xref: /petsc/src/mat/utils/gcreate.c (revision 593c1905dad567ae273cd337623ecaef31b3e817)
1be1d678aSKris Buschelman #define PETSCMAT_DLL
27807a1faSBarry Smith 
3273d9f13SBarry Smith #include "src/mat/matimpl.h"       /*I "petscmat.h"  I*/
4325e03aeSBarry Smith #include "petscsys.h"
57807a1faSBarry Smith 
64a2ae208SSatish Balay #undef __FUNCT__
74a2ae208SSatish Balay #define __FUNCT__ "MatPublish_Base"
86849ba73SBarry Smith static PetscErrorCode MatPublish_Base(PetscObject obj)
935d8aa7fSBarry Smith {
1035d8aa7fSBarry Smith   PetscFunctionBegin;
1135d8aa7fSBarry Smith   PetscFunctionReturn(0);
1235d8aa7fSBarry Smith }
1335d8aa7fSBarry Smith 
1435d8aa7fSBarry Smith 
154a2ae208SSatish Balay #undef __FUNCT__
164a2ae208SSatish Balay #define __FUNCT__ "MatCreate"
1705869f15SSatish Balay /*@
1869dd0797SLois Curfman McInnes    MatCreate - Creates a matrix where the type is determined
197e5f4302SBarry Smith    from either a call to MatSetType() or from the options database
207e5f4302SBarry Smith    with a call to MatSetFromOptions(). The default matrix type is
217e5f4302SBarry Smith    AIJ, using the routines MatCreateSeqAIJ() or MatCreateMPIAIJ()
227e5f4302SBarry Smith    if you do not set a type in the options database. If you never
237e5f4302SBarry Smith    call MatSetType() or MatSetFromOptions() it will generate an
24f8ab6608SSatish Balay    error when you try to use the matrix.
2583e1b59cSLois Curfman McInnes 
26cb13003dSBarry Smith    Collective on MPI_Comm
27cb13003dSBarry Smith 
28f69a0ea3SMatthew Knepley    Input Parameter:
29f69a0ea3SMatthew Knepley .  comm - MPI communicator
307807a1faSBarry Smith 
317807a1faSBarry Smith    Output Parameter:
32dc401e71SLois Curfman McInnes .  A - the matrix
33e0b365e2SLois Curfman McInnes 
34273d9f13SBarry Smith    Options Database Keys:
35273d9f13SBarry Smith +    -mat_type seqaij   - AIJ type, uses MatCreateSeqAIJ()
36273d9f13SBarry Smith .    -mat_type mpiaij   - AIJ type, uses MatCreateMPIAIJ()
37273d9f13SBarry Smith .    -mat_type seqbdiag - block diagonal type, uses MatCreateSeqBDiag()
38273d9f13SBarry Smith .    -mat_type mpibdiag - block diagonal type, uses MatCreateMPIBDiag()
39273d9f13SBarry Smith .    -mat_type mpirowbs - rowbs type, uses MatCreateMPIRowbs()
40273d9f13SBarry Smith .    -mat_type seqdense - dense type, uses MatCreateSeqDense()
41273d9f13SBarry Smith .    -mat_type mpidense - dense type, uses MatCreateMPIDense()
42273d9f13SBarry Smith .    -mat_type seqbaij  - block AIJ type, uses MatCreateSeqBAIJ()
43273d9f13SBarry Smith -    -mat_type mpibaij  - block AIJ type, uses MatCreateMPIBAIJ()
44e0b365e2SLois Curfman McInnes 
4583e1b59cSLois Curfman McInnes    Even More Options Database Keys:
4683e1b59cSLois Curfman McInnes    See the manpages for particular formats (e.g., MatCreateSeqAIJ())
4783e1b59cSLois Curfman McInnes    for additional format-specific options.
