A    - the matrix
987 . obj  - optional additional object that provides the options prefix to use
988 - name - command line option
989 
990   Options Database Key:
991 . -mat_view [viewertype]:... - the viewer and its options
992 
993   Level: intermediate
994 
995   Note:
996 .vb
997     If no value is provided ascii:stdout is used
998        ascii[:[filename][:[format][:append]]]    defaults to stdout - format can be one of ascii_info, ascii_info_detail, or ascii_matlab,
999                                                   for example ascii::ascii_info prints just the information about the object not all details
1000                                                   unless :append is given filename opens in write mode, overwriting what was already there
1001        binary[:[filename][:[format][:append]]]   defaults to the file binaryoutput
1002        draw[:drawtype[:filename]]                for example, draw:tikz, draw:tikz:figure.tex  or draw:x
1003        socket[:port]                             defaults to the standard output port
1004        saws[:communicatorname]                    publishes object to the Scientific Application Webserver (SAWs)
1005 .ve
1006 
1007 .seealso: [](ch_matrices), `Mat`, `MatView()`, `PetscObjectViewFromOptions()`, `MatCreate()`
1008 @*/
1009 PetscErrorCode MatViewFromOptions(Mat A, PetscObject obj, const char name[])
1010 {
1011   PetscFunctionBegin;
1012   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
1013 #if !defined(PETSC_HAVE_THREADSAFETY)
1014   if (insidematview) PetscFunctionReturn(PETSC_SUCCESS);
1015 #endif
1016   PetscCall(PetscObjectViewFromOptions((PetscObject)A, obj, name));
1017   PetscFunctionReturn(PETSC_SUCCESS);
1018 }
1019 
1020 /*@
1021   MatView - display information about a matrix in a variety ways
1022 
1023   Collective on viewer
1024 
1025   Input Parameters:
1026 + mat    - the matrix
1027 - viewer - visualization context
1028 
1029   Options Database Keys:
1030 + -mat_view ::ascii_info           - Prints info on matrix at conclusion of `MatAssemblyEnd()`
1031 . -mat_view ::ascii_info_detail    - Prints more detailed info
1032 . -mat_view                        - Prints matrix in ASCII format
1033 . -mat_view ::ascii_matlab         - Prints matrix in MATLAB format
1034 . -mat_view draw                   - PetscDraws nonzero structure of matrix, using `MatView()` and `PetscDrawOpenX()`.
1035 . -display <name>                  - Sets display name (default is host)
1036 . -draw_pause <sec>                - Sets number of seconds to pause after display
1037 . -mat_view socket                 - Sends matrix to socket, can be accessed from MATLAB (see Users-Manual: ch_matlab for details)
1038 . -viewer_socket_machine <machine> - -
1039 . -viewer_socket_port <port>       - -
1040 . -mat_view binary                 - save matrix to file in binary format
1041 - -viewer_binary_filename <name>   - -
1042 
1043   Level: beginner
1044 
1045   Notes:
1046   The available visualization contexts include
1047 +    `PETSC_VIEWER_STDOUT_SELF` - for sequential matrices
1048 .    `PETSC_VIEWER_STDOUT_WORLD` - for parallel matrices created on `PETSC_COMM_WORLD`
1049 .    `PETSC_VIEWER_STDOUT_`(comm) - for matrices created on MPI communicator comm
1050 -     `PETSC_VIEWER_DRAW_WORLD` - graphical display of nonzero structure
1051 
1052   The user can open alternative visualization contexts with
1053 +    `PetscViewerASCIIOpen()` - Outputs matrix to a specified file
1054 .    `PetscViewerBinaryOpen()` - Outputs matrix in binary to a
1055   specified file; corresponding input uses `MatLoad()`
1056 .    `PetscViewerDrawOpen()` - Outputs nonzero matrix structure to
1057   an X window display
1058 -    `PetscViewerSocketOpen()` - Outputs matrix to Socket viewer.
1059   Currently only the `MATSEQDENSE` and `MATAIJ`
1060   matrix types support the Socket viewer.
1061 
1062   The user can call `PetscViewerPushFormat()` to specify the output
1063   format of ASCII printed objects (when using `PETSC_VIEWER_STDOUT_SELF`,
1064   `PETSC_VIEWER_STDOUT_WORLD` and `PetscViewerASCIIOpen()`).  Available formats include
1065 +    `PETSC_VIEWER_DEFAULT` - default, prints matrix contents
1066 .    `PETSC_VIEWER_ASCII_MATLAB` - prints matrix contents in MATLAB format
1067 .    `PETSC_VIEWER_ASCII_DENSE` - prints entire matrix including zeros
1068 .    `PETSC_VIEWER_ASCII_COMMON` - prints matrix contents, using a sparse
1069   format common among all matrix types
1070 .    `PETSC_VIEWER_ASCII_IMPL` - prints matrix contents, using an implementation-specific
1071   format (which is in many cases the same as the default)
1072 .    `PETSC_VIEWER_ASCII_INFO` - prints basic information about the matrix
1073   size and structure (not the matrix entries)
1074 -    `PETSC_VIEWER_ASCII_INFO_DETAIL` - prints more detailed information about
1075   the matrix structure (still not vector or matrix entries)
1076 
1077   The ASCII viewers are only recommended for small matrices on at most a moderate number of processes,
1078   the program will seemingly hang and take hours for larger matrices, for larger matrices one should use the binary format.
1079 
1080   In the debugger you can do "call MatView(mat,0)" to display the matrix. (The same holds for any PETSc object viewer).
1081 
1082   See the manual page for `MatLoad()` for the exact format of the binary file when the binary
1083   viewer is used.
1084 
1085   See share/petsc/matlab/PetscBinaryRead.m for a MATLAB code that can read in the binary file when the binary
1086   viewer is used and lib/petsc/bin/PetscBinaryIO.py for loading them into Python.
1087 
1088   One can use '-mat_view draw -draw_pause -1' to pause the graphical display of matrix nonzero structure,
1089   and then use the following mouse functions.
1090 .vb
1091   left mouse: zoom in
1092   middle mouse: zoom out
1093   right mouse: continue with the simulation
1094 .ve
1095 
1096 .seealso: [](ch_matrices), `Mat`, `PetscViewerPushFormat()`, `PetscViewerASCIIOpen()`, `PetscViewerDrawOpen()`, `PetscViewer`,
1097           `PetscViewerSocketOpen()`, `PetscViewerBinaryOpen()`, `MatLoad()`, `MatViewFromOptions()`
1098 @*/
1099 PetscErrorCode MatView(Mat mat, PetscViewer viewer)
1100 {
1101   PetscInt          rows, cols, rbs, cbs;
1102   PetscBool         isascii, isstring, issaws;
1103   PetscViewerFormat format;
1104   PetscMPIInt       size;
1105 
1106   PetscFunctionBegin;
1107   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
1108   PetscValidType(mat, 1);
1109   if (!viewer) PetscCall(PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)mat), &viewer));
1110   PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2);
1111 
1112   PetscCall(PetscViewerGetFormat(viewer, &format));
1113   PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)viewer), &size));
1114   if (size == 1 && format == PETSC_VIEWER_LOAD_BALANCE) PetscFunctionReturn(PETSC_SUCCESS);
1115 
1116 #if !defined(PETSC_HAVE_THREADSAFETY)
1117   insidematview++;
1118 #endif
1119   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSTRING, &isstring));
1120   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &isascii));
1121   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSAWS, &issaws));
1122   PetscCheck((isascii && (format == PETSC_VIEWER_ASCII_INFO || format == PETSC_VIEWER_ASCII_INFO_DETAIL)) || !mat->factortype, PetscObjectComm((PetscObject)viewer), PETSC_ERR_ARG_WRONGSTATE, "No viewers for factored matrix except ASCII, info, or info_detail");
1123 
1124   PetscCall(PetscLogEventBegin(MAT_View, mat, viewer, 0, 0));
1125   if (isascii) {
1126     if (!mat->preallocated) {
1127       PetscCall(PetscViewerASCIIPrintf(viewer, "Matrix has not been preallocated yet\n"));
1128 #if !defined(PETSC_HAVE_THREADSAFETY)
1129       insidematview--;
1130 #endif
1131       PetscCall(PetscLogEventEnd(MAT_View, mat, viewer, 0, 0));
1132       PetscFunctionReturn(PETSC_SUCCESS);
1133     }
1134     if (!mat->assembled) {
1135       PetscCall(PetscViewerASCIIPrintf(viewer, "Matrix has not been assembled yet\n"));
1136 #if !defined(PETSC_HAVE_THREADSAFETY)
1137       insidematview--;
1138 #endif
1139       PetscCall(PetscLogEventEnd(MAT_View, mat, viewer, 0, 0));
1140       PetscFunctionReturn(PETSC_SUCCESS);
1141     }
1142     PetscCall(PetscObjectPrintClassNamePrefixType((PetscObject)mat, viewer));
1143     if (format == PETSC_VIEWER_ASCII_INFO || format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
1144       MatNullSpace nullsp, transnullsp;
1145 
1146       PetscCall(PetscViewerASCIIPushTab(viewer));
1147       PetscCall(MatGetSize(mat, &rows, &cols));
1148       PetscCall(MatGetBlockSizes(mat, &rbs, &cbs));
1149       if (rbs != 1 || cbs != 1) {
1150         if (rbs != cbs) PetscCall(PetscViewerASCIIPrintf(viewer, "rows=%" PetscInt_FMT ", cols=%" PetscInt_FMT ", rbs=%" PetscInt_FMT ", cbs=%" PetscInt_FMT "%s\n", rows, cols, rbs, cbs, mat->bsizes ? " variable blocks set" : ""));
1151         else PetscCall(PetscViewerASCIIPrintf(viewer, "rows=%" PetscInt_FMT ", cols=%" PetscInt_FMT ", bs=%" PetscInt_FMT "%s\n", rows, cols, rbs, mat->bsizes ? " variable blocks set" : ""));
1152       } else PetscCall(PetscViewerASCIIPrintf(viewer, "rows=%" PetscInt_FMT ", cols=%" PetscInt_FMT "\n", rows, cols));
1153       if (mat->factortype) {
1154         MatSolverType solver;
1155         PetscCall(MatFactorGetSolverType(mat, &solver));
1156         PetscCall(PetscViewerASCIIPrintf(viewer, "package used to perform factorization: %s\n", solver));
1157       }
1158       if (mat->ops->getinfo) {
1159         MatInfo info;
1160         PetscCall(MatGetInfo(mat, MAT_GLOBAL_SUM, &info));
1161         PetscCall(PetscViewerASCIIPrintf(viewer, "total: nonzeros=%.f, allocated nonzeros=%.f\n", info.nz_used, info.nz_allocated));
1162         if (!mat->factortype) PetscCall(PetscViewerASCIIPrintf(viewer, "total number of mallocs used during MatSetValues calls=%" PetscInt_FMT "\n", (PetscInt)info.mallocs));
1163       }
1164       PetscCall(MatGetNullSpace(mat, &nullsp));
1165       PetscCall(MatGetTransposeNullSpace(mat, &transnullsp));
1166       if (nullsp) PetscCall(PetscViewerASCIIPrintf(viewer, "  has attached null space\n"));
1167       if (transnullsp && transnullsp != nullsp) PetscCall(PetscViewerASCIIPrintf(viewer, "  has attached transposed null space\n"));
1168       PetscCall(MatGetNearNullSpace(mat, &nullsp));
1169       if (nullsp) PetscCall(PetscViewerASCIIPrintf(viewer, "  has attached near null space\n"));
1170       PetscCall(PetscViewerASCIIPushTab(viewer));
1171       PetscCall(MatProductView(mat, viewer));
1172       PetscCall(PetscViewerASCIIPopTab(viewer));
1173       if (mat->bsizes && format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
1174         IS tmp;
1175 
1176         PetscCall(ISCreateGeneral(PetscObjectComm((PetscObject)viewer), mat->nblocks, mat->bsizes, PETSC_USE_POINTER, &tmp));
1177         PetscCall(PetscObjectSetName((PetscObject)tmp, "Block Sizes"));
1178         PetscCall(PetscViewerASCIIPushTab(viewer));
1179         PetscCall(ISView(tmp, viewer));
1180         PetscCall(PetscViewerASCIIPopTab(viewer));
1181         PetscCall(ISDestroy(&tmp));
1182       }
1183     }
1184   } else if (issaws) {
1185 #if defined(PETSC_HAVE_SAWS)
1186     PetscMPIInt rank;
1187 
1188     PetscCall(PetscObjectName((PetscObject)mat));
1189     PetscCallMPI(MPI_Comm_rank(PETSC_COMM_WORLD, &rank));
1190     if (!((PetscObject)mat)->amsmem && rank == 0) PetscCall(PetscObjectViewSAWs((PetscObject)mat, viewer));
1191 #endif
1192   } else if (isstring) {
1193     const char *type;
1194     PetscCall(MatGetType(mat, &type));
1195     PetscCall(PetscViewerStringSPrintf(viewer, " MatType: %-7.7s", type));
1196     PetscTryTypeMethod(mat, view, viewer);
1197   }
1198   if ((format == PETSC_VIEWER_NATIVE || format == PETSC_VIEWER_LOAD_BALANCE) && mat->ops->viewnative) {
1199     PetscCall(PetscViewerASCIIPushTab(viewer));
1200     PetscUseTypeMethod(mat, viewnative, viewer);
1201     PetscCall(PetscViewerASCIIPopTab(viewer));
1202   } else if (mat->ops->view) {
1203     PetscCall(PetscViewerASCIIPushTab(viewer));
1204     PetscUseTypeMethod(mat, view, viewer);
1205     PetscCall(PetscViewerASCIIPopTab(viewer));
1206   }
1207   if (isascii) {
1208     PetscCall(PetscViewerGetFormat(viewer, &format));
1209     if (format == PETSC_VIEWER_ASCII_INFO || format == PETSC_VIEWER_ASCII_INFO_DETAIL) PetscCall(PetscViewerASCIIPopTab(viewer));
1210   }
1211   PetscCall(PetscLogEventEnd(MAT_View, mat, viewer, 0, 0));
1212 #if !defined(PETSC_HAVE_THREADSAFETY)
1213   insidematview--;
1214 #endif
1215   PetscFunctionReturn(PETSC_SUCCESS);
1216 }
1217 
1218 #if defined(PETSC_USE_DEBUG)
1219   #include <../src/sys/totalview/tv_data_display.h>
1220 PETSC_UNUSED static int TV_display_type(const struct _p_Mat *mat)
1221 {
1222   TV_add_row("Local rows", "int", &mat->rmap->n);
1223   TV_add_row("Local columns", "int", &mat->cmap->n);
1224   TV_add_row("Global rows", "int", &mat->rmap->N);
1225   TV_add_row("Global columns", "int", &mat->cmap->N);
1226   TV_add_row("Typename", TV_ascii_string_type, ((PetscObject)mat)->type_name);
1227   return TV_format_OK;
1228 }
1229 #endif
1230 
1231 /*@
1232   MatLoad - Loads a matrix that has been stored in binary/HDF5 format
1233   with `MatView()`.  The matrix format is determined from the options database.
1234   Generates a parallel MPI matrix if the communicator has more than one
1235   processor.  The default matrix type is `MATAIJ`.
1236 
1237   Collective
1238 
1239   Input Parameters:
1240 + mat    - the newly loaded matrix, this needs to have been created with `MatCreate()`
1241             or some related function before a call to `MatLoad()`
1242 - viewer - `PETSCVIEWERBINARY`/`PETSCVIEWERHDF5` file viewer
1243 
1244   Options Database Key:
1245 . -matload_block_size <bs> - set block size
1246 
1247   Level: beginner
1248 
1249   Notes:
1250   If the `Mat` type has not yet been given then `MATAIJ` is used, call `MatSetFromOptions()` on the
1251   `Mat` before calling this routine if you wish to set it from the options database.
1252 
1253   `MatLoad()` automatically loads into the options database any options
1254   given in the file filename.info where filename is the name of the file
1255   that was passed to the `PetscViewerBinaryOpen()`. The options in the info
1256   file will be ignored if you use the -viewer_binary_skip_info option.
1257 
1258   If the type or size of mat is not set before a call to `MatLoad()`, PETSc
1259   sets the default matrix type AIJ and sets the local and global sizes.
1260   If type and/or size is already set, then the same are used.
1261 
1262   In parallel, each processor can load a subset of rows (or the
1263   entire matrix).  This routine is especially useful when a large
1264   matrix is stored on disk and only part of it is desired on each
1265   processor.  For example, a parallel solver may access only some of
1266   the rows from each processor.  The algorithm used here reads
1267   relatively small blocks of data rather than reading the entire
1268   matrix and then subsetting it.
1269 
1270   Viewer's `PetscViewerType` must be either `PETSCVIEWERBINARY` or `PETSCVIEWERHDF5`.
1271   Such viewer can be created using `PetscViewerBinaryOpen()` or `PetscViewerHDF5Open()`,
1272   or the sequence like
1273 .vb
1274     `PetscViewer` v;
1275     `PetscViewerCreate`(`PETSC_COMM_WORLD`,&v);
1276     `PetscViewerSetType`(v,`PETSCVIEWERBINARY`);
1277     `PetscViewerSetFromOptions`(v);
1278     `PetscViewerFileSetMode`(v,`FILE_MODE_READ`);
1279     `PetscViewerFileSetName`(v,"datafile");
1280 .ve
1281   The optional `PetscViewerSetFromOptions()` call allows overriding `PetscViewerSetType()` using the option
1282 $ -viewer_type {binary, hdf5}
1283 
1284   See the example src/ksp/ksp/tutorials/ex27.c with the first approach,
1285   and src/mat/tutorials/ex10.c with the second approach.
1286 
1287   In case of `PETSCVIEWERBINARY`, a native PETSc binary format is used. Each of the blocks
1288   is read onto MPI rank 0 and then shipped to its destination MPI rank, one after another.
1289   Multiple objects, both matrices and vectors, can be stored within the same file.
1290   Their `PetscObject` name is ignored; they are loaded in the order of their storage.
1291 
1292   Most users should not need to know the details of the binary storage
1293   format, since `MatLoad()` and `MatView()` completely hide these details.
1294   But for anyone who is interested, the standard binary matrix storage
1295   format is
1296 
1297 .vb
1298     PetscInt    MAT_FILE_CLASSID
1299     PetscInt    number of rows
1300     PetscInt    number of columns
1301     PetscInt    total number of nonzeros
1302     PetscInt    *number nonzeros in each row
1303     PetscInt    *column indices of all nonzeros (starting index is zero)
1304     PetscScalar *values of all nonzeros
1305 .ve
1306   If PETSc was not configured with `--with-64-bit-indices` then only `MATMPIAIJ` matrices with more than `PETSC_INT_MAX` non-zeros can be
1307   stored or loaded (each MPI process part of the matrix must have less than `PETSC_INT_MAX` nonzeros). Since the total nonzero count in this
1308   case will not fit in a (32-bit) `PetscInt` the value `PETSC_INT_MAX` is used for the header entry `total number of nonzeros`.
1309 
1310   PETSc automatically does the byte swapping for
1311   machines that store the bytes reversed. Thus if you write your own binary
1312   read/write routines you have to swap the bytes; see `PetscBinaryRead()`
1313   and `PetscBinaryWrite()` to see how this may be done.
1314 
1315   In case of `PETSCVIEWERHDF5`, a parallel HDF5 reader is used.
1316   Each processor's chunk is loaded independently by its owning MPI process.
1317   Multiple objects, both matrices and vectors, can be stored within the same file.
1318   They are looked up by their PetscObject name.
1319 
1320   As the MATLAB MAT-File Version 7.3 format is also a HDF5 flavor, we decided to use
1321   by default the same structure and naming of the AIJ arrays and column count
1322   within the HDF5 file. This means that a MAT file saved with -v7.3 flag, e.g.
1323 $    save example.mat A b -v7.3
1324   can be directly read by this routine (see Reference 1 for details).
1325 
1326   Depending on your MATLAB version, this format might be a default,
1327   otherwise you can set it as default in Preferences.
1328 
1329   Unless -nocompression flag is used to save the file in MATLAB,
1330   PETSc must be configured with ZLIB package.
1331 
1332   See also examples src/mat/tutorials/ex10.c and src/ksp/ksp/tutorials/ex27.c
1333 
1334   This reader currently supports only real `MATSEQAIJ`, `MATMPIAIJ`, `MATSEQDENSE` and `MATMPIDENSE` matrices for `PETSCVIEWERHDF5`
1335 
1336   Corresponding `MatView()` is not yet implemented.
1337 
1338   The loaded matrix is actually a transpose of the original one in MATLAB,
1339   unless you push `PETSC_VIEWER_HDF5_MAT` format (see examples above).
1340   With this format, matrix is automatically transposed by PETSc,
1341   unless the matrix is marked as SPD or symmetric
1342   (see `MatSetOption()`, `MAT_SPD`, `MAT_SYMMETRIC`).
1343 
1344   See MATLAB Documentation on `save()`, <https://www.mathworks.com/help/matlab/ref/save.html#btox10b-1-version>
1345 
1346 .seealso: [](ch_matrices), `Mat`, `PetscViewerBinaryOpen()`, `PetscViewerSetType()`, `MatView()`, `VecLoad()`
1347  @*/
1348 PetscErrorCode MatLoad(Mat mat, PetscViewer viewer)
1349 {
1350   PetscBool flg;
1351 
1352   PetscFunctionBegin;
1353   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
1354   PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2);
1355 
1356   if (!((PetscObject)mat)->type_name) PetscCall(MatSetType(mat, MATAIJ));
1357 
1358   flg = PETSC_FALSE;
1359   PetscCall(PetscOptionsGetBool(((PetscObject)mat)->options, ((PetscObject)mat)->prefix, "-matload_symmetric", &flg, NULL));
1360   if (flg) {
1361     PetscCall(MatSetOption(mat, MAT_SYMMETRIC, PETSC_TRUE));
1362     PetscCall(MatSetOption(mat, MAT_SYMMETRY_ETERNAL, PETSC_TRUE));
1363   }
1364   flg = PETSC_FALSE;
1365   PetscCall(PetscOptionsGetBool(((PetscObject)mat)->options, ((PetscObject)mat)->prefix, "-matload_spd", &flg, NULL));
1366   if (flg) PetscCall(MatSetOption(mat, MAT_SPD, PETSC_TRUE));
1367 
1368   PetscCall(PetscLogEventBegin(MAT_Load, mat, viewer, 0, 0));
1369   PetscUseTypeMethod(mat, load, viewer);
1370   PetscCall(PetscLogEventEnd(MAT_Load, mat, viewer, 0, 0));
1371   PetscFunctionReturn(PETSC_SUCCESS);
1372 }
1373 
1374 static PetscErrorCode MatDestroy_Redundant(Mat_Redundant **redundant)
1375 {
1376   Mat_Redundant *redund = *redundant;
1377 
1378   PetscFunctionBegin;
1379   if (redund) {
1380     if (redund->matseq) { /* via MatCreateSubMatrices()  */
1381       PetscCall(ISDestroy(&redund->isrow));
1382       PetscCall(ISDestroy(&redund->iscol));
1383       PetscCall(MatDestroySubMatrices(1, &redund->matseq));
1384     } else {
1385       PetscCall(PetscFree2(redund->send_rank, redund->recv_rank));
1386       PetscCall(PetscFree(redund->sbuf_j));
1387       PetscCall(PetscFree(redund->sbuf_a));
1388       for (PetscInt i = 0; i < redund->nrecvs; i++) {
1389         PetscCall(PetscFree(redund->rbuf_j[i]));
1390         PetscCall(PetscFree(redund->rbuf_a[i]));
1391       }
1392       PetscCall(PetscFree4(redund->sbuf_nz, redund->rbuf_nz, redund->rbuf_j, redund->rbuf_a));
1393     }
1394 
1395     if (redund->subcomm) PetscCall(PetscCommDestroy(&redund->subcomm));
1396     PetscCall(PetscFree(redund));
1397   }
1398   PetscFunctionReturn(PETSC_SUCCESS);
1399 }
1400 
1401 /*@
1402   MatDestroy - Frees space taken by a matrix.
1403 
1404   Collective
1405 
1406   Input Parameter:
1407 . A - the matrix
1408 
1409   Level: beginner
1410 
1411   Developer Note:
1412   Some special arrays of matrices are not destroyed in this routine but instead by the routines called by
1413   `MatDestroySubMatrices()`. Thus one must be sure that any changes here must also be made in those routines.
1414   `MatHeaderMerge()` and `MatHeaderReplace()` also manipulate the data in the `Mat` object and likely need changes
1415   if changes are needed here.
1416 
1417 .seealso: [](ch_matrices), `Mat`, `MatCreate()`
1418 @*/
1419 PetscErrorCode MatDestroy(Mat *A)
1420 {
1421   PetscFunctionBegin;
1422   if (!*A) PetscFunctionReturn(PETSC_SUCCESS);
1423   PetscValidHeaderSpecific(*A, MAT_CLASSID, 1);
1424   if (--((PetscObject)*A)->refct > 0) {
1425     *A = NULL;
1426     PetscFunctionReturn(PETSC_SUCCESS);
1427   }
1428 
1429   /* if memory was published with SAWs then destroy it */
1430   PetscCall(PetscObjectSAWsViewOff((PetscObject)*A));
1431   PetscTryTypeMethod(*A, destroy);
1432 
1433   PetscCall(PetscFree((*A)->factorprefix));
1434   PetscCall(PetscFree((*A)->defaultvectype));
1435   PetscCall(PetscFree((*A)->defaultrandtype));
1436   PetscCall(PetscFree((*A)->bsizes));
1437   PetscCall(PetscFree((*A)->solvertype));
1438   for (PetscInt i = 0; i < MAT_FACTOR_NUM_TYPES; i++) PetscCall(PetscFree((*A)->preferredordering[i]));
1439   if ((*A)->redundant && (*A)->redundant->matseq[0] == *A) (*A)->redundant->matseq[0] = NULL;
1440   PetscCall(MatDestroy_Redundant(&(*A)->redundant));
1441   PetscCall(MatProductClear(*A));
1442   PetscCall(MatNullSpaceDestroy(&(*A)->nullsp));
1443   PetscCall(MatNullSpaceDestroy(&(*A)->transnullsp));
1444   PetscCall(MatNullSpaceDestroy(&(*A)->nearnullsp));
1445   PetscCall(MatDestroy(&(*A)->schur));
1446   PetscCall(PetscLayoutDestroy(&(*A)->rmap));
1447   PetscCall(PetscLayoutDestroy(&(*A)->cmap));
1448   PetscCall(PetscHeaderDestroy(A));
1449   PetscFunctionReturn(PETSC_SUCCESS);
1450 }
1451 
1452 // PetscClangLinter pragma disable: -fdoc-section-header-unknown
1453 /*@
1454   MatSetValues - Inserts or adds a block of values into a matrix.
1455   These values may be cached, so `MatAssemblyBegin()` and `MatAssemblyEnd()`
1456   MUST be called after all calls to `MatSetValues()` have been completed.
1457 
1458   Not Collective
1459 
1460   Input Parameters:
1461 + mat  - the matrix
1462 . v    - a logically two-dimensional array of values
1463 . m    - the number of rows
1464 . idxm - the global indices of the rows
1465 . n    - the number of columns
1466 . idxn - the global indices of the columns
1467 - addv - either `ADD_VALUES` to add values to any existing entries, or `INSERT_VALUES` to replace existing entries with new values
1468 
1469   Level: beginner
1470 
1471   Notes:
1472   By default the values, `v`, are stored row-oriented. See `MatSetOption()` for other options.
1473 
1474   Calls to `MatSetValues()` with the `INSERT_VALUES` and `ADD_VALUES`
1475   options cannot be mixed without intervening calls to the assembly
1476   routines.
1477 
1478   `MatSetValues()` uses 0-based row and column numbers in Fortran
1479   as well as in C.
1480 
1481   Negative indices may be passed in `idxm` and `idxn`, these rows and columns are
1482   simply ignored. This allows easily inserting element stiffness matrices
1483   with homogeneous Dirichlet boundary conditions that you don't want represented
1484   in the matrix.
1485 
1486   Efficiency Alert:
1487   The routine `MatSetValuesBlocked()` may offer much better efficiency
1488   for users of block sparse formats (`MATSEQBAIJ` and `MATMPIBAIJ`).
1489 
1490   Fortran Notes:
1491   If any of `idxm`, `idxn`, and `v` are scalars pass them using, for example,
1492 .vb
1493   MatSetValues(mat, one, [idxm], one, [idxn], [v], INSERT_VALUES)
1494 .ve
1495 
1496   If `v` is a two-dimensional array use `reshape()` to pass it as a one dimensional array
1497 
1498   Developer Note:
1499   This is labeled with C so does not automatically generate Fortran stubs and interfaces
1500   because it requires multiple Fortran interfaces depending on which arguments are scalar or arrays.
1501 
1502 .seealso: [](ch_matrices), `Mat`, `MatSetOption()`, `MatAssemblyBegin()`, `MatAssemblyEnd()`, `MatSetValuesBlocked()`, `MatSetValuesLocal()`,
1503           `InsertMode`, `INSERT_VALUES`, `ADD_VALUES`
1504 @*/
1505 PetscErrorCode MatSetValues(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], const PetscScalar v[], InsertMode addv)
1506 {
1507   PetscFunctionBeginHot;
1508   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
1509   PetscValidType(mat, 1);
1510   if (!m || !n) PetscFunctionReturn(PETSC_SUCCESS); /* no values to insert */
1511   PetscAssertPointer(idxm, 3);
1512   PetscAssertPointer(idxn, 5);
1513   MatCheckPreallocated(mat, 1);
1514 
1515   if (mat->insertmode == NOT_SET_VALUES) mat->insertmode = addv;
1516   else PetscCheck(mat->insertmode == addv, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Cannot mix add values and insert values");
1517 
1518   if (PetscDefined(USE_DEBUG)) {
1519     PetscInt i, j;
1520 
1521     PetscCheck(!mat->factortype, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
1522     if (v) {
1523       for (i = 0; i < m; i++) {
1524         for (j = 0; j < n; j++) {
1525           if (mat->erroriffailure && PetscIsInfOrNanScalar(v[i * n + j]))
1526 #if defined(PETSC_USE_COMPLEX)
1527             SETERRQ(PETSC_COMM_SELF, PETSC_ERR_FP, "Inserting %g+i%g at matrix entry (%" PetscInt_FMT ",%" PetscInt_FMT ")", (double)PetscRealPart(v[i * n + j]), (double)PetscImaginaryPart(v[i * n + j]), idxm[i], idxn[j]);
1528 #else
1529             SETERRQ(PETSC_COMM_SELF, PETSC_ERR_FP, "Inserting %g at matrix entry (%" PetscInt_FMT ",%" PetscInt_FMT ")", (double)v[i * n + j], idxm[i], idxn[j]);
1530 #endif
1531         }
1532       }
1533     }
1534     for (i = 0; i < m; i++) PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Cannot insert in row %" PetscInt_FMT ", maximum is %" PetscInt_FMT, idxm[i], mat->rmap->N - 1);
1535     for (i = 0; i < n; i++) PetscCheck(idxn[i] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Cannot insert in column %" PetscInt_FMT ", maximum is %" PetscInt_FMT, idxn[i], mat->cmap->N - 1);
1536   }
1537 
1538   if (mat->assembled) {
1539     mat->was_assembled = PETSC_TRUE;
1540     mat->assembled     = PETSC_FALSE;
1541   }
1542   PetscCall(PetscLogEventBegin(MAT_SetValues, mat, 0, 0, 0));
1543   PetscUseTypeMethod(mat, setvalues, m, idxm, n, idxn, v, addv);
1544   PetscCall(PetscLogEventEnd(MAT_SetValues, mat, 0, 0, 0));
1545   PetscFunctionReturn(PETSC_SUCCESS);
1546 }
1547 
1548 // PetscClangLinter pragma disable: -fdoc-section-header-unknown
1549 /*@
1550   MatSetValuesIS - Inserts or adds a block of values into a matrix using an `IS` to indicate the rows and columns
1551   These values may be cached, so `MatAssemblyBegin()` and `MatAssemblyEnd()`
1552   MUST be called after all calls to `MatSetValues()` have been completed.
1553 
1554   Not Collective
1555 
1556   Input Parameters:
1557 + mat  - the matrix
1558 . v    - a logically two-dimensional array of values
1559 . ism  - the rows to provide
1560 . isn  - the columns to provide
1561 - addv - either `ADD_VALUES` to add values to any existing entries, or `INSERT_VALUES` to replace existing entries with new values
1562 
1563   Level: beginner
1564 
1565   Notes:
1566   By default the values, `v`, are stored row-oriented. See `MatSetOption()` for other options.
1567 
1568   Calls to `MatSetValues()` with the `INSERT_VALUES` and `ADD_VALUES`
1569   options cannot be mixed without intervening calls to the assembly
1570   routines.
1571 
1572   `MatSetValues()` uses 0-based row and column numbers in Fortran
1573   as well as in C.
1574 
1575   Negative indices may be passed in `ism` and `isn`, these rows and columns are
1576   simply ignored. This allows easily inserting element stiffness matrices
1577   with homogeneous Dirichlet boundary conditions that you don't want represented
1578   in the matrix.
1579 
1580   Efficiency Alert:
1581   The routine `MatSetValuesBlocked()` may offer much better efficiency
1582   for users of block sparse formats (`MATSEQBAIJ` and `MATMPIBAIJ`).
1583 
1584   This is currently not optimized for any particular `ISType`
1585 
1586   Developer Note:
1587   This is labeled with C so does not automatically generate Fortran stubs and interfaces
1588   because it requires multiple Fortran interfaces depending on which arguments are scalar or arrays.
1589 
1590 .seealso: [](ch_matrices), `Mat`, `MatSetOption()`, `MatSetValues()`, `MatAssemblyBegin()`, `MatAssemblyEnd()`, `MatSetValuesBlocked()`, `MatSetValuesLocal()`,
1591           `InsertMode`, `INSERT_VALUES`, `ADD_VALUES`
1592 @*/
1593 PetscErrorCode MatSetValuesIS(Mat mat, IS ism, IS isn, const PetscScalar v[], InsertMode addv)
1594 {
1595   PetscInt        m, n;
1596   const PetscInt *rows, *cols;
1597 
1598   PetscFunctionBeginHot;
1599   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
1600   PetscCall(ISGetIndices(ism, &rows));
1601   PetscCall(ISGetIndices(isn, &cols));
1602   PetscCall(ISGetLocalSize(ism, &m));
1603   PetscCall(ISGetLocalSize(isn, &n));
1604   PetscCall(MatSetValues(mat, m, rows, n, cols, v, addv));
1605   PetscCall(ISRestoreIndices(ism, &rows));
1606   PetscCall(ISRestoreIndices(isn, &cols));
1607   PetscFunctionReturn(PETSC_SUCCESS);
1608 }
1609 
1610 /*@
1611   MatSetValuesRowLocal - Inserts a row (block row for `MATBAIJ` matrices) of nonzero
1612   values into a matrix
1613 
1614   Not Collective
1615 
1616   Input Parameters:
1617 + mat - the matrix
1618 . row - the (block) row to set
1619 - v   - a logically two-dimensional array of values
1620 
1621   Level: intermediate
1622 
1623   Notes:
1624   The values, `v`, are column-oriented (for the block version) and sorted
1625 
1626   All the nonzero values in `row` must be provided
1627 
1628   The matrix must have previously had its column indices set, likely by having been assembled.
1629 
1630   `row` must belong to this MPI process
1631 
1632 .seealso: [](ch_matrices), `Mat`, `MatSetOption()`, `MatAssemblyBegin()`, `MatAssemblyEnd()`, `MatSetValuesBlocked()`, `MatSetValuesLocal()`,
1633           `InsertMode`, `INSERT_VALUES`, `ADD_VALUES`, `MatSetValues()`, `MatSetValuesRow()`, `MatSetLocalToGlobalMapping()`
1634 @*/
1635 PetscErrorCode MatSetValuesRowLocal(Mat mat, PetscInt row, const PetscScalar v[])
1636 {
1637   PetscInt globalrow;
1638 
1639   PetscFunctionBegin;
1640   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
1641   PetscValidType(mat, 1);
1642   PetscAssertPointer(v, 3);
1643   PetscCall(ISLocalToGlobalMappingApply(mat->rmap->mapping, 1, &row, &globalrow));
1644   PetscCall(MatSetValuesRow(mat, globalrow, v));
1645   PetscFunctionReturn(PETSC_SUCCESS);
1646 }
1647 
1648 /*@
1649   MatSetValuesRow - Inserts a row (block row for `MATBAIJ` matrices) of nonzero
1650   values into a matrix
1651 
1652   Not Collective
1653 
1654   Input Parameters:
1655 + mat - the matrix
1656 . row - the (block) row to set
1657 - v   - a logically two-dimensional (column major) array of values for  block matrices with blocksize larger than one, otherwise a one dimensional array of values
1658 
1659   Level: advanced
1660 
1661   Notes:
1662   The values, `v`, are column-oriented for the block version.
1663 
1664   All the nonzeros in `row` must be provided
1665 
1666   THE MATRIX MUST HAVE PREVIOUSLY HAD ITS COLUMN INDICES SET. IT IS RARE THAT THIS ROUTINE IS USED, usually `MatSetValues()` is used.
1667 
1668   `row` must belong to this process
1669 
1670 .seealso: [](ch_matrices), `Mat`, `MatSetValues()`, `MatSetOption()`, `MatAssemblyBegin()`, `MatAssemblyEnd()`, `MatSetValuesBlocked()`, `MatSetValuesLocal()`,
1671           `InsertMode`, `INSERT_VALUES`, `ADD_VALUES`
1672 @*/
1673 PetscErrorCode MatSetValuesRow(Mat mat, PetscInt row, const PetscScalar v[])
1674 {
1675   PetscFunctionBeginHot;
1676   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
1677   PetscValidType(mat, 1);
1678   MatCheckPreallocated(mat, 1);
1679   PetscAssertPointer(v, 3);
1680   PetscCheck(mat->insertmode != ADD_VALUES, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Cannot mix add and insert values");
1681   PetscCheck(!mat->factortype, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
1682   mat->insertmode = INSERT_VALUES;
1683 
1684   if (mat->assembled) {
1685     mat->was_assembled = PETSC_TRUE;
1686     mat->assembled     = PETSC_FALSE;
1687   }
1688   PetscCall(PetscLogEventBegin(MAT_SetValues, mat, 0, 0, 0));
1689   PetscUseTypeMethod(mat, setvaluesrow, row, v);
1690   PetscCall(PetscLogEventEnd(MAT_SetValues, mat, 0, 0, 0));
1691   PetscFunctionReturn(PETSC_SUCCESS);
1692 }
1693 
1694 // PetscClangLinter pragma disable: -fdoc-section-header-unknown
1695 /*@
1696   MatSetValuesStencil - Inserts or adds a block of values into a matrix.
1697   Using structured grid indexing
1698 
1699   Not Collective
1700 
1701   Input Parameters:
1702 + mat  - the matrix
1703 . m    - number of rows being entered
1704 . idxm - grid coordinates (and component number when dof > 1) for matrix rows being entered
1705 . n    - number of columns being entered
1706 . idxn - grid coordinates (and component number when dof > 1) for matrix columns being entered
1707 . v    - a logically two-dimensional array of values
1708 - addv - either `ADD_VALUES` to add to existing entries at that location or `INSERT_VALUES` to replace existing entries with new values
1709 
1710   Level: beginner
1711 
1712   Notes:
1713   By default the values, `v`, are row-oriented.  See `MatSetOption()` for other options.
1714 
1715   Calls to `MatSetValuesStencil()` with the `INSERT_VALUES` and `ADD_VALUES`
1716   options cannot be mixed without intervening calls to the assembly
1717   routines.
1718 
1719   The grid coordinates are across the entire grid, not just the local portion
1720 
1721   `MatSetValuesStencil()` uses 0-based row and column numbers in Fortran
1722   as well as in C.
1723 
1724   For setting/accessing vector values via array coordinates you can use the `DMDAVecGetArray()` routine
1725 
1726   In order to use this routine you must either obtain the matrix with `DMCreateMatrix()`
1727   or call `MatSetLocalToGlobalMapping()` and `MatSetStencil()` first.
1728 
1729   The columns and rows in the stencil passed in MUST be contained within the
1730   ghost region of the given process as set with DMDACreateXXX() or `MatSetStencil()`. For example,
1731   if you create a `DMDA` with an overlap of one grid level and on a particular process its first
1732   local nonghost x logical coordinate is 6 (so its first ghost x logical coordinate is 5) the
1733   first i index you can use in your column and row indices in `MatSetStencil()` is 5.
1734 
1735   For periodic boundary conditions use negative indices for values to the left (below 0; that are to be
1736   obtained by wrapping values from right edge). For values to the right of the last entry using that index plus one
1737   etc to obtain values that obtained by wrapping the values from the left edge. This does not work for anything but the
1738   `DM_BOUNDARY_PERIODIC` boundary type.
1739 
1740   For indices that don't mean anything for your case (like the k index when working in 2d) or the c index when you have
1741   a single value per point) you can skip filling those indices.
1742 
1743   Inspired by the structured grid interface to the HYPRE package
1744   (https://computation.llnl.gov/projects/hypre-scalable-linear-solvers-multigrid-methods)
1745 
1746   Efficiency Alert:
1747   The routine `MatSetValuesBlockedStencil()` may offer much better efficiency
1748   for users of block sparse formats (`MATSEQBAIJ` and `MATMPIBAIJ`).
1749 
1750   Fortran Note:
1751   `idxm` and `idxn` should be declared as
1752 $     MatStencil idxm(4,m),idxn(4,n)
1753   and the values inserted using
1754 .vb
1755     idxm(MatStencil_i,1) = i
1756     idxm(MatStencil_j,1) = j
1757     idxm(MatStencil_k,1) = k
1758     idxm(MatStencil_c,1) = c
1759     etc
1760 .ve
1761 
1762 .seealso: [](ch_matrices), `Mat`, `DMDA`, `MatSetOption()`, `MatAssemblyBegin()`, `MatAssemblyEnd()`, `MatSetValuesBlocked()`, `MatSetValuesLocal()`
1763           `MatSetValues()`, `MatSetValuesBlockedStencil()`, `MatSetStencil()`, `DMCreateMatrix()`, `DMDAVecGetArray()`, `MatStencil`
1764 @*/
1765 PetscErrorCode MatSetValuesStencil(Mat mat, PetscInt m, const MatStencil idxm[], PetscInt n, const MatStencil idxn[], const PetscScalar v[], InsertMode addv)
1766 {
1767   PetscInt  buf[8192], *bufm = NULL, *bufn = NULL, *jdxm, *jdxn;
1768   PetscInt  j, i, dim = mat->stencil.dim, *dims = mat->stencil.dims + 1, tmp;
1769   PetscInt *starts = mat->stencil.starts, *dxm = (PetscInt *)idxm, *dxn = (PetscInt *)idxn, sdim = dim - (1 - (PetscInt)mat->stencil.noc);
1770 
1771   PetscFunctionBegin;
1772   if (!m || !n) PetscFunctionReturn(PETSC_SUCCESS); /* no values to insert */
1773   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
1774   PetscValidType(mat, 1);
1775   PetscAssertPointer(idxm, 3);
1776   PetscAssertPointer(idxn, 5);
1777 
1778   if ((m + n) <= (PetscInt)PETSC_STATIC_ARRAY_LENGTH(buf)) {
1779     jdxm = buf;
1780     jdxn = buf + m;
1781   } else {
1782     PetscCall(PetscMalloc2(m, &bufm, n, &bufn));
1783     jdxm = bufm;
1784     jdxn = bufn;
1785   }
1786   for (i = 0; i < m; i++) {
1787     for (j = 0; j < 3 - sdim; j++) dxm++;
1788     tmp = *dxm++ - starts[0];
1789     for (j = 0; j < dim - 1; j++) {
1790       if ((*dxm++ - starts[j + 1]) < 0 || tmp < 0) tmp = -1;
1791       else tmp = tmp * dims[j] + *(dxm - 1) - starts[j + 1];
1792     }
1793     if (mat->stencil.noc) dxm++;
1794     jdxm[i] = tmp;
1795   }
1796   for (i = 0; i < n; i++) {
1797     for (j = 0; j < 3 - sdim; j++) dxn++;
1798     tmp = *dxn++ - starts[0];
1799     for (j = 0; j < dim - 1; j++) {
1800       if ((*dxn++ - starts[j + 1]) < 0 || tmp < 0) tmp = -1;
1801       else tmp = tmp * dims[j] + *(dxn - 1) - starts[j + 1];
1802     }
1803     if (mat->stencil.noc) dxn++;
1804     jdxn[i] = tmp;
1805   }
1806   PetscCall(MatSetValuesLocal(mat, m, jdxm, n, jdxn, v, addv));
1807   PetscCall(PetscFree2(bufm, bufn));
1808   PetscFunctionReturn(PETSC_SUCCESS);
1809 }
1810 
1811 /*@
1812   MatSetValuesBlockedStencil - Inserts or adds a block of values into a matrix.
1813   Using structured grid indexing
1814 
1815   Not Collective
1816 
1817   Input Parameters:
1818 + mat  - the matrix
1819 . m    - number of rows being entered
1820 . idxm - grid coordinates for matrix rows being entered
1821 . n    - number of columns being entered
1822 . idxn - grid coordinates for matrix columns being entered
1823 . v    - a logically two-dimensional array of values
1824 - addv - either `ADD_VALUES` to add to existing entries or `INSERT_VALUES` to replace existing entries with new values
1825 
1826   Level: beginner
1827 
1828   Notes:
1829   By default the values, `v`, are row-oriented and unsorted.
1830   See `MatSetOption()` for other options.
1831 
1832   Calls to `MatSetValuesBlockedStencil()` with the `INSERT_VALUES` and `ADD_VALUES`
1833   options cannot be mixed without intervening calls to the assembly
1834   routines.
1835 
1836   The grid coordinates are across the entire grid, not just the local portion
1837 
1838   `MatSetValuesBlockedStencil()` uses 0-based row and column numbers in Fortran
1839   as well as in C.
1840 
1841   For setting/accessing vector values via array coordinates you can use the `DMDAVecGetArray()` routine
1842 
1843   In order to use this routine you must either obtain the matrix with `DMCreateMatrix()`
1844   or call `MatSetBlockSize()`, `MatSetLocalToGlobalMapping()` and `MatSetStencil()` first.
1845 
1846   The columns and rows in the stencil passed in MUST be contained within the
1847   ghost region of the given process as set with DMDACreateXXX() or `MatSetStencil()`. For example,
1848   if you create a `DMDA` with an overlap of one grid level and on a particular process its first
1849   local nonghost x logical coordinate is 6 (so its first ghost x logical coordinate is 5) the
1850   first i index you can use in your column and row indices in `MatSetStencil()` is 5.
1851 
1852   Negative indices may be passed in idxm and idxn, these rows and columns are
1853   simply ignored. This allows easily inserting element stiffness matrices
1854   with homogeneous Dirichlet boundary conditions that you don't want represented
1855   in the matrix.
1856 
1857   Inspired by the structured grid interface to the HYPRE package
1858   (https://computation.llnl.gov/projects/hypre-scalable-linear-solvers-multigrid-methods)
1859 
1860   Fortran Note:
1861   `idxm` and `idxn` should be declared as
1862 $     MatStencil idxm(4,m),idxn(4,n)
1863   and the values inserted using
1864 .vb
1865     idxm(MatStencil_i,1) = i
1866     idxm(MatStencil_j,1) = j
1867     idxm(MatStencil_k,1) = k
1868    etc
1869 .ve
1870 
1871 .seealso: [](ch_matrices), `Mat`, `DMDA`, `MatSetOption()`, `MatAssemblyBegin()`, `MatAssemblyEnd()`, `MatSetValuesBlocked()`, `MatSetValuesLocal()`
1872           `MatSetValues()`, `MatSetValuesStencil()`, `MatSetStencil()`, `DMCreateMatrix()`, `DMDAVecGetArray()`, `MatStencil`,
1873           `MatSetBlockSize()`, `MatSetLocalToGlobalMapping()`
1874 @*/
1875 PetscErrorCode MatSetValuesBlockedStencil(Mat mat, PetscInt m, const MatStencil idxm[], PetscInt n, const MatStencil idxn[], const PetscScalar v[], InsertMode addv)
1876 {
1877   PetscInt  buf[8192], *bufm = NULL, *bufn = NULL, *jdxm, *jdxn;
1878   PetscInt  j, i, dim = mat->stencil.dim, *dims = mat->stencil.dims + 1, tmp;
1879   PetscInt *starts = mat->stencil.starts, *dxm = (PetscInt *)idxm, *dxn = (PetscInt *)idxn, sdim = dim - (1 - (PetscInt)mat->stencil.noc);
1880 
1881   PetscFunctionBegin;
1882   if (!m || !n) PetscFunctionReturn(PETSC_SUCCESS); /* no values to insert */
1883   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
1884   PetscValidType(mat, 1);
1885   PetscAssertPointer(idxm, 3);
1886   PetscAssertPointer(idxn, 5);
1887   PetscAssertPointer(v, 6);
1888 
1889   if ((m + n) <= (PetscInt)PETSC_STATIC_ARRAY_LENGTH(buf)) {
1890     jdxm = buf;
1891     jdxn = buf + m;
1892   } else {
1893     PetscCall(PetscMalloc2(m, &bufm, n, &bufn));
1894     jdxm = bufm;
1895     jdxn = bufn;
1896   }
1897   for (i = 0; i < m; i++) {
1898     for (j = 0; j < 3 - sdim; j++) dxm++;
1899     tmp = *dxm++ - starts[0];
1900     for (j = 0; j < sdim - 1; j++) {
1901       if ((*dxm++ - starts[j + 1]) < 0 || tmp < 0) tmp = -1;
1902       else tmp = tmp * dims[j] + *(dxm - 1) - starts[j + 1];
1903     }
1904     dxm++;
1905     jdxm[i] = tmp;
1906   }
1907   for (i = 0; i < n; i++) {
1908     for (j = 0; j < 3 - sdim; j++) dxn++;
1909     tmp = *dxn++ - starts[0];
1910     for (j = 0; j < sdim - 1; j++) {
1911       if ((*dxn++ - starts[j + 1]) < 0 || tmp < 0) tmp = -1;
1912       else tmp = tmp * dims[j] + *(dxn - 1) - starts[j + 1];
1913     }
1914     dxn++;
1915     jdxn[i] = tmp;
1916   }
1917   PetscCall(MatSetValuesBlockedLocal(mat, m, jdxm, n, jdxn, v, addv));
1918   PetscCall(PetscFree2(bufm, bufn));
1919   PetscFunctionReturn(PETSC_SUCCESS);
1920 }
1921 
1922 /*@
1923   MatSetStencil - Sets the grid information for setting values into a matrix via
1924   `MatSetValuesStencil()`
1925 
1926   Not Collective
1927 
1928   Input Parameters:
1929 + mat    - the matrix
1930 . dim    - dimension of the grid 1, 2, or 3
1931 . dims   - number of grid points in x, y, and z direction, including ghost points on your processor
1932 . starts - starting point of ghost nodes on your processor in x, y, and z direction
1933 - dof    - number of degrees of freedom per node
1934 
1935   Level: beginner
1936 
1937   Notes:
1938   Inspired by the structured grid interface to the HYPRE package
1939   (www.llnl.gov/CASC/hyper)
1940 
1941   For matrices generated with `DMCreateMatrix()` this routine is automatically called and so not needed by the
1942   user.
1943 
1944 .seealso: [](ch_matrices), `Mat`, `MatStencil`, `MatSetOption()`, `MatAssemblyBegin()`, `MatAssemblyEnd()`, `MatSetValuesBlocked()`, `MatSetValuesLocal()`
1945           `MatSetValues()`, `MatSetValuesBlockedStencil()`, `MatSetValuesStencil()`
1946 @*/
1947 PetscErrorCode MatSetStencil(Mat mat, PetscInt dim, const PetscInt dims[], const PetscInt starts[], PetscInt dof)
1948 {
1949   PetscFunctionBegin;
1950   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
1951   PetscAssertPointer(dims, 3);
1952   PetscAssertPointer(starts, 4);
1953 
1954   mat->stencil.dim = dim + (dof > 1);
1955   for (PetscInt i = 0; i < dim; i++) {
1956     mat->stencil.dims[i]   = dims[dim - i - 1]; /* copy the values in backwards */
1957     mat->stencil.starts[i] = starts[dim - i - 1];
1958   }
1959   mat->stencil.dims[dim]   = dof;
1960   mat->stencil.starts[dim] = 0;
1961   mat->stencil.noc         = (PetscBool)(dof == 1);
1962   PetscFunctionReturn(PETSC_SUCCESS);
1963 }
1964 
1965 /*@
1966   MatSetValuesBlocked - Inserts or adds a block of values into a matrix.
1967 
1968   Not Collective
1969 
1970   Input Parameters:
1971 + mat  - the matrix
1972 . v    - a logically two-dimensional array of values
1973 . m    - the number of block rows
1974 . idxm - the global block indices
1975 . n    - the number of block columns
1976 . idxn - the global block indices
1977 - addv - either `ADD_VALUES` to add values to any existing entries, or `INSERT_VALUES` replaces existing entries with new values
1978 
1979   Level: intermediate
1980 
1981   Notes:
1982   If you create the matrix yourself (that is not with a call to `DMCreateMatrix()`) then you MUST call
1983   MatXXXXSetPreallocation() or `MatSetUp()` before using this routine.
1984 
1985   The `m` and `n` count the NUMBER of blocks in the row direction and column direction,
1986   NOT the total number of rows/columns; for example, if the block size is 2 and
1987   you are passing in values for rows 2,3,4,5  then `m` would be 2 (not 4).
1988   The values in `idxm` would be 1 2; that is the first index for each block divided by
1989   the block size.
1990 
1991   You must call `MatSetBlockSize()` when constructing this matrix (before
1992   preallocating it).
1993 
1994   By default the values, `v`, are row-oriented, so the layout of
1995   `v` is the same as for `MatSetValues()`. See `MatSetOption()` for other options.
1996 
1997   Calls to `MatSetValuesBlocked()` with the `INSERT_VALUES` and `ADD_VALUES`
1998   options cannot be mixed without intervening calls to the assembly
1999   routines.
2000 
2001   `MatSetValuesBlocked()` uses 0-based row and column numbers in Fortran
2002   as well as in C.
2003 
2004   Negative indices may be passed in `idxm` and `idxn`, these rows and columns are
2005   simply ignored. This allows easily inserting element stiffness matrices
2006   with homogeneous Dirichlet boundary conditions that you don't want represented
2007   in the matrix.
2008 
2009   Each time an entry is set within a sparse matrix via `MatSetValues()`,
2010   internal searching must be done to determine where to place the
2011   data in the matrix storage space.  By instead inserting blocks of
2012   entries via `MatSetValuesBlocked()`, the overhead of matrix assembly is
2013   reduced.
2014 
2015   Example:
2016 .vb
2017    Suppose m=n=2 and block size(bs) = 2 The array is
2018 
2019    1  2  | 3  4
2020    5  6  | 7  8
2021    - - - | - - -
2022    9  10 | 11 12
2023    13 14 | 15 16
2024 
2025    v[] should be passed in like
2026    v[] = [1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16]
2027 
2028   If you are not using row-oriented storage of v (that is you called MatSetOption(mat,MAT_ROW_ORIENTED,PETSC_FALSE)) then
2029    v[] = [1,5,9,13,2,6,10,14,3,7,11,15,4,8,12,16]
2030 .ve
2031 
2032   Fortran Notes:
2033   If any of `idmx`, `idxn`, and `v` are scalars pass them using, for example,
2034 .vb
2035   MatSetValuesBlocked(mat, one, [idxm], one, [idxn], [v], INSERT_VALUES)
2036 .ve
2037 
2038   If `v` is a two-dimensional array use `reshape()` to pass it as a one dimensional array
2039 
2040 .seealso: [](ch_matrices), `Mat`, `MatSetBlockSize()`, `MatSetOption()`, `MatAssemblyBegin()`, `MatAssemblyEnd()`, `MatSetValues()`, `MatSetValuesBlockedLocal()`
2041 @*/
2042 PetscErrorCode MatSetValuesBlocked(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], const PetscScalar v[], InsertMode addv)
2043 {
2044   PetscFunctionBeginHot;
2045   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
2046   PetscValidType(mat, 1);
2047   if (!m || !n) PetscFunctionReturn(PETSC_SUCCESS); /* no values to insert */
2048   PetscAssertPointer(idxm, 3);
2049   PetscAssertPointer(idxn, 5);
2050   MatCheckPreallocated(mat, 1);
2051   if (mat->insertmode == NOT_SET_VALUES) mat->insertmode = addv;
2052   else PetscCheck(mat->insertmode == addv, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Cannot mix add values and insert values");
2053   if (PetscDefined(USE_DEBUG)) {
2054     PetscCheck(!mat->factortype, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
2055     PetscCheck(mat->ops->setvaluesblocked || mat->ops->setvalues, PETSC_COMM_SELF, PETSC_ERR_SUP, "Mat type %s", ((PetscObject)mat)->type_name);
2056   }
2057   if (PetscDefined(USE_DEBUG)) {
2058     PetscInt rbs, cbs, M, N, i;
2059     PetscCall(MatGetBlockSizes(mat, &rbs, &cbs));
2060     PetscCall(MatGetSize(mat, &M, &N));
2061     for (i = 0; i < m; i++) PetscCheck(idxm[i] * rbs < M, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row block %" PetscInt_FMT " contains an index %" PetscInt_FMT "*%" PetscInt_FMT " greater than row length %" PetscInt_FMT, i, idxm[i], rbs, M);
2062     for (i = 0; i < n; i++)
2063       PetscCheck(idxn[i] * cbs < N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column block %" PetscInt_FMT " contains an index %" PetscInt_FMT "*%" PetscInt_FMT " greater than column length %" PetscInt_FMT, i, idxn[i], cbs, N);
2064   }
2065   if (mat->assembled) {
2066     mat->was_assembled = PETSC_TRUE;
2067     mat->assembled     = PETSC_FALSE;
2068   }
2069   PetscCall(PetscLogEventBegin(MAT_SetValues, mat, 0, 0, 0));
2070   if (mat->ops->setvaluesblocked) {
2071     PetscUseTypeMethod(mat, setvaluesblocked, m, idxm, n, idxn, v, addv);
2072   } else {
2073     PetscInt buf[8192], *bufr = NULL, *bufc = NULL, *iidxm, *iidxn;
2074     PetscInt i, j, bs, cbs;
2075 
2076     PetscCall(MatGetBlockSizes(mat, &bs, &cbs));
2077     if ((m * bs + n * cbs) <= (PetscInt)PETSC_STATIC_ARRAY_LENGTH(buf)) {
2078       iidxm = buf;
2079       iidxn = buf + m * bs;
2080     } else {
2081       PetscCall(PetscMalloc2(m * bs, &bufr, n * cbs, &bufc));
2082       iidxm = bufr;
2083       iidxn = bufc;
2084     }
2085     for (i = 0; i < m; i++) {
2086       for (j = 0; j < bs; j++) iidxm[i * bs + j] = bs * idxm[i] + j;
2087     }
2088     if (m != n || bs != cbs || idxm != idxn) {
2089       for (i = 0; i < n; i++) {
2090         for (j = 0; j < cbs; j++) iidxn[i * cbs + j] = cbs * idxn[i] + j;
2091       }
2092     } else iidxn = iidxm;
2093     PetscCall(MatSetValues(mat, m * bs, iidxm, n * cbs, iidxn, v, addv));
2094     PetscCall(PetscFree2(bufr, bufc));
2095   }
2096   PetscCall(PetscLogEventEnd(MAT_SetValues, mat, 0, 0, 0));
2097   PetscFunctionReturn(PETSC_SUCCESS);
2098 }
2099 
2100 /*@
2101   MatGetValues - Gets a block of local values from a matrix.
2102 
2103   Not Collective; can only return values that are owned by the give process
2104 
2105   Input Parameters:
2106 + mat  - the matrix
2107 . v    - a logically two-dimensional array for storing the values
2108 . m    - the number of rows
2109 . idxm - the  global indices of the rows
2110 . n    - the number of columns
2111 - idxn - the global indices of the columns
2112 
2113   Level: advanced
2114 
2115   Notes:
2116   The user must allocate space (m*n `PetscScalar`s) for the values, `v`.
2117   The values, `v`, are then returned in a row-oriented format,
2118   analogous to that used by default in `MatSetValues()`.
2119 
2120   `MatGetValues()` uses 0-based row and column numbers in
2121   Fortran as well as in C.
2122 
2123   `MatGetValues()` requires that the matrix has been assembled
2124   with `MatAssemblyBegin()`/`MatAssemblyEnd()`.  Thus, calls to
2125   `MatSetValues()` and `MatGetValues()` CANNOT be made in succession
2126   without intermediate matrix assembly.
2127 
2128   Negative row or column indices will be ignored and those locations in `v` will be
2129   left unchanged.
2130 
2131   For the standard row-based matrix formats, `idxm` can only contain rows owned by the requesting MPI process.
2132   That is, rows with global index greater than or equal to rstart and less than rend where rstart and rend are obtainable
2133   from `MatGetOwnershipRange`(mat,&rstart,&rend).
2134 
2135 .seealso: [](ch_matrices), `Mat`, `MatGetRow()`, `MatCreateSubMatrices()`, `MatSetValues()`, `MatGetOwnershipRange()`, `MatGetValuesLocal()`, `MatGetValue()`
2136 @*/
2137 PetscErrorCode MatGetValues(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], PetscScalar v[])
2138 {
2139   PetscFunctionBegin;
2140   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
2141   PetscValidType(mat, 1);
2142   if (!m || !n) PetscFunctionReturn(PETSC_SUCCESS);
2143   PetscAssertPointer(idxm, 3);
2144   PetscAssertPointer(idxn, 5);
2145   PetscAssertPointer(v, 6);
2146   PetscCheck(mat->assembled, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
2147   PetscCheck(!mat->factortype, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
2148   MatCheckPreallocated(mat, 1);
2149 
2150   PetscCall(PetscLogEventBegin(MAT_GetValues, mat, 0, 0, 0));
2151   PetscUseTypeMethod(mat, getvalues, m, idxm, n, idxn, v);
2152   PetscCall(PetscLogEventEnd(MAT_GetValues, mat, 0, 0, 0));
2153   PetscFunctionReturn(PETSC_SUCCESS);
2154 }
2155 
2156 /*@
2157   MatGetValuesLocal - retrieves values from certain locations in a matrix using the local numbering of the indices
2158   defined previously by `MatSetLocalToGlobalMapping()`
2159 
2160   Not Collective
2161 
2162   Input Parameters:
2163 + mat  - the matrix
2164 . nrow - number of rows
2165 . irow - the row local indices
2166 . ncol - number of columns
2167 - icol - the column local indices
2168 
2169   Output Parameter:
2170 . y - a logically two-dimensional array of values
2171 
2172   Level: advanced
2173 
2174   Notes:
2175   If you create the matrix yourself (that is not with a call to `DMCreateMatrix()`) then you MUST call `MatSetLocalToGlobalMapping()` before using this routine.
2176 
2177   This routine can only return values that are owned by the requesting MPI process. That is, for standard matrix formats, rows that, in the global numbering,
2178   are greater than or equal to rstart and less than rend where rstart and rend are obtainable from `MatGetOwnershipRange`(mat,&rstart,&rend). One can
2179   determine if the resulting global row associated with the local row r is owned by the requesting MPI process by applying the `ISLocalToGlobalMapping` set
2180   with `MatSetLocalToGlobalMapping()`.
2181 
2182   Developer Note:
2183   This is labelled with C so does not automatically generate Fortran stubs and interfaces
2184   because it requires multiple Fortran interfaces depending on which arguments are scalar or arrays.
2185 
2186 .seealso: [](ch_matrices), `Mat`, `MatAssemblyBegin()`, `MatAssemblyEnd()`, `MatSetValues()`, `MatSetLocalToGlobalMapping()`,
2187           `MatSetValuesLocal()`, `MatGetValues()`
2188 @*/
2189 PetscErrorCode MatGetValuesLocal(Mat mat, PetscInt nrow, const PetscInt irow[], PetscInt ncol, const PetscInt icol[], PetscScalar y[])
2190 {
2191   PetscFunctionBeginHot;
2192   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
2193   PetscValidType(mat, 1);
2194   MatCheckPreallocated(mat, 1);
2195   if (!nrow || !ncol) PetscFunctionReturn(PETSC_SUCCESS); /* no values to retrieve */
2196   PetscAssertPointer(irow, 3);
2197   PetscAssertPointer(icol, 5);
2198   if (PetscDefined(USE_DEBUG)) {
2199     PetscCheck(!mat->factortype, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
2200     PetscCheck(mat->ops->getvalueslocal || mat->ops->getvalues, PETSC_COMM_SELF, PETSC_ERR_SUP, "Mat type %s", ((PetscObject)mat)->type_name);
2201   }
2202   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
2203   PetscCall(PetscLogEventBegin(MAT_GetValues, mat, 0, 0, 0));
2204   if (mat->ops->getvalueslocal) PetscUseTypeMethod(mat, getvalueslocal, nrow, irow, ncol, icol, y);
2205   else {
2206     PetscInt buf[8192], *bufr = NULL, *bufc = NULL, *irowm, *icolm;
2207     if ((nrow + ncol) <= (PetscInt)PETSC_STATIC_ARRAY_LENGTH(buf)) {
2208       irowm = buf;
2209       icolm = buf + nrow;
2210     } else {
2211       PetscCall(PetscMalloc2(nrow, &bufr, ncol, &bufc));
2212       irowm = bufr;
2213       icolm = bufc;
2214     }
2215     PetscCheck(mat->rmap->mapping, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "MatGetValuesLocal() cannot proceed without local-to-global row mapping (See MatSetLocalToGlobalMapping()).");
2216     PetscCheck(mat->cmap->mapping, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "MatGetValuesLocal() cannot proceed without local-to-global column mapping (See MatSetLocalToGlobalMapping()).");
2217     PetscCall(ISLocalToGlobalMappingApply(mat->rmap->mapping, nrow, irow, irowm));
2218     PetscCall(ISLocalToGlobalMappingApply(mat->cmap->mapping, ncol, icol, icolm));
2219     PetscCall(MatGetValues(mat, nrow, irowm, ncol, icolm, y));
2220     PetscCall(PetscFree2(bufr, bufc));
2221   }
2222   PetscCall(PetscLogEventEnd(MAT_GetValues, mat, 0, 0, 0));
2223   PetscFunctionReturn(PETSC_SUCCESS);
2224 }
2225 
2226 /*@
2227   MatSetValuesBatch - Adds (`ADD_VALUES`) many blocks of values into a matrix at once. The blocks must all be square and
2228   the same size. Currently, this can only be called once and creates the given matrix.
