xref: /petsc/src/mat/utils/gcreate.c (revision 5c9eb25f753630cfd361293e05e7358a00a954ac)
1be1d678aSKris Buschelman #define PETSCMAT_DLL
27807a1faSBarry Smith 
3b9147fbbSdalcinl #include "include/private/matimpl.h"       /*I "petscmat.h"  I*/
4325e03aeSBarry Smith #include "petscsys.h"
57807a1faSBarry Smith 
67adad957SLisandro Dalcin #if 0
74a2ae208SSatish Balay #undef __FUNCT__
84a2ae208SSatish Balay #define __FUNCT__ "MatPublish_Base"
96849ba73SBarry Smith static PetscErrorCode MatPublish_Base(PetscObject obj)
1035d8aa7fSBarry Smith {
1135d8aa7fSBarry Smith   PetscFunctionBegin;
1235d8aa7fSBarry Smith   PetscFunctionReturn(0);
1335d8aa7fSBarry Smith }
147adad957SLisandro Dalcin #endif
1535d8aa7fSBarry Smith 
164a2ae208SSatish Balay #undef __FUNCT__
174a2ae208SSatish Balay #define __FUNCT__ "MatCreate"
1805869f15SSatish Balay /*@
1969dd0797SLois Curfman McInnes    MatCreate - Creates a matrix where the type is determined
207e5f4302SBarry Smith    from either a call to MatSetType() or from the options database
217e5f4302SBarry Smith    with a call to MatSetFromOptions(). The default matrix type is
227e5f4302SBarry Smith    AIJ, using the routines MatCreateSeqAIJ() or MatCreateMPIAIJ()
237e5f4302SBarry Smith    if you do not set a type in the options database. If you never
247e5f4302SBarry Smith    call MatSetType() or MatSetFromOptions() it will generate an
25f8ab6608SSatish Balay    error when you try to use the matrix.
2683e1b59cSLois Curfman McInnes 
27cb13003dSBarry Smith    Collective on MPI_Comm
28cb13003dSBarry Smith 
29f69a0ea3SMatthew Knepley    Input Parameter:
30f69a0ea3SMatthew Knepley .  comm - MPI communicator
317807a1faSBarry Smith 
327807a1faSBarry Smith    Output Parameter:
33dc401e71SLois Curfman McInnes .  A - the matrix
34e0b365e2SLois Curfman McInnes 
35273d9f13SBarry Smith    Options Database Keys:
36273d9f13SBarry Smith +    -mat_type seqaij   - AIJ type, uses MatCreateSeqAIJ()
37273d9f13SBarry Smith .    -mat_type mpiaij   - AIJ type, uses MatCreateMPIAIJ()
38273d9f13SBarry Smith .    -mat_type mpirowbs - rowbs type, uses MatCreateMPIRowbs()
39273d9f13SBarry Smith .    -mat_type seqdense - dense type, uses MatCreateSeqDense()
40273d9f13SBarry Smith .    -mat_type mpidense - dense type, uses MatCreateMPIDense()
41273d9f13SBarry Smith .    -mat_type seqbaij  - block AIJ type, uses MatCreateSeqBAIJ()
42273d9f13SBarry Smith -    -mat_type mpibaij  - block AIJ type, uses MatCreateMPIBAIJ()
43e0b365e2SLois Curfman McInnes 
4483e1b59cSLois Curfman McInnes    Even More Options Database Keys:
4583e1b59cSLois Curfman McInnes    See the manpages for particular formats (e.g., MatCreateSeqAIJ())
4683e1b59cSLois Curfman McInnes    for additional format-specific options.