48e0b365e2SLois Curfman McInnes 
49bd9ce289SLois Curfman McInnes    Notes:
50ec6e0d80SSatish Balay 
51273d9f13SBarry Smith    Level: beginner
52273d9f13SBarry Smith 
53a2fc510eSBarry Smith    User manual sections:
54a2fc510eSBarry Smith +   sec_matcreate
55a2fc510eSBarry Smith -   chapter_matrices
56a2fc510eSBarry Smith 
57273d9f13SBarry Smith .keywords: matrix, create
58273d9f13SBarry Smith 
59273d9f13SBarry Smith .seealso: MatCreateSeqAIJ((), MatCreateMPIAIJ(),
60273d9f13SBarry Smith           MatCreateSeqBDiag(),MatCreateMPIBDiag(),
61273d9f13SBarry Smith           MatCreateSeqDense(), MatCreateMPIDense(),
62273d9f13SBarry Smith           MatCreateMPIRowbs(), MatCreateSeqBAIJ(), MatCreateMPIBAIJ(),
63273d9f13SBarry Smith           MatCreateSeqSBAIJ(), MatCreateMPISBAIJ(),
64273d9f13SBarry Smith           MatConvert()
65273d9f13SBarry Smith @*/
66f69a0ea3SMatthew Knepley PetscErrorCode PETSCMAT_DLLEXPORT MatCreate(MPI_Comm comm,Mat *A)
67273d9f13SBarry Smith {
68273d9f13SBarry Smith   Mat            B;
69dfbe8321SBarry Smith   PetscErrorCode ierr;
70273d9f13SBarry Smith 
71273d9f13SBarry Smith   PetscFunctionBegin;
72f69a0ea3SMatthew Knepley   PetscValidPointer(A,2);
7397f1f81fSBarry Smith 
748ba1e511SMatthew Knepley   *A = PETSC_NULL;
758ba1e511SMatthew Knepley #ifndef PETSC_USE_DYNAMIC_LIBRARIES
768ba1e511SMatthew Knepley   ierr = MatInitializePackage(PETSC_NULL);CHKERRQ(ierr);
778ba1e511SMatthew Knepley #endif
788ba1e511SMatthew Knepley 
7952e6d16bSBarry Smith   ierr = PetscHeaderCreate(B,_p_Mat,struct _MatOps,MAT_COOKIE,0,"Mat",comm,MatDestroy,MatView);CHKERRQ(ierr);
80899cda47SBarry Smith   B->rmap.n             = -1;
81899cda47SBarry Smith   B->rmap.N             = -1;
82899cda47SBarry Smith   B->cmap.n             = -1;
83899cda47SBarry Smith   B->cmap.N             = -1;
84899cda47SBarry Smith   B->rmap.bs            = 1;
85899cda47SBarry Smith   B->cmap.bs            = 1;
86273d9f13SBarry Smith   B->preallocated  = PETSC_FALSE;
8735d8aa7fSBarry Smith   B->bops->publish = MatPublish_Base;
88273d9f13SBarry Smith   *A               = B;
89273d9f13SBarry Smith   PetscFunctionReturn(0);
90273d9f13SBarry Smith }
91273d9f13SBarry Smith 
924a2ae208SSatish Balay #undef __FUNCT__
93f69a0ea3SMatthew Knepley #define __FUNCT__ "MatSetSizes"
94f69a0ea3SMatthew Knepley /*@
95f69a0ea3SMatthew Knepley   MatSetSizes - Sets the local and global sizes, and checks to determine compatibility
96f69a0ea3SMatthew Knepley 
97f69a0ea3SMatthew Knepley   Collective on Mat
98f69a0ea3SMatthew Knepley 
99f69a0ea3SMatthew Knepley   Input Parameters:
100f69a0ea3SMatthew Knepley +  A - the matrix
101f69a0ea3SMatthew Knepley .  m - number of local rows (or PETSC_DECIDE)
102f69a0ea3SMatthew Knepley .  n - number of local columns (or PETSC_DECIDE)
103f69a0ea3SMatthew Knepley .  M - number of global rows (or PETSC_DETERMINE)
104f69a0ea3SMatthew Knepley -  N - number of global columns (or PETSC_DETERMINE)
105f69a0ea3SMatthew Knepley 
106f69a0ea3SMatthew Knepley    Notes:
107f69a0ea3SMatthew Knepley    m (n) and M (N) cannot be both PETSC_DECIDE
108f69a0ea3SMatthew Knepley    If one processor calls this with M (N) of PETSC_DECIDE then all processors must, otherwise the program will hang.