2229 
2230   Not Collective
2231 
2232   Input Parameters:
2233 + mat  - the matrix
2234 . nb   - the number of blocks
2235 . bs   - the number of rows (and columns) in each block
2236 . rows - a concatenation of the rows for each block
2237 - v    - a concatenation of logically two-dimensional arrays of values
2238 
2239   Level: advanced
2240 
2241   Notes:
2242   `MatSetPreallocationCOO()` and `MatSetValuesCOO()` may be a better way to provide the values
2243 
2244   In the future, we will extend this routine to handle rectangular blocks, and to allow multiple calls for a given matrix.
2245 
2246 .seealso: [](ch_matrices), `Mat`, `MatSetOption()`, `MatAssemblyBegin()`, `MatAssemblyEnd()`, `MatSetValuesBlocked()`, `MatSetValuesLocal()`,
2247           `InsertMode`, `INSERT_VALUES`, `ADD_VALUES`, `MatSetValues()`, `MatSetPreallocationCOO()`, `MatSetValuesCOO()`
2248 @*/
2249 PetscErrorCode MatSetValuesBatch(Mat mat, PetscInt nb, PetscInt bs, PetscInt rows[], const PetscScalar v[])
2250 {
2251   PetscFunctionBegin;
2252   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
2253   PetscValidType(mat, 1);
2254   PetscAssertPointer(rows, 4);
2255   PetscAssertPointer(v, 5);
2256   PetscAssert(!mat->factortype, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
2257 
2258   PetscCall(PetscLogEventBegin(MAT_SetValuesBatch, mat, 0, 0, 0));
2259   if (mat->ops->setvaluesbatch) PetscUseTypeMethod(mat, setvaluesbatch, nb, bs, rows, v);
2260   else {
2261     for (PetscInt b = 0; b < nb; ++b) PetscCall(MatSetValues(mat, bs, &rows[b * bs], bs, &rows[b * bs], &v[b * bs * bs], ADD_VALUES));
2262   }
2263   PetscCall(PetscLogEventEnd(MAT_SetValuesBatch, mat, 0, 0, 0));
2264   PetscFunctionReturn(PETSC_SUCCESS);
2265 }
2266 
2267 /*@
2268   MatSetLocalToGlobalMapping - Sets a local-to-global numbering for use by
2269   the routine `MatSetValuesLocal()` to allow users to insert matrix entries
2270   using a local (per-processor) numbering.
2271 
2272   Not Collective
2273 
2274   Input Parameters:
2275 + x        - the matrix
2276 . rmapping - row mapping created with `ISLocalToGlobalMappingCreate()` or `ISLocalToGlobalMappingCreateIS()`
2277 - cmapping - column mapping
2278 
2279   Level: intermediate
2280 
2281   Note:
2282   If the matrix is obtained with `DMCreateMatrix()` then this may already have been called on the matrix
2283 
2284 .seealso: [](ch_matrices), `Mat`, `DM`, `DMCreateMatrix()`, `MatGetLocalToGlobalMapping()`, `MatAssemblyBegin()`, `MatAssemblyEnd()`, `MatSetValues()`, `MatSetValuesLocal()`, `MatGetValuesLocal()`
2285 @*/
2286 PetscErrorCode MatSetLocalToGlobalMapping(Mat x, ISLocalToGlobalMapping rmapping, ISLocalToGlobalMapping cmapping)
2287 {
2288   PetscFunctionBegin;
2289   PetscValidHeaderSpecific(x, MAT_CLASSID, 1);
2290   PetscValidType(x, 1);
2291   if (rmapping) PetscValidHeaderSpecific(rmapping, IS_LTOGM_CLASSID, 2);
2292   if (cmapping) PetscValidHeaderSpecific(cmapping, IS_LTOGM_CLASSID, 3);
2293   if (x->ops->setlocaltoglobalmapping) PetscUseTypeMethod(x, setlocaltoglobalmapping, rmapping, cmapping);
2294   else {
2295     PetscCall(PetscLayoutSetISLocalToGlobalMapping(x->rmap, rmapping));
2296     PetscCall(PetscLayoutSetISLocalToGlobalMapping(x->cmap, cmapping));
2297   }
2298   PetscFunctionReturn(PETSC_SUCCESS);
2299 }
2300 
2301 /*@
2302   MatGetLocalToGlobalMapping - Gets the local-to-global numbering set by `MatSetLocalToGlobalMapping()`
2303 
2304   Not Collective
2305 
2306   Input Parameter:
2307 . A - the matrix
2308 
2309   Output Parameters:
2310 + rmapping - row mapping
2311 - cmapping - column mapping
2312 
2313   Level: advanced
2314 
2315 .seealso: [](ch_matrices), `Mat`, `MatSetLocalToGlobalMapping()`, `MatSetValuesLocal()`
2316 @*/
2317 PetscErrorCode MatGetLocalToGlobalMapping(Mat A, ISLocalToGlobalMapping *rmapping, ISLocalToGlobalMapping *cmapping)
2318 {
2319   PetscFunctionBegin;
2320   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
2321   PetscValidType(A, 1);
2322   if (rmapping) {
2323     PetscAssertPointer(rmapping, 2);
2324     *rmapping = A->rmap->mapping;
2325   }
2326   if (cmapping) {
2327     PetscAssertPointer(cmapping, 3);
2328     *cmapping = A->cmap->mapping;
2329   }
2330   PetscFunctionReturn(PETSC_SUCCESS);
2331 }
2332 
2333 /*@
2334   MatSetLayouts - Sets the `PetscLayout` objects for rows and columns of a matrix
2335 
2336   Logically Collective
2337 
2338   Input Parameters:
2339 + A    - the matrix
2340 . rmap - row layout
2341 - cmap - column layout
2342 
2343   Level: advanced
2344 
2345   Note:
2346   The `PetscLayout` objects are usually created automatically for the matrix so this routine rarely needs to be called.
2347 
2348 .seealso: [](ch_matrices), `Mat`, `PetscLayout`, `MatCreateVecs()`, `MatGetLocalToGlobalMapping()`, `MatGetLayouts()`
2349 @*/
2350 PetscErrorCode MatSetLayouts(Mat A, PetscLayout rmap, PetscLayout cmap)
2351 {
2352   PetscFunctionBegin;
2353   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
2354   PetscCall(PetscLayoutReference(rmap, &A->rmap));
2355   PetscCall(PetscLayoutReference(cmap, &A->cmap));
2356   PetscFunctionReturn(PETSC_SUCCESS);
2357 }
2358 
2359 /*@
2360   MatGetLayouts - Gets the `PetscLayout` objects for rows and columns
2361 
2362   Not Collective
2363 
2364   Input Parameter:
2365 . A - the matrix
2366 
2367   Output Parameters:
2368 + rmap - row layout
2369 - cmap - column layout
2370 
2371   Level: advanced
2372 
2373 .seealso: [](ch_matrices), `Mat`, [Matrix Layouts](sec_matlayout), `PetscLayout`, `MatCreateVecs()`, `MatGetLocalToGlobalMapping()`, `MatSetLayouts()`
2374 @*/
2375 PetscErrorCode MatGetLayouts(Mat A, PetscLayout *rmap, PetscLayout *cmap)
2376 {
2377   PetscFunctionBegin;
2378   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
2379   PetscValidType(A, 1);
2380   if (rmap) {
2381     PetscAssertPointer(rmap, 2);
2382     *rmap = A->rmap;
2383   }
2384   if (cmap) {
2385     PetscAssertPointer(cmap, 3);
2386     *cmap = A->cmap;
2387   }
2388   PetscFunctionReturn(PETSC_SUCCESS);
2389 }
2390 
2391 /*@
2392   MatSetValuesLocal - Inserts or adds values into certain locations of a matrix,
2393   using a local numbering of the rows and columns.
2394 
2395   Not Collective
2396 
2397   Input Parameters:
2398 + mat  - the matrix
2399 . nrow - number of rows
2400 . irow - the row local indices
2401 . ncol - number of columns
2402 . icol - the column local indices
2403 . y    - a logically two-dimensional array of values
2404 - addv - either `INSERT_VALUES` to add values to any existing entries, or `INSERT_VALUES` to replace existing entries with new values
2405 
2406   Level: intermediate
2407 
2408   Notes:
2409   If you create the matrix yourself (that is not with a call to `DMCreateMatrix()`) then you MUST call `MatSetLocalToGlobalMapping()` before using this routine
2410 
2411   Calls to `MatSetValuesLocal()` with the `INSERT_VALUES` and `ADD_VALUES`
2412   options cannot be mixed without intervening calls to the assembly
2413   routines.
2414 
2415   These values may be cached, so `MatAssemblyBegin()` and `MatAssemblyEnd()`
2416   MUST be called after all calls to `MatSetValuesLocal()` have been completed.
2417 
2418   Fortran Notes:
2419   If any of `irow`, `icol`, and `y` are scalars pass them using, for example,
2420 .vb
2421   MatSetValuesLocal(mat, one, [irow], one, [icol], [y], INSERT_VALUES)
2422 .ve
2423 
2424   If `y` is a two-dimensional array use `reshape()` to pass it as a one dimensional array
2425 
2426   Developer Note:
2427   This is labeled with C so does not automatically generate Fortran stubs and interfaces
2428   because it requires multiple Fortran interfaces depending on which arguments are scalar or arrays.
2429 
2430 .seealso: [](ch_matrices), `Mat`, `MatAssemblyBegin()`, `MatAssemblyEnd()`, `MatSetValues()`, `MatSetLocalToGlobalMapping()`,
2431           `MatGetValuesLocal()`
2432 @*/
2433 PetscErrorCode MatSetValuesLocal(Mat mat, PetscInt nrow, const PetscInt irow[], PetscInt ncol, const PetscInt icol[], const PetscScalar y[], InsertMode addv)
2434 {
2435   PetscFunctionBeginHot;
2436   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
2437   PetscValidType(mat, 1);
2438   MatCheckPreallocated(mat, 1);
2439   if (!nrow || !ncol) PetscFunctionReturn(PETSC_SUCCESS); /* no values to insert */
2440   PetscAssertPointer(irow, 3);
2441   PetscAssertPointer(icol, 5);
2442   if (mat->insertmode == NOT_SET_VALUES) mat->insertmode = addv;
2443   else PetscCheck(mat->insertmode == addv, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Cannot mix add values and insert values");
2444   if (PetscDefined(USE_DEBUG)) {
2445     PetscCheck(!mat->factortype, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
2446     PetscCheck(mat->ops->setvalueslocal || mat->ops->setvalues, PETSC_COMM_SELF, PETSC_ERR_SUP, "Mat type %s", ((PetscObject)mat)->type_name);
2447   }
2448 
2449   if (mat->assembled) {
2450     mat->was_assembled = PETSC_TRUE;
2451     mat->assembled     = PETSC_FALSE;
2452   }
2453   PetscCall(PetscLogEventBegin(MAT_SetValues, mat, 0, 0, 0));
2454   if (mat->ops->setvalueslocal) PetscUseTypeMethod(mat, setvalueslocal, nrow, irow, ncol, icol, y, addv);
2455   else {
2456     PetscInt        buf[8192], *bufr = NULL, *bufc = NULL;
2457     const PetscInt *irowm, *icolm;
2458 
2459     if ((!mat->rmap->mapping && !mat->cmap->mapping) || (nrow + ncol) <= (PetscInt)PETSC_STATIC_ARRAY_LENGTH(buf)) {
2460       bufr  = buf;
2461       bufc  = buf + nrow;
2462       irowm = bufr;
2463       icolm = bufc;
2464     } else {
2465       PetscCall(PetscMalloc2(nrow, &bufr, ncol, &bufc));
2466       irowm = bufr;
2467       icolm = bufc;
2468     }
2469     if (mat->rmap->mapping) PetscCall(ISLocalToGlobalMappingApply(mat->rmap->mapping, nrow, irow, bufr));
2470     else irowm = irow;
2471     if (mat->cmap->mapping) {
2472       if (mat->cmap->mapping != mat->rmap->mapping || ncol != nrow || icol != irow) {
2473         PetscCall(ISLocalToGlobalMappingApply(mat->cmap->mapping, ncol, icol, bufc));
2474       } else icolm = irowm;
2475     } else icolm = icol;
2476     PetscCall(MatSetValues(mat, nrow, irowm, ncol, icolm, y, addv));
2477     if (bufr != buf) PetscCall(PetscFree2(bufr, bufc));
2478   }
2479   PetscCall(PetscLogEventEnd(MAT_SetValues, mat, 0, 0, 0));
2480   PetscFunctionReturn(PETSC_SUCCESS);
2481 }
2482 
2483 /*@
2484   MatSetValuesBlockedLocal - Inserts or adds values into certain locations of a matrix,
2485   using a local ordering of the nodes a block at a time.
2486 
2487   Not Collective
2488 
2489   Input Parameters:
2490 + mat  - the matrix
2491 . nrow - number of rows
2492 . irow - the row local indices
2493 . ncol - number of columns
2494 . icol - the column local indices
2495 . y    - a logically two-dimensional array of values
2496 - addv - either `ADD_VALUES` to add values to any existing entries, or `INSERT_VALUES` to replace existing entries with new values
2497 
2498   Level: intermediate
2499 
2500   Notes:
2501   If you create the matrix yourself (that is not with a call to `DMCreateMatrix()`) then you MUST call `MatSetBlockSize()` and `MatSetLocalToGlobalMapping()`
2502   before using this routineBefore calling `MatSetValuesLocal()`, the user must first set the
2503 
2504   Calls to `MatSetValuesBlockedLocal()` with the `INSERT_VALUES` and `ADD_VALUES`
2505   options cannot be mixed without intervening calls to the assembly
2506   routines.
2507 
2508   These values may be cached, so `MatAssemblyBegin()` and `MatAssemblyEnd()`
2509   MUST be called after all calls to `MatSetValuesBlockedLocal()` have been completed.
2510 
2511   Fortran Notes:
2512   If any of `irow`, `icol`, and `y` are scalars pass them using, for example,
2513 .vb
2514   MatSetValuesBlockedLocal(mat, one, [irow], one, [icol], [y], INSERT_VALUES)
2515 .ve
2516 
2517   If `y` is a two-dimensional array use `reshape()` to pass it as a one dimensional array
2518 
2519   Developer Note:
2520   This is labeled with C so does not automatically generate Fortran stubs and interfaces
2521   because it requires multiple Fortran interfaces depending on which arguments are scalar or arrays.
2522 
2523 .seealso: [](ch_matrices), `Mat`, `MatSetBlockSize()`, `MatSetLocalToGlobalMapping()`, `MatAssemblyBegin()`, `MatAssemblyEnd()`,
2524           `MatSetValuesLocal()`, `MatSetValuesBlocked()`
2525 @*/
2526 PetscErrorCode MatSetValuesBlockedLocal(Mat mat, PetscInt nrow, const PetscInt irow[], PetscInt ncol, const PetscInt icol[], const PetscScalar y[], InsertMode addv)
2527 {
2528   PetscFunctionBeginHot;
2529   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
2530   PetscValidType(mat, 1);
2531   MatCheckPreallocated(mat, 1);
2532   if (!nrow || !ncol) PetscFunctionReturn(PETSC_SUCCESS); /* no values to insert */
2533   PetscAssertPointer(irow, 3);
2534   PetscAssertPointer(icol, 5);
2535   if (mat->insertmode == NOT_SET_VALUES) mat->insertmode = addv;
2536   else PetscCheck(mat->insertmode == addv, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Cannot mix add values and insert values");
2537   if (PetscDefined(USE_DEBUG)) {
2538     PetscCheck(!mat->factortype, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
2539     PetscCheck(mat->ops->setvaluesblockedlocal || mat->ops->setvaluesblocked || mat->ops->setvalueslocal || mat->ops->setvalues, PETSC_COMM_SELF, PETSC_ERR_SUP, "Mat type %s", ((PetscObject)mat)->type_name);
2540   }
2541 
2542   if (mat->assembled) {
2543     mat->was_assembled = PETSC_TRUE;
2544     mat->assembled     = PETSC_FALSE;
2545   }
2546   if (PetscUnlikelyDebug(mat->rmap->mapping)) { /* Condition on the mapping existing, because MatSetValuesBlockedLocal_IS does not require it to be set. */
2547     PetscInt irbs, rbs;
2548     PetscCall(MatGetBlockSizes(mat, &rbs, NULL));
2549     PetscCall(ISLocalToGlobalMappingGetBlockSize(mat->rmap->mapping, &irbs));
2550     PetscCheck(rbs == irbs, PetscObjectComm((PetscObject)mat), PETSC_ERR_SUP, "Different row block sizes! mat %" PetscInt_FMT ", row l2g map %" PetscInt_FMT, rbs, irbs);
2551   }
2552   if (PetscUnlikelyDebug(mat->cmap->mapping)) {
2553     PetscInt icbs, cbs;
2554     PetscCall(MatGetBlockSizes(mat, NULL, &cbs));
2555     PetscCall(ISLocalToGlobalMappingGetBlockSize(mat->cmap->mapping, &icbs));
2556     PetscCheck(cbs == icbs, PetscObjectComm((PetscObject)mat), PETSC_ERR_SUP, "Different col block sizes! mat %" PetscInt_FMT ", col l2g map %" PetscInt_FMT, cbs, icbs);
2557   }
2558   PetscCall(PetscLogEventBegin(MAT_SetValues, mat, 0, 0, 0));
2559   if (mat->ops->setvaluesblockedlocal) PetscUseTypeMethod(mat, setvaluesblockedlocal, nrow, irow, ncol, icol, y, addv);
2560   else {
2561     PetscInt        buf[8192], *bufr = NULL, *bufc = NULL;
2562     const PetscInt *irowm, *icolm;
2563 
2564     if ((!mat->rmap->mapping && !mat->cmap->mapping) || (nrow + ncol) <= ((PetscInt)PETSC_STATIC_ARRAY_LENGTH(buf))) {
2565       bufr  = buf;
2566       bufc  = buf + nrow;
2567       irowm = bufr;
2568       icolm = bufc;
2569     } else {
2570       PetscCall(PetscMalloc2(nrow, &bufr, ncol, &bufc));
2571       irowm = bufr;
2572       icolm = bufc;
2573     }
2574     if (mat->rmap->mapping) PetscCall(ISLocalToGlobalMappingApplyBlock(mat->rmap->mapping, nrow, irow, bufr));
2575     else irowm = irow;
2576     if (mat->cmap->mapping) {
2577       if (mat->cmap->mapping != mat->rmap->mapping || ncol != nrow || icol != irow) {
2578         PetscCall(ISLocalToGlobalMappingApplyBlock(mat->cmap->mapping, ncol, icol, bufc));
2579       } else icolm = irowm;
2580     } else icolm = icol;
2581     PetscCall(MatSetValuesBlocked(mat, nrow, irowm, ncol, icolm, y, addv));
2582     if (bufr != buf) PetscCall(PetscFree2(bufr, bufc));
2583   }
2584   PetscCall(PetscLogEventEnd(MAT_SetValues, mat, 0, 0, 0));
2585   PetscFunctionReturn(PETSC_SUCCESS);
2586 }
2587 
2588 /*@
2589   MatMultDiagonalBlock - Computes the matrix-vector product, $y = Dx$. Where `D` is defined by the inode or block structure of the diagonal
2590 
2591   Collective
2592 
2593   Input Parameters:
2594 + mat - the matrix
2595 - x   - the vector to be multiplied
2596 
2597   Output Parameter:
2598 . y - the result
2599 
2600   Level: developer
2601 
2602   Note:
2603   The vectors `x` and `y` cannot be the same.  I.e., one cannot
2604   call `MatMultDiagonalBlock`(A,y,y).
2605 
2606 .seealso: [](ch_matrices), `Mat`, `MatMult()`, `MatMultTranspose()`, `MatMultAdd()`, `MatMultTransposeAdd()`
2607 @*/
2608 PetscErrorCode MatMultDiagonalBlock(Mat mat, Vec x, Vec y)
2609 {
2610   PetscFunctionBegin;
2611   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
2612   PetscValidType(mat, 1);
2613   PetscValidHeaderSpecific(x, VEC_CLASSID, 2);
2614   PetscValidHeaderSpecific(y, VEC_CLASSID, 3);
2615 
2616   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
2617   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
2618   PetscCheck(x != y, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "x and y must be different vectors");
2619   MatCheckPreallocated(mat, 1);
2620 
2621   PetscUseTypeMethod(mat, multdiagonalblock, x, y);
2622   PetscCall(PetscObjectStateIncrease((PetscObject)y));
2623   PetscFunctionReturn(PETSC_SUCCESS);
2624 }
2625 
2626 /*@
2627   MatMult - Computes the matrix-vector product, $y = Ax$.
2628 
2629   Neighbor-wise Collective
2630 
2631   Input Parameters:
2632 + mat - the matrix
2633 - x   - the vector to be multiplied
2634 
2635   Output Parameter:
2636 . y - the result
2637 
2638   Level: beginner
2639 
2640   Note:
2641   The vectors `x` and `y` cannot be the same.  I.e., one cannot
2642   call `MatMult`(A,y,y).
2643 
2644 .seealso: [](ch_matrices), `Mat`, `MatMultTranspose()`, `MatMultAdd()`, `MatMultTransposeAdd()`
2645 @*/
2646 PetscErrorCode MatMult(Mat mat, Vec x, Vec y)
2647 {
2648   PetscFunctionBegin;
2649   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
2650   PetscValidType(mat, 1);
2651   PetscValidHeaderSpecific(x, VEC_CLASSID, 2);
2652   VecCheckAssembled(x);
2653   PetscValidHeaderSpecific(y, VEC_CLASSID, 3);
2654   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
2655   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
2656   PetscCheck(x != y, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "x and y must be different vectors");
2657   PetscCheck(mat->cmap->N == x->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec x: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->cmap->N, x->map->N);
2658   PetscCheck(mat->rmap->N == y->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec y: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->N, y->map->N);
2659   PetscCheck(mat->cmap->n == x->map->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Mat mat,Vec x: local dim %" PetscInt_FMT " %" PetscInt_FMT, mat->cmap->n, x->map->n);
2660   PetscCheck(mat->rmap->n == y->map->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Mat mat,Vec y: local dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->n, y->map->n);
2661   PetscCall(VecSetErrorIfLocked(y, 3));
2662   if (mat->erroriffailure) PetscCall(VecValidValues_Internal(x, 2, PETSC_TRUE));
2663   MatCheckPreallocated(mat, 1);
2664 
2665   PetscCall(VecLockReadPush(x));
2666   PetscCall(PetscLogEventBegin(MAT_Mult, mat, x, y, 0));
2667   PetscUseTypeMethod(mat, mult, x, y);
2668   PetscCall(PetscLogEventEnd(MAT_Mult, mat, x, y, 0));
2669   if (mat->erroriffailure) PetscCall(VecValidValues_Internal(y, 3, PETSC_FALSE));
2670   PetscCall(VecLockReadPop(x));
2671   PetscFunctionReturn(PETSC_SUCCESS);
2672 }
2673 
2674 /*@
2675   MatMultTranspose - Computes matrix transpose times a vector $y = A^T * x$.
2676 
2677   Neighbor-wise Collective
2678 
2679   Input Parameters:
2680 + mat - the matrix
2681 - x   - the vector to be multiplied
2682 
2683   Output Parameter:
2684 . y - the result
2685 
2686   Level: beginner
2687 
2688   Notes:
2689   The vectors `x` and `y` cannot be the same.  I.e., one cannot
2690   call `MatMultTranspose`(A,y,y).
2691 
2692   For complex numbers this does NOT compute the Hermitian (complex conjugate) transpose multiple,
2693   use `MatMultHermitianTranspose()`
2694 
2695 .seealso: [](ch_matrices), `Mat`, `MatMult()`, `MatMultAdd()`, `MatMultTransposeAdd()`, `MatMultHermitianTranspose()`, `MatTranspose()`
2696 @*/
2697 PetscErrorCode MatMultTranspose(Mat mat, Vec x, Vec y)
2698 {
2699   PetscErrorCode (*op)(Mat, Vec, Vec) = NULL;
2700 
2701   PetscFunctionBegin;
2702   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
2703   PetscValidType(mat, 1);
2704   PetscValidHeaderSpecific(x, VEC_CLASSID, 2);
2705   VecCheckAssembled(x);
2706   PetscValidHeaderSpecific(y, VEC_CLASSID, 3);
2707 
2708   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
2709   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
2710   PetscCheck(x != y, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "x and y must be different vectors");
2711   PetscCheck(mat->cmap->N == y->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec y: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->cmap->N, y->map->N);
2712   PetscCheck(mat->rmap->N == x->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec x: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->N, x->map->N);
2713   PetscCheck(mat->cmap->n == y->map->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Mat mat,Vec y: local dim %" PetscInt_FMT " %" PetscInt_FMT, mat->cmap->n, y->map->n);
2714   PetscCheck(mat->rmap->n == x->map->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Mat mat,Vec x: local dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->n, x->map->n);
2715   if (mat->erroriffailure) PetscCall(VecValidValues_Internal(x, 2, PETSC_TRUE));
2716   MatCheckPreallocated(mat, 1);
2717 
2718   if (!mat->ops->multtranspose) {
2719     if (mat->symmetric == PETSC_BOOL3_TRUE && mat->ops->mult) op = mat->ops->mult;
2720     PetscCheck(op, PetscObjectComm((PetscObject)mat), PETSC_ERR_SUP, "Matrix type %s does not have a multiply transpose defined or is symmetric and does not have a multiply defined", ((PetscObject)mat)->type_name);
2721   } else op = mat->ops->multtranspose;
2722   PetscCall(PetscLogEventBegin(MAT_MultTranspose, mat, x, y, 0));
2723   PetscCall(VecLockReadPush(x));
2724   PetscCall((*op)(mat, x, y));
2725   PetscCall(VecLockReadPop(x));
2726   PetscCall(PetscLogEventEnd(MAT_MultTranspose, mat, x, y, 0));
2727   PetscCall(PetscObjectStateIncrease((PetscObject)y));
2728   if (mat->erroriffailure) PetscCall(VecValidValues_Internal(y, 3, PETSC_FALSE));
2729   PetscFunctionReturn(PETSC_SUCCESS);
2730 }
2731 
2732 /*@
2733   MatMultHermitianTranspose - Computes matrix Hermitian-transpose times a vector $y = A^H * x$.
2734 
2735   Neighbor-wise Collective
2736 
2737   Input Parameters:
2738 + mat - the matrix
2739 - x   - the vector to be multiplied
2740 
2741   Output Parameter:
2742 . y - the result
2743 
2744   Level: beginner
2745 
2746   Notes:
2747   The vectors `x` and `y` cannot be the same.  I.e., one cannot
2748   call `MatMultHermitianTranspose`(A,y,y).
2749 
2750   Also called the conjugate transpose, complex conjugate transpose, or adjoint.
2751 
2752   For real numbers `MatMultTranspose()` and `MatMultHermitianTranspose()` are identical.
2753 
2754 .seealso: [](ch_matrices), `Mat`, `MatMult()`, `MatMultAdd()`, `MatMultHermitianTransposeAdd()`, `MatMultTranspose()`
2755 @*/
2756 PetscErrorCode MatMultHermitianTranspose(Mat mat, Vec x, Vec y)
2757 {
2758   PetscFunctionBegin;
2759   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
2760   PetscValidType(mat, 1);
2761   PetscValidHeaderSpecific(x, VEC_CLASSID, 2);
2762   PetscValidHeaderSpecific(y, VEC_CLASSID, 3);
2763 
2764   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
2765   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
2766   PetscCheck(x != y, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "x and y must be different vectors");
2767   PetscCheck(mat->cmap->N == y->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec y: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->cmap->N, y->map->N);
2768   PetscCheck(mat->rmap->N == x->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec x: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->N, x->map->N);
2769   PetscCheck(mat->cmap->n == y->map->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Mat mat,Vec y: local dim %" PetscInt_FMT " %" PetscInt_FMT, mat->cmap->n, y->map->n);
2770   PetscCheck(mat->rmap->n == x->map->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Mat mat,Vec x: local dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->n, x->map->n);
2771   MatCheckPreallocated(mat, 1);
2772 
2773   PetscCall(PetscLogEventBegin(MAT_MultHermitianTranspose, mat, x, y, 0));
2774 #if defined(PETSC_USE_COMPLEX)
2775   if (mat->ops->multhermitiantranspose || (mat->hermitian == PETSC_BOOL3_TRUE && mat->ops->mult)) {
2776     PetscCall(VecLockReadPush(x));
2777     if (mat->ops->multhermitiantranspose) PetscUseTypeMethod(mat, multhermitiantranspose, x, y);
2778     else PetscUseTypeMethod(mat, mult, x, y);
2779     PetscCall(VecLockReadPop(x));
2780   } else {
2781     Vec w;
2782     PetscCall(VecDuplicate(x, &w));
2783     PetscCall(VecCopy(x, w));
2784     PetscCall(VecConjugate(w));
2785     PetscCall(MatMultTranspose(mat, w, y));
2786     PetscCall(VecDestroy(&w));
2787     PetscCall(VecConjugate(y));
2788   }
2789   PetscCall(PetscObjectStateIncrease((PetscObject)y));
2790 #else
2791   PetscCall(MatMultTranspose(mat, x, y));
2792 #endif
2793   PetscCall(PetscLogEventEnd(MAT_MultHermitianTranspose, mat, x, y, 0));
2794   PetscFunctionReturn(PETSC_SUCCESS);
2795 }
2796 
2797 /*@
2798   MatMultAdd -  Computes $v3 = v2 + A * v1$.
2799 
2800   Neighbor-wise Collective
2801 
2802   Input Parameters:
2803 + mat - the matrix
2804 . v1  - the vector to be multiplied by `mat`
2805 - v2  - the vector to be added to the result
2806 
2807   Output Parameter:
2808 . v3 - the result
2809 
2810   Level: beginner
2811 
2812   Note:
2813   The vectors `v1` and `v3` cannot be the same.  I.e., one cannot
2814   call `MatMultAdd`(A,v1,v2,v1).
2815 
2816 .seealso: [](ch_matrices), `Mat`, `MatMultTranspose()`, `MatMult()`, `MatMultTransposeAdd()`
2817 @*/
2818 PetscErrorCode MatMultAdd(Mat mat, Vec v1, Vec v2, Vec v3)
2819 {
2820   PetscFunctionBegin;
2821   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
2822   PetscValidType(mat, 1);
2823   PetscValidHeaderSpecific(v1, VEC_CLASSID, 2);
2824   PetscValidHeaderSpecific(v2, VEC_CLASSID, 3);
2825   PetscValidHeaderSpecific(v3, VEC_CLASSID, 4);
2826 
2827   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
2828   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
2829   PetscCheck(mat->cmap->N == v1->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec v1: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->cmap->N, v1->map->N);
2830   /* PetscCheck(mat->rmap->N == v2->map->N,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Mat mat,Vec v2: global dim %" PetscInt_FMT " %" PetscInt_FMT,mat->rmap->N,v2->map->N);
2831      PetscCheck(mat->rmap->N == v3->map->N,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Mat mat,Vec v3: global dim %" PetscInt_FMT " %" PetscInt_FMT,mat->rmap->N,v3->map->N); */
2832   PetscCheck(mat->rmap->n == v3->map->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Mat mat,Vec v3: local dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->n, v3->map->n);
2833   PetscCheck(mat->rmap->n == v2->map->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Mat mat,Vec v2: local dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->n, v2->map->n);
2834   PetscCheck(v1 != v3, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_IDN, "v1 and v3 must be different vectors");
2835   MatCheckPreallocated(mat, 1);
2836 
2837   PetscCall(PetscLogEventBegin(MAT_MultAdd, mat, v1, v2, v3));
2838   PetscCall(VecLockReadPush(v1));
2839   PetscUseTypeMethod(mat, multadd, v1, v2, v3);
2840   PetscCall(VecLockReadPop(v1));
2841   PetscCall(PetscLogEventEnd(MAT_MultAdd, mat, v1, v2, v3));
2842   PetscCall(PetscObjectStateIncrease((PetscObject)v3));
2843   PetscFunctionReturn(PETSC_SUCCESS);
2844 }
2845 
2846 /*@
2847   MatMultTransposeAdd - Computes $v3 = v2 + A^T * v1$.
2848 
2849   Neighbor-wise Collective
2850 
2851   Input Parameters:
2852 + mat - the matrix
2853 . v1  - the vector to be multiplied by the transpose of the matrix
2854 - v2  - the vector to be added to the result
2855 
2856   Output Parameter:
2857 . v3 - the result
2858 
2859   Level: beginner
2860 
2861   Note:
2862   The vectors `v1` and `v3` cannot be the same.  I.e., one cannot
2863   call `MatMultTransposeAdd`(A,v1,v2,v1).
2864 
2865 .seealso: [](ch_matrices), `Mat`, `MatMultTranspose()`, `MatMultAdd()`, `MatMult()`
2866 @*/
2867 PetscErrorCode MatMultTransposeAdd(Mat mat, Vec v1, Vec v2, Vec v3)
2868 {
2869   PetscErrorCode (*op)(Mat, Vec, Vec, Vec) = (!mat->ops->multtransposeadd && mat->symmetric) ? mat->ops->multadd : mat->ops->multtransposeadd;
2870 
2871   PetscFunctionBegin;
2872   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
2873   PetscValidType(mat, 1);
2874   PetscValidHeaderSpecific(v1, VEC_CLASSID, 2);
2875   PetscValidHeaderSpecific(v2, VEC_CLASSID, 3);
2876   PetscValidHeaderSpecific(v3, VEC_CLASSID, 4);
2877 
2878   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
2879   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
2880   PetscCheck(mat->rmap->N == v1->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec v1: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->N, v1->map->N);
2881   PetscCheck(mat->cmap->N == v2->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec v2: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->cmap->N, v2->map->N);
2882   PetscCheck(mat->cmap->N == v3->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec v3: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->cmap->N, v3->map->N);
2883   PetscCheck(v1 != v3, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_IDN, "v1 and v3 must be different vectors");
2884   PetscCheck(op, PetscObjectComm((PetscObject)mat), PETSC_ERR_SUP, "Mat type %s", ((PetscObject)mat)->type_name);
2885   MatCheckPreallocated(mat, 1);
2886 
2887   PetscCall(PetscLogEventBegin(MAT_MultTransposeAdd, mat, v1, v2, v3));
2888   PetscCall(VecLockReadPush(v1));
2889   PetscCall((*op)(mat, v1, v2, v3));
2890   PetscCall(VecLockReadPop(v1));
2891   PetscCall(PetscLogEventEnd(MAT_MultTransposeAdd, mat, v1, v2, v3));
2892   PetscCall(PetscObjectStateIncrease((PetscObject)v3));
2893   PetscFunctionReturn(PETSC_SUCCESS);
2894 }
2895 
2896 /*@
2897   MatMultHermitianTransposeAdd - Computes $v3 = v2 + A^H * v1$.
2898 
2899   Neighbor-wise Collective
2900 
2901   Input Parameters:
2902 + mat - the matrix
2903 . v1  - the vector to be multiplied by the Hermitian transpose
2904 - v2  - the vector to be added to the result
2905 
2906   Output Parameter:
2907 . v3 - the result
2908 
2909   Level: beginner
2910 
2911   Note:
2912   The vectors `v1` and `v3` cannot be the same.  I.e., one cannot
2913   call `MatMultHermitianTransposeAdd`(A,v1,v2,v1).
2914 
2915 .seealso: [](ch_matrices), `Mat`, `MatMultHermitianTranspose()`, `MatMultTranspose()`, `MatMultAdd()`, `MatMult()`
2916 @*/
2917 PetscErrorCode MatMultHermitianTransposeAdd(Mat mat, Vec v1, Vec v2, Vec v3)
2918 {
2919   PetscFunctionBegin;
2920   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
2921   PetscValidType(mat, 1);
2922   PetscValidHeaderSpecific(v1, VEC_CLASSID, 2);
2923   PetscValidHeaderSpecific(v2, VEC_CLASSID, 3);
2924   PetscValidHeaderSpecific(v3, VEC_CLASSID, 4);
2925 
2926   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
2927   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
2928   PetscCheck(v1 != v3, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_IDN, "v1 and v3 must be different vectors");
2929   PetscCheck(mat->rmap->N == v1->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec v1: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->N, v1->map->N);
2930   PetscCheck(mat->cmap->N == v2->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec v2: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->cmap->N, v2->map->N);
2931   PetscCheck(mat->cmap->N == v3->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec v3: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->cmap->N, v3->map->N);
2932   MatCheckPreallocated(mat, 1);
2933 
2934   PetscCall(PetscLogEventBegin(MAT_MultHermitianTransposeAdd, mat, v1, v2, v3));
2935   PetscCall(VecLockReadPush(v1));
2936   if (mat->ops->multhermitiantransposeadd) PetscUseTypeMethod(mat, multhermitiantransposeadd, v1, v2, v3);
2937   else {
2938     Vec w, z;
2939     PetscCall(VecDuplicate(v1, &w));
2940     PetscCall(VecCopy(v1, w));
2941     PetscCall(VecConjugate(w));
2942     PetscCall(VecDuplicate(v3, &z));
2943     PetscCall(MatMultTranspose(mat, w, z));
2944     PetscCall(VecDestroy(&w));
2945     PetscCall(VecConjugate(z));
2946     if (v2 != v3) {
2947       PetscCall(VecWAXPY(v3, 1.0, v2, z));
2948     } else {
2949       PetscCall(VecAXPY(v3, 1.0, z));
2950     }
2951     PetscCall(VecDestroy(&z));
2952   }
2953   PetscCall(VecLockReadPop(v1));
2954   PetscCall(PetscLogEventEnd(MAT_MultHermitianTransposeAdd, mat, v1, v2, v3));
2955   PetscCall(PetscObjectStateIncrease((PetscObject)v3));
2956   PetscFunctionReturn(PETSC_SUCCESS);
2957 }
2958 
2959 /*@
2960   MatGetFactorType - gets the type of factorization a matrix is
2961 
2962   Not Collective
2963 
2964   Input Parameter:
2965 . mat - the matrix
2966 
2967   Output Parameter:
2968 . t - the type, one of `MAT_FACTOR_NONE`, `MAT_FACTOR_LU`, `MAT_FACTOR_CHOLESKY`, `MAT_FACTOR_ILU`, `MAT_FACTOR_ICC,MAT_FACTOR_ILUDT`, `MAT_FACTOR_QR`
2969 
2970   Level: intermediate
2971 
2972 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatFactorType`, `MatGetFactor()`, `MatSetFactorType()`, `MAT_FACTOR_NONE`, `MAT_FACTOR_LU`, `MAT_FACTOR_CHOLESKY`, `MAT_FACTOR_ILU`,
2973           `MAT_FACTOR_ICC`,`MAT_FACTOR_ILUDT`, `MAT_FACTOR_QR`
2974 @*/
2975 PetscErrorCode MatGetFactorType(Mat mat, MatFactorType *t)
2976 {
2977   PetscFunctionBegin;
2978   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
2979   PetscValidType(mat, 1);
2980   PetscAssertPointer(t, 2);
2981   *t = mat->factortype;
2982   PetscFunctionReturn(PETSC_SUCCESS);
2983 }
2984 
2985 /*@
2986   MatSetFactorType - sets the type of factorization a matrix is
2987 
2988   Logically Collective
2989 
2990   Input Parameters:
2991 + mat - the matrix
2992 - t   - the type, one of `MAT_FACTOR_NONE`, `MAT_FACTOR_LU`, `MAT_FACTOR_CHOLESKY`, `MAT_FACTOR_ILU`, `MAT_FACTOR_ICC,MAT_FACTOR_ILUDT`, `MAT_FACTOR_QR`
2993 
2994   Level: intermediate
2995 
2996 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatFactorType`, `MatGetFactor()`, `MatGetFactorType()`, `MAT_FACTOR_NONE`, `MAT_FACTOR_LU`, `MAT_FACTOR_CHOLESKY`, `MAT_FACTOR_ILU`,
2997           `MAT_FACTOR_ICC`,`MAT_FACTOR_ILUDT`, `MAT_FACTOR_QR`
2998 @*/
2999 PetscErrorCode MatSetFactorType(Mat mat, MatFactorType t)
3000 {
3001   PetscFunctionBegin;
3002   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
3003   PetscValidType(mat, 1);
3004   mat->factortype = t;
3005   PetscFunctionReturn(PETSC_SUCCESS);
3006 }
3007 
3008 /*@
3009   MatGetInfo - Returns information about matrix storage (number of
3010   nonzeros, memory, etc.).
3011 
3012   Collective if `MAT_GLOBAL_MAX` or `MAT_GLOBAL_SUM` is used as the flag
3013 
3014   Input Parameters:
3015 + mat  - the matrix
3016 - flag - flag indicating the type of parameters to be returned (`MAT_LOCAL` - local matrix, `MAT_GLOBAL_MAX` - maximum over all processors, `MAT_GLOBAL_SUM` - sum over all processors)
3017 
3018   Output Parameter:
3019 . info - matrix information context
3020 
3021   Options Database Key:
3022 . -mat_view ::ascii_info - print matrix info to `PETSC_STDOUT`
3023 
3024   Level: intermediate
3025 
3026   Notes:
3027   The `MatInfo` context contains a variety of matrix data, including
3028   number of nonzeros allocated and used, number of mallocs during
3029   matrix assembly, etc.  Additional information for factored matrices
3030   is provided (such as the fill ratio, number of mallocs during
3031   factorization, etc.).
3032 
3033   Example:
3034   See the file ${PETSC_DIR}/include/petscmat.h for a complete list of
3035   data within the `MatInfo` context.  For example,
3036 .vb
3037       MatInfo info;
3038       Mat     A;
3039       double  mal, nz_a, nz_u;
3040 
3041       MatGetInfo(A, MAT_LOCAL, &info);
3042       mal  = info.mallocs;
3043       nz_a = info.nz_allocated;
3044 .ve
3045 
3046   Fortran Note:
3047   Declare info as a `MatInfo` array of dimension `MAT_INFO_SIZE`, and then extract the parameters
3048   of interest.  See the file ${PETSC_DIR}/include/petsc/finclude/petscmat.h
3049   a complete list of parameter names.
3050 .vb
3051       MatInfo info(MAT_INFO_SIZE)
3052       double  precision mal, nz_a
3053       Mat     A
3054       integer ierr
3055 
3056       call MatGetInfo(A, MAT_LOCAL, info, ierr)
3057       mal = info(MAT_INFO_MALLOCS)
3058       nz_a = info(MAT_INFO_NZ_ALLOCATED)
3059 .ve
3060 
3061 .seealso: [](ch_matrices), `Mat`, `MatInfo`, `MatStashGetInfo()`
3062 @*/
3063 PetscErrorCode MatGetInfo(Mat mat, MatInfoType flag, MatInfo *info)
3064 {
3065   PetscFunctionBegin;
3066   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
3067   PetscValidType(mat, 1);
3068   PetscAssertPointer(info, 3);
3069   MatCheckPreallocated(mat, 1);
3070   PetscUseTypeMethod(mat, getinfo, flag, info);
3071   PetscFunctionReturn(PETSC_SUCCESS);
3072 }
3073 
3074 /*
3075    This is used by external packages where it is not easy to get the info from the actual
3076    matrix factorization.
3077 */
3078 PetscErrorCode MatGetInfo_External(Mat A, MatInfoType flag, MatInfo *info)
3079 {
3080   PetscFunctionBegin;
3081   PetscCall(PetscMemzero(info, sizeof(MatInfo)));
3082   PetscFunctionReturn(PETSC_SUCCESS);
3083 }
3084 
3085 /*@
3086   MatLUFactor - Performs in-place LU factorization of matrix.
3087 
3088   Collective
3089 
3090   Input Parameters:
3091 + mat  - the matrix
3092 . row  - row permutation
3093 . col  - column permutation
3094 - info - options for factorization, includes
3095 .vb
3096           fill - expected fill as ratio of original fill.
3097           dtcol - pivot tolerance (0 no pivot, 1 full column pivoting)
3098                    Run with the option -info to determine an optimal value to use
3099 .ve
3100 
3101   Level: developer
3102 
3103   Notes:
3104   Most users should employ the `KSP` interface for linear solvers
3105   instead of working directly with matrix algebra routines such as this.
3106   See, e.g., `KSPCreate()`.
3107 
3108   This changes the state of the matrix to a factored matrix; it cannot be used
3109   for example with `MatSetValues()` unless one first calls `MatSetUnfactored()`.
3110 
3111   This is really in-place only for dense matrices, the preferred approach is to use `MatGetFactor()`, `MatLUFactorSymbolic()`, and `MatLUFactorNumeric()`
3112   when not using `KSP`.
3113 
3114   Developer Note:
3115   The Fortran interface is not autogenerated as the
3116   interface definition cannot be generated correctly [due to `MatFactorInfo`]
3117 
3118 .seealso: [](ch_matrices), [Matrix Factorization](sec_matfactor), `Mat`, `MatFactorType`, `MatLUFactorSymbolic()`, `MatLUFactorNumeric()`, `MatCholeskyFactor()`,
3119           `MatGetOrdering()`, `MatSetUnfactored()`, `MatFactorInfo`, `MatGetFactor()`
3120 @*/
3121 PetscErrorCode MatLUFactor(Mat mat, IS row, IS col, const MatFactorInfo *info)
3122 {
3123   MatFactorInfo tinfo;
3124 
3125   PetscFunctionBegin;
3126   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
3127   if (row) PetscValidHeaderSpecific(row, IS_CLASSID, 2);
3128   if (col) PetscValidHeaderSpecific(col, IS_CLASSID, 3);
3129   if (info) PetscAssertPointer(info, 4);
3130   PetscValidType(mat, 1);
3131   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
3132   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
3133   MatCheckPreallocated(mat, 1);
3134   if (!info) {
3135     PetscCall(MatFactorInfoInitialize(&tinfo));
3136     info = &tinfo;
3137   }
3138 
3139   PetscCall(PetscLogEventBegin(MAT_LUFactor, mat, row, col, 0));
3140   PetscUseTypeMethod(mat, lufactor, row, col, info);
3141   PetscCall(PetscLogEventEnd(MAT_LUFactor, mat, row, col, 0));
3142   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
3143   PetscFunctionReturn(PETSC_SUCCESS);
3144 }
3145 
3146 /*@
3147   MatILUFactor - Performs in-place ILU factorization of matrix.
3148 
3149   Collective
3150 
3151   Input Parameters:
3152 + mat  - the matrix
3153 . row  - row permutation
3154 . col  - column permutation
3155 - info - structure containing
3156 .vb
3157       levels - number of levels of fill.
3158       expected fill - as ratio of original fill.
3159       1 or 0 - indicating force fill on diagonal (improves robustness for matrices
3160                 missing diagonal entries)
3161 .ve
3162 
3163   Level: developer
3164 
3165   Notes:
3166   Most users should employ the `KSP` interface for linear solvers
3167   instead of working directly with matrix algebra routines such as this.
3168   See, e.g., `KSPCreate()`.
3169 
3170   Probably really in-place only when level of fill is zero, otherwise allocates
3171   new space to store factored matrix and deletes previous memory. The preferred approach is to use `MatGetFactor()`, `MatILUFactorSymbolic()`, and `MatILUFactorNumeric()`
3172   when not using `KSP`.
3173 
3174   Developer Note:
3175   The Fortran interface is not autogenerated as the
3176   interface definition cannot be generated correctly [due to MatFactorInfo]
3177 
3178 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatILUFactorSymbolic()`, `MatLUFactorNumeric()`, `MatCholeskyFactor()`, `MatFactorInfo`
3179 @*/
3180 PetscErrorCode MatILUFactor(Mat mat, IS row, IS col, const MatFactorInfo *info)
3181 {
3182   PetscFunctionBegin;
3183   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
3184   if (row) PetscValidHeaderSpecific(row, IS_CLASSID, 2);
3185   if (col) PetscValidHeaderSpecific(col, IS_CLASSID, 3);
3186   PetscAssertPointer(info, 4);
3187   PetscValidType(mat, 1);
3188   PetscCheck(mat->rmap->N == mat->cmap->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONG, "matrix must be square");
3189   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
3190   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
3191   MatCheckPreallocated(mat, 1);
3192 
3193   PetscCall(PetscLogEventBegin(MAT_ILUFactor, mat, row, col, 0));
3194   PetscUseTypeMethod(mat, ilufactor, row, col, info);
3195   PetscCall(PetscLogEventEnd(MAT_ILUFactor, mat, row, col, 0));
3196   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
3197   PetscFunctionReturn(PETSC_SUCCESS);
3198 }
3199 
3200 /*@
3201   MatLUFactorSymbolic - Performs symbolic LU factorization of matrix.
3202   Call this routine before calling `MatLUFactorNumeric()` and after `MatGetFactor()`.
3203 
3204   Collective
3205 
3206   Input Parameters:
3207 + fact - the factor matrix obtained with `MatGetFactor()`
3208 . mat  - the matrix
3209 . row  - the row permutation
3210 . col  - the column permutation
3211 - info - options for factorization, includes
3212 .vb
3213           fill - expected fill as ratio of original fill. Run with the option -info to determine an optimal value to use
3214           dtcol - pivot tolerance (0 no pivot, 1 full column pivoting)
3215 .ve
3216 
3217   Level: developer
3218 
3219   Notes:
3220   See [Matrix Factorization](sec_matfactor) for additional information about factorizations
3221 
3222   Most users should employ the simplified `KSP` interface for linear solvers
3223   instead of working directly with matrix algebra routines such as this.
3224   See, e.g., `KSPCreate()`.
3225 
3226   Developer Note:
3227   The Fortran interface is not autogenerated as the
3228   interface definition cannot be generated correctly [due to `MatFactorInfo`]
3229 
3230 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatGetFactor()`, `MatLUFactor()`, `MatLUFactorNumeric()`, `MatCholeskyFactor()`, `MatFactorInfo`, `MatFactorInfoInitialize()`
3231 @*/
3232 PetscErrorCode MatLUFactorSymbolic(Mat fact, Mat mat, IS row, IS col, const MatFactorInfo *info)
3233 {
3234   MatFactorInfo tinfo;
3235 
3236   PetscFunctionBegin;
3237   PetscValidHeaderSpecific(fact, MAT_CLASSID, 1);
3238   PetscValidHeaderSpecific(mat, MAT_CLASSID, 2);
3239   if (row) PetscValidHeaderSpecific(row, IS_CLASSID, 3);
3240   if (col) PetscValidHeaderSpecific(col, IS_CLASSID, 4);
3241   if (info) PetscAssertPointer(info, 5);
3242   PetscValidType(fact, 1);
3243   PetscValidType(mat, 2);
3244   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
3245   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
3246   MatCheckPreallocated(mat, 2);
3247   if (!info) {
3248     PetscCall(MatFactorInfoInitialize(&tinfo));
3249     info = &tinfo;
3250   }
3251 
3252   if (!fact->trivialsymbolic) PetscCall(PetscLogEventBegin(MAT_LUFactorSymbolic, mat, row, col, 0));
3253   PetscUseTypeMethod(fact, lufactorsymbolic, mat, row, col, info);
3254   if (!fact->trivialsymbolic) PetscCall(PetscLogEventEnd(MAT_LUFactorSymbolic, mat, row, col, 0));
3255   PetscCall(PetscObjectStateIncrease((PetscObject)fact));
3256   PetscFunctionReturn(PETSC_SUCCESS);
3257 }
3258 
3259 /*@
3260   MatLUFactorNumeric - Performs numeric LU factorization of a matrix.
3261   Call this routine after first calling `MatLUFactorSymbolic()` and `MatGetFactor()`.
3262 
3263   Collective
3264 
3265   Input Parameters:
3266 + fact - the factor matrix obtained with `MatGetFactor()`
3267 . mat  - the matrix
3268 - info - options for factorization
3269 
3270   Level: developer
3271 
3272   Notes:
3273   See `MatLUFactor()` for in-place factorization.  See
3274   `MatCholeskyFactorNumeric()` for the symmetric, positive definite case.
3275 
3276   Most users should employ the `KSP` interface for linear solvers
3277   instead of working directly with matrix algebra routines such as this.
3278   See, e.g., `KSPCreate()`.
3279 
3280   Developer Note:
3281   The Fortran interface is not autogenerated as the
3282   interface definition cannot be generated correctly [due to `MatFactorInfo`]
3283 
3284 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatGetFactor()`, `MatFactorInfo`, `MatLUFactorSymbolic()`, `MatLUFactor()`, `MatCholeskyFactor()`
3285 @*/
3286 PetscErrorCode MatLUFactorNumeric(Mat fact, Mat mat, const MatFactorInfo *info)
3287 {
3288   MatFactorInfo tinfo;
3289 
3290   PetscFunctionBegin;
3291   PetscValidHeaderSpecific(fact, MAT_CLASSID, 1);
3292   PetscValidHeaderSpecific(mat, MAT_CLASSID, 2);
3293   PetscValidType(fact, 1);
3294   PetscValidType(mat, 2);
3295   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
3296   PetscCheck(mat->rmap->N == (fact)->rmap->N && mat->cmap->N == (fact)->cmap->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Mat fact: global dimensions are different %" PetscInt_FMT " should = %" PetscInt_FMT " %" PetscInt_FMT " should = %" PetscInt_FMT,
3297              mat->rmap->N, (fact)->rmap->N, mat->cmap->N, (fact)->cmap->N);
3298 
3299   MatCheckPreallocated(mat, 2);
3300   if (!info) {
3301     PetscCall(MatFactorInfoInitialize(&tinfo));
3302     info = &tinfo;
3303   }
3304 
3305   if (!fact->trivialsymbolic) PetscCall(PetscLogEventBegin(MAT_LUFactorNumeric, mat, fact, 0, 0));
3306   else PetscCall(PetscLogEventBegin(MAT_LUFactor, mat, fact, 0, 0));
3307   PetscUseTypeMethod(fact, lufactornumeric, mat, info);
3308   if (!fact->trivialsymbolic) PetscCall(PetscLogEventEnd(MAT_LUFactorNumeric, mat, fact, 0, 0));
3309   else PetscCall(PetscLogEventEnd(MAT_LUFactor, mat, fact, 0, 0));
3310   PetscCall(MatViewFromOptions(fact, NULL, "-mat_factor_view"));
3311   PetscCall(PetscObjectStateIncrease((PetscObject)fact));
3312   PetscFunctionReturn(PETSC_SUCCESS);
3313 }
3314 
3315 /*@
3316   MatCholeskyFactor - Performs in-place Cholesky factorization of a
3317   symmetric matrix.
3318 
3319   Collective
3320 
3321   Input Parameters:
3322 + mat  - the matrix
3323 . perm - row and column permutations
3324 - info - expected fill as ratio of original fill
3325 
3326   Level: developer
3327 
3328   Notes:
3329   See `MatLUFactor()` for the nonsymmetric case.  See also `MatGetFactor()`,
3330   `MatCholeskyFactorSymbolic()`, and `MatCholeskyFactorNumeric()`.
3331 
3332   Most users should employ the `KSP` interface for linear solvers
3333   instead of working directly with matrix algebra routines such as this.
3334   See, e.g., `KSPCreate()`.
3335 
3336   Developer Note:
3337   The Fortran interface is not autogenerated as the
3338   interface definition cannot be generated correctly [due to `MatFactorInfo`]
3339 
3340 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatGetFactor()`, `MatFactorInfo`, `MatLUFactor()`, `MatCholeskyFactorSymbolic()`, `MatCholeskyFactorNumeric()`
3341           `MatGetOrdering()`
3342 @*/
3343 PetscErrorCode MatCholeskyFactor(Mat mat, IS perm, const MatFactorInfo *info)
3344 {
3345   MatFactorInfo tinfo;
3346 
3347   PetscFunctionBegin;
3348   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
3349   if (perm) PetscValidHeaderSpecific(perm, IS_CLASSID, 2);
3350   if (info) PetscAssertPointer(info, 3);
3351   PetscValidType(mat, 1);
3352   PetscCheck(mat->rmap->N == mat->cmap->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONG, "Matrix must be square");
3353   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
3354   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
3355   MatCheckPreallocated(mat, 1);
3356   if (!info) {
3357     PetscCall(MatFactorInfoInitialize(&tinfo));
3358     info = &tinfo;
3359   }
3360 
3361   PetscCall(PetscLogEventBegin(MAT_CholeskyFactor, mat, perm, 0, 0));
3362   PetscUseTypeMethod(mat, choleskyfactor, perm, info);
3363   PetscCall(PetscLogEventEnd(MAT_CholeskyFactor, mat, perm, 0, 0));
3364   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
3365   PetscFunctionReturn(PETSC_SUCCESS);
3366 }
3367 
3368 /*@
3369   MatCholeskyFactorSymbolic - Performs symbolic Cholesky factorization
3370   of a symmetric matrix.
3371 
3372   Collective
3373 
3374   Input Parameters:
3375 + fact - the factor matrix obtained with `MatGetFactor()`
3376 . mat  - the matrix
3377 . perm - row and column permutations
3378 - info - options for factorization, includes
3379 .vb
3380           fill - expected fill as ratio of original fill.
3381           dtcol - pivot tolerance (0 no pivot, 1 full column pivoting)
3382                    Run with the option -info to determine an optimal value to use
3383 .ve
3384 
3385   Level: developer
3386 
3387   Notes:
3388   See `MatLUFactorSymbolic()` for the nonsymmetric case.  See also
3389   `MatCholeskyFactor()` and `MatCholeskyFactorNumeric()`.
3390 
3391   Most users should employ the `KSP` interface for linear solvers
3392   instead of working directly with matrix algebra routines such as this.
3393   See, e.g., `KSPCreate()`.
3394 
3395   Developer Note:
3396   The Fortran interface is not autogenerated as the
3397   interface definition cannot be generated correctly [due to `MatFactorInfo`]
3398 
3399 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatFactorInfo`, `MatGetFactor()`, `MatLUFactorSymbolic()`, `MatCholeskyFactor()`, `MatCholeskyFactorNumeric()`
3400           `MatGetOrdering()`
3401 @*/
3402 PetscErrorCode MatCholeskyFactorSymbolic(Mat fact, Mat mat, IS perm, const MatFactorInfo *info)
3403 {
3404   MatFactorInfo tinfo;
3405 
3406   PetscFunctionBegin;
3407   PetscValidHeaderSpecific(fact, MAT_CLASSID, 1);
3408   PetscValidHeaderSpecific(mat, MAT_CLASSID, 2);
3409   if (perm) PetscValidHeaderSpecific(perm, IS_CLASSID, 3);
3410   if (info) PetscAssertPointer(info, 4);
3411   PetscValidType(fact, 1);
3412   PetscValidType(mat, 2);
3413   PetscCheck(mat->rmap->N == mat->cmap->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONG, "Matrix must be square");
3414   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
3415   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
3416   MatCheckPreallocated(mat, 2);
3417   if (!info) {
3418     PetscCall(MatFactorInfoInitialize(&tinfo));
3419     info = &tinfo;
3420   }
3421 
3422   if (!fact->trivialsymbolic) PetscCall(PetscLogEventBegin(MAT_CholeskyFactorSymbolic, mat, perm, 0, 0));
3423   PetscUseTypeMethod(fact, choleskyfactorsymbolic, mat, perm, info);
3424   if (!fact->trivialsymbolic) PetscCall(PetscLogEventEnd(MAT_CholeskyFactorSymbolic, mat, perm, 0, 0));
3425   PetscCall(PetscObjectStateIncrease((PetscObject)fact));
3426   PetscFunctionReturn(PETSC_SUCCESS);
3427 }
3428 
3429 /*@
3430   MatCholeskyFactorNumeric - Performs numeric Cholesky factorization
3431   of a symmetric matrix. Call this routine after first calling `MatGetFactor()` and
3432   `MatCholeskyFactorSymbolic()`.
3433 
3434   Collective
3435 
3436   Input Parameters:
3437 + fact - the factor matrix obtained with `MatGetFactor()`, where the factored values are stored
3438 . mat  - the initial matrix that is to be factored
3439 - info - options for factorization
3440 
3441   Level: developer
3442 
3443   Note:
3444   Most users should employ the `KSP` interface for linear solvers
3445   instead of working directly with matrix algebra routines such as this.
3446   See, e.g., `KSPCreate()`.
3447 
3448   Developer Note:
3449   The Fortran interface is not autogenerated as the
3450   interface definition cannot be generated correctly [due to `MatFactorInfo`]
3451 
3452 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatFactorInfo`, `MatGetFactor()`, `MatCholeskyFactorSymbolic()`, `MatCholeskyFactor()`, `MatLUFactorNumeric()`
3453 @*/
3454 PetscErrorCode MatCholeskyFactorNumeric(Mat fact, Mat mat, const MatFactorInfo *info)
3455 {
3456   MatFactorInfo tinfo;
3457 
3458   PetscFunctionBegin;
3459   PetscValidHeaderSpecific(fact, MAT_CLASSID, 1);
3460   PetscValidHeaderSpecific(mat, MAT_CLASSID, 2);
3461   PetscValidType(fact, 1);
3462   PetscValidType(mat, 2);
3463   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
3464   PetscCheck(mat->rmap->N == (fact)->rmap->N && mat->cmap->N == (fact)->cmap->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Mat fact: global dim %" PetscInt_FMT " should = %" PetscInt_FMT " %" PetscInt_FMT " should = %" PetscInt_FMT,
3465              mat->rmap->N, (fact)->rmap->N, mat->cmap->N, (fact)->cmap->N);
3466   MatCheckPreallocated(mat, 2);
3467   if (!info) {
3468     PetscCall(MatFactorInfoInitialize(&tinfo));
3469     info = &tinfo;
3470   }
3471 
3472   if (!fact->trivialsymbolic) PetscCall(PetscLogEventBegin(MAT_CholeskyFactorNumeric, mat, fact, 0, 0));
3473   else PetscCall(PetscLogEventBegin(MAT_CholeskyFactor, mat, fact, 0, 0));
3474   PetscUseTypeMethod(fact, choleskyfactornumeric, mat, info);
3475   if (!fact->trivialsymbolic) PetscCall(PetscLogEventEnd(MAT_CholeskyFactorNumeric, mat, fact, 0, 0));
3476   else PetscCall(PetscLogEventEnd(MAT_CholeskyFactor, mat, fact, 0, 0));
3477   PetscCall(MatViewFromOptions(fact, NULL, "-mat_factor_view"));
3478   PetscCall(PetscObjectStateIncrease((PetscObject)fact));
3479   PetscFunctionReturn(PETSC_SUCCESS);
3480 }
3481 
3482 /*@
3483   MatQRFactor - Performs in-place QR factorization of matrix.
3484 
3485   Collective
3486 
3487   Input Parameters:
3488 + mat  - the matrix
3489 . col  - column permutation
3490 - info - options for factorization, includes
3491 .vb
3492           fill - expected fill as ratio of original fill.
3493           dtcol - pivot tolerance (0 no pivot, 1 full column pivoting)
3494                    Run with the option -info to determine an optimal value to use
3495 .ve
3496 
3497   Level: developer
3498 
3499   Notes:
3500   Most users should employ the `KSP` interface for linear solvers
3501   instead of working directly with matrix algebra routines such as this.
3502   See, e.g., `KSPCreate()`.
3503 
3504   This changes the state of the matrix to a factored matrix; it cannot be used
3505   for example with `MatSetValues()` unless one first calls `MatSetUnfactored()`.
3506 
3507   Developer Note:
3508   The Fortran interface is not autogenerated as the
3509   interface definition cannot be generated correctly [due to MatFactorInfo]
3510 
3511 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatFactorInfo`, `MatGetFactor()`, `MatQRFactorSymbolic()`, `MatQRFactorNumeric()`, `MatLUFactor()`,
3512           `MatSetUnfactored()`
3513 @*/
3514 PetscErrorCode MatQRFactor(Mat mat, IS col, const MatFactorInfo *info)
3515 {
3516   PetscFunctionBegin;
3517   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
3518   if (col) PetscValidHeaderSpecific(col, IS_CLASSID, 2);
3519   if (info) PetscAssertPointer(info, 3);
3520   PetscValidType(mat, 1);
3521   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
3522   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
3523   MatCheckPreallocated(mat, 1);
3524   PetscCall(PetscLogEventBegin(MAT_QRFactor, mat, col, 0, 0));
3525   PetscUseMethod(mat, "MatQRFactor_C", (Mat, IS, const MatFactorInfo *), (mat, col, info));
3526   PetscCall(PetscLogEventEnd(MAT_QRFactor, mat, col, 0, 0));
3527   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
3528   PetscFunctionReturn(PETSC_SUCCESS);
3529 }
3530 
3531 /*@
3532   MatQRFactorSymbolic - Performs symbolic QR factorization of matrix.
3533   Call this routine after `MatGetFactor()` but before calling `MatQRFactorNumeric()`.
3534 
3535   Collective
3536 
3537   Input Parameters:
3538 + fact - the factor matrix obtained with `MatGetFactor()`
3539 . mat  - the matrix
3540 . col  - column permutation
3541 - info - options for factorization, includes
3542 .vb
3543           fill - expected fill as ratio of original fill.
3544           dtcol - pivot tolerance (0 no pivot, 1 full column pivoting)
3545                    Run with the option -info to determine an optimal value to use
3546 .ve
3547 
3548   Level: developer
3549 
3550   Note:
3551   Most users should employ the `KSP` interface for linear solvers
3552   instead of working directly with matrix algebra routines such as this.
