xref: /petsc/src/snes/interface/snes.c (revision 1d27aa22b2f6148b2c4e3f06a75e0638d6493e09)
1af0996ceSBarry Smith #include <petsc/private/snesimpl.h> /*I "petscsnes.h"  I*/
207475bc1SBarry Smith #include <petscdmshell.h>
3d96771aaSLisandro Dalcin #include <petscdraw.h>
4a01aa210SMatthew G. Knepley #include <petscds.h>
534b4d3a8SMatthew G. Knepley #include <petscdmadaptor.h>
606fc46c8SMatthew G. Knepley #include <petscconvest.h>
79b94acceSBarry Smith 
8ace3abfcSBarry Smith PetscBool         SNESRegisterAllCalled = PETSC_FALSE;
90298fd71SBarry Smith PetscFunctionList SNESList              = NULL;
108ba1e511SMatthew Knepley 
118ba1e511SMatthew Knepley /* Logging support */
1222c6f798SBarry Smith PetscClassId  SNES_CLASSID, DMSNES_CLASSID;
13fc8bc0e3SRichard Tran Mills PetscLogEvent SNES_Solve, SNES_SetUp, SNES_FunctionEval, SNES_JacobianEval, SNES_NGSEval, SNES_NGSFuncEval, SNES_NPCSolve, SNES_ObjectiveEval;
14a09944afSBarry Smith 
15e113a28aSBarry Smith /*@
16dc4c0fb0SBarry Smith   SNESSetErrorIfNotConverged - Causes `SNESSolve()` to generate an error immediately if the solver has not converged.
17e113a28aSBarry Smith 
18c3339decSBarry Smith   Logically Collective
19e113a28aSBarry Smith 
20e113a28aSBarry Smith   Input Parameters:
21f6dfbefdSBarry Smith + snes - iterative context obtained from `SNESCreate()`
22f6dfbefdSBarry Smith - flg  - `PETSC_TRUE` indicates you want the error generated
23e113a28aSBarry Smith 
2420f4b53cSBarry Smith   Options Database Key:
2567b8a455SSatish Balay . -snes_error_if_not_converged <true,false> - cause an immediate error condition and stop the program if the solver does not converge
26e113a28aSBarry Smith 
27e113a28aSBarry Smith   Level: intermediate
28e113a28aSBarry Smith 
29f6dfbefdSBarry Smith   Note:
30f6dfbefdSBarry Smith   Normally PETSc continues if a solver fails to converge, you can call `SNESGetConvergedReason()` after a `SNESSolve()`
31f6dfbefdSBarry Smith   to determine if it has converged. Otherwise the solution may be inaccurate or wrong
32e113a28aSBarry Smith 
331cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetErrorIfNotConverged()`, `KSPGetErrorIfNotConverged()`, `KSPSetErrorIfNotConverged()`
34e113a28aSBarry Smith @*/
35d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetErrorIfNotConverged(SNES snes, PetscBool flg)
36d71ae5a4SJacob Faibussowitsch {
37e113a28aSBarry Smith   PetscFunctionBegin;
38e113a28aSBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
39acfcf0e5SJed Brown   PetscValidLogicalCollectiveBool(snes, flg, 2);
40e113a28aSBarry Smith   snes->errorifnotconverged = flg;
413ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
42e113a28aSBarry Smith }
43e113a28aSBarry Smith 
44e113a28aSBarry Smith /*@
45f6dfbefdSBarry Smith   SNESGetErrorIfNotConverged - Indicates if `SNESSolve()` will generate an error if the solver does not converge?
46e113a28aSBarry Smith 
47e113a28aSBarry Smith   Not Collective
48e113a28aSBarry Smith 
49e113a28aSBarry Smith   Input Parameter:
50f6dfbefdSBarry Smith . snes - iterative context obtained from `SNESCreate()`
51e113a28aSBarry Smith 
52e113a28aSBarry Smith   Output Parameter:
53f6dfbefdSBarry Smith . flag - `PETSC_TRUE` if it will generate an error, else `PETSC_FALSE`
54e113a28aSBarry Smith 
55e113a28aSBarry Smith   Level: intermediate
56e113a28aSBarry Smith 
571cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetErrorIfNotConverged()`, `KSPGetErrorIfNotConverged()`, `KSPSetErrorIfNotConverged()`
58e113a28aSBarry Smith @*/
59d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetErrorIfNotConverged(SNES snes, PetscBool *flag)
60d71ae5a4SJacob Faibussowitsch {
61e113a28aSBarry Smith   PetscFunctionBegin;
62e113a28aSBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
634f572ea9SToby Isaac   PetscAssertPointer(flag, 2);
64e113a28aSBarry Smith   *flag = snes->errorifnotconverged;
653ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
66e113a28aSBarry Smith }
67e113a28aSBarry Smith 
684fc747eaSLawrence Mitchell /*@
69dc4c0fb0SBarry Smith   SNESSetAlwaysComputesFinalResidual - tells the `SNES` to always compute the residual (nonlinear function value) at the final solution
704fc747eaSLawrence Mitchell 
71c3339decSBarry Smith   Logically Collective
724fc747eaSLawrence Mitchell 
734fc747eaSLawrence Mitchell   Input Parameters:
74f6dfbefdSBarry Smith + snes - the shell `SNES`
75f6dfbefdSBarry Smith - flg  - `PETSC_TRUE` to always compute the residual
764fc747eaSLawrence Mitchell 
774fc747eaSLawrence Mitchell   Level: advanced
784fc747eaSLawrence Mitchell 
79f6dfbefdSBarry Smith   Note:
80f6dfbefdSBarry Smith   Some solvers (such as smoothers in a `SNESFAS`) do not need the residual computed at the final solution so skip computing it
81f6dfbefdSBarry Smith   to save time.
82f6dfbefdSBarry Smith 
83420bcc1bSBarry Smith .seealso: [](ch_snes), `SNES`, `SNESFAS`, `SNESSolve()`, `SNESGetAlwaysComputesFinalResidual()`
844fc747eaSLawrence Mitchell @*/
85d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetAlwaysComputesFinalResidual(SNES snes, PetscBool flg)
86d71ae5a4SJacob Faibussowitsch {
874fc747eaSLawrence Mitchell   PetscFunctionBegin;
884fc747eaSLawrence Mitchell   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
894fc747eaSLawrence Mitchell   snes->alwayscomputesfinalresidual = flg;
903ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
914fc747eaSLawrence Mitchell }
924fc747eaSLawrence Mitchell 
934fc747eaSLawrence Mitchell /*@
94f6dfbefdSBarry Smith   SNESGetAlwaysComputesFinalResidual - checks if the `SNES` always computes the residual at the final solution
954fc747eaSLawrence Mitchell 
96c3339decSBarry Smith   Logically Collective
974fc747eaSLawrence Mitchell 
984fc747eaSLawrence Mitchell   Input Parameter:
99f6dfbefdSBarry Smith . snes - the `SNES` context
1004fc747eaSLawrence Mitchell 
1014fc747eaSLawrence Mitchell   Output Parameter:
102f6dfbefdSBarry Smith . flg - `PETSC_TRUE` if the residual is computed
1034fc747eaSLawrence Mitchell 
1044fc747eaSLawrence Mitchell   Level: advanced
1054fc747eaSLawrence Mitchell 
106420bcc1bSBarry Smith .seealso: [](ch_snes), `SNES`, `SNESFAS`, `SNESSolve()`, `SNESSetAlwaysComputesFinalResidual()`
1074fc747eaSLawrence Mitchell @*/
108d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetAlwaysComputesFinalResidual(SNES snes, PetscBool *flg)
109d71ae5a4SJacob Faibussowitsch {
1104fc747eaSLawrence Mitchell   PetscFunctionBegin;
1114fc747eaSLawrence Mitchell   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1124fc747eaSLawrence Mitchell   *flg = snes->alwayscomputesfinalresidual;
1133ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1144fc747eaSLawrence Mitchell }
1154fc747eaSLawrence Mitchell 
116e725d27bSBarry Smith /*@
117f6dfbefdSBarry Smith   SNESSetFunctionDomainError - tells `SNES` that the input vector, a proposed new solution, to your function you provided to `SNESSetFunction()` is not
118f0b84518SBarry Smith   in the functions domain. For example, a step with negative pressure.
1194936397dSBarry Smith 
120c3339decSBarry Smith   Logically Collective
1214936397dSBarry Smith 
1222fe279fdSBarry Smith   Input Parameter:
123f6dfbefdSBarry Smith . snes - the `SNES` context
1244936397dSBarry Smith 
12528529972SSatish Balay   Level: advanced
1264936397dSBarry Smith 
127ced0f3aeSBarry Smith   Notes:
128ced0f3aeSBarry Smith   If this is called the `SNESSolve()` stops iterating and returns with a `SNESConvergedReason` of `SNES_DIVERGED_FUNCTION_DOMAIN`
129ced0f3aeSBarry Smith 
130ced0f3aeSBarry Smith   You should always call `SNESGetConvergedReason()` after each `SNESSolve()` and verify if the iteration converged (positive result) or diverged (negative result).
131ced0f3aeSBarry Smith 
132f0b84518SBarry Smith   You can direct `SNES` to avoid certain steps by using `SNESVISetVariableBounds()`, `SNESVISetComputeVariableBounds()` or
133f0b84518SBarry Smith   `SNESLineSearchSetPreCheck()`, `SNESLineSearchSetPostCheck()`
134f0b84518SBarry Smith 
1351cc06b55SBarry Smith .seealso: [](ch_snes), `SNESCreate()`, `SNESSetFunction()`, `SNESFunction`, `SNESSetJacobianDomainError()`, `SNESVISetVariableBounds()`,
136ced0f3aeSBarry Smith           `SNESVISetComputeVariableBounds()`, `SNESLineSearchSetPreCheck()`, `SNESLineSearchSetPostCheck()`, `SNESConvergedReason`, `SNESGetConvergedReason()`
1374936397dSBarry Smith @*/
138d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetFunctionDomainError(SNES snes)
139d71ae5a4SJacob Faibussowitsch {
1404936397dSBarry Smith   PetscFunctionBegin;
1410700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1425f80ce2aSJacob Faibussowitsch   PetscCheck(!snes->errorifnotconverged, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "User code indicates input vector is not in the function domain");
1434936397dSBarry Smith   snes->domainerror = PETSC_TRUE;
1443ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1454936397dSBarry Smith }
1464936397dSBarry Smith 
1476a388c36SPeter Brune /*@
148f6dfbefdSBarry Smith   SNESSetJacobianDomainError - tells `SNES` that the function you provided to `SNESSetJacobian()` at the proposed step. For example there is a negative element transformation.
14907b62357SFande Kong 
150c3339decSBarry Smith   Logically Collective
15107b62357SFande Kong 
1522fe279fdSBarry Smith   Input Parameter:
153f6dfbefdSBarry Smith . snes - the `SNES` context
15407b62357SFande Kong 
15507b62357SFande Kong   Level: advanced
15607b62357SFande Kong 
157ced0f3aeSBarry Smith   Notes:
158ced0f3aeSBarry Smith   If this is called the `SNESSolve()` stops iterating and returns with a `SNESConvergedReason` of `SNES_DIVERGED_FUNCTION_DOMAIN`
159ced0f3aeSBarry Smith 
160ced0f3aeSBarry Smith   You should always call `SNESGetConvergedReason()` after each `SNESSolve()` and verify if the iteration converged (positive result) or diverged (negative result).
161ced0f3aeSBarry Smith 
162f0b84518SBarry Smith   You can direct `SNES` to avoid certain steps by using `SNESVISetVariableBounds()`, `SNESVISetComputeVariableBounds()` or
163f0b84518SBarry Smith   `SNESLineSearchSetPreCheck()`, `SNESLineSearchSetPostCheck()`
164f0b84518SBarry Smith 
1651cc06b55SBarry Smith .seealso: [](ch_snes), `SNESCreate()`, `SNESSetFunction()`, `SNESFunction()`, `SNESSetFunctionDomainError()`, `SNESVISetVariableBounds()`,
166ced0f3aeSBarry Smith           `SNESVISetComputeVariableBounds()`, `SNESLineSearchSetPreCheck()`, `SNESLineSearchSetPostCheck()`, `SNESConvergedReason`, `SNESGetConvergedReason()`
16707b62357SFande Kong @*/
168d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetJacobianDomainError(SNES snes)
169d71ae5a4SJacob Faibussowitsch {
17007b62357SFande Kong   PetscFunctionBegin;
17107b62357SFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1725f80ce2aSJacob Faibussowitsch   PetscCheck(!snes->errorifnotconverged, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "User code indicates computeJacobian does not make sense");
17307b62357SFande Kong   snes->jacobiandomainerror = PETSC_TRUE;
1743ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
17507b62357SFande Kong }
17607b62357SFande Kong 
17707b62357SFande Kong /*@
178f6dfbefdSBarry Smith   SNESSetCheckJacobianDomainError - tells `SNESSolve()` whether to check if the user called `SNESSetJacobianDomainError()` Jacobian domain error after
179420bcc1bSBarry Smith   each Jacobian evaluation. By default, it checks for the Jacobian domain error in the debug mode, and does not check it in the optimized mode.
180b351a90bSFande Kong 
181c3339decSBarry Smith   Logically Collective
182b351a90bSFande Kong 
183b351a90bSFande Kong   Input Parameters:
18420f4b53cSBarry Smith + snes - the `SNES` context
185f6dfbefdSBarry Smith - flg  - indicates if or not to check Jacobian domain error after each Jacobian evaluation
186b351a90bSFande Kong 
187b351a90bSFande Kong   Level: advanced
188b351a90bSFande Kong 
189f6dfbefdSBarry Smith   Note:
190f6dfbefdSBarry Smith   Checks require one extra parallel synchronization for each Jacobian evaluation
191f6dfbefdSBarry Smith 
1921cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESConvergedReason`, `SNESCreate()`, `SNESSetFunction()`, `SNESFunction()`, `SNESSetFunctionDomainError()`, `SNESGetCheckJacobianDomainError()`
193b351a90bSFande Kong @*/
194d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetCheckJacobianDomainError(SNES snes, PetscBool flg)
195d71ae5a4SJacob Faibussowitsch {
196b351a90bSFande Kong   PetscFunctionBegin;
197b351a90bSFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
198b351a90bSFande Kong   snes->checkjacdomainerror = flg;
1993ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
200b351a90bSFande Kong }
201b351a90bSFande Kong 
202b351a90bSFande Kong /*@
203420bcc1bSBarry Smith   SNESGetCheckJacobianDomainError - Get an indicator whether or not `SNES` is checking Jacobian domain errors after each Jacobian evaluation.
2048383d7d7SFande Kong 
205c3339decSBarry Smith   Logically Collective
2068383d7d7SFande Kong 
2072fe279fdSBarry Smith   Input Parameter:
208f6dfbefdSBarry Smith . snes - the `SNES` context
2098383d7d7SFande Kong 
2102fe279fdSBarry Smith   Output Parameter:
211420bcc1bSBarry Smith . flg - `PETSC_FALSE` indicates that it is not checking Jacobian domain errors after each Jacobian evaluation
2128383d7d7SFande Kong 
2138383d7d7SFande Kong   Level: advanced
2148383d7d7SFande Kong 
2151cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESCreate()`, `SNESSetFunction()`, `SNESFunction()`, `SNESSetFunctionDomainError()`, `SNESSetCheckJacobianDomainError()`
2168383d7d7SFande Kong @*/
217d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetCheckJacobianDomainError(SNES snes, PetscBool *flg)
218d71ae5a4SJacob Faibussowitsch {
2198383d7d7SFande Kong   PetscFunctionBegin;
2208383d7d7SFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2214f572ea9SToby Isaac   PetscAssertPointer(flg, 2);
2228383d7d7SFande Kong   *flg = snes->checkjacdomainerror;
2233ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2248383d7d7SFande Kong }
2258383d7d7SFande Kong 
2268383d7d7SFande Kong /*@
227420bcc1bSBarry Smith   SNESGetFunctionDomainError - Gets the status of the domain error after a call to `SNESComputeFunction()`
2286a388c36SPeter Brune 
229f6dfbefdSBarry Smith   Logically Collective
2306a388c36SPeter Brune 
2312fe279fdSBarry Smith   Input Parameter:
232f6dfbefdSBarry Smith . snes - the `SNES` context
2336a388c36SPeter Brune 
2342fe279fdSBarry Smith   Output Parameter:
235f6dfbefdSBarry Smith . domainerror - Set to `PETSC_TRUE` if there's a domain error; `PETSC_FALSE` otherwise.
2366a388c36SPeter Brune 
237f6dfbefdSBarry Smith   Level: developer
2386a388c36SPeter Brune 
2391cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetFunctionDomainError()`, `SNESComputeFunction()`
2406a388c36SPeter Brune @*/
241d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetFunctionDomainError(SNES snes, PetscBool *domainerror)
242d71ae5a4SJacob Faibussowitsch {
2436a388c36SPeter Brune   PetscFunctionBegin;
2446a388c36SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2454f572ea9SToby Isaac   PetscAssertPointer(domainerror, 2);
2466a388c36SPeter Brune   *domainerror = snes->domainerror;
2473ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2486a388c36SPeter Brune }
2496a388c36SPeter Brune 
25007b62357SFande Kong /*@
251420bcc1bSBarry Smith   SNESGetJacobianDomainError - Gets the status of the Jacobian domain error after a call to `SNESComputeJacobian()`
25207b62357SFande Kong 
253c3339decSBarry Smith   Logically Collective
25407b62357SFande Kong 
2552fe279fdSBarry Smith   Input Parameter:
256f6dfbefdSBarry Smith . snes - the `SNES` context
25707b62357SFande Kong 
2582fe279fdSBarry Smith   Output Parameter:
259f6dfbefdSBarry Smith . domainerror - Set to `PETSC_TRUE` if there's a Jacobian domain error; `PETSC_FALSE` otherwise.
26007b62357SFande Kong 
26107b62357SFande Kong   Level: advanced
26207b62357SFande Kong 
2631cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetFunctionDomainError()`, `SNESComputeFunction()`, `SNESGetFunctionDomainError()`
26407b62357SFande Kong @*/
265d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetJacobianDomainError(SNES snes, PetscBool *domainerror)
266d71ae5a4SJacob Faibussowitsch {
26707b62357SFande Kong   PetscFunctionBegin;
26807b62357SFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2694f572ea9SToby Isaac   PetscAssertPointer(domainerror, 2);
27007b62357SFande Kong   *domainerror = snes->jacobiandomainerror;
2713ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
27207b62357SFande Kong }
27307b62357SFande Kong 
27455849f57SBarry Smith /*@C
275f6dfbefdSBarry Smith   SNESLoad - Loads a `SNES` that has been stored in `PETSCVIEWERBINARY` with `SNESView()`.
27655849f57SBarry Smith 
277c3339decSBarry Smith   Collective
27855849f57SBarry Smith 
27955849f57SBarry Smith   Input Parameters:
280e4094ef1SJacob Faibussowitsch + snes   - the newly loaded `SNES`, this needs to have been created with `SNESCreate()` or
281f6dfbefdSBarry Smith            some related function before a call to `SNESLoad()`.
282f6dfbefdSBarry Smith - viewer - binary file viewer, obtained from `PetscViewerBinaryOpen()`
28355849f57SBarry Smith 
28455849f57SBarry Smith   Level: intermediate
28555849f57SBarry Smith 
286f6dfbefdSBarry Smith   Note:
287420bcc1bSBarry Smith   The `SNESType` is determined by the data in the file, any type set into the `SNES` before this call is ignored.
28855849f57SBarry Smith 
2891cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `PetscViewer`, `SNESCreate()`, `SNESType`, `PetscViewerBinaryOpen()`, `SNESView()`, `MatLoad()`, `VecLoad()`
29055849f57SBarry Smith @*/
291d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESLoad(SNES snes, PetscViewer viewer)
292d71ae5a4SJacob Faibussowitsch {
29355849f57SBarry Smith   PetscBool isbinary;
294060da220SMatthew G. Knepley   PetscInt  classid;
29555849f57SBarry Smith   char      type[256];
29655849f57SBarry Smith   KSP       ksp;
2972d53ad75SBarry Smith   DM        dm;
2982d53ad75SBarry Smith   DMSNES    dmsnes;
29955849f57SBarry Smith 
30055849f57SBarry Smith   PetscFunctionBegin;
3012d53ad75SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
30255849f57SBarry Smith   PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2);
3039566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary));
3045f80ce2aSJacob Faibussowitsch   PetscCheck(isbinary, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Invalid viewer; open viewer with PetscViewerBinaryOpen()");
30555849f57SBarry Smith 
3069566063dSJacob Faibussowitsch   PetscCall(PetscViewerBinaryRead(viewer, &classid, 1, NULL, PETSC_INT));
3075f80ce2aSJacob Faibussowitsch   PetscCheck(classid == SNES_FILE_CLASSID, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_WRONG, "Not SNES next in file");
3089566063dSJacob Faibussowitsch   PetscCall(PetscViewerBinaryRead(viewer, type, 256, NULL, PETSC_CHAR));
3099566063dSJacob Faibussowitsch   PetscCall(SNESSetType(snes, type));
310dbbe0bcdSBarry Smith   PetscTryTypeMethod(snes, load, viewer);
3119566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
3129566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &dmsnes));
3139566063dSJacob Faibussowitsch   PetscCall(DMSNESLoad(dmsnes, viewer));
3149566063dSJacob Faibussowitsch   PetscCall(SNESGetKSP(snes, &ksp));
3159566063dSJacob Faibussowitsch   PetscCall(KSPLoad(ksp, viewer));
3163ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
31755849f57SBarry Smith }
3186a388c36SPeter Brune 
3199804daf3SBarry Smith #include <petscdraw.h>
320e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS)
321e04113cfSBarry Smith   #include <petscviewersaws.h>
322bfb97211SBarry Smith #endif
3238404b7f3SBarry Smith 
324fe2efc57SMark /*@C
325dc4c0fb0SBarry Smith   SNESViewFromOptions - View a `SNES` based on values in the options database
326fe2efc57SMark 
327c3339decSBarry Smith   Collective
328fe2efc57SMark 
329fe2efc57SMark   Input Parameters:
330f6dfbefdSBarry Smith + A    - the `SNES` context
331dc4c0fb0SBarry Smith . obj  - Optional object that provides the options prefix for the checks
332736c3998SJose E. Roman - name - command line option
333fe2efc57SMark 
334fe2efc57SMark   Level: intermediate
335f6dfbefdSBarry Smith 
3361cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESView`, `PetscObjectViewFromOptions()`, `SNESCreate()`
337fe2efc57SMark @*/
338d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESViewFromOptions(SNES A, PetscObject obj, const char name[])
339d71ae5a4SJacob Faibussowitsch {
340fe2efc57SMark   PetscFunctionBegin;
341fe2efc57SMark   PetscValidHeaderSpecific(A, SNES_CLASSID, 1);
3429566063dSJacob Faibussowitsch   PetscCall(PetscObjectViewFromOptions((PetscObject)A, obj, name));
3433ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
344fe2efc57SMark }
345fe2efc57SMark 
346789d8953SBarry Smith PETSC_EXTERN PetscErrorCode SNESComputeJacobian_DMDA(SNES, Vec, Mat, Mat, void *);
347789d8953SBarry Smith 
3487e2c5f70SBarry Smith /*@C
349dc4c0fb0SBarry Smith   SNESView - Prints or visualizes the `SNES` data structure.
3509b94acceSBarry Smith 
351c3339decSBarry Smith   Collective
352fee21e36SBarry Smith 
353c7afd0dbSLois Curfman McInnes   Input Parameters:
354f6dfbefdSBarry Smith + snes   - the `SNES` context
355f6dfbefdSBarry Smith - viewer - the `PetscViewer`
356c7afd0dbSLois Curfman McInnes 
3579b94acceSBarry Smith   Options Database Key:
358f6dfbefdSBarry Smith . -snes_view - Calls `SNESView()` at end of `SNESSolve()`
3599b94acceSBarry Smith 
360dc4c0fb0SBarry Smith   Level: beginner
361dc4c0fb0SBarry Smith 
3629b94acceSBarry Smith   Notes:
3639b94acceSBarry Smith   The available visualization contexts include
364f6dfbefdSBarry Smith +     `PETSC_VIEWER_STDOUT_SELF` - standard output (default)
365f6dfbefdSBarry Smith -     `PETSC_VIEWER_STDOUT_WORLD` - synchronized standard
366c8a8ba5cSLois Curfman McInnes   output where only the first processor opens
367c8a8ba5cSLois Curfman McInnes   the file.  All other processors send their
368c8a8ba5cSLois Curfman McInnes   data to the first processor to print.
3699b94acceSBarry Smith 
370052bf0daSPierre Jolivet   The available formats include
371f6dfbefdSBarry Smith +     `PETSC_VIEWER_DEFAULT` - standard output (default)
372f6dfbefdSBarry Smith -     `PETSC_VIEWER_ASCII_INFO_DETAIL` - more verbose output for `SNESNASM`
373052bf0daSPierre Jolivet 
3743e081fefSLois Curfman McInnes   The user can open an alternative visualization context with
375f6dfbefdSBarry Smith   `PetscViewerASCIIOpen()` - output to a specified file.
3769b94acceSBarry Smith 
377f6dfbefdSBarry Smith   In the debugger you can do "call `SNESView`(snes,0)" to display the `SNES` solver. (The same holds for any PETSc object viewer).
378595c91d4SBarry Smith 
3791cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESLoad()`, `SNESCreate()`, `PetscViewerASCIIOpen()`
3809b94acceSBarry Smith @*/
381d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESView(SNES snes, PetscViewer viewer)
382d71ae5a4SJacob Faibussowitsch {
383fa9f3622SBarry Smith   SNESKSPEW     *kctx;
38494b7f48cSBarry Smith   KSP            ksp;
3857f1410a3SPeter Brune   SNESLineSearch linesearch;
38672a02f06SBarry Smith   PetscBool      iascii, isstring, isbinary, isdraw;
3872d53ad75SBarry Smith   DMSNES         dmsnes;
388e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS)
389536b137fSBarry Smith   PetscBool issaws;
390bfb97211SBarry Smith #endif
3919b94acceSBarry Smith 
3923a40ed3dSBarry Smith   PetscFunctionBegin;
3930700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
39448a46eb9SPierre Jolivet   if (!viewer) PetscCall(PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)snes), &viewer));
3950700a824SBarry Smith   PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2);
396c9780b6fSBarry Smith   PetscCheckSameComm(snes, 1, viewer, 2);
39774679c65SBarry Smith 
3989566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii));
3999566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSTRING, &isstring));
4009566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary));
4019566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw));
402e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS)
4039566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSAWS, &issaws));
404bfb97211SBarry Smith #endif
40532077d6dSBarry Smith   if (iascii) {
406dc0571f2SMatthew G. Knepley     SNESNormSchedule normschedule;
4078404b7f3SBarry Smith     DM               dm;
4088404b7f3SBarry Smith     PetscErrorCode (*cJ)(SNES, Vec, Mat, Mat, void *);
4098404b7f3SBarry Smith     void       *ctx;
410789d8953SBarry Smith     const char *pre = "";
411dc0571f2SMatthew G. Knepley 
4129566063dSJacob Faibussowitsch     PetscCall(PetscObjectPrintClassNamePrefixType((PetscObject)snes, viewer));
41348a46eb9SPierre Jolivet     if (!snes->setupcalled) PetscCall(PetscViewerASCIIPrintf(viewer, "  SNES has not been set up so information may be incomplete\n"));
414e7788613SBarry Smith     if (snes->ops->view) {
4159566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPushTab(viewer));
416dbbe0bcdSBarry Smith       PetscUseTypeMethod(snes, view, viewer);
4179566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPopTab(viewer));
4180ef38995SBarry Smith     }
41963a3b9bcSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "  maximum iterations=%" PetscInt_FMT ", maximum function evaluations=%" PetscInt_FMT "\n", snes->max_its, snes->max_funcs));
4209566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "  tolerances: relative=%g, absolute=%g, solution=%g\n", (double)snes->rtol, (double)snes->abstol, (double)snes->stol));
42148a46eb9SPierre Jolivet     if (snes->usesksp) PetscCall(PetscViewerASCIIPrintf(viewer, "  total number of linear solver iterations=%" PetscInt_FMT "\n", snes->linear_its));
42263a3b9bcSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "  total number of function evaluations=%" PetscInt_FMT "\n", snes->nfuncs));
4239566063dSJacob Faibussowitsch     PetscCall(SNESGetNormSchedule(snes, &normschedule));
4249566063dSJacob Faibussowitsch     if (normschedule > 0) PetscCall(PetscViewerASCIIPrintf(viewer, "  norm schedule %s\n", SNESNormSchedules[normschedule]));
42548a46eb9SPierre Jolivet     if (snes->gridsequence) PetscCall(PetscViewerASCIIPrintf(viewer, "  total number of grid sequence refinements=%" PetscInt_FMT "\n", snes->gridsequence));
4269b94acceSBarry Smith     if (snes->ksp_ewconv) {
427fa9f3622SBarry Smith       kctx = (SNESKSPEW *)snes->kspconvctx;
4289b94acceSBarry Smith       if (kctx) {
42963a3b9bcSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "  Eisenstat-Walker computation of KSP relative tolerance (version %" PetscInt_FMT ")\n", kctx->version));
4309566063dSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "    rtol_0=%g, rtol_max=%g, threshold=%g\n", (double)kctx->rtol_0, (double)kctx->rtol_max, (double)kctx->threshold));
4319566063dSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "    gamma=%g, alpha=%g, alpha2=%g\n", (double)kctx->gamma, (double)kctx->alpha, (double)kctx->alpha2));
4329b94acceSBarry Smith       }
4339b94acceSBarry Smith     }
434eb1f6c34SBarry Smith     if (snes->lagpreconditioner == -1) {
4359566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Preconditioned is never rebuilt\n"));
436eb1f6c34SBarry Smith     } else if (snes->lagpreconditioner > 1) {
43763a3b9bcSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Preconditioned is rebuilt every %" PetscInt_FMT " new Jacobians\n", snes->lagpreconditioner));
438eb1f6c34SBarry Smith     }
439eb1f6c34SBarry Smith     if (snes->lagjacobian == -1) {
4409566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Jacobian is never rebuilt\n"));
441eb1f6c34SBarry Smith     } else if (snes->lagjacobian > 1) {
44263a3b9bcSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Jacobian is rebuilt every %" PetscInt_FMT " SNES iterations\n", snes->lagjacobian));
443eb1f6c34SBarry Smith     }
4449566063dSJacob Faibussowitsch     PetscCall(SNESGetDM(snes, &dm));
4459566063dSJacob Faibussowitsch     PetscCall(DMSNESGetJacobian(dm, &cJ, &ctx));
446789d8953SBarry Smith     if (snes->mf_operator) {
4479566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Jacobian is applied matrix-free with differencing\n"));
448789d8953SBarry Smith       pre = "Preconditioning ";
449789d8953SBarry Smith     }
4508404b7f3SBarry Smith     if (cJ == SNESComputeJacobianDefault) {
4519566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  %sJacobian is built using finite differences one column at a time\n", pre));
4528404b7f3SBarry Smith     } else if (cJ == SNESComputeJacobianDefaultColor) {
4539566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  %sJacobian is built using finite differences with coloring\n", pre));
454789d8953SBarry Smith       /* it slightly breaks data encapsulation for access the DMDA information directly */
455789d8953SBarry Smith     } else if (cJ == SNESComputeJacobian_DMDA) {
456789d8953SBarry Smith       MatFDColoring fdcoloring;
4579566063dSJacob Faibussowitsch       PetscCall(PetscObjectQuery((PetscObject)dm, "DMDASNES_FDCOLORING", (PetscObject *)&fdcoloring));
458789d8953SBarry Smith       if (fdcoloring) {
4599566063dSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "  %sJacobian is built using colored finite differences on a DMDA\n", pre));
460789d8953SBarry Smith       } else {
4619566063dSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "  %sJacobian is built using a DMDA local Jacobian\n", pre));
462789d8953SBarry Smith       }
463996e1cbcSBarry Smith     } else if (snes->mf && !snes->mf_operator) {
4649566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Jacobian is applied matrix-free with differencing, no explicit Jacobian\n"));
4658404b7f3SBarry Smith     }
4660f5bd95cSBarry Smith   } else if (isstring) {
467317d6ea6SBarry Smith     const char *type;
4689566063dSJacob Faibussowitsch     PetscCall(SNESGetType(snes, &type));
4699566063dSJacob Faibussowitsch     PetscCall(PetscViewerStringSPrintf(viewer, " SNESType: %-7.7s", type));
470dbbe0bcdSBarry Smith     PetscTryTypeMethod(snes, view, viewer);
47155849f57SBarry Smith   } else if (isbinary) {
47255849f57SBarry Smith     PetscInt    classid = SNES_FILE_CLASSID;
47355849f57SBarry Smith     MPI_Comm    comm;
47455849f57SBarry Smith     PetscMPIInt rank;
47555849f57SBarry Smith     char        type[256];
47655849f57SBarry Smith 
4779566063dSJacob Faibussowitsch     PetscCall(PetscObjectGetComm((PetscObject)snes, &comm));
4789566063dSJacob Faibussowitsch     PetscCallMPI(MPI_Comm_rank(comm, &rank));
479dd400576SPatrick Sanan     if (rank == 0) {
4809566063dSJacob Faibussowitsch       PetscCall(PetscViewerBinaryWrite(viewer, &classid, 1, PETSC_INT));
4819566063dSJacob Faibussowitsch       PetscCall(PetscStrncpy(type, ((PetscObject)snes)->type_name, sizeof(type)));
4829566063dSJacob Faibussowitsch       PetscCall(PetscViewerBinaryWrite(viewer, type, sizeof(type), PETSC_CHAR));
48355849f57SBarry Smith     }
484dbbe0bcdSBarry Smith     PetscTryTypeMethod(snes, view, viewer);
48572a02f06SBarry Smith   } else if (isdraw) {
48672a02f06SBarry Smith     PetscDraw draw;
48772a02f06SBarry Smith     char      str[36];
48889fd9fafSBarry Smith     PetscReal x, y, bottom, h;
48972a02f06SBarry Smith 
4909566063dSJacob Faibussowitsch     PetscCall(PetscViewerDrawGetDraw(viewer, 0, &draw));
4919566063dSJacob Faibussowitsch     PetscCall(PetscDrawGetCurrentPoint(draw, &x, &y));
4929566063dSJacob Faibussowitsch     PetscCall(PetscStrncpy(str, "SNES: ", sizeof(str)));
4939566063dSJacob Faibussowitsch     PetscCall(PetscStrlcat(str, ((PetscObject)snes)->type_name, sizeof(str)));
4949566063dSJacob Faibussowitsch     PetscCall(PetscDrawStringBoxed(draw, x, y, PETSC_DRAW_BLUE, PETSC_DRAW_BLACK, str, NULL, &h));
49589fd9fafSBarry Smith     bottom = y - h;
4969566063dSJacob Faibussowitsch     PetscCall(PetscDrawPushCurrentPoint(draw, x, bottom));
497dbbe0bcdSBarry Smith     PetscTryTypeMethod(snes, view, viewer);
498e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS)
499536b137fSBarry Smith   } else if (issaws) {
500d45a07a7SBarry Smith     PetscMPIInt rank;
5012657e9d9SBarry Smith     const char *name;
502d45a07a7SBarry Smith 
5039566063dSJacob Faibussowitsch     PetscCall(PetscObjectGetName((PetscObject)snes, &name));
5049566063dSJacob Faibussowitsch     PetscCallMPI(MPI_Comm_rank(PETSC_COMM_WORLD, &rank));
505dd400576SPatrick Sanan     if (!((PetscObject)snes)->amsmem && rank == 0) {
506d45a07a7SBarry Smith       char dir[1024];
507d45a07a7SBarry Smith 
5089566063dSJacob Faibussowitsch       PetscCall(PetscObjectViewSAWs((PetscObject)snes, viewer));
5099566063dSJacob Faibussowitsch       PetscCall(PetscSNPrintf(dir, 1024, "/PETSc/Objects/%s/its", name));
510792fecdfSBarry Smith       PetscCallSAWs(SAWs_Register, (dir, &snes->iter, 1, SAWs_READ, SAWs_INT));
51148a46eb9SPierre Jolivet       if (!snes->conv_hist) PetscCall(SNESSetConvergenceHistory(snes, NULL, NULL, PETSC_DECIDE, PETSC_TRUE));
5129566063dSJacob Faibussowitsch       PetscCall(PetscSNPrintf(dir, 1024, "/PETSc/Objects/%s/conv_hist", name));
513792fecdfSBarry Smith       PetscCallSAWs(SAWs_Register, (dir, snes->conv_hist, 10, SAWs_READ, SAWs_DOUBLE));
514f05ece33SBarry Smith     }
515bfb97211SBarry Smith #endif
51672a02f06SBarry Smith   }
51772a02f06SBarry Smith   if (snes->linesearch) {
5189566063dSJacob Faibussowitsch     PetscCall(SNESGetLineSearch(snes, &linesearch));
5199566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPushTab(viewer));
5209566063dSJacob Faibussowitsch     PetscCall(SNESLineSearchView(linesearch, viewer));
5219566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPopTab(viewer));
52219bcc07fSBarry Smith   }
523efd4aadfSBarry Smith   if (snes->npc && snes->usesnpc) {
5249566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPushTab(viewer));
5259566063dSJacob Faibussowitsch     PetscCall(SNESView(snes->npc, viewer));
5269566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPopTab(viewer));
5274a0c5b0cSMatthew G Knepley   }
5289566063dSJacob Faibussowitsch   PetscCall(PetscViewerASCIIPushTab(viewer));
5299566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(snes->dm, &dmsnes));
5309566063dSJacob Faibussowitsch   PetscCall(DMSNESView(dmsnes, viewer));
5319566063dSJacob Faibussowitsch   PetscCall(PetscViewerASCIIPopTab(viewer));
5322c155ee1SBarry Smith   if (snes->usesksp) {
5339566063dSJacob Faibussowitsch     PetscCall(SNESGetKSP(snes, &ksp));
5349566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPushTab(viewer));
5359566063dSJacob Faibussowitsch     PetscCall(KSPView(ksp, viewer));
5369566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPopTab(viewer));
5372c155ee1SBarry Smith   }
53872a02f06SBarry Smith   if (isdraw) {
53972a02f06SBarry Smith     PetscDraw draw;
5409566063dSJacob Faibussowitsch     PetscCall(PetscViewerDrawGetDraw(viewer, 0, &draw));
5419566063dSJacob Faibussowitsch     PetscCall(PetscDrawPopCurrentPoint(draw));
5427f1410a3SPeter Brune   }
5433ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
5449b94acceSBarry Smith }
5459b94acceSBarry Smith 
54676b2cf59SMatthew Knepley /*
54776b2cf59SMatthew Knepley   We retain a list of functions that also take SNES command
54876b2cf59SMatthew Knepley   line options. These are called at the end SNESSetFromOptions()
54976b2cf59SMatthew Knepley */
55076b2cf59SMatthew Knepley #define MAXSETFROMOPTIONS 5
551a7cc72afSBarry Smith static PetscInt numberofsetfromoptions;
5526849ba73SBarry Smith static PetscErrorCode (*othersetfromoptions[MAXSETFROMOPTIONS])(SNES);
55376b2cf59SMatthew Knepley 
554ac226902SBarry Smith /*@C
555f6dfbefdSBarry Smith   SNESAddOptionsChecker - Adds an additional function to check for `SNES` options.