109f69a0ea3SMatthew Knepley 
110f69a0ea3SMatthew Knepley    If PETSC_DECIDE is not used for the arguments 'm' and 'n', then the
111f69a0ea3SMatthew Knepley    user must ensure that they are chosen to be compatible with the
112f69a0ea3SMatthew Knepley    vectors. To do this, one first considers the matrix-vector product
113f69a0ea3SMatthew Knepley    'y = A x'. The 'm' that is used in the above routine must match the
114f69a0ea3SMatthew Knepley    local size used in the vector creation routine VecCreateMPI() for 'y'.
115f69a0ea3SMatthew Knepley    Likewise, the 'n' used must match that used as the local size in
116f69a0ea3SMatthew Knepley    VecCreateMPI() for 'x'.
117f69a0ea3SMatthew Knepley 
118f69a0ea3SMatthew Knepley   Level: beginner
119f69a0ea3SMatthew Knepley 
120f69a0ea3SMatthew Knepley .seealso: MatGetSize(), PetscSplitOwnership()
121f69a0ea3SMatthew Knepley @*/
122f69a0ea3SMatthew Knepley PetscErrorCode PETSCMAT_DLLEXPORT MatSetSizes(Mat A, PetscInt m, PetscInt n, PetscInt M, PetscInt N)
123f69a0ea3SMatthew Knepley {
124284134d9SBarry Smith   PetscErrorCode ierr;
125284134d9SBarry Smith 
126f69a0ea3SMatthew Knepley   PetscFunctionBegin;
127f69a0ea3SMatthew Knepley   PetscValidHeaderSpecific(A,MAT_COOKIE,1);
128f69a0ea3SMatthew Knepley   if (M > 0 && m > M) SETERRQ2(PETSC_ERR_ARG_INCOMP,"Local column size %D cannot be larger than global column size %D",m,M);
129f69a0ea3SMatthew Knepley   if (N > 0 && n > N) SETERRQ2(PETSC_ERR_ARG_INCOMP,"Local row size %D cannot be larger than global row size %D",n,N);
130284134d9SBarry Smith   if (A->ops->setsizes) {
131284134d9SBarry Smith     /* Since this will not be set until the type has been set, this will NOT be called on the initial
132284134d9SBarry Smith        call of MatSetSizes() (which must be called BEFORE MatSetType() */
133284134d9SBarry Smith     ierr = (*A->ops->setsizes)(A,m,n,M,N);CHKERRQ(ierr);
134284134d9SBarry Smith   } else {
135899cda47SBarry Smith     if ((A->rmap.n >= 0 || A->rmap.N >= 0) && (A->rmap.n != m || A->rmap.N != M)) SETERRQ4(PETSC_ERR_SUP,"Cannot change/reset row sizes to %D local %D global after previously setting them to %D local %D global",m,M,A->rmap.n,A->rmap.N);
136899cda47SBarry Smith     if ((A->cmap.n >= 0 || A->cmap.N >= 0) && (A->cmap.n != n || A->cmap.N != N)) SETERRQ4(PETSC_ERR_SUP,"Cannot change/reset column sizes to %D local %D global after previously setting them to %D local %D global",n,N,A->cmap.n,A->cmap.N);
137284134d9SBarry Smith   }
138899cda47SBarry Smith   A->rmap.n = m;
139899cda47SBarry Smith   A->cmap.n = n;
140899cda47SBarry Smith   A->rmap.N = M;
141899cda47SBarry Smith   A->cmap.N = N;
142f69a0ea3SMatthew Knepley   PetscFunctionReturn(0);
143f69a0ea3SMatthew Knepley }
144f69a0ea3SMatthew Knepley 
145f69a0ea3SMatthew Knepley #undef __FUNCT__
1464a2ae208SSatish Balay #define __FUNCT__ "MatSetFromOptions"
14705869f15SSatish Balay /*@
148273d9f13SBarry Smith    MatSetFromOptions - Creates a matrix where the type is determined
149273d9f13SBarry Smith    from the options database. Generates a parallel MPI matrix if the
150273d9f13SBarry Smith    communicator has more than one processor.  The default matrix type is
1517e5f4302SBarry Smith    AIJ, using the routines MatCreateSeqAIJ() and MatCreateMPIAIJ() if
1527e5f4302SBarry Smith    you do not select a type in the options database.