47e0b365e2SLois Curfman McInnes 
48bd9ce289SLois Curfman McInnes    Notes:
49ec6e0d80SSatish Balay 
50273d9f13SBarry Smith    Level: beginner
51273d9f13SBarry Smith 
52a2fc510eSBarry Smith    User manual sections:
53a2fc510eSBarry Smith +   sec_matcreate
54a2fc510eSBarry Smith -   chapter_matrices
55a2fc510eSBarry Smith 
56273d9f13SBarry Smith .keywords: matrix, create
57273d9f13SBarry Smith 
58cd05a4c0SHong Zhang .seealso: MatCreateSeqAIJ(), MatCreateMPIAIJ(),
59273d9f13SBarry Smith           MatCreateSeqDense(), MatCreateMPIDense(),
60273d9f13SBarry Smith           MatCreateMPIRowbs(), MatCreateSeqBAIJ(), MatCreateMPIBAIJ(),
61273d9f13SBarry Smith           MatCreateSeqSBAIJ(), MatCreateMPISBAIJ(),
62273d9f13SBarry Smith           MatConvert()
63273d9f13SBarry Smith @*/
64f69a0ea3SMatthew Knepley PetscErrorCode PETSCMAT_DLLEXPORT MatCreate(MPI_Comm comm,Mat *A)
65273d9f13SBarry Smith {
66273d9f13SBarry Smith   Mat            B;
67dfbe8321SBarry Smith   PetscErrorCode ierr;
68273d9f13SBarry Smith 
69273d9f13SBarry Smith   PetscFunctionBegin;
70f69a0ea3SMatthew Knepley   PetscValidPointer(A,2);
7197f1f81fSBarry Smith 
728ba1e511SMatthew Knepley   *A = PETSC_NULL;
738ba1e511SMatthew Knepley #ifndef PETSC_USE_DYNAMIC_LIBRARIES
748ba1e511SMatthew Knepley   ierr = MatInitializePackage(PETSC_NULL);CHKERRQ(ierr);
758ba1e511SMatthew Knepley #endif
768ba1e511SMatthew Knepley 
7752e6d16bSBarry Smith   ierr = PetscHeaderCreate(B,_p_Mat,struct _MatOps,MAT_COOKIE,0,"Mat",comm,MatDestroy,MatView);CHKERRQ(ierr);
786148ca0dSBarry Smith   ierr = PetscMapInitialize(comm,&B->rmap);CHKERRQ(ierr);
796148ca0dSBarry Smith   ierr = PetscMapInitialize(comm,&B->cmap);CHKERRQ(ierr);
80273d9f13SBarry Smith   B->preallocated  = PETSC_FALSE;
81273d9f13SBarry Smith   *A               = B;
82273d9f13SBarry Smith   PetscFunctionReturn(0);
83273d9f13SBarry Smith }
84273d9f13SBarry Smith 
854a2ae208SSatish Balay #undef __FUNCT__
86f69a0ea3SMatthew Knepley #define __FUNCT__ "MatSetSizes"
87f69a0ea3SMatthew Knepley /*@
88f69a0ea3SMatthew Knepley   MatSetSizes - Sets the local and global sizes, and checks to determine compatibility
89f69a0ea3SMatthew Knepley 
90f69a0ea3SMatthew Knepley   Collective on Mat
91f69a0ea3SMatthew Knepley 
92f69a0ea3SMatthew Knepley   Input Parameters:
93f69a0ea3SMatthew Knepley +  A - the matrix
94f69a0ea3SMatthew Knepley .  m - number of local rows (or PETSC_DECIDE)
95f69a0ea3SMatthew Knepley .  n - number of local columns (or PETSC_DECIDE)
96f69a0ea3SMatthew Knepley .  M - number of global rows (or PETSC_DETERMINE)
97f69a0ea3SMatthew Knepley -  N - number of global columns (or PETSC_DETERMINE)
98f69a0ea3SMatthew Knepley 
99f69a0ea3SMatthew Knepley    Notes:
100f69a0ea3SMatthew Knepley    m (n) and M (N) cannot be both PETSC_DECIDE
101f69a0ea3SMatthew Knepley    If one processor calls this with M (N) of PETSC_DECIDE then all processors must, otherwise the program will hang.
102f69a0ea3SMatthew Knepley 
103f69a0ea3SMatthew Knepley    If PETSC_DECIDE is not used for the arguments 'm' and 'n', then the
104f69a0ea3SMatthew Knepley    user must ensure that they are chosen to be compatible with the
105f69a0ea3SMatthew Knepley    vectors. To do this, one first considers the matrix-vector product
106f69a0ea3SMatthew Knepley    'y = A x'. The 'm' that is used in the above routine must match the
107f69a0ea3SMatthew Knepley    local size used in the vector creation routine VecCreateMPI() for 'y'.