3553   See, e.g., `KSPCreate()`.
3554 
3555   Developer Note:
3556   The Fortran interface is not autogenerated as the
3557   interface definition cannot be generated correctly [due to `MatFactorInfo`]
3558 
3559 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatGetFactor()`, `MatFactorInfo`, `MatQRFactor()`, `MatQRFactorNumeric()`, `MatLUFactor()`, `MatFactorInfoInitialize()`
3560 @*/
3561 PetscErrorCode MatQRFactorSymbolic(Mat fact, Mat mat, IS col, const MatFactorInfo *info)
3562 {
3563   MatFactorInfo tinfo;
3564 
3565   PetscFunctionBegin;
3566   PetscValidHeaderSpecific(fact, MAT_CLASSID, 1);
3567   PetscValidHeaderSpecific(mat, MAT_CLASSID, 2);
3568   if (col) PetscValidHeaderSpecific(col, IS_CLASSID, 3);
3569   if (info) PetscAssertPointer(info, 4);
3570   PetscValidType(fact, 1);
3571   PetscValidType(mat, 2);
3572   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
3573   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
3574   MatCheckPreallocated(mat, 2);
3575   if (!info) {
3576     PetscCall(MatFactorInfoInitialize(&tinfo));
3577     info = &tinfo;
3578   }
3579 
3580   if (!fact->trivialsymbolic) PetscCall(PetscLogEventBegin(MAT_QRFactorSymbolic, fact, mat, col, 0));
3581   PetscUseMethod(fact, "MatQRFactorSymbolic_C", (Mat, Mat, IS, const MatFactorInfo *), (fact, mat, col, info));
3582   if (!fact->trivialsymbolic) PetscCall(PetscLogEventEnd(MAT_QRFactorSymbolic, fact, mat, col, 0));
3583   PetscCall(PetscObjectStateIncrease((PetscObject)fact));
3584   PetscFunctionReturn(PETSC_SUCCESS);
3585 }
3586 
3587 /*@
3588   MatQRFactorNumeric - Performs numeric QR factorization of a matrix.
3589   Call this routine after first calling `MatGetFactor()`, and `MatQRFactorSymbolic()`.
3590 
3591   Collective
3592 
3593   Input Parameters:
3594 + fact - the factor matrix obtained with `MatGetFactor()`
3595 . mat  - the matrix
3596 - info - options for factorization
3597 
3598   Level: developer
3599 
3600   Notes:
3601   See `MatQRFactor()` for in-place factorization.
3602 
3603   Most users should employ the `KSP` interface for linear solvers
3604   instead of working directly with matrix algebra routines such as this.
3605   See, e.g., `KSPCreate()`.
3606 
3607   Developer Note:
3608   The Fortran interface is not autogenerated as the
3609   interface definition cannot be generated correctly [due to `MatFactorInfo`]
3610 
3611 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatFactorInfo`, `MatGetFactor()`, `MatQRFactor()`, `MatQRFactorSymbolic()`, `MatLUFactor()`
3612 @*/
3613 PetscErrorCode MatQRFactorNumeric(Mat fact, Mat mat, const MatFactorInfo *info)
3614 {
3615   MatFactorInfo tinfo;
3616 
3617   PetscFunctionBegin;
3618   PetscValidHeaderSpecific(fact, MAT_CLASSID, 1);
3619   PetscValidHeaderSpecific(mat, MAT_CLASSID, 2);
3620   PetscValidType(fact, 1);
3621   PetscValidType(mat, 2);
3622   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
3623   PetscCheck(mat->rmap->N == fact->rmap->N && mat->cmap->N == fact->cmap->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Mat fact: global dimensions are different %" PetscInt_FMT " should = %" PetscInt_FMT " %" PetscInt_FMT " should = %" PetscInt_FMT,
3624              mat->rmap->N, (fact)->rmap->N, mat->cmap->N, (fact)->cmap->N);
3625 
3626   MatCheckPreallocated(mat, 2);
3627   if (!info) {
3628     PetscCall(MatFactorInfoInitialize(&tinfo));
3629     info = &tinfo;
3630   }
3631 
3632   if (!fact->trivialsymbolic) PetscCall(PetscLogEventBegin(MAT_QRFactorNumeric, mat, fact, 0, 0));
3633   else PetscCall(PetscLogEventBegin(MAT_QRFactor, mat, fact, 0, 0));
3634   PetscUseMethod(fact, "MatQRFactorNumeric_C", (Mat, Mat, const MatFactorInfo *), (fact, mat, info));
3635   if (!fact->trivialsymbolic) PetscCall(PetscLogEventEnd(MAT_QRFactorNumeric, mat, fact, 0, 0));
3636   else PetscCall(PetscLogEventEnd(MAT_QRFactor, mat, fact, 0, 0));
3637   PetscCall(MatViewFromOptions(fact, NULL, "-mat_factor_view"));
3638   PetscCall(PetscObjectStateIncrease((PetscObject)fact));
3639   PetscFunctionReturn(PETSC_SUCCESS);
3640 }
3641 
3642 /*@
3643   MatSolve - Solves $A x = b$, given a factored matrix.
3644 
3645   Neighbor-wise Collective
3646 
3647   Input Parameters:
3648 + mat - the factored matrix
3649 - b   - the right-hand-side vector
3650 
3651   Output Parameter:
3652 . x - the result vector
3653 
3654   Level: developer
3655 
3656   Notes:
3657   The vectors `b` and `x` cannot be the same.  I.e., one cannot
3658   call `MatSolve`(A,x,x).
3659 
3660   Most users should employ the `KSP` interface for linear solvers
3661   instead of working directly with matrix algebra routines such as this.
3662   See, e.g., `KSPCreate()`.
3663 
3664 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatGetFactor()`, `MatLUFactor()`, `MatSolveAdd()`, `MatSolveTranspose()`, `MatSolveTransposeAdd()`
3665 @*/
3666 PetscErrorCode MatSolve(Mat mat, Vec b, Vec x)
3667 {
3668   PetscFunctionBegin;
3669   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
3670   PetscValidType(mat, 1);
3671   PetscValidHeaderSpecific(b, VEC_CLASSID, 2);
3672   PetscValidHeaderSpecific(x, VEC_CLASSID, 3);
3673   PetscCheckSameComm(mat, 1, b, 2);
3674   PetscCheckSameComm(mat, 1, x, 3);
3675   PetscCheck(x != b, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_IDN, "x and b must be different vectors");
3676   PetscCheck(mat->cmap->N == x->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec x: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->cmap->N, x->map->N);
3677   PetscCheck(mat->rmap->N == b->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec b: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->N, b->map->N);
3678   PetscCheck(mat->rmap->n == b->map->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Mat mat,Vec b: local dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->n, b->map->n);
3679   if (!mat->rmap->N && !mat->cmap->N) PetscFunctionReturn(PETSC_SUCCESS);
3680   MatCheckPreallocated(mat, 1);
3681 
3682   PetscCall(PetscLogEventBegin(MAT_Solve, mat, b, x, 0));
3683   PetscCall(VecFlag(x, mat->factorerrortype));
3684   if (mat->factorerrortype) {
3685     PetscCall(PetscInfo(mat, "MatFactorError %d\n", mat->factorerrortype));
3686   } else PetscUseTypeMethod(mat, solve, b, x);
3687   PetscCall(PetscLogEventEnd(MAT_Solve, mat, b, x, 0));
3688   PetscCall(PetscObjectStateIncrease((PetscObject)x));
3689   PetscFunctionReturn(PETSC_SUCCESS);
3690 }
3691 
3692 static PetscErrorCode MatMatSolve_Basic(Mat A, Mat B, Mat X, PetscBool trans)
3693 {
3694   Vec      b, x;
3695   PetscInt N, i;
3696   PetscErrorCode (*f)(Mat, Vec, Vec);
3697   PetscBool Abound, Bneedconv = PETSC_FALSE, Xneedconv = PETSC_FALSE;
3698 
3699   PetscFunctionBegin;
3700   if (A->factorerrortype) {
3701     PetscCall(PetscInfo(A, "MatFactorError %d\n", A->factorerrortype));
3702     PetscCall(MatSetInf(X));
3703     PetscFunctionReturn(PETSC_SUCCESS);
3704   }
3705   f = (!trans || (!A->ops->solvetranspose && A->symmetric)) ? A->ops->solve : A->ops->solvetranspose;
3706   PetscCheck(f, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Mat type %s", ((PetscObject)A)->type_name);
3707   PetscCall(MatBoundToCPU(A, &Abound));
3708   if (!Abound) {
3709     PetscCall(PetscObjectTypeCompareAny((PetscObject)B, &Bneedconv, MATSEQDENSE, MATMPIDENSE, ""));
3710     PetscCall(PetscObjectTypeCompareAny((PetscObject)X, &Xneedconv, MATSEQDENSE, MATMPIDENSE, ""));
3711   }
3712 #if PetscDefined(HAVE_CUDA)
3713   if (Bneedconv) PetscCall(MatConvert(B, MATDENSECUDA, MAT_INPLACE_MATRIX, &B));
3714   if (Xneedconv) PetscCall(MatConvert(X, MATDENSECUDA, MAT_INPLACE_MATRIX, &X));
3715 #elif PetscDefined(HAVE_HIP)
3716   if (Bneedconv) PetscCall(MatConvert(B, MATDENSEHIP, MAT_INPLACE_MATRIX, &B));
3717   if (Xneedconv) PetscCall(MatConvert(X, MATDENSEHIP, MAT_INPLACE_MATRIX, &X));
3718 #endif
3719   PetscCall(MatGetSize(B, NULL, &N));
3720   for (i = 0; i < N; i++) {
3721     PetscCall(MatDenseGetColumnVecRead(B, i, &b));
3722     PetscCall(MatDenseGetColumnVecWrite(X, i, &x));
3723     PetscCall((*f)(A, b, x));
3724     PetscCall(MatDenseRestoreColumnVecWrite(X, i, &x));
3725     PetscCall(MatDenseRestoreColumnVecRead(B, i, &b));
3726   }
3727   if (Bneedconv) PetscCall(MatConvert(B, MATDENSE, MAT_INPLACE_MATRIX, &B));
3728   if (Xneedconv) PetscCall(MatConvert(X, MATDENSE, MAT_INPLACE_MATRIX, &X));
3729   PetscFunctionReturn(PETSC_SUCCESS);
3730 }
3731 
3732 /*@
3733   MatMatSolve - Solves $A X = B$, given a factored matrix.
3734 
3735   Neighbor-wise Collective
3736 
3737   Input Parameters:
3738 + A - the factored matrix
3739 - B - the right-hand-side matrix `MATDENSE` (or sparse `MATAIJ`-- when using MUMPS)
3740 
3741   Output Parameter:
3742 . X - the result matrix (dense matrix)
3743 
3744   Level: developer
3745 
3746   Note:
3747   If `B` is a `MATDENSE` matrix then one can call `MatMatSolve`(A,B,B) except with `MATSOLVERMKL_CPARDISO`;
3748   otherwise, `B` and `X` cannot be the same.
3749 
3750 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatGetFactor()`, `MatSolve()`, `MatMatSolveTranspose()`, `MatLUFactor()`, `MatCholeskyFactor()`
3751 @*/
3752 PetscErrorCode MatMatSolve(Mat A, Mat B, Mat X)
3753 {
3754   PetscFunctionBegin;
3755   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
3756   PetscValidType(A, 1);
3757   PetscValidHeaderSpecific(B, MAT_CLASSID, 2);
3758   PetscValidHeaderSpecific(X, MAT_CLASSID, 3);
3759   PetscCheckSameComm(A, 1, B, 2);
3760   PetscCheckSameComm(A, 1, X, 3);
3761   PetscCheck(A->cmap->N == X->rmap->N, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Mat A,Mat X: global dim %" PetscInt_FMT " %" PetscInt_FMT, A->cmap->N, X->rmap->N);
3762   PetscCheck(A->rmap->N == B->rmap->N, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Mat A,Mat B: global dim %" PetscInt_FMT " %" PetscInt_FMT, A->rmap->N, B->rmap->N);
3763   PetscCheck(X->cmap->N == B->cmap->N, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Solution matrix must have same number of columns as rhs matrix");
3764   if (!A->rmap->N && !A->cmap->N) PetscFunctionReturn(PETSC_SUCCESS);
3765   MatCheckPreallocated(A, 1);
3766 
3767   PetscCall(PetscLogEventBegin(MAT_MatSolve, A, B, X, 0));
3768   if (!A->ops->matsolve) {
3769     PetscCall(PetscInfo(A, "Mat type %s using basic MatMatSolve\n", ((PetscObject)A)->type_name));
3770     PetscCall(MatMatSolve_Basic(A, B, X, PETSC_FALSE));
3771   } else PetscUseTypeMethod(A, matsolve, B, X);
3772   PetscCall(PetscLogEventEnd(MAT_MatSolve, A, B, X, 0));
3773   PetscCall(PetscObjectStateIncrease((PetscObject)X));
3774   PetscFunctionReturn(PETSC_SUCCESS);
3775 }
3776 
3777 /*@
3778   MatMatSolveTranspose - Solves $A^T X = B $, given a factored matrix.
3779 
3780   Neighbor-wise Collective
3781 
3782   Input Parameters:
3783 + A - the factored matrix
3784 - B - the right-hand-side matrix  (`MATDENSE` matrix)
3785 
3786   Output Parameter:
3787 . X - the result matrix (dense matrix)
3788 
3789   Level: developer
3790 
3791   Note:
3792   The matrices `B` and `X` cannot be the same.  I.e., one cannot
3793   call `MatMatSolveTranspose`(A,X,X).
3794 
3795 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatGetFactor()`, `MatSolveTranspose()`, `MatMatSolve()`, `MatLUFactor()`, `MatCholeskyFactor()`
3796 @*/
3797 PetscErrorCode MatMatSolveTranspose(Mat A, Mat B, Mat X)
3798 {
3799   PetscFunctionBegin;
3800   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
3801   PetscValidType(A, 1);
3802   PetscValidHeaderSpecific(B, MAT_CLASSID, 2);
3803   PetscValidHeaderSpecific(X, MAT_CLASSID, 3);
3804   PetscCheckSameComm(A, 1, B, 2);
3805   PetscCheckSameComm(A, 1, X, 3);
3806   PetscCheck(X != B, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_IDN, "X and B must be different matrices");
3807   PetscCheck(A->cmap->N == X->rmap->N, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Mat A,Mat X: global dim %" PetscInt_FMT " %" PetscInt_FMT, A->cmap->N, X->rmap->N);
3808   PetscCheck(A->rmap->N == B->rmap->N, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Mat A,Mat B: global dim %" PetscInt_FMT " %" PetscInt_FMT, A->rmap->N, B->rmap->N);
3809   PetscCheck(A->rmap->n == B->rmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Mat A,Mat B: local dim %" PetscInt_FMT " %" PetscInt_FMT, A->rmap->n, B->rmap->n);
3810   PetscCheck(X->cmap->N >= B->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Solution matrix must have same number of columns as rhs matrix");
3811   if (!A->rmap->N && !A->cmap->N) PetscFunctionReturn(PETSC_SUCCESS);
3812   MatCheckPreallocated(A, 1);
3813 
3814   PetscCall(PetscLogEventBegin(MAT_MatSolve, A, B, X, 0));
3815   if (!A->ops->matsolvetranspose) {
3816     PetscCall(PetscInfo(A, "Mat type %s using basic MatMatSolveTranspose\n", ((PetscObject)A)->type_name));
3817     PetscCall(MatMatSolve_Basic(A, B, X, PETSC_TRUE));
3818   } else PetscUseTypeMethod(A, matsolvetranspose, B, X);
3819   PetscCall(PetscLogEventEnd(MAT_MatSolve, A, B, X, 0));
3820   PetscCall(PetscObjectStateIncrease((PetscObject)X));
3821   PetscFunctionReturn(PETSC_SUCCESS);
3822 }
3823 
3824 /*@
3825   MatMatTransposeSolve - Solves $A X = B^T$, given a factored matrix.
3826 
3827   Neighbor-wise Collective
3828 
3829   Input Parameters:
3830 + A  - the factored matrix
3831 - Bt - the transpose of right-hand-side matrix as a `MATDENSE`
3832 
3833   Output Parameter:
3834 . X - the result matrix (dense matrix)
3835 
3836   Level: developer
3837 
3838   Note:
3839   For MUMPS, it only supports centralized sparse compressed column format on the host processor for right-hand side matrix. User must create `Bt` in sparse compressed row
3840   format on the host processor and call `MatMatTransposeSolve()` to implement MUMPS' `MatMatSolve()`.
3841 
3842 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatMatSolve()`, `MatMatSolveTranspose()`, `MatLUFactor()`, `MatCholeskyFactor()`
3843 @*/
3844 PetscErrorCode MatMatTransposeSolve(Mat A, Mat Bt, Mat X)
3845 {
3846   PetscFunctionBegin;
3847   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
3848   PetscValidType(A, 1);
3849   PetscValidHeaderSpecific(Bt, MAT_CLASSID, 2);
3850   PetscValidHeaderSpecific(X, MAT_CLASSID, 3);
3851   PetscCheckSameComm(A, 1, Bt, 2);
3852   PetscCheckSameComm(A, 1, X, 3);
3853 
3854   PetscCheck(X != Bt, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_IDN, "X and B must be different matrices");
3855   PetscCheck(A->cmap->N == X->rmap->N, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Mat A,Mat X: global dim %" PetscInt_FMT " %" PetscInt_FMT, A->cmap->N, X->rmap->N);
3856   PetscCheck(A->rmap->N == Bt->cmap->N, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Mat A,Mat Bt: global dim %" PetscInt_FMT " %" PetscInt_FMT, A->rmap->N, Bt->cmap->N);
3857   PetscCheck(X->cmap->N >= Bt->rmap->N, PetscObjectComm((PetscObject)X), PETSC_ERR_ARG_SIZ, "Solution matrix must have same number of columns as row number of the rhs matrix");
3858   if (!A->rmap->N && !A->cmap->N) PetscFunctionReturn(PETSC_SUCCESS);
3859   PetscCheck(A->factortype, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "Unfactored matrix");
3860   MatCheckPreallocated(A, 1);
3861 
3862   PetscCall(PetscLogEventBegin(MAT_MatTrSolve, A, Bt, X, 0));
3863   PetscUseTypeMethod(A, mattransposesolve, Bt, X);
3864   PetscCall(PetscLogEventEnd(MAT_MatTrSolve, A, Bt, X, 0));
3865   PetscCall(PetscObjectStateIncrease((PetscObject)X));
3866   PetscFunctionReturn(PETSC_SUCCESS);
3867 }
3868 
3869 /*@
3870   MatForwardSolve - Solves $ L x = b $, given a factored matrix, $A = LU $, or
3871   $U^T*D^(1/2) x = b$, given a factored symmetric matrix, $A = U^T*D*U$,
3872 
3873   Neighbor-wise Collective
3874 
3875   Input Parameters:
3876 + mat - the factored matrix
3877 - b   - the right-hand-side vector
3878 
3879   Output Parameter:
3880 . x - the result vector
3881 
3882   Level: developer
3883 
3884   Notes:
3885   `MatSolve()` should be used for most applications, as it performs
3886   a forward solve followed by a backward solve.
3887 
3888   The vectors `b` and `x` cannot be the same,  i.e., one cannot
3889   call `MatForwardSolve`(A,x,x).
3890 
3891   For matrix in `MATSEQBAIJ` format with block size larger than 1,
3892   the diagonal blocks are not implemented as $D = D^(1/2) * D^(1/2)$ yet.
3893   `MatForwardSolve()` solves $U^T*D y = b$, and
3894   `MatBackwardSolve()` solves $U x = y$.
3895   Thus they do not provide a symmetric preconditioner.
3896 
3897 .seealso: [](ch_matrices), `Mat`, `MatBackwardSolve()`, `MatGetFactor()`, `MatSolve()`
3898 @*/
3899 PetscErrorCode MatForwardSolve(Mat mat, Vec b, Vec x)
3900 {
3901   PetscFunctionBegin;
3902   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
3903   PetscValidType(mat, 1);
3904   PetscValidHeaderSpecific(b, VEC_CLASSID, 2);
3905   PetscValidHeaderSpecific(x, VEC_CLASSID, 3);
3906   PetscCheckSameComm(mat, 1, b, 2);
3907   PetscCheckSameComm(mat, 1, x, 3);
3908   PetscCheck(x != b, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_IDN, "x and b must be different vectors");
3909   PetscCheck(mat->cmap->N == x->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec x: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->cmap->N, x->map->N);
3910   PetscCheck(mat->rmap->N == b->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec b: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->N, b->map->N);
3911   PetscCheck(mat->rmap->n == b->map->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Mat mat,Vec b: local dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->n, b->map->n);
3912   if (!mat->rmap->N && !mat->cmap->N) PetscFunctionReturn(PETSC_SUCCESS);
3913   MatCheckPreallocated(mat, 1);
3914 
3915   PetscCall(PetscLogEventBegin(MAT_ForwardSolve, mat, b, x, 0));
3916   PetscUseTypeMethod(mat, forwardsolve, b, x);
3917   PetscCall(PetscLogEventEnd(MAT_ForwardSolve, mat, b, x, 0));
3918   PetscCall(PetscObjectStateIncrease((PetscObject)x));
3919   PetscFunctionReturn(PETSC_SUCCESS);
3920 }
3921 
3922 /*@
3923   MatBackwardSolve - Solves $U x = b$, given a factored matrix, $A = LU$.
3924   $D^(1/2) U x = b$, given a factored symmetric matrix, $A = U^T*D*U$,
3925 
3926   Neighbor-wise Collective
3927 
3928   Input Parameters:
3929 + mat - the factored matrix
3930 - b   - the right-hand-side vector
3931 
3932   Output Parameter:
3933 . x - the result vector
3934 
3935   Level: developer
3936 
3937   Notes:
3938   `MatSolve()` should be used for most applications, as it performs
3939   a forward solve followed by a backward solve.
3940 
3941   The vectors `b` and `x` cannot be the same.  I.e., one cannot
3942   call `MatBackwardSolve`(A,x,x).
3943 
3944   For matrix in `MATSEQBAIJ` format with block size larger than 1,
3945   the diagonal blocks are not implemented as $D = D^(1/2) * D^(1/2)$ yet.
3946   `MatForwardSolve()` solves $U^T*D y = b$, and
3947   `MatBackwardSolve()` solves $U x = y$.
3948   Thus they do not provide a symmetric preconditioner.
3949 
3950 .seealso: [](ch_matrices), `Mat`, `MatForwardSolve()`, `MatGetFactor()`, `MatSolve()`
3951 @*/
3952 PetscErrorCode MatBackwardSolve(Mat mat, Vec b, Vec x)
3953 {
3954   PetscFunctionBegin;
3955   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
3956   PetscValidType(mat, 1);
3957   PetscValidHeaderSpecific(b, VEC_CLASSID, 2);
3958   PetscValidHeaderSpecific(x, VEC_CLASSID, 3);
3959   PetscCheckSameComm(mat, 1, b, 2);
3960   PetscCheckSameComm(mat, 1, x, 3);
3961   PetscCheck(x != b, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_IDN, "x and b must be different vectors");
3962   PetscCheck(mat->cmap->N == x->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec x: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->cmap->N, x->map->N);
3963   PetscCheck(mat->rmap->N == b->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec b: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->N, b->map->N);
3964   PetscCheck(mat->rmap->n == b->map->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Mat mat,Vec b: local dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->n, b->map->n);
3965   if (!mat->rmap->N && !mat->cmap->N) PetscFunctionReturn(PETSC_SUCCESS);
3966   MatCheckPreallocated(mat, 1);
3967 
3968   PetscCall(PetscLogEventBegin(MAT_BackwardSolve, mat, b, x, 0));
3969   PetscUseTypeMethod(mat, backwardsolve, b, x);
3970   PetscCall(PetscLogEventEnd(MAT_BackwardSolve, mat, b, x, 0));
3971   PetscCall(PetscObjectStateIncrease((PetscObject)x));
3972   PetscFunctionReturn(PETSC_SUCCESS);
3973 }
3974 
3975 /*@
3976   MatSolveAdd - Computes $x = y + A^{-1}*b$, given a factored matrix.
3977 
3978   Neighbor-wise Collective
3979 
3980   Input Parameters:
3981 + mat - the factored matrix
3982 . b   - the right-hand-side vector
3983 - y   - the vector to be added to
3984 
3985   Output Parameter:
3986 . x - the result vector
3987 
3988   Level: developer
3989 
3990   Note:
3991   The vectors `b` and `x` cannot be the same.  I.e., one cannot
3992   call `MatSolveAdd`(A,x,y,x).
3993 
3994 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatSolve()`, `MatGetFactor()`, `MatSolveTranspose()`, `MatSolveTransposeAdd()`
3995 @*/
3996 PetscErrorCode MatSolveAdd(Mat mat, Vec b, Vec y, Vec x)
3997 {
3998   PetscScalar one = 1.0;
3999   Vec         tmp;
4000 
4001   PetscFunctionBegin;
4002   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
4003   PetscValidType(mat, 1);
4004   PetscValidHeaderSpecific(y, VEC_CLASSID, 3);
4005   PetscValidHeaderSpecific(b, VEC_CLASSID, 2);
4006   PetscValidHeaderSpecific(x, VEC_CLASSID, 4);
4007   PetscCheckSameComm(mat, 1, b, 2);
4008   PetscCheckSameComm(mat, 1, y, 3);
4009   PetscCheckSameComm(mat, 1, x, 4);
4010   PetscCheck(x != b, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_IDN, "x and b must be different vectors");
4011   PetscCheck(mat->cmap->N == x->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec x: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->cmap->N, x->map->N);
4012   PetscCheck(mat->rmap->N == b->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec b: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->N, b->map->N);
4013   PetscCheck(mat->rmap->N == y->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec y: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->N, y->map->N);
4014   PetscCheck(mat->rmap->n == b->map->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Mat mat,Vec b: local dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->n, b->map->n);
4015   PetscCheck(x->map->n == y->map->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Vec x,Vec y: local dim %" PetscInt_FMT " %" PetscInt_FMT, x->map->n, y->map->n);
4016   if (!mat->rmap->N && !mat->cmap->N) PetscFunctionReturn(PETSC_SUCCESS);
4017   MatCheckPreallocated(mat, 1);
4018 
4019   PetscCall(PetscLogEventBegin(MAT_SolveAdd, mat, b, x, y));
4020   PetscCall(VecFlag(x, mat->factorerrortype));
4021   if (mat->factorerrortype) {
4022     PetscCall(PetscInfo(mat, "MatFactorError %d\n", mat->factorerrortype));
4023   } else if (mat->ops->solveadd) {
4024     PetscUseTypeMethod(mat, solveadd, b, y, x);
4025   } else {
4026     /* do the solve then the add manually */
4027     if (x != y) {
4028       PetscCall(MatSolve(mat, b, x));
4029       PetscCall(VecAXPY(x, one, y));
4030     } else {
4031       PetscCall(VecDuplicate(x, &tmp));
4032       PetscCall(VecCopy(x, tmp));
4033       PetscCall(MatSolve(mat, b, x));
4034       PetscCall(VecAXPY(x, one, tmp));
4035       PetscCall(VecDestroy(&tmp));
4036     }
4037   }
4038   PetscCall(PetscLogEventEnd(MAT_SolveAdd, mat, b, x, y));
4039   PetscCall(PetscObjectStateIncrease((PetscObject)x));
4040   PetscFunctionReturn(PETSC_SUCCESS);
4041 }
4042 
4043 /*@
4044   MatSolveTranspose - Solves $A^T x = b$, given a factored matrix.
4045 
4046   Neighbor-wise Collective
4047 
4048   Input Parameters:
4049 + mat - the factored matrix
4050 - b   - the right-hand-side vector
4051 
4052   Output Parameter:
4053 . x - the result vector
4054 
4055   Level: developer
4056 
4057   Notes:
4058   The vectors `b` and `x` cannot be the same.  I.e., one cannot
4059   call `MatSolveTranspose`(A,x,x).
4060 
4061   Most users should employ the `KSP` interface for linear solvers
4062   instead of working directly with matrix algebra routines such as this.
4063   See, e.g., `KSPCreate()`.
4064 
4065 .seealso: [](ch_matrices), `Mat`, `MatGetFactor()`, `KSP`, `MatSolve()`, `MatSolveAdd()`, `MatSolveTransposeAdd()`
4066 @*/
4067 PetscErrorCode MatSolveTranspose(Mat mat, Vec b, Vec x)
4068 {
4069   PetscErrorCode (*f)(Mat, Vec, Vec) = (!mat->ops->solvetranspose && mat->symmetric) ? mat->ops->solve : mat->ops->solvetranspose;
4070 
4071   PetscFunctionBegin;
4072   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
4073   PetscValidType(mat, 1);
4074   PetscValidHeaderSpecific(b, VEC_CLASSID, 2);
4075   PetscValidHeaderSpecific(x, VEC_CLASSID, 3);
4076   PetscCheckSameComm(mat, 1, b, 2);
4077   PetscCheckSameComm(mat, 1, x, 3);
4078   PetscCheck(x != b, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_IDN, "x and b must be different vectors");
4079   PetscCheck(mat->rmap->N == x->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec x: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->N, x->map->N);
4080   PetscCheck(mat->cmap->N == b->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec b: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->cmap->N, b->map->N);
4081   if (!mat->rmap->N && !mat->cmap->N) PetscFunctionReturn(PETSC_SUCCESS);
4082   MatCheckPreallocated(mat, 1);
4083   PetscCall(PetscLogEventBegin(MAT_SolveTranspose, mat, b, x, 0));
4084   PetscCall(VecFlag(x, mat->factorerrortype));
4085   if (mat->factorerrortype) {
4086     PetscCall(PetscInfo(mat, "MatFactorError %d\n", mat->factorerrortype));
4087   } else {
4088     PetscCheck(f, PetscObjectComm((PetscObject)mat), PETSC_ERR_SUP, "Matrix type %s", ((PetscObject)mat)->type_name);
4089     PetscCall((*f)(mat, b, x));
4090   }
4091   PetscCall(PetscLogEventEnd(MAT_SolveTranspose, mat, b, x, 0));
4092   PetscCall(PetscObjectStateIncrease((PetscObject)x));
4093   PetscFunctionReturn(PETSC_SUCCESS);
4094 }
4095 
4096 /*@
4097   MatSolveTransposeAdd - Computes $x = y + A^{-T} b$
4098   factored matrix.
4099 
4100   Neighbor-wise Collective
4101 
4102   Input Parameters:
4103 + mat - the factored matrix
4104 . b   - the right-hand-side vector
4105 - y   - the vector to be added to
4106 
4107   Output Parameter:
4108 . x - the result vector
4109 
4110   Level: developer
4111 
4112   Note:
4113   The vectors `b` and `x` cannot be the same.  I.e., one cannot
4114   call `MatSolveTransposeAdd`(A,x,y,x).
4115 
4116 .seealso: [](ch_matrices), `Mat`, `MatGetFactor()`, `MatSolve()`, `MatSolveAdd()`, `MatSolveTranspose()`
4117 @*/
4118 PetscErrorCode MatSolveTransposeAdd(Mat mat, Vec b, Vec y, Vec x)
4119 {
4120   PetscScalar one = 1.0;
4121   Vec         tmp;
4122   PetscErrorCode (*f)(Mat, Vec, Vec, Vec) = (!mat->ops->solvetransposeadd && mat->symmetric) ? mat->ops->solveadd : mat->ops->solvetransposeadd;
4123 
4124   PetscFunctionBegin;
4125   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
4126   PetscValidType(mat, 1);
4127   PetscValidHeaderSpecific(y, VEC_CLASSID, 3);
4128   PetscValidHeaderSpecific(b, VEC_CLASSID, 2);
4129   PetscValidHeaderSpecific(x, VEC_CLASSID, 4);
4130   PetscCheckSameComm(mat, 1, b, 2);
4131   PetscCheckSameComm(mat, 1, y, 3);
4132   PetscCheckSameComm(mat, 1, x, 4);
4133   PetscCheck(x != b, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_IDN, "x and b must be different vectors");
4134   PetscCheck(mat->rmap->N == x->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec x: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->N, x->map->N);
4135   PetscCheck(mat->cmap->N == b->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec b: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->cmap->N, b->map->N);
4136   PetscCheck(mat->cmap->N == y->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec y: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->cmap->N, y->map->N);
4137   PetscCheck(x->map->n == y->map->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Vec x,Vec y: local dim %" PetscInt_FMT " %" PetscInt_FMT, x->map->n, y->map->n);
4138   if (!mat->rmap->N && !mat->cmap->N) PetscFunctionReturn(PETSC_SUCCESS);
4139   MatCheckPreallocated(mat, 1);
4140 
4141   PetscCall(PetscLogEventBegin(MAT_SolveTransposeAdd, mat, b, x, y));
4142   PetscCall(VecFlag(x, mat->factorerrortype));
4143   if (mat->factorerrortype) {
4144     PetscCall(PetscInfo(mat, "MatFactorError %d\n", mat->factorerrortype));
4145   } else if (f) {
4146     PetscCall((*f)(mat, b, y, x));
4147   } else {
4148     /* do the solve then the add manually */
4149     if (x != y) {
4150       PetscCall(MatSolveTranspose(mat, b, x));
4151       PetscCall(VecAXPY(x, one, y));
4152     } else {
4153       PetscCall(VecDuplicate(x, &tmp));
4154       PetscCall(VecCopy(x, tmp));
4155       PetscCall(MatSolveTranspose(mat, b, x));
4156       PetscCall(VecAXPY(x, one, tmp));
4157       PetscCall(VecDestroy(&tmp));
4158     }
4159   }
4160   PetscCall(PetscLogEventEnd(MAT_SolveTransposeAdd, mat, b, x, y));
4161   PetscCall(PetscObjectStateIncrease((PetscObject)x));
4162   PetscFunctionReturn(PETSC_SUCCESS);
4163 }
4164 
4165 // PetscClangLinter pragma disable: -fdoc-section-header-unknown
4166 /*@
4167   MatSOR - Computes relaxation (SOR, Gauss-Seidel) sweeps.
4168 
4169   Neighbor-wise Collective
4170 
4171   Input Parameters:
4172 + mat   - the matrix
4173 . b     - the right-hand side
4174 . omega - the relaxation factor
4175 . flag  - flag indicating the type of SOR (see below)
4176 . shift - diagonal shift
4177 . its   - the number of iterations
4178 - lits  - the number of local iterations
4179 
4180   Output Parameter:
4181 . x - the solution (can contain an initial guess, use option `SOR_ZERO_INITIAL_GUESS` to indicate no guess)
4182 
4183   SOR Flags:
4184 +     `SOR_FORWARD_SWEEP` - forward SOR
4185 .     `SOR_BACKWARD_SWEEP` - backward SOR
4186 .     `SOR_SYMMETRIC_SWEEP` - SSOR (symmetric SOR)
4187 .     `SOR_LOCAL_FORWARD_SWEEP` - local forward SOR
4188 .     `SOR_LOCAL_BACKWARD_SWEEP` - local forward SOR
4189 .     `SOR_LOCAL_SYMMETRIC_SWEEP` - local SSOR
4190 .     `SOR_EISENSTAT` - SOR with Eisenstat trick
4191 .     `SOR_APPLY_UPPER`, `SOR_APPLY_LOWER` - applies
4192   upper/lower triangular part of matrix to
4193   vector (with omega)
4194 -     `SOR_ZERO_INITIAL_GUESS` - zero initial guess
4195 
4196   Level: developer
4197 
4198   Notes:
4199   `SOR_LOCAL_FORWARD_SWEEP`, `SOR_LOCAL_BACKWARD_SWEEP`, and
4200   `SOR_LOCAL_SYMMETRIC_SWEEP` perform separate independent smoothings
4201   on each processor.
4202 
4203   Application programmers will not generally use `MatSOR()` directly,
4204   but instead will employ the `KSP`/`PC` interface.
4205 
4206   For `MATBAIJ`, `MATSBAIJ`, and `MATAIJ` matrices with Inodes this does a block SOR smoothing, otherwise it does a pointwise smoothing
4207 
4208   Most users should employ the `KSP` interface for linear solvers
4209   instead of working directly with matrix algebra routines such as this.
4210   See, e.g., `KSPCreate()`.
4211 
4212   Vectors `x` and `b` CANNOT be the same
4213 
4214   The flags are implemented as bitwise inclusive or operations.
4215   For example, use (`SOR_ZERO_INITIAL_GUESS` | `SOR_SYMMETRIC_SWEEP`)
4216   to specify a zero initial guess for SSOR.
4217 
4218   Developer Note:
4219   We should add block SOR support for `MATAIJ` matrices with block size set to great than one and no inodes
4220 
4221 .seealso: [](ch_matrices), `Mat`, `MatMult()`, `KSP`, `PC`, `MatGetFactor()`
4222 @*/
4223 PetscErrorCode MatSOR(Mat mat, Vec b, PetscReal omega, MatSORType flag, PetscReal shift, PetscInt its, PetscInt lits, Vec x)
4224 {
4225   PetscFunctionBegin;
4226   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
4227   PetscValidType(mat, 1);
4228   PetscValidHeaderSpecific(b, VEC_CLASSID, 2);
4229   PetscValidHeaderSpecific(x, VEC_CLASSID, 8);
4230   PetscCheckSameComm(mat, 1, b, 2);
4231   PetscCheckSameComm(mat, 1, x, 8);
4232   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
4233   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
4234   PetscCheck(mat->cmap->N == x->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec x: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->cmap->N, x->map->N);
4235   PetscCheck(mat->rmap->N == b->map->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_SIZ, "Mat mat,Vec b: global dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->N, b->map->N);
4236   PetscCheck(mat->rmap->n == b->map->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Mat mat,Vec b: local dim %" PetscInt_FMT " %" PetscInt_FMT, mat->rmap->n, b->map->n);
4237   PetscCheck(its > 0, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Relaxation requires global its %" PetscInt_FMT " positive", its);
4238   PetscCheck(lits > 0, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Relaxation requires local its %" PetscInt_FMT " positive", lits);
4239   PetscCheck(b != x, PETSC_COMM_SELF, PETSC_ERR_ARG_IDN, "b and x vector cannot be the same");
4240 
4241   MatCheckPreallocated(mat, 1);
4242   PetscCall(PetscLogEventBegin(MAT_SOR, mat, b, x, 0));
4243   PetscUseTypeMethod(mat, sor, b, omega, flag, shift, its, lits, x);
4244   PetscCall(PetscLogEventEnd(MAT_SOR, mat, b, x, 0));
4245   PetscCall(PetscObjectStateIncrease((PetscObject)x));
4246   PetscFunctionReturn(PETSC_SUCCESS);
4247 }
4248 
4249 /*
4250       Default matrix copy routine.
4251 */
4252 PetscErrorCode MatCopy_Basic(Mat A, Mat B, MatStructure str)
4253 {
4254   PetscInt           i, rstart = 0, rend = 0, nz;
4255   const PetscInt    *cwork;
4256   const PetscScalar *vwork;
4257 
4258   PetscFunctionBegin;
4259   if (B->assembled) PetscCall(MatZeroEntries(B));
4260   if (str == SAME_NONZERO_PATTERN) {
4261     PetscCall(MatGetOwnershipRange(A, &rstart, &rend));
4262     for (i = rstart; i < rend; i++) {
4263       PetscCall(MatGetRow(A, i, &nz, &cwork, &vwork));
4264       PetscCall(MatSetValues(B, 1, &i, nz, cwork, vwork, INSERT_VALUES));
4265       PetscCall(MatRestoreRow(A, i, &nz, &cwork, &vwork));
4266     }
4267   } else {
4268     PetscCall(MatAYPX(B, 0.0, A, str));
4269   }
4270   PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY));
4271   PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY));
4272   PetscFunctionReturn(PETSC_SUCCESS);
4273 }
4274 
4275 /*@
4276   MatCopy - Copies a matrix to another matrix.
4277 
4278   Collective
4279 
4280   Input Parameters:
4281 + A   - the matrix
4282 - str - `SAME_NONZERO_PATTERN` or `DIFFERENT_NONZERO_PATTERN`
4283 
4284   Output Parameter:
4285 . B - where the copy is put
4286 
4287   Level: intermediate
4288 
4289   Notes:
4290   If you use `SAME_NONZERO_PATTERN`, then the two matrices must have the same nonzero pattern or the routine will crash.
4291 
4292   `MatCopy()` copies the matrix entries of a matrix to another existing
4293   matrix (after first zeroing the second matrix).  A related routine is
4294   `MatConvert()`, which first creates a new matrix and then copies the data.
4295 
4296 .seealso: [](ch_matrices), `Mat`, `MatConvert()`, `MatDuplicate()`
4297 @*/
4298 PetscErrorCode MatCopy(Mat A, Mat B, MatStructure str)
4299 {
4300   PetscInt i;
4301 
4302   PetscFunctionBegin;
4303   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
4304   PetscValidHeaderSpecific(B, MAT_CLASSID, 2);
4305   PetscValidType(A, 1);
4306   PetscValidType(B, 2);
4307   PetscCheckSameComm(A, 1, B, 2);
4308   MatCheckPreallocated(B, 2);
4309   PetscCheck(A->assembled, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
4310   PetscCheck(!A->factortype, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
4311   PetscCheck(A->rmap->N == B->rmap->N && A->cmap->N == B->cmap->N, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Mat A,Mat B: global dim (%" PetscInt_FMT ",%" PetscInt_FMT ") (%" PetscInt_FMT ",%" PetscInt_FMT ")", A->rmap->N, B->rmap->N,
4312              A->cmap->N, B->cmap->N);
4313   MatCheckPreallocated(A, 1);
4314   if (A == B) PetscFunctionReturn(PETSC_SUCCESS);
4315 
4316   PetscCall(PetscLogEventBegin(MAT_Copy, A, B, 0, 0));
4317   if (A->ops->copy) PetscUseTypeMethod(A, copy, B, str);
4318   else PetscCall(MatCopy_Basic(A, B, str));
4319 
4320   B->stencil.dim = A->stencil.dim;
4321   B->stencil.noc = A->stencil.noc;
4322   for (i = 0; i <= A->stencil.dim + (A->stencil.noc ? 0 : -1); i++) {
4323     B->stencil.dims[i]   = A->stencil.dims[i];
4324     B->stencil.starts[i] = A->stencil.starts[i];
4325   }
4326 
4327   PetscCall(PetscLogEventEnd(MAT_Copy, A, B, 0, 0));
4328   PetscCall(PetscObjectStateIncrease((PetscObject)B));
4329   PetscFunctionReturn(PETSC_SUCCESS);
4330 }
4331 
4332 /*@
4333   MatConvert - Converts a matrix to another matrix, either of the same
4334   or different type.
4335 
4336   Collective
4337 
4338   Input Parameters:
4339 + mat     - the matrix
4340 . newtype - new matrix type.  Use `MATSAME` to create a new matrix of the
4341             same type as the original matrix.
4342 - reuse   - denotes if the destination matrix is to be created or reused.
4343             Use `MAT_INPLACE_MATRIX` for inplace conversion (that is when you want the input mat to be changed to contain the matrix in the new format), otherwise use
4344             `MAT_INITIAL_MATRIX` or `MAT_REUSE_MATRIX` (can only be used after the first call was made with `MAT_INITIAL_MATRIX`, causes the matrix space in M to be reused).
4345 
4346   Output Parameter:
4347 . M - pointer to place new matrix
4348 
4349   Level: intermediate
4350 
4351   Notes:
4352   `MatConvert()` first creates a new matrix and then copies the data from
4353   the first matrix.  A related routine is `MatCopy()`, which copies the matrix
4354   entries of one matrix to another already existing matrix context.
4355 
4356   Cannot be used to convert a sequential matrix to parallel or parallel to sequential,
4357   the MPI communicator of the generated matrix is always the same as the communicator
4358   of the input matrix.
4359 
4360 .seealso: [](ch_matrices), `Mat`, `MatCopy()`, `MatDuplicate()`, `MAT_INITIAL_MATRIX`, `MAT_REUSE_MATRIX`, `MAT_INPLACE_MATRIX`
4361 @*/
4362 PetscErrorCode MatConvert(Mat mat, MatType newtype, MatReuse reuse, Mat *M)
4363 {
4364   PetscBool  sametype, issame, flg;
4365   PetscBool3 issymmetric, ishermitian;
4366   char       convname[256], mtype[256];
4367   Mat        B;
4368 
4369   PetscFunctionBegin;
4370   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
4371   PetscValidType(mat, 1);
4372   PetscAssertPointer(M, 4);
4373   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
4374   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
4375   MatCheckPreallocated(mat, 1);
4376 
4377   PetscCall(PetscOptionsGetString(((PetscObject)mat)->options, ((PetscObject)mat)->prefix, "-matconvert_type", mtype, sizeof(mtype), &flg));
4378   if (flg) newtype = mtype;
4379 
4380   PetscCall(PetscObjectTypeCompare((PetscObject)mat, newtype, &sametype));
4381   PetscCall(PetscStrcmp(newtype, "same", &issame));
4382   PetscCheck(!(reuse == MAT_INPLACE_MATRIX) || !(mat != *M), PetscObjectComm((PetscObject)mat), PETSC_ERR_SUP, "MAT_INPLACE_MATRIX requires same input and output matrix");
4383   if (reuse == MAT_REUSE_MATRIX) {
4384     PetscValidHeaderSpecific(*M, MAT_CLASSID, 4);
4385     PetscCheck(mat != *M, PetscObjectComm((PetscObject)mat), PETSC_ERR_SUP, "MAT_REUSE_MATRIX means reuse matrix in final argument, perhaps you mean MAT_INPLACE_MATRIX");
4386   }
4387 
4388   if ((reuse == MAT_INPLACE_MATRIX) && (issame || sametype)) {
4389     PetscCall(PetscInfo(mat, "Early return for inplace %s %d %d\n", ((PetscObject)mat)->type_name, sametype, issame));
4390     PetscFunctionReturn(PETSC_SUCCESS);
4391   }
4392 
4393   /* Cache Mat options because some converters use MatHeaderReplace  */
4394   issymmetric = mat->symmetric;
4395   ishermitian = mat->hermitian;
4396 
4397   if ((sametype || issame) && (reuse == MAT_INITIAL_MATRIX) && mat->ops->duplicate) {
4398     PetscCall(PetscInfo(mat, "Calling duplicate for initial matrix %s %d %d\n", ((PetscObject)mat)->type_name, sametype, issame));
4399     PetscUseTypeMethod(mat, duplicate, MAT_COPY_VALUES, M);
4400   } else {
4401     PetscErrorCode (*conv)(Mat, MatType, MatReuse, Mat *) = NULL;
4402     const char *prefix[3]                                 = {"seq", "mpi", ""};
4403     PetscInt    i;
4404     /*
4405        Order of precedence:
4406        0) See if newtype is a superclass of the current matrix.
4407        1) See if a specialized converter is known to the current matrix.
4408        2) See if a specialized converter is known to the desired matrix class.
4409        3) See if a good general converter is registered for the desired class
4410           (as of 6/27/03 only MATMPIADJ falls into this category).
4411        4) See if a good general converter is known for the current matrix.
4412        5) Use a really basic converter.
4413     */
4414 
4415     /* 0) See if newtype is a superclass of the current matrix.
4416           i.e mat is mpiaij and newtype is aij */
4417     for (i = 0; i < 2; i++) {
4418       PetscCall(PetscStrncpy(convname, prefix[i], sizeof(convname)));
4419       PetscCall(PetscStrlcat(convname, newtype, sizeof(convname)));
4420       PetscCall(PetscStrcmp(convname, ((PetscObject)mat)->type_name, &flg));
4421       PetscCall(PetscInfo(mat, "Check superclass %s %s -> %d\n", convname, ((PetscObject)mat)->type_name, flg));
4422       if (flg) {
4423         if (reuse == MAT_INPLACE_MATRIX) {
4424           PetscCall(PetscInfo(mat, "Early return\n"));
4425           PetscFunctionReturn(PETSC_SUCCESS);
4426         } else if (reuse == MAT_INITIAL_MATRIX && mat->ops->duplicate) {
4427           PetscCall(PetscInfo(mat, "Calling MatDuplicate\n"));
4428           PetscUseTypeMethod(mat, duplicate, MAT_COPY_VALUES, M);
4429           PetscFunctionReturn(PETSC_SUCCESS);
4430         } else if (reuse == MAT_REUSE_MATRIX && mat->ops->copy) {
4431           PetscCall(PetscInfo(mat, "Calling MatCopy\n"));
4432           PetscCall(MatCopy(mat, *M, SAME_NONZERO_PATTERN));
4433           PetscFunctionReturn(PETSC_SUCCESS);
4434         }
4435       }
4436     }
4437     /* 1) See if a specialized converter is known to the current matrix and the desired class */
4438     for (i = 0; i < 3; i++) {
4439       PetscCall(PetscStrncpy(convname, "MatConvert_", sizeof(convname)));
4440       PetscCall(PetscStrlcat(convname, ((PetscObject)mat)->type_name, sizeof(convname)));
4441       PetscCall(PetscStrlcat(convname, "_", sizeof(convname)));
4442       PetscCall(PetscStrlcat(convname, prefix[i], sizeof(convname)));
4443       PetscCall(PetscStrlcat(convname, issame ? ((PetscObject)mat)->type_name : newtype, sizeof(convname)));
4444       PetscCall(PetscStrlcat(convname, "_C", sizeof(convname)));
4445       PetscCall(PetscObjectQueryFunction((PetscObject)mat, convname, &conv));
4446       PetscCall(PetscInfo(mat, "Check specialized (1) %s (%s) -> %d\n", convname, ((PetscObject)mat)->type_name, !!conv));
4447       if (conv) goto foundconv;
4448     }
4449 
4450     /* 2)  See if a specialized converter is known to the desired matrix class. */
4451     PetscCall(MatCreate(PetscObjectComm((PetscObject)mat), &B));
4452     PetscCall(MatSetSizes(B, mat->rmap->n, mat->cmap->n, mat->rmap->N, mat->cmap->N));
4453     PetscCall(MatSetType(B, newtype));
4454     for (i = 0; i < 3; i++) {
4455       PetscCall(PetscStrncpy(convname, "MatConvert_", sizeof(convname)));
4456       PetscCall(PetscStrlcat(convname, ((PetscObject)mat)->type_name, sizeof(convname)));
4457       PetscCall(PetscStrlcat(convname, "_", sizeof(convname)));
4458       PetscCall(PetscStrlcat(convname, prefix[i], sizeof(convname)));
4459       PetscCall(PetscStrlcat(convname, newtype, sizeof(convname)));
4460       PetscCall(PetscStrlcat(convname, "_C", sizeof(convname)));
4461       PetscCall(PetscObjectQueryFunction((PetscObject)B, convname, &conv));
4462       PetscCall(PetscInfo(mat, "Check specialized (2) %s (%s) -> %d\n", convname, ((PetscObject)B)->type_name, !!conv));
4463       if (conv) {
4464         PetscCall(MatDestroy(&B));
4465         goto foundconv;
4466       }
4467     }
4468 
4469     /* 3) See if a good general converter is registered for the desired class */
4470     conv = B->ops->convertfrom;
4471     PetscCall(PetscInfo(mat, "Check convertfrom (%s) -> %d\n", ((PetscObject)B)->type_name, !!conv));
4472     PetscCall(MatDestroy(&B));
4473     if (conv) goto foundconv;
4474 
4475     /* 4) See if a good general converter is known for the current matrix */
4476     if (mat->ops->convert) conv = mat->ops->convert;
4477     PetscCall(PetscInfo(mat, "Check general convert (%s) -> %d\n", ((PetscObject)mat)->type_name, !!conv));
4478     if (conv) goto foundconv;
4479 
4480     /* 5) Use a really basic converter. */
4481     PetscCall(PetscInfo(mat, "Using MatConvert_Basic\n"));
4482     conv = MatConvert_Basic;
4483 
4484   foundconv:
4485     PetscCall(PetscLogEventBegin(MAT_Convert, mat, 0, 0, 0));
4486     PetscCall((*conv)(mat, newtype, reuse, M));
4487     if (mat->rmap->mapping && mat->cmap->mapping && !(*M)->rmap->mapping && !(*M)->cmap->mapping) {
4488       /* the block sizes must be same if the mappings are copied over */
4489       (*M)->rmap->bs = mat->rmap->bs;
4490       (*M)->cmap->bs = mat->cmap->bs;
4491       PetscCall(PetscObjectReference((PetscObject)mat->rmap->mapping));
4492       PetscCall(PetscObjectReference((PetscObject)mat->cmap->mapping));
4493       (*M)->rmap->mapping = mat->rmap->mapping;
4494       (*M)->cmap->mapping = mat->cmap->mapping;
4495     }
4496     (*M)->stencil.dim = mat->stencil.dim;
4497     (*M)->stencil.noc = mat->stencil.noc;
4498     for (i = 0; i <= mat->stencil.dim + (mat->stencil.noc ? 0 : -1); i++) {
4499       (*M)->stencil.dims[i]   = mat->stencil.dims[i];
4500       (*M)->stencil.starts[i] = mat->stencil.starts[i];
4501     }
4502     PetscCall(PetscLogEventEnd(MAT_Convert, mat, 0, 0, 0));
4503   }
4504   PetscCall(PetscObjectStateIncrease((PetscObject)*M));
4505 
4506   /* Copy Mat options */
4507   if (issymmetric == PETSC_BOOL3_TRUE) PetscCall(MatSetOption(*M, MAT_SYMMETRIC, PETSC_TRUE));
4508   else if (issymmetric == PETSC_BOOL3_FALSE) PetscCall(MatSetOption(*M, MAT_SYMMETRIC, PETSC_FALSE));
4509   if (ishermitian == PETSC_BOOL3_TRUE) PetscCall(MatSetOption(*M, MAT_HERMITIAN, PETSC_TRUE));
4510   else if (ishermitian == PETSC_BOOL3_FALSE) PetscCall(MatSetOption(*M, MAT_HERMITIAN, PETSC_FALSE));
4511   PetscFunctionReturn(PETSC_SUCCESS);
4512 }
4513 
4514 /*@
4515   MatFactorGetSolverType - Returns name of the package providing the factorization routines
4516 
4517   Not Collective
4518 
4519   Input Parameter:
4520 . mat - the matrix, must be a factored matrix
4521 
4522   Output Parameter:
4523 . type - the string name of the package (do not free this string)
4524 
4525   Level: intermediate
4526 
4527   Fortran Note:
4528   Pass in an empty string that is long enough and the package name will be copied into it.
4529 
4530 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatGetFactor()`, `MatSolverType`, `MatCopy()`, `MatDuplicate()`, `MatGetFactorAvailable()`
4531 @*/
4532 PetscErrorCode MatFactorGetSolverType(Mat mat, MatSolverType *type)
4533 {
4534   PetscErrorCode (*conv)(Mat, MatSolverType *);
4535 
4536   PetscFunctionBegin;
4537   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
4538   PetscValidType(mat, 1);
4539   PetscAssertPointer(type, 2);
4540   PetscCheck(mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Only for factored matrix");
4541   PetscCall(PetscObjectQueryFunction((PetscObject)mat, "MatFactorGetSolverType_C", &conv));
4542   if (conv) PetscCall((*conv)(mat, type));
4543   else *type = MATSOLVERPETSC;
4544   PetscFunctionReturn(PETSC_SUCCESS);
4545 }
4546 
4547 typedef struct _MatSolverTypeForSpecifcType *MatSolverTypeForSpecifcType;
4548 struct _MatSolverTypeForSpecifcType {
4549   MatType mtype;
4550   /* no entry for MAT_FACTOR_NONE */
4551   PetscErrorCode (*createfactor[MAT_FACTOR_NUM_TYPES - 1])(Mat, MatFactorType, Mat *);
4552   MatSolverTypeForSpecifcType next;
4553 };
4554 
4555 typedef struct _MatSolverTypeHolder *MatSolverTypeHolder;
4556 struct _MatSolverTypeHolder {
4557   char                       *name;
4558   MatSolverTypeForSpecifcType handlers;
4559   MatSolverTypeHolder         next;
4560 };
4561 
4562 static MatSolverTypeHolder MatSolverTypeHolders = NULL;
4563 
4564 /*@C
4565   MatSolverTypeRegister - Registers a `MatSolverType` that works for a particular matrix type
4566 
4567   Logically Collective, No Fortran Support
4568 
4569   Input Parameters:
4570 + package      - name of the package, for example petsc or superlu
4571 . mtype        - the matrix type that works with this package
4572 . ftype        - the type of factorization supported by the package
4573 - createfactor - routine that will create the factored matrix ready to be used
4574 
4575   Level: developer
4576 
4577 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatFactorGetSolverType()`, `MatCopy()`, `MatDuplicate()`, `MatGetFactorAvailable()`,
4578   `MatGetFactor()`
4579 @*/
4580 PetscErrorCode MatSolverTypeRegister(MatSolverType package, MatType mtype, MatFactorType ftype, PetscErrorCode (*createfactor)(Mat, MatFactorType, Mat *))
4581 {
4582   MatSolverTypeHolder         next = MatSolverTypeHolders, prev = NULL;
4583   PetscBool                   flg;
4584   MatSolverTypeForSpecifcType inext, iprev = NULL;
4585 
4586   PetscFunctionBegin;
4587   PetscCall(MatInitializePackage());
4588   if (!next) {
4589     PetscCall(PetscNew(&MatSolverTypeHolders));
4590     PetscCall(PetscStrallocpy(package, &MatSolverTypeHolders->name));
4591     PetscCall(PetscNew(&MatSolverTypeHolders->handlers));
4592     PetscCall(PetscStrallocpy(mtype, (char **)&MatSolverTypeHolders->handlers->mtype));
4593     MatSolverTypeHolders->handlers->createfactor[(int)ftype - 1] = createfactor;
4594     PetscFunctionReturn(PETSC_SUCCESS);
4595   }
4596   while (next) {
4597     PetscCall(PetscStrcasecmp(package, next->name, &flg));
4598     if (flg) {
4599       PetscCheck(next->handlers, PETSC_COMM_SELF, PETSC_ERR_PLIB, "MatSolverTypeHolder is missing handlers");
4600       inext = next->handlers;
4601       while (inext) {
4602         PetscCall(PetscStrcasecmp(mtype, inext->mtype, &flg));
4603         if (flg) {
4604           inext->createfactor[(int)ftype - 1] = createfactor;
4605           PetscFunctionReturn(PETSC_SUCCESS);
4606         }
4607         iprev = inext;
4608         inext = inext->next;
4609       }
4610       PetscCall(PetscNew(&iprev->next));
4611       PetscCall(PetscStrallocpy(mtype, (char **)&iprev->next->mtype));
4612       iprev->next->createfactor[(int)ftype - 1] = createfactor;
4613       PetscFunctionReturn(PETSC_SUCCESS);
4614     }
4615     prev = next;
4616     next = next->next;
4617   }
4618   PetscCall(PetscNew(&prev->next));
4619   PetscCall(PetscStrallocpy(package, &prev->next->name));
4620   PetscCall(PetscNew(&prev->next->handlers));
4621   PetscCall(PetscStrallocpy(mtype, (char **)&prev->next->handlers->mtype));
4622   prev->next->handlers->createfactor[(int)ftype - 1] = createfactor;
4623   PetscFunctionReturn(PETSC_SUCCESS);
4624 }
4625 
4626 /*@C
4627   MatSolverTypeGet - Gets the function that creates the factor matrix if it exist
4628 
4629   Input Parameters:
4630 + type  - name of the package, for example petsc or superlu, if this is 'NULL', then the first result that satisfies the other criteria is returned
4631 . ftype - the type of factorization supported by the type
4632 - mtype - the matrix type that works with this type
4633 
4634   Output Parameters:
4635 + foundtype    - `PETSC_TRUE` if the type was registered
4636 . foundmtype   - `PETSC_TRUE` if the type supports the requested mtype
4637 - createfactor - routine that will create the factored matrix ready to be used or `NULL` if not found
4638 
4639   Calling sequence of `createfactor`:
4640 + A     - the matrix providing the factor matrix
4641 . ftype - the `MatFactorType` of the factor requested
4642 - B     - the new factor matrix that responds to MatXXFactorSymbolic,Numeric() functions, such as `MatLUFactorSymbolic()`
4643 
4644   Level: developer
4645 
4646   Note:
4647   When `type` is `NULL` the available functions are searched for based on the order of the calls to `MatSolverTypeRegister()` in `MatInitializePackage()`.
4648   Since different PETSc configurations may have different external solvers, seemingly identical runs with different PETSc configurations may use a different solver.
4649   For example if one configuration had `--download-mumps` while a different one had `--download-superlu_dist`.
4650 
4651 .seealso: [](ch_matrices), `Mat`, `MatFactorType`, `MatType`, `MatCopy()`, `MatDuplicate()`, `MatGetFactorAvailable()`, `MatSolverTypeRegister()`, `MatGetFactor()`,
4652           `MatInitializePackage()`
4653 @*/
4654 PetscErrorCode MatSolverTypeGet(MatSolverType type, MatType mtype, MatFactorType ftype, PetscBool *foundtype, PetscBool *foundmtype, PetscErrorCode (**createfactor)(Mat A, MatFactorType ftype, Mat *B))
4655 {
4656   MatSolverTypeHolder         next = MatSolverTypeHolders;
4657   PetscBool                   flg;
4658   MatSolverTypeForSpecifcType inext;
4659 
4660   PetscFunctionBegin;
4661   if (foundtype) *foundtype = PETSC_FALSE;
4662   if (foundmtype) *foundmtype = PETSC_FALSE;
4663   if (createfactor) *createfactor = NULL;
4664 
4665   if (type) {
4666     while (next) {
4667       PetscCall(PetscStrcasecmp(type, next->name, &flg));
4668       if (flg) {
4669         if (foundtype) *foundtype = PETSC_TRUE;
4670         inext = next->handlers;
4671         while (inext) {
4672           PetscCall(PetscStrbeginswith(mtype, inext->mtype, &flg));
4673           if (flg) {
4674             if (foundmtype) *foundmtype = PETSC_TRUE;
4675             if (createfactor) *createfactor = inext->createfactor[(int)ftype - 1];
4676             PetscFunctionReturn(PETSC_SUCCESS);
4677           }
4678           inext = inext->next;
4679         }
4680       }
4681       next = next->next;
4682     }
4683   } else {
4684     while (next) {
4685       inext = next->handlers;
4686       while (inext) {
4687         PetscCall(PetscStrcmp(mtype, inext->mtype, &flg));
4688         if (flg && inext->createfactor[(int)ftype - 1]) {
4689           if (foundtype) *foundtype = PETSC_TRUE;
4690           if (foundmtype) *foundmtype = PETSC_TRUE;
4691           if (createfactor) *createfactor = inext->createfactor[(int)ftype - 1];
4692           PetscFunctionReturn(PETSC_SUCCESS);
4693         }
4694         inext = inext->next;
4695       }
4696       next = next->next;
4697     }
4698     /* try with base classes inext->mtype */
4699     next = MatSolverTypeHolders;
4700     while (next) {
4701       inext = next->handlers;
4702       while (inext) {
4703         PetscCall(PetscStrbeginswith(mtype, inext->mtype, &flg));
4704         if (flg && inext->createfactor[(int)ftype - 1]) {
4705           if (foundtype) *foundtype = PETSC_TRUE;
4706           if (foundmtype) *foundmtype = PETSC_TRUE;
4707           if (createfactor) *createfactor = inext->createfactor[(int)ftype - 1];
4708           PetscFunctionReturn(PETSC_SUCCESS);
4709         }
4710         inext = inext->next;
4711       }
4712       next = next->next;
4713     }
4714   }
4715   PetscFunctionReturn(PETSC_SUCCESS);
4716 }
4717 
4718 PetscErrorCode MatSolverTypeDestroy(void)
4719 {
4720   MatSolverTypeHolder         next = MatSolverTypeHolders, prev;
4721   MatSolverTypeForSpecifcType inext, iprev;
4722 
4723   PetscFunctionBegin;
4724   while (next) {
4725     PetscCall(PetscFree(next->name));
4726     inext = next->handlers;
4727     while (inext) {
4728       PetscCall(PetscFree(inext->mtype));
4729       iprev = inext;
4730       inext = inext->next;
4731       PetscCall(PetscFree(iprev));
4732     }
4733     prev = next;
4734     next = next->next;
4735     PetscCall(PetscFree(prev));
4736   }
4737   MatSolverTypeHolders = NULL;
4738   PetscFunctionReturn(PETSC_SUCCESS);
4739 }
4740 
4741 /*@
4742   MatFactorGetCanUseOrdering - Indicates if the factorization can use the ordering provided in `MatLUFactorSymbolic()`, `MatCholeskyFactorSymbolic()`
4743 
4744   Logically Collective
4745 
4746   Input Parameter:
4747 . mat - the matrix
4748 
4749   Output Parameter:
4750 . flg - `PETSC_TRUE` if uses the ordering
4751 
4752   Level: developer
4753 
4754   Note:
4755   Most internal PETSc factorizations use the ordering passed to the factorization routine but external
4756   packages do not, thus we want to skip generating the ordering when it is not needed or used.