55676b2cf59SMatthew Knepley 
55776b2cf59SMatthew Knepley   Not Collective
55876b2cf59SMatthew Knepley 
55976b2cf59SMatthew Knepley   Input Parameter:
56076b2cf59SMatthew Knepley . snescheck - function that checks for options
56176b2cf59SMatthew Knepley 
562420bcc1bSBarry Smith   Calling sequence of `snescheck`:
563420bcc1bSBarry Smith . snes - the `SNES` object for which it is checking options
564420bcc1bSBarry Smith 
56576b2cf59SMatthew Knepley   Level: developer
56676b2cf59SMatthew Knepley 
5671cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetFromOptions()`
56876b2cf59SMatthew Knepley @*/
569420bcc1bSBarry Smith PetscErrorCode SNESAddOptionsChecker(PetscErrorCode (*snescheck)(SNES snes))
570d71ae5a4SJacob Faibussowitsch {
57176b2cf59SMatthew Knepley   PetscFunctionBegin;
57263a3b9bcSJacob Faibussowitsch   PetscCheck(numberofsetfromoptions < MAXSETFROMOPTIONS, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Too many options checkers, only %d allowed", MAXSETFROMOPTIONS);
57376b2cf59SMatthew Knepley   othersetfromoptions[numberofsetfromoptions++] = snescheck;
5743ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
57576b2cf59SMatthew Knepley }
57676b2cf59SMatthew Knepley 
577d71ae5a4SJacob Faibussowitsch static PetscErrorCode SNESSetUpMatrixFree_Private(SNES snes, PetscBool hasOperator, PetscInt version)
578d71ae5a4SJacob Faibussowitsch {
579aa3661deSLisandro Dalcin   Mat          J;
580895c21f2SBarry Smith   MatNullSpace nullsp;
581aa3661deSLisandro Dalcin 
582aa3661deSLisandro Dalcin   PetscFunctionBegin;
5830700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
584aa3661deSLisandro Dalcin 
58598613b67SLisandro Dalcin   if (!snes->vec_func && (snes->jacobian || snes->jacobian_pre)) {
58698613b67SLisandro Dalcin     Mat A = snes->jacobian, B = snes->jacobian_pre;
5879566063dSJacob Faibussowitsch     PetscCall(MatCreateVecs(A ? A : B, NULL, &snes->vec_func));
58898613b67SLisandro Dalcin   }
58998613b67SLisandro Dalcin 
5900fdf79fbSJacob Faibussowitsch   PetscCheck(version == 1 || version == 2, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "matrix-free operator routines, only version 1 and 2");
591aa3661deSLisandro Dalcin   if (version == 1) {
5929566063dSJacob Faibussowitsch     PetscCall(MatCreateSNESMF(snes, &J));
5939566063dSJacob Faibussowitsch     PetscCall(MatMFFDSetOptionsPrefix(J, ((PetscObject)snes)->prefix));
5949566063dSJacob Faibussowitsch     PetscCall(MatSetFromOptions(J));
5951e2ae407SBarry Smith     /* TODO: the version 2 code should be merged into the MatCreateSNESMF() and MatCreateMFFD() infrastructure and then removed */
5960fdf79fbSJacob Faibussowitsch   } else /* if (version == 2) */ {
5975f80ce2aSJacob Faibussowitsch     PetscCheck(snes->vec_func, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "SNESSetFunction() must be called first");
598570b7f6dSBarry Smith #if !defined(PETSC_USE_COMPLEX) && !defined(PETSC_USE_REAL_SINGLE) && !defined(PETSC_USE_REAL___FLOAT128) && !defined(PETSC_USE_REAL___FP16)
599f6dfbefdSBarry Smith     PetscCall(MatCreateSNESMFMore(snes, snes->vec_func, &J));
600aa3661deSLisandro Dalcin #else
6012479783cSJose E. Roman     SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "matrix-free operator routines (version 2)");
602aa3661deSLisandro Dalcin #endif
6030fdf79fbSJacob Faibussowitsch   }
604aa3661deSLisandro Dalcin 
60501c1178eSBarry Smith   /* attach any user provided null space that was on Amat to the newly created matrix-free matrix */
606895c21f2SBarry Smith   if (snes->jacobian) {
6079566063dSJacob Faibussowitsch     PetscCall(MatGetNullSpace(snes->jacobian, &nullsp));
6081baa6e33SBarry Smith     if (nullsp) PetscCall(MatSetNullSpace(J, nullsp));
609895c21f2SBarry Smith   }
610895c21f2SBarry Smith 
61163a3b9bcSJacob Faibussowitsch   PetscCall(PetscInfo(snes, "Setting default matrix-free operator routines (version %" PetscInt_FMT ")\n", version));
612d3462f78SMatthew Knepley   if (hasOperator) {
613aa3661deSLisandro Dalcin     /* This version replaces the user provided Jacobian matrix with a
614aa3661deSLisandro Dalcin        matrix-free version but still employs the user-provided preconditioner matrix. */
6159566063dSJacob Faibussowitsch     PetscCall(SNESSetJacobian(snes, J, NULL, NULL, NULL));
616aa3661deSLisandro Dalcin   } else {
617aa3661deSLisandro Dalcin     /* This version replaces both the user-provided Jacobian and the user-
61801c1178eSBarry Smith      provided preconditioner Jacobian with the default matrix-free version. */
619b552625fSStefano Zampini     if (snes->npcside == PC_LEFT && snes->npc) {
6209566063dSJacob Faibussowitsch       if (!snes->jacobian) PetscCall(SNESSetJacobian(snes, J, NULL, NULL, NULL));
621172a4300SPeter Brune     } else {
622789d8953SBarry Smith       KSP       ksp;
623789d8953SBarry Smith       PC        pc;
624789d8953SBarry Smith       PetscBool match;
625789d8953SBarry Smith 
6269566063dSJacob Faibussowitsch       PetscCall(SNESSetJacobian(snes, J, J, MatMFFDComputeJacobian, NULL));
627aa3661deSLisandro Dalcin       /* Force no preconditioner */
6289566063dSJacob Faibussowitsch       PetscCall(SNESGetKSP(snes, &ksp));
6299566063dSJacob Faibussowitsch       PetscCall(KSPGetPC(ksp, &pc));
6302698c518SLisandro Dalcin       PetscCall(PetscObjectTypeCompareAny((PetscObject)pc, &match, PCSHELL, PCH2OPUS, ""));
631aa3661deSLisandro Dalcin       if (!match) {
6329566063dSJacob Faibussowitsch         PetscCall(PetscInfo(snes, "Setting default matrix-free preconditioner routines\nThat is no preconditioner is being used\n"));
6339566063dSJacob Faibussowitsch         PetscCall(PCSetType(pc, PCNONE));
634aa3661deSLisandro Dalcin       }
635aa3661deSLisandro Dalcin     }
636789d8953SBarry Smith   }
6379566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&J));
6383ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
639aa3661deSLisandro Dalcin }
640aa3661deSLisandro Dalcin 
641d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMRestrictHook_SNESVecSol(DM dmfine, Mat Restrict, Vec Rscale, Mat Inject, DM dmcoarse, void *ctx)
642d71ae5a4SJacob Faibussowitsch {
643dfe15315SJed Brown   SNES snes = (SNES)ctx;
6440298fd71SBarry Smith   Vec  Xfine, Xfine_named = NULL, Xcoarse;
645dfe15315SJed Brown 
646dfe15315SJed Brown   PetscFunctionBegin;
64716ebb321SJed Brown   if (PetscLogPrintInfo) {
64816ebb321SJed Brown     PetscInt finelevel, coarselevel, fineclevel, coarseclevel;
6499566063dSJacob Faibussowitsch     PetscCall(DMGetRefineLevel(dmfine, &finelevel));
6509566063dSJacob Faibussowitsch     PetscCall(DMGetCoarsenLevel(dmfine, &fineclevel));
6519566063dSJacob Faibussowitsch     PetscCall(DMGetRefineLevel(dmcoarse, &coarselevel));
6529566063dSJacob Faibussowitsch     PetscCall(DMGetCoarsenLevel(dmcoarse, &coarseclevel));
65363a3b9bcSJacob Faibussowitsch     PetscCall(PetscInfo(dmfine, "Restricting SNES solution vector from level %" PetscInt_FMT "-%" PetscInt_FMT " to level %" PetscInt_FMT "-%" PetscInt_FMT "\n", finelevel, fineclevel, coarselevel, coarseclevel));
65416ebb321SJed Brown   }
655dfe15315SJed Brown   if (dmfine == snes->dm) Xfine = snes->vec_sol;
656dfe15315SJed Brown   else {
6579566063dSJacob Faibussowitsch     PetscCall(DMGetNamedGlobalVector(dmfine, "SNESVecSol", &Xfine_named));
658dfe15315SJed Brown     Xfine = Xfine_named;
659dfe15315SJed Brown   }
6609566063dSJacob Faibussowitsch   PetscCall(DMGetNamedGlobalVector(dmcoarse, "SNESVecSol", &Xcoarse));
661907f5c5aSLawrence Mitchell   if (Inject) {
6629566063dSJacob Faibussowitsch     PetscCall(MatRestrict(Inject, Xfine, Xcoarse));
663907f5c5aSLawrence Mitchell   } else {
6649566063dSJacob Faibussowitsch     PetscCall(MatRestrict(Restrict, Xfine, Xcoarse));
6659566063dSJacob Faibussowitsch     PetscCall(VecPointwiseMult(Xcoarse, Xcoarse, Rscale));
666907f5c5aSLawrence Mitchell   }
6679566063dSJacob Faibussowitsch   PetscCall(DMRestoreNamedGlobalVector(dmcoarse, "SNESVecSol", &Xcoarse));
6689566063dSJacob Faibussowitsch   if (Xfine_named) PetscCall(DMRestoreNamedGlobalVector(dmfine, "SNESVecSol", &Xfine_named));
6693ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
670dfe15315SJed Brown }
671dfe15315SJed Brown 
672d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMCoarsenHook_SNESVecSol(DM dm, DM dmc, void *ctx)
673d71ae5a4SJacob Faibussowitsch {
67416ebb321SJed Brown   PetscFunctionBegin;
6759566063dSJacob Faibussowitsch   PetscCall(DMCoarsenHookAdd(dmc, DMCoarsenHook_SNESVecSol, DMRestrictHook_SNESVecSol, ctx));
6763ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
67716ebb321SJed Brown }
67816ebb321SJed Brown 
679a6950cb2SJed Brown /* This may be called to rediscretize the operator on levels of linear multigrid. The DM shuffle is so the user can
680a6950cb2SJed Brown  * safely call SNESGetDM() in their residual evaluation routine. */
681d71ae5a4SJacob Faibussowitsch static PetscErrorCode KSPComputeOperators_SNES(KSP ksp, Mat A, Mat B, void *ctx)
682d71ae5a4SJacob Faibussowitsch {
683caa4e7f2SJed Brown   SNES  snes = (SNES)ctx;
6840298fd71SBarry Smith   Vec   X, Xnamed = NULL;
685dfe15315SJed Brown   DM    dmsave;
6864e269d77SPeter Brune   void *ctxsave;
68725ce1634SJed Brown   PetscErrorCode (*jac)(SNES, Vec, Mat, Mat, void *) = NULL;
688caa4e7f2SJed Brown 
689caa4e7f2SJed Brown   PetscFunctionBegin;
690dfe15315SJed Brown   dmsave = snes->dm;
6919566063dSJacob Faibussowitsch   PetscCall(KSPGetDM(ksp, &snes->dm));
692dfe15315SJed Brown   if (dmsave == snes->dm) X = snes->vec_sol; /* We are on the finest level */
6939371c9d4SSatish Balay   else { /* We are on a coarser level, this vec was initialized using a DM restrict hook */ PetscCall(DMGetNamedGlobalVector(snes->dm, "SNESVecSol", &Xnamed));
694dfe15315SJed Brown     X = Xnamed;
6959566063dSJacob Faibussowitsch     PetscCall(SNESGetJacobian(snes, NULL, NULL, &jac, &ctxsave));
6964e269d77SPeter Brune     /* If the DM's don't match up, the MatFDColoring context needed for the jacobian won't match up either -- fixit. */
69748a46eb9SPierre Jolivet     if (jac == SNESComputeJacobianDefaultColor) PetscCall(SNESSetJacobian(snes, NULL, NULL, SNESComputeJacobianDefaultColor, NULL));
6984e269d77SPeter Brune   }
6994dde8bb0SMatthew G. Knepley   /* Make sure KSP DM has the Jacobian computation routine */
7004dde8bb0SMatthew G. Knepley   {
7014dde8bb0SMatthew G. Knepley     DMSNES sdm;
7024e269d77SPeter Brune 
7039566063dSJacob Faibussowitsch     PetscCall(DMGetDMSNES(snes->dm, &sdm));
70448a46eb9SPierre Jolivet     if (!sdm->ops->computejacobian) PetscCall(DMCopyDMSNES(dmsave, snes->dm));
7054dde8bb0SMatthew G. Knepley   }
7062b93b426SMatthew G. Knepley   /* Compute the operators */
7079566063dSJacob Faibussowitsch   PetscCall(SNESComputeJacobian(snes, X, A, B));
7082b93b426SMatthew G. Knepley   /* Put the previous context back */
70948a46eb9SPierre Jolivet   if (snes->dm != dmsave && jac == SNESComputeJacobianDefaultColor) PetscCall(SNESSetJacobian(snes, NULL, NULL, jac, ctxsave));
7104e269d77SPeter Brune 
7119566063dSJacob Faibussowitsch   if (Xnamed) PetscCall(DMRestoreNamedGlobalVector(snes->dm, "SNESVecSol", &Xnamed));
712dfe15315SJed Brown   snes->dm = dmsave;
7133ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
714caa4e7f2SJed Brown }
715caa4e7f2SJed Brown 
7166cab3a1bSJed Brown /*@
717dc4c0fb0SBarry Smith   SNESSetUpMatrices - ensures that matrices are available for `SNES` Newton-like methods, this is called by `SNESSetUp_XXX()`
7186cab3a1bSJed Brown 
7196cab3a1bSJed Brown   Collective
7206cab3a1bSJed Brown 
7214165533cSJose E. Roman   Input Parameter:
72220f4b53cSBarry Smith . snes - `SNES` object to configure
7236cab3a1bSJed Brown 
7246cab3a1bSJed Brown   Level: developer
7256cab3a1bSJed Brown 
726dc4c0fb0SBarry Smith   Note:
727dc4c0fb0SBarry Smith   If the matrices do not yet exist it attempts to create them based on options previously set for the `SNES` such as `-snes_mf`
728dc4c0fb0SBarry Smith 
7291cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetUp()`
7306cab3a1bSJed Brown @*/
731d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetUpMatrices(SNES snes)
732d71ae5a4SJacob Faibussowitsch {
7336cab3a1bSJed Brown   DM     dm;
734942e3340SBarry Smith   DMSNES sdm;
7356cab3a1bSJed Brown 
7366cab3a1bSJed Brown   PetscFunctionBegin;
7379566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
7389566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &sdm));
73958b371f3SBarry Smith   if (!snes->jacobian && snes->mf) {
7406cab3a1bSJed Brown     Mat   J;
7416cab3a1bSJed Brown     void *functx;
7429566063dSJacob Faibussowitsch     PetscCall(MatCreateSNESMF(snes, &J));
7439566063dSJacob Faibussowitsch     PetscCall(MatMFFDSetOptionsPrefix(J, ((PetscObject)snes)->prefix));
7449566063dSJacob Faibussowitsch     PetscCall(MatSetFromOptions(J));
7459566063dSJacob Faibussowitsch     PetscCall(SNESGetFunction(snes, NULL, NULL, &functx));
7469566063dSJacob Faibussowitsch     PetscCall(SNESSetJacobian(snes, J, J, NULL, NULL));
7479566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&J));
748caa4e7f2SJed Brown   } else if (snes->mf_operator && !snes->jacobian_pre && !snes->jacobian) {
7496cab3a1bSJed Brown     Mat J, B;
7509566063dSJacob Faibussowitsch     PetscCall(MatCreateSNESMF(snes, &J));
7519566063dSJacob Faibussowitsch     PetscCall(MatMFFDSetOptionsPrefix(J, ((PetscObject)snes)->prefix));
7529566063dSJacob Faibussowitsch     PetscCall(MatSetFromOptions(J));
7539566063dSJacob Faibussowitsch     PetscCall(DMCreateMatrix(snes->dm, &B));
75406f20277SJed Brown     /* sdm->computejacobian was already set to reach here */
7559566063dSJacob Faibussowitsch     PetscCall(SNESSetJacobian(snes, J, B, NULL, NULL));
7569566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&J));
7579566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&B));
758caa4e7f2SJed Brown   } else if (!snes->jacobian_pre) {
7591ba9b98eSMatthew G. Knepley     PetscDS   prob;
7606cab3a1bSJed Brown     Mat       J, B;
7611ba9b98eSMatthew G. Knepley     PetscBool hasPrec = PETSC_FALSE;
7621ba9b98eSMatthew G. Knepley 
7636cab3a1bSJed Brown     J = snes->jacobian;
7649566063dSJacob Faibussowitsch     PetscCall(DMGetDS(dm, &prob));
7659566063dSJacob Faibussowitsch     if (prob) PetscCall(PetscDSHasJacobianPreconditioner(prob, &hasPrec));
7669566063dSJacob Faibussowitsch     if (J) PetscCall(PetscObjectReference((PetscObject)J));
7679566063dSJacob Faibussowitsch     else if (hasPrec) PetscCall(DMCreateMatrix(snes->dm, &J));
7689566063dSJacob Faibussowitsch     PetscCall(DMCreateMatrix(snes->dm, &B));
7699566063dSJacob Faibussowitsch     PetscCall(SNESSetJacobian(snes, J ? J : B, B, NULL, NULL));
7709566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&J));
7719566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&B));
7726cab3a1bSJed Brown   }
773caa4e7f2SJed Brown   {
774caa4e7f2SJed Brown     KSP ksp;
7759566063dSJacob Faibussowitsch     PetscCall(SNESGetKSP(snes, &ksp));
7769566063dSJacob Faibussowitsch     PetscCall(KSPSetComputeOperators(ksp, KSPComputeOperators_SNES, snes));
7779566063dSJacob Faibussowitsch     PetscCall(DMCoarsenHookAdd(snes->dm, DMCoarsenHook_SNESVecSol, DMRestrictHook_SNESVecSol, snes));
778caa4e7f2SJed Brown   }
7793ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
7806cab3a1bSJed Brown }
7816cab3a1bSJed Brown 
782d71ae5a4SJacob Faibussowitsch static PetscErrorCode SNESMonitorPauseFinal_Internal(SNES snes)
783d71ae5a4SJacob Faibussowitsch {
7845e7c47f3SMatthew G. Knepley   PetscInt i;
7855e7c47f3SMatthew G. Knepley 
7865e7c47f3SMatthew G. Knepley   PetscFunctionBegin;
7873ba16761SJacob Faibussowitsch   if (!snes->pauseFinal) PetscFunctionReturn(PETSC_SUCCESS);
7885e7c47f3SMatthew G. Knepley   for (i = 0; i < snes->numbermonitors; ++i) {
7895e7c47f3SMatthew G. Knepley     PetscViewerAndFormat *vf = (PetscViewerAndFormat *)snes->monitorcontext[i];
7905e7c47f3SMatthew G. Knepley     PetscDraw             draw;
7915e7c47f3SMatthew G. Knepley     PetscReal             lpause;
7925e7c47f3SMatthew G. Knepley 
7935e7c47f3SMatthew G. Knepley     if (!vf) continue;
7945e7c47f3SMatthew G. Knepley     if (vf->lg) {
7955e7c47f3SMatthew G. Knepley       if (!PetscCheckPointer(vf->lg, PETSC_OBJECT)) continue;
7965e7c47f3SMatthew G. Knepley       if (((PetscObject)vf->lg)->classid != PETSC_DRAWLG_CLASSID) continue;
7979566063dSJacob Faibussowitsch       PetscCall(PetscDrawLGGetDraw(vf->lg, &draw));
7989566063dSJacob Faibussowitsch       PetscCall(PetscDrawGetPause(draw, &lpause));
7999566063dSJacob Faibussowitsch       PetscCall(PetscDrawSetPause(draw, -1.0));
8009566063dSJacob Faibussowitsch       PetscCall(PetscDrawPause(draw));
8019566063dSJacob Faibussowitsch       PetscCall(PetscDrawSetPause(draw, lpause));
8025e7c47f3SMatthew G. Knepley     } else {
8035e7c47f3SMatthew G. Knepley       PetscBool isdraw;
8045e7c47f3SMatthew G. Knepley 
8055e7c47f3SMatthew G. Knepley       if (!PetscCheckPointer(vf->viewer, PETSC_OBJECT)) continue;
8065e7c47f3SMatthew G. Knepley       if (((PetscObject)vf->viewer)->classid != PETSC_VIEWER_CLASSID) continue;
8079566063dSJacob Faibussowitsch       PetscCall(PetscObjectTypeCompare((PetscObject)vf->viewer, PETSCVIEWERDRAW, &isdraw));
8085e7c47f3SMatthew G. Knepley       if (!isdraw) continue;
8099566063dSJacob Faibussowitsch       PetscCall(PetscViewerDrawGetDraw(vf->viewer, 0, &draw));
8109566063dSJacob Faibussowitsch       PetscCall(PetscDrawGetPause(draw, &lpause));
8119566063dSJacob Faibussowitsch       PetscCall(PetscDrawSetPause(draw, -1.0));
8129566063dSJacob Faibussowitsch       PetscCall(PetscDrawPause(draw));
8139566063dSJacob Faibussowitsch       PetscCall(PetscDrawSetPause(draw, lpause));
8145e7c47f3SMatthew G. Knepley     }
8155e7c47f3SMatthew G. Knepley   }
8163ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
8175e7c47f3SMatthew G. Knepley }
8185e7c47f3SMatthew G. Knepley 
819fde5950dSBarry Smith /*@C
820fde5950dSBarry Smith   SNESMonitorSetFromOptions - Sets a monitor function and viewer appropriate for the type indicated by the user
821fde5950dSBarry Smith 
822c3339decSBarry Smith   Collective
823fde5950dSBarry Smith 
824fde5950dSBarry Smith   Input Parameters:
825dc4c0fb0SBarry Smith + snes         - `SNES` object you wish to monitor
826fde5950dSBarry Smith . name         - the monitor type one is seeking
827fde5950dSBarry Smith . help         - message indicating what monitoring is done
828fde5950dSBarry Smith . manual       - manual page for the monitor
829fde5950dSBarry Smith . monitor      - the monitor function
830f6dfbefdSBarry Smith - monitorsetup - a function that is called once ONLY if the user selected this monitor that may set additional features of the `SNES` or `PetscViewer` objects
831fde5950dSBarry Smith 
832420bcc1bSBarry Smith   Calling sequence of `monitor`:
833420bcc1bSBarry Smith + snes - the nonlinear solver context
834420bcc1bSBarry Smith . it   - the current iteration
835420bcc1bSBarry Smith . r    - the current function norm
836420bcc1bSBarry Smith - vf   - a `PetscViewerAndFormat` struct that contains the `PetscViewer` and `PetscViewerFormat` to use
837420bcc1bSBarry Smith 
838420bcc1bSBarry Smith   Calling sequence of `monitorsetup`:
839420bcc1bSBarry Smith + snes - the nonlinear solver context
840420bcc1bSBarry Smith - vf   - a `PetscViewerAndFormat` struct that contains the `PetscViewer` and `PetscViewerFormat` to use
841420bcc1bSBarry Smith 
842f6dfbefdSBarry Smith   Options Database Key:
843f6dfbefdSBarry Smith . -name - trigger the use of this monitor in `SNESSetFromOptions()`
844f6dfbefdSBarry Smith 
845f6dfbefdSBarry Smith   Level: advanced
846fde5950dSBarry Smith 
8471cc06b55SBarry Smith .seealso: [](ch_snes), `PetscOptionsGetViewer()`, `PetscOptionsGetReal()`, `PetscOptionsHasName()`, `PetscOptionsGetString()`,
848db781477SPatrick Sanan           `PetscOptionsGetIntArray()`, `PetscOptionsGetRealArray()`, `PetscOptionsBool()`
849e4094ef1SJacob Faibussowitsch           `PetscOptionsInt()`, `PetscOptionsString()`, `PetscOptionsReal()`,
850db781477SPatrick Sanan           `PetscOptionsName()`, `PetscOptionsBegin()`, `PetscOptionsEnd()`, `PetscOptionsHeadBegin()`,
851c2e3fba1SPatrick Sanan           `PetscOptionsStringArray()`, `PetscOptionsRealArray()`, `PetscOptionsScalar()`,
852db781477SPatrick Sanan           `PetscOptionsBoolGroupBegin()`, `PetscOptionsBoolGroup()`, `PetscOptionsBoolGroupEnd()`,
853db781477SPatrick Sanan           `PetscOptionsFList()`, `PetscOptionsEList()`
854fde5950dSBarry Smith @*/
855420bcc1bSBarry Smith PetscErrorCode SNESMonitorSetFromOptions(SNES snes, const char name[], const char help[], const char manual[], PetscErrorCode (*monitor)(SNES snes, PetscInt it, PetscReal r, PetscViewerAndFormat *vf), PetscErrorCode (*monitorsetup)(SNES snes, PetscViewerAndFormat *vf))
856d71ae5a4SJacob Faibussowitsch {
857fde5950dSBarry Smith   PetscViewer       viewer;
858fde5950dSBarry Smith   PetscViewerFormat format;
859fde5950dSBarry Smith   PetscBool         flg;
860fde5950dSBarry Smith 
861fde5950dSBarry Smith   PetscFunctionBegin;
8629566063dSJacob Faibussowitsch   PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, name, &viewer, &format, &flg));
863fde5950dSBarry Smith   if (flg) {
864d43b4f6eSBarry Smith     PetscViewerAndFormat *vf;
8659566063dSJacob Faibussowitsch     PetscCall(PetscViewerAndFormatCreate(viewer, format, &vf));
8669566063dSJacob Faibussowitsch     PetscCall(PetscObjectDereference((PetscObject)viewer));
8671baa6e33SBarry Smith     if (monitorsetup) PetscCall((*monitorsetup)(snes, vf));
8689566063dSJacob Faibussowitsch     PetscCall(SNESMonitorSet(snes, (PetscErrorCode(*)(SNES, PetscInt, PetscReal, void *))monitor, vf, (PetscErrorCode(*)(void **))PetscViewerAndFormatDestroy));
869fde5950dSBarry Smith   }
8703ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
871fde5950dSBarry Smith }
872fde5950dSBarry Smith 
873a4598233SStefano Zampini PetscErrorCode SNESEWSetFromOptions_Private(SNESKSPEW *kctx, PetscBool print_api, MPI_Comm comm, const char *prefix)
874d71ae5a4SJacob Faibussowitsch {
875a4598233SStefano Zampini   const char *api = print_api ? "SNESKSPSetParametersEW" : NULL;
876a4598233SStefano Zampini 
8770f0abf79SStefano Zampini   PetscFunctionBegin;
8780f0abf79SStefano Zampini   PetscOptionsBegin(comm, prefix, "Eisenstat and Walker type forcing options", "KSP");
879a4598233SStefano Zampini   PetscCall(PetscOptionsInt("-ksp_ew_version", "Version 1, 2 or 3", api, kctx->version, &kctx->version, NULL));
880a4598233SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_rtol0", "0 <= rtol0 < 1", api, kctx->rtol_0, &kctx->rtol_0, NULL));
881a4598233SStefano Zampini   kctx->rtol_max = PetscMax(kctx->rtol_0, kctx->rtol_max);
882a4598233SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_rtolmax", "0 <= rtolmax < 1", api, kctx->rtol_max, &kctx->rtol_max, NULL));
883a4598233SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_gamma", "0 <= gamma <= 1", api, kctx->gamma, &kctx->gamma, NULL));
884a4598233SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_alpha", "1 < alpha <= 2", api, kctx->alpha, &kctx->alpha, NULL));
8850f0abf79SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_alpha2", "alpha2", NULL, kctx->alpha2, &kctx->alpha2, NULL));
886a4598233SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_threshold", "0 < threshold < 1", api, kctx->threshold, &kctx->threshold, NULL));
8870f0abf79SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_v4_p1", "p1", NULL, kctx->v4_p1, &kctx->v4_p1, NULL));
8880f0abf79SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_v4_p2", "p2", NULL, kctx->v4_p2, &kctx->v4_p2, NULL));
8890f0abf79SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_v4_p3", "p3", NULL, kctx->v4_p3, &kctx->v4_p3, NULL));
8900f0abf79SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_v4_m1", "Scaling when rk-1 in [p2,p3)", NULL, kctx->v4_m1, &kctx->v4_m1, NULL));
8910f0abf79SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_v4_m2", "Scaling when rk-1 in [p3,+infty)", NULL, kctx->v4_m2, &kctx->v4_m2, NULL));
8920f0abf79SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_v4_m3", "Threshold for successive rtol (0.1 in Eq.7)", NULL, kctx->v4_m3, &kctx->v4_m3, NULL));
8930f0abf79SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_v4_m4", "Adaptation scaling (0.5 in Eq.7)", NULL, kctx->v4_m4, &kctx->v4_m4, NULL));
8940f0abf79SStefano Zampini   PetscOptionsEnd();
8953ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
8960f0abf79SStefano Zampini }
8970f0abf79SStefano Zampini 
8989b94acceSBarry Smith /*@
899f6dfbefdSBarry Smith   SNESSetFromOptions - Sets various `SNES` and `KSP` parameters from user options.
9009b94acceSBarry Smith 
901c3339decSBarry Smith   Collective
902c7afd0dbSLois Curfman McInnes 
9039b94acceSBarry Smith   Input Parameter:
904f6dfbefdSBarry Smith . snes - the `SNES` context
9059b94acceSBarry Smith 
90636851e7fSLois Curfman McInnes   Options Database Keys:
907f6dfbefdSBarry Smith + -snes_type <type>                                                            - newtonls, newtontr, ngmres, ncg, nrichardson, qn, vi, fas, `SNESType` for complete list
908ceaaa498SBarry Smith . -snes_stol <stol>                                                            - convergence tolerance in terms of the norm of the change in the solution between steps
90970441072SBarry Smith . -snes_atol <abstol>                                                          - absolute tolerance of residual norm
910b39c3a46SLois Curfman McInnes . -snes_rtol <rtol>                                                            - relative decrease in tolerance norm from initial
911e4d06f11SPatrick Farrell . -snes_divergence_tolerance <divtol>                                          - if the residual goes above divtol*rnorm0, exit with divergence
912ceaaa498SBarry Smith . -snes_force_iteration <force>                                                - force `SNESSolve()` to take at least one iteration
913b39c3a46SLois Curfman McInnes . -snes_max_it <max_it>                                                        - maximum number of iterations
914b39c3a46SLois Curfman McInnes . -snes_max_funcs <max_funcs>                                                  - maximum number of function evaluations
9154839bfe8SBarry Smith . -snes_max_fail <max_fail>                                                    - maximum number of line search failures allowed before stopping, default is none
916ddf469c8SBarry Smith . -snes_max_linear_solve_fail                                                  - number of linear solver failures before SNESSolve() stops
917a8054027SBarry Smith . -snes_lag_preconditioner <lag>                                               - how often preconditioner is rebuilt (use -1 to never rebuild)
9183d5a8a6aSBarry Smith . -snes_lag_preconditioner_persists <true,false>                               - retains the -snes_lag_preconditioner information across multiple SNESSolve()
919e35cf81dSBarry Smith . -snes_lag_jacobian <lag>                                                     - how often Jacobian is rebuilt (use -1 to never rebuild)
9203d5a8a6aSBarry Smith . -snes_lag_jacobian_persists <true,false>                                     - retains the -snes_lag_jacobian information across multiple SNESSolve()
9214a221d59SStefano Zampini . -snes_tr_tol <trtol>                                                         - trust region tolerance
922ceaaa498SBarry Smith . -snes_convergence_test <default,skip,correct_pressure>                       - convergence test in nonlinear solver. default `SNESConvergedDefault()`. skip `SNESConvergedSkip()` means continue iterating until max_it or some other criterion is reached, saving expense of convergence test. correct_pressure `SNESConvergedCorrectPressure()` has special handling of a pressure null space.
923fde5950dSBarry Smith . -snes_monitor [ascii][:filename][:viewer format]                             - prints residual norm at each iteration. if no filename given prints to stdout
924fde5950dSBarry Smith . -snes_monitor_solution [ascii binary draw][:filename][:viewer format]        - plots solution at each iteration
925fde5950dSBarry Smith . -snes_monitor_residual [ascii binary draw][:filename][:viewer format]        - plots residual (not its norm) at each iteration
926fde5950dSBarry Smith . -snes_monitor_solution_update [ascii binary draw][:filename][:viewer format] - plots update to solution at each iteration
9274619e776SBarry Smith . -snes_monitor_lg_residualnorm                                                - plots residual norm at each iteration
928459f5d12SBarry Smith . -snes_monitor_lg_range                                                       - plots residual norm at each iteration
9295e7c47f3SMatthew G. Knepley . -snes_monitor_pause_final                                                    - Pauses all monitor drawing after the solver ends
930e24b481bSBarry Smith . -snes_fd                                                                     - use finite differences to compute Jacobian; very slow, only for testing
931e2e60de9SPeter Brune . -snes_fd_color                                                               - use finite differences with coloring to compute Jacobian
932ceaaa498SBarry Smith . -snes_mf_ksp_monitor                                                         - if using matrix-free multiply then print h at each `KSP` iteration
933b5badacbSBarry Smith . -snes_converged_reason                                                       - print the reason for convergence/divergence after each solve
934ceaaa498SBarry Smith . -npc_snes_type <type>                                                        - the `SNES` type to use as a nonlinear preconditioner
935e62ac41dSBarry Smith . -snes_test_jacobian <optional threshold>                                     - compare the user provided Jacobian with one computed via finite differences to check for errors.  If a threshold is given, display only those entries whose difference is greater than the threshold.
936e62ac41dSBarry Smith - -snes_test_jacobian_view                                                     - display the user provided Jacobian, the finite difference Jacobian and the difference between them to help users detect the location of errors in the user provided Jacobian.
93782738288SBarry Smith 
938f6dfbefdSBarry Smith   Options Database Keys for Eisenstat-Walker method:
939fa9f3622SBarry Smith + -snes_ksp_ew                       - use Eisenstat-Walker method for determining linear system convergence
9404b27c08aSLois Curfman McInnes . -snes_ksp_ew_version ver           - version of  Eisenstat-Walker method
94136851e7fSLois Curfman McInnes . -snes_ksp_ew_rtol0 <rtol0>         - Sets rtol0
94236851e7fSLois Curfman McInnes . -snes_ksp_ew_rtolmax <rtolmax>     - Sets rtolmax
94336851e7fSLois Curfman McInnes . -snes_ksp_ew_gamma <gamma>         - Sets gamma
94436851e7fSLois Curfman McInnes . -snes_ksp_ew_alpha <alpha>         - Sets alpha
94536851e7fSLois Curfman McInnes . -snes_ksp_ew_alpha2 <alpha2>       - Sets alpha2
94636851e7fSLois Curfman McInnes - -snes_ksp_ew_threshold <threshold> - Sets threshold
94782738288SBarry Smith 
948dc4c0fb0SBarry Smith   Level: beginner
949dc4c0fb0SBarry Smith 
95011ca99fdSLois Curfman McInnes   Notes:
951ec5066bdSBarry Smith   To see all options, run your program with the -help option or consult the users manual
952ec5066bdSBarry Smith 
953420bcc1bSBarry Smith   `SNES` supports three approaches for computing (approximate) Jacobians: user provided via `SNESSetJacobian()`, matrix-free using `MatCreateSNESMF()`,
954420bcc1bSBarry Smith   and computing explicitly with
955f6dfbefdSBarry Smith   finite differences and coloring using `MatFDColoring`. It is also possible to use automatic differentiation and the `MatFDColoring` object.
95683e2fdc7SBarry Smith 
957420bcc1bSBarry Smith .seealso: [](ch_snes), `SNESType`, `SNESSetOptionsPrefix()`, `SNESResetFromOptions()`, `SNES`, `SNESCreate()`, `MatCreateSNESMF()`, `MatFDColoring`
9589b94acceSBarry Smith @*/
959d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetFromOptions(SNES snes)
960d71ae5a4SJacob Faibussowitsch {
9618afaa268SBarry Smith   PetscBool   flg, pcset, persist, set;
962d8f46077SPeter Brune   PetscInt    i, indx, lag, grids;
96304d7464bSBarry Smith   const char *deft        = SNESNEWTONLS;
964649ef022SMatthew Knepley   const char *convtests[] = {"default", "skip", "correct_pressure"};
96585385478SLisandro Dalcin   SNESKSPEW  *kctx        = NULL;
9660f0abf79SStefano Zampini   char        type[256], monfilename[PETSC_MAX_PATH_LEN], ewprefix[256];
967c40d0f55SPeter Brune   PCSide      pcside;
968a64e098fSPeter Brune   const char *optionsprefix;
9699b94acceSBarry Smith 
9703a40ed3dSBarry Smith   PetscFunctionBegin;
9710700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
9729566063dSJacob Faibussowitsch   PetscCall(SNESRegisterAll());
973d0609cedSBarry Smith   PetscObjectOptionsBegin((PetscObject)snes);
974639ff905SBarry Smith   if (((PetscObject)snes)->type_name) deft = ((PetscObject)snes)->type_name;
9759566063dSJacob Faibussowitsch   PetscCall(PetscOptionsFList("-snes_type", "Nonlinear solver method", "SNESSetType", SNESList, deft, type, 256, &flg));
976d64ed03dSBarry Smith   if (flg) {
9779566063dSJacob Faibussowitsch     PetscCall(SNESSetType(snes, type));
9787adad957SLisandro Dalcin   } else if (!((PetscObject)snes)->type_name) {
9799566063dSJacob Faibussowitsch     PetscCall(SNESSetType(snes, deft));
980d64ed03dSBarry Smith   }
9819566063dSJacob Faibussowitsch   PetscCall(PetscOptionsReal("-snes_stol", "Stop if step length less than", "SNESSetTolerances", snes->stol, &snes->stol, NULL));
9829566063dSJacob Faibussowitsch   PetscCall(PetscOptionsReal("-snes_atol", "Stop if function norm less than", "SNESSetTolerances", snes->abstol, &snes->abstol, NULL));
983186905e3SBarry Smith 
9849566063dSJacob Faibussowitsch   PetscCall(PetscOptionsReal("-snes_rtol", "Stop if decrease in function norm less than", "SNESSetTolerances", snes->rtol, &snes->rtol, NULL));
9859566063dSJacob Faibussowitsch   PetscCall(PetscOptionsReal("-snes_divergence_tolerance", "Stop if residual norm increases by this factor", "SNESSetDivergenceTolerance", snes->divtol, &snes->divtol, NULL));
9869566063dSJacob Faibussowitsch   PetscCall(PetscOptionsInt("-snes_max_it", "Maximum iterations", "SNESSetTolerances", snes->max_its, &snes->max_its, NULL));
9879566063dSJacob Faibussowitsch   PetscCall(PetscOptionsInt("-snes_max_funcs", "Maximum function evaluations", "SNESSetTolerances", snes->max_funcs, &snes->max_funcs, NULL));
9889566063dSJacob Faibussowitsch   PetscCall(PetscOptionsInt("-snes_max_fail", "Maximum nonlinear step failures", "SNESSetMaxNonlinearStepFailures", snes->maxFailures, &snes->maxFailures, NULL));
9899566063dSJacob Faibussowitsch   PetscCall(PetscOptionsInt("-snes_max_linear_solve_fail", "Maximum failures in linear solves allowed", "SNESSetMaxLinearSolveFailures", snes->maxLinearSolveFailures, &snes->maxLinearSolveFailures, NULL));
9909566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_error_if_not_converged", "Generate error if solver does not converge", "SNESSetErrorIfNotConverged", snes->errorifnotconverged, &snes->errorifnotconverged, NULL));
9919566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_force_iteration", "Force SNESSolve() to take at least one iteration", "SNESSetForceIteration", snes->forceiteration, &snes->forceiteration, NULL));
9929566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_check_jacobian_domain_error", "Check Jacobian domain error after Jacobian evaluation", "SNESCheckJacobianDomainError", snes->checkjacdomainerror, &snes->checkjacdomainerror, NULL));
99385385478SLisandro Dalcin 
9949566063dSJacob Faibussowitsch   PetscCall(PetscOptionsInt("-snes_lag_preconditioner", "How often to rebuild preconditioner", "SNESSetLagPreconditioner", snes->lagpreconditioner, &lag, &flg));
995a8054027SBarry Smith   if (flg) {
9965f80ce2aSJacob Faibussowitsch     PetscCheck(lag != -1, PetscObjectComm((PetscObject)snes), PETSC_ERR_USER, "Cannot set the lag to -1 from the command line since the preconditioner must be built as least once, perhaps you mean -2");
9979566063dSJacob Faibussowitsch     PetscCall(SNESSetLagPreconditioner(snes, lag));
998a8054027SBarry Smith   }
9999566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_lag_preconditioner_persists", "Preconditioner lagging through multiple SNES solves", "SNESSetLagPreconditionerPersists", snes->lagjac_persist, &persist, &flg));
10001baa6e33SBarry Smith   if (flg) PetscCall(SNESSetLagPreconditionerPersists(snes, persist));
10019566063dSJacob Faibussowitsch   PetscCall(PetscOptionsInt("-snes_lag_jacobian", "How often to rebuild Jacobian", "SNESSetLagJacobian", snes->lagjacobian, &lag, &flg));
1002e35cf81dSBarry Smith   if (flg) {
10035f80ce2aSJacob Faibussowitsch     PetscCheck(lag != -1, PetscObjectComm((PetscObject)snes), PETSC_ERR_USER, "Cannot set the lag to -1 from the command line since the Jacobian must be built as least once, perhaps you mean -2");
10049566063dSJacob Faibussowitsch     PetscCall(SNESSetLagJacobian(snes, lag));
1005e35cf81dSBarry Smith   }
10069566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_lag_jacobian_persists", "Jacobian lagging through multiple SNES solves", "SNESSetLagJacobianPersists", snes->lagjac_persist, &persist, &flg));
10071baa6e33SBarry Smith   if (flg) PetscCall(SNESSetLagJacobianPersists(snes, persist));
100837ec4e1aSPeter Brune 
10099566063dSJacob Faibussowitsch   PetscCall(PetscOptionsInt("-snes_grid_sequence", "Use grid sequencing to generate initial guess", "SNESSetGridSequence", snes->gridsequence, &grids, &flg));
10101baa6e33SBarry Smith   if (flg) PetscCall(SNESSetGridSequence(snes, grids));
1011a8054027SBarry Smith 
1012400f6f02SBarry Smith   PetscCall(PetscOptionsEList("-snes_convergence_test", "Convergence test", "SNESSetConvergenceTest", convtests, PETSC_STATIC_ARRAY_LENGTH(convtests), "default", &indx, &flg));
101385385478SLisandro Dalcin   if (flg) {
101485385478SLisandro Dalcin     switch (indx) {
1015d71ae5a4SJacob Faibussowitsch     case 0:
1016d71ae5a4SJacob Faibussowitsch       PetscCall(SNESSetConvergenceTest(snes, SNESConvergedDefault, NULL, NULL));
1017d71ae5a4SJacob Faibussowitsch       break;
1018d71ae5a4SJacob Faibussowitsch     case 1:
1019d71ae5a4SJacob Faibussowitsch       PetscCall(SNESSetConvergenceTest(snes, SNESConvergedSkip, NULL, NULL));
1020d71ae5a4SJacob Faibussowitsch       break;
1021d71ae5a4SJacob Faibussowitsch     case 2:
1022d71ae5a4SJacob Faibussowitsch       PetscCall(SNESSetConvergenceTest(snes, SNESConvergedCorrectPressure, NULL, NULL));
1023d71ae5a4SJacob Faibussowitsch       break;
102485385478SLisandro Dalcin     }
102585385478SLisandro Dalcin   }
102685385478SLisandro Dalcin 
10279566063dSJacob Faibussowitsch   PetscCall(PetscOptionsEList("-snes_norm_schedule", "SNES Norm schedule", "SNESSetNormSchedule", SNESNormSchedules, 5, "function", &indx, &flg));
10289566063dSJacob Faibussowitsch   if (flg) PetscCall(SNESSetNormSchedule(snes, (SNESNormSchedule)indx));
1029fdacfa88SPeter Brune 
10309566063dSJacob Faibussowitsch   PetscCall(PetscOptionsEList("-snes_function_type", "SNES Norm schedule", "SNESSetFunctionType", SNESFunctionTypes, 2, "unpreconditioned", &indx, &flg));
10319566063dSJacob Faibussowitsch   if (flg) PetscCall(SNESSetFunctionType(snes, (SNESFunctionType)indx));
1032186905e3SBarry Smith 
103385385478SLisandro Dalcin   kctx = (SNESKSPEW *)snes->kspconvctx;
103485385478SLisandro Dalcin 
10359566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_ksp_ew", "Use Eisentat-Walker linear system convergence test", "SNESKSPSetUseEW", snes->ksp_ewconv, &snes->ksp_ewconv, NULL));
1036186905e3SBarry Smith 
10370f0abf79SStefano Zampini   PetscCall(SNESGetOptionsPrefix(snes, &optionsprefix));
10380f0abf79SStefano Zampini   PetscCall(PetscSNPrintf(ewprefix, sizeof(ewprefix), "%s%s", optionsprefix ? optionsprefix : "", "snes_"));
1039a4598233SStefano Zampini   PetscCall(SNESEWSetFromOptions_Private(kctx, PETSC_TRUE, PetscObjectComm((PetscObject)snes), ewprefix));
1040186905e3SBarry Smith 
104190d69ab7SBarry Smith   flg = PETSC_FALSE;
10429566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_monitor_cancel", "Remove all monitors", "SNESMonitorCancel", flg, &flg, &set));
10439566063dSJacob Faibussowitsch   if (set && flg) PetscCall(SNESMonitorCancel(snes));
1044eabae89aSBarry Smith 
10459566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor", "Monitor norm of function", "SNESMonitorDefault", SNESMonitorDefault, SNESMonitorDefaultSetUp));
10469566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_short", "Monitor norm of function with fewer digits", "SNESMonitorDefaultShort", SNESMonitorDefaultShort, NULL));
10479566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_range", "Monitor range of elements of function", "SNESMonitorRange", SNESMonitorRange, NULL));
1048eabae89aSBarry Smith 
10499566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_ratio", "Monitor ratios of the norm of function for consecutive steps", "SNESMonitorRatio", SNESMonitorRatio, SNESMonitorRatioSetUp));
10509566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_field", "Monitor norm of function (split into fields)", "SNESMonitorDefaultField", SNESMonitorDefaultField, NULL));
10519566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_solution", "View solution at each iteration", "SNESMonitorSolution", SNESMonitorSolution, NULL));
10529566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_solution_update", "View correction at each iteration", "SNESMonitorSolutionUpdate", SNESMonitorSolutionUpdate, NULL));
10539566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_residual", "View residual at each iteration", "SNESMonitorResidual", SNESMonitorResidual, NULL));
10549566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_jacupdate_spectrum", "Print the change in the spectrum of the Jacobian", "SNESMonitorJacUpdateSpectrum", SNESMonitorJacUpdateSpectrum, NULL));
10559566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_fields", "Monitor norm of function per field", "SNESMonitorSet", SNESMonitorFields, NULL));
10569566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_monitor_pause_final", "Pauses all draw monitors at the final iterate", "SNESMonitorPauseFinal_Internal", PETSC_FALSE, &snes->pauseFinal, NULL));
10572db13446SMatthew G. Knepley 
10589566063dSJacob Faibussowitsch   PetscCall(PetscOptionsString("-snes_monitor_python", "Use Python function", "SNESMonitorSet", NULL, monfilename, sizeof(monfilename), &flg));
10599566063dSJacob Faibussowitsch   if (flg) PetscCall(PetscPythonMonitorSet((PetscObject)snes, monfilename));
10605180491cSLisandro Dalcin 
106190d69ab7SBarry Smith   flg = PETSC_FALSE;
10629566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_monitor_lg_range", "Plot function range at each iteration", "SNESMonitorLGRange", flg, &flg, NULL));
1063459f5d12SBarry Smith   if (flg) {
1064459f5d12SBarry Smith     PetscViewer ctx;
1065e24b481bSBarry Smith 
10669566063dSJacob Faibussowitsch     PetscCall(PetscViewerDrawOpen(PetscObjectComm((PetscObject)snes), NULL, NULL, PETSC_DECIDE, PETSC_DECIDE, 400, 300, &ctx));
10679566063dSJacob Faibussowitsch     PetscCall(SNESMonitorSet(snes, SNESMonitorLGRange, ctx, (PetscErrorCode(*)(void **))PetscViewerDestroy));
1068459f5d12SBarry Smith   }
10692e7541e6SPeter Brune 
107090d69ab7SBarry Smith   flg = PETSC_FALSE;
10719566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_converged_reason_view_cancel", "Remove all converged reason viewers", "SNESConvergedReasonViewCancel", flg, &flg, &set));
10729566063dSJacob Faibussowitsch   if (set && flg) PetscCall(SNESConvergedReasonViewCancel(snes));
1073c4421ceaSFande Kong 
1074c4421ceaSFande Kong   flg = PETSC_FALSE;
10759566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_fd", "Use finite differences (slow) to compute Jacobian", "SNESComputeJacobianDefault", flg, &flg, NULL));
10764b27c08aSLois Curfman McInnes   if (flg) {
10776cab3a1bSJed Brown     void *functx;
1078b1f624c7SBarry Smith     DM    dm;
10799566063dSJacob Faibussowitsch     PetscCall(SNESGetDM(snes, &dm));
1080800f99ffSJeremy L Thompson     PetscCall(DMSNESUnsetJacobianContext_Internal(dm));
10819566063dSJacob Faibussowitsch     PetscCall(SNESGetFunction(snes, NULL, NULL, &functx));
10829566063dSJacob Faibussowitsch     PetscCall(SNESSetJacobian(snes, snes->jacobian, snes->jacobian_pre, SNESComputeJacobianDefault, functx));
10839566063dSJacob Faibussowitsch     PetscCall(PetscInfo(snes, "Setting default finite difference Jacobian matrix\n"));
10849b94acceSBarry Smith   }
1085639f9d9dSBarry Smith 
108644848bc4SPeter Brune   flg = PETSC_FALSE;
10879566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_fd_function", "Use finite differences (slow) to compute function from user objective", "SNESObjectiveComputeFunctionDefaultFD", flg, &flg, NULL));
10881baa6e33SBarry Smith   if (flg) PetscCall(SNESSetFunction(snes, NULL, SNESObjectiveComputeFunctionDefaultFD, NULL));
108997584545SPeter Brune 
109097584545SPeter Brune   flg = PETSC_FALSE;
10919566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_fd_color", "Use finite differences with coloring to compute Jacobian", "SNESComputeJacobianDefaultColor", flg, &flg, NULL));
109244848bc4SPeter Brune   if (flg) {
1093c52e227fSPeter Brune     DM dm;
10949566063dSJacob Faibussowitsch     PetscCall(SNESGetDM(snes, &dm));
1095800f99ffSJeremy L Thompson     PetscCall(DMSNESUnsetJacobianContext_Internal(dm));
10969566063dSJacob Faibussowitsch     PetscCall(SNESSetJacobian(snes, snes->jacobian, snes->jacobian_pre, SNESComputeJacobianDefaultColor, NULL));
10979566063dSJacob Faibussowitsch     PetscCall(PetscInfo(snes, "Setting default finite difference coloring Jacobian matrix\n"));
109844848bc4SPeter Brune   }
109944848bc4SPeter Brune 
1100aa3661deSLisandro Dalcin   flg = PETSC_FALSE;
11019566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_mf_operator", "Use a Matrix-Free Jacobian with user-provided preconditioner matrix", "SNESSetUseMatrixFree", PETSC_FALSE, &snes->mf_operator, &flg));
1102d8f46077SPeter Brune   if (flg && snes->mf_operator) {
1103a8248277SBarry Smith     snes->mf_operator = PETSC_TRUE;
1104d8f46077SPeter Brune     snes->mf          = PETSC_TRUE;
1105a8248277SBarry Smith   }
1106aa3661deSLisandro Dalcin   flg = PETSC_FALSE;
11079566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_mf", "Use a Matrix-Free Jacobian with no preconditioner matrix", "SNESSetUseMatrixFree", PETSC_FALSE, &snes->mf, &flg));
1108d8f46077SPeter Brune   if (!flg && snes->mf_operator) snes->mf = PETSC_TRUE;
11099566063dSJacob Faibussowitsch   PetscCall(PetscOptionsInt("-snes_mf_version", "Matrix-Free routines version 1 or 2", "None", snes->mf_version, &snes->mf_version, NULL));
1110d28543b3SPeter Brune 
1111c40d0f55SPeter Brune   flg = PETSC_FALSE;
11129566063dSJacob Faibussowitsch   PetscCall(SNESGetNPCSide(snes, &pcside));
11139566063dSJacob Faibussowitsch   PetscCall(PetscOptionsEnum("-snes_npc_side", "SNES nonlinear preconditioner side", "SNESSetNPCSide", PCSides, (PetscEnum)pcside, (PetscEnum *)&pcside, &flg));
11149566063dSJacob Faibussowitsch   if (flg) PetscCall(SNESSetNPCSide(snes, pcside));
1115c40d0f55SPeter Brune 
1116e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS)
11178a70d858SHong Zhang   /*
11188a70d858SHong Zhang     Publish convergence information using SAWs
11198a70d858SHong Zhang   */
11208a70d858SHong Zhang   flg = PETSC_FALSE;
11219566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_monitor_saws", "Publish SNES progress using SAWs", "SNESMonitorSet", flg, &flg, NULL));
11228a70d858SHong Zhang   if (flg) {
11238a70d858SHong Zhang     void *ctx;
11249566063dSJacob Faibussowitsch     PetscCall(SNESMonitorSAWsCreate(snes, &ctx));
11259566063dSJacob Faibussowitsch     PetscCall(SNESMonitorSet(snes, SNESMonitorSAWs, ctx, SNESMonitorSAWsDestroy));
11268a70d858SHong Zhang   }
11278a70d858SHong Zhang #endif
11288a70d858SHong Zhang #if defined(PETSC_HAVE_SAWS)
1129b90c6cbeSBarry Smith   {
1130b90c6cbeSBarry Smith     PetscBool set;
1131b90c6cbeSBarry Smith     flg = PETSC_FALSE;
11329566063dSJacob Faibussowitsch     PetscCall(PetscOptionsBool("-snes_saws_block", "Block for SAWs at end of SNESSolve", "PetscObjectSAWsBlock", ((PetscObject)snes)->amspublishblock, &flg, &set));
11331baa6e33SBarry Smith     if (set) PetscCall(PetscObjectSAWsSetBlock((PetscObject)snes, flg));
1134b90c6cbeSBarry Smith   }
1135b90c6cbeSBarry Smith #endif
1136b90c6cbeSBarry Smith 
113748a46eb9SPierre Jolivet   for (i = 0; i < numberofsetfromoptions; i++) PetscCall((*othersetfromoptions[i])(snes));
113876b2cf59SMatthew Knepley 
1139dbbe0bcdSBarry Smith   PetscTryTypeMethod(snes, setfromoptions, PetscOptionsObject);
11405d973c19SBarry Smith 
11415d973c19SBarry Smith   /* process any options handlers added with PetscObjectAddOptionsHandler() */
1142dbbe0bcdSBarry Smith   PetscCall(PetscObjectProcessOptionsHandlers((PetscObject)snes, PetscOptionsObject));
1143d0609cedSBarry Smith   PetscOptionsEnd();
11444bbc92c1SBarry Smith 
1145d8d34be6SBarry Smith   if (snes->linesearch) {
11469566063dSJacob Faibussowitsch     PetscCall(SNESGetLineSearch(snes, &snes->linesearch));
11479566063dSJacob Faibussowitsch     PetscCall(SNESLineSearchSetFromOptions(snes->linesearch));
1148d8d34be6SBarry Smith   }
11499e764e56SPeter Brune 
11506aa5e7e9SBarry Smith   if (snes->usesksp) {
11519566063dSJacob Faibussowitsch     if (!snes->ksp) PetscCall(SNESGetKSP(snes, &snes->ksp));
11529566063dSJacob Faibussowitsch     PetscCall(KSPSetOperators(snes->ksp, snes->jacobian, snes->jacobian_pre));
11539566063dSJacob Faibussowitsch     PetscCall(KSPSetFromOptions(snes->ksp));
11546aa5e7e9SBarry Smith   }
11556991f827SBarry Smith 
1156b5badacbSBarry Smith   /* if user has set the SNES NPC type via options database, create it. */
11579566063dSJacob Faibussowitsch   PetscCall(SNESGetOptionsPrefix(snes, &optionsprefix));
11589566063dSJacob Faibussowitsch   PetscCall(PetscOptionsHasName(((PetscObject)snes)->options, optionsprefix, "-npc_snes_type", &pcset));
115948a46eb9SPierre Jolivet   if (pcset && (!snes->npc)) PetscCall(SNESGetNPC(snes, &snes->npc));
11601baa6e33SBarry Smith   if (snes->npc) PetscCall(SNESSetFromOptions(snes->npc));
1161b3cd9a81SMatthew G. Knepley   snes->setfromoptionscalled++;
11623ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1163b3cd9a81SMatthew G. Knepley }
1164b3cd9a81SMatthew G. Knepley 
1165b3cd9a81SMatthew G. Knepley /*@
1166420bcc1bSBarry Smith   SNESResetFromOptions - Sets various `SNES` and `KSP` parameters from user options ONLY if the `SNESSetFromOptions()` was previously called
1167b3cd9a81SMatthew G. Knepley 
1168c3339decSBarry Smith   Collective
1169b3cd9a81SMatthew G. Knepley 
1170b3cd9a81SMatthew G. Knepley   Input Parameter:
1171f6dfbefdSBarry Smith . snes - the `SNES` context
1172b3cd9a81SMatthew G. Knepley 
1173420bcc1bSBarry Smith   Level: advanced
1174b3cd9a81SMatthew G. Knepley 
11751cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetFromOptions()`, `SNESSetOptionsPrefix()`
1176b3cd9a81SMatthew G. Knepley @*/
1177d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESResetFromOptions(SNES snes)
1178d71ae5a4SJacob Faibussowitsch {
1179b3cd9a81SMatthew G. Knepley   PetscFunctionBegin;
11809566063dSJacob Faibussowitsch   if (snes->setfromoptionscalled) PetscCall(SNESSetFromOptions(snes));
11813ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
11829b94acceSBarry Smith }
11839b94acceSBarry Smith 
1184bb9467b5SJed Brown /*@C
1185d25893d9SBarry Smith   SNESSetComputeApplicationContext - Sets an optional function to compute a user-defined context for
1186d25893d9SBarry Smith   the nonlinear solvers.