108f69a0ea3SMatthew Knepley    Likewise, the 'n' used must match that used as the local size in
109f69a0ea3SMatthew Knepley    VecCreateMPI() for 'x'.
110f69a0ea3SMatthew Knepley 
111f69a0ea3SMatthew Knepley   Level: beginner
112f69a0ea3SMatthew Knepley 
113f69a0ea3SMatthew Knepley .seealso: MatGetSize(), PetscSplitOwnership()
114f69a0ea3SMatthew Knepley @*/
115f69a0ea3SMatthew Knepley PetscErrorCode PETSCMAT_DLLEXPORT MatSetSizes(Mat A, PetscInt m, PetscInt n, PetscInt M, PetscInt N)
116f69a0ea3SMatthew Knepley {
117284134d9SBarry Smith   PetscErrorCode ierr;
118284134d9SBarry Smith 
119f69a0ea3SMatthew Knepley   PetscFunctionBegin;
120f69a0ea3SMatthew Knepley   PetscValidHeaderSpecific(A,MAT_COOKIE,1);
121f69a0ea3SMatthew Knepley   if (M > 0 && m > M) SETERRQ2(PETSC_ERR_ARG_INCOMP,"Local column size %D cannot be larger than global column size %D",m,M);
122f69a0ea3SMatthew Knepley   if (N > 0 && n > N) SETERRQ2(PETSC_ERR_ARG_INCOMP,"Local row size %D cannot be larger than global row size %D",n,N);
123284134d9SBarry Smith   if (A->ops->setsizes) {
124284134d9SBarry Smith     /* Since this will not be set until the type has been set, this will NOT be called on the initial
125284134d9SBarry Smith        call of MatSetSizes() (which must be called BEFORE MatSetType() */
126284134d9SBarry Smith     ierr = (*A->ops->setsizes)(A,m,n,M,N);CHKERRQ(ierr);
127284134d9SBarry Smith   } else {
128899cda47SBarry Smith     if ((A->rmap.n >= 0 || A->rmap.N >= 0) && (A->rmap.n != m || A->rmap.N != M)) SETERRQ4(PETSC_ERR_SUP,"Cannot change/reset row sizes to %D local %D global after previously setting them to %D local %D global",m,M,A->rmap.n,A->rmap.N);
129899cda47SBarry Smith     if ((A->cmap.n >= 0 || A->cmap.N >= 0) && (A->cmap.n != n || A->cmap.N != N)) SETERRQ4(PETSC_ERR_SUP,"Cannot change/reset column sizes to %D local %D global after previously setting them to %D local %D global",n,N,A->cmap.n,A->cmap.N);
130284134d9SBarry Smith   }
131899cda47SBarry Smith   A->rmap.n = m;
132899cda47SBarry Smith   A->cmap.n = n;
133899cda47SBarry Smith   A->rmap.N = M;
134899cda47SBarry Smith   A->cmap.N = N;
135f69a0ea3SMatthew Knepley   PetscFunctionReturn(0);
136f69a0ea3SMatthew Knepley }
137f69a0ea3SMatthew Knepley 
138f69a0ea3SMatthew Knepley #undef __FUNCT__
1394a2ae208SSatish Balay #define __FUNCT__ "MatSetFromOptions"
14005869f15SSatish Balay /*@
141273d9f13SBarry Smith    MatSetFromOptions - Creates a matrix where the type is determined
142273d9f13SBarry Smith    from the options database. Generates a parallel MPI matrix if the
143273d9f13SBarry Smith    communicator has more than one processor.  The default matrix type is
1447e5f4302SBarry Smith    AIJ, using the routines MatCreateSeqAIJ() and MatCreateMPIAIJ() if
1457e5f4302SBarry Smith    you do not select a type in the options database.