4757 
4758 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatCopy()`, `MatDuplicate()`, `MatGetFactorAvailable()`, `MatGetFactor()`, `MatLUFactorSymbolic()`, `MatCholeskyFactorSymbolic()`
4759 @*/
4760 PetscErrorCode MatFactorGetCanUseOrdering(Mat mat, PetscBool *flg)
4761 {
4762   PetscFunctionBegin;
4763   *flg = mat->canuseordering;
4764   PetscFunctionReturn(PETSC_SUCCESS);
4765 }
4766 
4767 /*@
4768   MatFactorGetPreferredOrdering - The preferred ordering for a particular matrix factor object
4769 
4770   Logically Collective
4771 
4772   Input Parameters:
4773 + mat   - the matrix obtained with `MatGetFactor()`
4774 - ftype - the factorization type to be used
4775 
4776   Output Parameter:
4777 . otype - the preferred ordering type
4778 
4779   Level: developer
4780 
4781 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatFactorType`, `MatOrderingType`, `MatCopy()`, `MatDuplicate()`, `MatGetFactorAvailable()`, `MatGetFactor()`, `MatLUFactorSymbolic()`, `MatCholeskyFactorSymbolic()`
4782 @*/
4783 PetscErrorCode MatFactorGetPreferredOrdering(Mat mat, MatFactorType ftype, MatOrderingType *otype)
4784 {
4785   PetscFunctionBegin;
4786   *otype = mat->preferredordering[ftype];
4787   PetscCheck(*otype, PETSC_COMM_SELF, PETSC_ERR_PLIB, "MatFactor did not have a preferred ordering");
4788   PetscFunctionReturn(PETSC_SUCCESS);
4789 }
4790 
4791 /*@
4792   MatGetFactor - Returns a matrix suitable to calls to MatXXFactorSymbolic,Numeric()
4793 
4794   Collective
4795 
4796   Input Parameters:
4797 + mat   - the matrix
4798 . type  - name of solver type, for example, superlu, petsc (to use PETSc's solver if it is available), if this is 'NULL', then the first result that satisfies
4799           the other criteria is returned
4800 - ftype - factor type, `MAT_FACTOR_LU`, `MAT_FACTOR_CHOLESKY`, `MAT_FACTOR_ICC`, `MAT_FACTOR_ILU`, `MAT_FACTOR_QR`
4801 
4802   Output Parameter:
4803 . f - the factor matrix used with MatXXFactorSymbolic,Numeric() calls. Can be `NULL` in some cases, see notes below.
4804 
4805   Options Database Keys:
4806 + -pc_factor_mat_solver_type <type>             - choose the type at run time. When using `KSP` solvers
4807 - -mat_factor_bind_factorization <host, device> - Where to do matrix factorization? Default is device (might consume more device memory.
4808                                                   One can choose host to save device memory). Currently only supported with `MATSEQAIJCUSPARSE` matrices.
4809 
4810   Level: intermediate
4811 
4812   Notes:
4813   The return matrix can be `NULL` if the requested factorization is not available, since some combinations of matrix types and factorization
4814   types registered with `MatSolverTypeRegister()` cannot be fully tested if not at runtime.
4815 
4816   Users usually access the factorization solvers via `KSP`
4817 
4818   Some PETSc matrix formats have alternative solvers available that are contained in alternative packages
4819   such as pastix, superlu, mumps etc. PETSc must have been ./configure to use the external solver, using the option --download-package or --with-package-dir
4820 
4821   When `type` is `NULL` the available results are searched for based on the order of the calls to `MatSolverTypeRegister()` in `MatInitializePackage()`.
4822   Since different PETSc configurations may have different external solvers, seemingly identical runs with different PETSc configurations may use a different solver.
4823   For example if one configuration had --download-mumps while a different one had --download-superlu_dist.
4824 
4825   Some of the packages have options for controlling the factorization, these are in the form -prefix_mat_packagename_packageoption
4826   where prefix is normally obtained from the calling `KSP`/`PC`. If `MatGetFactor()` is called directly one can set
4827   call `MatSetOptionsPrefixFactor()` on the originating matrix or  `MatSetOptionsPrefix()` on the resulting factor matrix.
4828 
4829   Developer Note:
4830   This should actually be called `MatCreateFactor()` since it creates a new factor object
4831 
4832 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `KSP`, `MatSolverType`, `MatFactorType`, `MatCopy()`, `MatDuplicate()`,
4833           `MatGetFactorAvailable()`, `MatFactorGetCanUseOrdering()`, `MatSolverTypeRegister()`, `MatSolverTypeGet()`
4834           `MAT_FACTOR_LU`, `MAT_FACTOR_CHOLESKY`, `MAT_FACTOR_ICC`, `MAT_FACTOR_ILU`, `MAT_FACTOR_QR`, `MatInitializePackage()`
4835 @*/
4836 PetscErrorCode MatGetFactor(Mat mat, MatSolverType type, MatFactorType ftype, Mat *f)
4837 {
4838   PetscBool foundtype, foundmtype, shell, hasop = PETSC_FALSE;
4839   PetscErrorCode (*conv)(Mat, MatFactorType, Mat *);
4840 
4841   PetscFunctionBegin;
4842   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
4843   PetscValidType(mat, 1);
4844 
4845   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
4846   MatCheckPreallocated(mat, 1);
4847 
4848   PetscCall(MatIsShell(mat, &shell));
4849   if (shell) PetscCall(MatHasOperation(mat, MATOP_GET_FACTOR, &hasop));
4850   if (hasop) {
4851     PetscUseTypeMethod(mat, getfactor, type, ftype, f);
4852     PetscFunctionReturn(PETSC_SUCCESS);
4853   }
4854 
4855   PetscCall(MatSolverTypeGet(type, ((PetscObject)mat)->type_name, ftype, &foundtype, &foundmtype, &conv));
4856   if (!foundtype) {
4857     if (type) {
4858       SETERRQ(PetscObjectComm((PetscObject)mat), PETSC_ERR_MISSING_FACTOR, "Could not locate solver type %s for factorization type %s and matrix type %s. Perhaps you must ./configure with --download-%s", type, MatFactorTypes[ftype],
4859               ((PetscObject)mat)->type_name, type);
4860     } else {
4861       SETERRQ(PetscObjectComm((PetscObject)mat), PETSC_ERR_MISSING_FACTOR, "Could not locate a solver type for factorization type %s and matrix type %s.", MatFactorTypes[ftype], ((PetscObject)mat)->type_name);
4862     }
4863   }
4864   PetscCheck(foundmtype, PetscObjectComm((PetscObject)mat), PETSC_ERR_MISSING_FACTOR, "MatSolverType %s does not support matrix type %s", type, ((PetscObject)mat)->type_name);
4865   PetscCheck(conv, PetscObjectComm((PetscObject)mat), PETSC_ERR_MISSING_FACTOR, "MatSolverType %s does not support factorization type %s for matrix type %s", type, MatFactorTypes[ftype], ((PetscObject)mat)->type_name);
4866 
4867   PetscCall((*conv)(mat, ftype, f));
4868   if (mat->factorprefix) PetscCall(MatSetOptionsPrefix(*f, mat->factorprefix));
4869   PetscFunctionReturn(PETSC_SUCCESS);
4870 }
4871 
4872 /*@
4873   MatGetFactorAvailable - Returns a flag if matrix supports particular type and factor type
4874 
4875   Not Collective
4876 
4877   Input Parameters:
4878 + mat   - the matrix
4879 . type  - name of solver type, for example, superlu, petsc (to use PETSc's default)
4880 - ftype - factor type, `MAT_FACTOR_LU`, `MAT_FACTOR_CHOLESKY`, `MAT_FACTOR_ICC`, `MAT_FACTOR_ILU`, `MAT_FACTOR_QR`
4881 
4882   Output Parameter:
4883 . flg - PETSC_TRUE if the factorization is available
4884 
4885   Level: intermediate
4886 
4887   Notes:
4888   Some PETSc matrix formats have alternative solvers available that are contained in alternative packages
4889   such as pastix, superlu, mumps etc.
4890 
4891   PETSc must have been ./configure to use the external solver, using the option --download-package
4892 
4893   Developer Note:
4894   This should actually be called `MatCreateFactorAvailable()` since `MatGetFactor()` creates a new factor object
4895 
4896 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatSolverType`, `MatFactorType`, `MatGetFactor()`, `MatCopy()`, `MatDuplicate()`, `MatSolverTypeRegister()`,
4897           `MAT_FACTOR_LU`, `MAT_FACTOR_CHOLESKY`, `MAT_FACTOR_ICC`, `MAT_FACTOR_ILU`, `MAT_FACTOR_QR`, `MatSolverTypeGet()`
4898 @*/
4899 PetscErrorCode MatGetFactorAvailable(Mat mat, MatSolverType type, MatFactorType ftype, PetscBool *flg)
4900 {
4901   PetscErrorCode (*gconv)(Mat, MatFactorType, Mat *);
4902 
4903   PetscFunctionBegin;
4904   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
4905   PetscAssertPointer(flg, 4);
4906 
4907   *flg = PETSC_FALSE;
4908   if (!((PetscObject)mat)->type_name) PetscFunctionReturn(PETSC_SUCCESS);
4909 
4910   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
4911   MatCheckPreallocated(mat, 1);
4912 
4913   PetscCall(MatSolverTypeGet(type, ((PetscObject)mat)->type_name, ftype, NULL, NULL, &gconv));
4914   *flg = gconv ? PETSC_TRUE : PETSC_FALSE;
4915   PetscFunctionReturn(PETSC_SUCCESS);
4916 }
4917 
4918 /*@
4919   MatDuplicate - Duplicates a matrix including the non-zero structure.
4920 
4921   Collective
4922 
4923   Input Parameters:
4924 + mat - the matrix
4925 - op  - One of `MAT_DO_NOT_COPY_VALUES`, `MAT_COPY_VALUES`, or `MAT_SHARE_NONZERO_PATTERN`.
4926         See the manual page for `MatDuplicateOption()` for an explanation of these options.
4927 
4928   Output Parameter:
4929 . M - pointer to place new matrix
4930 
4931   Level: intermediate
4932 
4933   Notes:
4934   You cannot change the nonzero pattern for the parent or child matrix later if you use `MAT_SHARE_NONZERO_PATTERN`.
4935 
4936   If `op` is not `MAT_COPY_VALUES` the numerical values in the new matrix are zeroed.
4937 
4938   May be called with an unassembled input `Mat` if `MAT_DO_NOT_COPY_VALUES` is used, in which case the output `Mat` is unassembled as well.
4939 
4940   When original mat is a product of matrix operation, e.g., an output of `MatMatMult()` or `MatCreateSubMatrix()`, only the matrix data structure of `mat`
4941   is duplicated and the internal data structures created for the reuse of previous matrix operations are not duplicated.
4942   User should not use `MatDuplicate()` to create new matrix `M` if `M` is intended to be reused as the product of matrix operation.
4943 
4944 .seealso: [](ch_matrices), `Mat`, `MatCopy()`, `MatConvert()`, `MatDuplicateOption`
4945 @*/
4946 PetscErrorCode MatDuplicate(Mat mat, MatDuplicateOption op, Mat *M)
4947 {
4948   Mat         B;
4949   VecType     vtype;
4950   PetscInt    i;
4951   PetscObject dm, container_h, container_d;
4952   void (*viewf)(void);
4953 
4954   PetscFunctionBegin;
4955   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
4956   PetscValidType(mat, 1);
4957   PetscAssertPointer(M, 3);
4958   PetscCheck(op != MAT_COPY_VALUES || mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "MAT_COPY_VALUES not allowed for unassembled matrix");
4959   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
4960   MatCheckPreallocated(mat, 1);
4961 
4962   *M = NULL;
4963   PetscCall(PetscLogEventBegin(MAT_Convert, mat, 0, 0, 0));
4964   PetscUseTypeMethod(mat, duplicate, op, M);
4965   PetscCall(PetscLogEventEnd(MAT_Convert, mat, 0, 0, 0));
4966   B = *M;
4967 
4968   PetscCall(MatGetOperation(mat, MATOP_VIEW, &viewf));
4969   if (viewf) PetscCall(MatSetOperation(B, MATOP_VIEW, viewf));
4970   PetscCall(MatGetVecType(mat, &vtype));
4971   PetscCall(MatSetVecType(B, vtype));
4972 
4973   B->stencil.dim = mat->stencil.dim;
4974   B->stencil.noc = mat->stencil.noc;
4975   for (i = 0; i <= mat->stencil.dim + (mat->stencil.noc ? 0 : -1); i++) {
4976     B->stencil.dims[i]   = mat->stencil.dims[i];
4977     B->stencil.starts[i] = mat->stencil.starts[i];
4978   }
4979 
4980   B->nooffproczerorows = mat->nooffproczerorows;
4981   B->nooffprocentries  = mat->nooffprocentries;
4982 
4983   PetscCall(PetscObjectQuery((PetscObject)mat, "__PETSc_dm", &dm));
4984   if (dm) PetscCall(PetscObjectCompose((PetscObject)B, "__PETSc_dm", dm));
4985   PetscCall(PetscObjectQuery((PetscObject)mat, "__PETSc_MatCOOStruct_Host", &container_h));
4986   if (container_h) PetscCall(PetscObjectCompose((PetscObject)B, "__PETSc_MatCOOStruct_Host", container_h));
4987   PetscCall(PetscObjectQuery((PetscObject)mat, "__PETSc_MatCOOStruct_Device", &container_d));
4988   if (container_d) PetscCall(PetscObjectCompose((PetscObject)B, "__PETSc_MatCOOStruct_Device", container_d));
4989   if (op == MAT_COPY_VALUES) PetscCall(MatPropagateSymmetryOptions(mat, B));
4990   PetscCall(PetscObjectStateIncrease((PetscObject)B));
4991   PetscFunctionReturn(PETSC_SUCCESS);
4992 }
4993 
4994 /*@
4995   MatGetDiagonal - Gets the diagonal of a matrix as a `Vec`
4996 
4997   Logically Collective
4998 
4999   Input Parameter:
5000 . mat - the matrix
5001 
5002   Output Parameter:
5003 . v - the diagonal of the matrix
5004 
5005   Level: intermediate
5006 
5007   Note:
5008   If `mat` has local sizes `n` x `m`, this routine fills the first `ndiag = min(n, m)` entries
5009   of `v` with the diagonal values. Thus `v` must have local size of at least `ndiag`. If `v`
5010   is larger than `ndiag`, the values of the remaining entries are unspecified.
5011 
5012   Currently only correct in parallel for square matrices.
5013 
5014 .seealso: [](ch_matrices), `Mat`, `Vec`, `MatGetRow()`, `MatCreateSubMatrices()`, `MatCreateSubMatrix()`, `MatGetRowMaxAbs()`
5015 @*/
5016 PetscErrorCode MatGetDiagonal(Mat mat, Vec v)
5017 {
5018   PetscFunctionBegin;
5019   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
5020   PetscValidType(mat, 1);
5021   PetscValidHeaderSpecific(v, VEC_CLASSID, 2);
5022   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
5023   MatCheckPreallocated(mat, 1);
5024   if (PetscDefined(USE_DEBUG)) {
5025     PetscInt nv, row, col, ndiag;
5026 
5027     PetscCall(VecGetLocalSize(v, &nv));
5028     PetscCall(MatGetLocalSize(mat, &row, &col));
5029     ndiag = PetscMin(row, col);
5030     PetscCheck(nv >= ndiag, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Nonconforming Mat and Vec. Vec local size %" PetscInt_FMT " < Mat local diagonal length %" PetscInt_FMT, nv, ndiag);
5031   }
5032 
5033   PetscUseTypeMethod(mat, getdiagonal, v);
5034   PetscCall(PetscObjectStateIncrease((PetscObject)v));
5035   PetscFunctionReturn(PETSC_SUCCESS);
5036 }
5037 
5038 /*@
5039   MatGetRowMin - Gets the minimum value (of the real part) of each
5040   row of the matrix
5041 
5042   Logically Collective
5043 
5044   Input Parameter:
5045 . mat - the matrix
5046 
5047   Output Parameters:
5048 + v   - the vector for storing the maximums
5049 - idx - the indices of the column found for each row (optional, pass `NULL` if not needed)
5050 
5051   Level: intermediate
5052 
5053   Note:
5054   The result of this call are the same as if one converted the matrix to dense format
5055   and found the minimum value in each row (i.e. the implicit zeros are counted as zeros).
5056 
5057   This code is only implemented for a couple of matrix formats.
5058 
5059 .seealso: [](ch_matrices), `Mat`, `MatGetDiagonal()`, `MatCreateSubMatrices()`, `MatCreateSubMatrix()`, `MatGetRowMaxAbs()`, `MatGetRowMinAbs()`,
5060           `MatGetRowMax()`
5061 @*/
5062 PetscErrorCode MatGetRowMin(Mat mat, Vec v, PetscInt idx[])
5063 {
5064   PetscFunctionBegin;
5065   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
5066   PetscValidType(mat, 1);
5067   PetscValidHeaderSpecific(v, VEC_CLASSID, 2);
5068   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
5069 
5070   if (!mat->cmap->N) {
5071     PetscCall(VecSet(v, PETSC_MAX_REAL));
5072     if (idx) {
5073       PetscInt i, m = mat->rmap->n;
5074       for (i = 0; i < m; i++) idx[i] = -1;
5075     }
5076   } else {
5077     MatCheckPreallocated(mat, 1);
5078   }
5079   PetscUseTypeMethod(mat, getrowmin, v, idx);
5080   PetscCall(PetscObjectStateIncrease((PetscObject)v));
5081   PetscFunctionReturn(PETSC_SUCCESS);
5082 }
5083 
5084 /*@
5085   MatGetRowMinAbs - Gets the minimum value (in absolute value) of each
5086   row of the matrix
5087 
5088   Logically Collective
5089 
5090   Input Parameter:
5091 . mat - the matrix
5092 
5093   Output Parameters:
5094 + v   - the vector for storing the minimums
5095 - idx - the indices of the column found for each row (or `NULL` if not needed)
5096 
5097   Level: intermediate
5098 
5099   Notes:
5100   if a row is completely empty or has only 0.0 values, then the `idx` value for that
5101   row is 0 (the first column).
5102 
5103   This code is only implemented for a couple of matrix formats.
5104 
5105 .seealso: [](ch_matrices), `Mat`, `MatGetDiagonal()`, `MatCreateSubMatrices()`, `MatCreateSubMatrix()`, `MatGetRowMax()`, `MatGetRowMaxAbs()`, `MatGetRowMin()`
5106 @*/
5107 PetscErrorCode MatGetRowMinAbs(Mat mat, Vec v, PetscInt idx[])
5108 {
5109   PetscFunctionBegin;
5110   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
5111   PetscValidType(mat, 1);
5112   PetscValidHeaderSpecific(v, VEC_CLASSID, 2);
5113   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
5114   PetscCheck(!mat->factortype, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
5115 
5116   if (!mat->cmap->N) {
5117     PetscCall(VecSet(v, 0.0));
5118     if (idx) {
5119       PetscInt i, m = mat->rmap->n;
5120       for (i = 0; i < m; i++) idx[i] = -1;
5121     }
5122   } else {
5123     MatCheckPreallocated(mat, 1);
5124     if (idx) PetscCall(PetscArrayzero(idx, mat->rmap->n));
5125     PetscUseTypeMethod(mat, getrowminabs, v, idx);
5126   }
5127   PetscCall(PetscObjectStateIncrease((PetscObject)v));
5128   PetscFunctionReturn(PETSC_SUCCESS);
5129 }
5130 
5131 /*@
5132   MatGetRowMax - Gets the maximum value (of the real part) of each
5133   row of the matrix
5134 
5135   Logically Collective
5136 
5137   Input Parameter:
5138 . mat - the matrix
5139 
5140   Output Parameters:
5141 + v   - the vector for storing the maximums
5142 - idx - the indices of the column found for each row (optional, otherwise pass `NULL`)
5143 
5144   Level: intermediate
5145 
5146   Notes:
5147   The result of this call are the same as if one converted the matrix to dense format
5148   and found the minimum value in each row (i.e. the implicit zeros are counted as zeros).
5149 
5150   This code is only implemented for a couple of matrix formats.
5151 
5152 .seealso: [](ch_matrices), `Mat`, `MatGetDiagonal()`, `MatCreateSubMatrices()`, `MatCreateSubMatrix()`, `MatGetRowMaxAbs()`, `MatGetRowMin()`, `MatGetRowMinAbs()`
5153 @*/
5154 PetscErrorCode MatGetRowMax(Mat mat, Vec v, PetscInt idx[])
5155 {
5156   PetscFunctionBegin;
5157   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
5158   PetscValidType(mat, 1);
5159   PetscValidHeaderSpecific(v, VEC_CLASSID, 2);
5160   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
5161 
5162   if (!mat->cmap->N) {
5163     PetscCall(VecSet(v, PETSC_MIN_REAL));
5164     if (idx) {
5165       PetscInt i, m = mat->rmap->n;
5166       for (i = 0; i < m; i++) idx[i] = -1;
5167     }
5168   } else {
5169     MatCheckPreallocated(mat, 1);
5170     PetscUseTypeMethod(mat, getrowmax, v, idx);
5171   }
5172   PetscCall(PetscObjectStateIncrease((PetscObject)v));
5173   PetscFunctionReturn(PETSC_SUCCESS);
5174 }
5175 
5176 /*@
5177   MatGetRowMaxAbs - Gets the maximum value (in absolute value) of each
5178   row of the matrix
5179 
5180   Logically Collective
5181 
5182   Input Parameter:
5183 . mat - the matrix
5184 
5185   Output Parameters:
5186 + v   - the vector for storing the maximums
5187 - idx - the indices of the column found for each row (or `NULL` if not needed)
5188 
5189   Level: intermediate
5190 
5191   Notes:
5192   if a row is completely empty or has only 0.0 values, then the `idx` value for that
5193   row is 0 (the first column).
5194 
5195   This code is only implemented for a couple of matrix formats.
5196 
5197 .seealso: [](ch_matrices), `Mat`, `MatGetDiagonal()`, `MatCreateSubMatrices()`, `MatCreateSubMatrix()`, `MatGetRowSum()`, `MatGetRowMin()`, `MatGetRowMinAbs()`
5198 @*/
5199 PetscErrorCode MatGetRowMaxAbs(Mat mat, Vec v, PetscInt idx[])
5200 {
5201   PetscFunctionBegin;
5202   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
5203   PetscValidType(mat, 1);
5204   PetscValidHeaderSpecific(v, VEC_CLASSID, 2);
5205   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
5206 
5207   if (!mat->cmap->N) {
5208     PetscCall(VecSet(v, 0.0));
5209     if (idx) {
5210       PetscInt i, m = mat->rmap->n;
5211       for (i = 0; i < m; i++) idx[i] = -1;
5212     }
5213   } else {
5214     MatCheckPreallocated(mat, 1);
5215     if (idx) PetscCall(PetscArrayzero(idx, mat->rmap->n));
5216     PetscUseTypeMethod(mat, getrowmaxabs, v, idx);
5217   }
5218   PetscCall(PetscObjectStateIncrease((PetscObject)v));
5219   PetscFunctionReturn(PETSC_SUCCESS);
5220 }
5221 
5222 /*@
5223   MatGetRowSumAbs - Gets the sum value (in absolute value) of each row of the matrix
5224 
5225   Logically Collective
5226 
5227   Input Parameter:
5228 . mat - the matrix
5229 
5230   Output Parameter:
5231 . v - the vector for storing the sum
5232 
5233   Level: intermediate
5234 
5235   This code is only implemented for a couple of matrix formats.
5236 
5237 .seealso: [](ch_matrices), `Mat`, `MatGetDiagonal()`, `MatCreateSubMatrices()`, `MatCreateSubMatrix()`, `MatGetRowMax()`, `MatGetRowMin()`, `MatGetRowMinAbs()`
5238 @*/
5239 PetscErrorCode MatGetRowSumAbs(Mat mat, Vec v)
5240 {
5241   PetscFunctionBegin;
5242   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
5243   PetscValidType(mat, 1);
5244   PetscValidHeaderSpecific(v, VEC_CLASSID, 2);
5245   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
5246 
5247   if (!mat->cmap->N) {
5248     PetscCall(VecSet(v, 0.0));
5249   } else {
5250     MatCheckPreallocated(mat, 1);
5251     PetscUseTypeMethod(mat, getrowsumabs, v);
5252   }
5253   PetscCall(PetscObjectStateIncrease((PetscObject)v));
5254   PetscFunctionReturn(PETSC_SUCCESS);
5255 }
5256 
5257 /*@
5258   MatGetRowSum - Gets the sum of each row of the matrix
5259 
5260   Logically or Neighborhood Collective
5261 
5262   Input Parameter:
5263 . mat - the matrix
5264 
5265   Output Parameter:
5266 . v - the vector for storing the sum of rows
5267 
5268   Level: intermediate
5269 
5270   Note:
5271   This code is slow since it is not currently specialized for different formats
5272 
5273 .seealso: [](ch_matrices), `Mat`, `MatGetDiagonal()`, `MatCreateSubMatrices()`, `MatCreateSubMatrix()`, `MatGetRowMax()`, `MatGetRowMin()`, `MatGetRowMaxAbs()`, `MatGetRowMinAbs()`, `MatGetRowSumAbs()`
5274 @*/
5275 PetscErrorCode MatGetRowSum(Mat mat, Vec v)
5276 {
5277   Vec ones;
5278 
5279   PetscFunctionBegin;
5280   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
5281   PetscValidType(mat, 1);
5282   PetscValidHeaderSpecific(v, VEC_CLASSID, 2);
5283   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
5284   MatCheckPreallocated(mat, 1);
5285   PetscCall(MatCreateVecs(mat, &ones, NULL));
5286   PetscCall(VecSet(ones, 1.));
5287   PetscCall(MatMult(mat, ones, v));
5288   PetscCall(VecDestroy(&ones));
5289   PetscFunctionReturn(PETSC_SUCCESS);
5290 }
5291 
5292 /*@
5293   MatTransposeSetPrecursor - Set the matrix from which the second matrix will receive numerical transpose data with a call to `MatTranspose`(A,`MAT_REUSE_MATRIX`,&B)
5294   when B was not obtained with `MatTranspose`(A,`MAT_INITIAL_MATRIX`,&B)
5295 
5296   Collective
5297 
5298   Input Parameter:
5299 . mat - the matrix to provide the transpose
5300 
5301   Output Parameter:
5302 . B - the matrix to contain the transpose; it MUST have the nonzero structure of the transpose of A or the code will crash or generate incorrect results
5303 
5304   Level: advanced
5305 
5306   Note:
5307   Normally the use of `MatTranspose`(A, `MAT_REUSE_MATRIX`, &B) requires that `B` was obtained with a call to `MatTranspose`(A, `MAT_INITIAL_MATRIX`, &B). This
5308   routine allows bypassing that call.
5309 
5310 .seealso: [](ch_matrices), `Mat`, `MatTransposeSymbolic()`, `MatTranspose()`, `MatMultTranspose()`, `MatMultTransposeAdd()`, `MatIsTranspose()`, `MatReuse`, `MAT_INITIAL_MATRIX`, `MAT_REUSE_MATRIX`, `MAT_INPLACE_MATRIX`
5311 @*/
5312 PetscErrorCode MatTransposeSetPrecursor(Mat mat, Mat B)
5313 {
5314   MatParentState *rb = NULL;
5315 
5316   PetscFunctionBegin;
5317   PetscCall(PetscNew(&rb));
5318   rb->id    = ((PetscObject)mat)->id;
5319   rb->state = 0;
5320   PetscCall(MatGetNonzeroState(mat, &rb->nonzerostate));
5321   PetscCall(PetscObjectContainerCompose((PetscObject)B, "MatTransposeParent", rb, PetscContainerUserDestroyDefault));
5322   PetscFunctionReturn(PETSC_SUCCESS);
5323 }
5324 
5325 /*@
5326   MatTranspose - Computes an in-place or out-of-place transpose of a matrix.
5327 
5328   Collective
5329 
5330   Input Parameters:
5331 + mat   - the matrix to transpose
5332 - reuse - either `MAT_INITIAL_MATRIX`, `MAT_REUSE_MATRIX`, or `MAT_INPLACE_MATRIX`
5333 
5334   Output Parameter:
5335 . B - the transpose
5336 
5337   Level: intermediate
5338 
5339   Notes:
5340   If you use `MAT_INPLACE_MATRIX` then you must pass in `&mat` for `B`
5341 
5342   `MAT_REUSE_MATRIX` uses the `B` matrix obtained from a previous call to this function with `MAT_INITIAL_MATRIX`. If you already have a matrix to contain the
5343   transpose, call `MatTransposeSetPrecursor(mat, B)` before calling this routine.
5344 
5345   If the nonzero structure of mat changed from the previous call to this function with the same matrices an error will be generated for some matrix types.
5346 
5347   Consider using `MatCreateTranspose()` instead if you only need a matrix that behaves like the transpose, but don't need the storage to be changed.
5348 
5349   If mat is unchanged from the last call this function returns immediately without recomputing the result
5350 
5351   If you only need the symbolic transpose, and not the numerical values, use `MatTransposeSymbolic()`
5352 
5353 .seealso: [](ch_matrices), `Mat`, `MatTransposeSetPrecursor()`, `MatMultTranspose()`, `MatMultTransposeAdd()`, `MatIsTranspose()`, `MatReuse`, `MAT_INITIAL_MATRIX`, `MAT_REUSE_MATRIX`, `MAT_INPLACE_MATRIX`,
5354           `MatTransposeSymbolic()`, `MatCreateTranspose()`
5355 @*/
5356 PetscErrorCode MatTranspose(Mat mat, MatReuse reuse, Mat *B)
5357 {
5358   PetscContainer  rB = NULL;
5359   MatParentState *rb = NULL;
5360 
5361   PetscFunctionBegin;
5362   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
5363   PetscValidType(mat, 1);
5364   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
5365   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
5366   PetscCheck(reuse != MAT_INPLACE_MATRIX || mat == *B, PetscObjectComm((PetscObject)mat), PETSC_ERR_SUP, "MAT_INPLACE_MATRIX requires last matrix to match first");
5367   PetscCheck(reuse != MAT_REUSE_MATRIX || mat != *B, PetscObjectComm((PetscObject)mat), PETSC_ERR_SUP, "Perhaps you mean MAT_INPLACE_MATRIX");
5368   MatCheckPreallocated(mat, 1);
5369   if (reuse == MAT_REUSE_MATRIX) {
5370     PetscCall(PetscObjectQuery((PetscObject)*B, "MatTransposeParent", (PetscObject *)&rB));
5371     PetscCheck(rB, PetscObjectComm((PetscObject)*B), PETSC_ERR_ARG_WRONG, "Reuse matrix used was not generated from call to MatTranspose(). Suggest MatTransposeSetPrecursor().");
5372     PetscCall(PetscContainerGetPointer(rB, (void **)&rb));
5373     PetscCheck(rb->id == ((PetscObject)mat)->id, PetscObjectComm((PetscObject)*B), PETSC_ERR_ARG_WRONG, "Reuse matrix used was not generated from input matrix");
5374     if (rb->state == ((PetscObject)mat)->state) PetscFunctionReturn(PETSC_SUCCESS);
5375   }
5376 
5377   PetscCall(PetscLogEventBegin(MAT_Transpose, mat, 0, 0, 0));
5378   if (reuse != MAT_INPLACE_MATRIX || mat->symmetric != PETSC_BOOL3_TRUE) {
5379     PetscUseTypeMethod(mat, transpose, reuse, B);
5380     PetscCall(PetscObjectStateIncrease((PetscObject)*B));
5381   }
5382   PetscCall(PetscLogEventEnd(MAT_Transpose, mat, 0, 0, 0));
5383 
5384   if (reuse == MAT_INITIAL_MATRIX) PetscCall(MatTransposeSetPrecursor(mat, *B));
5385   if (reuse != MAT_INPLACE_MATRIX) {
5386     PetscCall(PetscObjectQuery((PetscObject)*B, "MatTransposeParent", (PetscObject *)&rB));
5387     PetscCall(PetscContainerGetPointer(rB, (void **)&rb));
5388     rb->state        = ((PetscObject)mat)->state;
5389     rb->nonzerostate = mat->nonzerostate;
5390   }
5391   PetscFunctionReturn(PETSC_SUCCESS);
5392 }
5393 
5394 /*@
5395   MatTransposeSymbolic - Computes the symbolic part of the transpose of a matrix.
5396 
5397   Collective
5398 
5399   Input Parameter:
5400 . A - the matrix to transpose
5401 
5402   Output Parameter:
5403 . B - the transpose. This is a complete matrix but the numerical portion is invalid. One can call `MatTranspose`(A,`MAT_REUSE_MATRIX`,&B) to compute the
5404       numerical portion.
5405 
5406   Level: intermediate
5407 
5408   Note:
5409   This is not supported for many matrix types, use `MatTranspose()` in those cases
5410 
5411 .seealso: [](ch_matrices), `Mat`, `MatTransposeSetPrecursor()`, `MatTranspose()`, `MatMultTranspose()`, `MatMultTransposeAdd()`, `MatIsTranspose()`, `MatReuse`, `MAT_INITIAL_MATRIX`, `MAT_REUSE_MATRIX`, `MAT_INPLACE_MATRIX`
5412 @*/
5413 PetscErrorCode MatTransposeSymbolic(Mat A, Mat *B)
5414 {
5415   PetscFunctionBegin;
5416   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
5417   PetscValidType(A, 1);
5418   PetscCheck(A->assembled, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
5419   PetscCheck(!A->factortype, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
5420   PetscCall(PetscLogEventBegin(MAT_Transpose, A, 0, 0, 0));
5421   PetscUseTypeMethod(A, transposesymbolic, B);
5422   PetscCall(PetscLogEventEnd(MAT_Transpose, A, 0, 0, 0));
5423 
5424   PetscCall(MatTransposeSetPrecursor(A, *B));
5425   PetscFunctionReturn(PETSC_SUCCESS);
5426 }
5427 
5428 PetscErrorCode MatTransposeCheckNonzeroState_Private(Mat A, Mat B)
5429 {
5430   PetscContainer  rB;
5431   MatParentState *rb;
5432 
5433   PetscFunctionBegin;
5434   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
5435   PetscValidType(A, 1);
5436   PetscCheck(A->assembled, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
5437   PetscCheck(!A->factortype, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
5438   PetscCall(PetscObjectQuery((PetscObject)B, "MatTransposeParent", (PetscObject *)&rB));
5439   PetscCheck(rB, PetscObjectComm((PetscObject)B), PETSC_ERR_ARG_WRONG, "Reuse matrix used was not generated from call to MatTranspose()");
5440   PetscCall(PetscContainerGetPointer(rB, (void **)&rb));
5441   PetscCheck(rb->id == ((PetscObject)A)->id, PetscObjectComm((PetscObject)B), PETSC_ERR_ARG_WRONG, "Reuse matrix used was not generated from input matrix");
5442   PetscCheck(rb->nonzerostate == A->nonzerostate, PetscObjectComm((PetscObject)B), PETSC_ERR_ARG_WRONGSTATE, "Reuse matrix has changed nonzero structure");
5443   PetscFunctionReturn(PETSC_SUCCESS);
5444 }
5445 
5446 /*@
5447   MatIsTranspose - Test whether a matrix is another one's transpose,
5448   or its own, in which case it tests symmetry.
5449 
5450   Collective
5451 
5452   Input Parameters:
5453 + A   - the matrix to test
5454 . B   - the matrix to test against, this can equal the first parameter
5455 - tol - tolerance, differences between entries smaller than this are counted as zero
5456 
5457   Output Parameter:
5458 . flg - the result
5459 
5460   Level: intermediate
5461 
5462   Notes:
5463   The sequential algorithm has a running time of the order of the number of nonzeros; the parallel
5464   test involves parallel copies of the block off-diagonal parts of the matrix.
5465 
5466 .seealso: [](ch_matrices), `Mat`, `MatTranspose()`, `MatIsSymmetric()`, `MatIsHermitian()`
5467 @*/
5468 PetscErrorCode MatIsTranspose(Mat A, Mat B, PetscReal tol, PetscBool *flg)
5469 {
5470   PetscErrorCode (*f)(Mat, Mat, PetscReal, PetscBool *), (*g)(Mat, Mat, PetscReal, PetscBool *);
5471 
5472   PetscFunctionBegin;
5473   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
5474   PetscValidHeaderSpecific(B, MAT_CLASSID, 2);
5475   PetscAssertPointer(flg, 4);
5476   PetscCall(PetscObjectQueryFunction((PetscObject)A, "MatIsTranspose_C", &f));
5477   PetscCall(PetscObjectQueryFunction((PetscObject)B, "MatIsTranspose_C", &g));
5478   *flg = PETSC_FALSE;
5479   if (f && g) {
5480     PetscCheck(f == g, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_NOTSAMETYPE, "Matrices do not have the same comparator for symmetry test");
5481     PetscCall((*f)(A, B, tol, flg));
5482   } else {
5483     MatType mattype;
5484 
5485     PetscCall(MatGetType(f ? B : A, &mattype));
5486     SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Matrix of type %s does not support checking for transpose", mattype);
5487   }
5488   PetscFunctionReturn(PETSC_SUCCESS);
5489 }
5490 
5491 /*@
5492   MatHermitianTranspose - Computes an in-place or out-of-place Hermitian transpose of a matrix in complex conjugate.
5493 
5494   Collective
5495 
5496   Input Parameters:
5497 + mat   - the matrix to transpose and complex conjugate
5498 - reuse - either `MAT_INITIAL_MATRIX`, `MAT_REUSE_MATRIX`, or `MAT_INPLACE_MATRIX`
5499 
5500   Output Parameter:
5501 . B - the Hermitian transpose
5502 
5503   Level: intermediate
5504 
5505 .seealso: [](ch_matrices), `Mat`, `MatTranspose()`, `MatMultTranspose()`, `MatMultTransposeAdd()`, `MatIsTranspose()`, `MatReuse`
5506 @*/
5507 PetscErrorCode MatHermitianTranspose(Mat mat, MatReuse reuse, Mat *B)
5508 {
5509   PetscFunctionBegin;
5510   PetscCall(MatTranspose(mat, reuse, B));
5511 #if defined(PETSC_USE_COMPLEX)
5512   PetscCall(MatConjugate(*B));
5513 #endif
5514   PetscFunctionReturn(PETSC_SUCCESS);
5515 }
5516 
5517 /*@
5518   MatIsHermitianTranspose - Test whether a matrix is another one's Hermitian transpose,
5519 
5520   Collective
5521 
5522   Input Parameters:
5523 + A   - the matrix to test
5524 . B   - the matrix to test against, this can equal the first parameter
5525 - tol - tolerance, differences between entries smaller than this are counted as zero
5526 
5527   Output Parameter:
5528 . flg - the result
5529 
5530   Level: intermediate
5531 
5532   Notes:
5533   Only available for `MATAIJ` matrices.
5534 
5535   The sequential algorithm
5536   has a running time of the order of the number of nonzeros; the parallel
5537   test involves parallel copies of the block off-diagonal parts of the matrix.
5538 
5539 .seealso: [](ch_matrices), `Mat`, `MatTranspose()`, `MatIsSymmetric()`, `MatIsHermitian()`, `MatIsTranspose()`
5540 @*/
5541 PetscErrorCode MatIsHermitianTranspose(Mat A, Mat B, PetscReal tol, PetscBool *flg)
5542 {
5543   PetscErrorCode (*f)(Mat, Mat, PetscReal, PetscBool *), (*g)(Mat, Mat, PetscReal, PetscBool *);
5544 
5545   PetscFunctionBegin;
5546   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
5547   PetscValidHeaderSpecific(B, MAT_CLASSID, 2);
5548   PetscAssertPointer(flg, 4);
5549   PetscCall(PetscObjectQueryFunction((PetscObject)A, "MatIsHermitianTranspose_C", &f));
5550   PetscCall(PetscObjectQueryFunction((PetscObject)B, "MatIsHermitianTranspose_C", &g));
5551   if (f && g) {
5552     PetscCheck(f != g, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_NOTSAMETYPE, "Matrices do not have the same comparator for Hermitian test");
5553     PetscCall((*f)(A, B, tol, flg));
5554   }
5555   PetscFunctionReturn(PETSC_SUCCESS);
5556 }
5557 
5558 /*@
5559   MatPermute - Creates a new matrix with rows and columns permuted from the
5560   original.
5561 
5562   Collective
5563 
5564   Input Parameters:
5565 + mat - the matrix to permute
5566 . row - row permutation, each processor supplies only the permutation for its rows
5567 - col - column permutation, each processor supplies only the permutation for its columns
5568 
5569   Output Parameter:
5570 . B - the permuted matrix
5571 
5572   Level: advanced
5573 
5574   Note:
5575   The index sets map from row/col of permuted matrix to row/col of original matrix.
5576   The index sets should be on the same communicator as mat and have the same local sizes.
5577 
5578   Developer Note:
5579   If you want to implement `MatPermute()` for a matrix type, and your approach doesn't
5580   exploit the fact that row and col are permutations, consider implementing the
5581   more general `MatCreateSubMatrix()` instead.
5582 
5583 .seealso: [](ch_matrices), `Mat`, `MatGetOrdering()`, `ISAllGather()`, `MatCreateSubMatrix()`
5584 @*/
5585 PetscErrorCode MatPermute(Mat mat, IS row, IS col, Mat *B)
5586 {
5587   PetscFunctionBegin;
5588   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
5589   PetscValidType(mat, 1);
5590   PetscValidHeaderSpecific(row, IS_CLASSID, 2);
5591   PetscValidHeaderSpecific(col, IS_CLASSID, 3);
5592   PetscAssertPointer(B, 4);
5593   PetscCheckSameComm(mat, 1, row, 2);
5594   if (row != col) PetscCheckSameComm(row, 2, col, 3);
5595   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
5596   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
5597   PetscCheck(mat->ops->permute || mat->ops->createsubmatrix, PETSC_COMM_SELF, PETSC_ERR_SUP, "MatPermute not available for Mat type %s", ((PetscObject)mat)->type_name);
5598   MatCheckPreallocated(mat, 1);
5599 
5600   if (mat->ops->permute) {
5601     PetscUseTypeMethod(mat, permute, row, col, B);
5602     PetscCall(PetscObjectStateIncrease((PetscObject)*B));
5603   } else {
5604     PetscCall(MatCreateSubMatrix(mat, row, col, MAT_INITIAL_MATRIX, B));
5605   }
5606   PetscFunctionReturn(PETSC_SUCCESS);
5607 }
5608 
5609 /*@
5610   MatEqual - Compares two matrices.
5611 
5612   Collective
5613 
5614   Input Parameters:
5615 + A - the first matrix
5616 - B - the second matrix
5617 
5618   Output Parameter:
5619 . flg - `PETSC_TRUE` if the matrices are equal; `PETSC_FALSE` otherwise.
5620 
5621   Level: intermediate
5622 
5623 .seealso: [](ch_matrices), `Mat`
5624 @*/
5625 PetscErrorCode MatEqual(Mat A, Mat B, PetscBool *flg)
5626 {
5627   PetscFunctionBegin;
5628   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
5629   PetscValidHeaderSpecific(B, MAT_CLASSID, 2);
5630   PetscValidType(A, 1);
5631   PetscValidType(B, 2);
5632   PetscAssertPointer(flg, 3);
5633   PetscCheckSameComm(A, 1, B, 2);
5634   MatCheckPreallocated(A, 1);
5635   MatCheckPreallocated(B, 2);
5636   PetscCheck(A->assembled, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
5637   PetscCheck(B->assembled, PetscObjectComm((PetscObject)B), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
5638   PetscCheck(A->rmap->N == B->rmap->N && A->cmap->N == B->cmap->N, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Mat A,Mat B: global dim %" PetscInt_FMT " %" PetscInt_FMT " %" PetscInt_FMT " %" PetscInt_FMT, A->rmap->N, B->rmap->N, A->cmap->N,
5639              B->cmap->N);
5640   if (A->ops->equal && A->ops->equal == B->ops->equal) {
5641     PetscUseTypeMethod(A, equal, B, flg);
5642   } else {
5643     PetscCall(MatMultEqual(A, B, 10, flg));
5644   }
5645   PetscFunctionReturn(PETSC_SUCCESS);
5646 }
5647 
5648 /*@
5649   MatDiagonalScale - Scales a matrix on the left and right by diagonal
5650   matrices that are stored as vectors.  Either of the two scaling
5651   matrices can be `NULL`.
5652 
5653   Collective
5654 
5655   Input Parameters:
5656 + mat - the matrix to be scaled
5657 . l   - the left scaling vector (or `NULL`)
5658 - r   - the right scaling vector (or `NULL`)
5659 
5660   Level: intermediate
5661 
5662   Note:
5663   `MatDiagonalScale()` computes $A = LAR$, where
5664   L = a diagonal matrix (stored as a vector), R = a diagonal matrix (stored as a vector)
5665   The L scales the rows of the matrix, the R scales the columns of the matrix.
5666 
5667 .seealso: [](ch_matrices), `Mat`, `MatScale()`, `MatShift()`, `MatDiagonalSet()`
5668 @*/
5669 PetscErrorCode MatDiagonalScale(Mat mat, Vec l, Vec r)
5670 {
5671   PetscFunctionBegin;
5672   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
5673   PetscValidType(mat, 1);
5674   if (l) {
5675     PetscValidHeaderSpecific(l, VEC_CLASSID, 2);
5676     PetscCheckSameComm(mat, 1, l, 2);
5677   }
5678   if (r) {
5679     PetscValidHeaderSpecific(r, VEC_CLASSID, 3);
5680     PetscCheckSameComm(mat, 1, r, 3);
5681   }
5682   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
5683   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
5684   MatCheckPreallocated(mat, 1);
5685   if (!l && !r) PetscFunctionReturn(PETSC_SUCCESS);
5686 
5687   PetscCall(PetscLogEventBegin(MAT_Scale, mat, 0, 0, 0));
5688   PetscUseTypeMethod(mat, diagonalscale, l, r);
5689   PetscCall(PetscLogEventEnd(MAT_Scale, mat, 0, 0, 0));
5690   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
5691   if (l != r) mat->symmetric = PETSC_BOOL3_FALSE;
5692   PetscFunctionReturn(PETSC_SUCCESS);
5693 }
5694 
5695 /*@
5696   MatScale - Scales all elements of a matrix by a given number.
5697 
5698   Logically Collective
5699 
5700   Input Parameters:
5701 + mat - the matrix to be scaled
5702 - a   - the scaling value
5703 
5704   Level: intermediate
5705 
5706 .seealso: [](ch_matrices), `Mat`, `MatDiagonalScale()`
5707 @*/
5708 PetscErrorCode MatScale(Mat mat, PetscScalar a)
5709 {
5710   PetscFunctionBegin;
5711   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
5712   PetscValidType(mat, 1);
5713   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
5714   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
5715   PetscValidLogicalCollectiveScalar(mat, a, 2);
5716   MatCheckPreallocated(mat, 1);
5717 
5718   PetscCall(PetscLogEventBegin(MAT_Scale, mat, 0, 0, 0));
5719   if (a != (PetscScalar)1.0) {
5720     PetscUseTypeMethod(mat, scale, a);
5721     PetscCall(PetscObjectStateIncrease((PetscObject)mat));
5722   }
5723   PetscCall(PetscLogEventEnd(MAT_Scale, mat, 0, 0, 0));
5724   PetscFunctionReturn(PETSC_SUCCESS);
5725 }
5726 
5727 /*@
5728   MatNorm - Calculates various norms of a matrix.
5729 
5730   Collective
5731 
5732   Input Parameters:
5733 + mat  - the matrix
5734 - type - the type of norm, `NORM_1`, `NORM_FROBENIUS`, `NORM_INFINITY`
5735 
5736   Output Parameter:
5737 . nrm - the resulting norm
5738 
5739   Level: intermediate
5740 
5741 .seealso: [](ch_matrices), `Mat`
5742 @*/
5743 PetscErrorCode MatNorm(Mat mat, NormType type, PetscReal *nrm)
5744 {
5745   PetscFunctionBegin;
5746   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
5747   PetscValidType(mat, 1);
5748   PetscAssertPointer(nrm, 3);
5749 
5750   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
5751   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
5752   MatCheckPreallocated(mat, 1);
5753 
5754   PetscUseTypeMethod(mat, norm, type, nrm);
5755   PetscFunctionReturn(PETSC_SUCCESS);
5756 }
5757 
5758 /*
5759      This variable is used to prevent counting of MatAssemblyBegin() that
5760    are called from within a MatAssemblyEnd().
5761 */
5762 static PetscInt MatAssemblyEnd_InUse = 0;
5763 /*@
5764   MatAssemblyBegin - Begins assembling the matrix.  This routine should
5765   be called after completing all calls to `MatSetValues()`.
5766 
5767   Collective
5768 
5769   Input Parameters:
5770 + mat  - the matrix
5771 - type - type of assembly, either `MAT_FLUSH_ASSEMBLY` or `MAT_FINAL_ASSEMBLY`
5772 
5773   Level: beginner
5774 
5775   Notes:
5776   `MatSetValues()` generally caches the values that belong to other MPI processes.  The matrix is ready to
5777   use only after `MatAssemblyBegin()` and `MatAssemblyEnd()` have been called.
5778 
5779   Use `MAT_FLUSH_ASSEMBLY` when switching between `ADD_VALUES` and `INSERT_VALUES`
5780   in `MatSetValues()`; use `MAT_FINAL_ASSEMBLY` for the final assembly before
5781   using the matrix.
5782 
5783   ALL processes that share a matrix MUST call `MatAssemblyBegin()` and `MatAssemblyEnd()` the SAME NUMBER of times, and each time with the
5784   same flag of `MAT_FLUSH_ASSEMBLY` or `MAT_FINAL_ASSEMBLY` for all processes. Thus you CANNOT locally change from `ADD_VALUES` to `INSERT_VALUES`, that is
5785   a global collective operation requiring all processes that share the matrix.
5786 
5787   Space for preallocated nonzeros that is not filled by a call to `MatSetValues()` or a related routine are compressed
5788   out by assembly. If you intend to use that extra space on a subsequent assembly, be sure to insert explicit zeros
5789   before `MAT_FINAL_ASSEMBLY` so the space is not compressed out.
5790 
5791 .seealso: [](ch_matrices), `Mat`, `MatAssemblyEnd()`, `MatSetValues()`, `MatAssembled()`
5792 @*/
5793 PetscErrorCode MatAssemblyBegin(Mat mat, MatAssemblyType type)
5794 {
5795   PetscFunctionBegin;
5796   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
5797   PetscValidType(mat, 1);
5798   MatCheckPreallocated(mat, 1);
5799   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix. Did you forget to call MatSetUnfactored()?");
5800   if (mat->assembled) {
5801     mat->was_assembled = PETSC_TRUE;
5802     mat->assembled     = PETSC_FALSE;
5803   }
5804 
5805   if (!MatAssemblyEnd_InUse) {
5806     PetscCall(PetscLogEventBegin(MAT_AssemblyBegin, mat, 0, 0, 0));
5807     PetscTryTypeMethod(mat, assemblybegin, type);
5808     PetscCall(PetscLogEventEnd(MAT_AssemblyBegin, mat, 0, 0, 0));
5809   } else PetscTryTypeMethod(mat, assemblybegin, type);
5810   PetscFunctionReturn(PETSC_SUCCESS);
5811 }
5812 
5813 /*@
5814   MatAssembled - Indicates if a matrix has been assembled and is ready for
5815   use; for example, in matrix-vector product.
5816 
5817   Not Collective
5818 
5819   Input Parameter:
5820 . mat - the matrix
5821 
5822   Output Parameter:
5823 . assembled - `PETSC_TRUE` or `PETSC_FALSE`
5824 
5825   Level: advanced
5826 
5827 .seealso: [](ch_matrices), `Mat`, `MatAssemblyEnd()`, `MatSetValues()`, `MatAssemblyBegin()`
5828 @*/
5829 PetscErrorCode MatAssembled(Mat mat, PetscBool *assembled)
5830 {
5831   PetscFunctionBegin;
5832   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
5833   PetscAssertPointer(assembled, 2);
5834   *assembled = mat->assembled;
5835   PetscFunctionReturn(PETSC_SUCCESS);
5836 }
5837 
5838 /*@
5839   MatAssemblyEnd - Completes assembling the matrix.  This routine should
5840   be called after `MatAssemblyBegin()`.
5841 
5842   Collective
5843 
5844   Input Parameters:
5845 + mat  - the matrix
5846 - type - type of assembly, either `MAT_FLUSH_ASSEMBLY` or `MAT_FINAL_ASSEMBLY`
5847 
5848   Options Database Keys:
5849 + -mat_view ::ascii_info             - Prints info on matrix at conclusion of `MatAssemblyEnd()`
5850 . -mat_view ::ascii_info_detail      - Prints more detailed info
5851 . -mat_view                          - Prints matrix in ASCII format
5852 . -mat_view ::ascii_matlab           - Prints matrix in MATLAB format
5853 . -mat_view draw                     - draws nonzero structure of matrix, using `MatView()` and `PetscDrawOpenX()`.
5854 . -display <name>                    - Sets display name (default is host)
5855 . -draw_pause <sec>                  - Sets number of seconds to pause after display
5856 . -mat_view socket                   - Sends matrix to socket, can be accessed from MATLAB (See [Using MATLAB with PETSc](ch_matlab))
5857 . -viewer_socket_machine <machine>   - Machine to use for socket
5858 . -viewer_socket_port <port>         - Port number to use for socket
5859 - -mat_view binary:filename[:append] - Save matrix to file in binary format
5860 
5861   Level: beginner
5862 
5863 .seealso: [](ch_matrices), `Mat`, `MatAssemblyBegin()`, `MatSetValues()`, `PetscDrawOpenX()`, `PetscDrawCreate()`, `MatView()`, `MatAssembled()`, `PetscViewerSocketOpen()`
5864 @*/
5865 PetscErrorCode MatAssemblyEnd(Mat mat, MatAssemblyType type)
5866 {
5867   static PetscInt inassm = 0;
5868   PetscBool       flg    = PETSC_FALSE;
5869 
5870   PetscFunctionBegin;
5871   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
5872   PetscValidType(mat, 1);
5873 
5874   inassm++;
5875   MatAssemblyEnd_InUse++;
5876   if (MatAssemblyEnd_InUse == 1) { /* Do the logging only the first time through */
5877     PetscCall(PetscLogEventBegin(MAT_AssemblyEnd, mat, 0, 0, 0));
5878     PetscTryTypeMethod(mat, assemblyend, type);
5879     PetscCall(PetscLogEventEnd(MAT_AssemblyEnd, mat, 0, 0, 0));
5880   } else PetscTryTypeMethod(mat, assemblyend, type);
5881 
5882   /* Flush assembly is not a true assembly */
5883   if (type != MAT_FLUSH_ASSEMBLY) {
5884     if (mat->num_ass) {
5885       if (!mat->symmetry_eternal) {
5886         mat->symmetric = PETSC_BOOL3_UNKNOWN;
5887         mat->hermitian = PETSC_BOOL3_UNKNOWN;
5888       }
5889       if (!mat->structural_symmetry_eternal && mat->ass_nonzerostate != mat->nonzerostate) mat->structurally_symmetric = PETSC_BOOL3_UNKNOWN;
5890       if (!mat->spd_eternal) mat->spd = PETSC_BOOL3_UNKNOWN;
5891     }
5892     mat->num_ass++;
5893     mat->assembled        = PETSC_TRUE;
5894     mat->ass_nonzerostate = mat->nonzerostate;
5895   }
5896 
5897   mat->insertmode = NOT_SET_VALUES;
5898   MatAssemblyEnd_InUse--;
5899   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
5900   if (inassm == 1 && type != MAT_FLUSH_ASSEMBLY) {
5901     PetscCall(MatViewFromOptions(mat, NULL, "-mat_view"));
5902 
5903     if (mat->checksymmetryonassembly) {
5904       PetscCall(MatIsSymmetric(mat, mat->checksymmetrytol, &flg));
5905       if (flg) {
5906         PetscCall(PetscPrintf(PetscObjectComm((PetscObject)mat), "Matrix is symmetric (tolerance %g)\n", (double)mat->checksymmetrytol));
5907       } else {
5908         PetscCall(PetscPrintf(PetscObjectComm((PetscObject)mat), "Matrix is not symmetric (tolerance %g)\n", (double)mat->checksymmetrytol));
5909       }
5910     }
5911     if (mat->nullsp && mat->checknullspaceonassembly) PetscCall(MatNullSpaceTest(mat->nullsp, mat, NULL));
5912   }
5913   inassm--;
5914   PetscFunctionReturn(PETSC_SUCCESS);
5915 }
5916 
5917 // PetscClangLinter pragma disable: -fdoc-section-header-unknown
5918 /*@
5919   MatSetOption - Sets a parameter option for a matrix. Some options
5920   may be specific to certain storage formats.  Some options
5921   determine how values will be inserted (or added). Sorted,
5922   row-oriented input will generally assemble the fastest. The default
5923   is row-oriented.
5924 
5925   Logically Collective for certain operations, such as `MAT_SPD`, not collective for `MAT_ROW_ORIENTED`, see `MatOption`
5926 
5927   Input Parameters:
5928 + mat - the matrix
5929 . op  - the option, one of those listed below (and possibly others),
5930 - flg - turn the option on (`PETSC_TRUE`) or off (`PETSC_FALSE`)
5931 
5932   Options Describing Matrix Structure:
5933 + `MAT_SPD`                         - symmetric positive definite
5934 . `MAT_SYMMETRIC`                   - symmetric in terms of both structure and value
5935 . `MAT_HERMITIAN`                   - transpose is the complex conjugation
5936 . `MAT_STRUCTURALLY_SYMMETRIC`      - symmetric nonzero structure
5937 . `MAT_SYMMETRY_ETERNAL`            - indicates the symmetry (or Hermitian structure) or its absence will persist through any changes to the matrix
5938 . `MAT_STRUCTURAL_SYMMETRY_ETERNAL` - indicates the structural symmetry or its absence will persist through any changes to the matrix
5939 . `MAT_SPD_ETERNAL`                 - indicates the value of `MAT_SPD` (true or false) will persist through any changes to the matrix
5940 
5941    These are not really options of the matrix, they are knowledge about the structure of the matrix that users may provide so that they
5942    do not need to be computed (usually at a high cost)
5943 
5944    Options For Use with `MatSetValues()`:
5945    Insert a logically dense subblock, which can be
5946 . `MAT_ROW_ORIENTED`                - row-oriented (default)
5947 
5948    These options reflect the data you pass in with `MatSetValues()`; it has
5949    nothing to do with how the data is stored internally in the matrix
5950    data structure.
5951 
5952    When (re)assembling a matrix, we can restrict the input for
5953    efficiency/debugging purposes.  These options include
5954 . `MAT_NEW_NONZERO_LOCATIONS`       - additional insertions will be allowed if they generate a new nonzero (slow)
5955 . `MAT_FORCE_DIAGONAL_ENTRIES`      - forces diagonal entries to be allocated
5956 . `MAT_IGNORE_OFF_PROC_ENTRIES`     - drops off-processor entries
5957 . `MAT_NEW_NONZERO_LOCATION_ERR`    - generates an error for new matrix entry
5958 . `MAT_USE_HASH_TABLE`              - uses a hash table to speed up matrix assembly
5959 . `MAT_NO_OFF_PROC_ENTRIES`         - you know each process will only set values for its own rows, will generate an error if
5960         any process sets values for another process. This avoids all reductions in the MatAssembly routines and thus improves
5961         performance for very large process counts.
5962 - `MAT_SUBSET_OFF_PROC_ENTRIES`     - you know that the first assembly after setting this flag will set a superset
5963         of the off-process entries required for all subsequent assemblies. This avoids a rendezvous step in the MatAssembly
5964         functions, instead sending only neighbor messages.
5965 
5966   Level: intermediate
5967 
5968   Notes:
5969   Except for `MAT_UNUSED_NONZERO_LOCATION_ERR` and  `MAT_ROW_ORIENTED` all processes that share the matrix must pass the same value in flg!
5970 
5971   Some options are relevant only for particular matrix types and
5972   are thus ignored by others.  Other options are not supported by
5973   certain matrix types and will generate an error message if set.
5974 
5975   If using Fortran to compute a matrix, one may need to
5976   use the column-oriented option (or convert to the row-oriented
5977   format).
5978 
5979   `MAT_NEW_NONZERO_LOCATIONS` set to `PETSC_FALSE` indicates that any add or insertion
5980   that would generate a new entry in the nonzero structure is instead
5981   ignored.  Thus, if memory has not already been allocated for this particular
5982   data, then the insertion is ignored. For dense matrices, in which
5983   the entire array is allocated, no entries are ever ignored.
5984   Set after the first `MatAssemblyEnd()`. If this option is set, then the `MatAssemblyBegin()`/`MatAssemblyEnd()` processes has one less global reduction
5985 
5986   `MAT_NEW_NONZERO_LOCATION_ERR` set to PETSC_TRUE indicates that any add or insertion
5987   that would generate a new entry in the nonzero structure instead produces
5988   an error. (Currently supported for `MATAIJ` and `MATBAIJ` formats only.) If this option is set, then the `MatAssemblyBegin()`/`MatAssemblyEnd()` processes has one less global reduction
5989 
5990   `MAT_NEW_NONZERO_ALLOCATION_ERR` set to `PETSC_TRUE` indicates that any add or insertion
5991   that would generate a new entry that has not been preallocated will
5992   instead produce an error. (Currently supported for `MATAIJ` and `MATBAIJ` formats
5993   only.) This is a useful flag when debugging matrix memory preallocation.
5994   If this option is set, then the `MatAssemblyBegin()`/`MatAssemblyEnd()` processes has one less global reduction
5995 
5996   `MAT_IGNORE_OFF_PROC_ENTRIES` set to `PETSC_TRUE` indicates entries destined for
5997   other processors should be dropped, rather than stashed.
5998   This is useful if you know that the "owning" processor is also
5999   always generating the correct matrix entries, so that PETSc need
6000   not transfer duplicate entries generated on another processor.
6001 
6002   `MAT_USE_HASH_TABLE` indicates that a hash table be used to improve the
6003   searches during matrix assembly. When this flag is set, the hash table
6004   is created during the first matrix assembly. This hash table is
6005   used the next time through, during `MatSetValues()`/`MatSetValuesBlocked()`
6006   to improve the searching of indices. `MAT_NEW_NONZERO_LOCATIONS` flag
6007   should be used with `MAT_USE_HASH_TABLE` flag. This option is currently
6008   supported by `MATMPIBAIJ` format only.
6009 
6010   `MAT_KEEP_NONZERO_PATTERN` indicates when `MatZeroRows()` is called the zeroed entries
6011   are kept in the nonzero structure. This flag is not used for `MatZeroRowsColumns()`
6012 
6013   `MAT_IGNORE_ZERO_ENTRIES` - for `MATAIJ` and `MATIS` matrices this will stop zero values from creating
6014   a zero location in the matrix
6015 
6016   `MAT_USE_INODES` - indicates using inode version of the code - works with `MATAIJ` matrix types
6017 
6018   `MAT_NO_OFF_PROC_ZERO_ROWS` - you know each process will only zero its own rows. This avoids all reductions in the
6019   zero row routines and thus improves performance for very large process counts.
6020 
6021   `MAT_IGNORE_LOWER_TRIANGULAR` - For `MATSBAIJ` matrices will ignore any insertions you make in the lower triangular
6022   part of the matrix (since they should match the upper triangular part).
6023 
6024   `MAT_SORTED_FULL` - each process provides exactly its local rows; all column indices for a given row are passed in a
6025   single call to `MatSetValues()`, preallocation is perfect, row-oriented, `INSERT_VALUES` is used. Common
6026   with finite difference schemes with non-periodic boundary conditions.
6027 
6028   Developer Note:
6029   `MAT_SYMMETRY_ETERNAL`, `MAT_STRUCTURAL_SYMMETRY_ETERNAL`, and `MAT_SPD_ETERNAL` are used by `MatAssemblyEnd()` and in other
6030   places where otherwise the value of `MAT_SYMMETRIC`, `MAT_STRUCTURALLY_SYMMETRIC` or `MAT_SPD` would need to be changed back
6031   to `PETSC_BOOL3_UNKNOWN` because the matrix values had changed so the code cannot be certain that the related property had
6032   not changed.