1187d25893d9SBarry Smith 
1188dc4c0fb0SBarry Smith   Logically Collective; No Fortran Support
1189d25893d9SBarry Smith 
1190d25893d9SBarry Smith   Input Parameters:
1191f6dfbefdSBarry Smith + snes    - the `SNES` context
1192d25893d9SBarry Smith . compute - function to compute the context
1193d25893d9SBarry Smith - destroy - function to destroy the context
1194d25893d9SBarry Smith 
1195420bcc1bSBarry Smith   Calling sequence of `compute`:
1196420bcc1bSBarry Smith + snes - the `SNES` context
1197420bcc1bSBarry Smith - ctx  - context to be computed
1198420bcc1bSBarry Smith 
1199420bcc1bSBarry Smith   Calling sequence of `destroy`:
1200420bcc1bSBarry Smith . ctx - context to be computed by `compute()`
1201420bcc1bSBarry Smith 
1202d25893d9SBarry Smith   Level: intermediate
1203d25893d9SBarry Smith 
1204f6dfbefdSBarry Smith   Note:
1205f6dfbefdSBarry Smith   This routine is useful if you are performing grid sequencing or using `SNESFAS` and need the appropriate context generated for each level.
1206f6dfbefdSBarry Smith 
1207f6dfbefdSBarry Smith   Use `SNESSetApplicationContext()` to see the context immediately
1208f6dfbefdSBarry Smith 
120942747ad1SJacob Faibussowitsch .seealso: [](ch_snes), `SNESGetApplicationContext()`, `SNESSetApplicationContext()`
1210d25893d9SBarry Smith @*/
1211420bcc1bSBarry Smith PetscErrorCode SNESSetComputeApplicationContext(SNES snes, PetscErrorCode (*compute)(SNES snes, void **ctx), PetscErrorCode (*destroy)(void **ctx))
1212d71ae5a4SJacob Faibussowitsch {
1213d25893d9SBarry Smith   PetscFunctionBegin;
1214d25893d9SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1215d25893d9SBarry Smith   snes->ops->usercompute = compute;
1216d25893d9SBarry Smith   snes->ops->userdestroy = destroy;
12173ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1218d25893d9SBarry Smith }
1219a847f771SSatish Balay 
1220b07ff414SBarry Smith /*@
1221f6dfbefdSBarry Smith   SNESSetApplicationContext - Sets the optional user-defined context for the nonlinear solvers.
12229b94acceSBarry Smith 
1223c3339decSBarry Smith   Logically Collective
1224fee21e36SBarry Smith 
1225c7afd0dbSLois Curfman McInnes   Input Parameters:
1226f6dfbefdSBarry Smith + snes - the `SNES` context
1227c7afd0dbSLois Curfman McInnes - usrP - optional user context
1228c7afd0dbSLois Curfman McInnes 
122936851e7fSLois Curfman McInnes   Level: intermediate
123036851e7fSLois Curfman McInnes 
1231f6dfbefdSBarry Smith   Notes:
1232f6dfbefdSBarry Smith   Users can provide a context when constructing the `SNES` options and then access it inside their function, Jacobian, or other evaluation function
1233f6dfbefdSBarry Smith   with `SNESGetApplicationContext()`
1234f6dfbefdSBarry Smith 
1235f6dfbefdSBarry Smith   To provide a function that computes the context for you use `SNESSetComputeApplicationContext()`
1236f6dfbefdSBarry Smith 
1237420bcc1bSBarry Smith   Fortran Note:
1238dc4c0fb0SBarry Smith   You must write a Fortran interface definition for this
1239420bcc1bSBarry Smith   function that tells Fortran the Fortran derived data type that you are passing in as the `usrP` argument.
1240daf670e6SBarry Smith 
12411cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetComputeApplicationContext()`, `SNESGetApplicationContext()`
12429b94acceSBarry Smith @*/
1243d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetApplicationContext(SNES snes, void *usrP)
1244d71ae5a4SJacob Faibussowitsch {
1245b07ff414SBarry Smith   KSP ksp;
12461b2093e4SBarry Smith 
12473a40ed3dSBarry Smith   PetscFunctionBegin;
12480700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
12499566063dSJacob Faibussowitsch   PetscCall(SNESGetKSP(snes, &ksp));
12509566063dSJacob Faibussowitsch   PetscCall(KSPSetApplicationContext(ksp, usrP));
12519b94acceSBarry Smith   snes->user = usrP;
12523ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
12539b94acceSBarry Smith }
125474679c65SBarry Smith 
1255b07ff414SBarry Smith /*@
12569b94acceSBarry Smith   SNESGetApplicationContext - Gets the user-defined context for the
1257420bcc1bSBarry Smith   nonlinear solvers set with `SNESGetApplicationContext()` or `SNESSetComputeApplicationContext()`
12589b94acceSBarry Smith 
1259c7afd0dbSLois Curfman McInnes   Not Collective
1260c7afd0dbSLois Curfman McInnes 
12619b94acceSBarry Smith   Input Parameter:
1262f6dfbefdSBarry Smith . snes - `SNES` context
12639b94acceSBarry Smith 
12649b94acceSBarry Smith   Output Parameter:
12659b94acceSBarry Smith . usrP - user context
12669b94acceSBarry Smith 
126736851e7fSLois Curfman McInnes   Level: intermediate
126836851e7fSLois Curfman McInnes 
1269420bcc1bSBarry Smith   Fortran Note:
1270dc4c0fb0SBarry Smith   You must write a Fortran interface definition for this
1271420bcc1bSBarry Smith   function that tells Fortran the Fortran derived data type that you are passing in as the `usrP` argument.
1272dc4c0fb0SBarry Smith 
1273420bcc1bSBarry Smith .seealso: [](ch_snes), `SNESSetApplicationContext()`, `SNESSetComputeApplicationContext()`
12749b94acceSBarry Smith @*/
1275d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetApplicationContext(SNES snes, void *usrP)
1276d71ae5a4SJacob Faibussowitsch {
12773a40ed3dSBarry Smith   PetscFunctionBegin;
12780700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1279e71120c6SJed Brown   *(void **)usrP = snes->user;
12803ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
12819b94acceSBarry Smith }
128274679c65SBarry Smith 
12839b94acceSBarry Smith /*@
1284420bcc1bSBarry Smith   SNESSetUseMatrixFree - indicates that `SNES` should use matrix-free finite difference matrix-vector products to apply the Jacobian.
12853565c898SBarry Smith 
1286dc4c0fb0SBarry Smith   Logically Collective
12873565c898SBarry Smith 
12883565c898SBarry Smith   Input Parameters:
1289f6dfbefdSBarry Smith + snes        - `SNES` context
1290f6dfbefdSBarry Smith . mf_operator - use matrix-free only for the Amat used by `SNESSetJacobian()`, this means the user provided Pmat will continue to be used
1291f6dfbefdSBarry Smith - mf          - use matrix-free for both the Amat and Pmat used by `SNESSetJacobian()`, both the Amat and Pmat set in `SNESSetJacobian()` will be ignored. With
1292420bcc1bSBarry Smith    this option no matrix-element based preconditioners can be used in the linear solve since the matrix won't be explicitly available
12933565c898SBarry Smith 
1294f6dfbefdSBarry Smith   Options Database Keys:
129501c1178eSBarry Smith + -snes_mf_operator - use matrix-free only for the mat operator
1296f6dfbefdSBarry Smith . -snes_mf          - use matrix-free for both the mat and pmat operator
1297ec5066bdSBarry Smith . -snes_fd_color    - compute the Jacobian via coloring and finite differences.
1298ec5066bdSBarry Smith - -snes_fd          - compute the Jacobian via finite differences (slow)
12993565c898SBarry Smith 
13003565c898SBarry Smith   Level: intermediate
13013565c898SBarry Smith 
1302f6dfbefdSBarry Smith   Note:
1303420bcc1bSBarry Smith   `SNES` supports three approaches for computing (approximate) Jacobians: user provided via `SNESSetJacobian()`, matrix-free using `MatCreateSNESMF()`,
1304420bcc1bSBarry Smith   and computing explicitly with
1305f6dfbefdSBarry Smith   finite differences and coloring using `MatFDColoring`. It is also possible to use automatic differentiation and the `MatFDColoring` object.
1306ec5066bdSBarry Smith 
1307420bcc1bSBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetUseMatrixFree()`, `MatCreateSNESMF()`, `SNESComputeJacobianDefaultColor()`, `MatFDColoring`
13083565c898SBarry Smith @*/
1309d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetUseMatrixFree(SNES snes, PetscBool mf_operator, PetscBool mf)
1310d71ae5a4SJacob Faibussowitsch {
13113565c898SBarry Smith   PetscFunctionBegin;
13123565c898SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
131388b4c220SStefano Zampini   PetscValidLogicalCollectiveBool(snes, mf_operator, 2);
131488b4c220SStefano Zampini   PetscValidLogicalCollectiveBool(snes, mf, 3);
13154ddffce6SLisandro Dalcin   snes->mf          = mf_operator ? PETSC_TRUE : mf;
13163565c898SBarry Smith   snes->mf_operator = mf_operator;
13173ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
13183565c898SBarry Smith }
13193565c898SBarry Smith 
13203565c898SBarry Smith /*@
1321dc4c0fb0SBarry Smith   SNESGetUseMatrixFree - indicates if the `SNES` uses matrix-free finite difference matrix vector products to apply the Jacobian.
13223565c898SBarry Smith 
1323420bcc1bSBarry Smith   Not Collective, but the resulting flags will be the same on all MPI processes
13243565c898SBarry Smith 
13253565c898SBarry Smith   Input Parameter:
1326f6dfbefdSBarry Smith . snes - `SNES` context
13273565c898SBarry Smith 
13283565c898SBarry Smith   Output Parameters:
1329f6dfbefdSBarry Smith + mf_operator - use matrix-free only for the Amat used by `SNESSetJacobian()`, this means the user provided Pmat will continue to be used
1330f6dfbefdSBarry Smith - mf          - use matrix-free for both the Amat and Pmat used by `SNESSetJacobian()`, both the Amat and Pmat set in `SNESSetJacobian()` will be ignored
13313565c898SBarry Smith 
13323565c898SBarry Smith   Level: intermediate
13333565c898SBarry Smith 
13341cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetUseMatrixFree()`, `MatCreateSNESMF()`
13353565c898SBarry Smith @*/
1336d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetUseMatrixFree(SNES snes, PetscBool *mf_operator, PetscBool *mf)
1337d71ae5a4SJacob Faibussowitsch {
13383565c898SBarry Smith   PetscFunctionBegin;
13393565c898SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
13403565c898SBarry Smith   if (mf) *mf = snes->mf;
13413565c898SBarry Smith   if (mf_operator) *mf_operator = snes->mf_operator;
13423ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
13433565c898SBarry Smith }
13443565c898SBarry Smith 
13453565c898SBarry Smith /*@
1346420bcc1bSBarry Smith   SNESGetIterationNumber - Gets the number of nonlinear iterations completed in the current or most recent `SNESSolve()`
13479b94acceSBarry Smith 
1348c7afd0dbSLois Curfman McInnes   Not Collective
1349c7afd0dbSLois Curfman McInnes 
13509b94acceSBarry Smith   Input Parameter:
1351f6dfbefdSBarry Smith . snes - `SNES` context
13529b94acceSBarry Smith 
13539b94acceSBarry Smith   Output Parameter:
13549b94acceSBarry Smith . iter - iteration number
13559b94acceSBarry Smith 
1356dc4c0fb0SBarry Smith   Level: intermediate
1357dc4c0fb0SBarry Smith 
1358c8228a4eSBarry Smith   Notes:
1359c8228a4eSBarry Smith   For example, during the computation of iteration 2 this would return 1.
1360c8228a4eSBarry Smith 
1361c8228a4eSBarry Smith   This is useful for using lagged Jacobians (where one does not recompute the
1362f6dfbefdSBarry Smith   Jacobian at each `SNES` iteration). For example, the code
136308405cd6SLois Curfman McInnes .vb
136408405cd6SLois Curfman McInnes       ierr = SNESGetIterationNumber(snes,&it);
136508405cd6SLois Curfman McInnes       if (!(it % 2)) {
136608405cd6SLois Curfman McInnes         [compute Jacobian here]
136708405cd6SLois Curfman McInnes       }
136808405cd6SLois Curfman McInnes .ve
1369f6dfbefdSBarry Smith   can be used in your function that computes the Jacobian to cause the Jacobian to be
1370f6dfbefdSBarry Smith   recomputed every second `SNES` iteration. See also `SNESSetLagJacobian()`
1371c8228a4eSBarry Smith 
1372f6dfbefdSBarry Smith   After the `SNES` solve is complete this will return the number of nonlinear iterations used.
1373c04deec6SBarry Smith 
1374420bcc1bSBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetLagJacobian()`, `SNESGetLinearSolveIterations()`, `SNESSetMonitor()`
13759b94acceSBarry Smith @*/
1376d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetIterationNumber(SNES snes, PetscInt *iter)
1377d71ae5a4SJacob Faibussowitsch {
13783a40ed3dSBarry Smith   PetscFunctionBegin;
13790700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
13804f572ea9SToby Isaac   PetscAssertPointer(iter, 2);
13819b94acceSBarry Smith   *iter = snes->iter;
13823ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
13839b94acceSBarry Smith }
138474679c65SBarry Smith 
1385360c497dSPeter Brune /*@
1386360c497dSPeter Brune   SNESSetIterationNumber - Sets the current iteration number.
1387360c497dSPeter Brune 
1388360c497dSPeter Brune   Not Collective
1389360c497dSPeter Brune 
1390d8d19677SJose E. Roman   Input Parameters:
1391f6dfbefdSBarry Smith + snes - `SNES` context
1392a2b725a8SWilliam Gropp - iter - iteration number
1393360c497dSPeter Brune 
1394360c497dSPeter Brune   Level: developer
1395360c497dSPeter Brune 
1396420bcc1bSBarry Smith   Note:
1397420bcc1bSBarry Smith   This should only be called inside a `SNES` nonlinear solver.
1398420bcc1bSBarry Smith 
13991cc06b55SBarry Smith .seealso: [](ch_snes), `SNESGetLinearSolveIterations()`
1400360c497dSPeter Brune @*/
1401d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetIterationNumber(SNES snes, PetscInt iter)
1402d71ae5a4SJacob Faibussowitsch {
1403360c497dSPeter Brune   PetscFunctionBegin;
1404360c497dSPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
14059566063dSJacob Faibussowitsch   PetscCall(PetscObjectSAWsTakeAccess((PetscObject)snes));
1406360c497dSPeter Brune   snes->iter = iter;
14079566063dSJacob Faibussowitsch   PetscCall(PetscObjectSAWsGrantAccess((PetscObject)snes));
14083ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1409360c497dSPeter Brune }
1410360c497dSPeter Brune 
14119b94acceSBarry Smith /*@
1412b850b91aSLisandro Dalcin   SNESGetNonlinearStepFailures - Gets the number of unsuccessful steps
1413420bcc1bSBarry Smith   attempted by the nonlinear solver in the current or most recent `SNESSolve()` .
14149b94acceSBarry Smith 
1415c7afd0dbSLois Curfman McInnes   Not Collective
1416c7afd0dbSLois Curfman McInnes 
14179b94acceSBarry Smith   Input Parameter:
1418f6dfbefdSBarry Smith . snes - `SNES` context
14199b94acceSBarry Smith 
14209b94acceSBarry Smith   Output Parameter:
14219b94acceSBarry Smith . nfails - number of unsuccessful steps attempted
14229b94acceSBarry Smith 
1423dc4c0fb0SBarry Smith   Level: intermediate
1424dc4c0fb0SBarry Smith 
1425f6dfbefdSBarry Smith   Note:
1426f6dfbefdSBarry Smith   This counter is reset to zero for each successive call to `SNESSolve()`.
1427c96a6f78SLois Curfman McInnes 
14281cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetMaxLinearSolveFailures()`, `SNESGetLinearSolveIterations()`, `SNESSetMaxLinearSolveFailures()`, `SNESGetLinearSolveFailures()`,
1429db781477SPatrick Sanan           `SNESSetMaxNonlinearStepFailures()`, `SNESGetMaxNonlinearStepFailures()`
14309b94acceSBarry Smith @*/
1431d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetNonlinearStepFailures(SNES snes, PetscInt *nfails)
1432d71ae5a4SJacob Faibussowitsch {
14333a40ed3dSBarry Smith   PetscFunctionBegin;
14340700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
14354f572ea9SToby Isaac   PetscAssertPointer(nfails, 2);
143650ffb88aSMatthew Knepley   *nfails = snes->numFailures;
14373ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
143850ffb88aSMatthew Knepley }
143950ffb88aSMatthew Knepley 
144050ffb88aSMatthew Knepley /*@
1441b850b91aSLisandro Dalcin   SNESSetMaxNonlinearStepFailures - Sets the maximum number of unsuccessful steps
1442420bcc1bSBarry Smith   attempted by the nonlinear solver before it gives up and returns unconverged or generates an error
144350ffb88aSMatthew Knepley 
144450ffb88aSMatthew Knepley   Not Collective
144550ffb88aSMatthew Knepley 
144650ffb88aSMatthew Knepley   Input Parameters:
1447f6dfbefdSBarry Smith + snes     - `SNES` context
144850ffb88aSMatthew Knepley - maxFails - maximum of unsuccessful steps
144950ffb88aSMatthew Knepley 
1450420bcc1bSBarry Smith   Options Database Key:
1451420bcc1bSBarry Smith . -snes_max_fail <n> - maximum number of unsuccessful steps allowed
1452420bcc1bSBarry Smith 
145350ffb88aSMatthew Knepley   Level: intermediate
145450ffb88aSMatthew Knepley 
1455420bcc1bSBarry Smith   Developer Note:
1456420bcc1bSBarry Smith   The options database key is wrong for this function name
1457420bcc1bSBarry Smith 
14581cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetErrorIfNotConverged()`, `SNESGetMaxLinearSolveFailures()`, `SNESGetLinearSolveIterations()`, `SNESSetMaxLinearSolveFailures()`, `SNESGetLinearSolveFailures()`,
1459db781477SPatrick Sanan           `SNESGetMaxNonlinearStepFailures()`, `SNESGetNonlinearStepFailures()`
146050ffb88aSMatthew Knepley @*/
1461d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetMaxNonlinearStepFailures(SNES snes, PetscInt maxFails)
1462d71ae5a4SJacob Faibussowitsch {
146350ffb88aSMatthew Knepley   PetscFunctionBegin;
14640700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
146550ffb88aSMatthew Knepley   snes->maxFailures = maxFails;
14663ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
146750ffb88aSMatthew Knepley }
146850ffb88aSMatthew Knepley 
146950ffb88aSMatthew Knepley /*@
1470b850b91aSLisandro Dalcin   SNESGetMaxNonlinearStepFailures - Gets the maximum number of unsuccessful steps
1471420bcc1bSBarry Smith   attempted by the nonlinear solver before it gives up and returns unconverged or generates an error
147250ffb88aSMatthew Knepley 
147350ffb88aSMatthew Knepley   Not Collective
147450ffb88aSMatthew Knepley 
147550ffb88aSMatthew Knepley   Input Parameter:
147620f4b53cSBarry Smith . snes - `SNES` context
147750ffb88aSMatthew Knepley 
147850ffb88aSMatthew Knepley   Output Parameter:
147950ffb88aSMatthew Knepley . maxFails - maximum of unsuccessful steps
148050ffb88aSMatthew Knepley 
148150ffb88aSMatthew Knepley   Level: intermediate
148250ffb88aSMatthew Knepley 
14831cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetErrorIfNotConverged()`, `SNESGetMaxLinearSolveFailures()`, `SNESGetLinearSolveIterations()`, `SNESSetMaxLinearSolveFailures()`, `SNESGetLinearSolveFailures()`,
1484db781477SPatrick Sanan           `SNESSetMaxNonlinearStepFailures()`, `SNESGetNonlinearStepFailures()`
148550ffb88aSMatthew Knepley @*/
1486d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetMaxNonlinearStepFailures(SNES snes, PetscInt *maxFails)
1487d71ae5a4SJacob Faibussowitsch {
148850ffb88aSMatthew Knepley   PetscFunctionBegin;
14890700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
14904f572ea9SToby Isaac   PetscAssertPointer(maxFails, 2);
149150ffb88aSMatthew Knepley   *maxFails = snes->maxFailures;
14923ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
14939b94acceSBarry Smith }
1494a847f771SSatish Balay 
14952541af92SBarry Smith /*@
14962541af92SBarry Smith   SNESGetNumberFunctionEvals - Gets the number of user provided function evaluations
1497420bcc1bSBarry Smith   done by the `SNES` object in the current or most recent `SNESSolve()`
14982541af92SBarry Smith 
14992541af92SBarry Smith   Not Collective
15002541af92SBarry Smith 
15012541af92SBarry Smith   Input Parameter:
1502f6dfbefdSBarry Smith . snes - `SNES` context
15032541af92SBarry Smith 
15042541af92SBarry Smith   Output Parameter:
15052541af92SBarry Smith . nfuncs - number of evaluations
15062541af92SBarry Smith 
15072541af92SBarry Smith   Level: intermediate
15082541af92SBarry Smith 
1509f6dfbefdSBarry Smith   Note:
1510f6dfbefdSBarry Smith   Reset every time `SNESSolve()` is called unless `SNESSetCountersReset()` is used.
1511971e163fSPeter Brune 
15121cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetMaxLinearSolveFailures()`, `SNESGetLinearSolveIterations()`, `SNESSetMaxLinearSolveFailures()`, `SNESGetLinearSolveFailures()`, `SNESSetCountersReset()`
15132541af92SBarry Smith @*/
1514d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetNumberFunctionEvals(SNES snes, PetscInt *nfuncs)
1515d71ae5a4SJacob Faibussowitsch {
15162541af92SBarry Smith   PetscFunctionBegin;
15170700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
15184f572ea9SToby Isaac   PetscAssertPointer(nfuncs, 2);
15192541af92SBarry Smith   *nfuncs = snes->nfuncs;
15203ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
15212541af92SBarry Smith }
15222541af92SBarry Smith 
15233d4c4710SBarry Smith /*@
15243d4c4710SBarry Smith   SNESGetLinearSolveFailures - Gets the number of failed (non-converged)
1525420bcc1bSBarry Smith   linear solvers in the current or most recent `SNESSolve()`
15263d4c4710SBarry Smith 
15273d4c4710SBarry Smith   Not Collective
15283d4c4710SBarry Smith 
15293d4c4710SBarry Smith   Input Parameter:
1530f6dfbefdSBarry Smith . snes - `SNES` context
15313d4c4710SBarry Smith 
15323d4c4710SBarry Smith   Output Parameter:
15333d4c4710SBarry Smith . nfails - number of failed solves
15343d4c4710SBarry Smith 
1535f6dfbefdSBarry Smith   Options Database Key:
15369d85da0cSMatthew G. Knepley . -snes_max_linear_solve_fail <num> - The number of failures before the solve is terminated
15379d85da0cSMatthew G. Knepley 
1538f6dfbefdSBarry Smith   Level: intermediate
1539f6dfbefdSBarry Smith 
1540f6dfbefdSBarry Smith   Note:
1541f6dfbefdSBarry Smith   This counter is reset to zero for each successive call to `SNESSolve()`.
15423d4c4710SBarry Smith 
15431cc06b55SBarry Smith .seealso: [](ch_snes), `SNESGetMaxLinearSolveFailures()`, `SNESGetLinearSolveIterations()`, `SNESSetMaxLinearSolveFailures()`
15443d4c4710SBarry Smith @*/
1545d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetLinearSolveFailures(SNES snes, PetscInt *nfails)
1546d71ae5a4SJacob Faibussowitsch {
15473d4c4710SBarry Smith   PetscFunctionBegin;
15480700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
15494f572ea9SToby Isaac   PetscAssertPointer(nfails, 2);
15503d4c4710SBarry Smith   *nfails = snes->numLinearSolveFailures;
15513ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
15523d4c4710SBarry Smith }
15533d4c4710SBarry Smith 
15543d4c4710SBarry Smith /*@
15553d4c4710SBarry Smith   SNESSetMaxLinearSolveFailures - the number of failed linear solve attempts
1556f6dfbefdSBarry Smith   allowed before `SNES` returns with a diverged reason of `SNES_DIVERGED_LINEAR_SOLVE`
15573d4c4710SBarry Smith 
1558c3339decSBarry Smith   Logically Collective
15593d4c4710SBarry Smith 
15603d4c4710SBarry Smith   Input Parameters:
1561f6dfbefdSBarry Smith + snes     - `SNES` context
15623d4c4710SBarry Smith - maxFails - maximum allowed linear solve failures
15633d4c4710SBarry Smith 
1564f6dfbefdSBarry Smith   Options Database Key:
15659d85da0cSMatthew G. Knepley . -snes_max_linear_solve_fail <num> - The number of failures before the solve is terminated
15669d85da0cSMatthew G. Knepley 
1567dc4c0fb0SBarry Smith   Level: intermediate
1568dc4c0fb0SBarry Smith 
1569f6dfbefdSBarry Smith   Note:
1570f6dfbefdSBarry Smith   By default this is 0; that is `SNES` returns on the first failed linear solve
15713d4c4710SBarry Smith 
1572420bcc1bSBarry Smith   Developer Note:
1573420bcc1bSBarry Smith   The options database key is wrong for this function name
1574420bcc1bSBarry Smith 
15751cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetErrorIfNotConverged()`, `SNESGetLinearSolveFailures()`, `SNESGetMaxLinearSolveFailures()`, `SNESGetLinearSolveIterations()`
15763d4c4710SBarry Smith @*/
1577d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetMaxLinearSolveFailures(SNES snes, PetscInt maxFails)
1578d71ae5a4SJacob Faibussowitsch {
15793d4c4710SBarry Smith   PetscFunctionBegin;
15800700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1581c5eb9154SBarry Smith   PetscValidLogicalCollectiveInt(snes, maxFails, 2);
15823d4c4710SBarry Smith   snes->maxLinearSolveFailures = maxFails;
15833ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
15843d4c4710SBarry Smith }
15853d4c4710SBarry Smith 
15863d4c4710SBarry Smith /*@
15873d4c4710SBarry Smith   SNESGetMaxLinearSolveFailures - gets the maximum number of linear solve failures that
1588f6dfbefdSBarry Smith   are allowed before `SNES` returns as unsuccessful
15893d4c4710SBarry Smith 
15903d4c4710SBarry Smith   Not Collective
15913d4c4710SBarry Smith 
15923d4c4710SBarry Smith   Input Parameter:
1593f6dfbefdSBarry Smith . snes - `SNES` context
15943d4c4710SBarry Smith 
15953d4c4710SBarry Smith   Output Parameter:
15963d4c4710SBarry Smith . maxFails - maximum of unsuccessful solves allowed
15973d4c4710SBarry Smith 
15983d4c4710SBarry Smith   Level: intermediate
15993d4c4710SBarry Smith 
1600f6dfbefdSBarry Smith   Note:
1601f6dfbefdSBarry Smith   By default this is 1; that is `SNES` returns on the first failed linear solve
16023d4c4710SBarry Smith 
16031cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetErrorIfNotConverged()`, `SNESGetLinearSolveFailures()`, `SNESGetLinearSolveIterations()`, `SNESSetMaxLinearSolveFailures()`,
16043d4c4710SBarry Smith @*/
1605d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetMaxLinearSolveFailures(SNES snes, PetscInt *maxFails)
1606d71ae5a4SJacob Faibussowitsch {
16073d4c4710SBarry Smith   PetscFunctionBegin;
16080700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
16094f572ea9SToby Isaac   PetscAssertPointer(maxFails, 2);
16103d4c4710SBarry Smith   *maxFails = snes->maxLinearSolveFailures;
16113ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
16123d4c4710SBarry Smith }
16133d4c4710SBarry Smith 
1614c96a6f78SLois Curfman McInnes /*@
1615b850b91aSLisandro Dalcin   SNESGetLinearSolveIterations - Gets the total number of linear iterations
1616420bcc1bSBarry Smith   used by the nonlinear solver in the most recent `SNESSolve()`
1617c96a6f78SLois Curfman McInnes 
1618c7afd0dbSLois Curfman McInnes   Not Collective
1619c7afd0dbSLois Curfman McInnes 
1620c96a6f78SLois Curfman McInnes   Input Parameter:
1621f6dfbefdSBarry Smith . snes - `SNES` context
1622c96a6f78SLois Curfman McInnes 
1623c96a6f78SLois Curfman McInnes   Output Parameter:
1624c96a6f78SLois Curfman McInnes . lits - number of linear iterations
1625c96a6f78SLois Curfman McInnes 
1626dc4c0fb0SBarry Smith   Level: intermediate
1627dc4c0fb0SBarry Smith 
1628c96a6f78SLois Curfman McInnes   Notes:
1629f6dfbefdSBarry Smith   This counter is reset to zero for each successive call to `SNESSolve()` unless `SNESSetCountersReset()` is used.
1630c96a6f78SLois Curfman McInnes 
1631f6dfbefdSBarry Smith   If the linear solver fails inside the `SNESSolve()` the iterations for that call to the linear solver are not included. If you wish to count them
1632f6dfbefdSBarry Smith   then call `KSPGetIterationNumber()` after the failed solve.
1633010be392SBarry Smith 
16341cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetIterationNumber()`, `SNESGetLinearSolveFailures()`, `SNESGetMaxLinearSolveFailures()`, `SNESSetCountersReset()`
1635c96a6f78SLois Curfman McInnes @*/
1636d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetLinearSolveIterations(SNES snes, PetscInt *lits)
1637d71ae5a4SJacob Faibussowitsch {
16383a40ed3dSBarry Smith   PetscFunctionBegin;
16390700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
16404f572ea9SToby Isaac   PetscAssertPointer(lits, 2);
1641c96a6f78SLois Curfman McInnes   *lits = snes->linear_its;
16423ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1643c96a6f78SLois Curfman McInnes }
1644c96a6f78SLois Curfman McInnes 
1645971e163fSPeter Brune /*@
1646971e163fSPeter Brune   SNESSetCountersReset - Sets whether or not the counters for linear iterations and function evaluations
1647f6dfbefdSBarry Smith   are reset every time `SNESSolve()` is called.
1648971e163fSPeter Brune 
1649c3339decSBarry Smith   Logically Collective
1650971e163fSPeter Brune 
1651d8d19677SJose E. Roman   Input Parameters:
1652f6dfbefdSBarry Smith + snes  - `SNES` context
1653f6dfbefdSBarry Smith - reset - whether to reset the counters or not, defaults to `PETSC_TRUE`
1654971e163fSPeter Brune 
1655971e163fSPeter Brune   Level: developer
1656971e163fSPeter Brune 
16571cc06b55SBarry Smith .seealso: [](ch_snes), `SNESGetNumberFunctionEvals()`, `SNESGetLinearSolveIterations()`, `SNESGetNPC()`
1658971e163fSPeter Brune @*/
1659d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetCountersReset(SNES snes, PetscBool reset)
1660d71ae5a4SJacob Faibussowitsch {
1661971e163fSPeter Brune   PetscFunctionBegin;
1662971e163fSPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1663971e163fSPeter Brune   PetscValidLogicalCollectiveBool(snes, reset, 2);
1664971e163fSPeter Brune   snes->counters_reset = reset;
16653ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1666971e163fSPeter Brune }
1667971e163fSPeter Brune 
16682999313aSBarry Smith /*@
1669f6dfbefdSBarry Smith   SNESSetKSP - Sets a `KSP` context for the `SNES` object to use
16702999313aSBarry Smith 
1671420bcc1bSBarry Smith   Not Collective, but the `SNES` and `KSP` objects must live on the same `MPI_Comm`
16722999313aSBarry Smith 
16732999313aSBarry Smith   Input Parameters:
1674f6dfbefdSBarry Smith + snes - the `SNES` context
1675f6dfbefdSBarry Smith - ksp  - the `KSP` context
16762999313aSBarry Smith 
1677dc4c0fb0SBarry Smith   Level: developer
1678dc4c0fb0SBarry Smith 
16792999313aSBarry Smith   Notes:
1680f6dfbefdSBarry Smith   The `SNES` object already has its `KSP` object, you can obtain with `SNESGetKSP()`
16812999313aSBarry Smith   so this routine is rarely needed.
16822999313aSBarry Smith 
1683f6dfbefdSBarry Smith   The `KSP` object that is already in the `SNES` object has its reference count
1684420bcc1bSBarry Smith   decreased by one when this is called.
16852999313aSBarry Smith 
168642747ad1SJacob Faibussowitsch .seealso: [](ch_snes), `SNES`, `KSP`, `KSPGetPC()`, `SNESCreate()`, `KSPCreate()`
16872999313aSBarry Smith @*/
1688d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetKSP(SNES snes, KSP ksp)
1689d71ae5a4SJacob Faibussowitsch {
16902999313aSBarry Smith   PetscFunctionBegin;
16910700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
16920700a824SBarry Smith   PetscValidHeaderSpecific(ksp, KSP_CLASSID, 2);
16932999313aSBarry Smith   PetscCheckSameComm(snes, 1, ksp, 2);
16949566063dSJacob Faibussowitsch   PetscCall(PetscObjectReference((PetscObject)ksp));
16959566063dSJacob Faibussowitsch   if (snes->ksp) PetscCall(PetscObjectDereference((PetscObject)snes->ksp));
16962999313aSBarry Smith   snes->ksp = ksp;
16973ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
16982999313aSBarry Smith }
16992999313aSBarry Smith 
170052baeb72SSatish Balay /*@
1701dc4c0fb0SBarry Smith   SNESCreate - Creates a nonlinear solver context used to manage a set of nonlinear solves
17029b94acceSBarry Smith 
1703d083f849SBarry Smith   Collective
1704c7afd0dbSLois Curfman McInnes 
1705f6dfbefdSBarry Smith   Input Parameter:
1706906ed7ccSBarry Smith . comm - MPI communicator
17079b94acceSBarry Smith 
17089b94acceSBarry Smith   Output Parameter:
170920f4b53cSBarry Smith . outsnes - the new `SNES` context
17109b94acceSBarry Smith 
1711c7afd0dbSLois Curfman McInnes   Options Database Keys:
1712dc4c0fb0SBarry Smith + -snes_mf          - Activates default matrix-free Jacobian-vector products, and no preconditioning matrix
1713dc4c0fb0SBarry Smith . -snes_mf_operator - Activates default matrix-free Jacobian-vector products, and a user-provided preconditioning matrix
1714dc4c0fb0SBarry Smith                as set by `SNESSetJacobian()`
1715dc4c0fb0SBarry Smith . -snes_fd_coloring - uses a relative fast computation of the Jacobian using finite differences and a graph coloring
1716c7afd0dbSLois Curfman McInnes - -snes_fd          - Uses (slow!) finite differences to compute Jacobian
1717c1f60f51SBarry Smith 
171836851e7fSLois Curfman McInnes   Level: beginner
171936851e7fSLois Curfman McInnes 
172095452b02SPatrick Sanan   Developer Notes:
1721f6dfbefdSBarry Smith   `SNES` always creates a `KSP` object even though many `SNES` methods do not use it. This is
1722efd4aadfSBarry Smith   unfortunate and should be fixed at some point. The flag snes->usesksp indicates if the
1723f6dfbefdSBarry Smith   particular method does use `KSP` and regulates if the information about the `KSP` is printed
1724f6dfbefdSBarry Smith   in `SNESView()`.
1725efd4aadfSBarry Smith 
1726f6dfbefdSBarry Smith   `TSSetFromOptions()` does call `SNESSetFromOptions()` which can lead to users being confused
1727f6dfbefdSBarry Smith   by help messages about meaningless `SNES` options.
1728f6dfbefdSBarry Smith 
1729dc4c0fb0SBarry Smith   `SNES` always creates the snes->kspconvctx even though it is used by only one type. This should be fixed.