153273d9f13SBarry Smith 
154273d9f13SBarry Smith    Collective on Mat
155273d9f13SBarry Smith 
156273d9f13SBarry Smith    Input Parameter:
157273d9f13SBarry Smith .  A - the matrix
158273d9f13SBarry Smith 
159273d9f13SBarry Smith    Options Database Keys:
160273d9f13SBarry Smith +    -mat_type seqaij   - AIJ type, uses MatCreateSeqAIJ()
161273d9f13SBarry Smith .    -mat_type mpiaij   - AIJ type, uses MatCreateMPIAIJ()
162273d9f13SBarry Smith .    -mat_type seqbdiag - block diagonal type, uses MatCreateSeqBDiag()
163273d9f13SBarry Smith .    -mat_type mpibdiag - block diagonal type, uses MatCreateMPIBDiag()
164273d9f13SBarry Smith .    -mat_type mpirowbs - rowbs type, uses MatCreateMPIRowbs()
165273d9f13SBarry Smith .    -mat_type seqdense - dense type, uses MatCreateSeqDense()
166273d9f13SBarry Smith .    -mat_type mpidense - dense type, uses MatCreateMPIDense()
167273d9f13SBarry Smith .    -mat_type seqbaij  - block AIJ type, uses MatCreateSeqBAIJ()
168273d9f13SBarry Smith -    -mat_type mpibaij  - block AIJ type, uses MatCreateMPIBAIJ()
169273d9f13SBarry Smith 
170273d9f13SBarry Smith    Even More Options Database Keys:
171273d9f13SBarry Smith    See the manpages for particular formats (e.g., MatCreateSeqAIJ())
172273d9f13SBarry Smith    for additional format-specific options.
173bd9ce289SLois Curfman McInnes 
1741d69843bSLois Curfman McInnes    Level: beginner
1751d69843bSLois Curfman McInnes 
176dc401e71SLois Curfman McInnes .keywords: matrix, create
177e0b365e2SLois Curfman McInnes 
178fafbff53SBarry Smith .seealso: MatCreateSeqAIJ((), MatCreateMPIAIJ(),
179fafbff53SBarry Smith           MatCreateSeqBDiag(),MatCreateMPIBDiag(),
18039ddd567SLois Curfman McInnes           MatCreateSeqDense(), MatCreateMPIDense(),
181a209d233SLois Curfman McInnes           MatCreateMPIRowbs(), MatCreateSeqBAIJ(), MatCreateMPIBAIJ(),
182a209d233SLois Curfman McInnes           MatCreateSeqSBAIJ(), MatCreateMPISBAIJ(),
183273d9f13SBarry Smith           MatConvert()
1847807a1faSBarry Smith @*/
185be1d678aSKris Buschelman PetscErrorCode PETSCMAT_DLLEXPORT MatSetFromOptions(Mat B)
1867807a1faSBarry Smith {
187dfbe8321SBarry Smith   PetscErrorCode ierr;
188273d9f13SBarry Smith   char           mtype[256];
189273d9f13SBarry Smith   PetscTruth     flg;
190dbb450caSBarry Smith 
1913a40ed3dSBarry Smith   PetscFunctionBegin;
192b0a32e0cSBarry Smith   ierr = PetscOptionsGetString(B->prefix,"-mat_type",mtype,256,&flg);CHKERRQ(ierr);
193273d9f13SBarry Smith   if (flg) {
194273d9f13SBarry Smith     ierr = MatSetType(B,mtype);CHKERRQ(ierr);
195273d9f13SBarry Smith   }
196*593c1905SSatish Balay   if (!B->type_name) {
197*593c1905SSatish Balay     ierr = MatSetType(B,MATAIJ);CHKERRQ(ierr);
198*593c1905SSatish Balay   }