6033 
6034 .seealso: [](ch_matrices), `MatOption`, `Mat`, `MatGetOption()`
6035 @*/
6036 PetscErrorCode MatSetOption(Mat mat, MatOption op, PetscBool flg)
6037 {
6038   PetscFunctionBegin;
6039   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
6040   if (op > 0) {
6041     PetscValidLogicalCollectiveEnum(mat, op, 2);
6042     PetscValidLogicalCollectiveBool(mat, flg, 3);
6043   }
6044 
6045   PetscCheck(((int)op) > MAT_OPTION_MIN && ((int)op) < MAT_OPTION_MAX, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_OUTOFRANGE, "Options %d is out of range", (int)op);
6046 
6047   switch (op) {
6048   case MAT_FORCE_DIAGONAL_ENTRIES:
6049     mat->force_diagonals = flg;
6050     PetscFunctionReturn(PETSC_SUCCESS);
6051   case MAT_NO_OFF_PROC_ENTRIES:
6052     mat->nooffprocentries = flg;
6053     PetscFunctionReturn(PETSC_SUCCESS);
6054   case MAT_SUBSET_OFF_PROC_ENTRIES:
6055     mat->assembly_subset = flg;
6056     if (!mat->assembly_subset) { /* See the same logic in VecAssembly wrt VEC_SUBSET_OFF_PROC_ENTRIES */
6057 #if !defined(PETSC_HAVE_MPIUNI)
6058       PetscCall(MatStashScatterDestroy_BTS(&mat->stash));
6059 #endif
6060       mat->stash.first_assembly_done = PETSC_FALSE;
6061     }
6062     PetscFunctionReturn(PETSC_SUCCESS);
6063   case MAT_NO_OFF_PROC_ZERO_ROWS:
6064     mat->nooffproczerorows = flg;
6065     PetscFunctionReturn(PETSC_SUCCESS);
6066   case MAT_SPD:
6067     if (flg) {
6068       mat->spd                    = PETSC_BOOL3_TRUE;
6069       mat->symmetric              = PETSC_BOOL3_TRUE;
6070       mat->structurally_symmetric = PETSC_BOOL3_TRUE;
6071     } else {
6072       mat->spd = PETSC_BOOL3_FALSE;
6073     }
6074     break;
6075   case MAT_SYMMETRIC:
6076     mat->symmetric = flg ? PETSC_BOOL3_TRUE : PETSC_BOOL3_FALSE;
6077     if (flg) mat->structurally_symmetric = PETSC_BOOL3_TRUE;
6078 #if !defined(PETSC_USE_COMPLEX)
6079     mat->hermitian = flg ? PETSC_BOOL3_TRUE : PETSC_BOOL3_FALSE;
6080 #endif
6081     break;
6082   case MAT_HERMITIAN:
6083     mat->hermitian = flg ? PETSC_BOOL3_TRUE : PETSC_BOOL3_FALSE;
6084     if (flg) mat->structurally_symmetric = PETSC_BOOL3_TRUE;
6085 #if !defined(PETSC_USE_COMPLEX)
6086     mat->symmetric = flg ? PETSC_BOOL3_TRUE : PETSC_BOOL3_FALSE;
6087 #endif
6088     break;
6089   case MAT_STRUCTURALLY_SYMMETRIC:
6090     mat->structurally_symmetric = flg ? PETSC_BOOL3_TRUE : PETSC_BOOL3_FALSE;
6091     break;
6092   case MAT_SYMMETRY_ETERNAL:
6093     PetscCheck(mat->symmetric != PETSC_BOOL3_UNKNOWN, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Cannot set MAT_SYMMETRY_ETERNAL without first setting MAT_SYMMETRIC to true or false");
6094     mat->symmetry_eternal = flg;
6095     if (flg) mat->structural_symmetry_eternal = PETSC_TRUE;
6096     break;
6097   case MAT_STRUCTURAL_SYMMETRY_ETERNAL:
6098     PetscCheck(mat->structurally_symmetric != PETSC_BOOL3_UNKNOWN, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Cannot set MAT_STRUCTURAL_SYMMETRY_ETERNAL without first setting MAT_STRUCTURALLY_SYMMETRIC to true or false");
6099     mat->structural_symmetry_eternal = flg;
6100     break;
6101   case MAT_SPD_ETERNAL:
6102     PetscCheck(mat->spd != PETSC_BOOL3_UNKNOWN, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Cannot set MAT_SPD_ETERNAL without first setting MAT_SPD to true or false");
6103     mat->spd_eternal = flg;
6104     if (flg) {
6105       mat->structural_symmetry_eternal = PETSC_TRUE;
6106       mat->symmetry_eternal            = PETSC_TRUE;
6107     }
6108     break;
6109   case MAT_STRUCTURE_ONLY:
6110     mat->structure_only = flg;
6111     break;
6112   case MAT_SORTED_FULL:
6113     mat->sortedfull = flg;
6114     break;
6115   default:
6116     break;
6117   }
6118   PetscTryTypeMethod(mat, setoption, op, flg);
6119   PetscFunctionReturn(PETSC_SUCCESS);
6120 }
6121 
6122 /*@
6123   MatGetOption - Gets a parameter option that has been set for a matrix.
6124 
6125   Logically Collective
6126 
6127   Input Parameters:
6128 + mat - the matrix
6129 - op  - the option, this only responds to certain options, check the code for which ones
6130 
6131   Output Parameter:
6132 . flg - turn the option on (`PETSC_TRUE`) or off (`PETSC_FALSE`)
6133 
6134   Level: intermediate
6135 
6136   Notes:
6137   Can only be called after `MatSetSizes()` and `MatSetType()` have been set.
6138 
6139   Certain option values may be unknown, for those use the routines `MatIsSymmetric()`, `MatIsHermitian()`, `MatIsStructurallySymmetric()`, or
6140   `MatIsSymmetricKnown()`, `MatIsHermitianKnown()`, `MatIsStructurallySymmetricKnown()`
6141 
6142 .seealso: [](ch_matrices), `Mat`, `MatOption`, `MatSetOption()`, `MatIsSymmetric()`, `MatIsHermitian()`, `MatIsStructurallySymmetric()`,
6143     `MatIsSymmetricKnown()`, `MatIsHermitianKnown()`, `MatIsStructurallySymmetricKnown()`
6144 @*/
6145 PetscErrorCode MatGetOption(Mat mat, MatOption op, PetscBool *flg)
6146 {
6147   PetscFunctionBegin;
6148   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
6149   PetscValidType(mat, 1);
6150 
6151   PetscCheck(((int)op) > MAT_OPTION_MIN && ((int)op) < MAT_OPTION_MAX, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_OUTOFRANGE, "Options %d is out of range", (int)op);
6152   PetscCheck(((PetscObject)mat)->type_name, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_TYPENOTSET, "Cannot get options until type and size have been set, see MatSetType() and MatSetSizes()");
6153 
6154   switch (op) {
6155   case MAT_NO_OFF_PROC_ENTRIES:
6156     *flg = mat->nooffprocentries;
6157     break;
6158   case MAT_NO_OFF_PROC_ZERO_ROWS:
6159     *flg = mat->nooffproczerorows;
6160     break;
6161   case MAT_SYMMETRIC:
6162     SETERRQ(PetscObjectComm((PetscObject)mat), PETSC_ERR_SUP, "Use MatIsSymmetric() or MatIsSymmetricKnown()");
6163     break;
6164   case MAT_HERMITIAN:
6165     SETERRQ(PetscObjectComm((PetscObject)mat), PETSC_ERR_SUP, "Use MatIsHermitian() or MatIsHermitianKnown()");
6166     break;
6167   case MAT_STRUCTURALLY_SYMMETRIC:
6168     SETERRQ(PetscObjectComm((PetscObject)mat), PETSC_ERR_SUP, "Use MatIsStructurallySymmetric() or MatIsStructurallySymmetricKnown()");
6169     break;
6170   case MAT_SPD:
6171     SETERRQ(PetscObjectComm((PetscObject)mat), PETSC_ERR_SUP, "Use MatIsSPDKnown()");
6172     break;
6173   case MAT_SYMMETRY_ETERNAL:
6174     *flg = mat->symmetry_eternal;
6175     break;
6176   case MAT_STRUCTURAL_SYMMETRY_ETERNAL:
6177     *flg = mat->symmetry_eternal;
6178     break;
6179   default:
6180     break;
6181   }
6182   PetscFunctionReturn(PETSC_SUCCESS);
6183 }
6184 
6185 /*@
6186   MatZeroEntries - Zeros all entries of a matrix.  For sparse matrices
6187   this routine retains the old nonzero structure.
6188 
6189   Logically Collective
6190 
6191   Input Parameter:
6192 . mat - the matrix
6193 
6194   Level: intermediate
6195 
6196   Note:
6197   If the matrix was not preallocated then a default, likely poor preallocation will be set in the matrix, so this should be called after the preallocation phase.
6198   See the Performance chapter of the users manual for information on preallocating matrices.
6199 
6200 .seealso: [](ch_matrices), `Mat`, `MatZeroRows()`, `MatZeroRowsColumns()`
6201 @*/
6202 PetscErrorCode MatZeroEntries(Mat mat)
6203 {
6204   PetscFunctionBegin;
6205   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
6206   PetscValidType(mat, 1);
6207   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
6208   PetscCheck(mat->insertmode == NOT_SET_VALUES, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for matrices where you have set values but not yet assembled");
6209   MatCheckPreallocated(mat, 1);
6210 
6211   PetscCall(PetscLogEventBegin(MAT_ZeroEntries, mat, 0, 0, 0));
6212   PetscUseTypeMethod(mat, zeroentries);
6213   PetscCall(PetscLogEventEnd(MAT_ZeroEntries, mat, 0, 0, 0));
6214   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
6215   PetscFunctionReturn(PETSC_SUCCESS);
6216 }
6217 
6218 /*@
6219   MatZeroRowsColumns - Zeros all entries (except possibly the main diagonal)
6220   of a set of rows and columns of a matrix.
6221 
6222   Collective
6223 
6224   Input Parameters:
6225 + mat     - the matrix
6226 . numRows - the number of rows/columns to zero
6227 . rows    - the global row indices
6228 . diag    - value put in the diagonal of the eliminated rows
6229 . x       - optional vector of the solution for zeroed rows (other entries in vector are not used), these must be set before this call
6230 - b       - optional vector of the right-hand side, that will be adjusted by provided solution entries
6231 
6232   Level: intermediate
6233 
6234   Notes:
6235   This routine, along with `MatZeroRows()`, is typically used to eliminate known Dirichlet boundary conditions from a linear system.
6236 
6237   For each zeroed row, the value of the corresponding `b` is set to diag times the value of the corresponding `x`.
6238   The other entries of `b` will be adjusted by the known values of `x` times the corresponding matrix entries in the columns that are being eliminated
6239 
6240   If the resulting linear system is to be solved with `KSP` then one can (but does not have to) call `KSPSetInitialGuessNonzero()` to allow the
6241   Krylov method to take advantage of the known solution on the zeroed rows.
6242 
6243   For the parallel case, all processes that share the matrix (i.e.,
6244   those in the communicator used for matrix creation) MUST call this
6245   routine, regardless of whether any rows being zeroed are owned by
6246   them.
6247 
6248   Unlike `MatZeroRows()`, this ignores the `MAT_KEEP_NONZERO_PATTERN` option value set with `MatSetOption()`, it merely zeros those entries in the matrix, but never
6249   removes them from the nonzero pattern. The nonzero pattern of the matrix can still change if a nonzero needs to be inserted on a diagonal entry that was previously
6250   missing.
6251 
6252   Each processor can indicate any rows in the entire matrix to be zeroed (i.e. each process does NOT have to
6253   list only rows local to itself).
6254 
6255   The option `MAT_NO_OFF_PROC_ZERO_ROWS` does not apply to this routine.
6256 
6257 .seealso: [](ch_matrices), `Mat`, `MatZeroRowsIS()`, `MatZeroRows()`, `MatZeroRowsLocalIS()`, `MatZeroRowsStencil()`, `MatZeroEntries()`, `MatZeroRowsLocal()`, `MatSetOption()`,
6258           `MatZeroRowsColumnsLocal()`, `MatZeroRowsColumnsLocalIS()`, `MatZeroRowsColumnsIS()`, `MatZeroRowsColumnsStencil()`
6259 @*/
6260 PetscErrorCode MatZeroRowsColumns(Mat mat, PetscInt numRows, const PetscInt rows[], PetscScalar diag, Vec x, Vec b)
6261 {
6262   PetscFunctionBegin;
6263   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
6264   PetscValidType(mat, 1);
6265   if (numRows) PetscAssertPointer(rows, 3);
6266   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
6267   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
6268   MatCheckPreallocated(mat, 1);
6269 
6270   PetscUseTypeMethod(mat, zerorowscolumns, numRows, rows, diag, x, b);
6271   PetscCall(MatViewFromOptions(mat, NULL, "-mat_view"));
6272   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
6273   PetscFunctionReturn(PETSC_SUCCESS);
6274 }
6275 
6276 /*@
6277   MatZeroRowsColumnsIS - Zeros all entries (except possibly the main diagonal)
6278   of a set of rows and columns of a matrix.
6279 
6280   Collective
6281 
6282   Input Parameters:
6283 + mat  - the matrix
6284 . is   - the rows to zero
6285 . diag - value put in all diagonals of eliminated rows (0.0 will even eliminate diagonal entry)
6286 . x    - optional vector of solutions for zeroed rows (other entries in vector are not used)
6287 - b    - optional vector of right-hand side, that will be adjusted by provided solution
6288 
6289   Level: intermediate
6290 
6291   Note:
6292   See `MatZeroRowsColumns()` for details on how this routine operates.
6293 
6294 .seealso: [](ch_matrices), `Mat`, `MatZeroRowsIS()`, `MatZeroRowsColumns()`, `MatZeroRowsLocalIS()`, `MatZeroRowsStencil()`, `MatZeroEntries()`, `MatZeroRowsLocal()`, `MatSetOption()`,
6295           `MatZeroRowsColumnsLocal()`, `MatZeroRowsColumnsLocalIS()`, `MatZeroRows()`, `MatZeroRowsColumnsStencil()`
6296 @*/
6297 PetscErrorCode MatZeroRowsColumnsIS(Mat mat, IS is, PetscScalar diag, Vec x, Vec b)
6298 {
6299   PetscInt        numRows;
6300   const PetscInt *rows;
6301 
6302   PetscFunctionBegin;
6303   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
6304   PetscValidHeaderSpecific(is, IS_CLASSID, 2);
6305   PetscValidType(mat, 1);
6306   PetscValidType(is, 2);
6307   PetscCall(ISGetLocalSize(is, &numRows));
6308   PetscCall(ISGetIndices(is, &rows));
6309   PetscCall(MatZeroRowsColumns(mat, numRows, rows, diag, x, b));
6310   PetscCall(ISRestoreIndices(is, &rows));
6311   PetscFunctionReturn(PETSC_SUCCESS);
6312 }
6313 
6314 /*@
6315   MatZeroRows - Zeros all entries (except possibly the main diagonal)
6316   of a set of rows of a matrix.
6317 
6318   Collective
6319 
6320   Input Parameters:
6321 + mat     - the matrix
6322 . numRows - the number of rows to zero
6323 . rows    - the global row indices
6324 . diag    - value put in the diagonal of the zeroed rows
6325 . x       - optional vector of solutions for zeroed rows (other entries in vector are not used), these must be set before this call
6326 - b       - optional vector of right-hand side, that will be adjusted by provided solution entries
6327 
6328   Level: intermediate
6329 
6330   Notes:
6331   This routine, along with `MatZeroRowsColumns()`, is typically used to eliminate known Dirichlet boundary conditions from a linear system.
6332 
6333   For each zeroed row, the value of the corresponding `b` is set to `diag` times the value of the corresponding `x`.
6334 
6335   If the resulting linear system is to be solved with `KSP` then one can (but does not have to) call `KSPSetInitialGuessNonzero()` to allow the
6336   Krylov method to take advantage of the known solution on the zeroed rows.
6337 
6338   May be followed by using a `PC` of type `PCREDISTRIBUTE` to solve the reduced problem (`PCDISTRIBUTE` completely eliminates the zeroed rows and their corresponding columns)
6339   from the matrix.
6340 
6341   Unlike `MatZeroRowsColumns()` for the `MATAIJ` and `MATBAIJ` matrix formats this removes the old nonzero structure, from the eliminated rows of the matrix
6342   but does not release memory.  Because of this removal matrix-vector products with the adjusted matrix will be a bit faster. For the dense and block diagonal
6343   formats this does not alter the nonzero structure.
6344 
6345   If the option `MatSetOption`(mat,`MAT_KEEP_NONZERO_PATTERN`,`PETSC_TRUE`) the nonzero structure
6346   of the matrix is not changed the values are
6347   merely zeroed.
6348 
6349   The user can set a value in the diagonal entry (or for the `MATAIJ` format
6350   formats can optionally remove the main diagonal entry from the
6351   nonzero structure as well, by passing 0.0 as the final argument).
6352 
6353   For the parallel case, all processes that share the matrix (i.e.,
6354   those in the communicator used for matrix creation) MUST call this
6355   routine, regardless of whether any rows being zeroed are owned by
6356   them.
6357 
6358   Each processor can indicate any rows in the entire matrix to be zeroed (i.e. each process does NOT have to
6359   list only rows local to itself).
6360 
6361   You can call `MatSetOption`(mat,`MAT_NO_OFF_PROC_ZERO_ROWS`,`PETSC_TRUE`) if each process indicates only rows it
6362   owns that are to be zeroed. This saves a global synchronization in the implementation.
6363 
6364 .seealso: [](ch_matrices), `Mat`, `MatZeroRowsIS()`, `MatZeroRowsColumns()`, `MatZeroRowsLocalIS()`, `MatZeroRowsStencil()`, `MatZeroEntries()`, `MatZeroRowsLocal()`, `MatSetOption()`,
6365           `MatZeroRowsColumnsLocal()`, `MatZeroRowsColumnsLocalIS()`, `MatZeroRowsColumnsIS()`, `MatZeroRowsColumnsStencil()`, `PCREDISTRIBUTE`, `MAT_KEEP_NONZERO_PATTERN`
6366 @*/
6367 PetscErrorCode MatZeroRows(Mat mat, PetscInt numRows, const PetscInt rows[], PetscScalar diag, Vec x, Vec b)
6368 {
6369   PetscFunctionBegin;
6370   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
6371   PetscValidType(mat, 1);
6372   if (numRows) PetscAssertPointer(rows, 3);
6373   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
6374   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
6375   MatCheckPreallocated(mat, 1);
6376 
6377   PetscUseTypeMethod(mat, zerorows, numRows, rows, diag, x, b);
6378   PetscCall(MatViewFromOptions(mat, NULL, "-mat_view"));
6379   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
6380   PetscFunctionReturn(PETSC_SUCCESS);
6381 }
6382 
6383 /*@
6384   MatZeroRowsIS - Zeros all entries (except possibly the main diagonal)
6385   of a set of rows of a matrix.
6386 
6387   Collective
6388 
6389   Input Parameters:
6390 + mat  - the matrix
6391 . is   - index set of rows to remove (if `NULL` then no row is removed)
6392 . diag - value put in all diagonals of eliminated rows
6393 . x    - optional vector of solutions for zeroed rows (other entries in vector are not used)
6394 - b    - optional vector of right-hand side, that will be adjusted by provided solution
6395 
6396   Level: intermediate
6397 
6398   Note:
6399   See `MatZeroRows()` for details on how this routine operates.
6400 
6401 .seealso: [](ch_matrices), `Mat`, `MatZeroRows()`, `MatZeroRowsColumns()`, `MatZeroRowsLocalIS()`, `MatZeroRowsStencil()`, `MatZeroEntries()`, `MatZeroRowsLocal()`, `MatSetOption()`,
6402           `MatZeroRowsColumnsLocal()`, `MatZeroRowsColumnsLocalIS()`, `MatZeroRowsColumnsIS()`, `MatZeroRowsColumnsStencil()`
6403 @*/
6404 PetscErrorCode MatZeroRowsIS(Mat mat, IS is, PetscScalar diag, Vec x, Vec b)
6405 {
6406   PetscInt        numRows = 0;
6407   const PetscInt *rows    = NULL;
6408 
6409   PetscFunctionBegin;
6410   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
6411   PetscValidType(mat, 1);
6412   if (is) {
6413     PetscValidHeaderSpecific(is, IS_CLASSID, 2);
6414     PetscCall(ISGetLocalSize(is, &numRows));
6415     PetscCall(ISGetIndices(is, &rows));
6416   }
6417   PetscCall(MatZeroRows(mat, numRows, rows, diag, x, b));
6418   if (is) PetscCall(ISRestoreIndices(is, &rows));
6419   PetscFunctionReturn(PETSC_SUCCESS);
6420 }
6421 
6422 /*@
6423   MatZeroRowsStencil - Zeros all entries (except possibly the main diagonal)
6424   of a set of rows of a matrix. These rows must be local to the process.
6425 
6426   Collective
6427 
6428   Input Parameters:
6429 + mat     - the matrix
6430 . numRows - the number of rows to remove
6431 . rows    - the grid coordinates (and component number when dof > 1) for matrix rows
6432 . diag    - value put in all diagonals of eliminated rows (0.0 will even eliminate diagonal entry)
6433 . x       - optional vector of solutions for zeroed rows (other entries in vector are not used)
6434 - b       - optional vector of right-hand side, that will be adjusted by provided solution
6435 
6436   Level: intermediate
6437 
6438   Notes:
6439   See `MatZeroRows()` for details on how this routine operates.
6440 
6441   The grid coordinates are across the entire grid, not just the local portion
6442 
6443   For periodic boundary conditions use negative indices for values to the left (below 0; that are to be
6444   obtained by wrapping values from right edge). For values to the right of the last entry using that index plus one
6445   etc to obtain values that obtained by wrapping the values from the left edge. This does not work for anything but the
6446   `DM_BOUNDARY_PERIODIC` boundary type.
6447 
6448   For indices that don't mean anything for your case (like the k index when working in 2d) or the c index when you have
6449   a single value per point) you can skip filling those indices.
6450 
6451   Fortran Note:
6452   `idxm` and `idxn` should be declared as
6453 $     MatStencil idxm(4, m)
6454   and the values inserted using
6455 .vb
6456     idxm(MatStencil_i, 1) = i
6457     idxm(MatStencil_j, 1) = j
6458     idxm(MatStencil_k, 1) = k
6459     idxm(MatStencil_c, 1) = c
6460    etc
6461 .ve
6462 
6463 .seealso: [](ch_matrices), `Mat`, `MatZeroRowsIS()`, `MatZeroRowsColumns()`, `MatZeroRowsLocalIS()`, `MatZeroRows()`, `MatZeroEntries()`, `MatZeroRowsLocal()`, `MatSetOption()`,
6464           `MatZeroRowsColumnsLocal()`, `MatZeroRowsColumnsLocalIS()`, `MatZeroRowsColumnsIS()`, `MatZeroRowsColumnsStencil()`
6465 @*/
6466 PetscErrorCode MatZeroRowsStencil(Mat mat, PetscInt numRows, const MatStencil rows[], PetscScalar diag, Vec x, Vec b)
6467 {
6468   PetscInt  dim    = mat->stencil.dim;
6469   PetscInt  sdim   = dim - (1 - (PetscInt)mat->stencil.noc);
6470   PetscInt *dims   = mat->stencil.dims + 1;
6471   PetscInt *starts = mat->stencil.starts;
6472   PetscInt *dxm    = (PetscInt *)rows;
6473   PetscInt *jdxm, i, j, tmp, numNewRows = 0;
6474 
6475   PetscFunctionBegin;
6476   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
6477   PetscValidType(mat, 1);
6478   if (numRows) PetscAssertPointer(rows, 3);
6479 
6480   PetscCall(PetscMalloc1(numRows, &jdxm));
6481   for (i = 0; i < numRows; ++i) {
6482     /* Skip unused dimensions (they are ordered k, j, i, c) */
6483     for (j = 0; j < 3 - sdim; ++j) dxm++;
6484     /* Local index in X dir */
6485     tmp = *dxm++ - starts[0];
6486     /* Loop over remaining dimensions */
6487     for (j = 0; j < dim - 1; ++j) {
6488       /* If nonlocal, set index to be negative */
6489       if ((*dxm++ - starts[j + 1]) < 0 || tmp < 0) tmp = PETSC_INT_MIN;
6490       /* Update local index */
6491       else tmp = tmp * dims[j] + *(dxm - 1) - starts[j + 1];
6492     }
6493     /* Skip component slot if necessary */
6494     if (mat->stencil.noc) dxm++;
6495     /* Local row number */
6496     if (tmp >= 0) jdxm[numNewRows++] = tmp;
6497   }
6498   PetscCall(MatZeroRowsLocal(mat, numNewRows, jdxm, diag, x, b));
6499   PetscCall(PetscFree(jdxm));
6500   PetscFunctionReturn(PETSC_SUCCESS);
6501 }
6502 
6503 /*@
6504   MatZeroRowsColumnsStencil - Zeros all row and column entries (except possibly the main diagonal)
6505   of a set of rows and columns of a matrix.
6506 
6507   Collective
6508 
6509   Input Parameters:
6510 + mat     - the matrix
6511 . numRows - the number of rows/columns to remove
6512 . rows    - the grid coordinates (and component number when dof > 1) for matrix rows
6513 . diag    - value put in all diagonals of eliminated rows (0.0 will even eliminate diagonal entry)
6514 . x       - optional vector of solutions for zeroed rows (other entries in vector are not used)
6515 - b       - optional vector of right-hand side, that will be adjusted by provided solution
6516 
6517   Level: intermediate
6518 
6519   Notes:
6520   See `MatZeroRowsColumns()` for details on how this routine operates.
6521 
6522   The grid coordinates are across the entire grid, not just the local portion
6523 
6524   For periodic boundary conditions use negative indices for values to the left (below 0; that are to be
6525   obtained by wrapping values from right edge). For values to the right of the last entry using that index plus one
6526   etc to obtain values that obtained by wrapping the values from the left edge. This does not work for anything but the
6527   `DM_BOUNDARY_PERIODIC` boundary type.
6528 
6529   For indices that don't mean anything for your case (like the k index when working in 2d) or the c index when you have
6530   a single value per point) you can skip filling those indices.
6531 
6532   Fortran Note:
6533   `idxm` and `idxn` should be declared as
6534 $     MatStencil idxm(4, m)
6535   and the values inserted using
6536 .vb
6537     idxm(MatStencil_i, 1) = i
6538     idxm(MatStencil_j, 1) = j
6539     idxm(MatStencil_k, 1) = k
6540     idxm(MatStencil_c, 1) = c
6541     etc
6542 .ve
6543 
6544 .seealso: [](ch_matrices), `Mat`, `MatZeroRowsIS()`, `MatZeroRowsColumns()`, `MatZeroRowsLocalIS()`, `MatZeroRowsStencil()`, `MatZeroEntries()`, `MatZeroRowsLocal()`, `MatSetOption()`,
6545           `MatZeroRowsColumnsLocal()`, `MatZeroRowsColumnsLocalIS()`, `MatZeroRowsColumnsIS()`, `MatZeroRows()`
6546 @*/
6547 PetscErrorCode MatZeroRowsColumnsStencil(Mat mat, PetscInt numRows, const MatStencil rows[], PetscScalar diag, Vec x, Vec b)
6548 {
6549   PetscInt  dim    = mat->stencil.dim;
6550   PetscInt  sdim   = dim - (1 - (PetscInt)mat->stencil.noc);
6551   PetscInt *dims   = mat->stencil.dims + 1;
6552   PetscInt *starts = mat->stencil.starts;
6553   PetscInt *dxm    = (PetscInt *)rows;
6554   PetscInt *jdxm, i, j, tmp, numNewRows = 0;
6555 
6556   PetscFunctionBegin;
6557   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
6558   PetscValidType(mat, 1);
6559   if (numRows) PetscAssertPointer(rows, 3);
6560 
6561   PetscCall(PetscMalloc1(numRows, &jdxm));
6562   for (i = 0; i < numRows; ++i) {
6563     /* Skip unused dimensions (they are ordered k, j, i, c) */
6564     for (j = 0; j < 3 - sdim; ++j) dxm++;
6565     /* Local index in X dir */
6566     tmp = *dxm++ - starts[0];
6567     /* Loop over remaining dimensions */
6568     for (j = 0; j < dim - 1; ++j) {
6569       /* If nonlocal, set index to be negative */
6570       if ((*dxm++ - starts[j + 1]) < 0 || tmp < 0) tmp = PETSC_INT_MIN;
6571       /* Update local index */
6572       else tmp = tmp * dims[j] + *(dxm - 1) - starts[j + 1];
6573     }
6574     /* Skip component slot if necessary */
6575     if (mat->stencil.noc) dxm++;
6576     /* Local row number */
6577     if (tmp >= 0) jdxm[numNewRows++] = tmp;
6578   }
6579   PetscCall(MatZeroRowsColumnsLocal(mat, numNewRows, jdxm, diag, x, b));
6580   PetscCall(PetscFree(jdxm));
6581   PetscFunctionReturn(PETSC_SUCCESS);
6582 }
6583 
6584 /*@
6585   MatZeroRowsLocal - Zeros all entries (except possibly the main diagonal)
6586   of a set of rows of a matrix; using local numbering of rows.
6587 
6588   Collective
6589 
6590   Input Parameters:
6591 + mat     - the matrix
6592 . numRows - the number of rows to remove
6593 . rows    - the local row indices
6594 . diag    - value put in all diagonals of eliminated rows
6595 . x       - optional vector of solutions for zeroed rows (other entries in vector are not used)
6596 - b       - optional vector of right-hand side, that will be adjusted by provided solution
6597 
6598   Level: intermediate
6599 
6600   Notes:
6601   Before calling `MatZeroRowsLocal()`, the user must first set the
6602   local-to-global mapping by calling MatSetLocalToGlobalMapping(), this is often already set for matrices obtained with `DMCreateMatrix()`.
6603 
6604   See `MatZeroRows()` for details on how this routine operates.
6605 
6606 .seealso: [](ch_matrices), `Mat`, `MatZeroRowsIS()`, `MatZeroRowsColumns()`, `MatZeroRowsLocalIS()`, `MatZeroRowsStencil()`, `MatZeroEntries()`, `MatZeroRows()`, `MatSetOption()`,
6607           `MatZeroRowsColumnsLocal()`, `MatZeroRowsColumnsLocalIS()`, `MatZeroRowsColumnsIS()`, `MatZeroRowsColumnsStencil()`
6608 @*/
6609 PetscErrorCode MatZeroRowsLocal(Mat mat, PetscInt numRows, const PetscInt rows[], PetscScalar diag, Vec x, Vec b)
6610 {
6611   PetscFunctionBegin;
6612   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
6613   PetscValidType(mat, 1);
6614   if (numRows) PetscAssertPointer(rows, 3);
6615   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
6616   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
6617   MatCheckPreallocated(mat, 1);
6618 
6619   if (mat->ops->zerorowslocal) {
6620     PetscUseTypeMethod(mat, zerorowslocal, numRows, rows, diag, x, b);
6621   } else {
6622     IS              is, newis;
6623     const PetscInt *newRows;
6624 
6625     PetscCheck(mat->rmap->mapping, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Need to provide local to global mapping to matrix first");
6626     PetscCall(ISCreateGeneral(PETSC_COMM_SELF, numRows, rows, PETSC_COPY_VALUES, &is));
6627     PetscCall(ISLocalToGlobalMappingApplyIS(mat->rmap->mapping, is, &newis));
6628     PetscCall(ISGetIndices(newis, &newRows));
6629     PetscUseTypeMethod(mat, zerorows, numRows, newRows, diag, x, b);
6630     PetscCall(ISRestoreIndices(newis, &newRows));
6631     PetscCall(ISDestroy(&newis));
6632     PetscCall(ISDestroy(&is));
6633   }
6634   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
6635   PetscFunctionReturn(PETSC_SUCCESS);
6636 }
6637 
6638 /*@
6639   MatZeroRowsLocalIS - Zeros all entries (except possibly the main diagonal)
6640   of a set of rows of a matrix; using local numbering of rows.
6641 
6642   Collective
6643 
6644   Input Parameters:
6645 + mat  - the matrix
6646 . is   - index set of rows to remove
6647 . diag - value put in all diagonals of eliminated rows
6648 . x    - optional vector of solutions for zeroed rows (other entries in vector are not used)
6649 - b    - optional vector of right-hand side, that will be adjusted by provided solution
6650 
6651   Level: intermediate
6652 
6653   Notes:
6654   Before calling `MatZeroRowsLocalIS()`, the user must first set the
6655   local-to-global mapping by calling `MatSetLocalToGlobalMapping()`, this is often already set for matrices obtained with `DMCreateMatrix()`.
6656 
6657   See `MatZeroRows()` for details on how this routine operates.
6658 
6659 .seealso: [](ch_matrices), `Mat`, `MatZeroRowsIS()`, `MatZeroRowsColumns()`, `MatZeroRows()`, `MatZeroRowsStencil()`, `MatZeroEntries()`, `MatZeroRowsLocal()`, `MatSetOption()`,
6660           `MatZeroRowsColumnsLocal()`, `MatZeroRowsColumnsLocalIS()`, `MatZeroRowsColumnsIS()`, `MatZeroRowsColumnsStencil()`
6661 @*/
6662 PetscErrorCode MatZeroRowsLocalIS(Mat mat, IS is, PetscScalar diag, Vec x, Vec b)
6663 {
6664   PetscInt        numRows;
6665   const PetscInt *rows;
6666 
6667   PetscFunctionBegin;
6668   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
6669   PetscValidType(mat, 1);
6670   PetscValidHeaderSpecific(is, IS_CLASSID, 2);
6671   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
6672   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
6673   MatCheckPreallocated(mat, 1);
6674 
6675   PetscCall(ISGetLocalSize(is, &numRows));
6676   PetscCall(ISGetIndices(is, &rows));
6677   PetscCall(MatZeroRowsLocal(mat, numRows, rows, diag, x, b));
6678   PetscCall(ISRestoreIndices(is, &rows));
6679   PetscFunctionReturn(PETSC_SUCCESS);
6680 }
6681 
6682 /*@
6683   MatZeroRowsColumnsLocal - Zeros all entries (except possibly the main diagonal)
6684   of a set of rows and columns of a matrix; using local numbering of rows.
6685 
6686   Collective
6687 
6688   Input Parameters:
6689 + mat     - the matrix
6690 . numRows - the number of rows to remove
6691 . rows    - the global row indices
6692 . diag    - value put in all diagonals of eliminated rows
6693 . x       - optional vector of solutions for zeroed rows (other entries in vector are not used)
6694 - b       - optional vector of right-hand side, that will be adjusted by provided solution
6695 
6696   Level: intermediate
6697 
6698   Notes:
6699   Before calling `MatZeroRowsColumnsLocal()`, the user must first set the
6700   local-to-global mapping by calling `MatSetLocalToGlobalMapping()`, this is often already set for matrices obtained with `DMCreateMatrix()`.
6701 
6702   See `MatZeroRowsColumns()` for details on how this routine operates.
6703 
6704 .seealso: [](ch_matrices), `Mat`, `MatZeroRowsIS()`, `MatZeroRowsColumns()`, `MatZeroRowsLocalIS()`, `MatZeroRowsStencil()`, `MatZeroEntries()`, `MatZeroRowsLocal()`, `MatSetOption()`,
6705           `MatZeroRows()`, `MatZeroRowsColumnsLocalIS()`, `MatZeroRowsColumnsIS()`, `MatZeroRowsColumnsStencil()`
6706 @*/
6707 PetscErrorCode MatZeroRowsColumnsLocal(Mat mat, PetscInt numRows, const PetscInt rows[], PetscScalar diag, Vec x, Vec b)
6708 {
6709   IS              is, newis;
6710   const PetscInt *newRows;
6711 
6712   PetscFunctionBegin;
6713   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
6714   PetscValidType(mat, 1);
6715   if (numRows) PetscAssertPointer(rows, 3);
6716   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
6717   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
6718   MatCheckPreallocated(mat, 1);
6719 
6720   PetscCheck(mat->cmap->mapping, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Need to provide local to global mapping to matrix first");
6721   PetscCall(ISCreateGeneral(PETSC_COMM_SELF, numRows, rows, PETSC_COPY_VALUES, &is));
6722   PetscCall(ISLocalToGlobalMappingApplyIS(mat->cmap->mapping, is, &newis));
6723   PetscCall(ISGetIndices(newis, &newRows));
6724   PetscUseTypeMethod(mat, zerorowscolumns, numRows, newRows, diag, x, b);
6725   PetscCall(ISRestoreIndices(newis, &newRows));
6726   PetscCall(ISDestroy(&newis));
6727   PetscCall(ISDestroy(&is));
6728   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
6729   PetscFunctionReturn(PETSC_SUCCESS);
6730 }
6731 
6732 /*@
6733   MatZeroRowsColumnsLocalIS - Zeros all entries (except possibly the main diagonal)
6734   of a set of rows and columns of a matrix; using local numbering of rows.
6735 
6736   Collective
6737 
6738   Input Parameters:
6739 + mat  - the matrix
6740 . is   - index set of rows to remove
6741 . diag - value put in all diagonals of eliminated rows
6742 . x    - optional vector of solutions for zeroed rows (other entries in vector are not used)
6743 - b    - optional vector of right-hand side, that will be adjusted by provided solution
6744 
6745   Level: intermediate
6746 
6747   Notes:
6748   Before calling `MatZeroRowsColumnsLocalIS()`, the user must first set the
6749   local-to-global mapping by calling `MatSetLocalToGlobalMapping()`, this is often already set for matrices obtained with `DMCreateMatrix()`.
6750 
6751   See `MatZeroRowsColumns()` for details on how this routine operates.
6752 
6753 .seealso: [](ch_matrices), `Mat`, `MatZeroRowsIS()`, `MatZeroRowsColumns()`, `MatZeroRowsLocalIS()`, `MatZeroRowsStencil()`, `MatZeroEntries()`, `MatZeroRowsLocal()`, `MatSetOption()`,
6754           `MatZeroRowsColumnsLocal()`, `MatZeroRows()`, `MatZeroRowsColumnsIS()`, `MatZeroRowsColumnsStencil()`
6755 @*/
6756 PetscErrorCode MatZeroRowsColumnsLocalIS(Mat mat, IS is, PetscScalar diag, Vec x, Vec b)
6757 {
6758   PetscInt        numRows;
6759   const PetscInt *rows;
6760 
6761   PetscFunctionBegin;
6762   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
6763   PetscValidType(mat, 1);
6764   PetscValidHeaderSpecific(is, IS_CLASSID, 2);
6765   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
6766   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
6767   MatCheckPreallocated(mat, 1);
6768 
6769   PetscCall(ISGetLocalSize(is, &numRows));
6770   PetscCall(ISGetIndices(is, &rows));
6771   PetscCall(MatZeroRowsColumnsLocal(mat, numRows, rows, diag, x, b));
6772   PetscCall(ISRestoreIndices(is, &rows));
6773   PetscFunctionReturn(PETSC_SUCCESS);
6774 }
6775 
6776 /*@
6777   MatGetSize - Returns the numbers of rows and columns in a matrix.
6778 
6779   Not Collective
6780 
6781   Input Parameter:
6782 . mat - the matrix
6783 
6784   Output Parameters:
6785 + m - the number of global rows
6786 - n - the number of global columns
6787 
6788   Level: beginner
6789 
6790   Note:
6791   Both output parameters can be `NULL` on input.
6792 
6793 .seealso: [](ch_matrices), `Mat`, `MatSetSizes()`, `MatGetLocalSize()`
6794 @*/
6795 PetscErrorCode MatGetSize(Mat mat, PetscInt *m, PetscInt *n)
6796 {
6797   PetscFunctionBegin;
6798   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
6799   if (m) *m = mat->rmap->N;
6800   if (n) *n = mat->cmap->N;
6801   PetscFunctionReturn(PETSC_SUCCESS);
6802 }
6803 
6804 /*@
6805   MatGetLocalSize - For most matrix formats, excluding `MATELEMENTAL` and `MATSCALAPACK`, Returns the number of local rows and local columns
6806   of a matrix. For all matrices this is the local size of the left and right vectors as returned by `MatCreateVecs()`.
6807 
6808   Not Collective
6809 
6810   Input Parameter:
6811 . mat - the matrix
6812 
6813   Output Parameters:
6814 + m - the number of local rows, use `NULL` to not obtain this value
6815 - n - the number of local columns, use `NULL` to not obtain this value
6816 
6817   Level: beginner
6818 
6819 .seealso: [](ch_matrices), `Mat`, `MatSetSizes()`, `MatGetSize()`
6820 @*/
6821 PetscErrorCode MatGetLocalSize(Mat mat, PetscInt *m, PetscInt *n)
6822 {
6823   PetscFunctionBegin;
6824   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
6825   if (m) PetscAssertPointer(m, 2);
6826   if (n) PetscAssertPointer(n, 3);
6827   if (m) *m = mat->rmap->n;
6828   if (n) *n = mat->cmap->n;
6829   PetscFunctionReturn(PETSC_SUCCESS);
6830 }
6831 
6832 /*@
6833   MatGetOwnershipRangeColumn - Returns the range of matrix columns associated with rows of a
6834   vector one multiplies this matrix by that are owned by this processor.
6835 
6836   Not Collective, unless matrix has not been allocated, then collective
6837 
6838   Input Parameter:
6839 . mat - the matrix
6840 
6841   Output Parameters:
6842 + m - the global index of the first local column, use `NULL` to not obtain this value
6843 - n - one more than the global index of the last local column, use `NULL` to not obtain this value
6844 
6845   Level: developer
6846 
6847   Notes:
6848   If the `Mat` was obtained from a `DM` with `DMCreateMatrix()`, then the range values are determined by the specific `DM`.
6849 
6850   If the `Mat` was created directly the range values are determined by the local size passed to `MatSetSizes()` or `MatCreateAIJ()`.
6851   If `PETSC_DECIDE` was passed as the local size, then the vector uses default values for the range using `PetscSplitOwnership()`.
6852 
6853   For certain `DM`, such as `DMDA`, it is better to use `DM` specific routines, such as `DMDAGetGhostCorners()`, to determine
6854   the local values in the matrix.
6855 
6856   Returns the columns of the "diagonal block" for most sparse matrix formats. See [Matrix
6857   Layouts](sec_matlayout) for details on matrix layouts.
6858 
6859 .seealso: [](ch_matrices), `Mat`, `MatGetOwnershipRange()`, `MatGetOwnershipRanges()`, `MatGetOwnershipRangesColumn()`, `PetscLayout`,
6860           `MatSetSizes()`, `MatCreateAIJ()`, `DMDAGetGhostCorners()`, `DM`
6861 @*/
6862 PetscErrorCode MatGetOwnershipRangeColumn(Mat mat, PetscInt *m, PetscInt *n)
6863 {
6864   PetscFunctionBegin;
6865   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
6866   PetscValidType(mat, 1);
6867   if (m) PetscAssertPointer(m, 2);
6868   if (n) PetscAssertPointer(n, 3);
6869   MatCheckPreallocated(mat, 1);
6870   if (m) *m = mat->cmap->rstart;
6871   if (n) *n = mat->cmap->rend;
6872   PetscFunctionReturn(PETSC_SUCCESS);
6873 }
6874 
6875 /*@
6876   MatGetOwnershipRange - For matrices that own values by row, excludes `MATELEMENTAL` and `MATSCALAPACK`, returns the range of matrix rows owned by
6877   this MPI process.
6878 
6879   Not Collective
6880 
6881   Input Parameter:
6882 . mat - the matrix
6883 
6884   Output Parameters:
6885 + m - the global index of the first local row, use `NULL` to not obtain this value
6886 - n - one more than the global index of the last local row, use `NULL` to not obtain this value
6887 
6888   Level: beginner
6889 
6890   Notes:
6891   If the `Mat` was obtained from a `DM` with `DMCreateMatrix()`, then the range values are determined by the specific `DM`.
6892 
6893   If the `Mat` was created directly the range values are determined by the local size passed to `MatSetSizes()` or `MatCreateAIJ()`.
6894   If `PETSC_DECIDE` was passed as the local size, then the vector uses default values for the range using `PetscSplitOwnership()`.
6895 
6896   For certain `DM`, such as `DMDA`, it is better to use `DM` specific routines, such as `DMDAGetGhostCorners()`, to determine
6897   the local values in the matrix.
6898 
6899   The high argument is one more than the last element stored locally.
6900 
6901   For all matrices  it returns the range of matrix rows associated with rows of a vector that
6902   would contain the result of a matrix vector product with this matrix. See [Matrix
6903   Layouts](sec_matlayout) for details on matrix layouts.
6904 
6905 .seealso: [](ch_matrices), `Mat`, `MatGetOwnershipRanges()`, `MatGetOwnershipRangeColumn()`, `MatGetOwnershipRangesColumn()`, `PetscSplitOwnership()`,
6906           `PetscSplitOwnershipBlock()`, `PetscLayout`, `MatSetSizes()`, `MatCreateAIJ()`, `DMDAGetGhostCorners()`, `DM`
6907 @*/
6908 PetscErrorCode MatGetOwnershipRange(Mat mat, PetscInt *m, PetscInt *n)
6909 {
6910   PetscFunctionBegin;
6911   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
6912   PetscValidType(mat, 1);
6913   if (m) PetscAssertPointer(m, 2);
6914   if (n) PetscAssertPointer(n, 3);
6915   MatCheckPreallocated(mat, 1);
6916   if (m) *m = mat->rmap->rstart;
6917   if (n) *n = mat->rmap->rend;
6918   PetscFunctionReturn(PETSC_SUCCESS);
6919 }
6920 
6921 /*@C
6922   MatGetOwnershipRanges - For matrices that own values by row, excludes `MATELEMENTAL` and
6923   `MATSCALAPACK`, returns the range of matrix rows owned by each process.
6924 
6925   Not Collective, unless matrix has not been allocated
6926 
6927   Input Parameter:
6928 . mat - the matrix
6929 
6930   Output Parameter:
6931 . ranges - start of each processors portion plus one more than the total length at the end, of length `size` + 1
6932            where `size` is the number of MPI processes used by `mat`
6933 
6934   Level: beginner
6935 
6936   Notes:
6937   If the `Mat` was obtained from a `DM` with `DMCreateMatrix()`, then the range values are determined by the specific `DM`.
6938 
6939   If the `Mat` was created directly the range values are determined by the local size passed to `MatSetSizes()` or `MatCreateAIJ()`.
6940   If `PETSC_DECIDE` was passed as the local size, then the vector uses default values for the range using `PetscSplitOwnership()`.
6941 
6942   For certain `DM`, such as `DMDA`, it is better to use `DM` specific routines, such as `DMDAGetGhostCorners()`, to determine
6943   the local values in the matrix.
6944 
6945   For all matrices  it returns the ranges of matrix rows associated with rows of a vector that
6946   would contain the result of a matrix vector product with this matrix. See [Matrix
6947   Layouts](sec_matlayout) for details on matrix layouts.
6948 
6949 .seealso: [](ch_matrices), `Mat`, `MatGetOwnershipRange()`, `MatGetOwnershipRangeColumn()`, `MatGetOwnershipRangesColumn()`, `PetscLayout`,
6950           `PetscSplitOwnership()`, `PetscSplitOwnershipBlock()`, `MatSetSizes()`, `MatCreateAIJ()`,
6951           `DMDAGetGhostCorners()`, `DM`
6952 @*/
6953 PetscErrorCode MatGetOwnershipRanges(Mat mat, const PetscInt *ranges[])
6954 {
6955   PetscFunctionBegin;
6956   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
6957   PetscValidType(mat, 1);
6958   MatCheckPreallocated(mat, 1);
6959   PetscCall(PetscLayoutGetRanges(mat->rmap, ranges));
6960   PetscFunctionReturn(PETSC_SUCCESS);
6961 }
6962 
6963 /*@C
6964   MatGetOwnershipRangesColumn - Returns the ranges of matrix columns associated with rows of a
6965   vector one multiplies this vector by that are owned by each processor.
6966 
6967   Not Collective, unless matrix has not been allocated
6968 
6969   Input Parameter:
6970 . mat - the matrix
6971 
6972   Output Parameter:
6973 . ranges - start of each processors portion plus one more than the total length at the end
6974 
6975   Level: beginner
6976 
6977   Notes:
6978   If the `Mat` was obtained from a `DM` with `DMCreateMatrix()`, then the range values are determined by the specific `DM`.
6979 
6980   If the `Mat` was created directly the range values are determined by the local size passed to `MatSetSizes()` or `MatCreateAIJ()`.
6981   If `PETSC_DECIDE` was passed as the local size, then the vector uses default values for the range using `PetscSplitOwnership()`.
6982 
6983   For certain `DM`, such as `DMDA`, it is better to use `DM` specific routines, such as `DMDAGetGhostCorners()`, to determine
6984   the local values in the matrix.
6985 
6986   Returns the columns of the "diagonal blocks", for most sparse matrix formats. See [Matrix
6987   Layouts](sec_matlayout) for details on matrix layouts.
6988 
6989 .seealso: [](ch_matrices), `Mat`, `MatGetOwnershipRange()`, `MatGetOwnershipRangeColumn()`, `MatGetOwnershipRanges()`,
6990           `PetscSplitOwnership()`, `PetscSplitOwnershipBlock()`, `PetscLayout`, `MatSetSizes()`, `MatCreateAIJ()`,
6991           `DMDAGetGhostCorners()`, `DM`
6992 @*/
6993 PetscErrorCode MatGetOwnershipRangesColumn(Mat mat, const PetscInt *ranges[])
6994 {
6995   PetscFunctionBegin;
6996   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
6997   PetscValidType(mat, 1);
6998   MatCheckPreallocated(mat, 1);
6999   PetscCall(PetscLayoutGetRanges(mat->cmap, ranges));
7000   PetscFunctionReturn(PETSC_SUCCESS);
7001 }
7002 
7003 /*@
7004   MatGetOwnershipIS - Get row and column ownership of a matrices' values as index sets.
7005 
7006   Not Collective
7007 
7008   Input Parameter:
7009 . A - matrix
7010 
7011   Output Parameters:
7012 + rows - rows in which this process owns elements, , use `NULL` to not obtain this value
7013 - cols - columns in which this process owns elements, use `NULL` to not obtain this value
7014 
7015   Level: intermediate
7016 
7017   Note:
7018   You should call `ISDestroy()` on the returned `IS`
7019 
7020   For most matrices, excluding `MATELEMENTAL` and `MATSCALAPACK`, this corresponds to values
7021   returned by `MatGetOwnershipRange()`, `MatGetOwnershipRangeColumn()`. For `MATELEMENTAL` and
7022   `MATSCALAPACK` the ownership is more complicated. See [Matrix Layouts](sec_matlayout) for
7023   details on matrix layouts.
7024 
7025 .seealso: [](ch_matrices), `IS`, `Mat`, `MatGetOwnershipRanges()`, `MatSetValues()`, `MATELEMENTAL`, `MATSCALAPACK`
7026 @*/
7027 PetscErrorCode MatGetOwnershipIS(Mat A, IS *rows, IS *cols)
7028 {
7029   PetscErrorCode (*f)(Mat, IS *, IS *);
7030 
7031   PetscFunctionBegin;
7032   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
7033   PetscValidType(A, 1);
7034   MatCheckPreallocated(A, 1);
7035   PetscCall(PetscObjectQueryFunction((PetscObject)A, "MatGetOwnershipIS_C", &f));
7036   if (f) {
7037     PetscCall((*f)(A, rows, cols));
7038   } else { /* Create a standard row-based partition, each process is responsible for ALL columns in their row block */
7039     if (rows) PetscCall(ISCreateStride(PETSC_COMM_SELF, A->rmap->n, A->rmap->rstart, 1, rows));
7040     if (cols) PetscCall(ISCreateStride(PETSC_COMM_SELF, A->cmap->N, 0, 1, cols));
7041   }
7042   PetscFunctionReturn(PETSC_SUCCESS);
7043 }
7044 
7045 /*@
7046   MatILUFactorSymbolic - Performs symbolic ILU factorization of a matrix obtained with `MatGetFactor()`
7047   Uses levels of fill only, not drop tolerance. Use `MatLUFactorNumeric()`
7048   to complete the factorization.
7049 
7050   Collective
7051 
7052   Input Parameters:
7053 + fact - the factorized matrix obtained with `MatGetFactor()`
7054 . mat  - the matrix
7055 . row  - row permutation
7056 . col  - column permutation
7057 - info - structure containing
7058 .vb
7059       levels - number of levels of fill.
7060       expected fill - as ratio of original fill.
7061       1 or 0 - indicating force fill on diagonal (improves robustness for matrices
7062                 missing diagonal entries)
7063 .ve
7064 
7065   Level: developer
7066 
7067   Notes:
7068   See [Matrix Factorization](sec_matfactor) for additional information.
7069 
7070   Most users should employ the `KSP` interface for linear solvers
7071   instead of working directly with matrix algebra routines such as this.
7072   See, e.g., `KSPCreate()`.
7073 
7074   Uses the definition of level of fill as in Y. Saad, {cite}`saad2003`
7075 
7076   Developer Note:
7077   The Fortran interface is not autogenerated as the
7078   interface definition cannot be generated correctly [due to `MatFactorInfo`]
7079 
7080 .seealso: [](ch_matrices), `Mat`, [Matrix Factorization](sec_matfactor), `MatGetFactor()`, `MatLUFactorSymbolic()`, `MatLUFactorNumeric()`, `MatCholeskyFactor()`
7081           `MatGetOrdering()`, `MatFactorInfo`
7082 @*/
7083 PetscErrorCode MatILUFactorSymbolic(Mat fact, Mat mat, IS row, IS col, const MatFactorInfo *info)
7084 {
7085   PetscFunctionBegin;
7086   PetscValidHeaderSpecific(mat, MAT_CLASSID, 2);
7087   PetscValidType(mat, 2);
7088   if (row) PetscValidHeaderSpecific(row, IS_CLASSID, 3);
7089   if (col) PetscValidHeaderSpecific(col, IS_CLASSID, 4);
7090   PetscAssertPointer(info, 5);
7091   PetscAssertPointer(fact, 1);
7092   PetscCheck(info->levels >= 0, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_OUTOFRANGE, "Levels of fill negative %" PetscInt_FMT, (PetscInt)info->levels);
7093   PetscCheck(info->fill >= 1.0, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_OUTOFRANGE, "Expected fill less than 1.0 %g", (double)info->fill);
7094   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
7095   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
7096   MatCheckPreallocated(mat, 2);
7097 
7098   if (!fact->trivialsymbolic) PetscCall(PetscLogEventBegin(MAT_ILUFactorSymbolic, mat, row, col, 0));
7099   PetscUseTypeMethod(fact, ilufactorsymbolic, mat, row, col, info);
7100   if (!fact->trivialsymbolic) PetscCall(PetscLogEventEnd(MAT_ILUFactorSymbolic, mat, row, col, 0));
7101   PetscFunctionReturn(PETSC_SUCCESS);
7102 }
7103 
7104 /*@
7105   MatICCFactorSymbolic - Performs symbolic incomplete
7106   Cholesky factorization for a symmetric matrix.  Use
7107   `MatCholeskyFactorNumeric()` to complete the factorization.
7108 
7109   Collective
7110 
7111   Input Parameters:
7112 + fact - the factorized matrix obtained with `MatGetFactor()`
7113 . mat  - the matrix to be factored
7114 . perm - row and column permutation
7115 - info - structure containing
7116 .vb
7117       levels - number of levels of fill.
7118       expected fill - as ratio of original fill.
7119 .ve
7120 
7121   Level: developer
7122 
7123   Notes:
7124   Most users should employ the `KSP` interface for linear solvers
7125   instead of working directly with matrix algebra routines such as this.
7126   See, e.g., `KSPCreate()`.
7127 
7128   This uses the definition of level of fill as in Y. Saad {cite}`saad2003`
7129 
7130   Developer Note:
7131   The Fortran interface is not autogenerated as the
7132   interface definition cannot be generated correctly [due to `MatFactorInfo`]
7133 
7134 .seealso: [](ch_matrices), `Mat`, `MatGetFactor()`, `MatCholeskyFactorNumeric()`, `MatCholeskyFactor()`, `MatFactorInfo`
7135 @*/
7136 PetscErrorCode MatICCFactorSymbolic(Mat fact, Mat mat, IS perm, const MatFactorInfo *info)
7137 {
7138   PetscFunctionBegin;
7139   PetscValidHeaderSpecific(mat, MAT_CLASSID, 2);
7140   PetscValidType(mat, 2);
7141   if (perm) PetscValidHeaderSpecific(perm, IS_CLASSID, 3);
7142   PetscAssertPointer(info, 4);
7143   PetscAssertPointer(fact, 1);
7144   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
7145   PetscCheck(info->levels >= 0, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_OUTOFRANGE, "Levels negative %" PetscInt_FMT, (PetscInt)info->levels);
7146   PetscCheck(info->fill >= 1.0, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_OUTOFRANGE, "Expected fill less than 1.0 %g", (double)info->fill);
7147   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
7148   MatCheckPreallocated(mat, 2);
7149 
7150   if (!fact->trivialsymbolic) PetscCall(PetscLogEventBegin(MAT_ICCFactorSymbolic, mat, perm, 0, 0));
7151   PetscUseTypeMethod(fact, iccfactorsymbolic, mat, perm, info);
7152   if (!fact->trivialsymbolic) PetscCall(PetscLogEventEnd(MAT_ICCFactorSymbolic, mat, perm, 0, 0));
7153   PetscFunctionReturn(PETSC_SUCCESS);
7154 }
7155 
7156 /*@C
7157   MatCreateSubMatrices - Extracts several submatrices from a matrix. If submat
7158   points to an array of valid matrices, they may be reused to store the new
7159   submatrices.
7160 
7161   Collective
7162 
7163   Input Parameters:
7164 + mat   - the matrix
7165 . n     - the number of submatrixes to be extracted (on this processor, may be zero)
7166 . irow  - index set of rows to extract
7167 . icol  - index set of columns to extract
7168 - scall - either `MAT_INITIAL_MATRIX` or `MAT_REUSE_MATRIX`
7169 
7170   Output Parameter:
7171 . submat - the array of submatrices
7172 
7173   Level: advanced
7174 
7175   Notes:
7176   `MatCreateSubMatrices()` can extract ONLY sequential submatrices
7177   (from both sequential and parallel matrices). Use `MatCreateSubMatrix()`
7178   to extract a parallel submatrix.
7179 
7180   Some matrix types place restrictions on the row and column
7181   indices, such as that they be sorted or that they be equal to each other.
7182 
7183   The index sets may not have duplicate entries.
7184 
7185   When extracting submatrices from a parallel matrix, each processor can
7186   form a different submatrix by setting the rows and columns of its
7187   individual index sets according to the local submatrix desired.
7188 
7189   When finished using the submatrices, the user should destroy
7190   them with `MatDestroySubMatrices()`.
7191 
7192   `MAT_REUSE_MATRIX` can only be used when the nonzero structure of the
7193   original matrix has not changed from that last call to `MatCreateSubMatrices()`.
7194 
7195   This routine creates the matrices in submat; you should NOT create them before
7196   calling it. It also allocates the array of matrix pointers submat.
7197 
7198   For `MATBAIJ` matrices the index sets must respect the block structure, that is if they
7199   request one row/column in a block, they must request all rows/columns that are in
7200   that block. For example, if the block size is 2 you cannot request just row 0 and
7201   column 0.
7202 
7203   Fortran Note:
7204   One must pass in as `submat` a `Mat` array of size at least `n`+1.
7205 
7206 .seealso: [](ch_matrices), `Mat`, `MatDestroySubMatrices()`, `MatCreateSubMatrix()`, `MatGetRow()`, `MatGetDiagonal()`, `MatReuse`
7207 @*/
7208 PetscErrorCode MatCreateSubMatrices(Mat mat, PetscInt n, const IS irow[], const IS icol[], MatReuse scall, Mat *submat[])
7209 {
7210   PetscInt  i;
7211   PetscBool eq;
7212 
7213   PetscFunctionBegin;
7214   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
7215   PetscValidType(mat, 1);
7216   if (n) {
7217     PetscAssertPointer(irow, 3);
7218     for (i = 0; i < n; i++) PetscValidHeaderSpecific(irow[i], IS_CLASSID, 3);
7219     PetscAssertPointer(icol, 4);
7220     for (i = 0; i < n; i++) PetscValidHeaderSpecific(icol[i], IS_CLASSID, 4);
7221   }
7222   PetscAssertPointer(submat, 6);
7223   if (n && scall == MAT_REUSE_MATRIX) {
7224     PetscAssertPointer(*submat, 6);
7225     for (i = 0; i < n; i++) PetscValidHeaderSpecific((*submat)[i], MAT_CLASSID, 6);
7226   }
7227   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
7228   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
7229   MatCheckPreallocated(mat, 1);
7230   PetscCall(PetscLogEventBegin(MAT_CreateSubMats, mat, 0, 0, 0));
7231   PetscUseTypeMethod(mat, createsubmatrices, n, irow, icol, scall, submat);
7232   PetscCall(PetscLogEventEnd(MAT_CreateSubMats, mat, 0, 0, 0));
7233   for (i = 0; i < n; i++) {
7234     (*submat)[i]->factortype = MAT_FACTOR_NONE; /* in case in place factorization was previously done on submatrix */
7235     PetscCall(ISEqualUnsorted(irow[i], icol[i], &eq));
7236     if (eq) PetscCall(MatPropagateSymmetryOptions(mat, (*submat)[i]));
7237 #if defined(PETSC_HAVE_VIENNACL) || defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP)
7238     if (mat->boundtocpu && mat->bindingpropagates) {
7239       PetscCall(MatBindToCPU((*submat)[i], PETSC_TRUE));
7240       PetscCall(MatSetBindingPropagates((*submat)[i], PETSC_TRUE));
7241     }
7242 #endif
7243   }
7244   PetscFunctionReturn(PETSC_SUCCESS);
7245 }
7246 
7247 /*@C
7248   MatCreateSubMatricesMPI - Extracts MPI submatrices across a sub communicator of mat (by pairs of `IS` that may live on subcomms).
7249 
7250   Collective
7251 
7252   Input Parameters:
7253 + mat   - the matrix
7254 . n     - the number of submatrixes to be extracted
7255 . irow  - index set of rows to extract
7256 . icol  - index set of columns to extract
7257 - scall - either `MAT_INITIAL_MATRIX` or `MAT_REUSE_MATRIX`
7258 
7259   Output Parameter:
7260 . submat - the array of submatrices
7261 
7262   Level: advanced
7263 
7264   Note:
7265   This is used by `PCGASM`
7266 
7267 .seealso: [](ch_matrices), `Mat`, `PCGASM`, `MatCreateSubMatrices()`, `MatCreateSubMatrix()`, `MatGetRow()`, `MatGetDiagonal()`, `MatReuse`
7268 @*/
7269 PetscErrorCode MatCreateSubMatricesMPI(Mat mat, PetscInt n, const IS irow[], const IS icol[], MatReuse scall, Mat *submat[])
7270 {
7271   PetscInt  i;
7272   PetscBool eq;
7273 
7274   PetscFunctionBegin;
7275   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
7276   PetscValidType(mat, 1);
7277   if (n) {
7278     PetscAssertPointer(irow, 3);
7279     PetscValidHeaderSpecific(*irow, IS_CLASSID, 3);
7280     PetscAssertPointer(icol, 4);
7281     PetscValidHeaderSpecific(*icol, IS_CLASSID, 4);
7282   }
7283   PetscAssertPointer(submat, 6);
7284   if (n && scall == MAT_REUSE_MATRIX) {
7285     PetscAssertPointer(*submat, 6);
7286     PetscValidHeaderSpecific(**submat, MAT_CLASSID, 6);
7287   }
7288   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
7289   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
7290   MatCheckPreallocated(mat, 1);
7291 
7292   PetscCall(PetscLogEventBegin(MAT_CreateSubMats, mat, 0, 0, 0));
7293   PetscUseTypeMethod(mat, createsubmatricesmpi, n, irow, icol, scall, submat);
7294   PetscCall(PetscLogEventEnd(MAT_CreateSubMats, mat, 0, 0, 0));
7295   for (i = 0; i < n; i++) {
7296     PetscCall(ISEqualUnsorted(irow[i], icol[i], &eq));
7297     if (eq) PetscCall(MatPropagateSymmetryOptions(mat, (*submat)[i]));
7298   }
7299   PetscFunctionReturn(PETSC_SUCCESS);
7300 }
7301 
7302 /*@C
7303   MatDestroyMatrices - Destroys an array of matrices.
7304 
7305   Collective
7306 
7307   Input Parameters:
7308 + n   - the number of local matrices
7309 - mat - the matrices (this is a pointer to the array of matrices)
7310 
7311   Level: advanced
7312 
7313   Notes:
7314   Frees not only the matrices, but also the array that contains the matrices
7315 
7316   For matrices obtained with  `MatCreateSubMatrices()` use `MatDestroySubMatrices()`
7317 
7318   Fortran Note:
7319   Does not free the `mat` array.
7320 
7321 .seealso: [](ch_matrices), `Mat`, `MatCreateSubMatrices()`, `MatDestroySubMatrices()`
7322 @*/
7323 PetscErrorCode MatDestroyMatrices(PetscInt n, Mat *mat[])
7324 {
7325   PetscInt i;
7326 
7327   PetscFunctionBegin;
7328   if (!*mat) PetscFunctionReturn(PETSC_SUCCESS);
7329   PetscCheck(n >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Trying to destroy negative number of matrices %" PetscInt_FMT, n);
7330   PetscAssertPointer(mat, 2);
7331 
7332   for (i = 0; i < n; i++) PetscCall(MatDestroy(&(*mat)[i]));
7333 
7334   /* memory is allocated even if n = 0 */
7335   PetscCall(PetscFree(*mat));
7336   PetscFunctionReturn(PETSC_SUCCESS);
7337 }
7338 
7339 /*@C
7340   MatDestroySubMatrices - Destroys a set of matrices obtained with `MatCreateSubMatrices()`.
7341 
7342   Collective
7343 
7344   Input Parameters:
7345 + n   - the number of local matrices
7346 - mat - the matrices (this is a pointer to the array of matrices, just to match the calling
7347                        sequence of `MatCreateSubMatrices()`)
7348 
7349   Level: advanced
7350 
7351   Note:
7352   Frees not only the matrices, but also the array that contains the matrices
7353 
7354   Fortran Note:
7355   Does not free the `mat` array.
7356 
7357 .seealso: [](ch_matrices), `Mat`, `MatCreateSubMatrices()`, `MatDestroyMatrices()`
7358 @*/
7359 PetscErrorCode MatDestroySubMatrices(PetscInt n, Mat *mat[])
7360 {
7361   Mat mat0;
7362 
7363   PetscFunctionBegin;
7364   if (!*mat) PetscFunctionReturn(PETSC_SUCCESS);
7365   /* mat[] is an array of length n+1, see MatCreateSubMatrices_xxx() */
7366   PetscCheck(n >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Trying to destroy negative number of matrices %" PetscInt_FMT, n);
7367   PetscAssertPointer(mat, 2);
7368 
7369   mat0 = (*mat)[0];
7370   if (mat0 && mat0->ops->destroysubmatrices) {
7371     PetscCall((*mat0->ops->destroysubmatrices)(n, mat));
7372   } else {
7373     PetscCall(MatDestroyMatrices(n, mat));
7374   }
7375   PetscFunctionReturn(PETSC_SUCCESS);
7376 }
7377 
7378 /*@
7379   MatGetSeqNonzeroStructure - Extracts the nonzero structure from a matrix and stores it, in its entirety, on each process
7380 
7381   Collective
7382 
7383   Input Parameter:
7384 . mat - the matrix
7385 
7386   Output Parameter:
7387 . matstruct - the sequential matrix with the nonzero structure of `mat`
7388 
7389   Level: developer
7390 
7391 .seealso: [](ch_matrices), `Mat`, `MatDestroySeqNonzeroStructure()`, `MatCreateSubMatrices()`, `MatDestroyMatrices()`
7392 @*/
7393 PetscErrorCode MatGetSeqNonzeroStructure(Mat mat, Mat *matstruct)
7394 {
7395   PetscFunctionBegin;
7396   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
7397   PetscAssertPointer(matstruct, 2);
7398 
7399   PetscValidType(mat, 1);
7400   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
7401   MatCheckPreallocated(mat, 1);
7402 
7403   PetscCall(PetscLogEventBegin(MAT_GetSeqNonzeroStructure, mat, 0, 0, 0));
7404   PetscUseTypeMethod(mat, getseqnonzerostructure, matstruct);
7405   PetscCall(PetscLogEventEnd(MAT_GetSeqNonzeroStructure, mat, 0, 0, 0));
7406   PetscFunctionReturn(PETSC_SUCCESS);
7407 }
7408 
7409 /*@C
7410   MatDestroySeqNonzeroStructure - Destroys matrix obtained with `MatGetSeqNonzeroStructure()`.
7411 
7412   Collective
7413 
7414   Input Parameter:
7415 . mat - the matrix
7416 
7417   Level: advanced
7418 
7419   Note:
7420   This is not needed, one can just call `MatDestroy()`
7421 
7422 .seealso: [](ch_matrices), `Mat`, `MatGetSeqNonzeroStructure()`
7423 @*/
7424 PetscErrorCode MatDestroySeqNonzeroStructure(Mat *mat)
7425 {
7426   PetscFunctionBegin;
7427   PetscAssertPointer(mat, 1);
7428   PetscCall(MatDestroy(mat));
7429   PetscFunctionReturn(PETSC_SUCCESS);
7430 }
7431 
7432 /*@
7433   MatIncreaseOverlap - Given a set of submatrices indicated by index sets,
7434   replaces the index sets by larger ones that represent submatrices with
7435   additional overlap.