1730efd4aadfSBarry Smith 
1731e4094ef1SJacob Faibussowitsch .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESDestroy()`, `SNESSetLagPreconditioner()`, `SNESSetLagJacobian()`
17329b94acceSBarry Smith @*/
1733d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESCreate(MPI_Comm comm, SNES *outsnes)
1734d71ae5a4SJacob Faibussowitsch {
17359b94acceSBarry Smith   SNES       snes;
1736fa9f3622SBarry Smith   SNESKSPEW *kctx;
173737fcc0dbSBarry Smith 
17383a40ed3dSBarry Smith   PetscFunctionBegin;
17394f572ea9SToby Isaac   PetscAssertPointer(outsnes, 2);
17400298fd71SBarry Smith   *outsnes = NULL;
17419566063dSJacob Faibussowitsch   PetscCall(SNESInitializePackage());
17428ba1e511SMatthew Knepley 
17439566063dSJacob Faibussowitsch   PetscCall(PetscHeaderCreate(snes, SNES_CLASSID, "SNES", "Nonlinear solver", "SNES", comm, SNESDestroy, SNESView));
17447adad957SLisandro Dalcin 
17458d359177SBarry Smith   snes->ops->converged       = SNESConvergedDefault;
17462c155ee1SBarry Smith   snes->usesksp              = PETSC_TRUE;
174788976e71SPeter Brune   snes->tolerancesset        = PETSC_FALSE;
17489b94acceSBarry Smith   snes->max_its              = 50;
17499750a799SBarry Smith   snes->max_funcs            = 10000;
17509b94acceSBarry Smith   snes->norm                 = 0.0;
1751c1e67a49SFande Kong   snes->xnorm                = 0.0;
1752c1e67a49SFande Kong   snes->ynorm                = 0.0;
1753365a6726SPeter Brune   snes->normschedule         = SNES_NORM_ALWAYS;
17546c67d002SPeter Brune   snes->functype             = SNES_FUNCTION_DEFAULT;
17558ca48ce9SPierre Jolivet   snes->rtol                 = PetscDefined(USE_REAL_SINGLE) ? 1.e-5 : 1.e-8;
1756b4874afaSBarry Smith   snes->ttol                 = 0.0;
17578ca48ce9SPierre Jolivet   snes->abstol               = PetscDefined(USE_REAL_SINGLE) ? 1.e-25 : 1.e-50;
17588ca48ce9SPierre Jolivet   snes->stol                 = PetscDefined(USE_REAL_SINGLE) ? 1.e-5 : 1.e-8;
17598ca48ce9SPierre Jolivet   snes->deltatol             = PetscDefined(USE_REAL_SINGLE) ? 1.e-6 : 1.e-12;
1760e37c518bSBarry Smith   snes->divtol               = 1.e4;
1761e37c518bSBarry Smith   snes->rnorm0               = 0;
17629b94acceSBarry Smith   snes->nfuncs               = 0;
176350ffb88aSMatthew Knepley   snes->numFailures          = 0;
176450ffb88aSMatthew Knepley   snes->maxFailures          = 1;
17657a00f4a9SLois Curfman McInnes   snes->linear_its           = 0;
1766e35cf81dSBarry Smith   snes->lagjacobian          = 1;
176737ec4e1aSPeter Brune   snes->jac_iter             = 0;
176837ec4e1aSPeter Brune   snes->lagjac_persist       = PETSC_FALSE;
1769a8054027SBarry Smith   snes->lagpreconditioner    = 1;
177037ec4e1aSPeter Brune   snes->pre_iter             = 0;
177137ec4e1aSPeter Brune   snes->lagpre_persist       = PETSC_FALSE;
1772639f9d9dSBarry Smith   snes->numbermonitors       = 0;
1773c4421ceaSFande Kong   snes->numberreasonviews    = 0;
17749e5d0892SLisandro Dalcin   snes->data                 = NULL;
17754dc4c822SBarry Smith   snes->setupcalled          = PETSC_FALSE;
1776186905e3SBarry Smith   snes->ksp_ewconv           = PETSC_FALSE;
17776f24a144SLois Curfman McInnes   snes->nwork                = 0;
17789e5d0892SLisandro Dalcin   snes->work                 = NULL;
177958c9b817SLisandro Dalcin   snes->nvwork               = 0;
17809e5d0892SLisandro Dalcin   snes->vwork                = NULL;
1781758f92a0SBarry Smith   snes->conv_hist_len        = 0;
1782758f92a0SBarry Smith   snes->conv_hist_max        = 0;
17830298fd71SBarry Smith   snes->conv_hist            = NULL;
17840298fd71SBarry Smith   snes->conv_hist_its        = NULL;
1785758f92a0SBarry Smith   snes->conv_hist_reset      = PETSC_TRUE;
1786971e163fSPeter Brune   snes->counters_reset       = PETSC_TRUE;
1787e4ed7901SPeter Brune   snes->vec_func_init_set    = PETSC_FALSE;
1788184914b5SBarry Smith   snes->reason               = SNES_CONVERGED_ITERATING;
1789efd4aadfSBarry Smith   snes->npcside              = PC_RIGHT;
1790b3cd9a81SMatthew G. Knepley   snes->setfromoptionscalled = 0;
1791c40d0f55SPeter Brune 
1792d8f46077SPeter Brune   snes->mf          = PETSC_FALSE;
1793d8f46077SPeter Brune   snes->mf_operator = PETSC_FALSE;
1794d8f46077SPeter Brune   snes->mf_version  = 1;
1795d8f46077SPeter Brune 
17963d4c4710SBarry Smith   snes->numLinearSolveFailures = 0;
17973d4c4710SBarry Smith   snes->maxLinearSolveFailures = 1;
17983d4c4710SBarry Smith 
1799349187a7SBarry Smith   snes->vizerotolerance     = 1.e-8;
180076bd3646SJed Brown   snes->checkjacdomainerror = PetscDefined(USE_DEBUG) ? PETSC_TRUE : PETSC_FALSE;
1801349187a7SBarry Smith 
18024fc747eaSLawrence Mitchell   /* Set this to true if the implementation of SNESSolve_XXX does compute the residual at the final solution. */
18034fc747eaSLawrence Mitchell   snes->alwayscomputesfinalresidual = PETSC_FALSE;
18044fc747eaSLawrence Mitchell 
18059b94acceSBarry Smith   /* Create context to compute Eisenstat-Walker relative tolerance for KSP */
18064dfa11a4SJacob Faibussowitsch   PetscCall(PetscNew(&kctx));
1807f5af7f23SKarl Rupp 
18089b94acceSBarry Smith   snes->kspconvctx  = (void *)kctx;
18099b94acceSBarry Smith   kctx->version     = 2;
18100f0abf79SStefano Zampini   kctx->rtol_0      = 0.3; /* Eisenstat and Walker suggest rtol_0=.5, but
18119b94acceSBarry Smith                              this was too large for some test cases */
181275567043SBarry Smith   kctx->rtol_last   = 0.0;
18130f0abf79SStefano Zampini   kctx->rtol_max    = 0.9;
18149b94acceSBarry Smith   kctx->gamma       = 1.0;
18150f0abf79SStefano Zampini   kctx->alpha       = 0.5 * (1.0 + PetscSqrtReal(5.0));
181671f87433Sdalcinl   kctx->alpha2      = kctx->alpha;
18170f0abf79SStefano Zampini   kctx->threshold   = 0.1;
181875567043SBarry Smith   kctx->lresid_last = 0.0;
181975567043SBarry Smith   kctx->norm_last   = 0.0;
18209b94acceSBarry Smith 
18210f0abf79SStefano Zampini   kctx->rk_last     = 0.0;
18220f0abf79SStefano Zampini   kctx->rk_last_2   = 0.0;
18230f0abf79SStefano Zampini   kctx->rtol_last_2 = 0.0;
18240f0abf79SStefano Zampini   kctx->v4_p1       = 0.1;
18250f0abf79SStefano Zampini   kctx->v4_p2       = 0.4;
18260f0abf79SStefano Zampini   kctx->v4_p3       = 0.7;
18270f0abf79SStefano Zampini   kctx->v4_m1       = 0.8;
18280f0abf79SStefano Zampini   kctx->v4_m2       = 0.5;
18290f0abf79SStefano Zampini   kctx->v4_m3       = 0.1;
18300f0abf79SStefano Zampini   kctx->v4_m4       = 0.5;
18310f0abf79SStefano Zampini 
18329b94acceSBarry Smith   *outsnes = snes;
18333ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
18349b94acceSBarry Smith }
18359b94acceSBarry Smith 
183688f0584fSBarry Smith /*MC
1837f6dfbefdSBarry Smith     SNESFunction - Functional form used to convey the nonlinear function to `SNES` in `SNESSetFunction()`
183888f0584fSBarry Smith 
183988f0584fSBarry Smith      Synopsis:
1840411c0326SBarry Smith      #include "petscsnes.h"
1841411c0326SBarry Smith      PetscErrorCode SNESFunction(SNES snes,Vec x,Vec f,void *ctx);
184288f0584fSBarry Smith 
1843c3339decSBarry Smith      Collective
18441843f636SBarry Smith 
184588f0584fSBarry Smith      Input Parameters:
1846f6dfbefdSBarry Smith +     snes - the `SNES` context
184788f0584fSBarry Smith .     x    - state at which to evaluate residual
1848f6dfbefdSBarry Smith -     ctx     - optional user-defined function context, passed in with `SNESSetFunction()`
184988f0584fSBarry Smith 
185088f0584fSBarry Smith      Output Parameter:
185188f0584fSBarry Smith .     f  - vector to put residual (function value)
185288f0584fSBarry Smith 
1853878cb397SSatish Balay    Level: intermediate
1854878cb397SSatish Balay 
18551cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetFunction()`, `SNESGetFunction()`
185688f0584fSBarry Smith M*/
185788f0584fSBarry Smith 
18589b94acceSBarry Smith /*@C
18599b94acceSBarry Smith   SNESSetFunction - Sets the function evaluation routine and function
1860f6dfbefdSBarry Smith   vector for use by the `SNES` routines in solving systems of nonlinear
18619b94acceSBarry Smith   equations.
18629b94acceSBarry Smith 
1863c3339decSBarry Smith   Logically Collective
1864fee21e36SBarry Smith 
1865c7afd0dbSLois Curfman McInnes   Input Parameters:
1866f6dfbefdSBarry Smith + snes - the `SNES` context
1867dc4c0fb0SBarry Smith . r    - vector to store function values, may be `NULL`
186820f4b53cSBarry Smith . f    - function evaluation routine;  for calling sequence see `SNESFunction`
1869c7afd0dbSLois Curfman McInnes - ctx  - [optional] user-defined context for private data for the
1870dc4c0fb0SBarry Smith          function evaluation routine (may be `NULL`)
18719b94acceSBarry Smith 
187236851e7fSLois Curfman McInnes   Level: beginner
187336851e7fSLois Curfman McInnes 
18741cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetFunction()`, `SNESComputeFunction()`, `SNESSetJacobian()`, `SNESSetPicard()`, `SNESFunction`
18759b94acceSBarry Smith @*/
1876d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetFunction(SNES snes, Vec r, PetscErrorCode (*f)(SNES, Vec, Vec, void *), void *ctx)
1877d71ae5a4SJacob Faibussowitsch {
18786cab3a1bSJed Brown   DM dm;
18796cab3a1bSJed Brown 
18803a40ed3dSBarry Smith   PetscFunctionBegin;
18810700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1882d2a683ecSLisandro Dalcin   if (r) {
1883d2a683ecSLisandro Dalcin     PetscValidHeaderSpecific(r, VEC_CLASSID, 2);
1884d2a683ecSLisandro Dalcin     PetscCheckSameComm(snes, 1, r, 2);
18859566063dSJacob Faibussowitsch     PetscCall(PetscObjectReference((PetscObject)r));
18869566063dSJacob Faibussowitsch     PetscCall(VecDestroy(&snes->vec_func));
188785385478SLisandro Dalcin     snes->vec_func = r;
1888d2a683ecSLisandro Dalcin   }
18899566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
18909566063dSJacob Faibussowitsch   PetscCall(DMSNESSetFunction(dm, f, ctx));
189148a46eb9SPierre Jolivet   if (f == SNESPicardComputeFunction) PetscCall(DMSNESSetMFFunction(dm, SNESPicardComputeMFFunction, ctx));
18923ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
18939b94acceSBarry Smith }
18949b94acceSBarry Smith 
1895e4ed7901SPeter Brune /*@C
18960b4db180SJacob Faibussowitsch   SNESSetInitialFunction - Set an already computed function evaluation at the initial guess to be reused by `SNESSolve()`.
1897e4ed7901SPeter Brune 
1898c3339decSBarry Smith   Logically Collective
1899e4ed7901SPeter Brune 
1900e4ed7901SPeter Brune   Input Parameters:
1901f6dfbefdSBarry Smith + snes - the `SNES` context
1902e4ed7901SPeter Brune - f    - vector to store function value
1903e4ed7901SPeter Brune 
1904dc4c0fb0SBarry Smith   Level: developer
1905dc4c0fb0SBarry Smith 
1906e4ed7901SPeter Brune   Notes:
1907e4ed7901SPeter Brune   This should not be modified during the solution procedure.
1908e4ed7901SPeter Brune 
1909f6dfbefdSBarry Smith   This is used extensively in the `SNESFAS` hierarchy and in nonlinear preconditioning.
1910e4ed7901SPeter Brune 
19111cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESFAS`, `SNESSetFunction()`, `SNESComputeFunction()`, `SNESSetInitialFunctionNorm()`
1912e4ed7901SPeter Brune @*/
1913d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetInitialFunction(SNES snes, Vec f)
1914d71ae5a4SJacob Faibussowitsch {
1915e4ed7901SPeter Brune   Vec vec_func;
1916e4ed7901SPeter Brune 
1917e4ed7901SPeter Brune   PetscFunctionBegin;
1918e4ed7901SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1919e4ed7901SPeter Brune   PetscValidHeaderSpecific(f, VEC_CLASSID, 2);
1920e4ed7901SPeter Brune   PetscCheckSameComm(snes, 1, f, 2);
1921efd4aadfSBarry Smith   if (snes->npcside == PC_LEFT && snes->functype == SNES_FUNCTION_PRECONDITIONED) {
1922902f982fSPeter Brune     snes->vec_func_init_set = PETSC_FALSE;
19233ba16761SJacob Faibussowitsch     PetscFunctionReturn(PETSC_SUCCESS);
1924902f982fSPeter Brune   }
19259566063dSJacob Faibussowitsch   PetscCall(SNESGetFunction(snes, &vec_func, NULL, NULL));
19269566063dSJacob Faibussowitsch   PetscCall(VecCopy(f, vec_func));
1927f5af7f23SKarl Rupp 
1928217b9c2eSPeter Brune   snes->vec_func_init_set = PETSC_TRUE;
19293ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1930e4ed7901SPeter Brune }
1931e4ed7901SPeter Brune 
1932534ebe21SPeter Brune /*@
1933f6dfbefdSBarry Smith   SNESSetNormSchedule - Sets the `SNESNormSchedule` used in convergence and monitoring
1934f6dfbefdSBarry Smith   of the `SNES` method, when norms are computed in the solving process
1935534ebe21SPeter Brune 
1936c3339decSBarry Smith   Logically Collective
1937534ebe21SPeter Brune 
1938534ebe21SPeter Brune   Input Parameters:
1939f6dfbefdSBarry Smith + snes         - the `SNES` context
1940365a6726SPeter Brune - normschedule - the frequency of norm computation
1941534ebe21SPeter Brune 
1942517f1916SMatthew G. Knepley   Options Database Key:
194367b8a455SSatish Balay . -snes_norm_schedule <none, always, initialonly, finalonly, initialfinalonly> - set the schedule
1944517f1916SMatthew G. Knepley 
1945dc4c0fb0SBarry Smith   Level: advanced
1946dc4c0fb0SBarry Smith 
1947534ebe21SPeter Brune   Notes:
1948f6dfbefdSBarry Smith   Only certain `SNES` methods support certain `SNESNormSchedules`.  Most require evaluation
1949534ebe21SPeter Brune   of the nonlinear function and the taking of its norm at every iteration to
1950534ebe21SPeter Brune   even ensure convergence at all.  However, methods such as custom Gauss-Seidel methods
1951f6dfbefdSBarry Smith   `SNESNGS` and the like do not require the norm of the function to be computed, and therefore
1952534ebe21SPeter Brune   may either be monitored for convergence or not.  As these are often used as nonlinear
1953534ebe21SPeter Brune   preconditioners, monitoring the norm of their error is not a useful enterprise within
1954534ebe21SPeter Brune   their solution.
1955534ebe21SPeter Brune 
1956e4094ef1SJacob Faibussowitsch .seealso: [](ch_snes), `SNESNormSchedule`, `SNESGetNormSchedule()`, `SNESComputeFunction()`, `VecNorm()`, `SNESSetFunction()`, `SNESSetInitialFunction()`
1957534ebe21SPeter Brune @*/
1958d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetNormSchedule(SNES snes, SNESNormSchedule normschedule)
1959d71ae5a4SJacob Faibussowitsch {
1960534ebe21SPeter Brune   PetscFunctionBegin;
1961534ebe21SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1962365a6726SPeter Brune   snes->normschedule = normschedule;
19633ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1964534ebe21SPeter Brune }
1965534ebe21SPeter Brune 
1966534ebe21SPeter Brune /*@
1967f6dfbefdSBarry Smith   SNESGetNormSchedule - Gets the `SNESNormSchedule` used in convergence and monitoring
1968f6dfbefdSBarry Smith   of the `SNES` method.
1969534ebe21SPeter Brune 
1970c3339decSBarry Smith   Logically Collective
1971534ebe21SPeter Brune 
1972534ebe21SPeter Brune   Input Parameters:
1973f6dfbefdSBarry Smith + snes         - the `SNES` context
1974365a6726SPeter Brune - normschedule - the type of the norm used
1975534ebe21SPeter Brune 
1976534ebe21SPeter Brune   Level: advanced
1977534ebe21SPeter Brune 
19781cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetNormSchedule()`, `SNESComputeFunction()`, `VecNorm()`, `SNESSetFunction()`, `SNESSetInitialFunction()`, `SNESNormSchedule`
1979534ebe21SPeter Brune @*/
1980d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetNormSchedule(SNES snes, SNESNormSchedule *normschedule)
1981d71ae5a4SJacob Faibussowitsch {
1982534ebe21SPeter Brune   PetscFunctionBegin;
1983534ebe21SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1984365a6726SPeter Brune   *normschedule = snes->normschedule;
19853ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1986534ebe21SPeter Brune }
1987534ebe21SPeter Brune 
1988c5ce4427SMatthew G. Knepley /*@
1989c5ce4427SMatthew G. Knepley   SNESSetFunctionNorm - Sets the last computed residual norm.
1990c5ce4427SMatthew G. Knepley 
1991c3339decSBarry Smith   Logically Collective
1992c5ce4427SMatthew G. Knepley 
1993c5ce4427SMatthew G. Knepley   Input Parameters:
1994f6dfbefdSBarry Smith + snes - the `SNES` context
1995f6dfbefdSBarry Smith - norm - the value of the norm
1996c5ce4427SMatthew G. Knepley 
1997c5ce4427SMatthew G. Knepley   Level: developer
1998c5ce4427SMatthew G. Knepley 
19991cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetNormSchedule()`, `SNESComputeFunction()`, `VecNorm()`, `SNESSetFunction()`, `SNESSetInitialFunction()`, `SNESNormSchedule`
2000c5ce4427SMatthew G. Knepley @*/
2001d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetFunctionNorm(SNES snes, PetscReal norm)
2002d71ae5a4SJacob Faibussowitsch {
2003c5ce4427SMatthew G. Knepley   PetscFunctionBegin;
2004c5ce4427SMatthew G. Knepley   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2005c5ce4427SMatthew G. Knepley   snes->norm = norm;
20063ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2007c5ce4427SMatthew G. Knepley }
2008c5ce4427SMatthew G. Knepley 
2009c5ce4427SMatthew G. Knepley /*@
2010c5ce4427SMatthew G. Knepley   SNESGetFunctionNorm - Gets the last computed norm of the residual
2011c5ce4427SMatthew G. Knepley 
2012c5ce4427SMatthew G. Knepley   Not Collective
2013c5ce4427SMatthew G. Knepley 
2014c5ce4427SMatthew G. Knepley   Input Parameter:
2015f6dfbefdSBarry Smith . snes - the `SNES` context
2016c5ce4427SMatthew G. Knepley 
2017c5ce4427SMatthew G. Knepley   Output Parameter:
2018c5ce4427SMatthew G. Knepley . norm - the last computed residual norm
2019c5ce4427SMatthew G. Knepley 
2020c5ce4427SMatthew G. Knepley   Level: developer
2021c5ce4427SMatthew G. Knepley 
20221cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetNormSchedule()`, `SNESComputeFunction()`, `VecNorm()`, `SNESSetFunction()`, `SNESSetInitialFunction()`, `SNESNormSchedule`
2023c5ce4427SMatthew G. Knepley @*/
2024d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetFunctionNorm(SNES snes, PetscReal *norm)
2025d71ae5a4SJacob Faibussowitsch {
2026c5ce4427SMatthew G. Knepley   PetscFunctionBegin;
2027c5ce4427SMatthew G. Knepley   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
20284f572ea9SToby Isaac   PetscAssertPointer(norm, 2);
2029c5ce4427SMatthew G. Knepley   *norm = snes->norm;
20303ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2031c5ce4427SMatthew G. Knepley }
2032c5ce4427SMatthew G. Knepley 
2033c1e67a49SFande Kong /*@
2034f6dfbefdSBarry Smith   SNESGetUpdateNorm - Gets the last computed norm of the solution update
2035c1e67a49SFande Kong 
2036c1e67a49SFande Kong   Not Collective
2037c1e67a49SFande Kong 
2038c1e67a49SFande Kong   Input Parameter:
2039f6dfbefdSBarry Smith . snes - the `SNES` context
2040c1e67a49SFande Kong 
2041c1e67a49SFande Kong   Output Parameter:
2042c1e67a49SFande Kong . ynorm - the last computed update norm
2043c1e67a49SFande Kong 
2044c1e67a49SFande Kong   Level: developer
2045c1e67a49SFande Kong 
2046f6dfbefdSBarry Smith   Note:
2047f6dfbefdSBarry Smith   The new solution is the current solution plus the update, so this norm is an indication of the size of the update
2048f6dfbefdSBarry Smith 
20491cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetNormSchedule()`, `SNESComputeFunction()`, `SNESGetFunctionNorm()`
2050c1e67a49SFande Kong @*/
2051d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetUpdateNorm(SNES snes, PetscReal *ynorm)
2052d71ae5a4SJacob Faibussowitsch {
2053c1e67a49SFande Kong   PetscFunctionBegin;
2054c1e67a49SFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
20554f572ea9SToby Isaac   PetscAssertPointer(ynorm, 2);
2056c1e67a49SFande Kong   *ynorm = snes->ynorm;
20573ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2058c1e67a49SFande Kong }
2059c1e67a49SFande Kong 
2060c1e67a49SFande Kong /*@
20614591eaf2SFande Kong   SNESGetSolutionNorm - Gets the last computed norm of the solution
2062c1e67a49SFande Kong 
2063c1e67a49SFande Kong   Not Collective
2064c1e67a49SFande Kong 
2065c1e67a49SFande Kong   Input Parameter:
2066f6dfbefdSBarry Smith . snes - the `SNES` context
2067c1e67a49SFande Kong 
2068c1e67a49SFande Kong   Output Parameter:
2069c1e67a49SFande Kong . xnorm - the last computed solution norm
2070c1e67a49SFande Kong 
2071c1e67a49SFande Kong   Level: developer
2072c1e67a49SFande Kong 
20731cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetNormSchedule()`, `SNESComputeFunction()`, `SNESGetFunctionNorm()`, `SNESGetUpdateNorm()`
2074c1e67a49SFande Kong @*/
2075d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetSolutionNorm(SNES snes, PetscReal *xnorm)
2076d71ae5a4SJacob Faibussowitsch {
2077c1e67a49SFande Kong   PetscFunctionBegin;
2078c1e67a49SFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
20794f572ea9SToby Isaac   PetscAssertPointer(xnorm, 2);
2080c1e67a49SFande Kong   *xnorm = snes->xnorm;
20813ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2082c1e67a49SFande Kong }
2083c1e67a49SFande Kong 
208447073ea2SPeter Brune /*@C
2085f6dfbefdSBarry Smith   SNESSetFunctionType - Sets the `SNESFunctionType`
2086f6dfbefdSBarry Smith   of the `SNES` method.
208747073ea2SPeter Brune 
2088c3339decSBarry Smith   Logically Collective
208947073ea2SPeter Brune 
209047073ea2SPeter Brune   Input Parameters:
2091f6dfbefdSBarry Smith + snes - the `SNES` context
2092f6dfbefdSBarry Smith - type - the function type
209347073ea2SPeter Brune 
209447073ea2SPeter Brune   Level: developer
209547073ea2SPeter Brune 
2096420bcc1bSBarry Smith   Values of the function type\:
2097f6dfbefdSBarry Smith +  `SNES_FUNCTION_DEFAULT` - the default for the given `SNESType`
2098f6dfbefdSBarry Smith .  `SNES_FUNCTION_UNPRECONDITIONED` - an unpreconditioned function evaluation (this is the function provided with `SNESSetFunction()`
2099f6dfbefdSBarry Smith -  `SNES_FUNCTION_PRECONDITIONED` - a transformation of the function provided with `SNESSetFunction()`
2100f6dfbefdSBarry Smith 
2101420bcc1bSBarry Smith   Note:
2102f6dfbefdSBarry Smith   Different `SNESType`s use this value in different ways
2103f6dfbefdSBarry Smith 
21041cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESFunctionType`, `SNESGetNormSchedule()`, `SNESComputeFunction()`, `VecNorm()`, `SNESSetFunction()`, `SNESSetInitialFunction()`, `SNESNormSchedule`
210547073ea2SPeter Brune @*/
2106d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetFunctionType(SNES snes, SNESFunctionType type)
2107d71ae5a4SJacob Faibussowitsch {
210847073ea2SPeter Brune   PetscFunctionBegin;
210947073ea2SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
211047073ea2SPeter Brune   snes->functype = type;
21113ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
211247073ea2SPeter Brune }
211347073ea2SPeter Brune 
211447073ea2SPeter Brune /*@C
2115f6dfbefdSBarry Smith   SNESGetFunctionType - Gets the `SNESFunctionType` used in convergence and monitoring set with `SNESSetFunctionType()`
211647073ea2SPeter Brune   of the SNES method.
211747073ea2SPeter Brune 
2118c3339decSBarry Smith   Logically Collective
211947073ea2SPeter Brune 
212047073ea2SPeter Brune   Input Parameters:
2121f6dfbefdSBarry Smith + snes - the `SNES` context
2122f6dfbefdSBarry Smith - type - the type of the function evaluation, see `SNESSetFunctionType()`
212347073ea2SPeter Brune 
212447073ea2SPeter Brune   Level: advanced
212547073ea2SPeter Brune 
21261cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetFunctionType()`, `SNESFunctionType`, `SNESSetNormSchedule()`, `SNESComputeFunction()`, `VecNorm()`, `SNESSetFunction()`, `SNESSetInitialFunction()`, `SNESNormSchedule`
212747073ea2SPeter Brune @*/
2128d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetFunctionType(SNES snes, SNESFunctionType *type)
2129d71ae5a4SJacob Faibussowitsch {
213047073ea2SPeter Brune   PetscFunctionBegin;
213147073ea2SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
213247073ea2SPeter Brune   *type = snes->functype;
21333ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2134534ebe21SPeter Brune }
2135534ebe21SPeter Brune 
2136c79ef259SPeter Brune /*@C
2137be95d8f1SBarry Smith   SNESSetNGS - Sets the user nonlinear Gauss-Seidel routine for
2138c79ef259SPeter Brune   use with composed nonlinear solvers.
2139c79ef259SPeter Brune 
2140c79ef259SPeter Brune   Input Parameters:
2141dc4c0fb0SBarry Smith + snes - the `SNES` context
214237fdd005SBarry Smith . f    - function evaluation routine to apply Gauss-Seidel
2143c79ef259SPeter Brune - ctx  - [optional] user-defined context for private data for the
2144dc4c0fb0SBarry Smith             smoother evaluation routine (may be `NULL`)
2145c79ef259SPeter Brune 
214620f4b53cSBarry Smith   Calling sequence of `f`:
2147f6dfbefdSBarry Smith + snes - the `SNES` context
2148f6dfbefdSBarry Smith . X    - the current solution
2149dc4c0fb0SBarry Smith . B    - the right hand side vector (which may be `NULL`)
2150f6dfbefdSBarry Smith - ctx  - a user provided context
2151f6dfbefdSBarry Smith 
2152dc4c0fb0SBarry Smith   Level: intermediate
2153dc4c0fb0SBarry Smith 
2154f6dfbefdSBarry Smith   Note:
2155f6dfbefdSBarry Smith   The `SNESNGS` routines are used by the composed nonlinear solver to generate
2156f6dfbefdSBarry Smith   a problem appropriate update to the solution, particularly `SNESFAS`.
2157c79ef259SPeter Brune 
21581cc06b55SBarry Smith .seealso: [](ch_snes), `SNESGetNGS()`, `SNESNCG`, `SNESGetFunction()`, `SNESComputeNGS()`
2159c79ef259SPeter Brune @*/
21600b4db180SJacob Faibussowitsch PetscErrorCode SNESSetNGS(SNES snes, PetscErrorCode (*f)(SNES snes, Vec X, Vec B, void *ctx), void *ctx)
2161d71ae5a4SJacob Faibussowitsch {
21626cab3a1bSJed Brown   DM dm;
21636cab3a1bSJed Brown 
2164646217ecSPeter Brune   PetscFunctionBegin;
21656cab3a1bSJed Brown   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
21669566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
21679566063dSJacob Faibussowitsch   PetscCall(DMSNESSetNGS(dm, f, ctx));
21683ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2169646217ecSPeter Brune }
2170646217ecSPeter Brune 
2171bbc1464cSBarry Smith /*
2172bbc1464cSBarry Smith      This is used for -snes_mf_operator; it uses a duplicate of snes->jacobian_pre because snes->jacobian_pre cannot be
2173bbc1464cSBarry Smith    changed during the KSPSolve()
2174bbc1464cSBarry Smith */
2175d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESPicardComputeMFFunction(SNES snes, Vec x, Vec f, void *ctx)
2176d71ae5a4SJacob Faibussowitsch {
2177bbc1464cSBarry Smith   DM     dm;
2178bbc1464cSBarry Smith   DMSNES sdm;
2179bbc1464cSBarry Smith 
2180bbc1464cSBarry Smith   PetscFunctionBegin;
21819566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
21829566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &sdm));
2183bbc1464cSBarry Smith   /*  A(x)*x - b(x) */
2184bbc1464cSBarry Smith   if (sdm->ops->computepfunction) {
2185792fecdfSBarry Smith     PetscCallBack("SNES Picard callback function", (*sdm->ops->computepfunction)(snes, x, f, sdm->pctx));
21869566063dSJacob Faibussowitsch     PetscCall(VecScale(f, -1.0));
21870df40c35SBarry Smith     /* Cannot share nonzero pattern because of the possible use of SNESComputeJacobianDefault() */
2188ef1023bdSBarry Smith     if (!snes->picard) PetscCall(MatDuplicate(snes->jacobian_pre, MAT_DO_NOT_COPY_VALUES, &snes->picard));
2189792fecdfSBarry Smith     PetscCallBack("SNES Picard callback Jacobian", (*sdm->ops->computepjacobian)(snes, x, snes->picard, snes->picard, sdm->pctx));
21909566063dSJacob Faibussowitsch     PetscCall(MatMultAdd(snes->picard, x, f, f));
2191bbc1464cSBarry Smith   } else {
2192792fecdfSBarry Smith     PetscCallBack("SNES Picard callback Jacobian", (*sdm->ops->computepjacobian)(snes, x, snes->picard, snes->picard, sdm->pctx));
21939566063dSJacob Faibussowitsch     PetscCall(MatMult(snes->picard, x, f));
2194bbc1464cSBarry Smith   }
21953ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2196bbc1464cSBarry Smith }
2197bbc1464cSBarry Smith 
2198d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESPicardComputeFunction(SNES snes, Vec x, Vec f, void *ctx)
2199d71ae5a4SJacob Faibussowitsch {
2200e03ab78fSPeter Brune   DM     dm;
2201942e3340SBarry Smith   DMSNES sdm;
22026cab3a1bSJed Brown 
22038b0a5094SBarry Smith   PetscFunctionBegin;
22049566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
22059566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &sdm));
22068b0a5094SBarry Smith   /*  A(x)*x - b(x) */
2207bbc1464cSBarry Smith   if (sdm->ops->computepfunction) {
2208792fecdfSBarry Smith     PetscCallBack("SNES Picard callback function", (*sdm->ops->computepfunction)(snes, x, f, sdm->pctx));
22099566063dSJacob Faibussowitsch     PetscCall(VecScale(f, -1.0));
2210792fecdfSBarry Smith     PetscCallBack("SNES Picard callback Jacobian", (*sdm->ops->computepjacobian)(snes, x, snes->jacobian, snes->jacobian_pre, sdm->pctx));
22119566063dSJacob Faibussowitsch     PetscCall(MatMultAdd(snes->jacobian_pre, x, f, f));
2212bbc1464cSBarry Smith   } else {
2213792fecdfSBarry Smith     PetscCallBack("SNES Picard callback Jacobian", (*sdm->ops->computepjacobian)(snes, x, snes->jacobian, snes->jacobian_pre, sdm->pctx));
22149566063dSJacob Faibussowitsch     PetscCall(MatMult(snes->jacobian_pre, x, f));
2215bbc1464cSBarry Smith   }
22163ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
22178b0a5094SBarry Smith }
22188b0a5094SBarry Smith 
2219d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESPicardComputeJacobian(SNES snes, Vec x1, Mat J, Mat B, void *ctx)
2220d71ae5a4SJacob Faibussowitsch {
22218b0a5094SBarry Smith   PetscFunctionBegin;
2222e03ab78fSPeter Brune   /* the jacobian matrix should be pre-filled in SNESPicardComputeFunction */
2223bbc1464cSBarry Smith   /* must assembly if matrix-free to get the last SNES solution */
22249566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(J, MAT_FINAL_ASSEMBLY));
22259566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(J, MAT_FINAL_ASSEMBLY));
22263ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
22278b0a5094SBarry Smith }
22288b0a5094SBarry Smith 
22298b0a5094SBarry Smith /*@C
2230*1d27aa22SBarry Smith   SNESSetPicard - Use `SNES` to solve the system $A(x) x = bp(x) + b $ via a Picard type iteration (Picard linearization)
22318b0a5094SBarry Smith 
2232c3339decSBarry Smith   Logically Collective
22338b0a5094SBarry Smith 
22348b0a5094SBarry Smith   Input Parameters:
2235f6dfbefdSBarry Smith + snes - the `SNES` context
2236dc4c0fb0SBarry Smith . r    - vector to store function values, may be `NULL`
2237420bcc1bSBarry Smith . bp   - function evaluation routine, may be `NULL`, for the calling sequence see `SNESJacobianFunction`
22386b7fb656SBarry Smith . Amat - matrix with which A(x) x - bp(x) - b is to be computed
2239dc4c0fb0SBarry Smith . Pmat - matrix from which preconditioner is computed (usually the same as `Amat`)
2240420bcc1bSBarry Smith . J    - function to compute matrix values, for the calling sequence see `SNESJacobianFunction`
2241dc4c0fb0SBarry Smith - ctx  - [optional] user-defined context for private data for the function evaluation routine (may be `NULL`)
2242dc4c0fb0SBarry Smith 
2243dc4c0fb0SBarry Smith   Level: intermediate
22448b0a5094SBarry Smith 
22458b0a5094SBarry Smith   Notes:
22466b7fb656SBarry Smith   It is often better to provide the nonlinear function F() and some approximation to its Jacobian directly and use
2247f450aa47SBarry Smith   an approximate Newton solver. This interface is provided to allow porting/testing a previous Picard based code in PETSc before converting it to approximate Newton.
2248f450aa47SBarry Smith 
2249f6dfbefdSBarry Smith   One can call `SNESSetPicard()` or `SNESSetFunction()` (and possibly `SNESSetJacobian()`) but cannot call both
22508b0a5094SBarry Smith 
2251*1d27aa22SBarry Smith   Solves the equation $A(x) x = bp(x) - b$ via the defect correction algorithm $A(x^{n}) (x^{n+1} - x^{n}) = bp(x^{n}) + b - A(x^{n})x^{n}$.
2252*1d27aa22SBarry Smith   When an exact solver is used this corresponds to the "classic" Picard $A(x^{n}) x^{n+1} = bp(x^{n}) + b$ iteration.
22538b0a5094SBarry Smith 
2254dc4c0fb0SBarry Smith   Run with `-snes_mf_operator` to solve the system with Newton's method using A(x^{n}) to construct the preconditioner.
22558b0a5094SBarry Smith 
22560d04baf8SBarry Smith   We implement the defect correction form of the Picard iteration because it converges much more generally when inexact linear solvers are used then
2257*1d27aa22SBarry Smith   the direct Picard iteration $A(x^n) x^{n+1} = bp(x^n) + b$
22588b0a5094SBarry Smith 
22598b0a5094SBarry Smith   There is some controversity over the definition of a Picard iteration for nonlinear systems but almost everyone agrees that it involves a linear solve and some
2260*1d27aa22SBarry Smith   believe it is the iteration  $A(x^{n}) x^{n+1} = b(x^{n})$ hence we use the name Picard. If anyone has an authoritative  reference that defines the Picard iteration
2261*1d27aa22SBarry Smith   different please contact us at petsc-dev@mcs.anl.gov and we'll have an entirely new argument \:-).
22628b0a5094SBarry Smith 
2263*1d27aa22SBarry Smith   When used with `-snes_mf_operator` this will run matrix-free Newton's method where the matrix-vector product is of the true Jacobian of $A(x)x - bp(x) - b$ and
2264f6dfbefdSBarry Smith   A(x^{n}) is used to build the preconditioner
22656b7fb656SBarry Smith 
2266dc4c0fb0SBarry Smith   When used with `-snes_fd` this will compute the true Jacobian (very slowly one column at at time) and thus represent Newton's method.
22676b7fb656SBarry Smith 
2268dc4c0fb0SBarry Smith   When used with `-snes_fd_coloring` this will compute the Jacobian via coloring and thus represent a faster implementation of Newton's method. But the
22696b7fb656SBarry Smith   the nonzero structure of the Jacobian is, in general larger than that of the Picard matrix A so you must provide in A the needed nonzero structure for the correct
2270f6dfbefdSBarry Smith   coloring. When using `DMDA` this may mean creating the matrix A with `DMCreateMatrix()` using a wider stencil than strictly needed for A or with a `DMDA_STENCIL_BOX`.
2271aaa8cc7dSPierre Jolivet   See the comment in src/snes/tutorials/ex15.c.
2272bbc1464cSBarry Smith 
22731cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetFunction()`, `SNESSetFunction()`, `SNESComputeFunction()`, `SNESSetJacobian()`, `SNESGetPicard()`, `SNESLineSearchPreCheckPicard()`, `SNESJacobianFunction`
22748b0a5094SBarry Smith @*/
2275d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetPicard(SNES snes, Vec r, PetscErrorCode (*bp)(SNES, Vec, Vec, void *), Mat Amat, Mat Pmat, PetscErrorCode (*J)(SNES, Vec, Mat, Mat, void *), void *ctx)
2276d71ae5a4SJacob Faibussowitsch {
2277e03ab78fSPeter Brune   DM dm;
2278e03ab78fSPeter Brune 
22798b0a5094SBarry Smith   PetscFunctionBegin;
22808b0a5094SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
22819566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
22829566063dSJacob Faibussowitsch   PetscCall(DMSNESSetPicard(dm, bp, J, ctx));
22839566063dSJacob Faibussowitsch   PetscCall(DMSNESSetMFFunction(dm, SNESPicardComputeMFFunction, ctx));
22849566063dSJacob Faibussowitsch   PetscCall(SNESSetFunction(snes, r, SNESPicardComputeFunction, ctx));
22859566063dSJacob Faibussowitsch   PetscCall(SNESSetJacobian(snes, Amat, Pmat, SNESPicardComputeJacobian, ctx));
22863ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
22878b0a5094SBarry Smith }
22888b0a5094SBarry Smith 
22897971a8bfSPeter Brune /*@C
22907971a8bfSPeter Brune   SNESGetPicard - Returns the context for the Picard iteration
22917971a8bfSPeter Brune 
2292f6dfbefdSBarry Smith   Not Collective, but `Vec` is parallel if `SNES` is parallel. Collective if `Vec` is requested, but has not been created yet.
22937971a8bfSPeter Brune 
22947971a8bfSPeter Brune   Input Parameter:
2295f6dfbefdSBarry Smith . snes - the `SNES` context
22967971a8bfSPeter Brune 
2297d8d19677SJose E. Roman   Output Parameters:
2298dc4c0fb0SBarry Smith + r    - the function (or `NULL`)
229920f4b53cSBarry Smith . f    - the function (or `NULL`);  for calling sequence see `SNESFunction`
2300dc4c0fb0SBarry Smith . Amat - the matrix used to defined the operation A(x) x - b(x) (or `NULL`)
2301dc4c0fb0SBarry Smith . Pmat - the matrix from which the preconditioner will be constructed (or `NULL`)
230220f4b53cSBarry Smith . J    - the function for matrix evaluation (or `NULL`);  for calling sequence see `SNESJacobianFunction`
2303dc4c0fb0SBarry Smith - ctx  - the function context (or `NULL`)
23047971a8bfSPeter Brune 
23057971a8bfSPeter Brune   Level: advanced
23067971a8bfSPeter Brune 
23071cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetFunction()`, `SNESSetPicard()`, `SNESGetFunction()`, `SNESGetJacobian()`, `SNESGetDM()`, `SNESFunction`, `SNESJacobianFunction`
23087971a8bfSPeter Brune @*/
2309d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetPicard(SNES snes, Vec *r, PetscErrorCode (**f)(SNES, Vec, Vec, void *), Mat *Amat, Mat *Pmat, PetscErrorCode (**J)(SNES, Vec, Mat, Mat, void *), void **ctx)
2310d71ae5a4SJacob Faibussowitsch {
23117971a8bfSPeter Brune   DM dm;
23127971a8bfSPeter Brune 
23137971a8bfSPeter Brune   PetscFunctionBegin;
23147971a8bfSPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
23159566063dSJacob Faibussowitsch   PetscCall(SNESGetFunction(snes, r, NULL, NULL));
23169566063dSJacob Faibussowitsch   PetscCall(SNESGetJacobian(snes, Amat, Pmat, NULL, NULL));
23179566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
23189566063dSJacob Faibussowitsch   PetscCall(DMSNESGetPicard(dm, f, J, ctx));
23193ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
23207971a8bfSPeter Brune }
23217971a8bfSPeter Brune 
2322d25893d9SBarry Smith /*@C
2323dc4c0fb0SBarry Smith   SNESSetComputeInitialGuess - Sets a routine used to compute an initial guess for the nonlinear problem
2324d25893d9SBarry Smith 
2325c3339decSBarry Smith   Logically Collective
2326d25893d9SBarry Smith 
2327d25893d9SBarry Smith   Input Parameters:
2328f6dfbefdSBarry Smith + snes - the `SNES` context
2329d25893d9SBarry Smith . func - function evaluation routine
2330d25893d9SBarry Smith - ctx  - [optional] user-defined context for private data for the
2331dc4c0fb0SBarry Smith          function evaluation routine (may be `NULL`)
2332d25893d9SBarry Smith 
233320f4b53cSBarry Smith   Calling sequence of `func`:
233420f4b53cSBarry Smith + snes - the `SNES` solver
233520f4b53cSBarry Smith . x    - vector to put initial guess
2336d25893d9SBarry Smith - ctx  - optional user-defined function context
2337d25893d9SBarry Smith 
2338d25893d9SBarry Smith   Level: intermediate
2339d25893d9SBarry Smith 
2340420bcc1bSBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetFunction()`, `SNESGetFunction()`, `SNESComputeFunction()`, `SNESSetJacobian()`
2341d25893d9SBarry Smith @*/
23420b4db180SJacob Faibussowitsch PetscErrorCode SNESSetComputeInitialGuess(SNES snes, PetscErrorCode (*func)(SNES snes, Vec x, void *ctx), void *ctx)
2343d71ae5a4SJacob Faibussowitsch {
2344d25893d9SBarry Smith   PetscFunctionBegin;
2345d25893d9SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2346d25893d9SBarry Smith   if (func) snes->ops->computeinitialguess = func;
2347d25893d9SBarry Smith   if (ctx) snes->initialguessP = ctx;
23483ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2349d25893d9SBarry Smith }
2350d25893d9SBarry Smith 
23511096aae1SMatthew Knepley /*@C
2352dc4c0fb0SBarry Smith   SNESGetRhs - Gets the vector for solving F(x) = `rhs`. If `rhs` is not set
23531096aae1SMatthew Knepley   it assumes a zero right hand side.
23541096aae1SMatthew Knepley 
2355c3339decSBarry Smith   Logically Collective
23561096aae1SMatthew Knepley 
23571096aae1SMatthew Knepley   Input Parameter:
2358f6dfbefdSBarry Smith . snes - the `SNES` context
23591096aae1SMatthew Knepley 
23601096aae1SMatthew Knepley   Output Parameter:
2361420bcc1bSBarry Smith . rhs - the right hand side vector or `NULL` if there is no right-hand side vector
23621096aae1SMatthew Knepley 
23631096aae1SMatthew Knepley   Level: intermediate
23641096aae1SMatthew Knepley 
23651cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetSolution()`, `SNESGetFunction()`, `SNESComputeFunction()`, `SNESSetJacobian()`, `SNESSetFunction()`
23661096aae1SMatthew Knepley @*/
2367d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetRhs(SNES snes, Vec *rhs)
2368d71ae5a4SJacob Faibussowitsch {
23691096aae1SMatthew Knepley   PetscFunctionBegin;
23700700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
23714f572ea9SToby Isaac   PetscAssertPointer(rhs, 2);
237285385478SLisandro Dalcin   *rhs = snes->vec_rhs;
23733ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
23741096aae1SMatthew Knepley }
23751096aae1SMatthew Knepley 
23769b94acceSBarry Smith /*@
2377f6dfbefdSBarry Smith   SNESComputeFunction - Calls the function that has been set with `SNESSetFunction()`.
23789b94acceSBarry Smith 
2379c3339decSBarry Smith   Collective
2380c7afd0dbSLois Curfman McInnes 
23819b94acceSBarry Smith   Input Parameters:
2382f6dfbefdSBarry Smith + snes - the `SNES` context
2383c7afd0dbSLois Curfman McInnes - x    - input vector
23849b94acceSBarry Smith 
23859b94acceSBarry Smith   Output Parameter:
2386f6dfbefdSBarry Smith . y - function vector, as set by `SNESSetFunction()`
23879b94acceSBarry Smith 
2388dc4c0fb0SBarry Smith   Level: developer
2389dc4c0fb0SBarry Smith 
239000677de2SStefano Zampini   Notes:
2391f6dfbefdSBarry Smith   `SNESComputeFunction()` is typically used within nonlinear solvers
2392bbc1464cSBarry Smith   implementations, so users would not generally call this routine themselves.
239336851e7fSLois Curfman McInnes 
239400677de2SStefano Zampini   When solving for $F(x) = b$, this routine computes $y = F(x) - b$.
239500677de2SStefano Zampini 
23961cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetFunction()`, `SNESGetFunction()`, `SNESComputeMFFunction()`
23979b94acceSBarry Smith @*/
2398d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESComputeFunction(SNES snes, Vec x, Vec y)
2399d71ae5a4SJacob Faibussowitsch {
24006cab3a1bSJed Brown   DM     dm;
2401942e3340SBarry Smith   DMSNES sdm;
24029b94acceSBarry Smith 
24033a40ed3dSBarry Smith   PetscFunctionBegin;
24040700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
24050700a824SBarry Smith   PetscValidHeaderSpecific(x, VEC_CLASSID, 2);
24060700a824SBarry Smith   PetscValidHeaderSpecific(y, VEC_CLASSID, 3);
2407c9780b6fSBarry Smith   PetscCheckSameComm(snes, 1, x, 2);
2408c9780b6fSBarry Smith   PetscCheckSameComm(snes, 1, y, 3);
2409e0f629ddSJacob Faibussowitsch   PetscCall(VecValidValues_Internal(x, 2, PETSC_TRUE));
2410184914b5SBarry Smith 
24119566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
24129566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &sdm));
24130fdf79fbSJacob Faibussowitsch   PetscCheck(sdm->ops->computefunction || snes->vec_rhs, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Must call SNESSetFunction() or SNESSetDM() before SNESComputeFunction(), likely called from SNESSolve().");
241432f3f7c2SPeter Brune   if (sdm->ops->computefunction) {
241548a46eb9SPierre Jolivet     if (sdm->ops->computefunction != SNESObjectiveComputeFunctionDefaultFD) PetscCall(PetscLogEventBegin(SNES_FunctionEval, snes, x, y, 0));
24169566063dSJacob Faibussowitsch     PetscCall(VecLockReadPush(x));
24178ddeebeaSSteve Benbow     /* ensure domainerror is false prior to computefunction evaluation (may not have been reset) */
24188ddeebeaSSteve Benbow     snes->domainerror = PETSC_FALSE;
2419800f99ffSJeremy L Thompson     {
2420800f99ffSJeremy L Thompson       void *ctx;
2421800f99ffSJeremy L Thompson       PetscErrorCode (*computefunction)(SNES, Vec, Vec, void *);
2422800f99ffSJeremy L Thompson       PetscCall(DMSNESGetFunction(dm, &computefunction, &ctx));
2423800f99ffSJeremy L Thompson       PetscCallBack("SNES callback function", (*computefunction)(snes, x, y, ctx));
2424800f99ffSJeremy L Thompson     }
24259566063dSJacob Faibussowitsch     PetscCall(VecLockReadPop(x));
242648a46eb9SPierre Jolivet     if (sdm->ops->computefunction != SNESObjectiveComputeFunctionDefaultFD) PetscCall(PetscLogEventEnd(SNES_FunctionEval, snes, x, y, 0));
24270fdf79fbSJacob Faibussowitsch   } else /* if (snes->vec_rhs) */ {
24289566063dSJacob Faibussowitsch     PetscCall(MatMult(snes->jacobian, x, y));
24290fdf79fbSJacob Faibussowitsch   }
24301baa6e33SBarry Smith   if (snes->vec_rhs) PetscCall(VecAXPY(y, -1.0, snes->vec_rhs));
2431ae3c334cSLois Curfman McInnes   snes->nfuncs++;
2432422a814eSBarry Smith   /*
2433422a814eSBarry Smith      domainerror might not be set on all processes; so we tag vector locally with Inf and the next inner product or norm will
2434422a814eSBarry Smith      propagate the value to all processes
2435422a814eSBarry Smith   */
24361baa6e33SBarry Smith   if (snes->domainerror) PetscCall(VecSetInf(y));
24373ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
24389b94acceSBarry Smith }
24399b94acceSBarry Smith 
2440c79ef259SPeter Brune /*@
2441f6dfbefdSBarry Smith   SNESComputeMFFunction - Calls the function that has been set with `SNESSetMFFunction()`.