146273d9f13SBarry Smith 
147273d9f13SBarry Smith    Collective on Mat
148273d9f13SBarry Smith 
149273d9f13SBarry Smith    Input Parameter:
150273d9f13SBarry Smith .  A - the matrix
151273d9f13SBarry Smith 
152273d9f13SBarry Smith    Options Database Keys:
153273d9f13SBarry Smith +    -mat_type seqaij   - AIJ type, uses MatCreateSeqAIJ()
154273d9f13SBarry Smith .    -mat_type mpiaij   - AIJ type, uses MatCreateMPIAIJ()
155273d9f13SBarry Smith .    -mat_type mpirowbs - rowbs type, uses MatCreateMPIRowbs()
156273d9f13SBarry Smith .    -mat_type seqdense - dense type, uses MatCreateSeqDense()
157273d9f13SBarry Smith .    -mat_type mpidense - dense type, uses MatCreateMPIDense()
158273d9f13SBarry Smith .    -mat_type seqbaij  - block AIJ type, uses MatCreateSeqBAIJ()
159273d9f13SBarry Smith -    -mat_type mpibaij  - block AIJ type, uses MatCreateMPIBAIJ()
160273d9f13SBarry Smith 
161273d9f13SBarry Smith    Even More Options Database Keys:
162273d9f13SBarry Smith    See the manpages for particular formats (e.g., MatCreateSeqAIJ())
163273d9f13SBarry Smith    for additional format-specific options.
164bd9ce289SLois Curfman McInnes 
1651d69843bSLois Curfman McInnes    Level: beginner
1661d69843bSLois Curfman McInnes 
167dc401e71SLois Curfman McInnes .keywords: matrix, create
168e0b365e2SLois Curfman McInnes 
169fafbff53SBarry Smith .seealso: MatCreateSeqAIJ((), MatCreateMPIAIJ(),
17039ddd567SLois Curfman McInnes           MatCreateSeqDense(), MatCreateMPIDense(),
171a209d233SLois Curfman McInnes           MatCreateMPIRowbs(), MatCreateSeqBAIJ(), MatCreateMPIBAIJ(),
172a209d233SLois Curfman McInnes           MatCreateSeqSBAIJ(), MatCreateMPISBAIJ(),
173273d9f13SBarry Smith           MatConvert()
1747807a1faSBarry Smith @*/
175be1d678aSKris Buschelman PetscErrorCode PETSCMAT_DLLEXPORT MatSetFromOptions(Mat B)
1767807a1faSBarry Smith {
177dfbe8321SBarry Smith   PetscErrorCode ierr;
178f3be49caSLisandro Dalcin   const char     *deft = MATAIJ;
179f3be49caSLisandro Dalcin   char           type[256];
180273d9f13SBarry Smith   PetscTruth     flg;
181dbb450caSBarry Smith 
1823a40ed3dSBarry Smith   PetscFunctionBegin;
183f3be49caSLisandro Dalcin   PetscValidHeaderSpecific(B,MAT_COOKIE,1);
184f3be49caSLisandro Dalcin 
185f3be49caSLisandro Dalcin   ierr = PetscOptionsBegin(((PetscObject)B)->comm,((PetscObject)B)->prefix,"Matrix options","Mat");CHKERRQ(ierr);
186f3be49caSLisandro Dalcin     ierr = PetscOptionsList("-mat_type","Matrix type","MatSetType",MatList,deft,type,256,&flg);CHKERRQ(ierr);
187273d9f13SBarry Smith     if (flg) {
188f3be49caSLisandro Dalcin       ierr = MatSetType(B,type);CHKERRQ(ierr);
189f3be49caSLisandro Dalcin     } else if (!((PetscObject)B)->type_name) {
190f3be49caSLisandro Dalcin       ierr = MatSetType(B,deft);CHKERRQ(ierr);
191273d9f13SBarry Smith     }
192f3be49caSLisandro Dalcin 
193f3be49caSLisandro Dalcin     if (B->ops->setfromoptions) {
194f3be49caSLisandro Dalcin       ierr = (*B->ops->setfromoptions)(B);CHKERRQ(ierr);
195593c1905SSatish Balay     }
196f3be49caSLisandro Dalcin 
197f3be49caSLisandro Dalcin   ierr = PetscOptionsEnd();CHKERRQ(ierr);
198f3be49caSLisandro Dalcin 