7436 
7437   Collective
7438 
7439   Input Parameters:
7440 + mat - the matrix
7441 . n   - the number of index sets
7442 . is  - the array of index sets (these index sets will changed during the call)
7443 - ov  - the additional overlap requested
7444 
7445   Options Database Key:
7446 . -mat_increase_overlap_scalable - use a scalable algorithm to compute the overlap (supported by MPIAIJ matrix)
7447 
7448   Level: developer
7449 
7450   Note:
7451   The computed overlap preserves the matrix block sizes when the blocks are square.
7452   That is: if a matrix nonzero for a given block would increase the overlap all columns associated with
7453   that block are included in the overlap regardless of whether each specific column would increase the overlap.
7454 
7455 .seealso: [](ch_matrices), `Mat`, `PCASM`, `MatSetBlockSize()`, `MatIncreaseOverlapSplit()`, `MatCreateSubMatrices()`
7456 @*/
7457 PetscErrorCode MatIncreaseOverlap(Mat mat, PetscInt n, IS is[], PetscInt ov)
7458 {
7459   PetscInt i, bs, cbs;
7460 
7461   PetscFunctionBegin;
7462   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
7463   PetscValidType(mat, 1);
7464   PetscValidLogicalCollectiveInt(mat, n, 2);
7465   PetscCheck(n >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Must have one or more domains, you have %" PetscInt_FMT, n);
7466   if (n) {
7467     PetscAssertPointer(is, 3);
7468     for (i = 0; i < n; i++) PetscValidHeaderSpecific(is[i], IS_CLASSID, 3);
7469   }
7470   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
7471   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
7472   MatCheckPreallocated(mat, 1);
7473 
7474   if (!ov || !n) PetscFunctionReturn(PETSC_SUCCESS);
7475   PetscCall(PetscLogEventBegin(MAT_IncreaseOverlap, mat, 0, 0, 0));
7476   PetscUseTypeMethod(mat, increaseoverlap, n, is, ov);
7477   PetscCall(PetscLogEventEnd(MAT_IncreaseOverlap, mat, 0, 0, 0));
7478   PetscCall(MatGetBlockSizes(mat, &bs, &cbs));
7479   if (bs == cbs) {
7480     for (i = 0; i < n; i++) PetscCall(ISSetBlockSize(is[i], bs));
7481   }
7482   PetscFunctionReturn(PETSC_SUCCESS);
7483 }
7484 
7485 PetscErrorCode MatIncreaseOverlapSplit_Single(Mat, IS *, PetscInt);
7486 
7487 /*@
7488   MatIncreaseOverlapSplit - Given a set of submatrices indicated by index sets across
7489   a sub communicator, replaces the index sets by larger ones that represent submatrices with
7490   additional overlap.
7491 
7492   Collective
7493 
7494   Input Parameters:
7495 + mat - the matrix
7496 . n   - the number of index sets
7497 . is  - the array of index sets (these index sets will changed during the call)
7498 - ov  - the additional overlap requested
7499 
7500   `   Options Database Key:
7501 . -mat_increase_overlap_scalable - use a scalable algorithm to compute the overlap (supported by MPIAIJ matrix)
7502 
7503   Level: developer
7504 
7505 .seealso: [](ch_matrices), `Mat`, `MatCreateSubMatrices()`, `MatIncreaseOverlap()`
7506 @*/
7507 PetscErrorCode MatIncreaseOverlapSplit(Mat mat, PetscInt n, IS is[], PetscInt ov)
7508 {
7509   PetscInt i;
7510 
7511   PetscFunctionBegin;
7512   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
7513   PetscValidType(mat, 1);
7514   PetscCheck(n >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Must have one or more domains, you have %" PetscInt_FMT, n);
7515   if (n) {
7516     PetscAssertPointer(is, 3);
7517     PetscValidHeaderSpecific(*is, IS_CLASSID, 3);
7518   }
7519   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
7520   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
7521   MatCheckPreallocated(mat, 1);
7522   if (!ov) PetscFunctionReturn(PETSC_SUCCESS);
7523   PetscCall(PetscLogEventBegin(MAT_IncreaseOverlap, mat, 0, 0, 0));
7524   for (i = 0; i < n; i++) PetscCall(MatIncreaseOverlapSplit_Single(mat, &is[i], ov));
7525   PetscCall(PetscLogEventEnd(MAT_IncreaseOverlap, mat, 0, 0, 0));
7526   PetscFunctionReturn(PETSC_SUCCESS);
7527 }
7528 
7529 /*@
7530   MatGetBlockSize - Returns the matrix block size.
7531 
7532   Not Collective
7533 
7534   Input Parameter:
7535 . mat - the matrix
7536 
7537   Output Parameter:
7538 . bs - block size
7539 
7540   Level: intermediate
7541 
7542   Notes:
7543   Block row formats are `MATBAIJ` and `MATSBAIJ` ALWAYS have square block storage in the matrix.
7544 
7545   If the block size has not been set yet this routine returns 1.
7546 
7547 .seealso: [](ch_matrices), `Mat`, `MATBAIJ`, `MATSBAIJ`, `MatCreateSeqBAIJ()`, `MatCreateBAIJ()`, `MatGetBlockSizes()`
7548 @*/
7549 PetscErrorCode MatGetBlockSize(Mat mat, PetscInt *bs)
7550 {
7551   PetscFunctionBegin;
7552   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
7553   PetscAssertPointer(bs, 2);
7554   *bs = PetscAbs(mat->rmap->bs);
7555   PetscFunctionReturn(PETSC_SUCCESS);
7556 }
7557 
7558 /*@
7559   MatGetBlockSizes - Returns the matrix block row and column sizes.
7560 
7561   Not Collective
7562 
7563   Input Parameter:
7564 . mat - the matrix
7565 
7566   Output Parameters:
7567 + rbs - row block size
7568 - cbs - column block size
7569 
7570   Level: intermediate
7571 
7572   Notes:
7573   Block row formats are `MATBAIJ` and `MATSBAIJ` ALWAYS have square block storage in the matrix.
7574   If you pass a different block size for the columns than the rows, the row block size determines the square block storage.
7575 
7576   If a block size has not been set yet this routine returns 1.
7577 
7578 .seealso: [](ch_matrices), `Mat`, `MATBAIJ`, `MATSBAIJ`, `MatCreateSeqBAIJ()`, `MatCreateBAIJ()`, `MatGetBlockSize()`, `MatSetBlockSize()`, `MatSetBlockSizes()`
7579 @*/
7580 PetscErrorCode MatGetBlockSizes(Mat mat, PetscInt *rbs, PetscInt *cbs)
7581 {
7582   PetscFunctionBegin;
7583   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
7584   if (rbs) PetscAssertPointer(rbs, 2);
7585   if (cbs) PetscAssertPointer(cbs, 3);
7586   if (rbs) *rbs = PetscAbs(mat->rmap->bs);
7587   if (cbs) *cbs = PetscAbs(mat->cmap->bs);
7588   PetscFunctionReturn(PETSC_SUCCESS);
7589 }
7590 
7591 /*@
7592   MatSetBlockSize - Sets the matrix block size.
7593 
7594   Logically Collective
7595 
7596   Input Parameters:
7597 + mat - the matrix
7598 - bs  - block size
7599 
7600   Level: intermediate
7601 
7602   Notes:
7603   Block row formats are `MATBAIJ` and `MATSBAIJ` formats ALWAYS have square block storage in the matrix.
7604   This must be called before `MatSetUp()` or MatXXXSetPreallocation() (or will default to 1) and the block size cannot be changed later.
7605 
7606   For `MATAIJ` matrix format, this function can be called at a later stage, provided that the specified block size
7607   is compatible with the matrix local sizes.
7608 
7609 .seealso: [](ch_matrices), `Mat`, `MATBAIJ`, `MATSBAIJ`, `MATAIJ`, `MatCreateSeqBAIJ()`, `MatCreateBAIJ()`, `MatGetBlockSize()`, `MatSetBlockSizes()`, `MatGetBlockSizes()`
7610 @*/
7611 PetscErrorCode MatSetBlockSize(Mat mat, PetscInt bs)
7612 {
7613   PetscFunctionBegin;
7614   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
7615   PetscValidLogicalCollectiveInt(mat, bs, 2);
7616   PetscCall(MatSetBlockSizes(mat, bs, bs));
7617   PetscFunctionReturn(PETSC_SUCCESS);
7618 }
7619 
7620 typedef struct {
7621   PetscInt         n;
7622   IS              *is;
7623   Mat             *mat;
7624   PetscObjectState nonzerostate;
7625   Mat              C;
7626 } EnvelopeData;
7627 
7628 static PetscErrorCode EnvelopeDataDestroy(void *ptr)
7629 {
7630   EnvelopeData *edata = (EnvelopeData *)ptr;
7631 
7632   PetscFunctionBegin;
7633   for (PetscInt i = 0; i < edata->n; i++) PetscCall(ISDestroy(&edata->is[i]));
7634   PetscCall(PetscFree(edata->is));
7635   PetscCall(PetscFree(edata));
7636   PetscFunctionReturn(PETSC_SUCCESS);
7637 }
7638 
7639 /*@
7640   MatComputeVariableBlockEnvelope - Given a matrix whose nonzeros are in blocks along the diagonal this computes and stores
7641   the sizes of these blocks in the matrix. An individual block may lie over several processes.
7642 
7643   Collective
7644 
7645   Input Parameter:
7646 . mat - the matrix
7647 
7648   Level: intermediate
7649 
7650   Notes:
7651   There can be zeros within the blocks
7652 
7653   The blocks can overlap between processes, including laying on more than two processes
7654 
7655 .seealso: [](ch_matrices), `Mat`, `MatInvertVariableBlockEnvelope()`, `MatSetVariableBlockSizes()`
7656 @*/
7657 PetscErrorCode MatComputeVariableBlockEnvelope(Mat mat)
7658 {
7659   PetscInt           n, *sizes, *starts, i = 0, env = 0, tbs = 0, lblocks = 0, rstart, II, ln = 0, cnt = 0, cstart, cend;
7660   PetscInt          *diag, *odiag, sc;
7661   VecScatter         scatter;
7662   PetscScalar       *seqv;
7663   const PetscScalar *parv;
7664   const PetscInt    *ia, *ja;
7665   PetscBool          set, flag, done;
7666   Mat                AA = mat, A;
7667   MPI_Comm           comm;
7668   PetscMPIInt        rank, size, tag;
7669   MPI_Status         status;
7670   PetscContainer     container;
7671   EnvelopeData      *edata;
7672   Vec                seq, par;
7673   IS                 isglobal;
7674 
7675   PetscFunctionBegin;
7676   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
7677   PetscCall(MatIsSymmetricKnown(mat, &set, &flag));
7678   if (!set || !flag) {
7679     /* TODO: only needs nonzero structure of transpose */
7680     PetscCall(MatTranspose(mat, MAT_INITIAL_MATRIX, &AA));
7681     PetscCall(MatAXPY(AA, 1.0, mat, DIFFERENT_NONZERO_PATTERN));
7682   }
7683   PetscCall(MatAIJGetLocalMat(AA, &A));
7684   PetscCall(MatGetRowIJ(A, 0, PETSC_FALSE, PETSC_FALSE, &n, &ia, &ja, &done));
7685   PetscCheck(done, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Unable to get IJ structure from matrix");
7686 
7687   PetscCall(MatGetLocalSize(mat, &n, NULL));
7688   PetscCall(PetscObjectGetNewTag((PetscObject)mat, &tag));
7689   PetscCall(PetscObjectGetComm((PetscObject)mat, &comm));
7690   PetscCallMPI(MPI_Comm_size(comm, &size));
7691   PetscCallMPI(MPI_Comm_rank(comm, &rank));
7692 
7693   PetscCall(PetscMalloc2(n, &sizes, n, &starts));
7694 
7695   if (rank > 0) {
7696     PetscCallMPI(MPI_Recv(&env, 1, MPIU_INT, rank - 1, tag, comm, &status));
7697     PetscCallMPI(MPI_Recv(&tbs, 1, MPIU_INT, rank - 1, tag, comm, &status));
7698   }
7699   PetscCall(MatGetOwnershipRange(mat, &rstart, NULL));
7700   for (i = 0; i < n; i++) {
7701     env = PetscMax(env, ja[ia[i + 1] - 1]);
7702     II  = rstart + i;
7703     if (env == II) {
7704       starts[lblocks]  = tbs;
7705       sizes[lblocks++] = 1 + II - tbs;
7706       tbs              = 1 + II;
7707     }
7708   }
7709   if (rank < size - 1) {
7710     PetscCallMPI(MPI_Send(&env, 1, MPIU_INT, rank + 1, tag, comm));
7711     PetscCallMPI(MPI_Send(&tbs, 1, MPIU_INT, rank + 1, tag, comm));
7712   }
7713 
7714   PetscCall(MatRestoreRowIJ(A, 0, PETSC_FALSE, PETSC_FALSE, &n, &ia, &ja, &done));
7715   if (!set || !flag) PetscCall(MatDestroy(&AA));
7716   PetscCall(MatDestroy(&A));
7717 
7718   PetscCall(PetscNew(&edata));
7719   PetscCall(MatGetNonzeroState(mat, &edata->nonzerostate));
7720   edata->n = lblocks;
7721   /* create IS needed for extracting blocks from the original matrix */
7722   PetscCall(PetscMalloc1(lblocks, &edata->is));
7723   for (PetscInt i = 0; i < lblocks; i++) PetscCall(ISCreateStride(PETSC_COMM_SELF, sizes[i], starts[i], 1, &edata->is[i]));
7724 
7725   /* Create the resulting inverse matrix structure with preallocation information */
7726   PetscCall(MatCreate(PetscObjectComm((PetscObject)mat), &edata->C));
7727   PetscCall(MatSetSizes(edata->C, mat->rmap->n, mat->cmap->n, mat->rmap->N, mat->cmap->N));
7728   PetscCall(MatSetBlockSizesFromMats(edata->C, mat, mat));
7729   PetscCall(MatSetType(edata->C, MATAIJ));
7730 
7731   /* Communicate the start and end of each row, from each block to the correct rank */
7732   /* TODO: Use PetscSF instead of VecScatter */
7733   for (PetscInt i = 0; i < lblocks; i++) ln += sizes[i];
7734   PetscCall(VecCreateSeq(PETSC_COMM_SELF, 2 * ln, &seq));
7735   PetscCall(VecGetArrayWrite(seq, &seqv));
7736   for (PetscInt i = 0; i < lblocks; i++) {
7737     for (PetscInt j = 0; j < sizes[i]; j++) {
7738       seqv[cnt]     = starts[i];
7739       seqv[cnt + 1] = starts[i] + sizes[i];
7740       cnt += 2;
7741     }
7742   }
7743   PetscCall(VecRestoreArrayWrite(seq, &seqv));
7744   PetscCallMPI(MPI_Scan(&cnt, &sc, 1, MPIU_INT, MPI_SUM, PetscObjectComm((PetscObject)mat)));
7745   sc -= cnt;
7746   PetscCall(VecCreateMPI(PetscObjectComm((PetscObject)mat), 2 * mat->rmap->n, 2 * mat->rmap->N, &par));
7747   PetscCall(ISCreateStride(PETSC_COMM_SELF, cnt, sc, 1, &isglobal));
7748   PetscCall(VecScatterCreate(seq, NULL, par, isglobal, &scatter));
7749   PetscCall(ISDestroy(&isglobal));
7750   PetscCall(VecScatterBegin(scatter, seq, par, INSERT_VALUES, SCATTER_FORWARD));
7751   PetscCall(VecScatterEnd(scatter, seq, par, INSERT_VALUES, SCATTER_FORWARD));
7752   PetscCall(VecScatterDestroy(&scatter));
7753   PetscCall(VecDestroy(&seq));
7754   PetscCall(MatGetOwnershipRangeColumn(mat, &cstart, &cend));
7755   PetscCall(PetscMalloc2(mat->rmap->n, &diag, mat->rmap->n, &odiag));
7756   PetscCall(VecGetArrayRead(par, &parv));
7757   cnt = 0;
7758   PetscCall(MatGetSize(mat, NULL, &n));
7759   for (PetscInt i = 0; i < mat->rmap->n; i++) {
7760     PetscInt start, end, d = 0, od = 0;
7761 
7762     start = (PetscInt)PetscRealPart(parv[cnt]);
7763     end   = (PetscInt)PetscRealPart(parv[cnt + 1]);
7764     cnt += 2;
7765 
7766     if (start < cstart) {
7767       od += cstart - start + n - cend;
7768       d += cend - cstart;
7769     } else if (start < cend) {
7770       od += n - cend;
7771       d += cend - start;
7772     } else od += n - start;
7773     if (end <= cstart) {
7774       od -= cstart - end + n - cend;
7775       d -= cend - cstart;
7776     } else if (end < cend) {
7777       od -= n - cend;
7778       d -= cend - end;
7779     } else od -= n - end;
7780 
7781     odiag[i] = od;
7782     diag[i]  = d;
7783   }
7784   PetscCall(VecRestoreArrayRead(par, &parv));
7785   PetscCall(VecDestroy(&par));
7786   PetscCall(MatXAIJSetPreallocation(edata->C, mat->rmap->bs, diag, odiag, NULL, NULL));
7787   PetscCall(PetscFree2(diag, odiag));
7788   PetscCall(PetscFree2(sizes, starts));
7789 
7790   PetscCall(PetscContainerCreate(PETSC_COMM_SELF, &container));
7791   PetscCall(PetscContainerSetPointer(container, edata));
7792   PetscCall(PetscContainerSetUserDestroy(container, (PetscErrorCode (*)(void *))EnvelopeDataDestroy));
7793   PetscCall(PetscObjectCompose((PetscObject)mat, "EnvelopeData", (PetscObject)container));
7794   PetscCall(PetscObjectDereference((PetscObject)container));
7795   PetscFunctionReturn(PETSC_SUCCESS);
7796 }
7797 
7798 /*@
7799   MatInvertVariableBlockEnvelope - set matrix C to be the inverted block diagonal of matrix A
7800 
7801   Collective
7802 
7803   Input Parameters:
7804 + A     - the matrix
7805 - reuse - indicates if the `C` matrix was obtained from a previous call to this routine
7806 
7807   Output Parameter:
7808 . C - matrix with inverted block diagonal of `A`
7809 
7810   Level: advanced
7811 
7812   Note:
7813   For efficiency the matrix `A` should have all the nonzero entries clustered in smallish blocks along the diagonal.
7814 
7815 .seealso: [](ch_matrices), `Mat`, `MatInvertBlockDiagonal()`, `MatComputeBlockDiagonal()`
7816 @*/
7817 PetscErrorCode MatInvertVariableBlockEnvelope(Mat A, MatReuse reuse, Mat *C)
7818 {
7819   PetscContainer   container;
7820   EnvelopeData    *edata;
7821   PetscObjectState nonzerostate;
7822 
7823   PetscFunctionBegin;
7824   PetscCall(PetscObjectQuery((PetscObject)A, "EnvelopeData", (PetscObject *)&container));
7825   if (!container) {
7826     PetscCall(MatComputeVariableBlockEnvelope(A));
7827     PetscCall(PetscObjectQuery((PetscObject)A, "EnvelopeData", (PetscObject *)&container));
7828   }
7829   PetscCall(PetscContainerGetPointer(container, (void **)&edata));
7830   PetscCall(MatGetNonzeroState(A, &nonzerostate));
7831   PetscCheck(nonzerostate <= edata->nonzerostate, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Cannot handle changes to matrix nonzero structure");
7832   PetscCheck(reuse != MAT_REUSE_MATRIX || *C == edata->C, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "C matrix must be the same as previously output");
7833 
7834   PetscCall(MatCreateSubMatrices(A, edata->n, edata->is, edata->is, MAT_INITIAL_MATRIX, &edata->mat));
7835   *C = edata->C;
7836 
7837   for (PetscInt i = 0; i < edata->n; i++) {
7838     Mat          D;
7839     PetscScalar *dvalues;
7840 
7841     PetscCall(MatConvert(edata->mat[i], MATSEQDENSE, MAT_INITIAL_MATRIX, &D));
7842     PetscCall(MatSetOption(*C, MAT_ROW_ORIENTED, PETSC_FALSE));
7843     PetscCall(MatSeqDenseInvert(D));
7844     PetscCall(MatDenseGetArray(D, &dvalues));
7845     PetscCall(MatSetValuesIS(*C, edata->is[i], edata->is[i], dvalues, INSERT_VALUES));
7846     PetscCall(MatDestroy(&D));
7847   }
7848   PetscCall(MatDestroySubMatrices(edata->n, &edata->mat));
7849   PetscCall(MatAssemblyBegin(*C, MAT_FINAL_ASSEMBLY));
7850   PetscCall(MatAssemblyEnd(*C, MAT_FINAL_ASSEMBLY));
7851   PetscFunctionReturn(PETSC_SUCCESS);
7852 }
7853 
7854 /*@
7855   MatSetVariableBlockSizes - Sets diagonal point-blocks of the matrix that need not be of the same size
7856 
7857   Not Collective
7858 
7859   Input Parameters:
7860 + mat     - the matrix
7861 . nblocks - the number of blocks on this process, each block can only exist on a single process
7862 - bsizes  - the block sizes
7863 
7864   Level: intermediate
7865 
7866   Notes:
7867   Currently used by `PCVPBJACOBI` for `MATAIJ` matrices
7868 
7869   Each variable point-block set of degrees of freedom must live on a single MPI process. That is a point block cannot straddle two MPI processes.
7870 
7871 .seealso: [](ch_matrices), `Mat`, `MatCreateSeqBAIJ()`, `MatCreateBAIJ()`, `MatGetBlockSize()`, `MatSetBlockSizes()`, `MatGetBlockSizes()`, `MatGetVariableBlockSizes()`,
7872           `MatComputeVariableBlockEnvelope()`, `PCVPBJACOBI`
7873 @*/
7874 PetscErrorCode MatSetVariableBlockSizes(Mat mat, PetscInt nblocks, const PetscInt bsizes[])
7875 {
7876   PetscInt ncnt = 0, nlocal;
7877 
7878   PetscFunctionBegin;
7879   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
7880   PetscCall(MatGetLocalSize(mat, &nlocal, NULL));
7881   PetscCheck(nblocks >= 0 && nblocks <= nlocal, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Number of local blocks %" PetscInt_FMT " is not in [0, %" PetscInt_FMT "]", nblocks, nlocal);
7882   for (PetscInt i = 0; i < nblocks; i++) ncnt += bsizes[i];
7883   PetscCheck(ncnt == nlocal, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Sum of local block sizes %" PetscInt_FMT " does not equal local size of matrix %" PetscInt_FMT, ncnt, nlocal);
7884   PetscCall(PetscFree(mat->bsizes));
7885   mat->nblocks = nblocks;
7886   PetscCall(PetscMalloc1(nblocks, &mat->bsizes));
7887   PetscCall(PetscArraycpy(mat->bsizes, bsizes, nblocks));
7888   PetscFunctionReturn(PETSC_SUCCESS);
7889 }
7890 
7891 /*@C
7892   MatGetVariableBlockSizes - Gets a diagonal blocks of the matrix that need not be of the same size
7893 
7894   Not Collective; No Fortran Support
7895 
7896   Input Parameter:
7897 . mat - the matrix
7898 
7899   Output Parameters:
7900 + nblocks - the number of blocks on this process
7901 - bsizes  - the block sizes
7902 
7903   Level: intermediate
7904 
7905 .seealso: [](ch_matrices), `Mat`, `MatCreateSeqBAIJ()`, `MatCreateBAIJ()`, `MatGetBlockSize()`, `MatSetBlockSizes()`, `MatGetBlockSizes()`, `MatSetVariableBlockSizes()`, `MatComputeVariableBlockEnvelope()`
7906 @*/
7907 PetscErrorCode MatGetVariableBlockSizes(Mat mat, PetscInt *nblocks, const PetscInt *bsizes[])
7908 {
7909   PetscFunctionBegin;
7910   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
7911   if (nblocks) *nblocks = mat->nblocks;
7912   if (bsizes) *bsizes = mat->bsizes;
7913   PetscFunctionReturn(PETSC_SUCCESS);
7914 }
7915 
7916 /*@
7917   MatSetBlockSizes - Sets the matrix block row and column sizes.
7918 
7919   Logically Collective
7920 
7921   Input Parameters:
7922 + mat - the matrix
7923 . rbs - row block size
7924 - cbs - column block size
7925 
7926   Level: intermediate
7927 
7928   Notes:
7929   Block row formats are `MATBAIJ` and  `MATSBAIJ`. These formats ALWAYS have square block storage in the matrix.
7930   If you pass a different block size for the columns than the rows, the row block size determines the square block storage.
7931   This must be called before `MatSetUp()` or MatXXXSetPreallocation() (or will default to 1) and the block size cannot be changed later.
7932 
7933   For `MATAIJ` matrix this function can be called at a later stage, provided that the specified block sizes
7934   are compatible with the matrix local sizes.
7935 
7936   The row and column block size determine the blocksize of the "row" and "column" vectors returned by `MatCreateVecs()`.
7937 
7938 .seealso: [](ch_matrices), `Mat`, `MatCreateSeqBAIJ()`, `MatCreateBAIJ()`, `MatGetBlockSize()`, `MatSetBlockSize()`, `MatGetBlockSizes()`
7939 @*/
7940 PetscErrorCode MatSetBlockSizes(Mat mat, PetscInt rbs, PetscInt cbs)
7941 {
7942   PetscFunctionBegin;
7943   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
7944   PetscValidLogicalCollectiveInt(mat, rbs, 2);
7945   PetscValidLogicalCollectiveInt(mat, cbs, 3);
7946   PetscTryTypeMethod(mat, setblocksizes, rbs, cbs);
7947   if (mat->rmap->refcnt) {
7948     ISLocalToGlobalMapping l2g  = NULL;
7949     PetscLayout            nmap = NULL;
7950 
7951     PetscCall(PetscLayoutDuplicate(mat->rmap, &nmap));
7952     if (mat->rmap->mapping) PetscCall(ISLocalToGlobalMappingDuplicate(mat->rmap->mapping, &l2g));
7953     PetscCall(PetscLayoutDestroy(&mat->rmap));
7954     mat->rmap          = nmap;
7955     mat->rmap->mapping = l2g;
7956   }
7957   if (mat->cmap->refcnt) {
7958     ISLocalToGlobalMapping l2g  = NULL;
7959     PetscLayout            nmap = NULL;
7960 
7961     PetscCall(PetscLayoutDuplicate(mat->cmap, &nmap));
7962     if (mat->cmap->mapping) PetscCall(ISLocalToGlobalMappingDuplicate(mat->cmap->mapping, &l2g));
7963     PetscCall(PetscLayoutDestroy(&mat->cmap));
7964     mat->cmap          = nmap;
7965     mat->cmap->mapping = l2g;
7966   }
7967   PetscCall(PetscLayoutSetBlockSize(mat->rmap, rbs));
7968   PetscCall(PetscLayoutSetBlockSize(mat->cmap, cbs));
7969   PetscFunctionReturn(PETSC_SUCCESS);
7970 }
7971 
7972 /*@
7973   MatSetBlockSizesFromMats - Sets the matrix block row and column sizes to match a pair of matrices
7974 
7975   Logically Collective
7976 
7977   Input Parameters:
7978 + mat     - the matrix
7979 . fromRow - matrix from which to copy row block size
7980 - fromCol - matrix from which to copy column block size (can be same as fromRow)
7981 
7982   Level: developer
7983 
7984 .seealso: [](ch_matrices), `Mat`, `MatCreateSeqBAIJ()`, `MatCreateBAIJ()`, `MatGetBlockSize()`, `MatSetBlockSizes()`
7985 @*/
7986 PetscErrorCode MatSetBlockSizesFromMats(Mat mat, Mat fromRow, Mat fromCol)
7987 {
7988   PetscFunctionBegin;
7989   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
7990   PetscValidHeaderSpecific(fromRow, MAT_CLASSID, 2);
7991   PetscValidHeaderSpecific(fromCol, MAT_CLASSID, 3);
7992   if (fromRow->rmap->bs > 0) PetscCall(PetscLayoutSetBlockSize(mat->rmap, fromRow->rmap->bs));
7993   if (fromCol->cmap->bs > 0) PetscCall(PetscLayoutSetBlockSize(mat->cmap, fromCol->cmap->bs));
7994   PetscFunctionReturn(PETSC_SUCCESS);
7995 }
7996 
7997 /*@
7998   MatResidual - Default routine to calculate the residual r = b - Ax
7999 
8000   Collective
8001 
8002   Input Parameters:
8003 + mat - the matrix
8004 . b   - the right-hand-side
8005 - x   - the approximate solution
8006 
8007   Output Parameter:
8008 . r - location to store the residual
8009 
8010   Level: developer
8011 
8012 .seealso: [](ch_matrices), `Mat`, `MatMult()`, `MatMultAdd()`, `PCMGSetResidual()`
8013 @*/
8014 PetscErrorCode MatResidual(Mat mat, Vec b, Vec x, Vec r)
8015 {
8016   PetscFunctionBegin;
8017   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
8018   PetscValidHeaderSpecific(b, VEC_CLASSID, 2);
8019   PetscValidHeaderSpecific(x, VEC_CLASSID, 3);
8020   PetscValidHeaderSpecific(r, VEC_CLASSID, 4);
8021   PetscValidType(mat, 1);
8022   MatCheckPreallocated(mat, 1);
8023   PetscCall(PetscLogEventBegin(MAT_Residual, mat, 0, 0, 0));
8024   if (!mat->ops->residual) {
8025     PetscCall(MatMult(mat, x, r));
8026     PetscCall(VecAYPX(r, -1.0, b));
8027   } else {
8028     PetscUseTypeMethod(mat, residual, b, x, r);
8029   }
8030   PetscCall(PetscLogEventEnd(MAT_Residual, mat, 0, 0, 0));
8031   PetscFunctionReturn(PETSC_SUCCESS);
8032 }
8033 
8034 /*MC
8035     MatGetRowIJF90 - Obtains the compressed row storage i and j indices for the local rows of a sparse matrix
8036 
8037     Synopsis:
8038     MatGetRowIJF90(Mat A, PetscInt shift, PetscBool symmetric, PetscBool inodecompressed, PetscInt n, {PetscInt, pointer :: ia(:)}, {PetscInt, pointer :: ja(:)}, PetscBool done,integer ierr)
8039 
8040     Not Collective
8041 
8042     Input Parameters:
8043 +   A - the matrix
8044 .   shift -  0 or 1 indicating we want the indices starting at 0 or 1
8045 .   symmetric - `PETSC_TRUE` or `PETSC_FALSE` indicating the matrix data structure should be symmetrized
8046 -   inodecompressed - `PETSC_TRUE` or `PETSC_FALSE`  indicating if the nonzero structure of the
8047                  inodes or the nonzero elements is wanted. For `MATBAIJ` matrices the compressed version is
8048                  always used.
8049 
8050     Output Parameters:
8051 +   n - number of local rows in the (possibly compressed) matrix
8052 .   ia - the row pointers; that is ia[0] = 0, ia[row] = ia[row-1] + number of elements in that row of the matrix
8053 .   ja - the column indices
8054 -   done - indicates if the routine actually worked and returned appropriate ia[] and ja[] arrays; callers
8055            are responsible for handling the case when done == `PETSC_FALSE` and ia and ja are not set
8056 
8057     Level: developer
8058 
8059     Note:
8060     Use  `MatRestoreRowIJF90()` when you no longer need access to the data
8061 
8062 .seealso: [](ch_matrices), [](sec_fortranarrays), `Mat`, `MATMPIAIJ`, `MatGetRowIJ()`, `MatRestoreRowIJ()`, `MatRestoreRowIJF90()`
8063 M*/
8064 
8065 /*MC
8066     MatRestoreRowIJF90 - restores the compressed row storage i and j indices for the local rows of a sparse matrix obtained with `MatGetRowIJF90()`
8067 
8068     Synopsis:
8069     MatRestoreRowIJF90(Mat A, PetscInt shift, PetscBool symmetric, PetscBool inodecompressed, PetscInt n, {PetscInt, pointer :: ia(:)}, {PetscInt, pointer :: ja(:)}, PetscBool done,integer ierr)
8070 
8071     Not Collective
8072 
8073     Input Parameters:
8074 +   A - the  matrix
8075 .   shift -  0 or 1 indicating we want the indices starting at 0 or 1
8076 .   symmetric - `PETSC_TRUE` or `PETSC_FALSE` indicating the matrix data structure should be symmetrized
8077     inodecompressed - `PETSC_TRUE` or `PETSC_FALSE`  indicating if the nonzero structure of the
8078                  inodes or the nonzero elements is wanted. For `MATBAIJ` matrices the compressed version is
8079                  always used.
8080 .   n - number of local rows in the (possibly compressed) matrix
8081 .   ia - the row pointers; that is ia[0] = 0, ia[row] = ia[row-1] + number of elements in that row of the matrix
8082 .   ja - the column indices
8083 -   done - indicates if the routine actually worked and returned appropriate ia[] and ja[] arrays; callers
8084            are responsible for handling the case when done == `PETSC_FALSE` and ia and ja are not set
8085 
8086     Level: developer
8087 
8088 .seealso: [](ch_matrices), [](sec_fortranarrays), `Mat`, `MATMPIAIJ`, `MatGetRowIJ()`, `MatRestoreRowIJ()`, `MatGetRowIJF90()`
8089 M*/
8090 
8091 /*@C
8092   MatGetRowIJ - Returns the compressed row storage i and j indices for the local rows of a sparse matrix
8093 
8094   Collective
8095 
8096   Input Parameters:
8097 + mat             - the matrix
8098 . shift           - 0 or 1 indicating we want the indices starting at 0 or 1
8099 . symmetric       - `PETSC_TRUE` or `PETSC_FALSE` indicating the matrix data structure should be symmetrized
8100 - inodecompressed - `PETSC_TRUE` or `PETSC_FALSE`  indicating if the nonzero structure of the
8101                  inodes or the nonzero elements is wanted. For `MATBAIJ` matrices the compressed version is
8102                  always used.
8103 
8104   Output Parameters:
8105 + n    - number of local rows in the (possibly compressed) matrix, use `NULL` if not needed
8106 . ia   - the row pointers; that is ia[0] = 0, ia[row] = ia[row-1] + number of elements in that row of the matrix, use `NULL` if not needed
8107 . ja   - the column indices, use `NULL` if not needed
8108 - done - indicates if the routine actually worked and returned appropriate ia[] and ja[] arrays; callers
8109            are responsible for handling the case when done == `PETSC_FALSE` and ia and ja are not set
8110 
8111   Level: developer
8112 
8113   Notes:
8114   You CANNOT change any of the ia[] or ja[] values.
8115 
8116   Use `MatRestoreRowIJ()` when you are finished accessing the ia[] and ja[] values.
8117 
8118   Fortran Notes:
8119   Use
8120 .vb
8121     PetscInt, pointer :: ia(:),ja(:)
8122     call MatGetRowIJF90(mat,shift,symmetric,inodecompressed,n,ia,ja,done,ierr)
8123     ! Access the ith and jth entries via ia(i) and ja(j)
8124 .ve
8125 
8126   `MatGetRowIJ()` Fortran binding is deprecated (since PETSc 3.19), use `MatGetRowIJF90()`
8127 
8128 .seealso: [](ch_matrices), `Mat`, `MATAIJ`, `MatGetRowIJF90()`, `MatGetColumnIJ()`, `MatRestoreRowIJ()`, `MatSeqAIJGetArray()`
8129 @*/
8130 PetscErrorCode MatGetRowIJ(Mat mat, PetscInt shift, PetscBool symmetric, PetscBool inodecompressed, PetscInt *n, const PetscInt *ia[], const PetscInt *ja[], PetscBool *done)
8131 {
8132   PetscFunctionBegin;
8133   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
8134   PetscValidType(mat, 1);
8135   if (n) PetscAssertPointer(n, 5);
8136   if (ia) PetscAssertPointer(ia, 6);
8137   if (ja) PetscAssertPointer(ja, 7);
8138   if (done) PetscAssertPointer(done, 8);
8139   MatCheckPreallocated(mat, 1);
8140   if (!mat->ops->getrowij && done) *done = PETSC_FALSE;
8141   else {
8142     if (done) *done = PETSC_TRUE;
8143     PetscCall(PetscLogEventBegin(MAT_GetRowIJ, mat, 0, 0, 0));
8144     PetscUseTypeMethod(mat, getrowij, shift, symmetric, inodecompressed, n, ia, ja, done);
8145     PetscCall(PetscLogEventEnd(MAT_GetRowIJ, mat, 0, 0, 0));
8146   }
8147   PetscFunctionReturn(PETSC_SUCCESS);
8148 }
8149 
8150 /*@C
8151   MatGetColumnIJ - Returns the compressed column storage i and j indices for sequential matrices.
8152 
8153   Collective
8154 
8155   Input Parameters:
8156 + mat             - the matrix
8157 . shift           - 1 or zero indicating we want the indices starting at 0 or 1
8158 . symmetric       - `PETSC_TRUE` or `PETSC_FALSE` indicating the matrix data structure should be
8159                 symmetrized
8160 . inodecompressed - `PETSC_TRUE` or `PETSC_FALSE` indicating if the nonzero structure of the
8161                  inodes or the nonzero elements is wanted. For `MATBAIJ` matrices the compressed version is
8162                  always used.
8163 . n               - number of columns in the (possibly compressed) matrix
8164 . ia              - the column pointers; that is ia[0] = 0, ia[col] = i[col-1] + number of elements in that col of the matrix
8165 - ja              - the row indices
8166 
8167   Output Parameter:
8168 . done - `PETSC_TRUE` or `PETSC_FALSE`, indicating whether the values have been returned
8169 
8170   Level: developer
8171 
8172 .seealso: [](ch_matrices), `Mat`, `MatGetRowIJ()`, `MatRestoreColumnIJ()`
8173 @*/
8174 PetscErrorCode MatGetColumnIJ(Mat mat, PetscInt shift, PetscBool symmetric, PetscBool inodecompressed, PetscInt *n, const PetscInt *ia[], const PetscInt *ja[], PetscBool *done)
8175 {
8176   PetscFunctionBegin;
8177   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
8178   PetscValidType(mat, 1);
8179   PetscAssertPointer(n, 5);
8180   if (ia) PetscAssertPointer(ia, 6);
8181   if (ja) PetscAssertPointer(ja, 7);
8182   PetscAssertPointer(done, 8);
8183   MatCheckPreallocated(mat, 1);
8184   if (!mat->ops->getcolumnij) *done = PETSC_FALSE;
8185   else {
8186     *done = PETSC_TRUE;
8187     PetscUseTypeMethod(mat, getcolumnij, shift, symmetric, inodecompressed, n, ia, ja, done);
8188   }
8189   PetscFunctionReturn(PETSC_SUCCESS);
8190 }
8191 
8192 /*@C
8193   MatRestoreRowIJ - Call after you are completed with the ia,ja indices obtained with `MatGetRowIJ()`.
8194 
8195   Collective
8196 
8197   Input Parameters:
8198 + mat             - the matrix
8199 . shift           - 1 or zero indicating we want the indices starting at 0 or 1
8200 . symmetric       - `PETSC_TRUE` or `PETSC_FALSE` indicating the matrix data structure should be symmetrized
8201 . inodecompressed - `PETSC_TRUE` or `PETSC_FALSE` indicating if the nonzero structure of the
8202                     inodes or the nonzero elements is wanted. For `MATBAIJ` matrices the compressed version is
8203                     always used.
8204 . n               - size of (possibly compressed) matrix
8205 . ia              - the row pointers
8206 - ja              - the column indices
8207 
8208   Output Parameter:
8209 . done - `PETSC_TRUE` or `PETSC_FALSE` indicated that the values have been returned
8210 
8211   Level: developer
8212 
8213   Note:
8214   This routine zeros out `n`, `ia`, and `ja`. This is to prevent accidental
8215   us of the array after it has been restored. If you pass `NULL`, it will
8216   not zero the pointers.  Use of ia or ja after `MatRestoreRowIJ()` is invalid.
8217 
8218   Fortran Note:
8219   `MatRestoreRowIJ()` Fortran binding is deprecated (since PETSc 3.19), use `MatRestoreRowIJF90()`
8220 
8221 .seealso: [](ch_matrices), `Mat`, `MatGetRowIJ()`, `MatRestoreRowIJF90()`, `MatRestoreColumnIJ()`
8222 @*/
8223 PetscErrorCode MatRestoreRowIJ(Mat mat, PetscInt shift, PetscBool symmetric, PetscBool inodecompressed, PetscInt *n, const PetscInt *ia[], const PetscInt *ja[], PetscBool *done)
8224 {
8225   PetscFunctionBegin;
8226   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
8227   PetscValidType(mat, 1);
8228   if (ia) PetscAssertPointer(ia, 6);
8229   if (ja) PetscAssertPointer(ja, 7);
8230   if (done) PetscAssertPointer(done, 8);
8231   MatCheckPreallocated(mat, 1);
8232 
8233   if (!mat->ops->restorerowij && done) *done = PETSC_FALSE;
8234   else {
8235     if (done) *done = PETSC_TRUE;
8236     PetscUseTypeMethod(mat, restorerowij, shift, symmetric, inodecompressed, n, ia, ja, done);
8237     if (n) *n = 0;
8238     if (ia) *ia = NULL;
8239     if (ja) *ja = NULL;
8240   }
8241   PetscFunctionReturn(PETSC_SUCCESS);
8242 }
8243 
8244 /*@C
8245   MatRestoreColumnIJ - Call after you are completed with the ia,ja indices obtained with `MatGetColumnIJ()`.
8246 
8247   Collective
8248 
8249   Input Parameters:
8250 + mat             - the matrix
8251 . shift           - 1 or zero indicating we want the indices starting at 0 or 1
8252 . symmetric       - `PETSC_TRUE` or `PETSC_FALSE` indicating the matrix data structure should be symmetrized
8253 - inodecompressed - `PETSC_TRUE` or `PETSC_FALSE` indicating if the nonzero structure of the
8254                     inodes or the nonzero elements is wanted. For `MATBAIJ` matrices the compressed version is
8255                     always used.
8256 
8257   Output Parameters:
8258 + n    - size of (possibly compressed) matrix
8259 . ia   - the column pointers
8260 . ja   - the row indices
8261 - done - `PETSC_TRUE` or `PETSC_FALSE` indicated that the values have been returned
8262 
8263   Level: developer
8264 
8265 .seealso: [](ch_matrices), `Mat`, `MatGetColumnIJ()`, `MatRestoreRowIJ()`
8266 @*/
8267 PetscErrorCode MatRestoreColumnIJ(Mat mat, PetscInt shift, PetscBool symmetric, PetscBool inodecompressed, PetscInt *n, const PetscInt *ia[], const PetscInt *ja[], PetscBool *done)
8268 {
8269   PetscFunctionBegin;
8270   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
8271   PetscValidType(mat, 1);
8272   if (ia) PetscAssertPointer(ia, 6);
8273   if (ja) PetscAssertPointer(ja, 7);
8274   PetscAssertPointer(done, 8);
8275   MatCheckPreallocated(mat, 1);
8276 
8277   if (!mat->ops->restorecolumnij) *done = PETSC_FALSE;
8278   else {
8279     *done = PETSC_TRUE;
8280     PetscUseTypeMethod(mat, restorecolumnij, shift, symmetric, inodecompressed, n, ia, ja, done);
8281     if (n) *n = 0;
8282     if (ia) *ia = NULL;
8283     if (ja) *ja = NULL;
8284   }
8285   PetscFunctionReturn(PETSC_SUCCESS);
8286 }
8287 
8288 /*@
8289   MatColoringPatch - Used inside matrix coloring routines that use `MatGetRowIJ()` and/or
8290   `MatGetColumnIJ()`.
8291 
8292   Collective
8293 
8294   Input Parameters:
8295 + mat        - the matrix
8296 . ncolors    - maximum color value
8297 . n          - number of entries in colorarray
8298 - colorarray - array indicating color for each column
8299 
8300   Output Parameter:
8301 . iscoloring - coloring generated using colorarray information
8302 
8303   Level: developer
8304 
8305 .seealso: [](ch_matrices), `Mat`, `MatGetRowIJ()`, `MatGetColumnIJ()`
8306 @*/
8307 PetscErrorCode MatColoringPatch(Mat mat, PetscInt ncolors, PetscInt n, ISColoringValue colorarray[], ISColoring *iscoloring)
8308 {
8309   PetscFunctionBegin;
8310   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
8311   PetscValidType(mat, 1);
8312   PetscAssertPointer(colorarray, 4);
8313   PetscAssertPointer(iscoloring, 5);
8314   MatCheckPreallocated(mat, 1);
8315 
8316   if (!mat->ops->coloringpatch) {
8317     PetscCall(ISColoringCreate(PetscObjectComm((PetscObject)mat), ncolors, n, colorarray, PETSC_OWN_POINTER, iscoloring));
8318   } else {
8319     PetscUseTypeMethod(mat, coloringpatch, ncolors, n, colorarray, iscoloring);
8320   }
8321   PetscFunctionReturn(PETSC_SUCCESS);
8322 }
8323 
8324 /*@
8325   MatSetUnfactored - Resets a factored matrix to be treated as unfactored.
8326 
8327   Logically Collective
8328 
8329   Input Parameter:
8330 . mat - the factored matrix to be reset
8331 
8332   Level: developer
8333 
8334   Notes:
8335   This routine should be used only with factored matrices formed by in-place
8336   factorization via ILU(0) (or by in-place LU factorization for the `MATSEQDENSE`
8337   format).  This option can save memory, for example, when solving nonlinear
8338   systems with a matrix-free Newton-Krylov method and a matrix-based, in-place
8339   ILU(0) preconditioner.
8340 
8341   One can specify in-place ILU(0) factorization by calling
8342 .vb
8343      PCType(pc,PCILU);
8344      PCFactorSeUseInPlace(pc);
8345 .ve
8346   or by using the options -pc_type ilu -pc_factor_in_place
8347 
8348   In-place factorization ILU(0) can also be used as a local
8349   solver for the blocks within the block Jacobi or additive Schwarz
8350   methods (runtime option: -sub_pc_factor_in_place).  See Users-Manual: ch_pc
8351   for details on setting local solver options.
8352 
8353   Most users should employ the `KSP` interface for linear solvers
8354   instead of working directly with matrix algebra routines such as this.
8355   See, e.g., `KSPCreate()`.
8356 
8357 .seealso: [](ch_matrices), `Mat`, `PCFactorSetUseInPlace()`, `PCFactorGetUseInPlace()`
8358 @*/
8359 PetscErrorCode MatSetUnfactored(Mat mat)
8360 {
8361   PetscFunctionBegin;
8362   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
8363   PetscValidType(mat, 1);
8364   MatCheckPreallocated(mat, 1);
8365   mat->factortype = MAT_FACTOR_NONE;
8366   if (!mat->ops->setunfactored) PetscFunctionReturn(PETSC_SUCCESS);
8367   PetscUseTypeMethod(mat, setunfactored);
8368   PetscFunctionReturn(PETSC_SUCCESS);
8369 }
8370 
8371 /*MC
8372     MatDenseGetArrayF90 - Accesses a matrix array from Fortran
8373 
8374     Synopsis:
8375     MatDenseGetArrayF90(Mat x,{Scalar, pointer :: xx_v(:,:)},integer ierr)
8376 
8377     Not Collective
8378 
8379     Input Parameter:
8380 .   x - matrix
8381 
8382     Output Parameters:
8383 +   xx_v - the Fortran pointer to the array
8384 -   ierr - error code
8385 
8386     Example of Usage:
8387 .vb
8388       PetscScalar, pointer xx_v(:,:)
8389       ....
8390       call MatDenseGetArrayF90(x,xx_v,ierr)
8391       a = xx_v(3)
8392       call MatDenseRestoreArrayF90(x,xx_v,ierr)
8393 .ve
8394 
8395     Level: advanced
8396 
8397 .seealso: [](ch_matrices), `Mat`, `MatDenseRestoreArrayF90()`, `MatDenseGetArray()`, `MatDenseRestoreArray()`, `MatSeqAIJGetArrayF90()`
8398 M*/
8399 
8400 /*MC
8401     MatDenseRestoreArrayF90 - Restores a matrix array that has been
8402     accessed with `MatDenseGetArrayF90()`.
8403 
8404     Synopsis:
8405     MatDenseRestoreArrayF90(Mat x,{Scalar, pointer :: xx_v(:,:)},integer ierr)
8406 
8407     Not Collective
8408 
8409     Input Parameters:
8410 +   x - matrix
8411 -   xx_v - the Fortran90 pointer to the array
8412 
8413     Output Parameter:
8414 .   ierr - error code
8415 
8416     Example of Usage:
8417 .vb
8418        PetscScalar, pointer xx_v(:,:)
8419        ....
8420        call MatDenseGetArrayF90(x,xx_v,ierr)
8421        a = xx_v(3)
8422        call MatDenseRestoreArrayF90(x,xx_v,ierr)
8423 .ve
8424 
8425     Level: advanced
8426 
8427 .seealso: [](ch_matrices), `Mat`, `MatDenseGetArrayF90()`, `MatDenseGetArray()`, `MatDenseRestoreArray()`, `MatSeqAIJRestoreArrayF90()`
8428 M*/
8429 
8430 /*MC
8431     MatSeqAIJGetArrayF90 - Accesses a matrix array from Fortran.
8432 
8433     Synopsis:
8434     MatSeqAIJGetArrayF90(Mat x,{Scalar, pointer :: xx_v(:)},integer ierr)
8435 
8436     Not Collective
8437 
8438     Input Parameter:
8439 .   x - matrix
8440 
8441     Output Parameters:
8442 +   xx_v - the Fortran pointer to the array
8443 -   ierr - error code
8444 
8445     Example of Usage:
8446 .vb
8447       PetscScalar, pointer xx_v(:)
8448       ....
8449       call MatSeqAIJGetArrayF90(x,xx_v,ierr)
8450       a = xx_v(3)
8451       call MatSeqAIJRestoreArrayF90(x,xx_v,ierr)
8452 .ve
8453 
8454     Level: advanced
8455 
8456 .seealso: [](ch_matrices), `Mat`, `MatSeqAIJRestoreArrayF90()`, `MatSeqAIJGetArray()`, `MatSeqAIJRestoreArray()`, `MatDenseGetArrayF90()`
8457 M*/
8458 
8459 /*MC
8460     MatSeqAIJRestoreArrayF90 - Restores a matrix array that has been
8461     accessed with `MatSeqAIJGetArrayF90()`.
8462 
8463     Synopsis:
8464     MatSeqAIJRestoreArrayF90(Mat x,{Scalar, pointer :: xx_v(:)},integer ierr)
8465 
8466     Not Collective
8467 
8468     Input Parameters:
8469 +   x - matrix
8470 -   xx_v - the Fortran90 pointer to the array
8471 
8472     Output Parameter:
8473 .   ierr - error code
8474 
8475     Example of Usage:
8476 .vb
8477        PetscScalar, pointer xx_v(:)
8478        ....
8479        call MatSeqAIJGetArrayF90(x,xx_v,ierr)
8480        a = xx_v(3)
8481        call MatSeqAIJRestoreArrayF90(x,xx_v,ierr)
8482 .ve
8483 
8484     Level: advanced
8485 
8486 .seealso: [](ch_matrices), `Mat`, `MatSeqAIJGetArrayF90()`, `MatSeqAIJGetArray()`, `MatSeqAIJRestoreArray()`, `MatDenseRestoreArrayF90()`
8487 M*/
8488 
8489 /*@
8490   MatCreateSubMatrix - Gets a single submatrix on the same number of processors
8491   as the original matrix.
8492 
8493   Collective
8494 
8495   Input Parameters:
8496 + mat   - the original matrix
8497 . isrow - parallel `IS` containing the rows this processor should obtain
8498 . iscol - parallel `IS` containing all columns you wish to keep. Each process should list the columns that will be in IT's "diagonal part" in the new matrix.
8499 - cll   - either `MAT_INITIAL_MATRIX` or `MAT_REUSE_MATRIX`
8500 
8501   Output Parameter:
8502 . newmat - the new submatrix, of the same type as the original matrix
8503 
8504   Level: advanced
8505 
8506   Notes:
8507   The submatrix will be able to be multiplied with vectors using the same layout as `iscol`.
8508 
8509   Some matrix types place restrictions on the row and column indices, such
8510   as that they be sorted or that they be equal to each other. For `MATBAIJ` and `MATSBAIJ` matrices the indices must include all rows/columns of a block;
8511   for example, if the block size is 3 one cannot select the 0 and 2 rows without selecting the 1 row.
8512 
8513   The index sets may not have duplicate entries.
8514 
8515   The first time this is called you should use a cll of `MAT_INITIAL_MATRIX`,
8516   the `MatCreateSubMatrix()` routine will create the newmat for you. Any additional calls
8517   to this routine with a mat of the same nonzero structure and with a call of `MAT_REUSE_MATRIX`
8518   will reuse the matrix generated the first time.  You should call `MatDestroy()` on `newmat` when
8519   you are finished using it.
8520 
8521   The communicator of the newly obtained matrix is ALWAYS the same as the communicator of
8522   the input matrix.
8523 
8524   If `iscol` is `NULL` then all columns are obtained (not supported in Fortran).
8525 
8526   If `isrow` and `iscol` have a nontrivial block-size, then the resulting matrix has this block-size as well. This feature
8527   is used by `PCFIELDSPLIT` to allow easy nesting of its use.
8528 
8529   Example usage:
8530   Consider the following 8x8 matrix with 34 non-zero values, that is
8531   assembled across 3 processors. Let's assume that proc0 owns 3 rows,
8532   proc1 owns 3 rows, proc2 owns 2 rows. This division can be shown
8533   as follows
8534 .vb
8535             1  2  0  |  0  3  0  |  0  4
8536     Proc0   0  5  6  |  7  0  0  |  8  0
8537             9  0 10  | 11  0  0  | 12  0
8538     -------------------------------------
8539            13  0 14  | 15 16 17  |  0  0
8540     Proc1   0 18  0  | 19 20 21  |  0  0
8541             0  0  0  | 22 23  0  | 24  0
8542     -------------------------------------
8543     Proc2  25 26 27  |  0  0 28  | 29  0
8544            30  0  0  | 31 32 33  |  0 34
8545 .ve
8546 
8547   Suppose `isrow` = [0 1 | 4 | 6 7] and `iscol` = [1 2 | 3 4 5 | 6].  The resulting submatrix is
8548 
8549 .vb
8550             2  0  |  0  3  0  |  0
8551     Proc0   5  6  |  7  0  0  |  8
8552     -------------------------------
8553     Proc1  18  0  | 19 20 21  |  0
8554     -------------------------------
8555     Proc2  26 27  |  0  0 28  | 29
8556             0  0  | 31 32 33  |  0
8557 .ve
8558 
8559 .seealso: [](ch_matrices), `Mat`, `MatCreateSubMatrices()`, `MatCreateSubMatricesMPI()`, `MatCreateSubMatrixVirtual()`, `MatSubMatrixVirtualUpdate()`
8560 @*/
8561 PetscErrorCode MatCreateSubMatrix(Mat mat, IS isrow, IS iscol, MatReuse cll, Mat *newmat)
8562 {
8563   PetscMPIInt size;
8564   Mat        *local;
8565   IS          iscoltmp;
8566   PetscBool   flg;
8567 
8568   PetscFunctionBegin;
8569   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
8570   PetscValidHeaderSpecific(isrow, IS_CLASSID, 2);
8571   if (iscol) PetscValidHeaderSpecific(iscol, IS_CLASSID, 3);
8572   PetscAssertPointer(newmat, 5);
8573   if (cll == MAT_REUSE_MATRIX) PetscValidHeaderSpecific(*newmat, MAT_CLASSID, 5);
8574   PetscValidType(mat, 1);
8575   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
8576   PetscCheck(cll != MAT_IGNORE_MATRIX, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Cannot use MAT_IGNORE_MATRIX");
8577 
8578   MatCheckPreallocated(mat, 1);
8579   PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)mat), &size));
8580 
8581   if (!iscol || isrow == iscol) {
8582     PetscBool   stride;
8583     PetscMPIInt grabentirematrix = 0, grab;
8584     PetscCall(PetscObjectTypeCompare((PetscObject)isrow, ISSTRIDE, &stride));
8585     if (stride) {
8586       PetscInt first, step, n, rstart, rend;
8587       PetscCall(ISStrideGetInfo(isrow, &first, &step));
8588       if (step == 1) {
8589         PetscCall(MatGetOwnershipRange(mat, &rstart, &rend));
8590         if (rstart == first) {
8591           PetscCall(ISGetLocalSize(isrow, &n));
8592           if (n == rend - rstart) grabentirematrix = 1;
8593         }
8594       }
8595     }
8596     PetscCallMPI(MPIU_Allreduce(&grabentirematrix, &grab, 1, MPI_INT, MPI_MIN, PetscObjectComm((PetscObject)mat)));
8597     if (grab) {
8598       PetscCall(PetscInfo(mat, "Getting entire matrix as submatrix\n"));
8599       if (cll == MAT_INITIAL_MATRIX) {
8600         *newmat = mat;
8601         PetscCall(PetscObjectReference((PetscObject)mat));
8602       }
8603       PetscFunctionReturn(PETSC_SUCCESS);
8604     }
8605   }
8606 
8607   if (!iscol) {
8608     PetscCall(ISCreateStride(PetscObjectComm((PetscObject)mat), mat->cmap->n, mat->cmap->rstart, 1, &iscoltmp));
8609   } else {
8610     iscoltmp = iscol;
8611   }
8612 
8613   /* if original matrix is on just one processor then use submatrix generated */
8614   if (mat->ops->createsubmatrices && !mat->ops->createsubmatrix && size == 1 && cll == MAT_REUSE_MATRIX) {
8615     PetscCall(MatCreateSubMatrices(mat, 1, &isrow, &iscoltmp, MAT_REUSE_MATRIX, &newmat));
8616     goto setproperties;
8617   } else if (mat->ops->createsubmatrices && !mat->ops->createsubmatrix && size == 1) {
8618     PetscCall(MatCreateSubMatrices(mat, 1, &isrow, &iscoltmp, MAT_INITIAL_MATRIX, &local));
8619     *newmat = *local;
8620     PetscCall(PetscFree(local));
8621     goto setproperties;
8622   } else if (!mat->ops->createsubmatrix) {
8623     /* Create a new matrix type that implements the operation using the full matrix */
8624     PetscCall(PetscLogEventBegin(MAT_CreateSubMat, mat, 0, 0, 0));
8625     switch (cll) {
8626     case MAT_INITIAL_MATRIX:
8627       PetscCall(MatCreateSubMatrixVirtual(mat, isrow, iscoltmp, newmat));
8628       break;
8629     case MAT_REUSE_MATRIX:
8630       PetscCall(MatSubMatrixVirtualUpdate(*newmat, mat, isrow, iscoltmp));
8631       break;
8632     default:
8633       SETERRQ(PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_OUTOFRANGE, "Invalid MatReuse, must be either MAT_INITIAL_MATRIX or MAT_REUSE_MATRIX");
8634     }
8635     PetscCall(PetscLogEventEnd(MAT_CreateSubMat, mat, 0, 0, 0));
8636     goto setproperties;
8637   }
8638 
8639   PetscCall(PetscLogEventBegin(MAT_CreateSubMat, mat, 0, 0, 0));
8640   PetscUseTypeMethod(mat, createsubmatrix, isrow, iscoltmp, cll, newmat);
8641   PetscCall(PetscLogEventEnd(MAT_CreateSubMat, mat, 0, 0, 0));
8642 
8643 setproperties:
8644   if ((*newmat)->symmetric == PETSC_BOOL3_UNKNOWN && (*newmat)->structurally_symmetric == PETSC_BOOL3_UNKNOWN && (*newmat)->spd == PETSC_BOOL3_UNKNOWN && (*newmat)->hermitian == PETSC_BOOL3_UNKNOWN) {
8645     PetscCall(ISEqualUnsorted(isrow, iscoltmp, &flg));
8646     if (flg) PetscCall(MatPropagateSymmetryOptions(mat, *newmat));
8647   }
8648   if (!iscol) PetscCall(ISDestroy(&iscoltmp));
8649   if (*newmat && cll == MAT_INITIAL_MATRIX) PetscCall(PetscObjectStateIncrease((PetscObject)*newmat));
8650   PetscFunctionReturn(PETSC_SUCCESS);
8651 }
8652 
8653 /*@
8654   MatPropagateSymmetryOptions - Propagates symmetry options set on a matrix to another matrix
8655 
8656   Not Collective
8657 
8658   Input Parameters:
8659 + A - the matrix we wish to propagate options from
8660 - B - the matrix we wish to propagate options to
8661 
8662   Level: beginner
8663 
8664   Note:
8665   Propagates the options associated to `MAT_SYMMETRY_ETERNAL`, `MAT_STRUCTURALLY_SYMMETRIC`, `MAT_HERMITIAN`, `MAT_SPD`, `MAT_SYMMETRIC`, and `MAT_STRUCTURAL_SYMMETRY_ETERNAL`
8666 
8667 .seealso: [](ch_matrices), `Mat`, `MatSetOption()`, `MatIsSymmetricKnown()`, `MatIsSPDKnown()`, `MatIsHermitianKnown()`, `MatIsStructurallySymmetricKnown()`
8668 @*/
8669 PetscErrorCode MatPropagateSymmetryOptions(Mat A, Mat B)
8670 {
8671   PetscFunctionBegin;
8672   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
8673   PetscValidHeaderSpecific(B, MAT_CLASSID, 2);
8674   B->symmetry_eternal            = A->symmetry_eternal;
8675   B->structural_symmetry_eternal = A->structural_symmetry_eternal;
8676   B->symmetric                   = A->symmetric;
8677   B->structurally_symmetric      = A->structurally_symmetric;
8678   B->spd                         = A->spd;
8679   B->hermitian                   = A->hermitian;
8680   PetscFunctionReturn(PETSC_SUCCESS);
8681 }
8682 
8683 /*@
8684   MatStashSetInitialSize - sets the sizes of the matrix stash, that is
8685   used during the assembly process to store values that belong to
8686   other processors.
8687 
8688   Not Collective
8689 
8690   Input Parameters:
8691 + mat   - the matrix
8692 . size  - the initial size of the stash.
8693 - bsize - the initial size of the block-stash(if used).
8694 
8695   Options Database Keys:
8696 + -matstash_initial_size <size> or <size0,size1,...sizep-1>            - set initial size
8697 - -matstash_block_initial_size <bsize>  or <bsize0,bsize1,...bsizep-1> - set initial block size
8698 
8699   Level: intermediate
8700 
8701   Notes:
8702   The block-stash is used for values set with `MatSetValuesBlocked()` while
8703   the stash is used for values set with `MatSetValues()`
8704 
8705   Run with the option -info and look for output of the form
8706   MatAssemblyBegin_MPIXXX:Stash has MM entries, uses nn mallocs.
8707   to determine the appropriate value, MM, to use for size and
8708   MatAssemblyBegin_MPIXXX:Block-Stash has BMM entries, uses nn mallocs.
8709   to determine the value, BMM to use for bsize
8710 
8711 .seealso: [](ch_matrices), `MatAssemblyBegin()`, `MatAssemblyEnd()`, `Mat`, `MatStashGetInfo()`
8712 @*/
8713 PetscErrorCode MatStashSetInitialSize(Mat mat, PetscInt size, PetscInt bsize)
8714 {
8715   PetscFunctionBegin;
8716   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
8717   PetscValidType(mat, 1);
8718   PetscCall(MatStashSetInitialSize_Private(&mat->stash, size));
8719   PetscCall(MatStashSetInitialSize_Private(&mat->bstash, bsize));
8720   PetscFunctionReturn(PETSC_SUCCESS);
8721 }
8722 
8723 /*@
8724   MatInterpolateAdd - $w = y + A*x$ or $A^T*x$ depending on the shape of
8725   the matrix
8726 
8727   Neighbor-wise Collective
8728 
8729   Input Parameters:
8730 + A - the matrix
8731 . x - the vector to be multiplied by the interpolation operator
8732 - y - the vector to be added to the result
8733 
8734   Output Parameter:
8735 . w - the resulting vector
8736 
8737   Level: intermediate
8738 
8739   Notes:
8740   `w` may be the same vector as `y`.