2442bbc1464cSBarry Smith 
2443c3339decSBarry Smith   Collective
2444bbc1464cSBarry Smith 
2445bbc1464cSBarry Smith   Input Parameters:
2446f6dfbefdSBarry Smith + snes - the `SNES` context
2447bbc1464cSBarry Smith - x    - input vector
2448bbc1464cSBarry Smith 
2449bbc1464cSBarry Smith   Output Parameter:
2450f6dfbefdSBarry Smith . y - function vector, as set by `SNESSetMFFunction()`
2451bbc1464cSBarry Smith 
2452dc4c0fb0SBarry Smith   Level: developer
2453dc4c0fb0SBarry Smith 
2454bbc1464cSBarry Smith   Notes:
2455420bcc1bSBarry Smith   `SNESComputeMFFunction()` is used within the matrix-vector products called by the matrix created with `MatCreateSNESMF()`
2456bbc1464cSBarry Smith   so users would not generally call this routine themselves.
2457bbc1464cSBarry Smith 
2458f6dfbefdSBarry Smith   Since this function is intended for use with finite differencing it does not subtract the right hand side vector provided with `SNESSolve()`
2459f6dfbefdSBarry Smith   while `SNESComputeFunction()` does. As such, this routine cannot be used with  `MatMFFDSetBase()` with a provided F function value even if it applies the
2460f6dfbefdSBarry Smith   same function as `SNESComputeFunction()` if a `SNESSolve()` right hand side vector is use because the two functions difference would include this right hand side function.
2461bbc1464cSBarry Smith 
24621cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetFunction()`, `SNESGetFunction()`, `SNESComputeFunction()`, `MatCreateSNESMF`
2463bbc1464cSBarry Smith @*/
2464d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESComputeMFFunction(SNES snes, Vec x, Vec y)
2465d71ae5a4SJacob Faibussowitsch {
2466bbc1464cSBarry Smith   DM     dm;
2467bbc1464cSBarry Smith   DMSNES sdm;
2468bbc1464cSBarry Smith 
2469bbc1464cSBarry Smith   PetscFunctionBegin;
2470bbc1464cSBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2471bbc1464cSBarry Smith   PetscValidHeaderSpecific(x, VEC_CLASSID, 2);
2472bbc1464cSBarry Smith   PetscValidHeaderSpecific(y, VEC_CLASSID, 3);
2473bbc1464cSBarry Smith   PetscCheckSameComm(snes, 1, x, 2);
2474bbc1464cSBarry Smith   PetscCheckSameComm(snes, 1, y, 3);
2475e0f629ddSJacob Faibussowitsch   PetscCall(VecValidValues_Internal(x, 2, PETSC_TRUE));
2476bbc1464cSBarry Smith 
24779566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
24789566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &sdm));
24799566063dSJacob Faibussowitsch   PetscCall(PetscLogEventBegin(SNES_FunctionEval, snes, x, y, 0));
24809566063dSJacob Faibussowitsch   PetscCall(VecLockReadPush(x));
2481bbc1464cSBarry Smith   /* ensure domainerror is false prior to computefunction evaluation (may not have been reset) */
2482bbc1464cSBarry Smith   snes->domainerror = PETSC_FALSE;
2483792fecdfSBarry Smith   PetscCallBack("SNES callback function", (*sdm->ops->computemffunction)(snes, x, y, sdm->mffunctionctx));
24849566063dSJacob Faibussowitsch   PetscCall(VecLockReadPop(x));
24859566063dSJacob Faibussowitsch   PetscCall(PetscLogEventEnd(SNES_FunctionEval, snes, x, y, 0));
2486bbc1464cSBarry Smith   snes->nfuncs++;
2487bbc1464cSBarry Smith   /*
2488bbc1464cSBarry Smith      domainerror might not be set on all processes; so we tag vector locally with Inf and the next inner product or norm will
2489bbc1464cSBarry Smith      propagate the value to all processes
2490bbc1464cSBarry Smith   */
24911baa6e33SBarry Smith   if (snes->domainerror) PetscCall(VecSetInf(y));
24923ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2493bbc1464cSBarry Smith }
2494bbc1464cSBarry Smith 
2495bbc1464cSBarry Smith /*@
2496f6dfbefdSBarry Smith   SNESComputeNGS - Calls the Gauss-Seidel function that has been set with  `SNESSetNGS()`.
2497c79ef259SPeter Brune 
2498c3339decSBarry Smith   Collective
2499c79ef259SPeter Brune 
2500c79ef259SPeter Brune   Input Parameters:
2501f6dfbefdSBarry Smith + snes - the `SNES` context
2502c79ef259SPeter Brune . x    - input vector
2503c79ef259SPeter Brune - b    - rhs vector
2504c79ef259SPeter Brune 
2505c79ef259SPeter Brune   Output Parameter:
2506c79ef259SPeter Brune . x - new solution vector
2507c79ef259SPeter Brune 
2508dc4c0fb0SBarry Smith   Level: developer
2509dc4c0fb0SBarry Smith 
2510f6dfbefdSBarry Smith   Note:
2511f6dfbefdSBarry Smith   `SNESComputeNGS()` is typically used within composed nonlinear solver
2512c79ef259SPeter Brune   implementations, so most users would not generally call this routine
2513c79ef259SPeter Brune   themselves.
2514c79ef259SPeter Brune 
25151cc06b55SBarry Smith .seealso: [](ch_snes), `SNESNGS`, `SNESSetNGS()`, `SNESComputeFunction()`
2516c79ef259SPeter Brune @*/
2517d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESComputeNGS(SNES snes, Vec b, Vec x)
2518d71ae5a4SJacob Faibussowitsch {
25196cab3a1bSJed Brown   DM     dm;
2520942e3340SBarry Smith   DMSNES sdm;
2521646217ecSPeter Brune 
2522646217ecSPeter Brune   PetscFunctionBegin;
2523646217ecSPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2524064a246eSJacob Faibussowitsch   PetscValidHeaderSpecific(x, VEC_CLASSID, 3);
2525064a246eSJacob Faibussowitsch   if (b) PetscValidHeaderSpecific(b, VEC_CLASSID, 2);
2526064a246eSJacob Faibussowitsch   PetscCheckSameComm(snes, 1, x, 3);
2527064a246eSJacob Faibussowitsch   if (b) PetscCheckSameComm(snes, 1, b, 2);
2528e0f629ddSJacob Faibussowitsch   if (b) PetscCall(VecValidValues_Internal(b, 2, PETSC_TRUE));
25299566063dSJacob Faibussowitsch   PetscCall(PetscLogEventBegin(SNES_NGSEval, snes, x, b, 0));
25309566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
25319566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &sdm));
25320fdf79fbSJacob Faibussowitsch   PetscCheck(sdm->ops->computegs, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Must call SNESSetNGS() before SNESComputeNGS(), likely called from SNESSolve().");
25339566063dSJacob Faibussowitsch   if (b) PetscCall(VecLockReadPush(b));
2534792fecdfSBarry Smith   PetscCallBack("SNES callback NGS", (*sdm->ops->computegs)(snes, x, b, sdm->gsctx));
25359566063dSJacob Faibussowitsch   if (b) PetscCall(VecLockReadPop(b));
25369566063dSJacob Faibussowitsch   PetscCall(PetscLogEventEnd(SNES_NGSEval, snes, x, b, 0));
25373ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2538646217ecSPeter Brune }
2539646217ecSPeter Brune 
2540d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESTestJacobian(SNES snes)
2541d71ae5a4SJacob Faibussowitsch {
254212837594SBarry Smith   Mat               A, B, C, D, jacobian;
2543e885f1abSBarry Smith   Vec               x = snes->vec_sol, f = snes->vec_func;
2544e885f1abSBarry Smith   PetscReal         nrm, gnorm;
254581e7118cSBarry Smith   PetscReal         threshold = 1.e-5;
25460e276705SLisandro Dalcin   MatType           mattype;
2547e885f1abSBarry Smith   PetscInt          m, n, M, N;
2548e885f1abSBarry Smith   void             *functx;
25492cd624f9SStefano Zampini   PetscBool         complete_print = PETSC_FALSE, threshold_print = PETSC_FALSE, test = PETSC_FALSE, flg, istranspose;
25503325ff46SBarry Smith   PetscViewer       viewer, mviewer;
2551e885f1abSBarry Smith   MPI_Comm          comm;
2552e885f1abSBarry Smith   PetscInt          tabs;
255312837594SBarry Smith   static PetscBool  directionsprinted = PETSC_FALSE;
25543325ff46SBarry Smith   PetscViewerFormat format;
2555e885f1abSBarry Smith 
2556e885f1abSBarry Smith   PetscFunctionBegin;
2557d0609cedSBarry Smith   PetscObjectOptionsBegin((PetscObject)snes);
25589566063dSJacob Faibussowitsch   PetscCall(PetscOptionsName("-snes_test_jacobian", "Compare hand-coded and finite difference Jacobians", "None", &test));
25599566063dSJacob Faibussowitsch   PetscCall(PetscOptionsReal("-snes_test_jacobian", "Threshold for element difference between hand-coded and finite difference being meaningful", "None", threshold, &threshold, NULL));
25609566063dSJacob Faibussowitsch   PetscCall(PetscOptionsDeprecated("-snes_test_jacobian_display", "-snes_test_jacobian_view", "3.13", NULL));
25614ead3382SBarry Smith   PetscCall(PetscOptionsViewer("-snes_test_jacobian_view", "View difference between hand-coded and finite difference Jacobians element entries", "None", &mviewer, &format, &complete_print));
25629566063dSJacob Faibussowitsch   PetscCall(PetscOptionsDeprecated("-snes_test_jacobian_display_threshold", "-snes_test_jacobian", "3.13", "-snes_test_jacobian accepts an optional threshold (since v3.10)"));
25634ead3382SBarry Smith   /* Cannot remove the what otherwise would be redundant call to (PetscOptionsReal("-snes_test_jacobian_display_threshold") below because its usage is different than the replacement usage */
25649566063dSJacob Faibussowitsch   PetscCall(PetscOptionsReal("-snes_test_jacobian_display_threshold", "Display difference between hand-coded and finite difference Jacobians which exceed input threshold", "None", threshold, &threshold, &threshold_print));
2565d0609cedSBarry Smith   PetscOptionsEnd();
25663ba16761SJacob Faibussowitsch   if (!test) PetscFunctionReturn(PETSC_SUCCESS);
2567e885f1abSBarry Smith 
25689566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)snes, &comm));
25699566063dSJacob Faibussowitsch   PetscCall(PetscViewerASCIIGetStdout(comm, &viewer));
25709566063dSJacob Faibussowitsch   PetscCall(PetscViewerASCIIGetTab(viewer, &tabs));
25719566063dSJacob Faibussowitsch   PetscCall(PetscViewerASCIISetTab(viewer, ((PetscObject)snes)->tablevel));
25729566063dSJacob Faibussowitsch   PetscCall(PetscViewerASCIIPrintf(viewer, "  ---------- Testing Jacobian -------------\n"));
257312837594SBarry Smith   if (!complete_print && !directionsprinted) {
25749566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "  Run with -snes_test_jacobian_view and optionally -snes_test_jacobian <threshold> to show difference\n"));
25759566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "    of hand-coded and finite difference Jacobian entries greater than <threshold>.\n"));
257612837594SBarry Smith   }
257712837594SBarry Smith   if (!directionsprinted) {
25789566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "  Testing hand-coded Jacobian, if (for double precision runs) ||J - Jfd||_F/||J||_F is\n"));
25799566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "    O(1.e-8), the hand-coded Jacobian is probably correct.\n"));
258012837594SBarry Smith     directionsprinted = PETSC_TRUE;
2581e885f1abSBarry Smith   }
25821baa6e33SBarry Smith   if (complete_print) PetscCall(PetscViewerPushFormat(mviewer, format));
2583e885f1abSBarry Smith 
25849566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)snes->jacobian, MATMFFD, &flg));
258512837594SBarry Smith   if (!flg) jacobian = snes->jacobian;
258612837594SBarry Smith   else jacobian = snes->jacobian_pre;
258712837594SBarry Smith 
2588a82339d0SMatthew G. Knepley   if (!x) {
25899566063dSJacob Faibussowitsch     PetscCall(MatCreateVecs(jacobian, &x, NULL));
2590a82339d0SMatthew G. Knepley   } else {
25919566063dSJacob Faibussowitsch     PetscCall(PetscObjectReference((PetscObject)x));
2592a82339d0SMatthew G. Knepley   }
2593a82339d0SMatthew G. Knepley   if (!f) {
25949566063dSJacob Faibussowitsch     PetscCall(VecDuplicate(x, &f));
2595a82339d0SMatthew G. Knepley   } else {
25969566063dSJacob Faibussowitsch     PetscCall(PetscObjectReference((PetscObject)f));
2597a82339d0SMatthew G. Knepley   }
2598a82339d0SMatthew G. Knepley   /* evaluate the function at this point because SNESComputeJacobianDefault() assumes that the function has been evaluated and put into snes->vec_func */
25999566063dSJacob Faibussowitsch   PetscCall(SNESComputeFunction(snes, x, f));
26009566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&f));
26019566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)snes, SNESKSPTRANSPOSEONLY, &istranspose));
260212837594SBarry Smith   while (jacobian) {
26032cd624f9SStefano Zampini     Mat JT = NULL, Jsave = NULL;
26042cd624f9SStefano Zampini 
26052cd624f9SStefano Zampini     if (istranspose) {
26069566063dSJacob Faibussowitsch       PetscCall(MatCreateTranspose(jacobian, &JT));
26072cd624f9SStefano Zampini       Jsave    = jacobian;
26082cd624f9SStefano Zampini       jacobian = JT;
26092cd624f9SStefano Zampini     }
26109566063dSJacob Faibussowitsch     PetscCall(PetscObjectBaseTypeCompareAny((PetscObject)jacobian, &flg, MATSEQAIJ, MATMPIAIJ, MATSEQDENSE, MATMPIDENSE, MATSEQBAIJ, MATMPIBAIJ, MATSEQSBAIJ, MATMPISBAIJ, ""));
261112837594SBarry Smith     if (flg) {
261212837594SBarry Smith       A = jacobian;
26139566063dSJacob Faibussowitsch       PetscCall(PetscObjectReference((PetscObject)A));
261412837594SBarry Smith     } else {
26159566063dSJacob Faibussowitsch       PetscCall(MatComputeOperator(jacobian, MATAIJ, &A));
261612837594SBarry Smith     }
2617e885f1abSBarry Smith 
26189566063dSJacob Faibussowitsch     PetscCall(MatGetType(A, &mattype));
26199566063dSJacob Faibussowitsch     PetscCall(MatGetSize(A, &M, &N));
26209566063dSJacob Faibussowitsch     PetscCall(MatGetLocalSize(A, &m, &n));
26219566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B));
26229566063dSJacob Faibussowitsch     PetscCall(MatSetType(B, mattype));
26239566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(B, m, n, M, N));
26249566063dSJacob Faibussowitsch     PetscCall(MatSetBlockSizesFromMats(B, A, A));
26259566063dSJacob Faibussowitsch     PetscCall(MatSetUp(B));
26269566063dSJacob Faibussowitsch     PetscCall(MatSetOption(B, MAT_NEW_NONZERO_ALLOCATION_ERR, PETSC_FALSE));
2627e885f1abSBarry Smith 
26289566063dSJacob Faibussowitsch     PetscCall(SNESGetFunction(snes, NULL, NULL, &functx));
26299566063dSJacob Faibussowitsch     PetscCall(SNESComputeJacobianDefault(snes, x, B, B, functx));
263012837594SBarry Smith 
26319566063dSJacob Faibussowitsch     PetscCall(MatDuplicate(B, MAT_COPY_VALUES, &D));
26329566063dSJacob Faibussowitsch     PetscCall(MatAYPX(D, -1.0, A, DIFFERENT_NONZERO_PATTERN));
26339566063dSJacob Faibussowitsch     PetscCall(MatNorm(D, NORM_FROBENIUS, &nrm));
26349566063dSJacob Faibussowitsch     PetscCall(MatNorm(A, NORM_FROBENIUS, &gnorm));
26359566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&D));
263612837594SBarry Smith     if (!gnorm) gnorm = 1; /* just in case */
26379566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "  ||J - Jfd||_F/||J||_F = %g, ||J - Jfd||_F = %g\n", (double)(nrm / gnorm), (double)nrm));
263812837594SBarry Smith 
2639e885f1abSBarry Smith     if (complete_print) {
26409566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Hand-coded Jacobian ----------\n"));
26419566063dSJacob Faibussowitsch       PetscCall(MatView(A, mviewer));
26429566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Finite difference Jacobian ----------\n"));
26439566063dSJacob Faibussowitsch       PetscCall(MatView(B, mviewer));
2644e885f1abSBarry Smith     }
2645e885f1abSBarry Smith 
2646df10fb39SFande Kong     if (threshold_print || complete_print) {
2647e885f1abSBarry Smith       PetscInt           Istart, Iend, *ccols, bncols, cncols, j, row;
2648e885f1abSBarry Smith       PetscScalar       *cvals;
2649e885f1abSBarry Smith       const PetscInt    *bcols;
2650e885f1abSBarry Smith       const PetscScalar *bvals;
2651e885f1abSBarry Smith 
26529566063dSJacob Faibussowitsch       PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &C));
26539566063dSJacob Faibussowitsch       PetscCall(MatSetType(C, mattype));
26549566063dSJacob Faibussowitsch       PetscCall(MatSetSizes(C, m, n, M, N));
26559566063dSJacob Faibussowitsch       PetscCall(MatSetBlockSizesFromMats(C, A, A));
26569566063dSJacob Faibussowitsch       PetscCall(MatSetUp(C));
26579566063dSJacob Faibussowitsch       PetscCall(MatSetOption(C, MAT_NEW_NONZERO_ALLOCATION_ERR, PETSC_FALSE));
26580e276705SLisandro Dalcin 
26599566063dSJacob Faibussowitsch       PetscCall(MatAYPX(B, -1.0, A, DIFFERENT_NONZERO_PATTERN));
26609566063dSJacob Faibussowitsch       PetscCall(MatGetOwnershipRange(B, &Istart, &Iend));
2661e885f1abSBarry Smith 
2662e885f1abSBarry Smith       for (row = Istart; row < Iend; row++) {
26639566063dSJacob Faibussowitsch         PetscCall(MatGetRow(B, row, &bncols, &bcols, &bvals));
26649566063dSJacob Faibussowitsch         PetscCall(PetscMalloc2(bncols, &ccols, bncols, &cvals));
2665e885f1abSBarry Smith         for (j = 0, cncols = 0; j < bncols; j++) {
266623a52b1dSBarry Smith           if (PetscAbsScalar(bvals[j]) > threshold) {
2667e885f1abSBarry Smith             ccols[cncols] = bcols[j];
2668e885f1abSBarry Smith             cvals[cncols] = bvals[j];
2669e885f1abSBarry Smith             cncols += 1;
2670e885f1abSBarry Smith           }
2671e885f1abSBarry Smith         }
267248a46eb9SPierre Jolivet         if (cncols) PetscCall(MatSetValues(C, 1, &row, cncols, ccols, cvals, INSERT_VALUES));
26739566063dSJacob Faibussowitsch         PetscCall(MatRestoreRow(B, row, &bncols, &bcols, &bvals));
26749566063dSJacob Faibussowitsch         PetscCall(PetscFree2(ccols, cvals));
2675e885f1abSBarry Smith       }
26769566063dSJacob Faibussowitsch       PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY));
26779566063dSJacob Faibussowitsch       PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY));
26789566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Hand-coded minus finite-difference Jacobian with tolerance %g ----------\n", (double)threshold));
26799566063dSJacob Faibussowitsch       PetscCall(MatView(C, complete_print ? mviewer : viewer));
26809566063dSJacob Faibussowitsch       PetscCall(MatDestroy(&C));
2681e885f1abSBarry Smith     }
26829566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&A));
26839566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&B));
26849566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&JT));
26852cd624f9SStefano Zampini     if (Jsave) jacobian = Jsave;
268612837594SBarry Smith     if (jacobian != snes->jacobian_pre) {
268712837594SBarry Smith       jacobian = snes->jacobian_pre;
26889566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  ---------- Testing Jacobian for preconditioner -------------\n"));
26899371c9d4SSatish Balay     } else jacobian = NULL;
269012837594SBarry Smith   }
26919566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&x));
26921baa6e33SBarry Smith   if (complete_print) PetscCall(PetscViewerPopFormat(mviewer));
26939566063dSJacob Faibussowitsch   if (mviewer) PetscCall(PetscViewerDestroy(&mviewer));
26949566063dSJacob Faibussowitsch   PetscCall(PetscViewerASCIISetTab(viewer, tabs));
26953ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2696e885f1abSBarry Smith }
2697e885f1abSBarry Smith 
269862fef451SLois Curfman McInnes /*@
2699f6dfbefdSBarry Smith   SNESComputeJacobian - Computes the Jacobian matrix that has been set with `SNESSetJacobian()`.
270062fef451SLois Curfman McInnes 
2701c3339decSBarry Smith   Collective
2702c7afd0dbSLois Curfman McInnes 
270362fef451SLois Curfman McInnes   Input Parameters:
2704f6dfbefdSBarry Smith + snes - the `SNES` context
2705e4094ef1SJacob Faibussowitsch - X    - input vector
270662fef451SLois Curfman McInnes 
270762fef451SLois Curfman McInnes   Output Parameters:
2708c7afd0dbSLois Curfman McInnes + A - Jacobian matrix
2709420bcc1bSBarry Smith - B - optional matrix for building the preconditioner, usually the same as `A`
2710fee21e36SBarry Smith 
2711e35cf81dSBarry Smith   Options Database Keys:
271267b8a455SSatish Balay + -snes_lag_preconditioner <lag>           - how often to rebuild preconditioner
271367b8a455SSatish Balay . -snes_lag_jacobian <lag>                 - how often to rebuild Jacobian
2714455a5933SJed Brown . -snes_test_jacobian <optional threshold> - compare the user provided Jacobian with one compute via finite differences to check for errors.  If a threshold is given, display only those entries whose difference is greater than the threshold.
2715455a5933SJed Brown . -snes_test_jacobian_view                 - display the user provided Jacobian, the finite difference Jacobian and the difference between them to help users detect the location of errors in the user provided Jacobian
2716693365a8SJed Brown . -snes_compare_explicit                   - Compare the computed Jacobian to the finite difference Jacobian and output the differences
2717693365a8SJed Brown . -snes_compare_explicit_draw              - Compare the computed Jacobian to the finite difference Jacobian and draw the result
2718693365a8SJed Brown . -snes_compare_explicit_contour           - Compare the computed Jacobian to the finite difference Jacobian and draw a contour plot with the result
27194c30e9fbSJed Brown . -snes_compare_operator                   - Make the comparison options above use the operator instead of the preconditioning matrix
272094d6a431SBarry Smith . -snes_compare_coloring                   - Compute the finite difference Jacobian using coloring and display norms of difference
2721a5b23f4aSJose E. Roman . -snes_compare_coloring_display           - Compute the finite difference Jacobian using coloring and display verbose differences
2722c01495d3SJed Brown . -snes_compare_coloring_threshold         - Display only those matrix entries that differ by more than a given threshold
2723dc4c0fb0SBarry Smith . -snes_compare_coloring_threshold_atol    - Absolute tolerance for difference in matrix entries to be displayed by `-snes_compare_coloring_threshold`
2724dc4c0fb0SBarry Smith . -snes_compare_coloring_threshold_rtol    - Relative tolerance for difference in matrix entries to be displayed by `-snes_compare_coloring_threshold`
2725a5b23f4aSJose E. Roman . -snes_compare_coloring_draw              - Compute the finite difference Jacobian using coloring and draw differences
2726a5b23f4aSJose E. Roman - -snes_compare_coloring_draw_contour      - Compute the finite difference Jacobian using coloring and show contours of matrices and differences
2727c01495d3SJed Brown 
2728dc4c0fb0SBarry Smith   Level: developer
2729dc4c0fb0SBarry Smith 
2730f6dfbefdSBarry Smith   Note:
273162fef451SLois Curfman McInnes   Most users should not need to explicitly call this routine, as it
273262fef451SLois Curfman McInnes   is used internally within the nonlinear solvers.
273362fef451SLois Curfman McInnes 
2734420bcc1bSBarry Smith   Developer Note:
2735dc4c0fb0SBarry Smith   This has duplicative ways of checking the accuracy of the user provided Jacobian (see the options above). This is for historical reasons, the routine `SNESTestJacobian()` use to used
2736420bcc1bSBarry Smith   with the `SNESType` of test that has been removed.
2737e885f1abSBarry Smith 
27381cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetJacobian()`, `KSPSetOperators()`, `MatStructure`, `SNESSetLagPreconditioner()`, `SNESSetLagJacobian()`
273962fef451SLois Curfman McInnes @*/
2740d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESComputeJacobian(SNES snes, Vec X, Mat A, Mat B)
2741d71ae5a4SJacob Faibussowitsch {
2742ace3abfcSBarry Smith   PetscBool flag;
27436cab3a1bSJed Brown   DM        dm;
2744942e3340SBarry Smith   DMSNES    sdm;
2745e0e3a89bSBarry Smith   KSP       ksp;
27463a40ed3dSBarry Smith 
27473a40ed3dSBarry Smith   PetscFunctionBegin;
27480700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
27490700a824SBarry Smith   PetscValidHeaderSpecific(X, VEC_CLASSID, 2);
2750c9780b6fSBarry Smith   PetscCheckSameComm(snes, 1, X, 2);
2751e0f629ddSJacob Faibussowitsch   PetscCall(VecValidValues_Internal(X, 2, PETSC_TRUE));
27529566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
27539566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &sdm));
27543232da50SPeter Brune 
275501c1178eSBarry Smith   /* make sure that MatAssemblyBegin/End() is called on A matrix if it is matrix-free */
2756fe3ffe1eSBarry Smith   if (snes->lagjacobian == -2) {
2757fe3ffe1eSBarry Smith     snes->lagjacobian = -1;
2758f5af7f23SKarl Rupp 
27599566063dSJacob Faibussowitsch     PetscCall(PetscInfo(snes, "Recomputing Jacobian/preconditioner because lag is -2 (means compute Jacobian, but then never again) \n"));
2760fe3ffe1eSBarry Smith   } else if (snes->lagjacobian == -1) {
27619566063dSJacob Faibussowitsch     PetscCall(PetscInfo(snes, "Reusing Jacobian/preconditioner because lag is -1\n"));
27629566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMFFD, &flag));
2763ebd3b9afSBarry Smith     if (flag) {
27649566063dSJacob Faibussowitsch       PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY));
27659566063dSJacob Faibussowitsch       PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY));
2766ebd3b9afSBarry Smith     }
27673ba16761SJacob Faibussowitsch     PetscFunctionReturn(PETSC_SUCCESS);
276837ec4e1aSPeter Brune   } else if (snes->lagjacobian > 1 && (snes->iter + snes->jac_iter) % snes->lagjacobian) {
276963a3b9bcSJacob Faibussowitsch     PetscCall(PetscInfo(snes, "Reusing Jacobian/preconditioner because lag is %" PetscInt_FMT " and SNES iteration is %" PetscInt_FMT "\n", snes->lagjacobian, snes->iter));
27709566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMFFD, &flag));
2771ebd3b9afSBarry Smith     if (flag) {
27729566063dSJacob Faibussowitsch       PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY));
27739566063dSJacob Faibussowitsch       PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY));
2774ebd3b9afSBarry Smith     }
27753ba16761SJacob Faibussowitsch     PetscFunctionReturn(PETSC_SUCCESS);
2776e35cf81dSBarry Smith   }
2777efd4aadfSBarry Smith   if (snes->npc && snes->npcside == PC_LEFT) {
27789566063dSJacob Faibussowitsch     PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY));
27799566063dSJacob Faibussowitsch     PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY));
27803ba16761SJacob Faibussowitsch     PetscFunctionReturn(PETSC_SUCCESS);
2781d728fb7dSPeter Brune   }
2782e35cf81dSBarry Smith 
27839566063dSJacob Faibussowitsch   PetscCall(PetscLogEventBegin(SNES_JacobianEval, snes, X, A, B));
27849566063dSJacob Faibussowitsch   PetscCall(VecLockReadPush(X));
2785800f99ffSJeremy L Thompson   {
2786800f99ffSJeremy L Thompson     void *ctx;
2787800f99ffSJeremy L Thompson     PetscErrorCode (*J)(SNES, Vec, Mat, Mat, void *);
2788800f99ffSJeremy L Thompson     PetscCall(DMSNESGetJacobian(dm, &J, &ctx));
2789800f99ffSJeremy L Thompson     PetscCallBack("SNES callback Jacobian", (*J)(snes, X, A, B, ctx));
2790800f99ffSJeremy L Thompson   }
27919566063dSJacob Faibussowitsch   PetscCall(VecLockReadPop(X));
27929566063dSJacob Faibussowitsch   PetscCall(PetscLogEventEnd(SNES_JacobianEval, snes, X, A, B));
279328d58a37SPierre Jolivet 
279428d58a37SPierre Jolivet   /* attach latest linearization point to the preconditioning matrix */
27959566063dSJacob Faibussowitsch   PetscCall(PetscObjectCompose((PetscObject)B, "__SNES_latest_X", (PetscObject)X));
2796a8054027SBarry Smith 
2797e0e3a89bSBarry Smith   /* the next line ensures that snes->ksp exists */
27989566063dSJacob Faibussowitsch   PetscCall(SNESGetKSP(snes, &ksp));
27993b4f5425SBarry Smith   if (snes->lagpreconditioner == -2) {
28009566063dSJacob Faibussowitsch     PetscCall(PetscInfo(snes, "Rebuilding preconditioner exactly once since lag is -2\n"));
28019566063dSJacob Faibussowitsch     PetscCall(KSPSetReusePreconditioner(snes->ksp, PETSC_FALSE));
28023b4f5425SBarry Smith     snes->lagpreconditioner = -1;
28033b4f5425SBarry Smith   } else if (snes->lagpreconditioner == -1) {
28049566063dSJacob Faibussowitsch     PetscCall(PetscInfo(snes, "Reusing preconditioner because lag is -1\n"));
28059566063dSJacob Faibussowitsch     PetscCall(KSPSetReusePreconditioner(snes->ksp, PETSC_TRUE));
280637ec4e1aSPeter Brune   } else if (snes->lagpreconditioner > 1 && (snes->iter + snes->pre_iter) % snes->lagpreconditioner) {
280763a3b9bcSJacob Faibussowitsch     PetscCall(PetscInfo(snes, "Reusing preconditioner because lag is %" PetscInt_FMT " and SNES iteration is %" PetscInt_FMT "\n", snes->lagpreconditioner, snes->iter));
28089566063dSJacob Faibussowitsch     PetscCall(KSPSetReusePreconditioner(snes->ksp, PETSC_TRUE));
2809d1e9a80fSBarry Smith   } else {
28109566063dSJacob Faibussowitsch     PetscCall(PetscInfo(snes, "Rebuilding preconditioner\n"));
28119566063dSJacob Faibussowitsch     PetscCall(KSPSetReusePreconditioner(snes->ksp, PETSC_FALSE));
2812a8054027SBarry Smith   }
2813a8054027SBarry Smith 
28149566063dSJacob Faibussowitsch   PetscCall(SNESTestJacobian(snes));
28156d84be18SBarry Smith   /* make sure user returned a correct Jacobian and preconditioner */
281694ab13aaSBarry Smith   /* PetscValidHeaderSpecific(A,MAT_CLASSID,3);
281794ab13aaSBarry Smith     PetscValidHeaderSpecific(B,MAT_CLASSID,4);   */
2818693365a8SJed Brown   {
2819693365a8SJed Brown     PetscBool flag = PETSC_FALSE, flag_draw = PETSC_FALSE, flag_contour = PETSC_FALSE, flag_operator = PETSC_FALSE;
28209566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_explicit", NULL, NULL, &flag));
28219566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_explicit_draw", NULL, NULL, &flag_draw));
28229566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_explicit_draw_contour", NULL, NULL, &flag_contour));
28239566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_operator", NULL, NULL, &flag_operator));
2824693365a8SJed Brown     if (flag || flag_draw || flag_contour) {
28250298fd71SBarry Smith       Mat         Bexp_mine = NULL, Bexp, FDexp;
2826693365a8SJed Brown       PetscViewer vdraw, vstdout;
28276b3a5b13SJed Brown       PetscBool   flg;
2828693365a8SJed Brown       if (flag_operator) {
28299566063dSJacob Faibussowitsch         PetscCall(MatComputeOperator(A, MATAIJ, &Bexp_mine));
2830693365a8SJed Brown         Bexp = Bexp_mine;
2831693365a8SJed Brown       } else {
2832693365a8SJed Brown         /* See if the preconditioning matrix can be viewed and added directly */
28339566063dSJacob Faibussowitsch         PetscCall(PetscObjectBaseTypeCompareAny((PetscObject)B, &flg, MATSEQAIJ, MATMPIAIJ, MATSEQDENSE, MATMPIDENSE, MATSEQBAIJ, MATMPIBAIJ, MATSEQSBAIJ, MATMPIBAIJ, ""));
283494ab13aaSBarry Smith         if (flg) Bexp = B;
2835693365a8SJed Brown         else {
2836693365a8SJed Brown           /* If the "preconditioning" matrix is itself MATSHELL or some other type without direct support */
28379566063dSJacob Faibussowitsch           PetscCall(MatComputeOperator(B, MATAIJ, &Bexp_mine));
2838693365a8SJed Brown           Bexp = Bexp_mine;
2839693365a8SJed Brown         }
2840693365a8SJed Brown       }
28419566063dSJacob Faibussowitsch       PetscCall(MatConvert(Bexp, MATSAME, MAT_INITIAL_MATRIX, &FDexp));
28429566063dSJacob Faibussowitsch       PetscCall(SNESComputeJacobianDefault(snes, X, FDexp, FDexp, NULL));
28439566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)snes), &vstdout));
2844693365a8SJed Brown       if (flag_draw || flag_contour) {
28459566063dSJacob Faibussowitsch         PetscCall(PetscViewerDrawOpen(PetscObjectComm((PetscObject)snes), NULL, "Explicit Jacobians", PETSC_DECIDE, PETSC_DECIDE, 300, 300, &vdraw));
28469566063dSJacob Faibussowitsch         if (flag_contour) PetscCall(PetscViewerPushFormat(vdraw, PETSC_VIEWER_DRAW_CONTOUR));
28470298fd71SBarry Smith       } else vdraw = NULL;
28489566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(vstdout, "Explicit %s\n", flag_operator ? "Jacobian" : "preconditioning Jacobian"));
28499566063dSJacob Faibussowitsch       if (flag) PetscCall(MatView(Bexp, vstdout));
28509566063dSJacob Faibussowitsch       if (vdraw) PetscCall(MatView(Bexp, vdraw));
28519566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(vstdout, "Finite difference Jacobian\n"));
28529566063dSJacob Faibussowitsch       if (flag) PetscCall(MatView(FDexp, vstdout));
28539566063dSJacob Faibussowitsch       if (vdraw) PetscCall(MatView(FDexp, vdraw));
28549566063dSJacob Faibussowitsch       PetscCall(MatAYPX(FDexp, -1.0, Bexp, SAME_NONZERO_PATTERN));
28559566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(vstdout, "User-provided matrix minus finite difference Jacobian\n"));
28569566063dSJacob Faibussowitsch       if (flag) PetscCall(MatView(FDexp, vstdout));
2857693365a8SJed Brown       if (vdraw) { /* Always use contour for the difference */
28589566063dSJacob Faibussowitsch         PetscCall(PetscViewerPushFormat(vdraw, PETSC_VIEWER_DRAW_CONTOUR));
28599566063dSJacob Faibussowitsch         PetscCall(MatView(FDexp, vdraw));
28609566063dSJacob Faibussowitsch         PetscCall(PetscViewerPopFormat(vdraw));
2861693365a8SJed Brown       }
28629566063dSJacob Faibussowitsch       if (flag_contour) PetscCall(PetscViewerPopFormat(vdraw));
28639566063dSJacob Faibussowitsch       PetscCall(PetscViewerDestroy(&vdraw));
28649566063dSJacob Faibussowitsch       PetscCall(MatDestroy(&Bexp_mine));
28659566063dSJacob Faibussowitsch       PetscCall(MatDestroy(&FDexp));
2866693365a8SJed Brown     }
2867693365a8SJed Brown   }
28684c30e9fbSJed Brown   {
28696719d8e4SJed Brown     PetscBool flag = PETSC_FALSE, flag_display = PETSC_FALSE, flag_draw = PETSC_FALSE, flag_contour = PETSC_FALSE, flag_threshold = PETSC_FALSE;
28706719d8e4SJed Brown     PetscReal threshold_atol = PETSC_SQRT_MACHINE_EPSILON, threshold_rtol = 10 * PETSC_SQRT_MACHINE_EPSILON;
28719566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring", NULL, NULL, &flag));
28729566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring_display", NULL, NULL, &flag_display));
28739566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring_draw", NULL, NULL, &flag_draw));
28749566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring_draw_contour", NULL, NULL, &flag_contour));
28759566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring_threshold", NULL, NULL, &flag_threshold));
287627b0f280SBarry Smith     if (flag_threshold) {
28779566063dSJacob Faibussowitsch       PetscCall(PetscOptionsGetReal(((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring_threshold_rtol", &threshold_rtol, NULL));
28789566063dSJacob Faibussowitsch       PetscCall(PetscOptionsGetReal(((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring_threshold_atol", &threshold_atol, NULL));
287927b0f280SBarry Smith     }
28806719d8e4SJed Brown     if (flag || flag_display || flag_draw || flag_contour || flag_threshold) {
28814c30e9fbSJed Brown       Mat           Bfd;
28824c30e9fbSJed Brown       PetscViewer   vdraw, vstdout;
2883335efc43SPeter Brune       MatColoring   coloring;
28844c30e9fbSJed Brown       ISColoring    iscoloring;
28854c30e9fbSJed Brown       MatFDColoring matfdcoloring;
28864c30e9fbSJed Brown       PetscErrorCode (*func)(SNES, Vec, Vec, void *);
28874c30e9fbSJed Brown       void     *funcctx;
28886719d8e4SJed Brown       PetscReal norm1, norm2, normmax;
28894c30e9fbSJed Brown 
28909566063dSJacob Faibussowitsch       PetscCall(MatDuplicate(B, MAT_DO_NOT_COPY_VALUES, &Bfd));
28919566063dSJacob Faibussowitsch       PetscCall(MatColoringCreate(Bfd, &coloring));
28929566063dSJacob Faibussowitsch       PetscCall(MatColoringSetType(coloring, MATCOLORINGSL));
28939566063dSJacob Faibussowitsch       PetscCall(MatColoringSetFromOptions(coloring));
28949566063dSJacob Faibussowitsch       PetscCall(MatColoringApply(coloring, &iscoloring));
28959566063dSJacob Faibussowitsch       PetscCall(MatColoringDestroy(&coloring));
28969566063dSJacob Faibussowitsch       PetscCall(MatFDColoringCreate(Bfd, iscoloring, &matfdcoloring));
28979566063dSJacob Faibussowitsch       PetscCall(MatFDColoringSetFromOptions(matfdcoloring));
28989566063dSJacob Faibussowitsch       PetscCall(MatFDColoringSetUp(Bfd, iscoloring, matfdcoloring));
28999566063dSJacob Faibussowitsch       PetscCall(ISColoringDestroy(&iscoloring));
29004c30e9fbSJed Brown 
29014c30e9fbSJed Brown       /* This method of getting the function is currently unreliable since it doesn't work for DM local functions. */
29029566063dSJacob Faibussowitsch       PetscCall(SNESGetFunction(snes, NULL, &func, &funcctx));
29039566063dSJacob Faibussowitsch       PetscCall(MatFDColoringSetFunction(matfdcoloring, (PetscErrorCode(*)(void))func, funcctx));
29049566063dSJacob Faibussowitsch       PetscCall(PetscObjectSetOptionsPrefix((PetscObject)matfdcoloring, ((PetscObject)snes)->prefix));
29059566063dSJacob Faibussowitsch       PetscCall(PetscObjectAppendOptionsPrefix((PetscObject)matfdcoloring, "coloring_"));
29069566063dSJacob Faibussowitsch       PetscCall(MatFDColoringSetFromOptions(matfdcoloring));
29079566063dSJacob Faibussowitsch       PetscCall(MatFDColoringApply(Bfd, matfdcoloring, X, snes));
29089566063dSJacob Faibussowitsch       PetscCall(MatFDColoringDestroy(&matfdcoloring));
29094c30e9fbSJed Brown 
29109566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)snes), &vstdout));
29114c30e9fbSJed Brown       if (flag_draw || flag_contour) {
29129566063dSJacob Faibussowitsch         PetscCall(PetscViewerDrawOpen(PetscObjectComm((PetscObject)snes), NULL, "Colored Jacobians", PETSC_DECIDE, PETSC_DECIDE, 300, 300, &vdraw));
29139566063dSJacob Faibussowitsch         if (flag_contour) PetscCall(PetscViewerPushFormat(vdraw, PETSC_VIEWER_DRAW_CONTOUR));
29140298fd71SBarry Smith       } else vdraw = NULL;
29159566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(vstdout, "Explicit preconditioning Jacobian\n"));
29169566063dSJacob Faibussowitsch       if (flag_display) PetscCall(MatView(B, vstdout));
29179566063dSJacob Faibussowitsch       if (vdraw) PetscCall(MatView(B, vdraw));
29189566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(vstdout, "Colored Finite difference Jacobian\n"));
29199566063dSJacob Faibussowitsch       if (flag_display) PetscCall(MatView(Bfd, vstdout));
29209566063dSJacob Faibussowitsch       if (vdraw) PetscCall(MatView(Bfd, vdraw));
29219566063dSJacob Faibussowitsch       PetscCall(MatAYPX(Bfd, -1.0, B, SAME_NONZERO_PATTERN));
29229566063dSJacob Faibussowitsch       PetscCall(MatNorm(Bfd, NORM_1, &norm1));
29239566063dSJacob Faibussowitsch       PetscCall(MatNorm(Bfd, NORM_FROBENIUS, &norm2));
29249566063dSJacob Faibussowitsch       PetscCall(MatNorm(Bfd, NORM_MAX, &normmax));
29259566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(vstdout, "User-provided matrix minus finite difference Jacobian, norm1=%g normFrob=%g normmax=%g\n", (double)norm1, (double)norm2, (double)normmax));
29269566063dSJacob Faibussowitsch       if (flag_display) PetscCall(MatView(Bfd, vstdout));
29274c30e9fbSJed Brown       if (vdraw) { /* Always use contour for the difference */
29289566063dSJacob Faibussowitsch         PetscCall(PetscViewerPushFormat(vdraw, PETSC_VIEWER_DRAW_CONTOUR));
29299566063dSJacob Faibussowitsch         PetscCall(MatView(Bfd, vdraw));
29309566063dSJacob Faibussowitsch         PetscCall(PetscViewerPopFormat(vdraw));
29314c30e9fbSJed Brown       }
29329566063dSJacob Faibussowitsch       if (flag_contour) PetscCall(PetscViewerPopFormat(vdraw));
29336719d8e4SJed Brown 
29346719d8e4SJed Brown       if (flag_threshold) {
29356719d8e4SJed Brown         PetscInt bs, rstart, rend, i;
29369566063dSJacob Faibussowitsch         PetscCall(MatGetBlockSize(B, &bs));
29379566063dSJacob Faibussowitsch         PetscCall(MatGetOwnershipRange(B, &rstart, &rend));
29386719d8e4SJed Brown         for (i = rstart; i < rend; i++) {
29396719d8e4SJed Brown           const PetscScalar *ba, *ca;
29406719d8e4SJed Brown           const PetscInt    *bj, *cj;
29416719d8e4SJed Brown           PetscInt           bn, cn, j, maxentrycol = -1, maxdiffcol = -1, maxrdiffcol = -1;
29426719d8e4SJed Brown           PetscReal          maxentry = 0, maxdiff = 0, maxrdiff = 0;
29439566063dSJacob Faibussowitsch           PetscCall(MatGetRow(B, i, &bn, &bj, &ba));
29449566063dSJacob Faibussowitsch           PetscCall(MatGetRow(Bfd, i, &cn, &cj, &ca));
29455f80ce2aSJacob Faibussowitsch           PetscCheck(bn == cn, ((PetscObject)A)->comm, PETSC_ERR_PLIB, "Unexpected different nonzero pattern in -snes_compare_coloring_threshold");
29466719d8e4SJed Brown           for (j = 0; j < bn; j++) {
29476719d8e4SJed Brown             PetscReal rdiff = PetscAbsScalar(ca[j]) / (threshold_atol + threshold_rtol * PetscAbsScalar(ba[j]));
29486719d8e4SJed Brown             if (PetscAbsScalar(ba[j]) > PetscAbs(maxentry)) {
29496719d8e4SJed Brown               maxentrycol = bj[j];
29506719d8e4SJed Brown               maxentry    = PetscRealPart(ba[j]);
29516719d8e4SJed Brown             }
29526719d8e4SJed Brown             if (PetscAbsScalar(ca[j]) > PetscAbs(maxdiff)) {
29536719d8e4SJed Brown               maxdiffcol = bj[j];
29546719d8e4SJed Brown               maxdiff    = PetscRealPart(ca[j]);
29556719d8e4SJed Brown             }
29566719d8e4SJed Brown             if (rdiff > maxrdiff) {
29576719d8e4SJed Brown               maxrdiffcol = bj[j];
29586719d8e4SJed Brown               maxrdiff    = rdiff;
29596719d8e4SJed Brown             }
29606719d8e4SJed Brown           }
29616719d8e4SJed Brown           if (maxrdiff > 1) {
296263a3b9bcSJacob Faibussowitsch             PetscCall(PetscViewerASCIIPrintf(vstdout, "row %" PetscInt_FMT " (maxentry=%g at %" PetscInt_FMT ", maxdiff=%g at %" PetscInt_FMT ", maxrdiff=%g at %" PetscInt_FMT "):", i, (double)maxentry, maxentrycol, (double)maxdiff, maxdiffcol, (double)maxrdiff, maxrdiffcol));
29636719d8e4SJed Brown             for (j = 0; j < bn; j++) {
29646719d8e4SJed Brown               PetscReal rdiff;
29656719d8e4SJed Brown               rdiff = PetscAbsScalar(ca[j]) / (threshold_atol + threshold_rtol * PetscAbsScalar(ba[j]));
296648a46eb9SPierre Jolivet               if (rdiff > 1) PetscCall(PetscViewerASCIIPrintf(vstdout, " (%" PetscInt_FMT ",%g:%g)", bj[j], (double)PetscRealPart(ba[j]), (double)PetscRealPart(ca[j])));
29676719d8e4SJed Brown             }
296863a3b9bcSJacob Faibussowitsch             PetscCall(PetscViewerASCIIPrintf(vstdout, "\n"));
29696719d8e4SJed Brown           }
29709566063dSJacob Faibussowitsch           PetscCall(MatRestoreRow(B, i, &bn, &bj, &ba));
29719566063dSJacob Faibussowitsch           PetscCall(MatRestoreRow(Bfd, i, &cn, &cj, &ca));
29726719d8e4SJed Brown         }
29736719d8e4SJed Brown       }
29749566063dSJacob Faibussowitsch       PetscCall(PetscViewerDestroy(&vdraw));
29759566063dSJacob Faibussowitsch       PetscCall(MatDestroy(&Bfd));
29764c30e9fbSJed Brown     }
29774c30e9fbSJed Brown   }
29783ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
29799b94acceSBarry Smith }
29809b94acceSBarry Smith 
2981bf388a1fSBarry Smith /*MC
2982420bcc1bSBarry Smith     SNESJacobianFunction - Functional form used by `SNES` to compute the nonlinear Jacobian of the function to be solved by `SNES`
2983bf388a1fSBarry Smith 
2984bf388a1fSBarry Smith      Synopsis:
2985411c0326SBarry Smith      #include "petscsnes.h"
2986411c0326SBarry Smith      PetscErrorCode SNESJacobianFunction(SNES snes,Vec x,Mat Amat,Mat Pmat,void *ctx);
2987bf388a1fSBarry Smith 
2988c3339decSBarry Smith      Collective
29891843f636SBarry Smith 
29901843f636SBarry Smith     Input Parameters:
29911843f636SBarry Smith +  x - input vector, the Jacobian is to be computed at this value
2992bf388a1fSBarry Smith -  ctx - [optional] user-defined Jacobian context
2993bf388a1fSBarry Smith 
29941843f636SBarry Smith     Output Parameters:
29951843f636SBarry Smith +  Amat - the matrix that defines the (approximate) Jacobian
2996dc4c0fb0SBarry Smith -  Pmat - the matrix to be used in constructing the preconditioner, usually the same as `Amat`.