1993a40ed3dSBarry Smith   PetscFunctionReturn(0);
2007807a1faSBarry Smith }
2017807a1faSBarry Smith 
2024a2ae208SSatish Balay #undef __FUNCT__
2034a2ae208SSatish Balay #define __FUNCT__ "MatSetUpPreallocation"
204bc08b0f1SBarry Smith /*@
205273d9f13SBarry Smith    MatSetUpPreallocation
206dae03382SLois Curfman McInnes 
207273d9f13SBarry Smith    Collective on Mat
208dae03382SLois Curfman McInnes 
209273d9f13SBarry Smith    Input Parameter:
210273d9f13SBarry Smith .  A - the matrix
211d5d45c9bSBarry Smith 
212273d9f13SBarry Smith    Level: beginner
213d5d45c9bSBarry Smith 
214273d9f13SBarry Smith .keywords: matrix, create
215273d9f13SBarry Smith 
216273d9f13SBarry Smith .seealso: MatCreateSeqAIJ((), MatCreateMPIAIJ(),
217273d9f13SBarry Smith           MatCreateSeqDense(), MatCreateMPIDense(),
218273d9f13SBarry Smith           MatCreateMPIRowbs(), MatCreateSeqBAIJ(), MatCreateMPIBAIJ(),
219273d9f13SBarry Smith           MatCreateSeqSBAIJ(), MatCreateMPISBAIJ(),
220273d9f13SBarry Smith           MatConvert()
221273d9f13SBarry Smith @*/
222be1d678aSKris Buschelman PetscErrorCode PETSCMAT_DLLEXPORT MatSetUpPreallocation(Mat B)
223273d9f13SBarry Smith {
224dfbe8321SBarry Smith   PetscErrorCode ierr;
225273d9f13SBarry Smith 
226273d9f13SBarry Smith   PetscFunctionBegin;
22717667f90SBarry Smith   if (!B->preallocated && B->ops->setuppreallocation) {
228ae15b995SBarry Smith     ierr = PetscInfo(B,"Warning not preallocating matrix storage\n");CHKERRQ(ierr);
229273d9f13SBarry Smith     ierr = (*B->ops->setuppreallocation)(B);CHKERRQ(ierr);
230273d9f13SBarry Smith   }
231210f0121SBarry Smith   B->preallocated = PETSC_TRUE;
232273d9f13SBarry Smith   PetscFunctionReturn(0);
233273d9f13SBarry Smith }
234273d9f13SBarry Smith 
235273d9f13SBarry Smith /*
236273d9f13SBarry Smith         Copies from Cs header to A
237273d9f13SBarry Smith */
2384a2ae208SSatish Balay #undef __FUNCT__
2394a2ae208SSatish Balay #define __FUNCT__ "MatHeaderCopy"
240dfbe8321SBarry Smith PetscErrorCode MatHeaderCopy(Mat A,Mat C)
241273d9f13SBarry Smith {
242dfbe8321SBarry Smith   PetscErrorCode ierr;
243d44834fbSBarry Smith   PetscInt       refct;
244273d9f13SBarry Smith   PetscOps       *Abops;
245273d9f13SBarry Smith   MatOps         Aops;
246273d9f13SBarry Smith   char           *mtype,*mname;
24730735b05SKris Buschelman   void           *spptr;
248273d9f13SBarry Smith 
249273d9f13SBarry Smith   PetscFunctionBegin;
250273d9f13SBarry Smith   /* save the parts of A we need */
2517adad957SLisandro Dalcin   Abops = ((PetscObject)A)->bops;
252273d9f13SBarry Smith   Aops  = A->ops;
2537adad957SLisandro Dalcin   refct = ((PetscObject)A)->refct;
254*5c9eb25fSBarry Smith   mtype = ((PetscObject)A)->type_name;
255*5c9eb25fSBarry Smith   mname = ((PetscObject)A)->name;
25630735b05SKris Buschelman   spptr = A->spptr;
25730735b05SKris Buschelman 
258*5c9eb25fSBarry Smith   /* zero these so the destroy below does not free them */
259*5c9eb25fSBarry Smith   ((PetscObject)A)->type_name = 0;
260*5c9eb25fSBarry Smith   ((PetscObject)A)->name      = 0;
261*5c9eb25fSBarry Smith 
2627c99f97cSSatish Balay   /* free all the interior data structures from mat */