8741 
8742   This allows one to use either the restriction or interpolation (its transpose)
8743   matrix to do the interpolation
8744 
8745 .seealso: [](ch_matrices), `Mat`, `MatMultAdd()`, `MatMultTransposeAdd()`, `MatRestrict()`, `PCMG`
8746 @*/
8747 PetscErrorCode MatInterpolateAdd(Mat A, Vec x, Vec y, Vec w)
8748 {
8749   PetscInt M, N, Ny;
8750 
8751   PetscFunctionBegin;
8752   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
8753   PetscValidHeaderSpecific(x, VEC_CLASSID, 2);
8754   PetscValidHeaderSpecific(y, VEC_CLASSID, 3);
8755   PetscValidHeaderSpecific(w, VEC_CLASSID, 4);
8756   PetscCall(MatGetSize(A, &M, &N));
8757   PetscCall(VecGetSize(y, &Ny));
8758   if (M == Ny) {
8759     PetscCall(MatMultAdd(A, x, y, w));
8760   } else {
8761     PetscCall(MatMultTransposeAdd(A, x, y, w));
8762   }
8763   PetscFunctionReturn(PETSC_SUCCESS);
8764 }
8765 
8766 /*@
8767   MatInterpolate - $y = A*x$ or $A^T*x$ depending on the shape of
8768   the matrix
8769 
8770   Neighbor-wise Collective
8771 
8772   Input Parameters:
8773 + A - the matrix
8774 - x - the vector to be interpolated
8775 
8776   Output Parameter:
8777 . y - the resulting vector
8778 
8779   Level: intermediate
8780 
8781   Note:
8782   This allows one to use either the restriction or interpolation (its transpose)
8783   matrix to do the interpolation
8784 
8785 .seealso: [](ch_matrices), `Mat`, `MatMultAdd()`, `MatMultTransposeAdd()`, `MatRestrict()`, `PCMG`
8786 @*/
8787 PetscErrorCode MatInterpolate(Mat A, Vec x, Vec y)
8788 {
8789   PetscInt M, N, Ny;
8790 
8791   PetscFunctionBegin;
8792   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
8793   PetscValidHeaderSpecific(x, VEC_CLASSID, 2);
8794   PetscValidHeaderSpecific(y, VEC_CLASSID, 3);
8795   PetscCall(MatGetSize(A, &M, &N));
8796   PetscCall(VecGetSize(y, &Ny));
8797   if (M == Ny) {
8798     PetscCall(MatMult(A, x, y));
8799   } else {
8800     PetscCall(MatMultTranspose(A, x, y));
8801   }
8802   PetscFunctionReturn(PETSC_SUCCESS);
8803 }
8804 
8805 /*@
8806   MatRestrict - $y = A*x$ or $A^T*x$
8807 
8808   Neighbor-wise Collective
8809 
8810   Input Parameters:
8811 + A - the matrix
8812 - x - the vector to be restricted
8813 
8814   Output Parameter:
8815 . y - the resulting vector
8816 
8817   Level: intermediate
8818 
8819   Note:
8820   This allows one to use either the restriction or interpolation (its transpose)
8821   matrix to do the restriction
8822 
8823 .seealso: [](ch_matrices), `Mat`, `MatMultAdd()`, `MatMultTransposeAdd()`, `MatInterpolate()`, `PCMG`
8824 @*/
8825 PetscErrorCode MatRestrict(Mat A, Vec x, Vec y)
8826 {
8827   PetscInt M, N, Nx;
8828 
8829   PetscFunctionBegin;
8830   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
8831   PetscValidHeaderSpecific(x, VEC_CLASSID, 2);
8832   PetscValidHeaderSpecific(y, VEC_CLASSID, 3);
8833   PetscCall(MatGetSize(A, &M, &N));
8834   PetscCall(VecGetSize(x, &Nx));
8835   if (M == Nx) {
8836     PetscCall(MatMultTranspose(A, x, y));
8837   } else {
8838     PetscCall(MatMult(A, x, y));
8839   }
8840   PetscFunctionReturn(PETSC_SUCCESS);
8841 }
8842 
8843 /*@
8844   MatMatInterpolateAdd - $Y = W + A*X$ or $W + A^T*X$ depending on the shape of `A`
8845 
8846   Neighbor-wise Collective
8847 
8848   Input Parameters:
8849 + A - the matrix
8850 . x - the input dense matrix to be multiplied
8851 - w - the input dense matrix to be added to the result
8852 
8853   Output Parameter:
8854 . y - the output dense matrix
8855 
8856   Level: intermediate
8857 
8858   Note:
8859   This allows one to use either the restriction or interpolation (its transpose)
8860   matrix to do the interpolation. `y` matrix can be reused if already created with the proper sizes,
8861   otherwise it will be recreated. `y` must be initialized to `NULL` if not supplied.
8862 
8863 .seealso: [](ch_matrices), `Mat`, `MatInterpolateAdd()`, `MatMatInterpolate()`, `MatMatRestrict()`, `PCMG`
8864 @*/
8865 PetscErrorCode MatMatInterpolateAdd(Mat A, Mat x, Mat w, Mat *y)
8866 {
8867   PetscInt  M, N, Mx, Nx, Mo, My = 0, Ny = 0;
8868   PetscBool trans = PETSC_TRUE;
8869   MatReuse  reuse = MAT_INITIAL_MATRIX;
8870 
8871   PetscFunctionBegin;
8872   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
8873   PetscValidHeaderSpecific(x, MAT_CLASSID, 2);
8874   PetscValidType(x, 2);
8875   if (w) PetscValidHeaderSpecific(w, MAT_CLASSID, 3);
8876   if (*y) PetscValidHeaderSpecific(*y, MAT_CLASSID, 4);
8877   PetscCall(MatGetSize(A, &M, &N));
8878   PetscCall(MatGetSize(x, &Mx, &Nx));
8879   if (N == Mx) trans = PETSC_FALSE;
8880   else PetscCheck(M == Mx, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Size mismatch: A %" PetscInt_FMT "x%" PetscInt_FMT ", X %" PetscInt_FMT "x%" PetscInt_FMT, M, N, Mx, Nx);
8881   Mo = trans ? N : M;
8882   if (*y) {
8883     PetscCall(MatGetSize(*y, &My, &Ny));
8884     if (Mo == My && Nx == Ny) {
8885       reuse = MAT_REUSE_MATRIX;
8886     } else {
8887       PetscCheck(w || *y != w, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Cannot reuse y and w, size mismatch: A %" PetscInt_FMT "x%" PetscInt_FMT ", X %" PetscInt_FMT "x%" PetscInt_FMT ", Y %" PetscInt_FMT "x%" PetscInt_FMT, M, N, Mx, Nx, My, Ny);
8888       PetscCall(MatDestroy(y));
8889     }
8890   }
8891 
8892   if (w && *y == w) { /* this is to minimize changes in PCMG */
8893     PetscBool flg;
8894 
8895     PetscCall(PetscObjectQuery((PetscObject)*y, "__MatMatIntAdd_w", (PetscObject *)&w));
8896     if (w) {
8897       PetscInt My, Ny, Mw, Nw;
8898 
8899       PetscCall(PetscObjectTypeCompare((PetscObject)*y, ((PetscObject)w)->type_name, &flg));
8900       PetscCall(MatGetSize(*y, &My, &Ny));
8901       PetscCall(MatGetSize(w, &Mw, &Nw));
8902       if (!flg || My != Mw || Ny != Nw) w = NULL;
8903     }
8904     if (!w) {
8905       PetscCall(MatDuplicate(*y, MAT_COPY_VALUES, &w));
8906       PetscCall(PetscObjectCompose((PetscObject)*y, "__MatMatIntAdd_w", (PetscObject)w));
8907       PetscCall(PetscObjectDereference((PetscObject)w));
8908     } else {
8909       PetscCall(MatCopy(*y, w, UNKNOWN_NONZERO_PATTERN));
8910     }
8911   }
8912   if (!trans) {
8913     PetscCall(MatMatMult(A, x, reuse, PETSC_DETERMINE, y));
8914   } else {
8915     PetscCall(MatTransposeMatMult(A, x, reuse, PETSC_DETERMINE, y));
8916   }
8917   if (w) PetscCall(MatAXPY(*y, 1.0, w, UNKNOWN_NONZERO_PATTERN));
8918   PetscFunctionReturn(PETSC_SUCCESS);
8919 }
8920 
8921 /*@
8922   MatMatInterpolate - $Y = A*X$ or $A^T*X$ depending on the shape of `A`
8923 
8924   Neighbor-wise Collective
8925 
8926   Input Parameters:
8927 + A - the matrix
8928 - x - the input dense matrix
8929 
8930   Output Parameter:
8931 . y - the output dense matrix
8932 
8933   Level: intermediate
8934 
8935   Note:
8936   This allows one to use either the restriction or interpolation (its transpose)
8937   matrix to do the interpolation. `y` matrix can be reused if already created with the proper sizes,
8938   otherwise it will be recreated. `y` must be initialized to `NULL` if not supplied.
8939 
8940 .seealso: [](ch_matrices), `Mat`, `MatInterpolate()`, `MatRestrict()`, `MatMatRestrict()`, `PCMG`
8941 @*/
8942 PetscErrorCode MatMatInterpolate(Mat A, Mat x, Mat *y)
8943 {
8944   PetscFunctionBegin;
8945   PetscCall(MatMatInterpolateAdd(A, x, NULL, y));
8946   PetscFunctionReturn(PETSC_SUCCESS);
8947 }
8948 
8949 /*@
8950   MatMatRestrict - $Y = A*X$ or $A^T*X$ depending on the shape of `A`
8951 
8952   Neighbor-wise Collective
8953 
8954   Input Parameters:
8955 + A - the matrix
8956 - x - the input dense matrix
8957 
8958   Output Parameter:
8959 . y - the output dense matrix
8960 
8961   Level: intermediate
8962 
8963   Note:
8964   This allows one to use either the restriction or interpolation (its transpose)
8965   matrix to do the restriction. `y` matrix can be reused if already created with the proper sizes,
8966   otherwise it will be recreated. `y` must be initialized to `NULL` if not supplied.
8967 
8968 .seealso: [](ch_matrices), `Mat`, `MatRestrict()`, `MatInterpolate()`, `MatMatInterpolate()`, `PCMG`
8969 @*/
8970 PetscErrorCode MatMatRestrict(Mat A, Mat x, Mat *y)
8971 {
8972   PetscFunctionBegin;
8973   PetscCall(MatMatInterpolateAdd(A, x, NULL, y));
8974   PetscFunctionReturn(PETSC_SUCCESS);
8975 }
8976 
8977 /*@
8978   MatGetNullSpace - retrieves the null space of a matrix.
8979 
8980   Logically Collective
8981 
8982   Input Parameters:
8983 + mat    - the matrix
8984 - nullsp - the null space object
8985 
8986   Level: developer
8987 
8988 .seealso: [](ch_matrices), `Mat`, `MatCreate()`, `MatNullSpaceCreate()`, `MatSetNearNullSpace()`, `MatSetNullSpace()`, `MatNullSpace`
8989 @*/
8990 PetscErrorCode MatGetNullSpace(Mat mat, MatNullSpace *nullsp)
8991 {
8992   PetscFunctionBegin;
8993   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
8994   PetscAssertPointer(nullsp, 2);
8995   *nullsp = (mat->symmetric == PETSC_BOOL3_TRUE && !mat->nullsp) ? mat->transnullsp : mat->nullsp;
8996   PetscFunctionReturn(PETSC_SUCCESS);
8997 }
8998 
8999 /*@C
9000   MatGetNullSpaces - gets the null spaces, transpose null spaces, and near null spaces from an array of matrices
9001 
9002   Logically Collective
9003 
9004   Input Parameters:
9005 + n   - the number of matrices
9006 - mat - the array of matrices
9007 
9008   Output Parameters:
9009 . nullsp - an array of null spaces, `NULL` for each matrix that does not have a null space, length 3 * `n`
9010 
9011   Level: developer
9012 
9013   Note:
9014   Call `MatRestoreNullspaces()` to provide these to another array of matrices
9015 
9016 .seealso: [](ch_matrices), `Mat`, `MatCreate()`, `MatNullSpaceCreate()`, `MatSetNearNullSpace()`, `MatGetNullSpace()`, `MatSetTransposeNullSpace()`, `MatGetTransposeNullSpace()`,
9017           `MatNullSpaceRemove()`, `MatRestoreNullSpaces()`
9018 @*/
9019 PetscErrorCode MatGetNullSpaces(PetscInt n, Mat mat[], MatNullSpace *nullsp[])
9020 {
9021   PetscFunctionBegin;
9022   PetscCheck(n >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Number of matrices %" PetscInt_FMT " must be non-negative", n);
9023   PetscAssertPointer(mat, 2);
9024   PetscAssertPointer(nullsp, 3);
9025 
9026   PetscCall(PetscCalloc1(3 * n, nullsp));
9027   for (PetscInt i = 0; i < n; i++) {
9028     PetscValidHeaderSpecific(mat[i], MAT_CLASSID, 2);
9029     (*nullsp)[i] = mat[i]->nullsp;
9030     PetscCall(PetscObjectReference((PetscObject)(*nullsp)[i]));
9031     (*nullsp)[n + i] = mat[i]->nearnullsp;
9032     PetscCall(PetscObjectReference((PetscObject)(*nullsp)[n + i]));
9033     (*nullsp)[2 * n + i] = mat[i]->transnullsp;
9034     PetscCall(PetscObjectReference((PetscObject)(*nullsp)[2 * n + i]));
9035   }
9036   PetscFunctionReturn(PETSC_SUCCESS);
9037 }
9038 
9039 /*@C
9040   MatRestoreNullSpaces - sets the null spaces, transpose null spaces, and near null spaces obtained with `MatGetNullSpaces()` for an array of matrices
9041 
9042   Logically Collective
9043 
9044   Input Parameters:
9045 + n      - the number of matrices
9046 . mat    - the array of matrices
9047 - nullsp - an array of null spaces
9048 
9049   Level: developer
9050 
9051   Note:
9052   Call `MatGetNullSpaces()` to create `nullsp`
9053 
9054 .seealso: [](ch_matrices), `Mat`, `MatCreate()`, `MatNullSpaceCreate()`, `MatSetNearNullSpace()`, `MatGetNullSpace()`, `MatSetTransposeNullSpace()`, `MatGetTransposeNullSpace()`,
9055           `MatNullSpaceRemove()`, `MatGetNullSpaces()`
9056 @*/
9057 PetscErrorCode MatRestoreNullSpaces(PetscInt n, Mat mat[], MatNullSpace *nullsp[])
9058 {
9059   PetscFunctionBegin;
9060   PetscCheck(n >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Number of matrices %" PetscInt_FMT " must be non-negative", n);
9061   PetscAssertPointer(mat, 2);
9062   PetscAssertPointer(nullsp, 3);
9063   PetscAssertPointer(*nullsp, 3);
9064 
9065   for (PetscInt i = 0; i < n; i++) {
9066     PetscValidHeaderSpecific(mat[i], MAT_CLASSID, 2);
9067     PetscCall(MatSetNullSpace(mat[i], (*nullsp)[i]));
9068     PetscCall(PetscObjectDereference((PetscObject)(*nullsp)[i]));
9069     PetscCall(MatSetNearNullSpace(mat[i], (*nullsp)[n + i]));
9070     PetscCall(PetscObjectDereference((PetscObject)(*nullsp)[n + i]));
9071     PetscCall(MatSetTransposeNullSpace(mat[i], (*nullsp)[2 * n + i]));
9072     PetscCall(PetscObjectDereference((PetscObject)(*nullsp)[2 * n + i]));
9073   }
9074   PetscCall(PetscFree(*nullsp));
9075   PetscFunctionReturn(PETSC_SUCCESS);
9076 }
9077 
9078 /*@
9079   MatSetNullSpace - attaches a null space to a matrix.
9080 
9081   Logically Collective
9082 
9083   Input Parameters:
9084 + mat    - the matrix
9085 - nullsp - the null space object
9086 
9087   Level: advanced
9088 
9089   Notes:
9090   This null space is used by the `KSP` linear solvers to solve singular systems.
9091 
9092   Overwrites any previous null space that may have been attached. You can remove the null space from the matrix object by calling this routine with an nullsp of `NULL`
9093 
9094   For inconsistent singular systems (linear systems where the right-hand side is not in the range of the operator) the `KSP` residuals will not converge to
9095   to zero but the linear system will still be solved in a least squares sense.
9096 
9097   The fundamental theorem of linear algebra (Gilbert Strang, Introduction to Applied Mathematics, page 72) states that
9098   the domain of a matrix A (from $R^n$ to $R^m$ (m rows, n columns) $R^n$ = the direct sum of the null space of A, n(A), + the range of $A^T$, $R(A^T)$.
9099   Similarly $R^m$ = direct sum n($A^T$) + R(A).  Hence the linear system $A x = b$ has a solution only if b in R(A) (or correspondingly b is orthogonal to
9100   n($A^T$)) and if x is a solution then x + alpha n(A) is a solution for any alpha. The minimum norm solution is orthogonal to n(A). For problems without a solution
9101   the solution that minimizes the norm of the residual (the least squares solution) can be obtained by solving A x = \hat{b} where \hat{b} is b orthogonalized to the n($A^T$).
9102   This  \hat{b} can be obtained by calling `MatNullSpaceRemove()` with the null space of the transpose of the matrix.
9103 
9104   If the matrix is known to be symmetric because it is an `MATSBAIJ` matrix or one as called
9105   `MatSetOption`(mat,`MAT_SYMMETRIC` or possibly `MAT_SYMMETRY_ETERNAL`,`PETSC_TRUE`); this
9106   routine also automatically calls `MatSetTransposeNullSpace()`.
9107 
9108   The user should call `MatNullSpaceDestroy()`.
9109 
9110 .seealso: [](ch_matrices), `Mat`, `MatCreate()`, `MatNullSpaceCreate()`, `MatSetNearNullSpace()`, `MatGetNullSpace()`, `MatSetTransposeNullSpace()`, `MatGetTransposeNullSpace()`, `MatNullSpaceRemove()`,
9111           `KSPSetPCSide()`
9112 @*/
9113 PetscErrorCode MatSetNullSpace(Mat mat, MatNullSpace nullsp)
9114 {
9115   PetscFunctionBegin;
9116   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
9117   if (nullsp) PetscValidHeaderSpecific(nullsp, MAT_NULLSPACE_CLASSID, 2);
9118   if (nullsp) PetscCall(PetscObjectReference((PetscObject)nullsp));
9119   PetscCall(MatNullSpaceDestroy(&mat->nullsp));
9120   mat->nullsp = nullsp;
9121   if (mat->symmetric == PETSC_BOOL3_TRUE) PetscCall(MatSetTransposeNullSpace(mat, nullsp));
9122   PetscFunctionReturn(PETSC_SUCCESS);
9123 }
9124 
9125 /*@
9126   MatGetTransposeNullSpace - retrieves the null space of the transpose of a matrix.
9127 
9128   Logically Collective
9129 
9130   Input Parameters:
9131 + mat    - the matrix
9132 - nullsp - the null space object
9133 
9134   Level: developer
9135 
9136 .seealso: [](ch_matrices), `Mat`, `MatNullSpace`, `MatCreate()`, `MatNullSpaceCreate()`, `MatSetNearNullSpace()`, `MatSetTransposeNullSpace()`, `MatSetNullSpace()`, `MatGetNullSpace()`
9137 @*/
9138 PetscErrorCode MatGetTransposeNullSpace(Mat mat, MatNullSpace *nullsp)
9139 {
9140   PetscFunctionBegin;
9141   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
9142   PetscValidType(mat, 1);
9143   PetscAssertPointer(nullsp, 2);
9144   *nullsp = (mat->symmetric == PETSC_BOOL3_TRUE && !mat->transnullsp) ? mat->nullsp : mat->transnullsp;
9145   PetscFunctionReturn(PETSC_SUCCESS);
9146 }
9147 
9148 /*@
9149   MatSetTransposeNullSpace - attaches the null space of a transpose of a matrix to the matrix
9150 
9151   Logically Collective
9152 
9153   Input Parameters:
9154 + mat    - the matrix
9155 - nullsp - the null space object
9156 
9157   Level: advanced
9158 
9159   Notes:
9160   This allows solving singular linear systems defined by the transpose of the matrix using `KSP` solvers with left preconditioning.
9161 
9162   See `MatSetNullSpace()`
9163 
9164 .seealso: [](ch_matrices), `Mat`, `MatNullSpace`, `MatCreate()`, `MatNullSpaceCreate()`, `MatSetNearNullSpace()`, `MatGetNullSpace()`, `MatSetNullSpace()`, `MatGetTransposeNullSpace()`, `MatNullSpaceRemove()`, `KSPSetPCSide()`
9165 @*/
9166 PetscErrorCode MatSetTransposeNullSpace(Mat mat, MatNullSpace nullsp)
9167 {
9168   PetscFunctionBegin;
9169   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
9170   if (nullsp) PetscValidHeaderSpecific(nullsp, MAT_NULLSPACE_CLASSID, 2);
9171   if (nullsp) PetscCall(PetscObjectReference((PetscObject)nullsp));
9172   PetscCall(MatNullSpaceDestroy(&mat->transnullsp));
9173   mat->transnullsp = nullsp;
9174   PetscFunctionReturn(PETSC_SUCCESS);
9175 }
9176 
9177 /*@
9178   MatSetNearNullSpace - attaches a null space to a matrix, which is often the null space (rigid body modes) of the operator without boundary conditions
9179   This null space will be used to provide near null space vectors to a multigrid preconditioner built from this matrix.
9180 
9181   Logically Collective
9182 
9183   Input Parameters:
9184 + mat    - the matrix
9185 - nullsp - the null space object
9186 
9187   Level: advanced
9188 
9189   Notes:
9190   Overwrites any previous near null space that may have been attached
9191 
9192   You can remove the null space by calling this routine with an `nullsp` of `NULL`
9193 
9194 .seealso: [](ch_matrices), `Mat`, `MatNullSpace`, `MatCreate()`, `MatNullSpaceCreate()`, `MatSetNullSpace()`, `MatNullSpaceCreateRigidBody()`, `MatGetNearNullSpace()`
9195 @*/
9196 PetscErrorCode MatSetNearNullSpace(Mat mat, MatNullSpace nullsp)
9197 {
9198   PetscFunctionBegin;
9199   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
9200   PetscValidType(mat, 1);
9201   if (nullsp) PetscValidHeaderSpecific(nullsp, MAT_NULLSPACE_CLASSID, 2);
9202   MatCheckPreallocated(mat, 1);
9203   if (nullsp) PetscCall(PetscObjectReference((PetscObject)nullsp));
9204   PetscCall(MatNullSpaceDestroy(&mat->nearnullsp));
9205   mat->nearnullsp = nullsp;
9206   PetscFunctionReturn(PETSC_SUCCESS);
9207 }
9208 
9209 /*@
9210   MatGetNearNullSpace - Get null space attached with `MatSetNearNullSpace()`
9211 
9212   Not Collective
9213 
9214   Input Parameter:
9215 . mat - the matrix
9216 
9217   Output Parameter:
9218 . nullsp - the null space object, `NULL` if not set
9219 
9220   Level: advanced
9221 
9222 .seealso: [](ch_matrices), `Mat`, `MatNullSpace`, `MatSetNearNullSpace()`, `MatGetNullSpace()`, `MatNullSpaceCreate()`
9223 @*/
9224 PetscErrorCode MatGetNearNullSpace(Mat mat, MatNullSpace *nullsp)
9225 {
9226   PetscFunctionBegin;
9227   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
9228   PetscValidType(mat, 1);
9229   PetscAssertPointer(nullsp, 2);
9230   MatCheckPreallocated(mat, 1);
9231   *nullsp = mat->nearnullsp;
9232   PetscFunctionReturn(PETSC_SUCCESS);
9233 }
9234 
9235 /*@
9236   MatICCFactor - Performs in-place incomplete Cholesky factorization of matrix.
9237 
9238   Collective
9239 
9240   Input Parameters:
9241 + mat  - the matrix
9242 . row  - row/column permutation
9243 - info - information on desired factorization process
9244 
9245   Level: developer
9246 
9247   Notes:
9248   Probably really in-place only when level of fill is zero, otherwise allocates
9249   new space to store factored matrix and deletes previous memory.
9250 
9251   Most users should employ the `KSP` interface for linear solvers
9252   instead of working directly with matrix algebra routines such as this.
9253   See, e.g., `KSPCreate()`.
9254 
9255   Developer Note:
9256   The Fortran interface is not autogenerated as the
9257   interface definition cannot be generated correctly [due to `MatFactorInfo`]
9258 
9259 .seealso: [](ch_matrices), `Mat`, `MatFactorInfo`, `MatGetFactor()`, `MatICCFactorSymbolic()`, `MatLUFactorNumeric()`, `MatCholeskyFactor()`
9260 @*/
9261 PetscErrorCode MatICCFactor(Mat mat, IS row, const MatFactorInfo *info)
9262 {
9263   PetscFunctionBegin;
9264   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
9265   PetscValidType(mat, 1);
9266   if (row) PetscValidHeaderSpecific(row, IS_CLASSID, 2);
9267   PetscAssertPointer(info, 3);
9268   PetscCheck(mat->rmap->N == mat->cmap->N, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONG, "matrix must be square");
9269   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
9270   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
9271   MatCheckPreallocated(mat, 1);
9272   PetscUseTypeMethod(mat, iccfactor, row, info);
9273   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
9274   PetscFunctionReturn(PETSC_SUCCESS);
9275 }
9276 
9277 /*@
9278   MatDiagonalScaleLocal - Scales columns of a matrix given the scaling values including the
9279   ghosted ones.
9280 
9281   Not Collective
9282 
9283   Input Parameters:
9284 + mat  - the matrix
9285 - diag - the diagonal values, including ghost ones
9286 
9287   Level: developer
9288 
9289   Notes:
9290   Works only for `MATMPIAIJ` and `MATMPIBAIJ` matrices
9291 
9292   This allows one to avoid during communication to perform the scaling that must be done with `MatDiagonalScale()`
9293 
9294 .seealso: [](ch_matrices), `Mat`, `MatDiagonalScale()`
9295 @*/
9296 PetscErrorCode MatDiagonalScaleLocal(Mat mat, Vec diag)
9297 {
9298   PetscMPIInt size;
9299 
9300   PetscFunctionBegin;
9301   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
9302   PetscValidHeaderSpecific(diag, VEC_CLASSID, 2);
9303   PetscValidType(mat, 1);
9304 
9305   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Matrix must be already assembled");
9306   PetscCall(PetscLogEventBegin(MAT_Scale, mat, 0, 0, 0));
9307   PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)mat), &size));
9308   if (size == 1) {
9309     PetscInt n, m;
9310     PetscCall(VecGetSize(diag, &n));
9311     PetscCall(MatGetSize(mat, NULL, &m));
9312     PetscCheck(m == n, PETSC_COMM_SELF, PETSC_ERR_SUP, "Only supported for sequential matrices when no ghost points/periodic conditions");
9313     PetscCall(MatDiagonalScale(mat, NULL, diag));
9314   } else {
9315     PetscUseMethod(mat, "MatDiagonalScaleLocal_C", (Mat, Vec), (mat, diag));
9316   }
9317   PetscCall(PetscLogEventEnd(MAT_Scale, mat, 0, 0, 0));
9318   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
9319   PetscFunctionReturn(PETSC_SUCCESS);
9320 }
9321 
9322 /*@
9323   MatGetInertia - Gets the inertia from a factored matrix
9324 
9325   Collective
9326 
9327   Input Parameter:
9328 . mat - the matrix
9329 
9330   Output Parameters:
9331 + nneg  - number of negative eigenvalues
9332 . nzero - number of zero eigenvalues
9333 - npos  - number of positive eigenvalues
9334 
9335   Level: advanced
9336 
9337   Note:
9338   Matrix must have been factored by `MatCholeskyFactor()`
9339 
9340 .seealso: [](ch_matrices), `Mat`, `MatGetFactor()`, `MatCholeskyFactor()`
9341 @*/
9342 PetscErrorCode MatGetInertia(Mat mat, PetscInt *nneg, PetscInt *nzero, PetscInt *npos)
9343 {
9344   PetscFunctionBegin;
9345   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
9346   PetscValidType(mat, 1);
9347   PetscCheck(mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Unfactored matrix");
9348   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Numeric factor mat is not assembled");
9349   PetscUseTypeMethod(mat, getinertia, nneg, nzero, npos);
9350   PetscFunctionReturn(PETSC_SUCCESS);
9351 }
9352 
9353 /*@C
9354   MatSolves - Solves $A x = b$, given a factored matrix, for a collection of vectors
9355 
9356   Neighbor-wise Collective
9357 
9358   Input Parameters:
9359 + mat - the factored matrix obtained with `MatGetFactor()`
9360 - b   - the right-hand-side vectors
9361 
9362   Output Parameter:
9363 . x - the result vectors
9364 
9365   Level: developer
9366 
9367   Note:
9368   The vectors `b` and `x` cannot be the same.  I.e., one cannot
9369   call `MatSolves`(A,x,x).
9370 
9371 .seealso: [](ch_matrices), `Mat`, `Vecs`, `MatSolveAdd()`, `MatSolveTranspose()`, `MatSolveTransposeAdd()`, `MatSolve()`
9372 @*/
9373 PetscErrorCode MatSolves(Mat mat, Vecs b, Vecs x)
9374 {
9375   PetscFunctionBegin;
9376   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
9377   PetscValidType(mat, 1);
9378   PetscCheck(x != b, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_IDN, "x and b must be different vectors");
9379   PetscCheck(mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Unfactored matrix");
9380   if (!mat->rmap->N && !mat->cmap->N) PetscFunctionReturn(PETSC_SUCCESS);
9381 
9382   MatCheckPreallocated(mat, 1);
9383   PetscCall(PetscLogEventBegin(MAT_Solves, mat, 0, 0, 0));
9384   PetscUseTypeMethod(mat, solves, b, x);
9385   PetscCall(PetscLogEventEnd(MAT_Solves, mat, 0, 0, 0));
9386   PetscFunctionReturn(PETSC_SUCCESS);
9387 }
9388 
9389 /*@
9390   MatIsSymmetric - Test whether a matrix is symmetric
9391 
9392   Collective
9393 
9394   Input Parameters:
9395 + A   - the matrix to test
9396 - tol - difference between value and its transpose less than this amount counts as equal (use 0.0 for exact transpose)
9397 
9398   Output Parameter:
9399 . flg - the result
9400 
9401   Level: intermediate
9402 
9403   Notes:
9404   For real numbers `MatIsSymmetric()` and `MatIsHermitian()` return identical results
9405 
9406   If the matrix does not yet know if it is symmetric or not this can be an expensive operation, also available `MatIsSymmetricKnown()`
9407 
9408   One can declare that a matrix is symmetric with `MatSetOption`(mat,`MAT_SYMMETRIC`,`PETSC_TRUE`) and if it is known to remain symmetric
9409   after changes to the matrices values one can call `MatSetOption`(mat,`MAT_SYMMETRY_ETERNAL`,`PETSC_TRUE`)
9410 
9411 .seealso: [](ch_matrices), `Mat`, `MatTranspose()`, `MatIsTranspose()`, `MatIsHermitian()`, `MatIsStructurallySymmetric()`, `MatSetOption()`, `MatIsSymmetricKnown()`,
9412           `MAT_SYMMETRIC`, `MAT_SYMMETRY_ETERNAL`
9413 @*/
9414 PetscErrorCode MatIsSymmetric(Mat A, PetscReal tol, PetscBool *flg)
9415 {
9416   PetscFunctionBegin;
9417   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
9418   PetscAssertPointer(flg, 3);
9419   if (A->symmetric != PETSC_BOOL3_UNKNOWN && !tol) *flg = PetscBool3ToBool(A->symmetric);
9420   else {
9421     if (A->ops->issymmetric) PetscUseTypeMethod(A, issymmetric, tol, flg);
9422     else PetscCall(MatIsTranspose(A, A, tol, flg));
9423     if (!tol) PetscCall(MatSetOption(A, MAT_SYMMETRIC, *flg));
9424   }
9425   PetscFunctionReturn(PETSC_SUCCESS);
9426 }
9427 
9428 /*@
9429   MatIsHermitian - Test whether a matrix is Hermitian
9430 
9431   Collective
9432 
9433   Input Parameters:
9434 + A   - the matrix to test
9435 - tol - difference between value and its transpose less than this amount counts as equal (use 0.0 for exact Hermitian)
9436 
9437   Output Parameter:
9438 . flg - the result
9439 
9440   Level: intermediate
9441 
9442   Notes:
9443   For real numbers `MatIsSymmetric()` and `MatIsHermitian()` return identical results
9444 
9445   If the matrix does not yet know if it is Hermitian or not this can be an expensive operation, also available `MatIsHermitianKnown()`
9446 
9447   One can declare that a matrix is Hermitian with `MatSetOption`(mat,`MAT_HERMITIAN`,`PETSC_TRUE`) and if it is known to remain Hermitian
9448   after changes to the matrices values one can call `MatSetOption`(mat,`MAT_SYMEMTRY_ETERNAL`,`PETSC_TRUE`)
9449 
9450 .seealso: [](ch_matrices), `Mat`, `MatTranspose()`, `MatIsTranspose()`, `MatIsHermitianKnown()`, `MatIsStructurallySymmetric()`, `MatSetOption()`,
9451           `MatIsSymmetricKnown()`, `MatIsSymmetric()`, `MAT_HERMITIAN`, `MAT_SYMMETRY_ETERNAL`
9452 @*/
9453 PetscErrorCode MatIsHermitian(Mat A, PetscReal tol, PetscBool *flg)
9454 {
9455   PetscFunctionBegin;
9456   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
9457   PetscAssertPointer(flg, 3);
9458   if (A->hermitian != PETSC_BOOL3_UNKNOWN && !tol) *flg = PetscBool3ToBool(A->hermitian);
9459   else {
9460     if (A->ops->ishermitian) PetscUseTypeMethod(A, ishermitian, tol, flg);
9461     else PetscCall(MatIsHermitianTranspose(A, A, tol, flg));
9462     if (!tol) PetscCall(MatSetOption(A, MAT_HERMITIAN, *flg));
9463   }
9464   PetscFunctionReturn(PETSC_SUCCESS);
9465 }
9466 
9467 /*@
9468   MatIsSymmetricKnown - Checks if a matrix knows if it is symmetric or not and its symmetric state
9469 
9470   Not Collective
9471 
9472   Input Parameter:
9473 . A - the matrix to check
9474 
9475   Output Parameters:
9476 + set - `PETSC_TRUE` if the matrix knows its symmetry state (this tells you if the next flag is valid)
9477 - flg - the result (only valid if set is `PETSC_TRUE`)
9478 
9479   Level: advanced
9480 
9481   Notes:
9482   Does not check the matrix values directly, so this may return unknown (set = `PETSC_FALSE`). Use `MatIsSymmetric()`
9483   if you want it explicitly checked
9484 
9485   One can declare that a matrix is symmetric with `MatSetOption`(mat,`MAT_SYMMETRIC`,`PETSC_TRUE`) and if it is known to remain symmetric
9486   after changes to the matrices values one can call `MatSetOption`(mat,`MAT_SYMMETRY_ETERNAL`,`PETSC_TRUE`)
9487 
9488 .seealso: [](ch_matrices), `Mat`, `MAT_SYMMETRY_ETERNAL`, `MatTranspose()`, `MatIsTranspose()`, `MatIsHermitian()`, `MatIsStructurallySymmetric()`, `MatSetOption()`, `MatIsSymmetric()`, `MatIsHermitianKnown()`
9489 @*/
9490 PetscErrorCode MatIsSymmetricKnown(Mat A, PetscBool *set, PetscBool *flg)
9491 {
9492   PetscFunctionBegin;
9493   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
9494   PetscAssertPointer(set, 2);
9495   PetscAssertPointer(flg, 3);
9496   if (A->symmetric != PETSC_BOOL3_UNKNOWN) {
9497     *set = PETSC_TRUE;
9498     *flg = PetscBool3ToBool(A->symmetric);
9499   } else {
9500     *set = PETSC_FALSE;
9501   }
9502   PetscFunctionReturn(PETSC_SUCCESS);
9503 }
9504 
9505 /*@
9506   MatIsSPDKnown - Checks if a matrix knows if it is symmetric positive definite or not and its symmetric positive definite state
9507 
9508   Not Collective
9509 
9510   Input Parameter:
9511 . A - the matrix to check
9512 
9513   Output Parameters:
9514 + set - `PETSC_TRUE` if the matrix knows its symmetric positive definite state (this tells you if the next flag is valid)
9515 - flg - the result (only valid if set is `PETSC_TRUE`)
9516 
9517   Level: advanced
9518 
9519   Notes:
9520   Does not check the matrix values directly, so this may return unknown (set = `PETSC_FALSE`).
9521 
9522   One can declare that a matrix is SPD with `MatSetOption`(mat,`MAT_SPD`,`PETSC_TRUE`) and if it is known to remain SPD
9523   after changes to the matrices values one can call `MatSetOption`(mat,`MAT_SPD_ETERNAL`,`PETSC_TRUE`)
9524 
9525 .seealso: [](ch_matrices), `Mat`, `MAT_SPD_ETERNAL`, `MAT_SPD`, `MatTranspose()`, `MatIsTranspose()`, `MatIsHermitian()`, `MatIsStructurallySymmetric()`, `MatSetOption()`, `MatIsSymmetric()`, `MatIsHermitianKnown()`
9526 @*/
9527 PetscErrorCode MatIsSPDKnown(Mat A, PetscBool *set, PetscBool *flg)
9528 {
9529   PetscFunctionBegin;
9530   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
9531   PetscAssertPointer(set, 2);
9532   PetscAssertPointer(flg, 3);
9533   if (A->spd != PETSC_BOOL3_UNKNOWN) {
9534     *set = PETSC_TRUE;
9535     *flg = PetscBool3ToBool(A->spd);
9536   } else {
9537     *set = PETSC_FALSE;
9538   }
9539   PetscFunctionReturn(PETSC_SUCCESS);
9540 }
9541 
9542 /*@
9543   MatIsHermitianKnown - Checks if a matrix knows if it is Hermitian or not and its Hermitian state
9544 
9545   Not Collective
9546 
9547   Input Parameter:
9548 . A - the matrix to check
9549 
9550   Output Parameters:
9551 + set - `PETSC_TRUE` if the matrix knows its Hermitian state (this tells you if the next flag is valid)
9552 - flg - the result (only valid if set is `PETSC_TRUE`)
9553 
9554   Level: advanced
9555 
9556   Notes:
9557   Does not check the matrix values directly, so this may return unknown (set = `PETSC_FALSE`). Use `MatIsHermitian()`
9558   if you want it explicitly checked
9559 
9560   One can declare that a matrix is Hermitian with `MatSetOption`(mat,`MAT_HERMITIAN`,`PETSC_TRUE`) and if it is known to remain Hermitian
9561   after changes to the matrices values one can call `MatSetOption`(mat,`MAT_SYMMETRY_ETERNAL`,`PETSC_TRUE`)
9562 
9563 .seealso: [](ch_matrices), `Mat`, `MAT_SYMMETRY_ETERNAL`, `MAT_HERMITIAN`, `MatTranspose()`, `MatIsTranspose()`, `MatIsHermitian()`, `MatIsStructurallySymmetric()`, `MatSetOption()`, `MatIsSymmetric()`
9564 @*/
9565 PetscErrorCode MatIsHermitianKnown(Mat A, PetscBool *set, PetscBool *flg)
9566 {
9567   PetscFunctionBegin;
9568   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
9569   PetscAssertPointer(set, 2);
9570   PetscAssertPointer(flg, 3);
9571   if (A->hermitian != PETSC_BOOL3_UNKNOWN) {
9572     *set = PETSC_TRUE;
9573     *flg = PetscBool3ToBool(A->hermitian);
9574   } else {
9575     *set = PETSC_FALSE;
9576   }
9577   PetscFunctionReturn(PETSC_SUCCESS);
9578 }
9579 
9580 /*@
9581   MatIsStructurallySymmetric - Test whether a matrix is structurally symmetric
9582 
9583   Collective
9584 
9585   Input Parameter:
9586 . A - the matrix to test
9587 
9588   Output Parameter:
9589 . flg - the result
9590 
9591   Level: intermediate
9592 
9593   Notes:
9594   If the matrix does yet know it is structurally symmetric this can be an expensive operation, also available `MatIsStructurallySymmetricKnown()`
9595 
9596   One can declare that a matrix is structurally symmetric with `MatSetOption`(mat,`MAT_STRUCTURALLY_SYMMETRIC`,`PETSC_TRUE`) and if it is known to remain structurally
9597   symmetric after changes to the matrices values one can call `MatSetOption`(mat,`MAT_STRUCTURAL_SYMMETRY_ETERNAL`,`PETSC_TRUE`)
9598 
9599 .seealso: [](ch_matrices), `Mat`, `MAT_STRUCTURALLY_SYMMETRIC`, `MAT_STRUCTURAL_SYMMETRY_ETERNAL`, `MatTranspose()`, `MatIsTranspose()`, `MatIsHermitian()`, `MatIsSymmetric()`, `MatSetOption()`, `MatIsStructurallySymmetricKnown()`
9600 @*/
9601 PetscErrorCode MatIsStructurallySymmetric(Mat A, PetscBool *flg)
9602 {
9603   PetscFunctionBegin;
9604   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
9605   PetscAssertPointer(flg, 2);
9606   if (A->structurally_symmetric != PETSC_BOOL3_UNKNOWN) {
9607     *flg = PetscBool3ToBool(A->structurally_symmetric);
9608   } else {
9609     PetscUseTypeMethod(A, isstructurallysymmetric, flg);
9610     PetscCall(MatSetOption(A, MAT_STRUCTURALLY_SYMMETRIC, *flg));
9611   }
9612   PetscFunctionReturn(PETSC_SUCCESS);
9613 }
9614 
9615 /*@
9616   MatIsStructurallySymmetricKnown - Checks if a matrix knows if it is structurally symmetric or not and its structurally symmetric state
9617 
9618   Not Collective
9619 
9620   Input Parameter:
9621 . A - the matrix to check
9622 
9623   Output Parameters:
9624 + set - PETSC_TRUE if the matrix knows its structurally symmetric state (this tells you if the next flag is valid)
9625 - flg - the result (only valid if set is PETSC_TRUE)
9626 
9627   Level: advanced
9628 
9629   Notes:
9630   One can declare that a matrix is structurally symmetric with `MatSetOption`(mat,`MAT_STRUCTURALLY_SYMMETRIC`,`PETSC_TRUE`) and if it is known to remain structurally
9631   symmetric after changes to the matrices values one can call `MatSetOption`(mat,`MAT_STRUCTURAL_SYMMETRY_ETERNAL`,`PETSC_TRUE`)
9632 
9633   Use `MatIsStructurallySymmetric()` to explicitly check if a matrix is structurally symmetric (this is an expensive operation)
9634 
9635 .seealso: [](ch_matrices), `Mat`, `MAT_STRUCTURALLY_SYMMETRIC`, `MatTranspose()`, `MatIsTranspose()`, `MatIsHermitian()`, `MatIsStructurallySymmetric()`, `MatSetOption()`, `MatIsSymmetric()`, `MatIsHermitianKnown()`
9636 @*/
9637 PetscErrorCode MatIsStructurallySymmetricKnown(Mat A, PetscBool *set, PetscBool *flg)
9638 {
9639   PetscFunctionBegin;
9640   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
9641   PetscAssertPointer(set, 2);
9642   PetscAssertPointer(flg, 3);
9643   if (A->structurally_symmetric != PETSC_BOOL3_UNKNOWN) {
9644     *set = PETSC_TRUE;
9645     *flg = PetscBool3ToBool(A->structurally_symmetric);
9646   } else {
9647     *set = PETSC_FALSE;
9648   }
9649   PetscFunctionReturn(PETSC_SUCCESS);
9650 }
9651 
9652 /*@
9653   MatStashGetInfo - Gets how many values are currently in the matrix stash, i.e. need
9654   to be communicated to other processors during the `MatAssemblyBegin()`/`MatAssemblyEnd()` process
9655 
9656   Not Collective
9657 
9658   Input Parameter:
9659 . mat - the matrix
9660 
9661   Output Parameters:
9662 + nstash    - the size of the stash
9663 . reallocs  - the number of additional mallocs incurred.
9664 . bnstash   - the size of the block stash
9665 - breallocs - the number of additional mallocs incurred.in the block stash
9666 
9667   Level: advanced
9668 
9669 .seealso: [](ch_matrices), `MatAssemblyBegin()`, `MatAssemblyEnd()`, `Mat`, `MatStashSetInitialSize()`
9670 @*/
9671 PetscErrorCode MatStashGetInfo(Mat mat, PetscInt *nstash, PetscInt *reallocs, PetscInt *bnstash, PetscInt *breallocs)
9672 {
9673   PetscFunctionBegin;
9674   PetscCall(MatStashGetInfo_Private(&mat->stash, nstash, reallocs));
9675   PetscCall(MatStashGetInfo_Private(&mat->bstash, bnstash, breallocs));
9676   PetscFunctionReturn(PETSC_SUCCESS);
9677 }
9678 
9679 /*@
9680   MatCreateVecs - Get vector(s) compatible with the matrix, i.e. with the same
9681   parallel layout, `PetscLayout` for rows and columns
9682 
9683   Collective
9684 
9685   Input Parameter:
9686 . mat - the matrix
9687 
9688   Output Parameters:
9689 + right - (optional) vector that the matrix can be multiplied against
9690 - left  - (optional) vector that the matrix vector product can be stored in
9691 
9692   Level: advanced
9693 
9694   Notes:
9695   The blocksize of the returned vectors is determined by the row and column block sizes set with `MatSetBlockSizes()` or the single blocksize (same for both) set by `MatSetBlockSize()`.
9696 
9697   These are new vectors which are not owned by the mat, they should be destroyed in `VecDestroy()` when no longer needed
9698 
9699 .seealso: [](ch_matrices), `Mat`, `Vec`, `VecCreate()`, `VecDestroy()`, `DMCreateGlobalVector()`
9700 @*/
9701 PetscErrorCode MatCreateVecs(Mat mat, Vec *right, Vec *left)
9702 {
9703   PetscFunctionBegin;
9704   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
9705   PetscValidType(mat, 1);
9706   if (mat->ops->getvecs) {
9707     PetscUseTypeMethod(mat, getvecs, right, left);
9708   } else {
9709     if (right) {
9710       PetscCheck(mat->cmap->n >= 0, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "PetscLayout for columns not yet setup");
9711       PetscCall(VecCreateWithLayout_Private(mat->cmap, right));
9712       PetscCall(VecSetType(*right, mat->defaultvectype));
9713 #if defined(PETSC_HAVE_VIENNACL) || defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP)
9714       if (mat->boundtocpu && mat->bindingpropagates) {
9715         PetscCall(VecSetBindingPropagates(*right, PETSC_TRUE));
9716         PetscCall(VecBindToCPU(*right, PETSC_TRUE));
9717       }
9718 #endif
9719     }
9720     if (left) {
9721       PetscCheck(mat->rmap->n >= 0, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "PetscLayout for rows not yet setup");
9722       PetscCall(VecCreateWithLayout_Private(mat->rmap, left));
9723       PetscCall(VecSetType(*left, mat->defaultvectype));
9724 #if defined(PETSC_HAVE_VIENNACL) || defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP)
9725       if (mat->boundtocpu && mat->bindingpropagates) {
9726         PetscCall(VecSetBindingPropagates(*left, PETSC_TRUE));
9727         PetscCall(VecBindToCPU(*left, PETSC_TRUE));
9728       }
9729 #endif
9730     }
9731   }
9732   PetscFunctionReturn(PETSC_SUCCESS);
9733 }
9734 
9735 /*@
9736   MatFactorInfoInitialize - Initializes a `MatFactorInfo` data structure
9737   with default values.
9738 
9739   Not Collective
9740 
9741   Input Parameter:
9742 . info - the `MatFactorInfo` data structure
9743 
9744   Level: developer
9745 
9746   Notes:
9747   The solvers are generally used through the `KSP` and `PC` objects, for example
9748   `PCLU`, `PCILU`, `PCCHOLESKY`, `PCICC`
9749 
9750   Once the data structure is initialized one may change certain entries as desired for the particular factorization to be performed
9751 
9752 .seealso: [](ch_matrices), `Mat`, `MatGetFactor()`, `MatFactorInfo`
9753 @*/
9754 PetscErrorCode MatFactorInfoInitialize(MatFactorInfo *info)
9755 {
9756   PetscFunctionBegin;
9757   PetscCall(PetscMemzero(info, sizeof(MatFactorInfo)));
9758   PetscFunctionReturn(PETSC_SUCCESS);
9759 }
9760 
9761 /*@
9762   MatFactorSetSchurIS - Set indices corresponding to the Schur complement you wish to have computed
9763 
9764   Collective
9765 
9766   Input Parameters:
9767 + mat - the factored matrix
9768 - is  - the index set defining the Schur indices (0-based)
9769 
9770   Level: advanced
9771 
9772   Notes:
9773   Call `MatFactorSolveSchurComplement()` or `MatFactorSolveSchurComplementTranspose()` after this call to solve a Schur complement system.
9774 
9775   You can call `MatFactorGetSchurComplement()` or `MatFactorCreateSchurComplement()` after this call.
9776 
9777   This functionality is only supported for `MATSOLVERMUMPS` and `MATSOLVERMKL_PARDISO`
9778 
9779 .seealso: [](ch_matrices), `Mat`, `MatGetFactor()`, `MatFactorGetSchurComplement()`, `MatFactorRestoreSchurComplement()`, `MatFactorCreateSchurComplement()`, `MatFactorSolveSchurComplement()`,
9780           `MatFactorSolveSchurComplementTranspose()`, `MATSOLVERMUMPS`, `MATSOLVERMKL_PARDISO`
9781 @*/
9782 PetscErrorCode MatFactorSetSchurIS(Mat mat, IS is)
9783 {
9784   PetscErrorCode (*f)(Mat, IS);
9785 
9786   PetscFunctionBegin;
9787   PetscValidType(mat, 1);
9788   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
9789   PetscValidType(is, 2);
9790   PetscValidHeaderSpecific(is, IS_CLASSID, 2);
9791   PetscCheckSameComm(mat, 1, is, 2);
9792   PetscCheck(mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Only for factored matrix");
9793   PetscCall(PetscObjectQueryFunction((PetscObject)mat, "MatFactorSetSchurIS_C", &f));
9794   PetscCheck(f, PetscObjectComm((PetscObject)mat), PETSC_ERR_SUP, "The selected MatSolverType does not support Schur complement computation. You should use MATSOLVERMUMPS or MATSOLVERMKL_PARDISO");
9795   PetscCall(MatDestroy(&mat->schur));
9796   PetscCall((*f)(mat, is));
9797   PetscCheck(mat->schur, PetscObjectComm((PetscObject)mat), PETSC_ERR_PLIB, "Schur complement has not been created");
9798   PetscFunctionReturn(PETSC_SUCCESS);
9799 }
9800 
9801 /*@
9802   MatFactorCreateSchurComplement - Create a Schur complement matrix object using Schur data computed during the factorization step
9803 
9804   Logically Collective
9805 
9806   Input Parameters:
9807 + F      - the factored matrix obtained by calling `MatGetFactor()`
9808 . S      - location where to return the Schur complement, can be `NULL`
9809 - status - the status of the Schur complement matrix, can be `NULL`
9810 
9811   Level: advanced
9812 
9813   Notes:
9814   You must call `MatFactorSetSchurIS()` before calling this routine.
9815 
9816   This functionality is only supported for `MATSOLVERMUMPS` and `MATSOLVERMKL_PARDISO`
9817 
9818   The routine provides a copy of the Schur matrix stored within the solver data structures.
9819   The caller must destroy the object when it is no longer needed.
9820   If `MatFactorInvertSchurComplement()` has been called, the routine gets back the inverse.
9821 
9822   Use `MatFactorGetSchurComplement()` to get access to the Schur complement matrix inside the factored matrix instead of making a copy of it (which this function does)
9823 
9824   See `MatCreateSchurComplement()` or `MatGetSchurComplement()` for ways to create virtual or approximate Schur complements.
9825 
9826   Developer Note:
9827   The reason this routine exists is because the representation of the Schur complement within the factor matrix may be different than a standard PETSc
9828   matrix representation and we normally do not want to use the time or memory to make a copy as a regular PETSc matrix.
9829 
9830 .seealso: [](ch_matrices), `Mat`, `MatGetFactor()`, `MatFactorSetSchurIS()`, `MatFactorGetSchurComplement()`, `MatFactorSchurStatus`, `MATSOLVERMUMPS`, `MATSOLVERMKL_PARDISO`
9831 @*/
9832 PetscErrorCode MatFactorCreateSchurComplement(Mat F, Mat *S, MatFactorSchurStatus *status)
9833 {
9834   PetscFunctionBegin;
9835   PetscValidHeaderSpecific(F, MAT_CLASSID, 1);
9836   if (S) PetscAssertPointer(S, 2);
9837   if (status) PetscAssertPointer(status, 3);
9838   if (S) {
9839     PetscErrorCode (*f)(Mat, Mat *);
9840 
9841     PetscCall(PetscObjectQueryFunction((PetscObject)F, "MatFactorCreateSchurComplement_C", &f));
9842     if (f) {
9843       PetscCall((*f)(F, S));
9844     } else {
9845       PetscCall(MatDuplicate(F->schur, MAT_COPY_VALUES, S));
9846     }
9847   }
9848   if (status) *status = F->schur_status;
9849   PetscFunctionReturn(PETSC_SUCCESS);
9850 }
9851 
9852 /*@
9853   MatFactorGetSchurComplement - Gets access to a Schur complement matrix using the current Schur data within a factored matrix
9854 
9855   Logically Collective
9856 
9857   Input Parameters:
9858 + F      - the factored matrix obtained by calling `MatGetFactor()`
9859 . S      - location where to return the Schur complement, can be `NULL`
9860 - status - the status of the Schur complement matrix, can be `NULL`
9861 
9862   Level: advanced
9863 
9864   Notes:
9865   You must call `MatFactorSetSchurIS()` before calling this routine.
9866 
9867   Schur complement mode is currently implemented for sequential matrices with factor type of `MATSOLVERMUMPS`
9868 
9869   The routine returns a the Schur Complement stored within the data structures of the solver.
9870 
9871   If `MatFactorInvertSchurComplement()` has previously been called, the returned matrix is actually the inverse of the Schur complement.
9872 
9873   The returned matrix should not be destroyed; the caller should call `MatFactorRestoreSchurComplement()` when the object is no longer needed.
9874 
9875   Use `MatFactorCreateSchurComplement()` to create a copy of the Schur complement matrix that is within a factored matrix
9876 
9877   See `MatCreateSchurComplement()` or `MatGetSchurComplement()` for ways to create virtual or approximate Schur complements.
9878 
9879 .seealso: [](ch_matrices), `Mat`, `MatGetFactor()`, `MatFactorSetSchurIS()`, `MatFactorRestoreSchurComplement()`, `MatFactorCreateSchurComplement()`, `MatFactorSchurStatus`
9880 @*/
9881 PetscErrorCode MatFactorGetSchurComplement(Mat F, Mat *S, MatFactorSchurStatus *status)
9882 {
9883   PetscFunctionBegin;
9884   PetscValidHeaderSpecific(F, MAT_CLASSID, 1);
9885   if (S) {
9886     PetscAssertPointer(S, 2);
9887     *S = F->schur;
9888   }
9889   if (status) {
9890     PetscAssertPointer(status, 3);
9891     *status = F->schur_status;
9892   }
9893   PetscFunctionReturn(PETSC_SUCCESS);
9894 }
9895 
9896 static PetscErrorCode MatFactorUpdateSchurStatus_Private(Mat F)
9897 {
9898   Mat S = F->schur;
9899 
9900   PetscFunctionBegin;
9901   switch (F->schur_status) {
9902   case MAT_FACTOR_SCHUR_UNFACTORED: // fall-through
9903   case MAT_FACTOR_SCHUR_INVERTED:
9904     if (S) {
9905       S->ops->solve             = NULL;
9906       S->ops->matsolve          = NULL;
9907       S->ops->solvetranspose    = NULL;
9908       S->ops->matsolvetranspose = NULL;
9909       S->ops->solveadd          = NULL;
9910       S->ops->solvetransposeadd = NULL;
9911       S->factortype             = MAT_FACTOR_NONE;
9912       PetscCall(PetscFree(S->solvertype));
9913     }
9914   case MAT_FACTOR_SCHUR_FACTORED: // fall-through
9915     break;
9916   default:
9917     SETERRQ(PetscObjectComm((PetscObject)F), PETSC_ERR_SUP, "Unhandled MatFactorSchurStatus %d", F->schur_status);
9918   }
9919   PetscFunctionReturn(PETSC_SUCCESS);
9920 }
9921 
9922 /*@
9923   MatFactorRestoreSchurComplement - Restore the Schur complement matrix object obtained from a call to `MatFactorGetSchurComplement()`
9924 
9925   Logically Collective
9926 
9927   Input Parameters:
9928 + F      - the factored matrix obtained by calling `MatGetFactor()`
9929 . S      - location where the Schur complement is stored
9930 - status - the status of the Schur complement matrix (see `MatFactorSchurStatus`)
9931 
9932   Level: advanced
9933 
9934 .seealso: [](ch_matrices), `Mat`, `MatGetFactor()`, `MatFactorSetSchurIS()`, `MatFactorCreateSchurComplement()`, `MatFactorSchurStatus`
9935 @*/
9936 PetscErrorCode MatFactorRestoreSchurComplement(Mat F, Mat *S, MatFactorSchurStatus status)
9937 {
9938   PetscFunctionBegin;
9939   PetscValidHeaderSpecific(F, MAT_CLASSID, 1);
9940   if (S) {
9941     PetscValidHeaderSpecific(*S, MAT_CLASSID, 2);
9942     *S = NULL;
9943   }
9944   F->schur_status = status;
9945   PetscCall(MatFactorUpdateSchurStatus_Private(F));
9946   PetscFunctionReturn(PETSC_SUCCESS);
9947 }
9948 
9949 /*@
9950   MatFactorSolveSchurComplementTranspose - Solve the transpose of the Schur complement system computed during the factorization step
9951 
9952   Logically Collective
9953 
9954   Input Parameters:
9955 + F   - the factored matrix obtained by calling `MatGetFactor()`
9956 . rhs - location where the right-hand side of the Schur complement system is stored
9957 - sol - location where the solution of the Schur complement system has to be returned
9958 
9959   Level: advanced
9960 
9961   Notes:
9962   The sizes of the vectors should match the size of the Schur complement
9963 
9964   Must be called after `MatFactorSetSchurIS()`
9965 
9966 .seealso: [](ch_matrices), `Mat`, `MatGetFactor()`, `MatFactorSetSchurIS()`, `MatFactorSolveSchurComplement()`
9967 @*/
9968 PetscErrorCode MatFactorSolveSchurComplementTranspose(Mat F, Vec rhs, Vec sol)
9969 {
9970   PetscFunctionBegin;
9971   PetscValidType(F, 1);
9972   PetscValidType(rhs, 2);
9973   PetscValidType(sol, 3);
9974   PetscValidHeaderSpecific(F, MAT_CLASSID, 1);
9975   PetscValidHeaderSpecific(rhs, VEC_CLASSID, 2);
9976   PetscValidHeaderSpecific(sol, VEC_CLASSID, 3);
9977   PetscCheckSameComm(F, 1, rhs, 2);
9978   PetscCheckSameComm(F, 1, sol, 3);
9979   PetscCall(MatFactorFactorizeSchurComplement(F));
9980   switch (F->schur_status) {
9981   case MAT_FACTOR_SCHUR_FACTORED:
9982     PetscCall(MatSolveTranspose(F->schur, rhs, sol));
9983     break;
9984   case MAT_FACTOR_SCHUR_INVERTED:
9985     PetscCall(MatMultTranspose(F->schur, rhs, sol));
9986     break;
9987   default:
9988     SETERRQ(PetscObjectComm((PetscObject)F), PETSC_ERR_SUP, "Unhandled MatFactorSchurStatus %d", F->schur_status);
9989   }
9990   PetscFunctionReturn(PETSC_SUCCESS);
9991 }
9992 
9993 /*@
9994   MatFactorSolveSchurComplement - Solve the Schur complement system computed during the factorization step
9995 
9996   Logically Collective
9997 
9998   Input Parameters:
9999 + F   - the factored matrix obtained by calling `MatGetFactor()`
10000 . rhs - location where the right-hand side of the Schur complement system is stored
10001 - sol - location where the solution of the Schur complement system has to be returned
10002 
10003   Level: advanced
10004 
10005   Notes:
10006   The sizes of the vectors should match the size of the Schur complement
10007 
10008   Must be called after `MatFactorSetSchurIS()`
10009 
10010 .seealso: [](ch_matrices), `Mat`, `MatGetFactor()`, `MatFactorSetSchurIS()`, `MatFactorSolveSchurComplementTranspose()`
10011 @*/
10012 PetscErrorCode MatFactorSolveSchurComplement(Mat F, Vec rhs, Vec sol)
10013 {
10014   PetscFunctionBegin;
10015   PetscValidType(F, 1);
10016   PetscValidType(rhs, 2);
10017   PetscValidType(sol, 3);
10018   PetscValidHeaderSpecific(F, MAT_CLASSID, 1);
10019   PetscValidHeaderSpecific(rhs, VEC_CLASSID, 2);
10020   PetscValidHeaderSpecific(sol, VEC_CLASSID, 3);
10021   PetscCheckSameComm(F, 1, rhs, 2);
10022   PetscCheckSameComm(F, 1, sol, 3);
10023   PetscCall(MatFactorFactorizeSchurComplement(F));
10024   switch (F->schur_status) {
10025   case MAT_FACTOR_SCHUR_FACTORED:
10026     PetscCall(MatSolve(F->schur, rhs, sol));
10027     break;
10028   case MAT_FACTOR_SCHUR_INVERTED:
10029     PetscCall(MatMult(F->schur, rhs, sol));
10030     break;
10031   default:
10032     SETERRQ(PetscObjectComm((PetscObject)F), PETSC_ERR_SUP, "Unhandled MatFactorSchurStatus %d", F->schur_status);
10033   }
10034   PetscFunctionReturn(PETSC_SUCCESS);
10035 }
10036 
10037 PETSC_EXTERN PetscErrorCode MatSeqDenseInvertFactors_Private(Mat);
10038 #if PetscDefined(HAVE_CUDA)
10039 PETSC_SINGLE_LIBRARY_INTERN PetscErrorCode MatSeqDenseCUDAInvertFactors_Internal(Mat);
10040 #endif
10041 
10042 /* Schur status updated in the interface */
10043 static PetscErrorCode MatFactorInvertSchurComplement_Private(Mat F)
10044 {
10045   Mat S = F->schur;
10046 
10047   PetscFunctionBegin;
10048   if (S) {
10049     PetscMPIInt size;
10050     PetscBool   isdense, isdensecuda;
10051 
10052     PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)S), &size));
10053     PetscCheck(size <= 1, PetscObjectComm((PetscObject)S), PETSC_ERR_SUP, "Not yet implemented");
10054     PetscCall(PetscObjectTypeCompare((PetscObject)S, MATSEQDENSE, &isdense));
10055     PetscCall(PetscObjectTypeCompare((PetscObject)S, MATSEQDENSECUDA, &isdensecuda));
10056     PetscCheck(isdense || isdensecuda, PetscObjectComm((PetscObject)S), PETSC_ERR_SUP, "Not implemented for type %s", ((PetscObject)S)->type_name);
10057     PetscCall(PetscLogEventBegin(MAT_FactorInvS, F, 0, 0, 0));
10058     if (isdense) {
10059       PetscCall(MatSeqDenseInvertFactors_Private(S));
10060     } else if (isdensecuda) {
10061 #if defined(PETSC_HAVE_CUDA)
10062       PetscCall(MatSeqDenseCUDAInvertFactors_Internal(S));
10063 #endif
10064     }
10065     // HIP??????????????
10066     PetscCall(PetscLogEventEnd(MAT_FactorInvS, F, 0, 0, 0));
10067   }
10068   PetscFunctionReturn(PETSC_SUCCESS);
10069 }
10070 
10071 /*@
10072   MatFactorInvertSchurComplement - Invert the Schur complement matrix computed during the factorization step
10073 
10074   Logically Collective
10075 
10076   Input Parameter:
10077 . F - the factored matrix obtained by calling `MatGetFactor()`
10078 
10079   Level: advanced
10080 
10081   Notes:
10082   Must be called after `MatFactorSetSchurIS()`.
10083 
10084   Call `MatFactorGetSchurComplement()` or  `MatFactorCreateSchurComplement()` AFTER this call to actually compute the inverse and get access to it.
10085 
10086 .seealso: [](ch_matrices), `Mat`, `MatGetFactor()`, `MatFactorSetSchurIS()`, `MatFactorGetSchurComplement()`, `MatFactorCreateSchurComplement()`
10087 @*/
10088 PetscErrorCode MatFactorInvertSchurComplement(Mat F)
10089 {
10090   PetscFunctionBegin;
10091   PetscValidType(F, 1);
10092   PetscValidHeaderSpecific(F, MAT_CLASSID, 1);
10093   if (F->schur_status == MAT_FACTOR_SCHUR_INVERTED) PetscFunctionReturn(PETSC_SUCCESS);
10094   PetscCall(MatFactorFactorizeSchurComplement(F));
10095   PetscCall(MatFactorInvertSchurComplement_Private(F));
10096   F->schur_status = MAT_FACTOR_SCHUR_INVERTED;
10097   PetscFunctionReturn(PETSC_SUCCESS);
10098 }
10099 
10100 /*@
10101   MatFactorFactorizeSchurComplement - Factorize the Schur complement matrix computed during the factorization step
10102 
10103   Logically Collective
10104 
10105   Input Parameter:
10106 . F - the factored matrix obtained by calling `MatGetFactor()`
10107 
10108   Level: advanced
10109 
10110   Note:
10111   Must be called after `MatFactorSetSchurIS()`
10112 
10113 .seealso: [](ch_matrices), `Mat`, `MatGetFactor()`, `MatFactorSetSchurIS()`, `MatFactorInvertSchurComplement()`
10114 @*/
10115 PetscErrorCode MatFactorFactorizeSchurComplement(Mat F)
10116 {
10117   MatFactorInfo info;
10118 
10119   PetscFunctionBegin;
10120   PetscValidType(F, 1);
10121   PetscValidHeaderSpecific(F, MAT_CLASSID, 1);
10122   if (F->schur_status == MAT_FACTOR_SCHUR_INVERTED || F->schur_status == MAT_FACTOR_SCHUR_FACTORED) PetscFunctionReturn(PETSC_SUCCESS);
10123   PetscCall(PetscLogEventBegin(MAT_FactorFactS, F, 0, 0, 0));
10124   PetscCall(PetscMemzero(&info, sizeof(MatFactorInfo)));
10125   if (F->factortype == MAT_FACTOR_CHOLESKY) { /* LDL^t regarded as Cholesky */
10126     PetscCall(MatCholeskyFactor(F->schur, NULL, &info));
10127   } else {
10128     PetscCall(MatLUFactor(F->schur, NULL, NULL, &info));
10129   }
10130   PetscCall(PetscLogEventEnd(MAT_FactorFactS, F, 0, 0, 0));
10131   F->schur_status = MAT_FACTOR_SCHUR_FACTORED;
10132   PetscFunctionReturn(PETSC_SUCCESS);
10133 }
10134 
10135 /*@
10136   MatPtAP - Creates the matrix product $C = P^T * A * P$
10137 
10138   Neighbor-wise Collective
10139 
10140   Input Parameters:
10141 + A     - the matrix
10142 . P     - the projection matrix
10143 . scall - either `MAT_INITIAL_MATRIX` or `MAT_REUSE_MATRIX`
10144 - fill  - expected fill as ratio of nnz(C)/(nnz(A) + nnz(P)), use `PETSC_DETERMINE` or `PETSC_CURRENT` if you do not have a good estimate
10145           if the result is a dense matrix this is irrelevant
10146 
10147   Output Parameter:
10148 . C - the product matrix
10149 
10150   Level: intermediate
10151 
10152   Notes:
10153   C will be created and must be destroyed by the user with `MatDestroy()`.
10154 
10155   An alternative approach to this function is to use `MatProductCreate()` and set the desired options before the computation is done
10156 
10157   The deprecated `PETSC_DEFAULT` in `fill` also means use the current value
10158 
10159   Developer Note:
10160   For matrix types without special implementation the function fallbacks to `MatMatMult()` followed by `MatTransposeMatMult()`.