29971843f636SBarry Smith 
2998878cb397SSatish Balay    Level: intermediate
2999878cb397SSatish Balay 
30001cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetFunction()`, `SNESGetFunction()`, `SNESSetJacobian()`, `SNESGetJacobian()`
3001bf388a1fSBarry Smith M*/
3002bf388a1fSBarry Smith 
30039b94acceSBarry Smith /*@C
30049b94acceSBarry Smith   SNESSetJacobian - Sets the function to compute Jacobian as well as the
3005044dda88SLois Curfman McInnes   location to store the matrix.
30069b94acceSBarry Smith 
3007c3339decSBarry Smith   Logically Collective
3008c7afd0dbSLois Curfman McInnes 
30099b94acceSBarry Smith   Input Parameters:
3010f6dfbefdSBarry Smith + snes - the `SNES` context
3011e5d3d808SBarry Smith . Amat - the matrix that defines the (approximate) Jacobian
3012dc4c0fb0SBarry Smith . Pmat - the matrix to be used in constructing the preconditioner, usually the same as `Amat`.
3013dc4c0fb0SBarry Smith . J    - Jacobian evaluation routine (if `NULL` then `SNES` retains any previously set value), see `SNESJacobianFunction` for details
3014c7afd0dbSLois Curfman McInnes - ctx  - [optional] user-defined context for private data for the
3015dc4c0fb0SBarry Smith          Jacobian evaluation routine (may be `NULL`) (if `NULL` then `SNES` retains any previously set value)
3016dc4c0fb0SBarry Smith 
3017dc4c0fb0SBarry Smith   Level: beginner
30189b94acceSBarry Smith 
30199b94acceSBarry Smith   Notes:
3020dc4c0fb0SBarry Smith   If the `Amat` matrix and `Pmat` matrix are different you must call `MatAssemblyBegin()`/`MatAssemblyEnd()` on
302116913363SBarry Smith   each matrix.
302216913363SBarry Smith 
3023dc4c0fb0SBarry Smith   If you know the operator `Amat` has a null space you can use `MatSetNullSpace()` and `MatSetTransposeNullSpace()` to supply the null
3024dc4c0fb0SBarry Smith   space to `Amat` and the `KSP` solvers will automatically use that null space as needed during the solution process.
3025895c21f2SBarry Smith 
3026dc4c0fb0SBarry Smith   If using `SNESComputeJacobianDefaultColor()` to assemble a Jacobian, the `ctx` argument
3027f6dfbefdSBarry Smith   must be a `MatFDColoring`.
3028a8a26c1eSJed Brown 
3029c3cc8fd1SJed Brown   Other defect-correction schemes can be used by computing a different matrix in place of the Jacobian.  One common
3030f6dfbefdSBarry Smith   example is to use the "Picard linearization" which only differentiates through the highest order parts of each term using `SNESSetPicard()`
3031c3cc8fd1SJed Brown 
30321cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `KSPSetOperators()`, `SNESSetFunction()`, `MatMFFDComputeJacobian()`, `SNESComputeJacobianDefaultColor()`, `MatStructure`,
3033db781477SPatrick Sanan           `SNESSetPicard()`, `SNESJacobianFunction`
30349b94acceSBarry Smith @*/
3035d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetJacobian(SNES snes, Mat Amat, Mat Pmat, PetscErrorCode (*J)(SNES, Vec, Mat, Mat, void *), void *ctx)
3036d71ae5a4SJacob Faibussowitsch {
30376cab3a1bSJed Brown   DM dm;
30383a7fca6bSBarry Smith 
30393a40ed3dSBarry Smith   PetscFunctionBegin;
30400700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3041e5d3d808SBarry Smith   if (Amat) PetscValidHeaderSpecific(Amat, MAT_CLASSID, 2);
3042e5d3d808SBarry Smith   if (Pmat) PetscValidHeaderSpecific(Pmat, MAT_CLASSID, 3);
3043e5d3d808SBarry Smith   if (Amat) PetscCheckSameComm(snes, 1, Amat, 2);
3044e5d3d808SBarry Smith   if (Pmat) PetscCheckSameComm(snes, 1, Pmat, 3);
30459566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
30469566063dSJacob Faibussowitsch   PetscCall(DMSNESSetJacobian(dm, J, ctx));
3047e5d3d808SBarry Smith   if (Amat) {
30489566063dSJacob Faibussowitsch     PetscCall(PetscObjectReference((PetscObject)Amat));
30499566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&snes->jacobian));
3050f5af7f23SKarl Rupp 
3051e5d3d808SBarry Smith     snes->jacobian = Amat;
30523a7fca6bSBarry Smith   }
3053e5d3d808SBarry Smith   if (Pmat) {
30549566063dSJacob Faibussowitsch     PetscCall(PetscObjectReference((PetscObject)Pmat));
30559566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&snes->jacobian_pre));
3056f5af7f23SKarl Rupp 
3057e5d3d808SBarry Smith     snes->jacobian_pre = Pmat;
30583a7fca6bSBarry Smith   }
30593ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
30609b94acceSBarry Smith }
306162fef451SLois Curfman McInnes 
3062c2aafc4cSSatish Balay /*@C
3063b4fd4287SBarry Smith   SNESGetJacobian - Returns the Jacobian matrix and optionally the user
3064b4fd4287SBarry Smith   provided context for evaluating the Jacobian.
3065b4fd4287SBarry Smith 
3066420bcc1bSBarry Smith   Not Collective, but `Mat` object will be parallel if `SNES` is
3067c7afd0dbSLois Curfman McInnes 
3068b4fd4287SBarry Smith   Input Parameter:
3069b4fd4287SBarry Smith . snes - the nonlinear solver context
3070b4fd4287SBarry Smith 
3071b4fd4287SBarry Smith   Output Parameters:
3072dc4c0fb0SBarry Smith + Amat - location to stash (approximate) Jacobian matrix (or `NULL`)
3073dc4c0fb0SBarry Smith . Pmat - location to stash matrix used to compute the preconditioner (or `NULL`)
307420f4b53cSBarry Smith . J    - location to put Jacobian function (or `NULL`), for calling sequence see `SNESJacobianFunction`
3075dc4c0fb0SBarry Smith - ctx  - location to stash Jacobian ctx (or `NULL`)
3076fee21e36SBarry Smith 
307736851e7fSLois Curfman McInnes   Level: advanced
307836851e7fSLois Curfman McInnes 
30791cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `Mat`, `SNESSetJacobian()`, `SNESComputeJacobian()`, `SNESJacobianFunction`, `SNESGetFunction()`
3080b4fd4287SBarry Smith @*/
3081d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetJacobian(SNES snes, Mat *Amat, Mat *Pmat, PetscErrorCode (**J)(SNES, Vec, Mat, Mat, void *), void **ctx)
3082d71ae5a4SJacob Faibussowitsch {
30836cab3a1bSJed Brown   DM dm;
30846cab3a1bSJed Brown 
30853a40ed3dSBarry Smith   PetscFunctionBegin;
30860700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3087e5d3d808SBarry Smith   if (Amat) *Amat = snes->jacobian;
3088e5d3d808SBarry Smith   if (Pmat) *Pmat = snes->jacobian_pre;
30899566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
3090800f99ffSJeremy L Thompson   PetscCall(DMSNESGetJacobian(dm, J, ctx));
30913ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3092b4fd4287SBarry Smith }
3093b4fd4287SBarry Smith 
3094d71ae5a4SJacob Faibussowitsch static PetscErrorCode SNESSetDefaultComputeJacobian(SNES snes)
3095d71ae5a4SJacob Faibussowitsch {
309658b371f3SBarry Smith   DM     dm;
309758b371f3SBarry Smith   DMSNES sdm;
309858b371f3SBarry Smith 
309958b371f3SBarry Smith   PetscFunctionBegin;
31009566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
31019566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &sdm));
310258b371f3SBarry Smith   if (!sdm->ops->computejacobian && snes->jacobian_pre) {
310358b371f3SBarry Smith     DM        dm;
310458b371f3SBarry Smith     PetscBool isdense, ismf;
310558b371f3SBarry Smith 
31069566063dSJacob Faibussowitsch     PetscCall(SNESGetDM(snes, &dm));
31079566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompareAny((PetscObject)snes->jacobian_pre, &isdense, MATSEQDENSE, MATMPIDENSE, MATDENSE, NULL));
31089566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompareAny((PetscObject)snes->jacobian_pre, &ismf, MATMFFD, MATSHELL, NULL));
310958b371f3SBarry Smith     if (isdense) {
31109566063dSJacob Faibussowitsch       PetscCall(DMSNESSetJacobian(dm, SNESComputeJacobianDefault, NULL));
311158b371f3SBarry Smith     } else if (!ismf) {
31129566063dSJacob Faibussowitsch       PetscCall(DMSNESSetJacobian(dm, SNESComputeJacobianDefaultColor, NULL));
311358b371f3SBarry Smith     }
311458b371f3SBarry Smith   }
31153ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
311658b371f3SBarry Smith }
311758b371f3SBarry Smith 
31189b94acceSBarry Smith /*@
31199b94acceSBarry Smith   SNESSetUp - Sets up the internal data structures for the later use
3120272ac6f2SLois Curfman McInnes   of a nonlinear solver.
31219b94acceSBarry Smith 
3122c3339decSBarry Smith   Collective
3123fee21e36SBarry Smith 
31242fe279fdSBarry Smith   Input Parameter:
3125f6dfbefdSBarry Smith . snes - the `SNES` context
3126c7afd0dbSLois Curfman McInnes 
3127dc4c0fb0SBarry Smith   Level: advanced
3128dc4c0fb0SBarry Smith 
3129f6dfbefdSBarry Smith   Note:
3130f6dfbefdSBarry Smith   For basic use of the `SNES` solvers the user need not explicitly call
3131f6dfbefdSBarry Smith   `SNESSetUp()`, since these actions will automatically occur during
3132f6dfbefdSBarry Smith   the call to `SNESSolve()`.  However, if one wishes to control this
3133f6dfbefdSBarry Smith   phase separately, `SNESSetUp()` should be called after `SNESCreate()`
3134f6dfbefdSBarry Smith   and optional routines of the form SNESSetXXX(), but before `SNESSolve()`.
3135272ac6f2SLois Curfman McInnes 
31361cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESCreate()`, `SNESSolve()`, `SNESDestroy()`
31379b94acceSBarry Smith @*/
3138d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetUp(SNES snes)
3139d71ae5a4SJacob Faibussowitsch {
31406cab3a1bSJed Brown   DM             dm;
3141942e3340SBarry Smith   DMSNES         sdm;
3142c35f09e5SBarry Smith   SNESLineSearch linesearch, pclinesearch;
31436e2a1849SPeter Brune   void          *lsprectx, *lspostctx;
31449b5c1c08SStefano Zampini   PetscBool      mf_operator, mf;
31459b5c1c08SStefano Zampini   Vec            f, fpc;
31469b5c1c08SStefano Zampini   void          *funcctx;
31479b5c1c08SStefano Zampini   void          *jacctx, *appctx;
31489b5c1c08SStefano Zampini   Mat            j, jpre;
31496b2b7091SBarry Smith   PetscErrorCode (*precheck)(SNESLineSearch, Vec, Vec, PetscBool *, void *);
31506b2b7091SBarry Smith   PetscErrorCode (*postcheck)(SNESLineSearch, Vec, Vec, Vec, PetscBool *, PetscBool *, void *);
31516e2a1849SPeter Brune   PetscErrorCode (*func)(SNES, Vec, Vec, void *);
3152d1e9a80fSBarry Smith   PetscErrorCode (*jac)(SNES, Vec, Mat, Mat, void *);
31533a40ed3dSBarry Smith 
31543a40ed3dSBarry Smith   PetscFunctionBegin;
31550700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
31563ba16761SJacob Faibussowitsch   if (snes->setupcalled) PetscFunctionReturn(PETSC_SUCCESS);
3157fc8bc0e3SRichard Tran Mills   PetscCall(PetscLogEventBegin(SNES_SetUp, snes, 0, 0, 0));
31589b94acceSBarry Smith 
315948a46eb9SPierre Jolivet   if (!((PetscObject)snes)->type_name) PetscCall(SNESSetType(snes, SNESNEWTONLS));
316085385478SLisandro Dalcin 
31619566063dSJacob Faibussowitsch   PetscCall(SNESGetFunction(snes, &snes->vec_func, NULL, NULL));
316258c9b817SLisandro Dalcin 
31639566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
31649566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &sdm));
31659566063dSJacob Faibussowitsch   PetscCall(SNESSetDefaultComputeJacobian(snes));
316658b371f3SBarry Smith 
316748a46eb9SPierre Jolivet   if (!snes->vec_func) PetscCall(DMCreateGlobalVector(dm, &snes->vec_func));
3168efd51863SBarry Smith 
316948a46eb9SPierre Jolivet   if (!snes->ksp) PetscCall(SNESGetKSP(snes, &snes->ksp));
3170b710008aSBarry Smith 
3171d8d34be6SBarry Smith   if (snes->linesearch) {
31729566063dSJacob Faibussowitsch     PetscCall(SNESGetLineSearch(snes, &snes->linesearch));
31739566063dSJacob Faibussowitsch     PetscCall(SNESLineSearchSetFunction(snes->linesearch, SNESComputeFunction));
3174d8d34be6SBarry Smith   }
31759e764e56SPeter Brune 
31769b5c1c08SStefano Zampini   PetscCall(SNESGetUseMatrixFree(snes, &mf_operator, &mf));
3177b552625fSStefano Zampini   if (snes->npc && snes->npcside == PC_LEFT) {
3178172a4300SPeter Brune     snes->mf          = PETSC_TRUE;
3179172a4300SPeter Brune     snes->mf_operator = PETSC_FALSE;
3180172a4300SPeter Brune   }
3181d8f46077SPeter Brune 
3182efd4aadfSBarry Smith   if (snes->npc) {
31836e2a1849SPeter Brune     /* copy the DM over */
31849566063dSJacob Faibussowitsch     PetscCall(SNESGetDM(snes, &dm));
31859566063dSJacob Faibussowitsch     PetscCall(SNESSetDM(snes->npc, dm));
31866e2a1849SPeter Brune 
31879566063dSJacob Faibussowitsch     PetscCall(SNESGetFunction(snes, &f, &func, &funcctx));
31889566063dSJacob Faibussowitsch     PetscCall(VecDuplicate(f, &fpc));
31899566063dSJacob Faibussowitsch     PetscCall(SNESSetFunction(snes->npc, fpc, func, funcctx));
31909566063dSJacob Faibussowitsch     PetscCall(SNESGetJacobian(snes, &j, &jpre, &jac, &jacctx));
31919566063dSJacob Faibussowitsch     PetscCall(SNESSetJacobian(snes->npc, j, jpre, jac, jacctx));
31929566063dSJacob Faibussowitsch     PetscCall(SNESGetApplicationContext(snes, &appctx));
31939566063dSJacob Faibussowitsch     PetscCall(SNESSetApplicationContext(snes->npc, appctx));
31949b5c1c08SStefano Zampini     PetscCall(SNESSetUseMatrixFree(snes->npc, mf_operator, mf));
31959566063dSJacob Faibussowitsch     PetscCall(VecDestroy(&fpc));
31966e2a1849SPeter Brune 
31976e2a1849SPeter Brune     /* copy the function pointers over */
31989566063dSJacob Faibussowitsch     PetscCall(PetscObjectCopyFortranFunctionPointers((PetscObject)snes, (PetscObject)snes->npc));
31996e2a1849SPeter Brune 
32006e2a1849SPeter Brune     /* default to 1 iteration */
32019566063dSJacob Faibussowitsch     PetscCall(SNESSetTolerances(snes->npc, 0.0, 0.0, 0.0, 1, snes->npc->max_funcs));
3202efd4aadfSBarry Smith     if (snes->npcside == PC_RIGHT) {
32039566063dSJacob Faibussowitsch       PetscCall(SNESSetNormSchedule(snes->npc, SNES_NORM_FINAL_ONLY));
3204a9936a0cSPeter Brune     } else {
32059566063dSJacob Faibussowitsch       PetscCall(SNESSetNormSchedule(snes->npc, SNES_NORM_NONE));
3206a9936a0cSPeter Brune     }
32079566063dSJacob Faibussowitsch     PetscCall(SNESSetFromOptions(snes->npc));
32086e2a1849SPeter Brune 
32096e2a1849SPeter Brune     /* copy the line search context over */
3210d8d34be6SBarry Smith     if (snes->linesearch && snes->npc->linesearch) {
32119566063dSJacob Faibussowitsch       PetscCall(SNESGetLineSearch(snes, &linesearch));
32129566063dSJacob Faibussowitsch       PetscCall(SNESGetLineSearch(snes->npc, &pclinesearch));
32139566063dSJacob Faibussowitsch       PetscCall(SNESLineSearchGetPreCheck(linesearch, &precheck, &lsprectx));
32149566063dSJacob Faibussowitsch       PetscCall(SNESLineSearchGetPostCheck(linesearch, &postcheck, &lspostctx));
32159566063dSJacob Faibussowitsch       PetscCall(SNESLineSearchSetPreCheck(pclinesearch, precheck, lsprectx));
32169566063dSJacob Faibussowitsch       PetscCall(SNESLineSearchSetPostCheck(pclinesearch, postcheck, lspostctx));
32179566063dSJacob Faibussowitsch       PetscCall(PetscObjectCopyFortranFunctionPointers((PetscObject)linesearch, (PetscObject)pclinesearch));
32186e2a1849SPeter Brune     }
3219d8d34be6SBarry Smith   }
32201baa6e33SBarry Smith   if (snes->mf) PetscCall(SNESSetUpMatrixFree_Private(snes, snes->mf_operator, snes->mf_version));
322148a46eb9SPierre Jolivet   if (snes->ops->usercompute && !snes->user) PetscCall((*snes->ops->usercompute)(snes, (void **)&snes->user));
32226e2a1849SPeter Brune 
322337ec4e1aSPeter Brune   snes->jac_iter = 0;
322437ec4e1aSPeter Brune   snes->pre_iter = 0;
322537ec4e1aSPeter Brune 
3226dbbe0bcdSBarry Smith   PetscTryTypeMethod(snes, setup);
322758c9b817SLisandro Dalcin 
32289566063dSJacob Faibussowitsch   PetscCall(SNESSetDefaultComputeJacobian(snes));
322958b371f3SBarry Smith 
3230b552625fSStefano Zampini   if (snes->npc && snes->npcside == PC_LEFT) {
32316c67d002SPeter Brune     if (snes->functype == SNES_FUNCTION_PRECONDITIONED) {
3232d8d34be6SBarry Smith       if (snes->linesearch) {
32339566063dSJacob Faibussowitsch         PetscCall(SNESGetLineSearch(snes, &linesearch));
32349566063dSJacob Faibussowitsch         PetscCall(SNESLineSearchSetFunction(linesearch, SNESComputeFunctionDefaultNPC));
32356c67d002SPeter Brune       }
32366c67d002SPeter Brune     }
3237d8d34be6SBarry Smith   }
3238fc8bc0e3SRichard Tran Mills   PetscCall(PetscLogEventEnd(SNES_SetUp, snes, 0, 0, 0));
32397aaed0d8SBarry Smith   snes->setupcalled = PETSC_TRUE;
32403ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
32419b94acceSBarry Smith }
32429b94acceSBarry Smith 
324337596af1SLisandro Dalcin /*@
3244f6dfbefdSBarry Smith   SNESReset - Resets a `SNES` context to the snessetupcalled = 0 state and removes any allocated `Vec`s and `Mat`s
324537596af1SLisandro Dalcin 
3246c3339decSBarry Smith   Collective
324737596af1SLisandro Dalcin 
324837596af1SLisandro Dalcin   Input Parameter:
3249f6dfbefdSBarry Smith . snes - iterative context obtained from `SNESCreate()`
325037596af1SLisandro Dalcin 
3251d25893d9SBarry Smith   Level: intermediate
3252d25893d9SBarry Smith 
325395452b02SPatrick Sanan   Notes:
3254f6dfbefdSBarry Smith   Call this if you wish to reuse a `SNES` but with different size vectors
325537596af1SLisandro Dalcin 
3256f6dfbefdSBarry Smith   Also calls the application context destroy routine set with `SNESSetComputeApplicationContext()`
3257f6dfbefdSBarry Smith 
32581cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESDestroy()`, `SNESCreate()`, `SNESSetUp()`, `SNESSolve()`
325937596af1SLisandro Dalcin @*/
3260d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESReset(SNES snes)
3261d71ae5a4SJacob Faibussowitsch {
326237596af1SLisandro Dalcin   PetscFunctionBegin;
326337596af1SLisandro Dalcin   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3264d25893d9SBarry Smith   if (snes->ops->userdestroy && snes->user) {
32659566063dSJacob Faibussowitsch     PetscCall((*snes->ops->userdestroy)((void **)&snes->user));
32660298fd71SBarry Smith     snes->user = NULL;
3267d25893d9SBarry Smith   }
32681baa6e33SBarry Smith   if (snes->npc) PetscCall(SNESReset(snes->npc));
32698a23116dSBarry Smith 
3270dbbe0bcdSBarry Smith   PetscTryTypeMethod(snes, reset);
32711baa6e33SBarry Smith   if (snes->ksp) PetscCall(KSPReset(snes->ksp));
32729e764e56SPeter Brune 
32731baa6e33SBarry Smith   if (snes->linesearch) PetscCall(SNESLineSearchReset(snes->linesearch));
32749e764e56SPeter Brune 
32759566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&snes->vec_rhs));
32769566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&snes->vec_sol));
32779566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&snes->vec_sol_update));
32789566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&snes->vec_func));
32799566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&snes->jacobian));
32809566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&snes->jacobian_pre));
32819566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&snes->picard));
32829566063dSJacob Faibussowitsch   PetscCall(VecDestroyVecs(snes->nwork, &snes->work));
32839566063dSJacob Faibussowitsch   PetscCall(VecDestroyVecs(snes->nvwork, &snes->vwork));
3284f5af7f23SKarl Rupp 
328540fdac6aSLawrence Mitchell   snes->alwayscomputesfinalresidual = PETSC_FALSE;
328640fdac6aSLawrence Mitchell 
328737596af1SLisandro Dalcin   snes->nwork = snes->nvwork = 0;
328837596af1SLisandro Dalcin   snes->setupcalled          = PETSC_FALSE;
32893ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
329037596af1SLisandro Dalcin }
329137596af1SLisandro Dalcin 
329252baeb72SSatish Balay /*@
3293420bcc1bSBarry Smith   SNESConvergedReasonViewCancel - Clears all the reason view functions for a `SNES` object provided with `SNESConvergedReasonViewSet()`
3294c4421ceaSFande Kong 
3295c3339decSBarry Smith   Collective
3296c4421ceaSFande Kong 
3297c4421ceaSFande Kong   Input Parameter:
3298f6dfbefdSBarry Smith . snes - iterative context obtained from `SNESCreate()`
3299c4421ceaSFande Kong 
3300c4421ceaSFande Kong   Level: intermediate
3301c4421ceaSFande Kong 
3302420bcc1bSBarry Smith .seealso: [](ch_snes), `SNES`, `SNESCreate()`, `SNESDestroy()`, `SNESReset()`, `SNESConvergedReasonViewSet()`
3303c4421ceaSFande Kong @*/
3304d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESConvergedReasonViewCancel(SNES snes)
3305d71ae5a4SJacob Faibussowitsch {
3306c4421ceaSFande Kong   PetscInt i;
3307c4421ceaSFande Kong 
3308c4421ceaSFande Kong   PetscFunctionBegin;
3309c4421ceaSFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3310c4421ceaSFande Kong   for (i = 0; i < snes->numberreasonviews; i++) {
331148a46eb9SPierre Jolivet     if (snes->reasonviewdestroy[i]) PetscCall((*snes->reasonviewdestroy[i])(&snes->reasonviewcontext[i]));
3312c4421ceaSFande Kong   }
3313c4421ceaSFande Kong   snes->numberreasonviews = 0;
33143ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3315c4421ceaSFande Kong }
3316c4421ceaSFande Kong 
33171fb7b255SJunchao Zhang /*@C
33189b94acceSBarry Smith   SNESDestroy - Destroys the nonlinear solver context that was created
3319f6dfbefdSBarry Smith   with `SNESCreate()`.
33209b94acceSBarry Smith 
3321c3339decSBarry Smith   Collective
3322c7afd0dbSLois Curfman McInnes 
33239b94acceSBarry Smith   Input Parameter:
3324f6dfbefdSBarry Smith . snes - the `SNES` context
33259b94acceSBarry Smith 
332636851e7fSLois Curfman McInnes   Level: beginner
332736851e7fSLois Curfman McInnes 
33281cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESCreate()`, `SNESSolve()`
33299b94acceSBarry Smith @*/
3330d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESDestroy(SNES *snes)
3331d71ae5a4SJacob Faibussowitsch {
33323a40ed3dSBarry Smith   PetscFunctionBegin;
33333ba16761SJacob Faibussowitsch   if (!*snes) PetscFunctionReturn(PETSC_SUCCESS);
33346bf464f9SBarry Smith   PetscValidHeaderSpecific((*snes), SNES_CLASSID, 1);
33359371c9d4SSatish Balay   if (--((PetscObject)(*snes))->refct > 0) {
33369371c9d4SSatish Balay     *snes = NULL;
33373ba16761SJacob Faibussowitsch     PetscFunctionReturn(PETSC_SUCCESS);
33389371c9d4SSatish Balay   }
3339d4bb536fSBarry Smith 
33409566063dSJacob Faibussowitsch   PetscCall(SNESReset((*snes)));
33419566063dSJacob Faibussowitsch   PetscCall(SNESDestroy(&(*snes)->npc));
33426b8b9a38SLisandro Dalcin 
3343e04113cfSBarry Smith   /* if memory was published with SAWs then destroy it */
33449566063dSJacob Faibussowitsch   PetscCall(PetscObjectSAWsViewOff((PetscObject)*snes));
3345dbbe0bcdSBarry Smith   PetscTryTypeMethod((*snes), destroy);
33466d4c513bSLisandro Dalcin 
33479566063dSJacob Faibussowitsch   if ((*snes)->dm) PetscCall(DMCoarsenHookRemove((*snes)->dm, DMCoarsenHook_SNESVecSol, DMRestrictHook_SNESVecSol, *snes));
33489566063dSJacob Faibussowitsch   PetscCall(DMDestroy(&(*snes)->dm));
33499566063dSJacob Faibussowitsch   PetscCall(KSPDestroy(&(*snes)->ksp));
33509566063dSJacob Faibussowitsch   PetscCall(SNESLineSearchDestroy(&(*snes)->linesearch));
33516b8b9a38SLisandro Dalcin 
33529566063dSJacob Faibussowitsch   PetscCall(PetscFree((*snes)->kspconvctx));
335348a46eb9SPierre Jolivet   if ((*snes)->ops->convergeddestroy) PetscCall((*(*snes)->ops->convergeddestroy)((*snes)->cnvP));
335448a46eb9SPierre Jolivet   if ((*snes)->conv_hist_alloc) PetscCall(PetscFree2((*snes)->conv_hist, (*snes)->conv_hist_its));
33559566063dSJacob Faibussowitsch   PetscCall(SNESMonitorCancel((*snes)));
33569566063dSJacob Faibussowitsch   PetscCall(SNESConvergedReasonViewCancel((*snes)));
33579566063dSJacob Faibussowitsch   PetscCall(PetscHeaderDestroy(snes));
33583ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
33599b94acceSBarry Smith }
33609b94acceSBarry Smith 
33619b94acceSBarry Smith /* ----------- Routines to set solver parameters ---------- */
33629b94acceSBarry Smith 
3363a8054027SBarry Smith /*@
3364a8054027SBarry Smith   SNESSetLagPreconditioner - Determines when the preconditioner is rebuilt in the nonlinear solve.
3365a8054027SBarry Smith 
3366c3339decSBarry Smith   Logically Collective
3367a8054027SBarry Smith 
3368a8054027SBarry Smith   Input Parameters:
3369f6dfbefdSBarry Smith + snes - the `SNES` context
3370d8e291bfSBarry Smith - lag  - 1 means rebuild every time the Jacobian is computed within a single nonlinear solve, 2 means every second time
33713b4f5425SBarry Smith          the Jacobian is built etc. -2 indicates rebuild preconditioner at next chance but then never rebuild after that
3372a8054027SBarry Smith 
3373a8054027SBarry Smith   Options Database Keys:
3374420bcc1bSBarry Smith + -snes_lag_jacobian_persists <true,false>       - sets the persistence through multiple `SNESSolve()`
33753d5a8a6aSBarry Smith . -snes_lag_jacobian <-2,1,2,...>                - sets the lag
3376420bcc1bSBarry Smith . -snes_lag_preconditioner_persists <true,false> - sets the persistence through multiple `SNESSolve()`
33773d5a8a6aSBarry Smith - -snes_lag_preconditioner <-2,1,2,...>          - sets the lag
3378a8054027SBarry Smith 
3379dc4c0fb0SBarry Smith   Level: intermediate
3380dc4c0fb0SBarry Smith 
3381420bcc1bSBarry Smith   Notes:
3382a8054027SBarry Smith   The default is 1
3383420bcc1bSBarry Smith 
3384f6dfbefdSBarry Smith   The preconditioner is ALWAYS built in the first iteration of a nonlinear solve unless lag is -1 or `SNESSetLagPreconditionerPersists()` was called
3385d8e291bfSBarry Smith 
3386f6dfbefdSBarry Smith   `SNESSetLagPreconditionerPersists()` allows using the same uniform lagging (for example every second linear solve) across multiple nonlinear solves.
3387a8054027SBarry Smith 
33881cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetTrustRegionTolerance()`, `SNESGetLagPreconditioner()`, `SNESSetLagJacobian()`, `SNESGetLagJacobian()`, `SNESSetLagPreconditionerPersists()`,
3389f6dfbefdSBarry Smith           `SNESSetLagJacobianPersists()`, `SNES`, `SNESSolve()`
3390a8054027SBarry Smith @*/
3391d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetLagPreconditioner(SNES snes, PetscInt lag)
3392d71ae5a4SJacob Faibussowitsch {
3393a8054027SBarry Smith   PetscFunctionBegin;
33940700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
33955f80ce2aSJacob Faibussowitsch   PetscCheck(lag >= -2, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Lag must be -2, -1, 1 or greater");
33965f80ce2aSJacob Faibussowitsch   PetscCheck(lag, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Lag cannot be 0");
3397c5eb9154SBarry Smith   PetscValidLogicalCollectiveInt(snes, lag, 2);
3398a8054027SBarry Smith   snes->lagpreconditioner = lag;
33993ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3400a8054027SBarry Smith }
3401a8054027SBarry Smith 
3402efd51863SBarry Smith /*@
3403f6dfbefdSBarry Smith   SNESSetGridSequence - sets the number of steps of grid sequencing that `SNES` will do
3404efd51863SBarry Smith 
3405c3339decSBarry Smith   Logically Collective
3406efd51863SBarry Smith 
3407efd51863SBarry Smith   Input Parameters:
3408f6dfbefdSBarry Smith + snes  - the `SNES` context
3409efd51863SBarry Smith - steps - the number of refinements to do, defaults to 0
3410efd51863SBarry Smith 
3411f6dfbefdSBarry Smith   Options Database Key:
341267b8a455SSatish Balay . -snes_grid_sequence <steps> - Use grid sequencing to generate initial guess
3413efd51863SBarry Smith 
3414efd51863SBarry Smith   Level: intermediate
3415efd51863SBarry Smith 
3416f6dfbefdSBarry Smith   Note:
3417f6dfbefdSBarry Smith   Use `SNESGetSolution()` to extract the fine grid solution after grid sequencing.
3418c0df2a02SJed Brown 
3419420bcc1bSBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetTrustRegionTolerance()`, `SNESGetLagPreconditioner()`, `SNESSetLagJacobian()`, `SNESGetLagJacobian()`, `SNESGetGridSequence()`,
3420420bcc1bSBarry Smith           `SNESetDM()`
3421efd51863SBarry Smith @*/
3422d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetGridSequence(SNES snes, PetscInt steps)
3423d71ae5a4SJacob Faibussowitsch {
3424efd51863SBarry Smith   PetscFunctionBegin;
3425efd51863SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3426efd51863SBarry Smith   PetscValidLogicalCollectiveInt(snes, steps, 2);
3427efd51863SBarry Smith   snes->gridsequence = steps;
34283ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3429efd51863SBarry Smith }
3430efd51863SBarry Smith 
3431fa19ca70SBarry Smith /*@
3432f6dfbefdSBarry Smith   SNESGetGridSequence - gets the number of steps of grid sequencing that `SNES` will do
3433fa19ca70SBarry Smith 
3434c3339decSBarry Smith   Logically Collective
3435fa19ca70SBarry Smith 
3436fa19ca70SBarry Smith   Input Parameter:
3437f6dfbefdSBarry Smith . snes - the `SNES` context
3438fa19ca70SBarry Smith 
3439fa19ca70SBarry Smith   Output Parameter:
3440fa19ca70SBarry Smith . steps - the number of refinements to do, defaults to 0
3441fa19ca70SBarry Smith 
3442fa19ca70SBarry Smith   Level: intermediate
3443fa19ca70SBarry Smith 
34441cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetTrustRegionTolerance()`, `SNESGetLagPreconditioner()`, `SNESSetLagJacobian()`, `SNESGetLagJacobian()`, `SNESSetGridSequence()`
3445fa19ca70SBarry Smith @*/
3446d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetGridSequence(SNES snes, PetscInt *steps)
3447d71ae5a4SJacob Faibussowitsch {
3448fa19ca70SBarry Smith   PetscFunctionBegin;
3449fa19ca70SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3450fa19ca70SBarry Smith   *steps = snes->gridsequence;
34513ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3452fa19ca70SBarry Smith }
3453fa19ca70SBarry Smith 
3454a8054027SBarry Smith /*@
3455f6dfbefdSBarry Smith   SNESGetLagPreconditioner - Return how often the preconditioner is rebuilt
3456a8054027SBarry Smith 
34573f9fe445SBarry Smith   Not Collective
3458a8054027SBarry Smith 
3459a8054027SBarry Smith   Input Parameter:
3460f6dfbefdSBarry Smith . snes - the `SNES` context
3461a8054027SBarry Smith 
3462a8054027SBarry Smith   Output Parameter:
3463a8054027SBarry Smith . lag - -1 indicates NEVER rebuild, 1 means rebuild every time the Jacobian is computed within a single nonlinear solve, 2 means every second time
34643b4f5425SBarry Smith          the Jacobian is built etc. -2 indicates rebuild preconditioner at next chance but then never rebuild after that
3465a8054027SBarry Smith 
3466dc4c0fb0SBarry Smith   Level: intermediate
3467dc4c0fb0SBarry Smith 
3468a8054027SBarry Smith   Notes:
3469a8054027SBarry Smith   The default is 1
3470f6dfbefdSBarry Smith 
3471a8054027SBarry Smith   The preconditioner is ALWAYS built in the first iteration of a nonlinear solve unless lag is -1
3472a8054027SBarry Smith 
34731cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetTrustRegionTolerance()`, `SNESSetLagPreconditioner()`, `SNESSetLagJacobianPersists()`, `SNESSetLagPreconditionerPersists()`
3474a8054027SBarry Smith @*/
3475d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetLagPreconditioner(SNES snes, PetscInt *lag)
3476d71ae5a4SJacob Faibussowitsch {
3477a8054027SBarry Smith   PetscFunctionBegin;
34780700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3479a8054027SBarry Smith   *lag = snes->lagpreconditioner;
34803ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3481a8054027SBarry Smith }
3482a8054027SBarry Smith 
3483e35cf81dSBarry Smith /*@
3484f6dfbefdSBarry Smith   SNESSetLagJacobian - Set when the Jacobian is rebuilt in the nonlinear solve. See `SNESSetLagPreconditioner()` for determining how
3485e35cf81dSBarry Smith   often the preconditioner is rebuilt.
3486e35cf81dSBarry Smith 
3487c3339decSBarry Smith   Logically Collective
3488e35cf81dSBarry Smith 
3489e35cf81dSBarry Smith   Input Parameters:
3490f6dfbefdSBarry Smith + snes - the `SNES` context
3491e35cf81dSBarry Smith - lag  - -1 indicates NEVER rebuild, 1 means rebuild every time the Jacobian is computed within a single nonlinear solve, 2 means every second time
3492fe3ffe1eSBarry Smith          the Jacobian is built etc. -2 means rebuild at next chance but then never again
3493e35cf81dSBarry Smith 
3494e35cf81dSBarry Smith   Options Database Keys:
349579a4f3cfSmarkadams4 + -snes_lag_jacobian_persists <true,false>       - sets the persistence through multiple SNES solves
34963d5a8a6aSBarry Smith . -snes_lag_jacobian <-2,1,2,...>                - sets the lag
349779a4f3cfSmarkadams4 . -snes_lag_preconditioner_persists <true,false> - sets the persistence through multiple SNES solves
34983d5a8a6aSBarry Smith - -snes_lag_preconditioner <-2,1,2,...>          - sets the lag.
3499e35cf81dSBarry Smith 
3500dc4c0fb0SBarry Smith   Level: intermediate
3501dc4c0fb0SBarry Smith 
3502e35cf81dSBarry Smith   Notes:
3503e35cf81dSBarry Smith   The default is 1
3504f6dfbefdSBarry Smith 
3505e35cf81dSBarry Smith   The Jacobian is ALWAYS built in the first iteration of a nonlinear solve unless lag is -1
3506f6dfbefdSBarry Smith 
3507fe3ffe1eSBarry Smith   If  -1 is used before the very first nonlinear solve the CODE WILL FAIL! because no Jacobian is used, use -2 to indicate you want it recomputed
3508fe3ffe1eSBarry Smith   at the next Newton step but never again (unless it is reset to another value)
3509e35cf81dSBarry Smith 
35101cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetTrustRegionTolerance()`, `SNESGetLagPreconditioner()`, `SNESSetLagPreconditioner()`, `SNESGetLagJacobianPersists()`, `SNESSetLagPreconditionerPersists()`
3511e35cf81dSBarry Smith @*/
3512d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetLagJacobian(SNES snes, PetscInt lag)
3513d71ae5a4SJacob Faibussowitsch {
3514e35cf81dSBarry Smith   PetscFunctionBegin;
35150700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
35165f80ce2aSJacob Faibussowitsch   PetscCheck(lag >= -2, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Lag must be -2, -1, 1 or greater");
35175f80ce2aSJacob Faibussowitsch   PetscCheck(lag, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Lag cannot be 0");
3518c5eb9154SBarry Smith   PetscValidLogicalCollectiveInt(snes, lag, 2);
3519e35cf81dSBarry Smith   snes->lagjacobian = lag;
35203ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3521e35cf81dSBarry Smith }
3522e35cf81dSBarry Smith 
3523e35cf81dSBarry Smith /*@
3524f6dfbefdSBarry Smith   SNESGetLagJacobian - Get how often the Jacobian is rebuilt. See `SNESGetLagPreconditioner()` to determine when the preconditioner is rebuilt
3525e35cf81dSBarry Smith 
35263f9fe445SBarry Smith   Not Collective
3527e35cf81dSBarry Smith 
3528e35cf81dSBarry Smith   Input Parameter:
3529f6dfbefdSBarry Smith . snes - the `SNES` context
3530e35cf81dSBarry Smith 
3531e35cf81dSBarry Smith   Output Parameter:
3532e35cf81dSBarry Smith . lag - -1 indicates NEVER rebuild, 1 means rebuild every time the Jacobian is computed within a single nonlinear solve, 2 means every second time
3533e35cf81dSBarry Smith          the Jacobian is built etc.
3534e35cf81dSBarry Smith 
3535dc4c0fb0SBarry Smith   Level: intermediate
3536dc4c0fb0SBarry Smith 
3537e35cf81dSBarry Smith   Notes:
3538e35cf81dSBarry Smith   The default is 1
3539f6dfbefdSBarry Smith 
3540f6dfbefdSBarry Smith   The jacobian is ALWAYS built in the first iteration of a nonlinear solve unless lag is -1 or `SNESSetLagJacobianPersists()` was called.
3541e35cf81dSBarry Smith 
35421cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetTrustRegionTolerance()`, `SNESSetLagJacobian()`, `SNESSetLagPreconditioner()`, `SNESGetLagPreconditioner()`, `SNESSetLagJacobianPersists()`, `SNESSetLagPreconditionerPersists()`
3543e35cf81dSBarry Smith 
3544e35cf81dSBarry Smith @*/
3545d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetLagJacobian(SNES snes, PetscInt *lag)
3546d71ae5a4SJacob Faibussowitsch {
3547e35cf81dSBarry Smith   PetscFunctionBegin;
35480700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3549e35cf81dSBarry Smith   *lag = snes->lagjacobian;
35503ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3551e35cf81dSBarry Smith }
3552e35cf81dSBarry Smith 
355337ec4e1aSPeter Brune /*@
3554f6dfbefdSBarry Smith   SNESSetLagJacobianPersists - Set whether or not the Jacobian lagging persists through multiple nonlinear solves
355537ec4e1aSPeter Brune 
3556c3339decSBarry Smith   Logically collective
355737ec4e1aSPeter Brune 
3558d8d19677SJose E. Roman   Input Parameters:
3559f6dfbefdSBarry Smith + snes - the `SNES` context
35609d7e2deaSPeter Brune - flg  - jacobian lagging persists if true
356137ec4e1aSPeter Brune 
356237ec4e1aSPeter Brune   Options Database Keys:
356379a4f3cfSmarkadams4 + -snes_lag_jacobian_persists <true,false>       - sets the persistence through multiple SNES solves
35643d5a8a6aSBarry Smith . -snes_lag_jacobian <-2,1,2,...>                - sets the lag
356579a4f3cfSmarkadams4 . -snes_lag_preconditioner_persists <true,false> - sets the persistence through multiple SNES solves
35663d5a8a6aSBarry Smith - -snes_lag_preconditioner <-2,1,2,...>          - sets the lag
35673d5a8a6aSBarry Smith 
3568dc4c0fb0SBarry Smith   Level: advanced
3569dc4c0fb0SBarry Smith 
357095452b02SPatrick Sanan   Notes:
3571420bcc1bSBarry Smith   Normally when `SNESSetLagJacobian()` is used, the Jacobian is always rebuilt at the beginning of each new nonlinear solve, this removes that behavior
3572f6dfbefdSBarry Smith 
357395452b02SPatrick Sanan   This is useful both for nonlinear preconditioning, where it's appropriate to have the Jacobian be stale by
357437ec4e1aSPeter Brune   several solves, and for implicit time-stepping, where Jacobian lagging in the inner nonlinear solve over several
357537ec4e1aSPeter Brune   timesteps may present huge efficiency gains.