1993a40ed3dSBarry Smith   PetscFunctionReturn(0);
2007807a1faSBarry Smith }
2017807a1faSBarry Smith 
2024a2ae208SSatish Balay #undef __FUNCT__
2034a2ae208SSatish Balay #define __FUNCT__ "MatSetUpPreallocation"
204273d9f13SBarry Smith /*@C
205273d9f13SBarry Smith    MatSetUpPreallocation
206dae03382SLois Curfman McInnes 
207273d9f13SBarry Smith    Collective on Mat
208dae03382SLois Curfman McInnes 
209273d9f13SBarry Smith    Input Parameter:
210273d9f13SBarry Smith .  A - the matrix
211d5d45c9bSBarry Smith 
212273d9f13SBarry Smith    Level: beginner
213d5d45c9bSBarry Smith 
214273d9f13SBarry Smith .keywords: matrix, create
215273d9f13SBarry Smith 
216273d9f13SBarry Smith .seealso: MatCreateSeqAIJ((), MatCreateMPIAIJ(),
217273d9f13SBarry Smith           MatCreateSeqBDiag(),MatCreateMPIBDiag(),
218273d9f13SBarry Smith           MatCreateSeqDense(), MatCreateMPIDense(),
219273d9f13SBarry Smith           MatCreateMPIRowbs(), MatCreateSeqBAIJ(), MatCreateMPIBAIJ(),
220273d9f13SBarry Smith           MatCreateSeqSBAIJ(), MatCreateMPISBAIJ(),
221273d9f13SBarry Smith           MatConvert()
222273d9f13SBarry Smith @*/
223be1d678aSKris Buschelman PetscErrorCode PETSCMAT_DLLEXPORT MatSetUpPreallocation(Mat B)
224273d9f13SBarry Smith {
225dfbe8321SBarry Smith   PetscErrorCode ierr;
226273d9f13SBarry Smith 
227273d9f13SBarry Smith   PetscFunctionBegin;
22817667f90SBarry Smith   if (!B->preallocated && B->ops->setuppreallocation) {
229ae15b995SBarry Smith     ierr = PetscInfo(B,"Warning not preallocating matrix storage\n");CHKERRQ(ierr);
230273d9f13SBarry Smith     ierr = (*B->ops->setuppreallocation)(B);CHKERRQ(ierr);
231273d9f13SBarry Smith   }
232210f0121SBarry Smith   B->preallocated = PETSC_TRUE;
233273d9f13SBarry Smith   PetscFunctionReturn(0);
234273d9f13SBarry Smith }
235273d9f13SBarry Smith 
236273d9f13SBarry Smith /*
237273d9f13SBarry Smith         Copies from Cs header to A
238273d9f13SBarry Smith */
2394a2ae208SSatish Balay #undef __FUNCT__
2404a2ae208SSatish Balay #define __FUNCT__ "MatHeaderCopy"
241dfbe8321SBarry Smith PetscErrorCode MatHeaderCopy(Mat A,Mat C)
242273d9f13SBarry Smith {
243dfbe8321SBarry Smith   PetscErrorCode ierr;
244d44834fbSBarry Smith   PetscInt       refct;
245273d9f13SBarry Smith   PetscOps       *Abops;
246273d9f13SBarry Smith   MatOps         Aops;
247273d9f13SBarry Smith   char           *mtype,*mname;
24830735b05SKris Buschelman   void           *spptr;
249273d9f13SBarry Smith 
250273d9f13SBarry Smith   PetscFunctionBegin;
251273d9f13SBarry Smith   /* free all the interior data structures from mat */
252273d9f13SBarry Smith   ierr = (*A->ops->destroy)(A);CHKERRQ(ierr);
253273d9f13SBarry Smith 
254273d9f13SBarry Smith   /* save the parts of A we need */
255273d9f13SBarry Smith   Abops = A->bops;