10161 
10162 .seealso: [](ch_matrices), `Mat`, `MatProductCreate()`, `MatMatMult()`, `MatRARt()`
10163 @*/
10164 PetscErrorCode MatPtAP(Mat A, Mat P, MatReuse scall, PetscReal fill, Mat *C)
10165 {
10166   PetscFunctionBegin;
10167   if (scall == MAT_REUSE_MATRIX) MatCheckProduct(*C, 5);
10168   PetscCheck(scall != MAT_INPLACE_MATRIX, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Inplace product not supported");
10169 
10170   if (scall == MAT_INITIAL_MATRIX) {
10171     PetscCall(MatProductCreate(A, P, NULL, C));
10172     PetscCall(MatProductSetType(*C, MATPRODUCT_PtAP));
10173     PetscCall(MatProductSetAlgorithm(*C, "default"));
10174     PetscCall(MatProductSetFill(*C, fill));
10175 
10176     (*C)->product->api_user = PETSC_TRUE;
10177     PetscCall(MatProductSetFromOptions(*C));
10178     PetscCheck((*C)->ops->productsymbolic, PetscObjectComm((PetscObject)*C), PETSC_ERR_SUP, "MatProduct %s not supported for A %s and P %s", MatProductTypes[MATPRODUCT_PtAP], ((PetscObject)A)->type_name, ((PetscObject)P)->type_name);
10179     PetscCall(MatProductSymbolic(*C));
10180   } else { /* scall == MAT_REUSE_MATRIX */
10181     PetscCall(MatProductReplaceMats(A, P, NULL, *C));
10182   }
10183 
10184   PetscCall(MatProductNumeric(*C));
10185   (*C)->symmetric = A->symmetric;
10186   (*C)->spd       = A->spd;
10187   PetscFunctionReturn(PETSC_SUCCESS);
10188 }
10189 
10190 /*@
10191   MatRARt - Creates the matrix product $C = R * A * R^T$
10192 
10193   Neighbor-wise Collective
10194 
10195   Input Parameters:
10196 + A     - the matrix
10197 . R     - the projection matrix
10198 . scall - either `MAT_INITIAL_MATRIX` or `MAT_REUSE_MATRIX`
10199 - fill  - expected fill as ratio of nnz(C)/nnz(A), use `PETSC_DETERMINE` or `PETSC_CURRENT` if you do not have a good estimate
10200           if the result is a dense matrix this is irrelevant
10201 
10202   Output Parameter:
10203 . C - the product matrix
10204 
10205   Level: intermediate
10206 
10207   Notes:
10208   `C` will be created and must be destroyed by the user with `MatDestroy()`.
10209 
10210   An alternative approach to this function is to use `MatProductCreate()` and set the desired options before the computation is done
10211 
10212   This routine is currently only implemented for pairs of `MATAIJ` matrices and classes
10213   which inherit from `MATAIJ`. Due to PETSc sparse matrix block row distribution among processes,
10214   parallel `MatRARt()` is implemented via explicit transpose of `R`, which could be very expensive.
10215   We recommend using `MatPtAP()`.
10216 
10217   The deprecated `PETSC_DEFAULT` in `fill` also means use the current value
10218 
10219 .seealso: [](ch_matrices), `Mat`, `MatProductCreate()`, `MatMatMult()`, `MatPtAP()`
10220 @*/
10221 PetscErrorCode MatRARt(Mat A, Mat R, MatReuse scall, PetscReal fill, Mat *C)
10222 {
10223   PetscFunctionBegin;
10224   if (scall == MAT_REUSE_MATRIX) MatCheckProduct(*C, 5);
10225   PetscCheck(scall != MAT_INPLACE_MATRIX, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Inplace product not supported");
10226 
10227   if (scall == MAT_INITIAL_MATRIX) {
10228     PetscCall(MatProductCreate(A, R, NULL, C));
10229     PetscCall(MatProductSetType(*C, MATPRODUCT_RARt));
10230     PetscCall(MatProductSetAlgorithm(*C, "default"));
10231     PetscCall(MatProductSetFill(*C, fill));
10232 
10233     (*C)->product->api_user = PETSC_TRUE;
10234     PetscCall(MatProductSetFromOptions(*C));
10235     PetscCheck((*C)->ops->productsymbolic, PetscObjectComm((PetscObject)*C), PETSC_ERR_SUP, "MatProduct %s not supported for A %s and R %s", MatProductTypes[MATPRODUCT_RARt], ((PetscObject)A)->type_name, ((PetscObject)R)->type_name);
10236     PetscCall(MatProductSymbolic(*C));
10237   } else { /* scall == MAT_REUSE_MATRIX */
10238     PetscCall(MatProductReplaceMats(A, R, NULL, *C));
10239   }
10240 
10241   PetscCall(MatProductNumeric(*C));
10242   if (A->symmetric == PETSC_BOOL3_TRUE) PetscCall(MatSetOption(*C, MAT_SYMMETRIC, PETSC_TRUE));
10243   PetscFunctionReturn(PETSC_SUCCESS);
10244 }
10245 
10246 static PetscErrorCode MatProduct_Private(Mat A, Mat B, MatReuse scall, PetscReal fill, MatProductType ptype, Mat *C)
10247 {
10248   PetscBool flg = PETSC_TRUE;
10249 
10250   PetscFunctionBegin;
10251   PetscCheck(scall != MAT_INPLACE_MATRIX, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "MAT_INPLACE_MATRIX product not supported");
10252   if (scall == MAT_INITIAL_MATRIX) {
10253     PetscCall(PetscInfo(A, "Calling MatProduct API with MAT_INITIAL_MATRIX and product type %s\n", MatProductTypes[ptype]));
10254     PetscCall(MatProductCreate(A, B, NULL, C));
10255     PetscCall(MatProductSetAlgorithm(*C, MATPRODUCTALGORITHMDEFAULT));
10256     PetscCall(MatProductSetFill(*C, fill));
10257   } else { /* scall == MAT_REUSE_MATRIX */
10258     Mat_Product *product = (*C)->product;
10259 
10260     PetscCall(PetscObjectBaseTypeCompareAny((PetscObject)*C, &flg, MATSEQDENSE, MATMPIDENSE, ""));
10261     if (flg && product && product->type != ptype) {
10262       PetscCall(MatProductClear(*C));
10263       product = NULL;
10264     }
10265     PetscCall(PetscInfo(A, "Calling MatProduct API with MAT_REUSE_MATRIX %s product present and product type %s\n", product ? "with" : "without", MatProductTypes[ptype]));
10266     if (!product) { /* user provide the dense matrix *C without calling MatProductCreate() or reusing it from previous calls */
10267       PetscCheck(flg, PetscObjectComm((PetscObject)*C), PETSC_ERR_SUP, "Call MatProductCreate() first");
10268       PetscCall(MatProductCreate_Private(A, B, NULL, *C));
10269       product        = (*C)->product;
10270       product->fill  = fill;
10271       product->clear = PETSC_TRUE;
10272     } else { /* user may change input matrices A or B when MAT_REUSE_MATRIX */
10273       flg = PETSC_FALSE;
10274       PetscCall(MatProductReplaceMats(A, B, NULL, *C));
10275     }
10276   }
10277   if (flg) {
10278     (*C)->product->api_user = PETSC_TRUE;
10279     PetscCall(MatProductSetType(*C, ptype));
10280     PetscCall(MatProductSetFromOptions(*C));
10281     PetscCall(MatProductSymbolic(*C));
10282   }
10283   PetscCall(MatProductNumeric(*C));
10284   PetscFunctionReturn(PETSC_SUCCESS);
10285 }
10286 
10287 /*@
10288   MatMatMult - Performs matrix-matrix multiplication C=A*B.
10289 
10290   Neighbor-wise Collective
10291 
10292   Input Parameters:
10293 + A     - the left matrix
10294 . B     - the right matrix
10295 . scall - either `MAT_INITIAL_MATRIX` or `MAT_REUSE_MATRIX`
10296 - fill  - expected fill as ratio of nnz(C)/(nnz(A) + nnz(B)), use `PETSC_DETERMINE` or `PETSC_CURRENT` if you do not have a good estimate
10297           if the result is a dense matrix this is irrelevant
10298 
10299   Output Parameter:
10300 . C - the product matrix
10301 
10302   Notes:
10303   Unless scall is `MAT_REUSE_MATRIX` C will be created.
10304 
10305   `MAT_REUSE_MATRIX` can only be used if the matrices A and B have the same nonzero pattern as in the previous call and C was obtained from a previous
10306   call to this function with `MAT_INITIAL_MATRIX`.
10307 
10308   To determine the correct fill value, run with `-info` and search for the string "Fill ratio" to see the value actually needed.
10309 
10310   In the special case where matrix `B` (and hence `C`) are dense you can create the correctly sized matrix `C` yourself and then call this routine with `MAT_REUSE_MATRIX`,
10311   rather than first having `MatMatMult()` create it for you. You can NEVER do this if the matrix `C` is sparse.
10312 
10313   The deprecated `PETSC_DEFAULT` in `fill` also means use the current value
10314 
10315   Example of Usage:
10316 .vb
10317      MatProductCreate(A,B,NULL,&C);
10318      MatProductSetType(C,MATPRODUCT_AB);
10319      MatProductSymbolic(C);
10320      MatProductNumeric(C); // compute C=A * B
10321      MatProductReplaceMats(A1,B1,NULL,C); // compute C=A1 * B1
10322      MatProductNumeric(C);
10323      MatProductReplaceMats(A2,NULL,NULL,C); // compute C=A2 * B1
10324      MatProductNumeric(C);
10325 .ve
10326 
10327   Level: intermediate
10328 
10329 .seealso: [](ch_matrices), `Mat`, `MatProductType`, `MATPRODUCT_AB`, `MatTransposeMatMult()`, `MatMatTransposeMult()`, `MatPtAP()`, `MatProductCreate()`, `MatProductSymbolic()`, `MatProductReplaceMats()`, `MatProductNumeric()`
10330 @*/
10331 PetscErrorCode MatMatMult(Mat A, Mat B, MatReuse scall, PetscReal fill, Mat *C)
10332 {
10333   PetscFunctionBegin;
10334   PetscCall(MatProduct_Private(A, B, scall, fill, MATPRODUCT_AB, C));
10335   PetscFunctionReturn(PETSC_SUCCESS);
10336 }
10337 
10338 /*@
10339   MatMatTransposeMult - Performs matrix-matrix multiplication $C = A*B^T$.
10340 
10341   Neighbor-wise Collective
10342 
10343   Input Parameters:
10344 + A     - the left matrix
10345 . B     - the right matrix
10346 . scall - either `MAT_INITIAL_MATRIX` or `MAT_REUSE_MATRIX`
10347 - fill  - expected fill as ratio of nnz(C)/(nnz(A) + nnz(B)), use `PETSC_DETERMINE` or `PETSC_CURRENT` if not known
10348 
10349   Output Parameter:
10350 . C - the product matrix
10351 
10352   Options Database Key:
10353 . -matmattransmult_mpidense_mpidense_via {allgatherv,cyclic} - Choose between algorithms for `MATMPIDENSE` matrices: the
10354               first redundantly copies the transposed `B` matrix on each process and requires O(log P) communication complexity;
10355               the second never stores more than one portion of the `B` matrix at a time but requires O(P) communication complexity.
10356 
10357   Level: intermediate
10358 
10359   Notes:
10360   C will be created if `MAT_INITIAL_MATRIX` and must be destroyed by the user with `MatDestroy()`.
10361 
10362   `MAT_REUSE_MATRIX` can only be used if the matrices A and B have the same nonzero pattern as in the previous call
10363 
10364   To determine the correct fill value, run with -info and search for the string "Fill ratio" to see the value
10365   actually needed.
10366 
10367   This routine is currently only implemented for pairs of `MATSEQAIJ` matrices, for the `MATSEQDENSE` class,
10368   and for pairs of `MATMPIDENSE` matrices.
10369 
10370   This routine is shorthand for using `MatProductCreate()` with the `MatProductType` of `MATPRODUCT_ABt`
10371 
10372   The deprecated `PETSC_DEFAULT` in `fill` also means use the current value
10373 
10374 .seealso: [](ch_matrices), `Mat`, `MatProductCreate()`, `MATPRODUCT_ABt`, `MatMatMult()`, `MatTransposeMatMult()` `MatPtAP()`, `MatProductAlgorithm`, `MatProductType`
10375 @*/
10376 PetscErrorCode MatMatTransposeMult(Mat A, Mat B, MatReuse scall, PetscReal fill, Mat *C)
10377 {
10378   PetscFunctionBegin;
10379   PetscCall(MatProduct_Private(A, B, scall, fill, MATPRODUCT_ABt, C));
10380   if (A == B) PetscCall(MatSetOption(*C, MAT_SYMMETRIC, PETSC_TRUE));
10381   PetscFunctionReturn(PETSC_SUCCESS);
10382 }
10383 
10384 /*@
10385   MatTransposeMatMult - Performs matrix-matrix multiplication $C = A^T*B$.
10386 
10387   Neighbor-wise Collective
10388 
10389   Input Parameters:
10390 + A     - the left matrix
10391 . B     - the right matrix
10392 . scall - either `MAT_INITIAL_MATRIX` or `MAT_REUSE_MATRIX`
10393 - fill  - expected fill as ratio of nnz(C)/(nnz(A) + nnz(B)), use `PETSC_DETERMINE` or `PETSC_CURRENT` if not known
10394 
10395   Output Parameter:
10396 . C - the product matrix
10397 
10398   Level: intermediate
10399 
10400   Notes:
10401   `C` will be created if `MAT_INITIAL_MATRIX` and must be destroyed by the user with `MatDestroy()`.
10402 
10403   `MAT_REUSE_MATRIX` can only be used if the matrices A and B have the same nonzero pattern as in the previous call.
10404 
10405   This routine is shorthand for using `MatProductCreate()` with the `MatProductType` of `MATPRODUCT_AtB`
10406 
10407   To determine the correct fill value, run with -info and search for the string "Fill ratio" to see the value
10408   actually needed.
10409 
10410   This routine is currently implemented for pairs of `MATAIJ` matrices and pairs of `MATSEQDENSE` matrices and classes
10411   which inherit from `MATSEQAIJ`.  `C` will be of the same type as the input matrices.
10412 
10413   The deprecated `PETSC_DEFAULT` in `fill` also means use the current value
10414 
10415 .seealso: [](ch_matrices), `Mat`, `MatProductCreate()`, `MATPRODUCT_AtB`, `MatMatMult()`, `MatMatTransposeMult()`, `MatPtAP()`
10416 @*/
10417 PetscErrorCode MatTransposeMatMult(Mat A, Mat B, MatReuse scall, PetscReal fill, Mat *C)
10418 {
10419   PetscFunctionBegin;
10420   PetscCall(MatProduct_Private(A, B, scall, fill, MATPRODUCT_AtB, C));
10421   PetscFunctionReturn(PETSC_SUCCESS);
10422 }
10423 
10424 /*@
10425   MatMatMatMult - Performs matrix-matrix-matrix multiplication D=A*B*C.
10426 
10427   Neighbor-wise Collective
10428 
10429   Input Parameters:
10430 + A     - the left matrix
10431 . B     - the middle matrix
10432 . C     - the right matrix
10433 . scall - either `MAT_INITIAL_MATRIX` or `MAT_REUSE_MATRIX`
10434 - fill  - expected fill as ratio of nnz(D)/(nnz(A) + nnz(B)+nnz(C)), use `PETSC_DETERMINE` or `PETSC_CURRENT` if you do not have a good estimate
10435           if the result is a dense matrix this is irrelevant
10436 
10437   Output Parameter:
10438 . D - the product matrix
10439 
10440   Level: intermediate
10441 
10442   Notes:
10443   Unless `scall` is `MAT_REUSE_MATRIX` `D` will be created.
10444 
10445   `MAT_REUSE_MATRIX` can only be used if the matrices `A`, `B`, and `C` have the same nonzero pattern as in the previous call
10446 
10447   This routine is shorthand for using `MatProductCreate()` with the `MatProductType` of `MATPRODUCT_ABC`
10448 
10449   To determine the correct fill value, run with `-info` and search for the string "Fill ratio" to see the value
10450   actually needed.
10451 
10452   If you have many matrices with the same non-zero structure to multiply, you
10453   should use `MAT_REUSE_MATRIX` in all calls but the first
10454 
10455   The deprecated `PETSC_DEFAULT` in `fill` also means use the current value
10456 
10457 .seealso: [](ch_matrices), `Mat`, `MatProductCreate()`, `MATPRODUCT_ABC`, `MatMatMult`, `MatPtAP()`, `MatMatTransposeMult()`, `MatTransposeMatMult()`
10458 @*/
10459 PetscErrorCode MatMatMatMult(Mat A, Mat B, Mat C, MatReuse scall, PetscReal fill, Mat *D)
10460 {
10461   PetscFunctionBegin;
10462   if (scall == MAT_REUSE_MATRIX) MatCheckProduct(*D, 6);
10463   PetscCheck(scall != MAT_INPLACE_MATRIX, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Inplace product not supported");
10464 
10465   if (scall == MAT_INITIAL_MATRIX) {
10466     PetscCall(MatProductCreate(A, B, C, D));
10467     PetscCall(MatProductSetType(*D, MATPRODUCT_ABC));
10468     PetscCall(MatProductSetAlgorithm(*D, "default"));
10469     PetscCall(MatProductSetFill(*D, fill));
10470 
10471     (*D)->product->api_user = PETSC_TRUE;
10472     PetscCall(MatProductSetFromOptions(*D));
10473     PetscCheck((*D)->ops->productsymbolic, PetscObjectComm((PetscObject)*D), PETSC_ERR_SUP, "MatProduct %s not supported for A %s, B %s and C %s", MatProductTypes[MATPRODUCT_ABC], ((PetscObject)A)->type_name, ((PetscObject)B)->type_name,
10474                ((PetscObject)C)->type_name);
10475     PetscCall(MatProductSymbolic(*D));
10476   } else { /* user may change input matrices when REUSE */
10477     PetscCall(MatProductReplaceMats(A, B, C, *D));
10478   }
10479   PetscCall(MatProductNumeric(*D));
10480   PetscFunctionReturn(PETSC_SUCCESS);
10481 }
10482 
10483 /*@
10484   MatCreateRedundantMatrix - Create redundant matrices and put them into processors of subcommunicators.
10485 
10486   Collective
10487 
10488   Input Parameters:
10489 + mat      - the matrix
10490 . nsubcomm - the number of subcommunicators (= number of redundant parallel or sequential matrices)
10491 . subcomm  - MPI communicator split from the communicator where mat resides in (or `MPI_COMM_NULL` if nsubcomm is used)
10492 - reuse    - either `MAT_INITIAL_MATRIX` or `MAT_REUSE_MATRIX`
10493 
10494   Output Parameter:
10495 . matredundant - redundant matrix
10496 
10497   Level: advanced
10498 
10499   Notes:
10500   `MAT_REUSE_MATRIX` can only be used when the nonzero structure of the
10501   original matrix has not changed from that last call to `MatCreateRedundantMatrix()`.
10502 
10503   This routine creates the duplicated matrices in the subcommunicators; you should NOT create them before
10504   calling it.
10505 
10506   `PetscSubcommCreate()` can be used to manage the creation of the subcomm but need not be.
10507 
10508 .seealso: [](ch_matrices), `Mat`, `MatDestroy()`, `PetscSubcommCreate()`, `PetscSubcomm`
10509 @*/
10510 PetscErrorCode MatCreateRedundantMatrix(Mat mat, PetscInt nsubcomm, MPI_Comm subcomm, MatReuse reuse, Mat *matredundant)
10511 {
10512   MPI_Comm       comm;
10513   PetscMPIInt    size;
10514   PetscInt       mloc_sub, nloc_sub, rstart, rend, M = mat->rmap->N, N = mat->cmap->N, bs = mat->rmap->bs;
10515   Mat_Redundant *redund     = NULL;
10516   PetscSubcomm   psubcomm   = NULL;
10517   MPI_Comm       subcomm_in = subcomm;
10518   Mat           *matseq;
10519   IS             isrow, iscol;
10520   PetscBool      newsubcomm = PETSC_FALSE;
10521 
10522   PetscFunctionBegin;
10523   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
10524   if (nsubcomm && reuse == MAT_REUSE_MATRIX) {
10525     PetscAssertPointer(*matredundant, 5);
10526     PetscValidHeaderSpecific(*matredundant, MAT_CLASSID, 5);
10527   }
10528 
10529   PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)mat), &size));
10530   if (size == 1 || nsubcomm == 1) {
10531     if (reuse == MAT_INITIAL_MATRIX) {
10532       PetscCall(MatDuplicate(mat, MAT_COPY_VALUES, matredundant));
10533     } else {
10534       PetscCheck(*matredundant != mat, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "MAT_REUSE_MATRIX means reuse the matrix passed in as the final argument, not the original matrix");
10535       PetscCall(MatCopy(mat, *matredundant, SAME_NONZERO_PATTERN));
10536     }
10537     PetscFunctionReturn(PETSC_SUCCESS);
10538   }
10539 
10540   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
10541   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
10542   MatCheckPreallocated(mat, 1);
10543 
10544   PetscCall(PetscLogEventBegin(MAT_RedundantMat, mat, 0, 0, 0));
10545   if (subcomm_in == MPI_COMM_NULL && reuse == MAT_INITIAL_MATRIX) { /* get subcomm if user does not provide subcomm */
10546     /* create psubcomm, then get subcomm */
10547     PetscCall(PetscObjectGetComm((PetscObject)mat, &comm));
10548     PetscCallMPI(MPI_Comm_size(comm, &size));
10549     PetscCheck(nsubcomm >= 1 && nsubcomm <= size, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "nsubcomm must between 1 and %d", size);
10550 
10551     PetscCall(PetscSubcommCreate(comm, &psubcomm));
10552     PetscCall(PetscSubcommSetNumber(psubcomm, nsubcomm));
10553     PetscCall(PetscSubcommSetType(psubcomm, PETSC_SUBCOMM_CONTIGUOUS));
10554     PetscCall(PetscSubcommSetFromOptions(psubcomm));
10555     PetscCall(PetscCommDuplicate(PetscSubcommChild(psubcomm), &subcomm, NULL));
10556     newsubcomm = PETSC_TRUE;
10557     PetscCall(PetscSubcommDestroy(&psubcomm));
10558   }
10559 
10560   /* get isrow, iscol and a local sequential matrix matseq[0] */
10561   if (reuse == MAT_INITIAL_MATRIX) {
10562     mloc_sub = PETSC_DECIDE;
10563     nloc_sub = PETSC_DECIDE;
10564     if (bs < 1) {
10565       PetscCall(PetscSplitOwnership(subcomm, &mloc_sub, &M));
10566       PetscCall(PetscSplitOwnership(subcomm, &nloc_sub, &N));
10567     } else {
10568       PetscCall(PetscSplitOwnershipBlock(subcomm, bs, &mloc_sub, &M));
10569       PetscCall(PetscSplitOwnershipBlock(subcomm, bs, &nloc_sub, &N));
10570     }
10571     PetscCallMPI(MPI_Scan(&mloc_sub, &rend, 1, MPIU_INT, MPI_SUM, subcomm));
10572     rstart = rend - mloc_sub;
10573     PetscCall(ISCreateStride(PETSC_COMM_SELF, mloc_sub, rstart, 1, &isrow));
10574     PetscCall(ISCreateStride(PETSC_COMM_SELF, N, 0, 1, &iscol));
10575     PetscCall(ISSetIdentity(iscol));
10576   } else { /* reuse == MAT_REUSE_MATRIX */
10577     PetscCheck(*matredundant != mat, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "MAT_REUSE_MATRIX means reuse the matrix passed in as the final argument, not the original matrix");
10578     /* retrieve subcomm */
10579     PetscCall(PetscObjectGetComm((PetscObject)*matredundant, &subcomm));
10580     redund = (*matredundant)->redundant;
10581     isrow  = redund->isrow;
10582     iscol  = redund->iscol;
10583     matseq = redund->matseq;
10584   }
10585   PetscCall(MatCreateSubMatrices(mat, 1, &isrow, &iscol, reuse, &matseq));
10586 
10587   /* get matredundant over subcomm */
10588   if (reuse == MAT_INITIAL_MATRIX) {
10589     PetscCall(MatCreateMPIMatConcatenateSeqMat(subcomm, matseq[0], nloc_sub, reuse, matredundant));
10590 
10591     /* create a supporting struct and attach it to C for reuse */
10592     PetscCall(PetscNew(&redund));
10593     (*matredundant)->redundant = redund;
10594     redund->isrow              = isrow;
10595     redund->iscol              = iscol;
10596     redund->matseq             = matseq;
10597     if (newsubcomm) {
10598       redund->subcomm = subcomm;
10599     } else {
10600       redund->subcomm = MPI_COMM_NULL;
10601     }
10602   } else {
10603     PetscCall(MatCreateMPIMatConcatenateSeqMat(subcomm, matseq[0], PETSC_DECIDE, reuse, matredundant));
10604   }
10605 #if defined(PETSC_HAVE_VIENNACL) || defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP)
10606   if (matseq[0]->boundtocpu && matseq[0]->bindingpropagates) {
10607     PetscCall(MatBindToCPU(*matredundant, PETSC_TRUE));
10608     PetscCall(MatSetBindingPropagates(*matredundant, PETSC_TRUE));
10609   }
10610 #endif
10611   PetscCall(PetscLogEventEnd(MAT_RedundantMat, mat, 0, 0, 0));
10612   PetscFunctionReturn(PETSC_SUCCESS);
10613 }
10614 
10615 /*@C
10616   MatGetMultiProcBlock - Create multiple 'parallel submatrices' from
10617   a given `Mat`. Each submatrix can span multiple procs.
10618 
10619   Collective
10620 
10621   Input Parameters:
10622 + mat     - the matrix
10623 . subComm - the sub communicator obtained as if by `MPI_Comm_split(PetscObjectComm((PetscObject)mat))`
10624 - scall   - either `MAT_INITIAL_MATRIX` or `MAT_REUSE_MATRIX`
10625 
10626   Output Parameter:
10627 . subMat - parallel sub-matrices each spanning a given `subcomm`
10628 
10629   Level: advanced
10630 
10631   Notes:
10632   The submatrix partition across processors is dictated by `subComm` a
10633   communicator obtained by `MPI_comm_split()` or via `PetscSubcommCreate()`. The `subComm`
10634   is not restricted to be grouped with consecutive original MPI processes.
10635 
10636   Due the `MPI_Comm_split()` usage, the parallel layout of the submatrices
10637   map directly to the layout of the original matrix [wrt the local
10638   row,col partitioning]. So the original 'DiagonalMat' naturally maps
10639   into the 'DiagonalMat' of the `subMat`, hence it is used directly from
10640   the `subMat`. However the offDiagMat looses some columns - and this is
10641   reconstructed with `MatSetValues()`
10642 
10643   This is used by `PCBJACOBI` when a single block spans multiple MPI processes.
10644 
10645 .seealso: [](ch_matrices), `Mat`, `MatCreateRedundantMatrix()`, `MatCreateSubMatrices()`, `PCBJACOBI`
10646 @*/
10647 PetscErrorCode MatGetMultiProcBlock(Mat mat, MPI_Comm subComm, MatReuse scall, Mat *subMat)
10648 {
10649   PetscMPIInt commsize, subCommSize;
10650 
10651   PetscFunctionBegin;
10652   PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)mat), &commsize));
10653   PetscCallMPI(MPI_Comm_size(subComm, &subCommSize));
10654   PetscCheck(subCommSize <= commsize, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_OUTOFRANGE, "CommSize %d < SubCommZize %d", commsize, subCommSize);
10655 
10656   PetscCheck(scall != MAT_REUSE_MATRIX || *subMat != mat, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "MAT_REUSE_MATRIX means reuse the matrix passed in as the final argument, not the original matrix");
10657   PetscCall(PetscLogEventBegin(MAT_GetMultiProcBlock, mat, 0, 0, 0));
10658   PetscUseTypeMethod(mat, getmultiprocblock, subComm, scall, subMat);
10659   PetscCall(PetscLogEventEnd(MAT_GetMultiProcBlock, mat, 0, 0, 0));
10660   PetscFunctionReturn(PETSC_SUCCESS);
10661 }
10662 
10663 /*@
10664   MatGetLocalSubMatrix - Gets a reference to a submatrix specified in local numbering
10665 
10666   Not Collective
10667 
10668   Input Parameters:
10669 + mat   - matrix to extract local submatrix from
10670 . isrow - local row indices for submatrix
10671 - iscol - local column indices for submatrix
10672 
10673   Output Parameter:
10674 . submat - the submatrix
10675 
10676   Level: intermediate
10677 
10678   Notes:
10679   `submat` should be disposed of with `MatRestoreLocalSubMatrix()`.
10680 
10681   Depending on the format of `mat`, the returned `submat` may not implement `MatMult()`.  Its communicator may be
10682   the same as `mat`, it may be `PETSC_COMM_SELF`, or some other sub-communictor of `mat`'s.
10683 
10684   `submat` always implements `MatSetValuesLocal()`.  If `isrow` and `iscol` have the same block size, then
10685   `MatSetValuesBlockedLocal()` will also be implemented.
10686 
10687   `mat` must have had a `ISLocalToGlobalMapping` provided to it with `MatSetLocalToGlobalMapping()`.
10688   Matrices obtained with `DMCreateMatrix()` generally already have the local to global mapping provided.
10689 
10690 .seealso: [](ch_matrices), `Mat`, `MatRestoreLocalSubMatrix()`, `MatCreateLocalRef()`, `MatSetLocalToGlobalMapping()`
10691 @*/
10692 PetscErrorCode MatGetLocalSubMatrix(Mat mat, IS isrow, IS iscol, Mat *submat)
10693 {
10694   PetscFunctionBegin;
10695   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
10696   PetscValidHeaderSpecific(isrow, IS_CLASSID, 2);
10697   PetscValidHeaderSpecific(iscol, IS_CLASSID, 3);
10698   PetscCheckSameComm(isrow, 2, iscol, 3);
10699   PetscAssertPointer(submat, 4);
10700   PetscCheck(mat->rmap->mapping, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Matrix must have local to global mapping provided before this call");
10701 
10702   if (mat->ops->getlocalsubmatrix) {
10703     PetscUseTypeMethod(mat, getlocalsubmatrix, isrow, iscol, submat);
10704   } else {
10705     PetscCall(MatCreateLocalRef(mat, isrow, iscol, submat));
10706   }
10707   PetscFunctionReturn(PETSC_SUCCESS);
10708 }
10709 
10710 /*@
10711   MatRestoreLocalSubMatrix - Restores a reference to a submatrix specified in local numbering obtained with `MatGetLocalSubMatrix()`
10712 
10713   Not Collective
10714 
10715   Input Parameters:
10716 + mat    - matrix to extract local submatrix from
10717 . isrow  - local row indices for submatrix
10718 . iscol  - local column indices for submatrix
10719 - submat - the submatrix
10720 
10721   Level: intermediate
10722 
10723 .seealso: [](ch_matrices), `Mat`, `MatGetLocalSubMatrix()`
10724 @*/
10725 PetscErrorCode MatRestoreLocalSubMatrix(Mat mat, IS isrow, IS iscol, Mat *submat)
10726 {
10727   PetscFunctionBegin;
10728   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
10729   PetscValidHeaderSpecific(isrow, IS_CLASSID, 2);
10730   PetscValidHeaderSpecific(iscol, IS_CLASSID, 3);
10731   PetscCheckSameComm(isrow, 2, iscol, 3);
10732   PetscAssertPointer(submat, 4);
10733   if (*submat) PetscValidHeaderSpecific(*submat, MAT_CLASSID, 4);
10734 
10735   if (mat->ops->restorelocalsubmatrix) {
10736     PetscUseTypeMethod(mat, restorelocalsubmatrix, isrow, iscol, submat);
10737   } else {
10738     PetscCall(MatDestroy(submat));
10739   }
10740   *submat = NULL;
10741   PetscFunctionReturn(PETSC_SUCCESS);
10742 }
10743 
10744 /*@
10745   MatFindZeroDiagonals - Finds all the rows of a matrix that have zero or no diagonal entry in the matrix
10746 
10747   Collective
10748 
10749   Input Parameter:
10750 . mat - the matrix
10751 
10752   Output Parameter:
10753 . is - if any rows have zero diagonals this contains the list of them
10754 
10755   Level: developer
10756 
10757 .seealso: [](ch_matrices), `Mat`, `MatMultTranspose()`, `MatMultAdd()`, `MatMultTransposeAdd()`
10758 @*/
10759 PetscErrorCode MatFindZeroDiagonals(Mat mat, IS *is)
10760 {
10761   PetscFunctionBegin;
10762   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
10763   PetscValidType(mat, 1);
10764   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
10765   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
10766 
10767   if (!mat->ops->findzerodiagonals) {
10768     Vec                diag;
10769     const PetscScalar *a;
10770     PetscInt          *rows;
10771     PetscInt           rStart, rEnd, r, nrow = 0;
10772 
10773     PetscCall(MatCreateVecs(mat, &diag, NULL));
10774     PetscCall(MatGetDiagonal(mat, diag));
10775     PetscCall(MatGetOwnershipRange(mat, &rStart, &rEnd));
10776     PetscCall(VecGetArrayRead(diag, &a));
10777     for (r = 0; r < rEnd - rStart; ++r)
10778       if (a[r] == 0.0) ++nrow;
10779     PetscCall(PetscMalloc1(nrow, &rows));
10780     nrow = 0;
10781     for (r = 0; r < rEnd - rStart; ++r)
10782       if (a[r] == 0.0) rows[nrow++] = r + rStart;
10783     PetscCall(VecRestoreArrayRead(diag, &a));
10784     PetscCall(VecDestroy(&diag));
10785     PetscCall(ISCreateGeneral(PetscObjectComm((PetscObject)mat), nrow, rows, PETSC_OWN_POINTER, is));
10786   } else {
10787     PetscUseTypeMethod(mat, findzerodiagonals, is);
10788   }
10789   PetscFunctionReturn(PETSC_SUCCESS);
10790 }
10791 
10792 /*@
10793   MatFindOffBlockDiagonalEntries - Finds all the rows of a matrix that have entries outside of the main diagonal block (defined by the matrix block size)
10794 
10795   Collective
10796 
10797   Input Parameter:
10798 . mat - the matrix
10799 
10800   Output Parameter:
10801 . is - contains the list of rows with off block diagonal entries
10802 
10803   Level: developer
10804 
10805 .seealso: [](ch_matrices), `Mat`, `MatMultTranspose()`, `MatMultAdd()`, `MatMultTransposeAdd()`
10806 @*/
10807 PetscErrorCode MatFindOffBlockDiagonalEntries(Mat mat, IS *is)
10808 {
10809   PetscFunctionBegin;
10810   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
10811   PetscValidType(mat, 1);
10812   PetscCheck(mat->assembled, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
10813   PetscCheck(!mat->factortype, PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
10814 
10815   PetscUseTypeMethod(mat, findoffblockdiagonalentries, is);
10816   PetscFunctionReturn(PETSC_SUCCESS);
10817 }
10818 
10819 /*@C
10820   MatInvertBlockDiagonal - Inverts the block diagonal entries.
10821 
10822   Collective; No Fortran Support
10823 
10824   Input Parameter:
10825 . mat - the matrix
10826 
10827   Output Parameter:
10828 . values - the block inverses in column major order (FORTRAN-like)
10829 
10830   Level: advanced
10831 
10832   Notes:
10833   The size of the blocks is determined by the block size of the matrix.
10834 
10835   The blocks never overlap between two MPI processes, use `MatInvertVariableBlockEnvelope()` for that case
10836 
10837   The blocks all have the same size, use `MatInvertVariableBlockDiagonal()` for variable block size
10838 
10839 .seealso: [](ch_matrices), `Mat`, `MatInvertVariableBlockEnvelope()`, `MatInvertBlockDiagonalMat()`
10840 @*/
10841 PetscErrorCode MatInvertBlockDiagonal(Mat mat, const PetscScalar *values[])
10842 {
10843   PetscFunctionBegin;
10844   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
10845   PetscCheck(mat->assembled, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
10846   PetscCheck(!mat->factortype, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
10847   PetscUseTypeMethod(mat, invertblockdiagonal, values);
10848   PetscFunctionReturn(PETSC_SUCCESS);
10849 }
10850 
10851 /*@
10852   MatInvertVariableBlockDiagonal - Inverts the point block diagonal entries.
10853 
10854   Collective; No Fortran Support
10855 
10856   Input Parameters:
10857 + mat     - the matrix
10858 . nblocks - the number of blocks on the process, set with `MatSetVariableBlockSizes()`
10859 - bsizes  - the size of each block on the process, set with `MatSetVariableBlockSizes()`
10860 
10861   Output Parameter:
10862 . values - the block inverses in column major order (FORTRAN-like)
10863 
10864   Level: advanced
10865 
10866   Notes:
10867   Use `MatInvertBlockDiagonal()` if all blocks have the same size
10868 
10869   The blocks never overlap between two MPI processes, use `MatInvertVariableBlockEnvelope()` for that case
10870 
10871 .seealso: [](ch_matrices), `Mat`, `MatInvertBlockDiagonal()`, `MatSetVariableBlockSizes()`, `MatInvertVariableBlockEnvelope()`
10872 @*/
10873 PetscErrorCode MatInvertVariableBlockDiagonal(Mat mat, PetscInt nblocks, const PetscInt bsizes[], PetscScalar values[])
10874 {
10875   PetscFunctionBegin;
10876   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
10877   PetscCheck(mat->assembled, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix");
10878   PetscCheck(!mat->factortype, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for factored matrix");
10879   PetscUseTypeMethod(mat, invertvariableblockdiagonal, nblocks, bsizes, values);
10880   PetscFunctionReturn(PETSC_SUCCESS);
10881 }
10882 
10883 /*@
10884   MatInvertBlockDiagonalMat - set the values of matrix C to be the inverted block diagonal of matrix A
10885 
10886   Collective
10887 
10888   Input Parameters:
10889 + A - the matrix
10890 - C - matrix with inverted block diagonal of `A`.  This matrix should be created and may have its type set.
10891 
10892   Level: advanced
10893 
10894   Note:
10895   The blocksize of the matrix is used to determine the blocks on the diagonal of `C`
10896 
10897 .seealso: [](ch_matrices), `Mat`, `MatInvertBlockDiagonal()`
10898 @*/
10899 PetscErrorCode MatInvertBlockDiagonalMat(Mat A, Mat C)
10900 {
10901   const PetscScalar *vals;
10902   PetscInt          *dnnz;
10903   PetscInt           m, rstart, rend, bs, i, j;
10904 
10905   PetscFunctionBegin;
10906   PetscCall(MatInvertBlockDiagonal(A, &vals));
10907   PetscCall(MatGetBlockSize(A, &bs));
10908   PetscCall(MatGetLocalSize(A, &m, NULL));
10909   PetscCall(MatSetLayouts(C, A->rmap, A->cmap));
10910   PetscCall(PetscMalloc1(m / bs, &dnnz));
10911   for (j = 0; j < m / bs; j++) dnnz[j] = 1;
10912   PetscCall(MatXAIJSetPreallocation(C, bs, dnnz, NULL, NULL, NULL));
10913   PetscCall(PetscFree(dnnz));
10914   PetscCall(MatGetOwnershipRange(C, &rstart, &rend));
10915   PetscCall(MatSetOption(C, MAT_ROW_ORIENTED, PETSC_FALSE));
10916   for (i = rstart / bs; i < rend / bs; i++) PetscCall(MatSetValuesBlocked(C, 1, &i, 1, &i, &vals[(i - rstart / bs) * bs * bs], INSERT_VALUES));
10917   PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY));
10918   PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY));
10919   PetscCall(MatSetOption(C, MAT_ROW_ORIENTED, PETSC_TRUE));
10920   PetscFunctionReturn(PETSC_SUCCESS);
10921 }
10922 
10923 /*@
10924   MatTransposeColoringDestroy - Destroys a coloring context for matrix product $C = A*B^T$ that was created
10925   via `MatTransposeColoringCreate()`.
10926 
10927   Collective
10928 
10929   Input Parameter:
10930 . c - coloring context
10931 
10932   Level: intermediate
10933 
10934 .seealso: [](ch_matrices), `Mat`, `MatTransposeColoringCreate()`
10935 @*/
10936 PetscErrorCode MatTransposeColoringDestroy(MatTransposeColoring *c)
10937 {
10938   MatTransposeColoring matcolor = *c;
10939 
10940   PetscFunctionBegin;
10941   if (!matcolor) PetscFunctionReturn(PETSC_SUCCESS);
10942   if (--((PetscObject)matcolor)->refct > 0) {
10943     matcolor = NULL;
10944     PetscFunctionReturn(PETSC_SUCCESS);
10945   }
10946 
10947   PetscCall(PetscFree3(matcolor->ncolumns, matcolor->nrows, matcolor->colorforrow));
10948   PetscCall(PetscFree(matcolor->rows));
10949   PetscCall(PetscFree(matcolor->den2sp));
10950   PetscCall(PetscFree(matcolor->colorforcol));
10951   PetscCall(PetscFree(matcolor->columns));
10952   if (matcolor->brows > 0) PetscCall(PetscFree(matcolor->lstart));
10953   PetscCall(PetscHeaderDestroy(c));
10954   PetscFunctionReturn(PETSC_SUCCESS);
10955 }
10956 
10957 /*@
10958   MatTransColoringApplySpToDen - Given a symbolic matrix product $C = A*B^T$ for which
10959   a `MatTransposeColoring` context has been created, computes a dense $B^T$ by applying
10960   `MatTransposeColoring` to sparse `B`.
10961 
10962   Collective
10963 
10964   Input Parameters:
10965 + coloring - coloring context created with `MatTransposeColoringCreate()`
10966 - B        - sparse matrix
10967 
10968   Output Parameter:
10969 . Btdense - dense matrix $B^T$
10970 
10971   Level: developer
10972 
10973   Note:
10974   These are used internally for some implementations of `MatRARt()`
10975 
10976 .seealso: [](ch_matrices), `Mat`, `MatTransposeColoringCreate()`, `MatTransposeColoringDestroy()`, `MatTransColoringApplyDenToSp()`
10977 @*/
10978 PetscErrorCode MatTransColoringApplySpToDen(MatTransposeColoring coloring, Mat B, Mat Btdense)
10979 {
10980   PetscFunctionBegin;
10981   PetscValidHeaderSpecific(coloring, MAT_TRANSPOSECOLORING_CLASSID, 1);
10982   PetscValidHeaderSpecific(B, MAT_CLASSID, 2);
10983   PetscValidHeaderSpecific(Btdense, MAT_CLASSID, 3);
10984 
10985   PetscCall((*B->ops->transcoloringapplysptoden)(coloring, B, Btdense));
10986   PetscFunctionReturn(PETSC_SUCCESS);
10987 }
10988 
10989 /*@
10990   MatTransColoringApplyDenToSp - Given a symbolic matrix product $C_{sp} = A*B^T$ for which
10991   a `MatTransposeColoring` context has been created and a dense matrix $C_{den} = A*B^T_{dense}$
10992   in which `B^T_{dens}` is obtained from `MatTransColoringApplySpToDen()`, recover sparse matrix
10993   $C_{sp}$ from $C_{den}$.
10994 
10995   Collective
10996 
10997   Input Parameters:
10998 + matcoloring - coloring context created with `MatTransposeColoringCreate()`
10999 - Cden        - matrix product of a sparse matrix and a dense matrix Btdense
11000 
11001   Output Parameter:
11002 . Csp - sparse matrix
11003 
11004   Level: developer
11005 
11006   Note:
11007   These are used internally for some implementations of `MatRARt()`
11008 
11009 .seealso: [](ch_matrices), `Mat`, `MatTransposeColoringCreate()`, `MatTransposeColoringDestroy()`, `MatTransColoringApplySpToDen()`
11010 @*/
11011 PetscErrorCode MatTransColoringApplyDenToSp(MatTransposeColoring matcoloring, Mat Cden, Mat Csp)
11012 {
11013   PetscFunctionBegin;
11014   PetscValidHeaderSpecific(matcoloring, MAT_TRANSPOSECOLORING_CLASSID, 1);
11015   PetscValidHeaderSpecific(Cden, MAT_CLASSID, 2);
11016   PetscValidHeaderSpecific(Csp, MAT_CLASSID, 3);
11017 
11018   PetscCall((*Csp->ops->transcoloringapplydentosp)(matcoloring, Cden, Csp));
11019   PetscCall(MatAssemblyBegin(Csp, MAT_FINAL_ASSEMBLY));
11020   PetscCall(MatAssemblyEnd(Csp, MAT_FINAL_ASSEMBLY));
11021   PetscFunctionReturn(PETSC_SUCCESS);
11022 }
11023 
11024 /*@
11025   MatTransposeColoringCreate - Creates a matrix coloring context for the matrix product $C = A*B^T$.
11026 
11027   Collective
11028 
11029   Input Parameters:
11030 + mat        - the matrix product C
11031 - iscoloring - the coloring of the matrix; usually obtained with `MatColoringCreate()` or `DMCreateColoring()`
11032 
11033   Output Parameter:
11034 . color - the new coloring context
11035 
11036   Level: intermediate
11037 
11038 .seealso: [](ch_matrices), `Mat`, `MatTransposeColoringDestroy()`, `MatTransColoringApplySpToDen()`,
11039           `MatTransColoringApplyDenToSp()`
11040 @*/
11041 PetscErrorCode MatTransposeColoringCreate(Mat mat, ISColoring iscoloring, MatTransposeColoring *color)
11042 {
11043   MatTransposeColoring c;
11044   MPI_Comm             comm;
11045 
11046   PetscFunctionBegin;
11047   PetscAssertPointer(color, 3);
11048 
11049   PetscCall(PetscLogEventBegin(MAT_TransposeColoringCreate, mat, 0, 0, 0));
11050   PetscCall(PetscObjectGetComm((PetscObject)mat, &comm));
11051   PetscCall(PetscHeaderCreate(c, MAT_TRANSPOSECOLORING_CLASSID, "MatTransposeColoring", "Matrix product C=A*B^T via coloring", "Mat", comm, MatTransposeColoringDestroy, NULL));
11052   c->ctype = iscoloring->ctype;
11053   PetscUseTypeMethod(mat, transposecoloringcreate, iscoloring, c);
11054   *color = c;
11055   PetscCall(PetscLogEventEnd(MAT_TransposeColoringCreate, mat, 0, 0, 0));
11056   PetscFunctionReturn(PETSC_SUCCESS);
11057 }
11058 
11059 /*@
11060   MatGetNonzeroState - Returns a 64-bit integer representing the current state of nonzeros in the matrix. If the
11061   matrix has had new nonzero locations added to (or removed from) the matrix since the previous call, the value will be larger.
11062 
11063   Not Collective
11064 
11065   Input Parameter:
11066 . mat - the matrix
11067 
11068   Output Parameter:
11069 . state - the current state
11070 
11071   Level: intermediate
11072 
11073   Notes:
11074   You can only compare states from two different calls to the SAME matrix, you cannot compare calls between
11075   different matrices
11076 
11077   Use `PetscObjectStateGet()` to check for changes to the numerical values in a matrix
11078 
11079   Use the result of `PetscObjectGetId()` to compare if a previously checked matrix is the same as the current matrix, do not compare object pointers.
11080 
11081 .seealso: [](ch_matrices), `Mat`, `PetscObjectStateGet()`, `PetscObjectGetId()`
11082 @*/
11083 PetscErrorCode MatGetNonzeroState(Mat mat, PetscObjectState *state)
11084 {
11085   PetscFunctionBegin;
11086   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
11087   *state = mat->nonzerostate;
11088   PetscFunctionReturn(PETSC_SUCCESS);
11089 }
11090 
11091 /*@
11092   MatCreateMPIMatConcatenateSeqMat - Creates a single large PETSc matrix by concatenating sequential
11093   matrices from each processor
11094 
11095   Collective
11096 
11097   Input Parameters:
11098 + comm   - the communicators the parallel matrix will live on
11099 . seqmat - the input sequential matrices
11100 . n      - number of local columns (or `PETSC_DECIDE`)
11101 - reuse  - either `MAT_INITIAL_MATRIX` or `MAT_REUSE_MATRIX`
11102 
11103   Output Parameter:
11104 . mpimat - the parallel matrix generated
11105 
11106   Level: developer
11107 
11108   Note:
11109   The number of columns of the matrix in EACH processor MUST be the same.
11110 
11111 .seealso: [](ch_matrices), `Mat`
11112 @*/
11113 PetscErrorCode MatCreateMPIMatConcatenateSeqMat(MPI_Comm comm, Mat seqmat, PetscInt n, MatReuse reuse, Mat *mpimat)
11114 {
11115   PetscMPIInt size;
11116 
11117   PetscFunctionBegin;
11118   PetscCallMPI(MPI_Comm_size(comm, &size));
11119   if (size == 1) {
11120     if (reuse == MAT_INITIAL_MATRIX) {
11121       PetscCall(MatDuplicate(seqmat, MAT_COPY_VALUES, mpimat));
11122     } else {
11123       PetscCall(MatCopy(seqmat, *mpimat, SAME_NONZERO_PATTERN));
11124     }
11125     PetscFunctionReturn(PETSC_SUCCESS);
11126   }
11127 
11128   PetscCheck(reuse != MAT_REUSE_MATRIX || seqmat != *mpimat, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "MAT_REUSE_MATRIX means reuse the matrix passed in as the final argument, not the original matrix");
11129 
11130   PetscCall(PetscLogEventBegin(MAT_Merge, seqmat, 0, 0, 0));
11131   PetscCall((*seqmat->ops->creatempimatconcatenateseqmat)(comm, seqmat, n, reuse, mpimat));
11132   PetscCall(PetscLogEventEnd(MAT_Merge, seqmat, 0, 0, 0));
11133   PetscFunctionReturn(PETSC_SUCCESS);
11134 }
11135 
11136 /*@
11137   MatSubdomainsCreateCoalesce - Creates index subdomains by coalescing adjacent MPI processes' ownership ranges.
11138 
11139   Collective
11140 
11141   Input Parameters:
11142 + A - the matrix to create subdomains from
11143 - N - requested number of subdomains
11144 
11145   Output Parameters:
11146 + n   - number of subdomains resulting on this MPI process
11147 - iss - `IS` list with indices of subdomains on this MPI process
11148 
11149   Level: advanced
11150 
11151   Note:
11152   The number of subdomains must be smaller than the communicator size
11153 
11154 .seealso: [](ch_matrices), `Mat`, `IS`
11155 @*/
11156 PetscErrorCode MatSubdomainsCreateCoalesce(Mat A, PetscInt N, PetscInt *n, IS *iss[])
11157 {
11158   MPI_Comm    comm, subcomm;
11159   PetscMPIInt size, rank, color;
11160   PetscInt    rstart, rend, k;
11161 
11162   PetscFunctionBegin;
11163   PetscCall(PetscObjectGetComm((PetscObject)A, &comm));
11164   PetscCallMPI(MPI_Comm_size(comm, &size));
11165   PetscCallMPI(MPI_Comm_rank(comm, &rank));
11166   PetscCheck(N >= 1 && N < (PetscInt)size, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "number of subdomains must be > 0 and < %d, got N = %" PetscInt_FMT, size, N);
11167   *n    = 1;
11168   k     = ((PetscInt)size) / N + ((PetscInt)size % N > 0); /* There are up to k ranks to a color */
11169   color = rank / k;
11170   PetscCallMPI(MPI_Comm_split(comm, color, rank, &subcomm));
11171   PetscCall(PetscMalloc1(1, iss));
11172   PetscCall(MatGetOwnershipRange(A, &rstart, &rend));
11173   PetscCall(ISCreateStride(subcomm, rend - rstart, rstart, 1, iss[0]));
11174   PetscCallMPI(MPI_Comm_free(&subcomm));
11175   PetscFunctionReturn(PETSC_SUCCESS);
11176 }
11177 
11178 /*@
11179   MatGalerkin - Constructs the coarse grid problem matrix via Galerkin projection.
11180 
11181   If the interpolation and restriction operators are the same, uses `MatPtAP()`.
11182   If they are not the same, uses `MatMatMatMult()`.
11183 
11184   Once the coarse grid problem is constructed, correct for interpolation operators
11185   that are not of full rank, which can legitimately happen in the case of non-nested
11186   geometric multigrid.
11187 
11188   Input Parameters:
11189 + restrct     - restriction operator
11190 . dA          - fine grid matrix
11191 . interpolate - interpolation operator
11192 . reuse       - either `MAT_INITIAL_MATRIX` or `MAT_REUSE_MATRIX`
11193 - fill        - expected fill, use `PETSC_DETERMINE` or `PETSC_DETERMINE` if you do not have a good estimate
11194 
11195   Output Parameter:
11196 . A - the Galerkin coarse matrix
11197 
11198   Options Database Key:
11199 . -pc_mg_galerkin <both,pmat,mat,none> - for what matrices the Galerkin process should be used
11200 
11201   Level: developer
11202 
11203   Note:
11204   The deprecated `PETSC_DEFAULT` in `fill` also means use the current value
11205 
11206 .seealso: [](ch_matrices), `Mat`, `MatPtAP()`, `MatMatMatMult()`
11207 @*/
11208 PetscErrorCode MatGalerkin(Mat restrct, Mat dA, Mat interpolate, MatReuse reuse, PetscReal fill, Mat *A)
11209 {
11210   IS  zerorows;
11211   Vec diag;
11212 
11213   PetscFunctionBegin;
11214   PetscCheck(reuse != MAT_INPLACE_MATRIX, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Inplace product not supported");
11215   /* Construct the coarse grid matrix */
11216   if (interpolate == restrct) {
11217     PetscCall(MatPtAP(dA, interpolate, reuse, fill, A));
11218   } else {
11219     PetscCall(MatMatMatMult(restrct, dA, interpolate, reuse, fill, A));
11220   }
11221 
11222   /* If the interpolation matrix is not of full rank, A will have zero rows.
11223      This can legitimately happen in the case of non-nested geometric multigrid.
11224      In that event, we set the rows of the matrix to the rows of the identity,
11225      ignoring the equations (as the RHS will also be zero). */
11226 
11227   PetscCall(MatFindZeroRows(*A, &zerorows));
11228 
11229   if (zerorows != NULL) { /* if there are any zero rows */
11230     PetscCall(MatCreateVecs(*A, &diag, NULL));
11231     PetscCall(MatGetDiagonal(*A, diag));
11232     PetscCall(VecISSet(diag, zerorows, 1.0));
11233     PetscCall(MatDiagonalSet(*A, diag, INSERT_VALUES));
11234     PetscCall(VecDestroy(&diag));
11235     PetscCall(ISDestroy(&zerorows));
11236   }
11237   PetscFunctionReturn(PETSC_SUCCESS);
11238 }
11239 
11240 /*@C
11241   MatSetOperation - Allows user to set a matrix operation for any matrix type
11242 
11243   Logically Collective
11244 
11245   Input Parameters:
11246 + mat - the matrix
11247 . op  - the name of the operation
11248 - f   - the function that provides the operation
11249 
11250   Level: developer
11251 
11252   Example Usage:
11253 .vb
11254   extern PetscErrorCode usermult(Mat, Vec, Vec);
11255 
11256   PetscCall(MatCreateXXX(comm, ..., &A));
11257   PetscCall(MatSetOperation(A, MATOP_MULT, (PetscVoidFn *)usermult));
11258 .ve
11259 
11260   Notes:
11261   See the file `include/petscmat.h` for a complete list of matrix
11262   operations, which all have the form MATOP_<OPERATION>, where
11263   <OPERATION> is the name (in all capital letters) of the
11264   user interface routine (e.g., `MatMult()` -> `MATOP_MULT`).
11265 
11266   All user-provided functions (except for `MATOP_DESTROY`) should have the same calling
11267   sequence as the usual matrix interface routines, since they
11268   are intended to be accessed via the usual matrix interface
11269   routines, e.g.,
11270 .vb
11271   MatMult(Mat, Vec, Vec) -> usermult(Mat, Vec, Vec)
11272 .ve
11273 
11274   In particular each function MUST return `PETSC_SUCCESS` on success and
11275   nonzero on failure.
11276 
11277   This routine is distinct from `MatShellSetOperation()` in that it can be called on any matrix type.
11278 
11279 .seealso: [](ch_matrices), `Mat`, `MatGetOperation()`, `MatCreateShell()`, `MatShellSetContext()`, `MatShellSetOperation()`
11280 @*/
11281 PetscErrorCode MatSetOperation(Mat mat, MatOperation op, void (*f)(void))
11282 {
11283   PetscFunctionBegin;
11284   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
11285   if (op == MATOP_VIEW && !mat->ops->viewnative && f != (void (*)(void))mat->ops->view) mat->ops->viewnative = mat->ops->view;
11286   (((void (**)(void))mat->ops)[op]) = f;
11287   PetscFunctionReturn(PETSC_SUCCESS);
11288 }
11289 
11290 /*@C
11291   MatGetOperation - Gets a matrix operation for any matrix type.
11292 
11293   Not Collective
11294 
11295   Input Parameters:
11296 + mat - the matrix
11297 - op  - the name of the operation
11298 
11299   Output Parameter:
11300 . f - the function that provides the operation
11301 
11302   Level: developer
11303 
11304   Example Usage:
11305 .vb
11306   PetscErrorCode (*usermult)(Mat, Vec, Vec);
11307 
11308   MatGetOperation(A, MATOP_MULT, (void (**)(void))&usermult);
11309 .ve
11310 
11311   Notes:
11312   See the file include/petscmat.h for a complete list of matrix
11313   operations, which all have the form MATOP_<OPERATION>, where
11314   <OPERATION> is the name (in all capital letters) of the
11315   user interface routine (e.g., `MatMult()` -> `MATOP_MULT`).
11316 
11317   This routine is distinct from `MatShellGetOperation()` in that it can be called on any matrix type.
11318 
11319 .seealso: [](ch_matrices), `Mat`, `MatSetOperation()`, `MatCreateShell()`, `MatShellGetContext()`, `MatShellGetOperation()`
11320 @*/
11321 PetscErrorCode MatGetOperation(Mat mat, MatOperation op, void (**f)(void))
11322 {
11323   PetscFunctionBegin;
11324   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
11325   *f = (((void (**)(void))mat->ops)[op]);
11326   PetscFunctionReturn(PETSC_SUCCESS);
11327 }
11328 
11329 /*@
11330   MatHasOperation - Determines whether the given matrix supports the particular operation.
11331 
11332   Not Collective
11333 
11334   Input Parameters:
11335 + mat - the matrix
11336 - op  - the operation, for example, `MATOP_GET_DIAGONAL`
11337 
11338   Output Parameter:
11339 . has - either `PETSC_TRUE` or `PETSC_FALSE`
11340 
11341   Level: advanced
11342 
11343   Note:
11344   See `MatSetOperation()` for additional discussion on naming convention and usage of `op`.
11345 
11346 .seealso: [](ch_matrices), `Mat`, `MatCreateShell()`, `MatGetOperation()`, `MatSetOperation()`
11347 @*/
11348 PetscErrorCode MatHasOperation(Mat mat, MatOperation op, PetscBool *has)
11349 {
11350   PetscFunctionBegin;
11351   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
11352   PetscAssertPointer(has, 3);
11353   if (mat->ops->hasoperation) {
11354     PetscUseTypeMethod(mat, hasoperation, op, has);
11355   } else {
11356     if (((void **)mat->ops)[op]) *has = PETSC_TRUE;
11357     else {
11358       *has = PETSC_FALSE;
11359       if (op == MATOP_CREATE_SUBMATRIX) {
11360         PetscMPIInt size;
11361 
11362         PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)mat), &size));
11363         if (size == 1) PetscCall(MatHasOperation(mat, MATOP_CREATE_SUBMATRICES, has));
11364       }
11365     }
11366   }
11367   PetscFunctionReturn(PETSC_SUCCESS);
11368 }
11369 
11370 /*@
11371   MatHasCongruentLayouts - Determines whether the rows and columns layouts of the matrix are congruent
11372 
11373   Collective
11374 
11375   Input Parameter:
11376 . mat - the matrix
11377 
11378   Output Parameter:
11379 . cong - either `PETSC_TRUE` or `PETSC_FALSE`
11380 
11381   Level: beginner
11382 
11383 .seealso: [](ch_matrices), `Mat`, `MatCreate()`, `MatSetSizes()`, `PetscLayout`
11384 @*/
11385 PetscErrorCode MatHasCongruentLayouts(Mat mat, PetscBool *cong)
11386 {
11387   PetscFunctionBegin;
11388   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
11389   PetscValidType(mat, 1);
11390   PetscAssertPointer(cong, 2);
11391   if (!mat->rmap || !mat->cmap) {
11392     *cong = mat->rmap == mat->cmap ? PETSC_TRUE : PETSC_FALSE;
11393     PetscFunctionReturn(PETSC_SUCCESS);
11394   }
11395   if (mat->congruentlayouts == PETSC_DECIDE) { /* first time we compare rows and cols layouts */
11396     PetscCall(PetscLayoutSetUp(mat->rmap));
11397     PetscCall(PetscLayoutSetUp(mat->cmap));
11398     PetscCall(PetscLayoutCompare(mat->rmap, mat->cmap, cong));
11399     if (*cong) mat->congruentlayouts = 1;
11400     else mat->congruentlayouts = 0;
11401   } else *cong = mat->congruentlayouts ? PETSC_TRUE : PETSC_FALSE;
11402   PetscFunctionReturn(PETSC_SUCCESS);
11403 }
11404 
11405 PetscErrorCode MatSetInf(Mat A)
11406 {
11407   PetscFunctionBegin;
11408   PetscUseTypeMethod(A, setinf);
11409   PetscFunctionReturn(PETSC_SUCCESS);
11410 }
11411 
11412 /*@
11413   MatCreateGraph - create a scalar matrix (that is a matrix with one vertex for each block vertex in the original matrix), for use in graph algorithms
11414   and possibly removes small values from the graph structure.
11415 
11416   Collective
11417 
11418   Input Parameters:
11419 + A       - the matrix
11420 . sym     - `PETSC_TRUE` indicates that the graph should be symmetrized
11421 . scale   - `PETSC_TRUE` indicates that the graph edge weights should be symmetrically scaled with the diagonal entry
11422 . filter  - filter value - < 0: does nothing; == 0: removes only 0.0 entries; otherwise: removes entries with abs(entries) <= value
11423 . num_idx - size of 'index' array
11424 - index   - array of block indices to use for graph strength of connection weight
11425 
11426   Output Parameter:
11427 . graph - the resulting graph
11428 
11429   Level: advanced
11430 
11431 .seealso: [](ch_matrices), `Mat`, `MatCreate()`, `PCGAMG`
11432 @*/
11433 PetscErrorCode MatCreateGraph(Mat A, PetscBool sym, PetscBool scale, PetscReal filter, PetscInt num_idx, PetscInt index[], Mat *graph)
11434 {
11435   PetscFunctionBegin;
11436   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
11437   PetscValidType(A, 1);
11438   PetscValidLogicalCollectiveBool(A, scale, 3);
11439   PetscAssertPointer(graph, 7);
11440   PetscCall(PetscLogEventBegin(MAT_CreateGraph, A, 0, 0, 0));
11441   PetscUseTypeMethod(A, creategraph, sym, scale, filter, num_idx, index, graph);
11442   PetscCall(PetscLogEventEnd(MAT_CreateGraph, A, 0, 0, 0));
11443   PetscFunctionReturn(PETSC_SUCCESS);
11444 }
11445 
11446 /*@
11447   MatEliminateZeros - eliminate the nondiagonal zero entries in place from the nonzero structure of a sparse `Mat` in place,
11448   meaning the same memory is used for the matrix, and no new memory is allocated.
11449 
11450   Collective
11451 
11452   Input Parameters:
11453 + A    - the matrix
11454 - keep - if for a given row of `A`, the diagonal coefficient is zero, indicates whether it should be left in the structure or eliminated as well
11455 
11456   Level: intermediate
11457 
11458   Developer Note:
11459   The entries in the sparse matrix data structure are shifted to fill in the unneeded locations in the data. Thus the end
11460   of the arrays in the data structure are unneeded.
11461 
11462 .seealso: [](ch_matrices), `Mat`, `MatCreate()`, `MatCreateGraph()`, `MatFilter()`
11463 @*/
11464 PetscErrorCode MatEliminateZeros(Mat A, PetscBool keep)
11465 {
11466   PetscFunctionBegin;
11467   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
11468   PetscUseTypeMethod(A, eliminatezeros, keep);
11469   PetscFunctionReturn(PETSC_SUCCESS);
11470 }
11471