357637ec4e1aSPeter Brune 
357742747ad1SJacob Faibussowitsch .seealso: [](ch_snes), `SNES`, `SNESSetLagPreconditionerPersists()`, `SNESSetLagJacobian()`, `SNESGetLagJacobian()`, `SNESGetNPC()`
357837ec4e1aSPeter Brune @*/
3579d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetLagJacobianPersists(SNES snes, PetscBool flg)
3580d71ae5a4SJacob Faibussowitsch {
358137ec4e1aSPeter Brune   PetscFunctionBegin;
358237ec4e1aSPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
358337ec4e1aSPeter Brune   PetscValidLogicalCollectiveBool(snes, flg, 2);
358437ec4e1aSPeter Brune   snes->lagjac_persist = flg;
35853ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
358637ec4e1aSPeter Brune }
358737ec4e1aSPeter Brune 
358837ec4e1aSPeter Brune /*@
3589d8e291bfSBarry Smith   SNESSetLagPreconditionerPersists - Set whether or not the preconditioner lagging persists through multiple nonlinear solves
359037ec4e1aSPeter Brune 
3591c3339decSBarry Smith   Logically Collective
359237ec4e1aSPeter Brune 
3593d8d19677SJose E. Roman   Input Parameters:
3594f6dfbefdSBarry Smith + snes - the `SNES` context
35959d7e2deaSPeter Brune - flg  - preconditioner lagging persists if true
359637ec4e1aSPeter Brune 
359737ec4e1aSPeter Brune   Options Database Keys:
359879a4f3cfSmarkadams4 + -snes_lag_jacobian_persists <true,false>       - sets the persistence through multiple SNES solves
35993d5a8a6aSBarry Smith . -snes_lag_jacobian <-2,1,2,...>                - sets the lag
360079a4f3cfSmarkadams4 . -snes_lag_preconditioner_persists <true,false> - sets the persistence through multiple SNES solves
36013d5a8a6aSBarry Smith - -snes_lag_preconditioner <-2,1,2,...>          - sets the lag
360237ec4e1aSPeter Brune 
3603dc4c0fb0SBarry Smith   Level: developer
3604dc4c0fb0SBarry Smith 
360595452b02SPatrick Sanan   Notes:
3606420bcc1bSBarry Smith   Normally when `SNESSetLagPreconditioner()` is used, the preconditioner is always rebuilt at the beginning of each new nonlinear solve, this removes that behavior
3607f6dfbefdSBarry Smith 
360895452b02SPatrick Sanan   This is useful both for nonlinear preconditioning, where it's appropriate to have the preconditioner be stale
360937ec4e1aSPeter Brune   by several solves, and for implicit time-stepping, where preconditioner lagging in the inner nonlinear solve over
361037ec4e1aSPeter Brune   several timesteps may present huge efficiency gains.
361137ec4e1aSPeter Brune 
36121cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetLagJacobianPersists()`, `SNESSetLagJacobian()`, `SNESGetLagJacobian()`, `SNESGetNPC()`, `SNESSetLagPreconditioner()`
361337ec4e1aSPeter Brune @*/
3614d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetLagPreconditionerPersists(SNES snes, PetscBool flg)
3615d71ae5a4SJacob Faibussowitsch {
361637ec4e1aSPeter Brune   PetscFunctionBegin;
361737ec4e1aSPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
361837ec4e1aSPeter Brune   PetscValidLogicalCollectiveBool(snes, flg, 2);
361937ec4e1aSPeter Brune   snes->lagpre_persist = flg;
36203ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
362137ec4e1aSPeter Brune }
362237ec4e1aSPeter Brune 
36239b94acceSBarry Smith /*@
3624f6dfbefdSBarry Smith   SNESSetForceIteration - force `SNESSolve()` to take at least one iteration regardless of the initial residual norm
3625be5caee7SBarry Smith 
3626c3339decSBarry Smith   Logically Collective
3627be5caee7SBarry Smith 
3628be5caee7SBarry Smith   Input Parameters:
3629f6dfbefdSBarry Smith + snes  - the `SNES` context
3630f6dfbefdSBarry Smith - force - `PETSC_TRUE` require at least one iteration
3631be5caee7SBarry Smith 
3632f6dfbefdSBarry Smith   Options Database Key:
3633be5caee7SBarry Smith . -snes_force_iteration <force> - Sets forcing an iteration
3634be5caee7SBarry Smith 
3635dc4c0fb0SBarry Smith   Level: intermediate
3636dc4c0fb0SBarry Smith 
3637f6dfbefdSBarry Smith   Note:
3638f6dfbefdSBarry Smith   This is used sometimes with `TS` to prevent `TS` from detecting a false steady state solution
3639be5caee7SBarry Smith 
36401cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `TS`, `SNESSetTrustRegionTolerance()`, `SNESSetDivergenceTolerance()`
3641be5caee7SBarry Smith @*/
3642d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetForceIteration(SNES snes, PetscBool force)
3643d71ae5a4SJacob Faibussowitsch {
3644be5caee7SBarry Smith   PetscFunctionBegin;
3645be5caee7SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3646be5caee7SBarry Smith   snes->forceiteration = force;
36473ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3648be5caee7SBarry Smith }
3649be5caee7SBarry Smith 
365085216dc7SFande Kong /*@
3651f6dfbefdSBarry Smith   SNESGetForceIteration - Check whether or not `SNESSolve()` take at least one iteration regardless of the initial residual norm
365285216dc7SFande Kong 
3653c3339decSBarry Smith   Logically Collective
365485216dc7SFande Kong 
36552fe279fdSBarry Smith   Input Parameter:
3656f6dfbefdSBarry Smith . snes - the `SNES` context
365785216dc7SFande Kong 
365885216dc7SFande Kong   Output Parameter:
3659dc4c0fb0SBarry Smith . force - `PETSC_TRUE` requires at least one iteration.
366085216dc7SFande Kong 
366106dd6b0eSSatish Balay   Level: intermediate
366206dd6b0eSSatish Balay 
36631cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetForceIteration()`, `SNESSetTrustRegionTolerance()`, `SNESSetDivergenceTolerance()`
366485216dc7SFande Kong @*/
3665d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetForceIteration(SNES snes, PetscBool *force)
3666d71ae5a4SJacob Faibussowitsch {
366785216dc7SFande Kong   PetscFunctionBegin;
366885216dc7SFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
366985216dc7SFande Kong   *force = snes->forceiteration;
36703ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
367185216dc7SFande Kong }
3672be5caee7SBarry Smith 
3673be5caee7SBarry Smith /*@
3674f6dfbefdSBarry Smith   SNESSetTolerances - Sets `SNES` various parameters used in convergence tests.
36759b94acceSBarry Smith 
3676c3339decSBarry Smith   Logically Collective
3677c7afd0dbSLois Curfman McInnes 
36789b94acceSBarry Smith   Input Parameters:
3679f6dfbefdSBarry Smith + snes   - the `SNES` context
368070441072SBarry Smith . abstol - absolute convergence tolerance
368133174efeSLois Curfman McInnes . rtol   - relative convergence tolerance
36825358d0d4SBarry Smith . stol   - convergence tolerance in terms of the norm of the change in the solution between steps,  || delta x || < stol*|| x ||
3683f6dfbefdSBarry Smith . maxit  - maximum number of iterations, default 50.
3684f6dfbefdSBarry Smith - maxf   - maximum number of function evaluations (-1 indicates no limit), default 1000
3685fee21e36SBarry Smith 
368633174efeSLois Curfman McInnes   Options Database Keys:
368770441072SBarry Smith + -snes_atol <abstol>    - Sets abstol
3688c7afd0dbSLois Curfman McInnes . -snes_rtol <rtol>      - Sets rtol
3689c7afd0dbSLois Curfman McInnes . -snes_stol <stol>      - Sets stol
3690c7afd0dbSLois Curfman McInnes . -snes_max_it <maxit>   - Sets maxit
3691c7afd0dbSLois Curfman McInnes - -snes_max_funcs <maxf> - Sets maxf
36929b94acceSBarry Smith 
369336851e7fSLois Curfman McInnes   Level: intermediate
369436851e7fSLois Curfman McInnes 
369500677de2SStefano Zampini .seealso: [](ch_snes), `SNESSolve()`, `SNES`, `SNESSetTrustRegionTolerance()`, `SNESSetDivergenceTolerance()`, `SNESSetForceIteration()`
36969b94acceSBarry Smith @*/
3697d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetTolerances(SNES snes, PetscReal abstol, PetscReal rtol, PetscReal stol, PetscInt maxit, PetscInt maxf)
3698d71ae5a4SJacob Faibussowitsch {
36993a40ed3dSBarry Smith   PetscFunctionBegin;
37000700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3701c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, abstol, 2);
3702c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, rtol, 3);
3703c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, stol, 4);
3704c5eb9154SBarry Smith   PetscValidLogicalCollectiveInt(snes, maxit, 5);
3705c5eb9154SBarry Smith   PetscValidLogicalCollectiveInt(snes, maxf, 6);
3706c5eb9154SBarry Smith 
370713bcc0bdSJacob Faibussowitsch   if (abstol != (PetscReal)PETSC_DEFAULT) {
37085f80ce2aSJacob Faibussowitsch     PetscCheck(abstol >= 0.0, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_OUTOFRANGE, "Absolute tolerance %g must be non-negative", (double)abstol);
3709ab54825eSJed Brown     snes->abstol = abstol;
3710ab54825eSJed Brown   }
371113bcc0bdSJacob Faibussowitsch   if (rtol != (PetscReal)PETSC_DEFAULT) {
37125f80ce2aSJacob Faibussowitsch     PetscCheck(rtol >= 0.0 && 1.0 > rtol, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_OUTOFRANGE, "Relative tolerance %g must be non-negative and less than 1.0", (double)rtol);
3713ab54825eSJed Brown     snes->rtol = rtol;
3714ab54825eSJed Brown   }
371513bcc0bdSJacob Faibussowitsch   if (stol != (PetscReal)PETSC_DEFAULT) {
37165f80ce2aSJacob Faibussowitsch     PetscCheck(stol >= 0.0, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_OUTOFRANGE, "Step tolerance %g must be non-negative", (double)stol);
3717c60f73f4SPeter Brune     snes->stol = stol;
3718ab54825eSJed Brown   }
3719ab54825eSJed Brown   if (maxit != PETSC_DEFAULT) {
372063a3b9bcSJacob Faibussowitsch     PetscCheck(maxit >= 0, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_OUTOFRANGE, "Maximum number of iterations %" PetscInt_FMT " must be non-negative", maxit);
3721ab54825eSJed Brown     snes->max_its = maxit;
3722ab54825eSJed Brown   }
3723ab54825eSJed Brown   if (maxf != PETSC_DEFAULT) {
372463a3b9bcSJacob Faibussowitsch     PetscCheck(maxf >= -1, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_OUTOFRANGE, "Maximum number of function evaluations %" PetscInt_FMT " must be -1 or nonnegative", maxf);
3725ab54825eSJed Brown     snes->max_funcs = maxf;
3726ab54825eSJed Brown   }
372788976e71SPeter Brune   snes->tolerancesset = PETSC_TRUE;
37283ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
37299b94acceSBarry Smith }
37309b94acceSBarry Smith 
3731e4d06f11SPatrick Farrell /*@
3732f6dfbefdSBarry Smith   SNESSetDivergenceTolerance - Sets the divergence tolerance used for the `SNES` divergence test.
3733e4d06f11SPatrick Farrell 
3734c3339decSBarry Smith   Logically Collective
3735e4d06f11SPatrick Farrell 
3736e4d06f11SPatrick Farrell   Input Parameters:
3737f6dfbefdSBarry Smith + snes   - the `SNES` context
3738f6dfbefdSBarry Smith - divtol - the divergence tolerance. Use -1 to deactivate the test, default is 1e4
3739e4d06f11SPatrick Farrell 
3740f6dfbefdSBarry Smith   Options Database Key:
3741dc4c0fb0SBarry Smith . -snes_divergence_tolerance <divtol> - Sets `divtol`
3742e4d06f11SPatrick Farrell 
3743e4d06f11SPatrick Farrell   Level: intermediate
3744e4d06f11SPatrick Farrell 
37451cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetTolerances()`, `SNESGetDivergenceTolerance`
3746e4d06f11SPatrick Farrell @*/
3747d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetDivergenceTolerance(SNES snes, PetscReal divtol)
3748d71ae5a4SJacob Faibussowitsch {
3749e4d06f11SPatrick Farrell   PetscFunctionBegin;
3750e4d06f11SPatrick Farrell   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3751e4d06f11SPatrick Farrell   PetscValidLogicalCollectiveReal(snes, divtol, 2);
3752e4d06f11SPatrick Farrell 
375313bcc0bdSJacob Faibussowitsch   if (divtol != (PetscReal)PETSC_DEFAULT) {
3754e4d06f11SPatrick Farrell     snes->divtol = divtol;
37559371c9d4SSatish Balay   } else {
3756e4d06f11SPatrick Farrell     snes->divtol = 1.0e4;
3757e4d06f11SPatrick Farrell   }
37583ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3759e4d06f11SPatrick Farrell }
3760e4d06f11SPatrick Farrell 
37619b94acceSBarry Smith /*@
376233174efeSLois Curfman McInnes   SNESGetTolerances - Gets various parameters used in convergence tests.
376333174efeSLois Curfman McInnes 
3764c7afd0dbSLois Curfman McInnes   Not Collective
3765c7afd0dbSLois Curfman McInnes 
376633174efeSLois Curfman McInnes   Input Parameters:
3767f6dfbefdSBarry Smith + snes  - the `SNES` context
376885385478SLisandro Dalcin . atol  - absolute convergence tolerance
376933174efeSLois Curfman McInnes . rtol  - relative convergence tolerance
377033174efeSLois Curfman McInnes . stol  - convergence tolerance in terms of the norm
377133174efeSLois Curfman McInnes            of the change in the solution between steps
377233174efeSLois Curfman McInnes . maxit - maximum number of iterations
3773c7afd0dbSLois Curfman McInnes - maxf  - maximum number of function evaluations
3774fee21e36SBarry Smith 
377536851e7fSLois Curfman McInnes   Level: intermediate
377636851e7fSLois Curfman McInnes 
3777dc4c0fb0SBarry Smith   Note:
3778dc4c0fb0SBarry Smith   The user can specify `NULL` for any parameter that is not needed.
3779dc4c0fb0SBarry Smith 
37801cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetTolerances()`
378133174efeSLois Curfman McInnes @*/
3782d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetTolerances(SNES snes, PetscReal *atol, PetscReal *rtol, PetscReal *stol, PetscInt *maxit, PetscInt *maxf)
3783d71ae5a4SJacob Faibussowitsch {
37843a40ed3dSBarry Smith   PetscFunctionBegin;
37850700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
378685385478SLisandro Dalcin   if (atol) *atol = snes->abstol;
378733174efeSLois Curfman McInnes   if (rtol) *rtol = snes->rtol;
3788c60f73f4SPeter Brune   if (stol) *stol = snes->stol;
378933174efeSLois Curfman McInnes   if (maxit) *maxit = snes->max_its;
379033174efeSLois Curfman McInnes   if (maxf) *maxf = snes->max_funcs;
37913ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
379233174efeSLois Curfman McInnes }
379333174efeSLois Curfman McInnes 
3794e4d06f11SPatrick Farrell /*@
3795e4d06f11SPatrick Farrell   SNESGetDivergenceTolerance - Gets divergence tolerance used in divergence test.
3796e4d06f11SPatrick Farrell 
3797e4d06f11SPatrick Farrell   Not Collective
3798e4d06f11SPatrick Farrell 
3799e4d06f11SPatrick Farrell   Input Parameters:
3800f6dfbefdSBarry Smith + snes   - the `SNES` context
3801e4d06f11SPatrick Farrell - divtol - divergence tolerance
3802e4d06f11SPatrick Farrell 
3803e4d06f11SPatrick Farrell   Level: intermediate
3804e4d06f11SPatrick Farrell 
38051cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetDivergenceTolerance()`
3806e4d06f11SPatrick Farrell @*/
3807d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetDivergenceTolerance(SNES snes, PetscReal *divtol)
3808d71ae5a4SJacob Faibussowitsch {
3809e4d06f11SPatrick Farrell   PetscFunctionBegin;
3810e4d06f11SPatrick Farrell   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3811e4d06f11SPatrick Farrell   if (divtol) *divtol = snes->divtol;
38123ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3813e4d06f11SPatrick Farrell }
3814e4d06f11SPatrick Farrell 
381533174efeSLois Curfman McInnes /*@
38169b94acceSBarry Smith   SNESSetTrustRegionTolerance - Sets the trust region parameter tolerance.
38179b94acceSBarry Smith 
3818c3339decSBarry Smith   Logically Collective
3819fee21e36SBarry Smith 
3820c7afd0dbSLois Curfman McInnes   Input Parameters:
3821f6dfbefdSBarry Smith + snes - the `SNES` context
3822c7afd0dbSLois Curfman McInnes - tol  - tolerance
3823c7afd0dbSLois Curfman McInnes 
38249b94acceSBarry Smith   Options Database Key:
38254a221d59SStefano Zampini . -snes_tr_tol <tol> - Sets tol
38269b94acceSBarry Smith 
382736851e7fSLois Curfman McInnes   Level: intermediate
382836851e7fSLois Curfman McInnes 
38291cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESNEWTONTR`, `SNESSetTolerances()`
38309b94acceSBarry Smith @*/
3831d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetTrustRegionTolerance(SNES snes, PetscReal tol)
3832d71ae5a4SJacob Faibussowitsch {
38333a40ed3dSBarry Smith   PetscFunctionBegin;
38340700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3835c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, tol, 2);
38369b94acceSBarry Smith   snes->deltatol = tol;
38373ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
38389b94acceSBarry Smith }
38399b94acceSBarry Smith 
38406ba87a44SLisandro Dalcin PETSC_INTERN PetscErrorCode SNESMonitorRange_Private(SNES, PetscInt, PetscReal *);
38416ba87a44SLisandro Dalcin 
3842d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESMonitorLGRange(SNES snes, PetscInt n, PetscReal rnorm, void *monctx)
3843d71ae5a4SJacob Faibussowitsch {
3844b271bb04SBarry Smith   PetscDrawLG      lg;
3845b271bb04SBarry Smith   PetscReal        x, y, per;
3846b271bb04SBarry Smith   PetscViewer      v = (PetscViewer)monctx;
3847b271bb04SBarry Smith   static PetscReal prev; /* should be in the context */
3848b271bb04SBarry Smith   PetscDraw        draw;
3849b271bb04SBarry Smith 
3850459f5d12SBarry Smith   PetscFunctionBegin;
38514d4332d5SBarry Smith   PetscValidHeaderSpecific(v, PETSC_VIEWER_CLASSID, 4);
38529566063dSJacob Faibussowitsch   PetscCall(PetscViewerDrawGetDrawLG(v, 0, &lg));
38539566063dSJacob Faibussowitsch   if (!n) PetscCall(PetscDrawLGReset(lg));
38549566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGGetDraw(lg, &draw));
38559566063dSJacob Faibussowitsch   PetscCall(PetscDrawSetTitle(draw, "Residual norm"));
3856b271bb04SBarry Smith   x = (PetscReal)n;
385777b4d14cSPeter Brune   if (rnorm > 0.0) y = PetscLog10Real(rnorm);
385894c9c6d3SKarl Rupp   else y = -15.0;
38599566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGAddPoint(lg, &x, &y));
38606934998bSLisandro Dalcin   if (n < 20 || !(n % 5) || snes->reason) {
38619566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGDraw(lg));
38629566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGSave(lg));
3863b271bb04SBarry Smith   }
3864b271bb04SBarry Smith 
38659566063dSJacob Faibussowitsch   PetscCall(PetscViewerDrawGetDrawLG(v, 1, &lg));
38669566063dSJacob Faibussowitsch   if (!n) PetscCall(PetscDrawLGReset(lg));
38679566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGGetDraw(lg, &draw));
3868aaa8cc7dSPierre Jolivet   PetscCall(PetscDrawSetTitle(draw, "% elements > .2*max element"));
38699566063dSJacob Faibussowitsch   PetscCall(SNESMonitorRange_Private(snes, n, &per));
3870b271bb04SBarry Smith   x = (PetscReal)n;
3871b271bb04SBarry Smith   y = 100.0 * per;
38729566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGAddPoint(lg, &x, &y));
38736934998bSLisandro Dalcin   if (n < 20 || !(n % 5) || snes->reason) {
38749566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGDraw(lg));
38759566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGSave(lg));
3876b271bb04SBarry Smith   }
3877b271bb04SBarry Smith 
38789566063dSJacob Faibussowitsch   PetscCall(PetscViewerDrawGetDrawLG(v, 2, &lg));
38799371c9d4SSatish Balay   if (!n) {
38809371c9d4SSatish Balay     prev = rnorm;
38819371c9d4SSatish Balay     PetscCall(PetscDrawLGReset(lg));
38829371c9d4SSatish Balay   }
38839566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGGetDraw(lg, &draw));
38849566063dSJacob Faibussowitsch   PetscCall(PetscDrawSetTitle(draw, "(norm -oldnorm)/oldnorm"));
3885b271bb04SBarry Smith   x = (PetscReal)n;
3886b271bb04SBarry Smith   y = (prev - rnorm) / prev;
38879566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGAddPoint(lg, &x, &y));
38886934998bSLisandro Dalcin   if (n < 20 || !(n % 5) || snes->reason) {
38899566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGDraw(lg));
38909566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGSave(lg));
3891b271bb04SBarry Smith   }
3892b271bb04SBarry Smith 
38939566063dSJacob Faibussowitsch   PetscCall(PetscViewerDrawGetDrawLG(v, 3, &lg));
38949566063dSJacob Faibussowitsch   if (!n) PetscCall(PetscDrawLGReset(lg));
38959566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGGetDraw(lg, &draw));
38969566063dSJacob Faibussowitsch   PetscCall(PetscDrawSetTitle(draw, "(norm -oldnorm)/oldnorm*(% > .2 max)"));
3897b271bb04SBarry Smith   x = (PetscReal)n;
3898b271bb04SBarry Smith   y = (prev - rnorm) / (prev * per);
3899b271bb04SBarry Smith   if (n > 2) { /*skip initial crazy value */
39009566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGAddPoint(lg, &x, &y));
3901b271bb04SBarry Smith   }
39026934998bSLisandro Dalcin   if (n < 20 || !(n % 5) || snes->reason) {
39039566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGDraw(lg));
39049566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGSave(lg));
3905b271bb04SBarry Smith   }
3906b271bb04SBarry Smith   prev = rnorm;
39073ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3908b271bb04SBarry Smith }
3909b271bb04SBarry Smith 
3910228d79bcSJed Brown /*@
39112d157150SStefano Zampini   SNESConverged - Run the convergence test and update the `SNESConvergedReason`.
39122d157150SStefano Zampini 
39132d157150SStefano Zampini   Collective
39142d157150SStefano Zampini 
39152d157150SStefano Zampini   Input Parameters:
39162d157150SStefano Zampini + snes  - the `SNES` context
39172d157150SStefano Zampini . it    - current iteration
39182d157150SStefano Zampini . xnorm - 2-norm of current iterate
39192d157150SStefano Zampini . snorm - 2-norm of current step
39202d157150SStefano Zampini - fnorm - 2-norm of function
39212d157150SStefano Zampini 
39222d157150SStefano Zampini   Level: developer
39232d157150SStefano Zampini 
39242d157150SStefano Zampini   Note:
3925420bcc1bSBarry Smith   This routine is called by the `SNESSolve()` implementations.
39262d157150SStefano Zampini   It does not typically need to be called by the user.
39272d157150SStefano Zampini 
3928be50c303SSatish Balay .seealso: [](ch_snes), `SNES`, `SNESSolve`, `SNESSetConvergenceTest()`, `SNESGetConvergenceTest()`
39292d157150SStefano Zampini @*/
39302d157150SStefano Zampini PetscErrorCode SNESConverged(SNES snes, PetscInt it, PetscReal xnorm, PetscReal snorm, PetscReal fnorm)
39312d157150SStefano Zampini {
39322d157150SStefano Zampini   PetscFunctionBegin;
39332d157150SStefano Zampini   if (!snes->reason) {
39342d157150SStefano Zampini     if (snes->normschedule == SNES_NORM_ALWAYS) PetscUseTypeMethod(snes, converged, it, xnorm, snorm, fnorm, &snes->reason, snes->cnvP);
39352d157150SStefano Zampini     if (it == snes->max_its && !snes->reason) {
39362d157150SStefano Zampini       if (snes->normschedule == SNES_NORM_ALWAYS) {
39372d157150SStefano Zampini         PetscCall(PetscInfo(snes, "Maximum number of iterations has been reached: %" PetscInt_FMT "\n", snes->max_its));
39382d157150SStefano Zampini         snes->reason = SNES_DIVERGED_MAX_IT;
39392d157150SStefano Zampini       } else snes->reason = SNES_CONVERGED_ITS;
39402d157150SStefano Zampini     }
39412d157150SStefano Zampini   }
39422d157150SStefano Zampini   PetscFunctionReturn(PETSC_SUCCESS);
39432d157150SStefano Zampini }
39442d157150SStefano Zampini 
39452d157150SStefano Zampini /*@
3946228d79bcSJed Brown   SNESMonitor - runs the user provided monitor routines, if they exist
3947228d79bcSJed Brown 
3948c3339decSBarry Smith   Collective
3949228d79bcSJed Brown 
3950228d79bcSJed Brown   Input Parameters:
3951f6dfbefdSBarry Smith + snes  - nonlinear solver context obtained from `SNESCreate()`
3952228d79bcSJed Brown . iter  - iteration number
3953228d79bcSJed Brown - rnorm - relative norm of the residual
3954228d79bcSJed Brown 
3955dc4c0fb0SBarry Smith   Level: developer
3956dc4c0fb0SBarry Smith 
3957f6dfbefdSBarry Smith   Note:
3958420bcc1bSBarry Smith   This routine is called by the `SNESSolve()` implementations.
3959228d79bcSJed Brown   It does not typically need to be called by the user.
3960228d79bcSJed Brown 
39611cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESMonitorSet()`
3962228d79bcSJed Brown @*/
3963d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESMonitor(SNES snes, PetscInt iter, PetscReal rnorm)
3964d71ae5a4SJacob Faibussowitsch {
39657a03ce2fSLisandro Dalcin   PetscInt i, n = snes->numbermonitors;
39667a03ce2fSLisandro Dalcin 
39677a03ce2fSLisandro Dalcin   PetscFunctionBegin;
39685f3c5e7aSBarry Smith   if (n > 0) SNESCheckFunctionNorm(snes, rnorm);
39699566063dSJacob Faibussowitsch   PetscCall(VecLockReadPush(snes->vec_sol));
397048a46eb9SPierre Jolivet   for (i = 0; i < n; i++) PetscCall((*snes->monitor[i])(snes, iter, rnorm, snes->monitorcontext[i]));
39719566063dSJacob Faibussowitsch   PetscCall(VecLockReadPop(snes->vec_sol));
39723ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
39737a03ce2fSLisandro Dalcin }
39747a03ce2fSLisandro Dalcin 
39759b94acceSBarry Smith /* ------------ Routines to set performance monitoring options ----------- */
39769b94acceSBarry Smith 
3977bf388a1fSBarry Smith /*MC
3978f6dfbefdSBarry Smith     SNESMonitorFunction - functional form passed to `SNESMonitorSet()` to monitor convergence of nonlinear solver
3979bf388a1fSBarry Smith 
3980bf388a1fSBarry Smith      Synopsis:
3981aaa7dc30SBarry Smith      #include <petscsnes.h>
398237fdd005SBarry Smith     PetscErrorCode SNESMonitorFunction(SNES snes, PetscInt its, PetscReal norm, void *mctx)
3983bf388a1fSBarry Smith 
3984c3339decSBarry Smith      Collective
39851843f636SBarry Smith 
39861843f636SBarry Smith     Input Parameters:
3987f6dfbefdSBarry Smith +    snes - the `SNES` context
3988bf388a1fSBarry Smith .    its - iteration number
3989bf388a1fSBarry Smith .    norm - 2-norm function value (may be estimated)
3990bf388a1fSBarry Smith -    mctx - [optional] monitoring context
3991bf388a1fSBarry Smith 
3992878cb397SSatish Balay    Level: advanced
3993878cb397SSatish Balay 
39941cc06b55SBarry Smith .seealso: [](ch_snes), `SNESMonitorSet()`, `SNESMonitorSet()`, `SNESMonitorGet()`
3995bf388a1fSBarry Smith M*/
3996bf388a1fSBarry Smith 
39979b94acceSBarry Smith /*@C
3998a6570f20SBarry Smith   SNESMonitorSet - Sets an ADDITIONAL function that is to be used at every
39999b94acceSBarry Smith   iteration of the nonlinear solver to display the iteration's
40009b94acceSBarry Smith   progress.
40019b94acceSBarry Smith 
4002c3339decSBarry Smith   Logically Collective
4003fee21e36SBarry Smith 
4004c7afd0dbSLois Curfman McInnes   Input Parameters:
4005f6dfbefdSBarry Smith + snes           - the `SNES` context
400620f4b53cSBarry Smith . f              - the monitor function,  for the calling sequence see `SNESMonitorFunction`
4007420bcc1bSBarry Smith . mctx           - [optional] user-defined context for private data for the monitor routine (use `NULL` if no context is desired)
4008dc4c0fb0SBarry Smith - monitordestroy - [optional] routine that frees monitor context (may be `NULL`)
40099b94acceSBarry Smith 
40109665c990SLois Curfman McInnes   Options Database Keys:
4011f6dfbefdSBarry Smith + -snes_monitor               - sets `SNESMonitorDefault()`
4012798534f6SMatthew G. Knepley . -snes_monitor draw::draw_lg - sets line graph monitor,
4013dc4c0fb0SBarry Smith - -snes_monitor_cancel        - cancels all monitors that have been hardwired into a code by calls to `SNESMonitorSet()`, but does not cancel those set via
4014c7afd0dbSLois Curfman McInnes                             the options database.
40159665c990SLois Curfman McInnes 
4016dc4c0fb0SBarry Smith   Level: intermediate
4017dc4c0fb0SBarry Smith 
4018f6dfbefdSBarry Smith   Note:
40196bc08f3fSLois Curfman McInnes   Several different monitoring routines may be set by calling
4020f6dfbefdSBarry Smith   `SNESMonitorSet()` multiple times; all will be called in the
40216bc08f3fSLois Curfman McInnes   order in which they were set.
4022639f9d9dSBarry Smith 
4023420bcc1bSBarry Smith   Fortran Note:
4024f6dfbefdSBarry Smith   Only a single monitor function can be set for each `SNES` object
4025025f1a04SBarry Smith 
40261cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESMonitorDefault()`, `SNESMonitorCancel()`, `SNESMonitorFunction`
40279b94acceSBarry Smith @*/
4028d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESMonitorSet(SNES snes, PetscErrorCode (*f)(SNES, PetscInt, PetscReal, void *), void *mctx, PetscErrorCode (*monitordestroy)(void **))
4029d71ae5a4SJacob Faibussowitsch {
4030b90d0a6eSBarry Smith   PetscInt  i;
403178064530SBarry Smith   PetscBool identical;
4032b90d0a6eSBarry Smith 
40333a40ed3dSBarry Smith   PetscFunctionBegin;
40340700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4035b90d0a6eSBarry Smith   for (i = 0; i < snes->numbermonitors; i++) {
40369566063dSJacob Faibussowitsch     PetscCall(PetscMonitorCompare((PetscErrorCode(*)(void))f, mctx, monitordestroy, (PetscErrorCode(*)(void))snes->monitor[i], snes->monitorcontext[i], snes->monitordestroy[i], &identical));
40373ba16761SJacob Faibussowitsch     if (identical) PetscFunctionReturn(PETSC_SUCCESS);
4038649052a6SBarry Smith   }
40395f80ce2aSJacob Faibussowitsch   PetscCheck(snes->numbermonitors < MAXSNESMONITORS, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Too many monitors set");
40406e4dcb14SBarry Smith   snes->monitor[snes->numbermonitors]          = f;
4041b8a78c4aSBarry Smith   snes->monitordestroy[snes->numbermonitors]   = monitordestroy;
4042639f9d9dSBarry Smith   snes->monitorcontext[snes->numbermonitors++] = (void *)mctx;
40433ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
40449b94acceSBarry Smith }
40459b94acceSBarry Smith 
4046a278d85bSSatish Balay /*@
4047f6dfbefdSBarry Smith   SNESMonitorCancel - Clears all the monitor functions for a `SNES` object.
40485cd90555SBarry Smith 
4049c3339decSBarry Smith   Logically Collective
4050c7afd0dbSLois Curfman McInnes 
40512fe279fdSBarry Smith   Input Parameter:
4052f6dfbefdSBarry Smith . snes - the `SNES` context
40535cd90555SBarry Smith 
40541a480d89SAdministrator   Options Database Key:
4055a6570f20SBarry Smith . -snes_monitor_cancel - cancels all monitors that have been hardwired
4056dc4c0fb0SBarry Smith     into a code by calls to `SNESMonitorSet()`, but does not cancel those
4057c7afd0dbSLois Curfman McInnes     set via the options database
40585cd90555SBarry Smith 
4059dc4c0fb0SBarry Smith   Level: intermediate
4060dc4c0fb0SBarry Smith 
4061f6dfbefdSBarry Smith   Note:
4062f6dfbefdSBarry Smith   There is no way to clear one specific monitor from a `SNES` object.
40635cd90555SBarry Smith 
40641cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESMonitorGet()`, `SNESMonitorDefault()`, `SNESMonitorSet()`
40655cd90555SBarry Smith @*/
4066d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESMonitorCancel(SNES snes)
4067d71ae5a4SJacob Faibussowitsch {
4068d952e501SBarry Smith   PetscInt i;
4069d952e501SBarry Smith 
40705cd90555SBarry Smith   PetscFunctionBegin;
40710700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4072d952e501SBarry Smith   for (i = 0; i < snes->numbermonitors; i++) {
407348a46eb9SPierre Jolivet     if (snes->monitordestroy[i]) PetscCall((*snes->monitordestroy[i])(&snes->monitorcontext[i]));
4074d952e501SBarry Smith   }
40755cd90555SBarry Smith   snes->numbermonitors = 0;
40763ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
40775cd90555SBarry Smith }
40785cd90555SBarry Smith 
4079bf388a1fSBarry Smith /*MC
4080bf388a1fSBarry Smith     SNESConvergenceTestFunction - functional form used for testing of convergence of nonlinear solver
4081bf388a1fSBarry Smith 
4082bf388a1fSBarry Smith      Synopsis:
4083aaa7dc30SBarry Smith      #include <petscsnes.h>
408437fdd005SBarry Smith      PetscErrorCode SNESConvergenceTest(SNES snes, PetscInt it, PetscReal xnorm, PetscReal gnorm, PetscReal f, SNESConvergedReason *reason, void *cctx)
4085bf388a1fSBarry Smith 
4086c3339decSBarry Smith      Collective
40871843f636SBarry Smith 
40881843f636SBarry Smith     Input Parameters:
4089f6dfbefdSBarry Smith +    snes - the `SNES` context
4090bf388a1fSBarry Smith .    it - current iteration (0 is the first and is before any Newton step)
4091bf388a1fSBarry Smith .    xnorm - 2-norm of current iterate
4092bf388a1fSBarry Smith .    gnorm - 2-norm of current step
40931843f636SBarry Smith .    f - 2-norm of function
40941843f636SBarry Smith -    cctx - [optional] convergence context
40951843f636SBarry Smith 
40961843f636SBarry Smith     Output Parameter:
40971843f636SBarry Smith .    reason - reason for convergence/divergence, only needs to be set when convergence or divergence is detected
4098bf388a1fSBarry Smith 
4099878cb397SSatish Balay    Level: intermediate
4100bf388a1fSBarry Smith 
41011cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve`, `SNESSetConvergenceTest()`, `SNESGetConvergenceTest()`
4102bf388a1fSBarry Smith M*/
4103bf388a1fSBarry Smith 
41049b94acceSBarry Smith /*@C
41059b94acceSBarry Smith   SNESSetConvergenceTest - Sets the function that is to be used
41069b94acceSBarry Smith   to test for convergence of the nonlinear iterative solution.
41079b94acceSBarry Smith 
4108c3339decSBarry Smith   Logically Collective
4109fee21e36SBarry Smith 
4110c7afd0dbSLois Curfman McInnes   Input Parameters:
4111f6dfbefdSBarry Smith + snes                        - the `SNES` context
4112e4094ef1SJacob Faibussowitsch . SNESConvergenceTestFunction - routine to test for convergence
4113dc4c0fb0SBarry Smith . cctx                        - [optional] context for private data for the convergence routine  (may be `NULL`)
4114dc4c0fb0SBarry Smith - destroy                     - [optional] destructor for the context (may be `NULL`; `PETSC_NULL_FUNCTION` in Fortran)
41159b94acceSBarry Smith 
411636851e7fSLois Curfman McInnes   Level: advanced
411736851e7fSLois Curfman McInnes 
41181cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESConvergedDefault()`, `SNESConvergedSkip()`, `SNESConvergenceTestFunction`
41199b94acceSBarry Smith @*/
4120d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetConvergenceTest(SNES snes, PetscErrorCode (*SNESConvergenceTestFunction)(SNES, PetscInt, PetscReal, PetscReal, PetscReal, SNESConvergedReason *, void *), void *cctx, PetscErrorCode (*destroy)(void *))
4121d71ae5a4SJacob Faibussowitsch {
41223a40ed3dSBarry Smith   PetscFunctionBegin;
41230700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4124e2a6519dSDmitry Karpeev   if (!SNESConvergenceTestFunction) SNESConvergenceTestFunction = SNESConvergedSkip;
41251baa6e33SBarry Smith   if (snes->ops->convergeddestroy) PetscCall((*snes->ops->convergeddestroy)(snes->cnvP));
4126bf388a1fSBarry Smith   snes->ops->converged        = SNESConvergenceTestFunction;
41277f7931b9SBarry Smith   snes->ops->convergeddestroy = destroy;
412885385478SLisandro Dalcin   snes->cnvP                  = cctx;
41293ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
41309b94acceSBarry Smith }
41319b94acceSBarry Smith 
413252baeb72SSatish Balay /*@
4133f6dfbefdSBarry Smith   SNESGetConvergedReason - Gets the reason the `SNES` iteration was stopped.
4134184914b5SBarry Smith 
4135184914b5SBarry Smith   Not Collective
4136184914b5SBarry Smith 
4137184914b5SBarry Smith   Input Parameter:
4138f6dfbefdSBarry Smith . snes - the `SNES` context
4139184914b5SBarry Smith 
4140184914b5SBarry Smith   Output Parameter:
4141f6dfbefdSBarry Smith . reason - negative value indicates diverged, positive value converged, see `SNESConvergedReason` for the individual convergence tests for complete lists
4142184914b5SBarry Smith 
4143f6dfbefdSBarry Smith   Options Database Key:
41446a4d7782SBarry Smith . -snes_converged_reason - prints the reason to standard out
41456a4d7782SBarry Smith 
4146184914b5SBarry Smith   Level: intermediate
4147184914b5SBarry Smith 
4148f6dfbefdSBarry Smith   Note:
4149f6dfbefdSBarry Smith   Should only be called after the call the `SNESSolve()` is complete, if it is called earlier it returns the value `SNES__CONVERGED_ITERATING`.
4150184914b5SBarry Smith 
41511cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSolve()`, `SNESSetConvergenceTest()`, `SNESSetConvergedReason()`, `SNESConvergedReason`, `SNESGetConvergedReasonString()`
4152184914b5SBarry Smith @*/
4153d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetConvergedReason(SNES snes, SNESConvergedReason *reason)
4154d71ae5a4SJacob Faibussowitsch {
4155184914b5SBarry Smith   PetscFunctionBegin;
41560700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
41574f572ea9SToby Isaac   PetscAssertPointer(reason, 2);
4158184914b5SBarry Smith   *reason = snes->reason;
41593ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4160184914b5SBarry Smith }
4161184914b5SBarry Smith 
4162c4421ceaSFande Kong /*@C
4163f6dfbefdSBarry Smith   SNESGetConvergedReasonString - Return a human readable string for `SNESConvergedReason`
4164c4421ceaSFande Kong 
4165c4421ceaSFande Kong   Not Collective
4166c4421ceaSFande Kong 
4167c4421ceaSFande Kong   Input Parameter:
4168f6dfbefdSBarry Smith . snes - the `SNES` context
4169c4421ceaSFande Kong 
4170c4421ceaSFande Kong   Output Parameter:
4171dc4c0fb0SBarry Smith . strreason - a human readable string that describes `SNES` converged reason
4172c4421ceaSFande Kong 
417399c90e12SSatish Balay   Level: beginner
4174c4421ceaSFande Kong 
41751cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetConvergedReason()`
4176c4421ceaSFande Kong @*/
4177d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetConvergedReasonString(SNES snes, const char **strreason)
4178d71ae5a4SJacob Faibussowitsch {
4179c4421ceaSFande Kong   PetscFunctionBegin;
4180c4421ceaSFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
41814f572ea9SToby Isaac   PetscAssertPointer(strreason, 2);
4182c4421ceaSFande Kong   *strreason = SNESConvergedReasons[snes->reason];
41833ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4184c4421ceaSFande Kong }
4185c4421ceaSFande Kong 
418633866048SMatthew G. Knepley /*@
4187f6dfbefdSBarry Smith   SNESSetConvergedReason - Sets the reason the `SNES` iteration was stopped.
418833866048SMatthew G. Knepley 
418933866048SMatthew G. Knepley   Not Collective
419033866048SMatthew G. Knepley 
419133866048SMatthew G. Knepley   Input Parameters:
4192f6dfbefdSBarry Smith + snes   - the `SNES` context
4193f6dfbefdSBarry Smith - reason - negative value indicates diverged, positive value converged, see `SNESConvergedReason` or the
419433866048SMatthew G. Knepley             manual pages for the individual convergence tests for complete lists
419533866048SMatthew G. Knepley 
4196f6dfbefdSBarry Smith   Level: developer
4197f6dfbefdSBarry Smith 
4198420bcc1bSBarry Smith   Developer Note:
4199f6dfbefdSBarry Smith   Called inside the various `SNESSolve()` implementations
420033866048SMatthew G. Knepley 
42011cc06b55SBarry Smith .seealso: [](ch_snes), `SNESGetConvergedReason()`, `SNESSetConvergenceTest()`, `SNESConvergedReason`
420233866048SMatthew G. Knepley @*/
4203d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetConvergedReason(SNES snes, SNESConvergedReason reason)
4204d71ae5a4SJacob Faibussowitsch {
420533866048SMatthew G. Knepley   PetscFunctionBegin;
420633866048SMatthew G. Knepley   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
42075f3c5e7aSBarry Smith   PetscCheck(!snes->errorifnotconverged || reason > 0, PetscObjectComm((PetscObject)snes), PETSC_ERR_PLIB, "SNES code should have previously errored due to negative reason");
420833866048SMatthew G. Knepley   snes->reason = reason;
42093ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
421033866048SMatthew G. Knepley }
421133866048SMatthew G. Knepley 
4212c9005455SLois Curfman McInnes /*@
4213420bcc1bSBarry Smith   SNESSetConvergenceHistory - Sets the arrays used to hold the convergence history.
4214c9005455SLois Curfman McInnes 
4215c3339decSBarry Smith   Logically Collective
4216fee21e36SBarry Smith 
4217c7afd0dbSLois Curfman McInnes   Input Parameters:
4218f6dfbefdSBarry Smith + snes  - iterative context obtained from `SNESCreate()`
42198c7482ecSBarry Smith . a     - array to hold history, this array will contain the function norms computed at each step
4220cd5578b5SBarry Smith . its   - integer array holds the number of linear iterations for each solve.
4221420bcc1bSBarry Smith . na    - size of `a` and `its`
4222f6dfbefdSBarry Smith - reset - `PETSC_TRUE` indicates each new nonlinear solve resets the history counter to zero,
4223758f92a0SBarry Smith            else it continues storing new values for new nonlinear solves after the old ones
4224c7afd0dbSLois Curfman McInnes 
4225dc4c0fb0SBarry Smith   Level: intermediate
4226dc4c0fb0SBarry Smith 
4227308dcc3eSBarry Smith   Notes:
4228dc4c0fb0SBarry Smith   If 'a' and 'its' are `NULL` then space is allocated for the history. If 'na' `PETSC_DECIDE` or `PETSC_DEFAULT` then a
4229308dcc3eSBarry Smith   default array of length 10000 is allocated.
4230308dcc3eSBarry Smith 
4231c9005455SLois Curfman McInnes   This routine is useful, e.g., when running a code for purposes
4232c9005455SLois Curfman McInnes   of accurate performance monitoring, when no I/O should be done
4233c9005455SLois Curfman McInnes   during the section of code that is being timed.