2637c99f97cSSatish Balay   ierr = (*A->ops->destroy)(A);CHKERRQ(ierr);
2647c99f97cSSatish Balay 
26530735b05SKris Buschelman   ierr = PetscFree(C->spptr);CHKERRQ(ierr);
26605b42c5fSBarry Smith 
267357abbc8SBarry Smith   ierr = PetscFree(A->rmap.range);CHKERRQ(ierr);
268357abbc8SBarry Smith   ierr = PetscFree(A->cmap.range);CHKERRQ(ierr);
269*5c9eb25fSBarry Smith   ierr = PetscFListDestroy(&((PetscObject)A)->qlist);CHKERRQ(ierr);
270*5c9eb25fSBarry Smith   ierr = PetscOListDestroy(((PetscObject)A)->olist);CHKERRQ(ierr);
271273d9f13SBarry Smith 
272273d9f13SBarry Smith   /* copy C over to A */
273273d9f13SBarry Smith   ierr  = PetscMemcpy(A,C,sizeof(struct _p_Mat));CHKERRQ(ierr);
274273d9f13SBarry Smith 
275273d9f13SBarry Smith   /* return the parts of A we saved */
2767adad957SLisandro Dalcin   ((PetscObject)A)->bops      = Abops;
277273d9f13SBarry Smith   A->ops                      = Aops;
2787adad957SLisandro Dalcin   ((PetscObject)A)->refct     = refct;
2797adad957SLisandro Dalcin   ((PetscObject)A)->type_name = mtype;
2807adad957SLisandro Dalcin   ((PetscObject)A)->name      = mname;
28130735b05SKris Buschelman   A->spptr                    = spptr;
282273d9f13SBarry Smith 
283*5c9eb25fSBarry Smith   /* since these two are copied into A we do not want them destroyed in C */
284*5c9eb25fSBarry Smith   ((PetscObject)C)->qlist = 0;
285*5c9eb25fSBarry Smith   ((PetscObject)C)->olist = 0;
286d38fa0fbSBarry Smith   ierr = PetscHeaderDestroy(C);CHKERRQ(ierr);
287273d9f13SBarry Smith   PetscFunctionReturn(0);
288273d9f13SBarry Smith }
2898ab5b326SKris Buschelman /*
2908ab5b326SKris Buschelman         Replace A's header with that of C
2918ab5b326SKris Buschelman         This is essentially code moved from MatDestroy
2928ab5b326SKris Buschelman */
2938ab5b326SKris Buschelman #undef __FUNCT__
2948ab5b326SKris Buschelman #define __FUNCT__ "MatHeaderReplace"
2958ab5b326SKris Buschelman PetscErrorCode MatHeaderReplace(Mat A,Mat C)
2968ab5b326SKris Buschelman {
2978ab5b326SKris Buschelman   PetscErrorCode ierr;
2988ab5b326SKris Buschelman 
2998ab5b326SKris Buschelman   PetscFunctionBegin;
3008ab5b326SKris Buschelman   /* free all the interior data structures from mat */
3018ab5b326SKris Buschelman   ierr = (*A->ops->destroy)(A);CHKERRQ(ierr);
302d2c95936SBarry Smith   ierr = PetscHeaderDestroy_Private((PetscObject)A);CHKERRQ(ierr);
303c650bb5fSLisandro Dalcin   ierr = PetscFree(A->ops);CHKERRQ(ierr);
304357abbc8SBarry Smith   ierr = PetscFree(A->rmap.range);CHKERRQ(ierr);
305357abbc8SBarry Smith   ierr = PetscFree(A->cmap.range);CHKERRQ(ierr);
306d95db058SSatish Balay   ierr = PetscFree(A->spptr);CHKERRQ(ierr);
3078ab5b326SKris Buschelman 
3088ab5b326SKris Buschelman   /* copy C over to A */
3098ab5b326SKris Buschelman   if (C) {
3108ab5b326SKris Buschelman     ierr = PetscMemcpy(A,C,sizeof(struct _p_Mat));CHKERRQ(ierr);
3118ab5b326SKris Buschelman     ierr = PetscLogObjectDestroy((PetscObject)C);CHKERRQ(ierr);
3128ab5b326SKris Buschelman     ierr = PetscFree(C);CHKERRQ(ierr);
3138ab5b326SKris Buschelman   }
3148ab5b326SKris Buschelman   PetscFunctionReturn(0);
3158ab5b326SKris Buschelman }
316