256273d9f13SBarry Smith   Aops  = A->ops;
257273d9f13SBarry Smith   refct = A->refct;
258273d9f13SBarry Smith   mtype = A->type_name;
259273d9f13SBarry Smith   mname = A->name;
26030735b05SKris Buschelman   spptr = A->spptr;
26130735b05SKris Buschelman 
26230735b05SKris Buschelman   ierr = PetscFree(C->spptr);CHKERRQ(ierr);
26305b42c5fSBarry Smith 
264357abbc8SBarry Smith   ierr = PetscFree(A->rmap.range);CHKERRQ(ierr);
265357abbc8SBarry Smith   ierr = PetscFree(A->cmap.range);CHKERRQ(ierr);
266273d9f13SBarry Smith 
267273d9f13SBarry Smith   /* copy C over to A */
268273d9f13SBarry Smith   ierr  = PetscMemcpy(A,C,sizeof(struct _p_Mat));CHKERRQ(ierr);
269273d9f13SBarry Smith 
270273d9f13SBarry Smith   /* return the parts of A we saved */
271273d9f13SBarry Smith   A->bops      = Abops;
272273d9f13SBarry Smith   A->ops       = Aops;
273273d9f13SBarry Smith   A->qlist     = 0;
274273d9f13SBarry Smith   A->refct     = refct;
275273d9f13SBarry Smith   A->type_name = mtype;
276273d9f13SBarry Smith   A->name      = mname;
27730735b05SKris Buschelman   A->spptr     = spptr;
278273d9f13SBarry Smith 
279d38fa0fbSBarry Smith   ierr = PetscHeaderDestroy(C);CHKERRQ(ierr);
280273d9f13SBarry Smith   PetscFunctionReturn(0);
281273d9f13SBarry Smith }
2828ab5b326SKris Buschelman /*
2838ab5b326SKris Buschelman         Replace A's header with that of C
2848ab5b326SKris Buschelman         This is essentially code moved from MatDestroy
2858ab5b326SKris Buschelman */
2868ab5b326SKris Buschelman #undef __FUNCT__
2878ab5b326SKris Buschelman #define __FUNCT__ "MatHeaderReplace"
2888ab5b326SKris Buschelman PetscErrorCode MatHeaderReplace(Mat A,Mat C)
2898ab5b326SKris Buschelman {
2908ab5b326SKris Buschelman   PetscErrorCode ierr;
2918ab5b326SKris Buschelman 
2928ab5b326SKris Buschelman   PetscFunctionBegin;
2938ab5b326SKris Buschelman   /* free all the interior data structures from mat */
2948ab5b326SKris Buschelman   ierr = (*A->ops->destroy)(A);CHKERRQ(ierr);
295d2c95936SBarry Smith   ierr = PetscHeaderDestroy_Private((PetscObject)A);CHKERRQ(ierr);
296357abbc8SBarry Smith   ierr = PetscFree(A->rmap.range);CHKERRQ(ierr);
297357abbc8SBarry Smith   ierr = PetscFree(A->cmap.range);CHKERRQ(ierr);
298d95db058SSatish Balay   ierr = PetscFree(A->spptr);CHKERRQ(ierr);
2998ab5b326SKris Buschelman 
3008ab5b326SKris Buschelman   /* copy C over to A */
3018ab5b326SKris Buschelman   if (C) {
3028ab5b326SKris Buschelman     ierr = PetscMemcpy(A,C,sizeof(struct _p_Mat));CHKERRQ(ierr);
3038ab5b326SKris Buschelman     ierr = PetscLogObjectDestroy((PetscObject)C);CHKERRQ(ierr);
3048ab5b326SKris Buschelman     ierr = PetscFree(C);CHKERRQ(ierr);
3058ab5b326SKris Buschelman   }
3068ab5b326SKris Buschelman   PetscFunctionReturn(0);
3078ab5b326SKris Buschelman }
308