4234c9005455SLois Curfman McInnes 
4235420bcc1bSBarry Smith   If the arrays run out of space after a number of iterations then the later values are not saved in the history
4236420bcc1bSBarry Smith 
42371cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESGetConvergenceHistory()`
4238c9005455SLois Curfman McInnes @*/
4239d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetConvergenceHistory(SNES snes, PetscReal a[], PetscInt its[], PetscInt na, PetscBool reset)
4240d71ae5a4SJacob Faibussowitsch {
42413a40ed3dSBarry Smith   PetscFunctionBegin;
42420700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
42434f572ea9SToby Isaac   if (a) PetscAssertPointer(a, 2);
42444f572ea9SToby Isaac   if (its) PetscAssertPointer(its, 3);
42457a1ec6d4SBarry Smith   if (!a) {
4246308dcc3eSBarry Smith     if (na == PETSC_DECIDE || na == PETSC_DEFAULT) na = 1000;
42479566063dSJacob Faibussowitsch     PetscCall(PetscCalloc2(na, &a, na, &its));
4248071fcb05SBarry Smith     snes->conv_hist_alloc = PETSC_TRUE;
4249308dcc3eSBarry Smith   }
4250c9005455SLois Curfman McInnes   snes->conv_hist       = a;
4251758f92a0SBarry Smith   snes->conv_hist_its   = its;
4252115dd874SBarry Smith   snes->conv_hist_max   = (size_t)na;
4253a12bc48fSLisandro Dalcin   snes->conv_hist_len   = 0;
4254758f92a0SBarry Smith   snes->conv_hist_reset = reset;
42553ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4256758f92a0SBarry Smith }
4257758f92a0SBarry Smith 
4258d1e78c4fSBarry Smith #if defined(PETSC_HAVE_MATLAB)
4259c6db04a5SJed Brown   #include <engine.h> /* MATLAB include file */
4260c6db04a5SJed Brown   #include <mex.h>    /* MATLAB include file */
426199e0435eSBarry Smith 
4262d71ae5a4SJacob Faibussowitsch PETSC_EXTERN mxArray *SNESGetConvergenceHistoryMatlab(SNES snes)
4263d71ae5a4SJacob Faibussowitsch {
4264308dcc3eSBarry Smith   mxArray   *mat;
4265308dcc3eSBarry Smith   PetscInt   i;
4266308dcc3eSBarry Smith   PetscReal *ar;
4267308dcc3eSBarry Smith 
4268308dcc3eSBarry Smith   mat = mxCreateDoubleMatrix(snes->conv_hist_len, 1, mxREAL);
4269308dcc3eSBarry Smith   ar  = (PetscReal *)mxGetData(mat);
4270f5af7f23SKarl Rupp   for (i = 0; i < snes->conv_hist_len; i++) ar[i] = snes->conv_hist[i];
427111cc89d2SBarry Smith   return mat;
4272308dcc3eSBarry Smith }
4273308dcc3eSBarry Smith #endif
4274308dcc3eSBarry Smith 
42750c4c9dddSBarry Smith /*@C
4276420bcc1bSBarry Smith   SNESGetConvergenceHistory - Gets the arrays used to hold the convergence history.
4277758f92a0SBarry Smith 
42783f9fe445SBarry Smith   Not Collective
4279758f92a0SBarry Smith 
4280758f92a0SBarry Smith   Input Parameter:
4281f6dfbefdSBarry Smith . snes - iterative context obtained from `SNESCreate()`
4282758f92a0SBarry Smith 
4283758f92a0SBarry Smith   Output Parameters:
4284f6dfbefdSBarry Smith + a   - array to hold history, usually was set with `SNESSetConvergenceHistory()`
4285758f92a0SBarry Smith . its - integer array holds the number of linear iterations (or
4286758f92a0SBarry Smith          negative if not converged) for each solve.
428720f4b53cSBarry Smith - na  - size of `a` and `its`
4288758f92a0SBarry Smith 
4289dc4c0fb0SBarry Smith   Level: intermediate
4290dc4c0fb0SBarry Smith 
429120f4b53cSBarry Smith   Note:
429220f4b53cSBarry Smith   This routine is useful, e.g., when running a code for purposes
429320f4b53cSBarry Smith   of accurate performance monitoring, when no I/O should be done
429420f4b53cSBarry Smith   during the section of code that is being timed.
429520f4b53cSBarry Smith 
4296420bcc1bSBarry Smith   Fortran Note:
4297758f92a0SBarry Smith   The calling sequence for this routine in Fortran is
4298dc4c0fb0SBarry Smith .vb
4299dc4c0fb0SBarry Smith     call SNESGetConvergenceHistory(SNES snes, integer na, integer ierr)
4300dc4c0fb0SBarry Smith .ve
4301758f92a0SBarry Smith 
43021cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetConvergenceHistory()`
4303758f92a0SBarry Smith @*/
4304d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetConvergenceHistory(SNES snes, PetscReal *a[], PetscInt *its[], PetscInt *na)
4305d71ae5a4SJacob Faibussowitsch {
4306758f92a0SBarry Smith   PetscFunctionBegin;
43070700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4308758f92a0SBarry Smith   if (a) *a = snes->conv_hist;
4309758f92a0SBarry Smith   if (its) *its = snes->conv_hist_its;
4310115dd874SBarry Smith   if (na) *na = (PetscInt)snes->conv_hist_len;
43113ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4312c9005455SLois Curfman McInnes }
4313c9005455SLois Curfman McInnes 
4314ac226902SBarry Smith /*@C
431576b2cf59SMatthew Knepley   SNESSetUpdate - Sets the general-purpose update function called
4316eec8f646SJed Brown   at the beginning of every iteration of the nonlinear solve. Specifically
43177e4bb74cSBarry Smith   it is called just before the Jacobian is "evaluated".
431876b2cf59SMatthew Knepley 
4319c3339decSBarry Smith   Logically Collective
432076b2cf59SMatthew Knepley 
432176b2cf59SMatthew Knepley   Input Parameters:
4322a2b725a8SWilliam Gropp + snes - The nonlinear solver context
4323a2b725a8SWilliam Gropp - func - The function
432476b2cf59SMatthew Knepley 
432520f4b53cSBarry Smith   Calling sequence of `func`:
432620f4b53cSBarry Smith + snes - the nonlinear solver context
432720f4b53cSBarry Smith - step - The current step of the iteration
432876b2cf59SMatthew Knepley 
4329fe97e370SBarry Smith   Level: advanced
4330fe97e370SBarry Smith 
4331420bcc1bSBarry Smith   Notes:
4332f6dfbefdSBarry Smith   This is NOT what one uses to update the ghost points before a function evaluation, that should be done at the beginning of your function provided
4333f6dfbefdSBarry Smith   to `SNESSetFunction()`, or `SNESSetPicard()`
4334fe97e370SBarry Smith   This is not used by most users.
433576b2cf59SMatthew Knepley 
4336aaa8cc7dSPierre Jolivet   There are a variety of function hooks one many set that are called at different stages of the nonlinear solution process, see the functions listed below.
43376b7fb656SBarry Smith 
4338e4094ef1SJacob Faibussowitsch .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetJacobian()`, `SNESLineSearchSetPreCheck()`, `SNESLineSearchSetPostCheck()`, `SNESNewtonTRSetPreCheck()`, `SNESNewtonTRSetPostCheck()`,
4339db781477SPatrick Sanan          `SNESMonitorSet()`, `SNESSetDivergenceTest()`
434076b2cf59SMatthew Knepley @*/
43410b4db180SJacob Faibussowitsch PetscErrorCode SNESSetUpdate(SNES snes, PetscErrorCode (*func)(SNES snes, PetscInt step))
4342d71ae5a4SJacob Faibussowitsch {
434376b2cf59SMatthew Knepley   PetscFunctionBegin;
43440700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4345e7788613SBarry Smith   snes->ops->update = func;
43463ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
434776b2cf59SMatthew Knepley }
434876b2cf59SMatthew Knepley 
434991f3e32bSBarry Smith /*@C
4350f6dfbefdSBarry Smith   SNESConvergedReasonView - Displays the reason a `SNES` solve converged or diverged to a viewer
43512a359c20SBarry Smith 
4352c3339decSBarry Smith   Collective
43532a359c20SBarry Smith 
4354e4094ef1SJacob Faibussowitsch   Input Parameters:
4355f6dfbefdSBarry Smith + snes   - iterative context obtained from `SNESCreate()`
43562a359c20SBarry Smith - viewer - the viewer to display the reason
43572a359c20SBarry Smith 
43582a359c20SBarry Smith   Options Database Keys:
4359ee300463SSatish Balay + -snes_converged_reason          - print reason for converged or diverged, also prints number of iterations
4360ee300463SSatish Balay - -snes_converged_reason ::failed - only print reason and number of iterations when diverged
4361eafd5ff0SAlex Lindsay 
4362420bcc1bSBarry Smith   Level: beginner
4363420bcc1bSBarry Smith 
4364f6dfbefdSBarry Smith   Note:
4365f6dfbefdSBarry Smith   To change the format of the output call `PetscViewerPushFormat`(viewer,format) before this call. Use `PETSC_VIEWER_DEFAULT` for the default,
4366f6dfbefdSBarry Smith   use `PETSC_VIEWER_FAILED` to only display a reason if it fails.
43672a359c20SBarry Smith 
43681cc06b55SBarry Smith .seealso: [](ch_snes), `SNESConvergedReason`, `PetscViewer`, `SNES`,
4369f6dfbefdSBarry Smith           `SNESCreate()`, `SNESSetUp()`, `SNESDestroy()`, `SNESSetTolerances()`, `SNESConvergedDefault()`, `SNESGetConvergedReason()`,
4370f6dfbefdSBarry Smith           `SNESConvergedReasonViewFromOptions()`,
4371db781477SPatrick Sanan           `PetscViewerPushFormat()`, `PetscViewerPopFormat()`
43722a359c20SBarry Smith @*/
4373d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESConvergedReasonView(SNES snes, PetscViewer viewer)
4374d71ae5a4SJacob Faibussowitsch {
437575cca76cSMatthew G. Knepley   PetscViewerFormat format;
43762a359c20SBarry Smith   PetscBool         isAscii;
43772a359c20SBarry Smith 
43782a359c20SBarry Smith   PetscFunctionBegin;
437919a666eeSBarry Smith   if (!viewer) viewer = PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)snes));
43809566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &isAscii));
43812a359c20SBarry Smith   if (isAscii) {
43829566063dSJacob Faibussowitsch     PetscCall(PetscViewerGetFormat(viewer, &format));
43839566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIAddTab(viewer, ((PetscObject)snes)->tablevel));
438475cca76cSMatthew G. Knepley     if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
438575cca76cSMatthew G. Knepley       DM       dm;
438675cca76cSMatthew G. Knepley       Vec      u;
438775cca76cSMatthew G. Knepley       PetscDS  prob;
438875cca76cSMatthew G. Knepley       PetscInt Nf, f;
438995cbbfd3SMatthew G. Knepley       PetscErrorCode (**exactSol)(PetscInt, PetscReal, const PetscReal[], PetscInt, PetscScalar[], void *);
439095cbbfd3SMatthew G. Knepley       void    **exactCtx;
439175cca76cSMatthew G. Knepley       PetscReal error;
439275cca76cSMatthew G. Knepley 
43939566063dSJacob Faibussowitsch       PetscCall(SNESGetDM(snes, &dm));
43949566063dSJacob Faibussowitsch       PetscCall(SNESGetSolution(snes, &u));
43959566063dSJacob Faibussowitsch       PetscCall(DMGetDS(dm, &prob));
43969566063dSJacob Faibussowitsch       PetscCall(PetscDSGetNumFields(prob, &Nf));
43979566063dSJacob Faibussowitsch       PetscCall(PetscMalloc2(Nf, &exactSol, Nf, &exactCtx));
43989566063dSJacob Faibussowitsch       for (f = 0; f < Nf; ++f) PetscCall(PetscDSGetExactSolution(prob, f, &exactSol[f], &exactCtx[f]));
43999566063dSJacob Faibussowitsch       PetscCall(DMComputeL2Diff(dm, 0.0, exactSol, exactCtx, u, &error));
44009566063dSJacob Faibussowitsch       PetscCall(PetscFree2(exactSol, exactCtx));
44019566063dSJacob Faibussowitsch       if (error < 1.0e-11) PetscCall(PetscViewerASCIIPrintf(viewer, "L_2 Error: < 1.0e-11\n"));
440263a3b9bcSJacob Faibussowitsch       else PetscCall(PetscViewerASCIIPrintf(viewer, "L_2 Error: %g\n", (double)error));
440375cca76cSMatthew G. Knepley     }
4404eafd5ff0SAlex Lindsay     if (snes->reason > 0 && format != PETSC_VIEWER_FAILED) {
44052a359c20SBarry Smith       if (((PetscObject)snes)->prefix) {
440663a3b9bcSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "Nonlinear %s solve converged due to %s iterations %" PetscInt_FMT "\n", ((PetscObject)snes)->prefix, SNESConvergedReasons[snes->reason], snes->iter));
44072a359c20SBarry Smith       } else {
440863a3b9bcSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "Nonlinear solve converged due to %s iterations %" PetscInt_FMT "\n", SNESConvergedReasons[snes->reason], snes->iter));
44092a359c20SBarry Smith       }
4410eafd5ff0SAlex Lindsay     } else if (snes->reason <= 0) {
44112a359c20SBarry Smith       if (((PetscObject)snes)->prefix) {
441263a3b9bcSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "Nonlinear %s solve did not converge due to %s iterations %" PetscInt_FMT "\n", ((PetscObject)snes)->prefix, SNESConvergedReasons[snes->reason], snes->iter));
44132a359c20SBarry Smith       } else {
441463a3b9bcSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "Nonlinear solve did not converge due to %s iterations %" PetscInt_FMT "\n", SNESConvergedReasons[snes->reason], snes->iter));
44152a359c20SBarry Smith       }
44162a359c20SBarry Smith     }
44179566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIISubtractTab(viewer, ((PetscObject)snes)->tablevel));
44182a359c20SBarry Smith   }
44193ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
44202a359c20SBarry Smith }
44212a359c20SBarry Smith 
4422c4421ceaSFande Kong /*@C
4423c4421ceaSFande Kong   SNESConvergedReasonViewSet - Sets an ADDITIONAL function that is to be used at the
4424aaa8cc7dSPierre Jolivet   end of the nonlinear solver to display the convergence reason of the nonlinear solver.
4425c4421ceaSFande Kong 
4426c3339decSBarry Smith   Logically Collective
4427c4421ceaSFande Kong 
4428c4421ceaSFande Kong   Input Parameters:
4429f6dfbefdSBarry Smith + snes              - the `SNES` context
4430420bcc1bSBarry Smith . f                 - the `SNESConvergedReason` view function
4431420bcc1bSBarry Smith . vctx              - [optional] user-defined context for private data for the `SNESConvergedReason` view function (use `NULL` if no context is desired)
4432420bcc1bSBarry Smith - reasonviewdestroy - [optional] routine that frees the context (may be `NULL`)
4433420bcc1bSBarry Smith 
4434420bcc1bSBarry Smith   Calling sequence of `f`:
4435420bcc1bSBarry Smith + snes - the `SNES` context
4436420bcc1bSBarry Smith - vctx - [optional] user-defined context for private data for the function
4437420bcc1bSBarry Smith 
4438420bcc1bSBarry Smith   Calling sequence of `reasonviewerdestroy`:
4439420bcc1bSBarry Smith . vctx - [optional] user-defined context for private data for the function
4440c4421ceaSFande Kong 
4441c4421ceaSFande Kong   Options Database Keys:
4442f6dfbefdSBarry Smith + -snes_converged_reason             - sets a default `SNESConvergedReasonView()`
4443420bcc1bSBarry Smith - -snes_converged_reason_view_cancel - cancels all converged reason viewers that have been hardwired into a code by
4444420bcc1bSBarry Smith                             calls to `SNESConvergedReasonViewSet()`, but does not cancel those set via the options database.
4445c4421ceaSFande Kong 
4446dc4c0fb0SBarry Smith   Level: intermediate
4447dc4c0fb0SBarry Smith 
4448f6dfbefdSBarry Smith   Note:
4449c4421ceaSFande Kong   Several different converged reason view routines may be set by calling
4450f6dfbefdSBarry Smith   `SNESConvergedReasonViewSet()` multiple times; all will be called in the
4451c4421ceaSFande Kong   order in which they were set.
4452c4421ceaSFande Kong 
44531cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESConvergedReason`, `SNESGetConvergedReason()`, `SNESConvergedReasonView()`, `SNESConvergedReasonViewCancel()`
4454c4421ceaSFande Kong @*/
4455420bcc1bSBarry Smith PetscErrorCode SNESConvergedReasonViewSet(SNES snes, PetscErrorCode (*f)(SNES snes, void *vctx), void *vctx, PetscErrorCode (*reasonviewdestroy)(void **vctx))
4456d71ae5a4SJacob Faibussowitsch {
4457c4421ceaSFande Kong   PetscInt  i;
4458c4421ceaSFande Kong   PetscBool identical;
4459c4421ceaSFande Kong 
4460c4421ceaSFande Kong   PetscFunctionBegin;
4461c4421ceaSFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4462c4421ceaSFande Kong   for (i = 0; i < snes->numberreasonviews; i++) {
44639566063dSJacob Faibussowitsch     PetscCall(PetscMonitorCompare((PetscErrorCode(*)(void))f, vctx, reasonviewdestroy, (PetscErrorCode(*)(void))snes->reasonview[i], snes->reasonviewcontext[i], snes->reasonviewdestroy[i], &identical));
44643ba16761SJacob Faibussowitsch     if (identical) PetscFunctionReturn(PETSC_SUCCESS);
4465c4421ceaSFande Kong   }
44665f80ce2aSJacob Faibussowitsch   PetscCheck(snes->numberreasonviews < MAXSNESREASONVIEWS, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Too many SNES reasonview set");
4467c4421ceaSFande Kong   snes->reasonview[snes->numberreasonviews]          = f;
4468c4421ceaSFande Kong   snes->reasonviewdestroy[snes->numberreasonviews]   = reasonviewdestroy;
4469c4421ceaSFande Kong   snes->reasonviewcontext[snes->numberreasonviews++] = (void *)vctx;
44703ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4471c4421ceaSFande Kong }
4472c4421ceaSFande Kong 
447391f3e32bSBarry Smith /*@
4474420bcc1bSBarry Smith   SNESConvergedReasonViewFromOptions - Processes command line options to determine if/how a `SNESConvergedReason` is to be viewed at the end of `SNESSolve()`
4475c4421ceaSFande Kong   All the user-provided convergedReasonView routines will be involved as well, if they exist.
44762a359c20SBarry Smith 
4477c3339decSBarry Smith   Collective
44782a359c20SBarry Smith 
44792fe279fdSBarry Smith   Input Parameter:
4480f6dfbefdSBarry Smith . snes - the `SNES` object
44812a359c20SBarry Smith 
4482f6dfbefdSBarry Smith   Level: advanced
44832a359c20SBarry Smith 
44841cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESConvergedReason`, `SNESConvergedReasonViewSet()`, `SNESCreate()`, `SNESSetUp()`, `SNESDestroy()`,
4485f6dfbefdSBarry Smith           `SNESSetTolerances()`, `SNESConvergedDefault()`, `SNESGetConvergedReason()`, `SNESConvergedReasonView()`
44862a359c20SBarry Smith @*/
4487d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESConvergedReasonViewFromOptions(SNES snes)
4488d71ae5a4SJacob Faibussowitsch {
44892a359c20SBarry Smith   PetscViewer       viewer;
44902a359c20SBarry Smith   PetscBool         flg;
44912a359c20SBarry Smith   static PetscBool  incall = PETSC_FALSE;
44922a359c20SBarry Smith   PetscViewerFormat format;
4493c4421ceaSFande Kong   PetscInt          i;
44942a359c20SBarry Smith 
44952a359c20SBarry Smith   PetscFunctionBegin;
44963ba16761SJacob Faibussowitsch   if (incall) PetscFunctionReturn(PETSC_SUCCESS);
44972a359c20SBarry Smith   incall = PETSC_TRUE;
4498c4421ceaSFande Kong 
4499c4421ceaSFande Kong   /* All user-provided viewers are called first, if they exist. */
450048a46eb9SPierre Jolivet   for (i = 0; i < snes->numberreasonviews; i++) PetscCall((*snes->reasonview[i])(snes, snes->reasonviewcontext[i]));
4501c4421ceaSFande Kong 
4502c4421ceaSFande Kong   /* Call PETSc default routine if users ask for it */
45039566063dSJacob Faibussowitsch   PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_converged_reason", &viewer, &format, &flg));
45042a359c20SBarry Smith   if (flg) {
45059566063dSJacob Faibussowitsch     PetscCall(PetscViewerPushFormat(viewer, format));
45069566063dSJacob Faibussowitsch     PetscCall(SNESConvergedReasonView(snes, viewer));
45079566063dSJacob Faibussowitsch     PetscCall(PetscViewerPopFormat(viewer));
45089566063dSJacob Faibussowitsch     PetscCall(PetscViewerDestroy(&viewer));
45092a359c20SBarry Smith   }
45102a359c20SBarry Smith   incall = PETSC_FALSE;
45113ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
45122a359c20SBarry Smith }
45132a359c20SBarry Smith 
4514487a658cSBarry Smith /*@
4515f69a0ea3SMatthew Knepley   SNESSolve - Solves a nonlinear system F(x) = b.
45169b94acceSBarry Smith 
4517c3339decSBarry Smith   Collective
4518c7afd0dbSLois Curfman McInnes 
4519b2002411SLois Curfman McInnes   Input Parameters:
4520f6dfbefdSBarry Smith + snes - the `SNES` context
4521dc4c0fb0SBarry Smith . b    - the constant part of the equation F(x) = b, or `NULL` to use zero.
452285385478SLisandro Dalcin - x    - the solution vector.
45239b94acceSBarry Smith 
4524dc4c0fb0SBarry Smith   Level: beginner
4525dc4c0fb0SBarry Smith 
4526f6dfbefdSBarry Smith   Note:
4527420bcc1bSBarry Smith   The user should initialize the vector, `x`, with the initial guess
4528420bcc1bSBarry Smith   for the nonlinear solve prior to calling `SNESSolve()` or use `SNESSetInitialSolution()`.  In particular,
45298ddd3da0SLois Curfman McInnes   to employ an initial guess of zero, the user should explicitly set
4530f6dfbefdSBarry Smith   this vector to zero by calling `VecSet()`.
45318ddd3da0SLois Curfman McInnes 
45321cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESCreate()`, `SNESDestroy()`, `SNESSetFunction()`, `SNESSetJacobian()`, `SNESSetGridSequence()`, `SNESGetSolution()`,
4533db781477SPatrick Sanan           `SNESNewtonTRSetPreCheck()`, `SNESNewtonTRGetPreCheck()`, `SNESNewtonTRSetPostCheck()`, `SNESNewtonTRGetPostCheck()`,
4534420bcc1bSBarry Smith           `SNESLineSearchSetPostCheck()`, `SNESLineSearchGetPostCheck()`, `SNESLineSearchSetPreCheck()`, `SNESLineSearchGetPreCheck()`, `SNESSetInitialSolution()`
45359b94acceSBarry Smith @*/
4536d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSolve(SNES snes, Vec b, Vec x)
4537d71ae5a4SJacob Faibussowitsch {
4538ace3abfcSBarry Smith   PetscBool flg;
4539efd51863SBarry Smith   PetscInt  grid;
45400298fd71SBarry Smith   Vec       xcreated = NULL;
4541caa4e7f2SJed Brown   DM        dm;
4542052efed2SBarry Smith 
45433a40ed3dSBarry Smith   PetscFunctionBegin;
45440700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4545a69afd8bSBarry Smith   if (x) PetscValidHeaderSpecific(x, VEC_CLASSID, 3);
4546a69afd8bSBarry Smith   if (x) PetscCheckSameComm(snes, 1, x, 3);
45470700a824SBarry Smith   if (b) PetscValidHeaderSpecific(b, VEC_CLASSID, 2);
454885385478SLisandro Dalcin   if (b) PetscCheckSameComm(snes, 1, b, 2);
454985385478SLisandro Dalcin 
455034b4d3a8SMatthew G. Knepley   /* High level operations using the nonlinear solver */
455106fc46c8SMatthew G. Knepley   {
455206fc46c8SMatthew G. Knepley     PetscViewer       viewer;
455306fc46c8SMatthew G. Knepley     PetscViewerFormat format;
45547c88af5aSMatthew G. Knepley     PetscInt          num;
455506fc46c8SMatthew G. Knepley     PetscBool         flg;
455606fc46c8SMatthew G. Knepley     static PetscBool  incall = PETSC_FALSE;
455706fc46c8SMatthew G. Knepley 
455806fc46c8SMatthew G. Knepley     if (!incall) {
455934b4d3a8SMatthew G. Knepley       /* Estimate the convergence rate of the discretization */
45609566063dSJacob Faibussowitsch       PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_convergence_estimate", &viewer, &format, &flg));
456106fc46c8SMatthew G. Knepley       if (flg) {
456206fc46c8SMatthew G. Knepley         PetscConvEst conv;
456346079b62SMatthew G. Knepley         DM           dm;
456446079b62SMatthew G. Knepley         PetscReal   *alpha; /* Convergence rate of the solution error for each field in the L_2 norm */
456546079b62SMatthew G. Knepley         PetscInt     Nf;
456606fc46c8SMatthew G. Knepley 
456706fc46c8SMatthew G. Knepley         incall = PETSC_TRUE;
45689566063dSJacob Faibussowitsch         PetscCall(SNESGetDM(snes, &dm));
45699566063dSJacob Faibussowitsch         PetscCall(DMGetNumFields(dm, &Nf));
45709566063dSJacob Faibussowitsch         PetscCall(PetscCalloc1(Nf, &alpha));
45719566063dSJacob Faibussowitsch         PetscCall(PetscConvEstCreate(PetscObjectComm((PetscObject)snes), &conv));
45729566063dSJacob Faibussowitsch         PetscCall(PetscConvEstSetSolver(conv, (PetscObject)snes));
45739566063dSJacob Faibussowitsch         PetscCall(PetscConvEstSetFromOptions(conv));
45749566063dSJacob Faibussowitsch         PetscCall(PetscConvEstSetUp(conv));
45759566063dSJacob Faibussowitsch         PetscCall(PetscConvEstGetConvRate(conv, alpha));
45769566063dSJacob Faibussowitsch         PetscCall(PetscViewerPushFormat(viewer, format));
45779566063dSJacob Faibussowitsch         PetscCall(PetscConvEstRateView(conv, alpha, viewer));
45789566063dSJacob Faibussowitsch         PetscCall(PetscViewerPopFormat(viewer));
45799566063dSJacob Faibussowitsch         PetscCall(PetscViewerDestroy(&viewer));
45809566063dSJacob Faibussowitsch         PetscCall(PetscConvEstDestroy(&conv));
45819566063dSJacob Faibussowitsch         PetscCall(PetscFree(alpha));
458206fc46c8SMatthew G. Knepley         incall = PETSC_FALSE;
458306fc46c8SMatthew G. Knepley       }
458434b4d3a8SMatthew G. Knepley       /* Adaptively refine the initial grid */
4585b2588ea6SMatthew G. Knepley       num = 1;
45869566063dSJacob Faibussowitsch       PetscCall(PetscOptionsGetInt(NULL, ((PetscObject)snes)->prefix, "-snes_adapt_initial", &num, &flg));
458734b4d3a8SMatthew G. Knepley       if (flg) {
458834b4d3a8SMatthew G. Knepley         DMAdaptor adaptor;
458934b4d3a8SMatthew G. Knepley 
459034b4d3a8SMatthew G. Knepley         incall = PETSC_TRUE;
45919566063dSJacob Faibussowitsch         PetscCall(DMAdaptorCreate(PetscObjectComm((PetscObject)snes), &adaptor));
45929566063dSJacob Faibussowitsch         PetscCall(DMAdaptorSetSolver(adaptor, snes));
45939566063dSJacob Faibussowitsch         PetscCall(DMAdaptorSetSequenceLength(adaptor, num));
45949566063dSJacob Faibussowitsch         PetscCall(DMAdaptorSetFromOptions(adaptor));
45959566063dSJacob Faibussowitsch         PetscCall(DMAdaptorSetUp(adaptor));
45969566063dSJacob Faibussowitsch         PetscCall(DMAdaptorAdapt(adaptor, x, DM_ADAPTATION_INITIAL, &dm, &x));
45979566063dSJacob Faibussowitsch         PetscCall(DMAdaptorDestroy(&adaptor));
459834b4d3a8SMatthew G. Knepley         incall = PETSC_FALSE;
459934b4d3a8SMatthew G. Knepley       }
46007c88af5aSMatthew G. Knepley       /* Use grid sequencing to adapt */
46017c88af5aSMatthew G. Knepley       num = 0;
46029566063dSJacob Faibussowitsch       PetscCall(PetscOptionsGetInt(NULL, ((PetscObject)snes)->prefix, "-snes_adapt_sequence", &num, NULL));
46037c88af5aSMatthew G. Knepley       if (num) {
46047c88af5aSMatthew G. Knepley         DMAdaptor adaptor;
46057c88af5aSMatthew G. Knepley 
46067c88af5aSMatthew G. Knepley         incall = PETSC_TRUE;
46079566063dSJacob Faibussowitsch         PetscCall(DMAdaptorCreate(PetscObjectComm((PetscObject)snes), &adaptor));
46089566063dSJacob Faibussowitsch         PetscCall(DMAdaptorSetSolver(adaptor, snes));
46099566063dSJacob Faibussowitsch         PetscCall(DMAdaptorSetSequenceLength(adaptor, num));
46109566063dSJacob Faibussowitsch         PetscCall(DMAdaptorSetFromOptions(adaptor));
46119566063dSJacob Faibussowitsch         PetscCall(DMAdaptorSetUp(adaptor));
46129566063dSJacob Faibussowitsch         PetscCall(DMAdaptorAdapt(adaptor, x, DM_ADAPTATION_SEQUENTIAL, &dm, &x));
46139566063dSJacob Faibussowitsch         PetscCall(DMAdaptorDestroy(&adaptor));
46147c88af5aSMatthew G. Knepley         incall = PETSC_FALSE;
46157c88af5aSMatthew G. Knepley       }
461606fc46c8SMatthew G. Knepley     }
461706fc46c8SMatthew G. Knepley   }
4618ad540459SPierre Jolivet   if (!x) x = snes->vec_sol;
4619caa4e7f2SJed Brown   if (!x) {
46209566063dSJacob Faibussowitsch     PetscCall(SNESGetDM(snes, &dm));
46219566063dSJacob Faibussowitsch     PetscCall(DMCreateGlobalVector(dm, &xcreated));
4622a69afd8bSBarry Smith     x = xcreated;
4623a69afd8bSBarry Smith   }
46249566063dSJacob Faibussowitsch   PetscCall(SNESViewFromOptions(snes, NULL, "-snes_view_pre"));
4625f05ece33SBarry Smith 
46269566063dSJacob Faibussowitsch   for (grid = 0; grid < snes->gridsequence; grid++) PetscCall(PetscViewerASCIIPushTab(PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)snes))));
4627efd51863SBarry Smith   for (grid = 0; grid < snes->gridsequence + 1; grid++) {
462885385478SLisandro Dalcin     /* set solution vector */
46299566063dSJacob Faibussowitsch     if (!grid) PetscCall(PetscObjectReference((PetscObject)x));
46309566063dSJacob Faibussowitsch     PetscCall(VecDestroy(&snes->vec_sol));
463185385478SLisandro Dalcin     snes->vec_sol = x;
46329566063dSJacob Faibussowitsch     PetscCall(SNESGetDM(snes, &dm));
4633caa4e7f2SJed Brown 
4634caa4e7f2SJed Brown     /* set affine vector if provided */
46359566063dSJacob Faibussowitsch     if (b) PetscCall(PetscObjectReference((PetscObject)b));
46369566063dSJacob Faibussowitsch     PetscCall(VecDestroy(&snes->vec_rhs));
463785385478SLisandro Dalcin     snes->vec_rhs = b;
463885385478SLisandro Dalcin 
46395f80ce2aSJacob Faibussowitsch     if (snes->vec_rhs) PetscCheck(snes->vec_func != snes->vec_rhs, PETSC_COMM_SELF, PETSC_ERR_ARG_IDN, "Right hand side vector cannot be function vector");
46405f80ce2aSJacob Faibussowitsch     PetscCheck(snes->vec_func != snes->vec_sol, PETSC_COMM_SELF, PETSC_ERR_ARG_IDN, "Solution vector cannot be function vector");
46415f80ce2aSJacob Faibussowitsch     PetscCheck(snes->vec_rhs != snes->vec_sol, PETSC_COMM_SELF, PETSC_ERR_ARG_IDN, "Solution vector cannot be right hand side vector");
4642aa624791SPierre Jolivet     if (!snes->vec_sol_update /* && snes->vec_sol */) PetscCall(VecDuplicate(snes->vec_sol, &snes->vec_sol_update));
46439566063dSJacob Faibussowitsch     PetscCall(DMShellSetGlobalVector(dm, snes->vec_sol));
46449566063dSJacob Faibussowitsch     PetscCall(SNESSetUp(snes));
46453f149594SLisandro Dalcin 
46467eee914bSBarry Smith     if (!grid) {
464725e27a38SBarry Smith       if (snes->ops->computeinitialguess) PetscCallBack("SNES callback initial guess", (*snes->ops->computeinitialguess)(snes, snes->vec_sol, snes->initialguessP));
4648dd568438SSatish Balay     }
4649d25893d9SBarry Smith 
4650abc0a331SBarry Smith     if (snes->conv_hist_reset) snes->conv_hist_len = 0;
46519371c9d4SSatish Balay     if (snes->counters_reset) {
46529371c9d4SSatish Balay       snes->nfuncs      = 0;
46539371c9d4SSatish Balay       snes->linear_its  = 0;
46549371c9d4SSatish Balay       snes->numFailures = 0;
46559371c9d4SSatish Balay     }
4656d5e45103SBarry Smith 
46572d157150SStefano Zampini     snes->reason = SNES_CONVERGED_ITERATING;
46589566063dSJacob Faibussowitsch     PetscCall(PetscLogEventBegin(SNES_Solve, snes, 0, 0, 0));
4659dbbe0bcdSBarry Smith     PetscUseTypeMethod(snes, solve);
46609566063dSJacob Faibussowitsch     PetscCall(PetscLogEventEnd(SNES_Solve, snes, 0, 0, 0));
46612d157150SStefano Zampini     PetscCheck(snes->reason, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Internal error, solver %s returned without setting converged reason", ((PetscObject)snes)->type_name);
4662422a814eSBarry Smith     snes->domainerror = PETSC_FALSE; /* clear the flag if it has been set */
46633f149594SLisandro Dalcin 
466437ec4e1aSPeter Brune     if (snes->lagjac_persist) snes->jac_iter += snes->iter;
466537ec4e1aSPeter Brune     if (snes->lagpre_persist) snes->pre_iter += snes->iter;
466637ec4e1aSPeter Brune 
46679566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_test_local_min", NULL, NULL, &flg));
46689566063dSJacob Faibussowitsch     if (flg && !PetscPreLoadingOn) PetscCall(SNESTestLocalMin(snes));
4669c4421ceaSFande Kong     /* Call converged reason views. This may involve user-provided viewers as well */
46709566063dSJacob Faibussowitsch     PetscCall(SNESConvergedReasonViewFromOptions(snes));
46715968eb51SBarry Smith 
46725f80ce2aSJacob Faibussowitsch     if (snes->errorifnotconverged) PetscCheck(snes->reason >= 0, PetscObjectComm((PetscObject)snes), PETSC_ERR_NOT_CONVERGED, "SNESSolve has not converged");
46739c8e83a9SBarry Smith     if (snes->reason < 0) break;
4674efd51863SBarry Smith     if (grid < snes->gridsequence) {
4675efd51863SBarry Smith       DM  fine;
4676efd51863SBarry Smith       Vec xnew;
4677efd51863SBarry Smith       Mat interp;
4678efd51863SBarry Smith 
46799566063dSJacob Faibussowitsch       PetscCall(DMRefine(snes->dm, PetscObjectComm((PetscObject)snes), &fine));
46805f80ce2aSJacob Faibussowitsch       PetscCheck(fine, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_INCOMP, "DMRefine() did not perform any refinement, cannot continue grid sequencing");
46819566063dSJacob Faibussowitsch       PetscCall(DMCreateInterpolation(snes->dm, fine, &interp, NULL));
46829566063dSJacob Faibussowitsch       PetscCall(DMCreateGlobalVector(fine, &xnew));
46839566063dSJacob Faibussowitsch       PetscCall(MatInterpolate(interp, x, xnew));
46849566063dSJacob Faibussowitsch       PetscCall(DMInterpolate(snes->dm, interp, fine));
46859566063dSJacob Faibussowitsch       PetscCall(MatDestroy(&interp));
4686efd51863SBarry Smith       x = xnew;
4687efd51863SBarry Smith 
46889566063dSJacob Faibussowitsch       PetscCall(SNESReset(snes));
46899566063dSJacob Faibussowitsch       PetscCall(SNESSetDM(snes, fine));
46909566063dSJacob Faibussowitsch       PetscCall(SNESResetFromOptions(snes));
46919566063dSJacob Faibussowitsch       PetscCall(DMDestroy(&fine));
46929566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPopTab(PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)snes))));
4693efd51863SBarry Smith     }
4694efd51863SBarry Smith   }
46959566063dSJacob Faibussowitsch   PetscCall(SNESViewFromOptions(snes, NULL, "-snes_view"));
46969566063dSJacob Faibussowitsch   PetscCall(VecViewFromOptions(snes->vec_sol, (PetscObject)snes, "-snes_view_solution"));
46979566063dSJacob Faibussowitsch   PetscCall(DMMonitor(snes->dm));
46989566063dSJacob Faibussowitsch   PetscCall(SNESMonitorPauseFinal_Internal(snes));
46993f7e2da0SPeter Brune 
47009566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&xcreated));
47019566063dSJacob Faibussowitsch   PetscCall(PetscObjectSAWsBlock((PetscObject)snes));
47023ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
47039b94acceSBarry Smith }
47049b94acceSBarry Smith 
47059b94acceSBarry Smith /* --------- Internal routines for SNES Package --------- */
47069b94acceSBarry Smith 
470782bf6240SBarry Smith /*@C
47084b0e389bSBarry Smith   SNESSetType - Sets the method for the nonlinear solver.
47099b94acceSBarry Smith 
4710c3339decSBarry Smith   Collective
4711fee21e36SBarry Smith 
4712c7afd0dbSLois Curfman McInnes   Input Parameters:
4713f6dfbefdSBarry Smith + snes - the `SNES` context
4714454a90a3SBarry Smith - type - a known method
4715c7afd0dbSLois Curfman McInnes 
4716c7afd0dbSLois Curfman McInnes   Options Database Key:
4717454a90a3SBarry Smith . -snes_type <type> - Sets the method; use -help for a list
471804d7464bSBarry Smith    of available methods (for instance, newtonls or newtontr)
4719ae12b187SLois Curfman McInnes 
4720dc4c0fb0SBarry Smith   Level: intermediate
4721dc4c0fb0SBarry Smith 
47229b94acceSBarry Smith   Notes:
4723e090d566SSatish Balay   See "petsc/include/petscsnes.h" for available methods (for instance)
4724f6dfbefdSBarry Smith +    `SNESNEWTONLS` - Newton's method with line search
4725c7afd0dbSLois Curfman McInnes   (systems of nonlinear equations)
47264a221d59SStefano Zampini -    `SNESNEWTONTR` - Newton's method with trust region
4727c7afd0dbSLois Curfman McInnes   (systems of nonlinear equations)
47289b94acceSBarry Smith 
4729f6dfbefdSBarry Smith   Normally, it is best to use the `SNESSetFromOptions()` command and then
4730f6dfbefdSBarry Smith   set the `SNES` solver type from the options database rather than by using
4731ae12b187SLois Curfman McInnes   this routine.  Using the options database provides the user with
4732ae12b187SLois Curfman McInnes   maximum flexibility in evaluating the many nonlinear solvers.
4733f6dfbefdSBarry Smith   The `SNESSetType()` routine is provided for those situations where it
4734ae12b187SLois Curfman McInnes   is necessary to set the nonlinear solver independently of the command
4735ae12b187SLois Curfman McInnes   line or options database.  This might be the case, for example, when
4736ae12b187SLois Curfman McInnes   the choice of solver changes during the execution of the program,
4737ae12b187SLois Curfman McInnes   and the user's application is taking responsibility for choosing the
4738b0a32e0cSBarry Smith   appropriate method.
473936851e7fSLois Curfman McInnes 
4740420bcc1bSBarry Smith   Developer Note:
4741f6dfbefdSBarry Smith   `SNESRegister()` adds a constructor for a new `SNESType` to `SNESList`, `SNESSetType()` locates
4742f6dfbefdSBarry Smith   the constructor in that list and calls it to create the specific object.
47438f6c3df8SBarry Smith 
47441cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESType`, `SNESCreate()`, `SNESDestroy()`, `SNESGetType()`, `SNESSetFromOptions()`
47459b94acceSBarry Smith @*/
4746d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetType(SNES snes, SNESType type)
4747d71ae5a4SJacob Faibussowitsch {
4748ace3abfcSBarry Smith   PetscBool match;
47495f80ce2aSJacob Faibussowitsch   PetscErrorCode (*r)(SNES);
47503a40ed3dSBarry Smith 
47513a40ed3dSBarry Smith   PetscFunctionBegin;
47520700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
47534f572ea9SToby Isaac   PetscAssertPointer(type, 2);
475482bf6240SBarry Smith 
47559566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)snes, type, &match));
47563ba16761SJacob Faibussowitsch   if (match) PetscFunctionReturn(PETSC_SUCCESS);
475792ff6ae8SBarry Smith 
47589566063dSJacob Faibussowitsch   PetscCall(PetscFunctionListFind(SNESList, type, &r));
47596adde796SStefano Zampini   PetscCheck(r, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_UNKNOWN_TYPE, "Unable to find requested SNES type %s", type);
476075396ef9SLisandro Dalcin   /* Destroy the previous private SNES context */
4761dbbe0bcdSBarry Smith   PetscTryTypeMethod(snes, destroy);
476275396ef9SLisandro Dalcin   /* Reinitialize function pointers in SNESOps structure */
47639e5d0892SLisandro Dalcin   snes->ops->setup          = NULL;
47649e5d0892SLisandro Dalcin   snes->ops->solve          = NULL;
47659e5d0892SLisandro Dalcin   snes->ops->view           = NULL;
47669e5d0892SLisandro Dalcin   snes->ops->setfromoptions = NULL;
47679e5d0892SLisandro Dalcin   snes->ops->destroy        = NULL;
47687fe760d5SStefano Zampini 
47697fe760d5SStefano Zampini   /* It may happen the user has customized the line search before calling SNESSetType */
47709566063dSJacob Faibussowitsch   if (((PetscObject)snes)->type_name) PetscCall(SNESLineSearchDestroy(&snes->linesearch));
47717fe760d5SStefano Zampini 
477275396ef9SLisandro Dalcin   /* Call the SNESCreate_XXX routine for this particular Nonlinear solver */
477375396ef9SLisandro Dalcin   snes->setupcalled = PETSC_FALSE;
4774f5af7f23SKarl Rupp 
47759566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)snes, type));
47769566063dSJacob Faibussowitsch   PetscCall((*r)(snes));
47773ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
47789b94acceSBarry Smith }
47799b94acceSBarry Smith 
47809b94acceSBarry Smith /*@C
4781f6dfbefdSBarry Smith   SNESGetType - Gets the `SNES` method type and name (as a string).
47829b94acceSBarry Smith 
4783c7afd0dbSLois Curfman McInnes   Not Collective
4784c7afd0dbSLois Curfman McInnes 
47859b94acceSBarry Smith   Input Parameter:
47864b0e389bSBarry Smith . snes - nonlinear solver context
47879b94acceSBarry Smith 
47889b94acceSBarry Smith   Output Parameter:
4789f6dfbefdSBarry Smith . type - `SNES` method (a character string)
47909b94acceSBarry Smith 
479136851e7fSLois Curfman McInnes   Level: intermediate
479236851e7fSLois Curfman McInnes 
47931cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetType()`, `SNESType`, `SNESSetFromOptions()`, `SNES`
47949b94acceSBarry Smith @*/
4795d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetType(SNES snes, SNESType *type)
4796d71ae5a4SJacob Faibussowitsch {
47973a40ed3dSBarry Smith   PetscFunctionBegin;
47980700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
47994f572ea9SToby Isaac   PetscAssertPointer(type, 2);
48007adad957SLisandro Dalcin   *type = ((PetscObject)snes)->type_name;
48013ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
48029b94acceSBarry Smith }
48039b94acceSBarry Smith 
48043cd8a7caSMatthew G. Knepley /*@
4805f6dfbefdSBarry Smith   SNESSetSolution - Sets the solution vector for use by the `SNES` routines.
48063cd8a7caSMatthew G. Knepley 
4807c3339decSBarry Smith   Logically Collective
48083cd8a7caSMatthew G. Knepley 
48093cd8a7caSMatthew G. Knepley   Input Parameters:
4810f6dfbefdSBarry Smith + snes - the `SNES` context obtained from `SNESCreate()`
48113cd8a7caSMatthew G. Knepley - u    - the solution vector
48123cd8a7caSMatthew G. Knepley 
48133cd8a7caSMatthew G. Knepley   Level: beginner
48143cd8a7caSMatthew G. Knepley 
48151cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESGetSolution()`, `Vec`
48163cd8a7caSMatthew G. Knepley @*/
4817d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetSolution(SNES snes, Vec u)
4818d71ae5a4SJacob Faibussowitsch {
48193cd8a7caSMatthew G. Knepley   DM dm;
48203cd8a7caSMatthew G. Knepley 
48213cd8a7caSMatthew G. Knepley   PetscFunctionBegin;
48223cd8a7caSMatthew G. Knepley   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
48233cd8a7caSMatthew G. Knepley   PetscValidHeaderSpecific(u, VEC_CLASSID, 2);
48249566063dSJacob Faibussowitsch   PetscCall(PetscObjectReference((PetscObject)u));
48259566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&snes->vec_sol));
48263cd8a7caSMatthew G. Knepley 
48273cd8a7caSMatthew G. Knepley   snes->vec_sol = u;
48283cd8a7caSMatthew G. Knepley 
48299566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
48309566063dSJacob Faibussowitsch   PetscCall(DMShellSetGlobalVector(dm, u));
48313ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
48323cd8a7caSMatthew G. Knepley }
48333cd8a7caSMatthew G. Knepley 
483452baeb72SSatish Balay /*@
48359b94acceSBarry Smith   SNESGetSolution - Returns the vector where the approximate solution is
4836f6dfbefdSBarry Smith   stored. This is the fine grid solution when using `SNESSetGridSequence()`.
48379b94acceSBarry Smith 
4838420bcc1bSBarry Smith   Not Collective, but `x` is parallel if `snes` is parallel
4839c7afd0dbSLois Curfman McInnes 
48409b94acceSBarry Smith   Input Parameter:
4841f6dfbefdSBarry Smith . snes - the `SNES` context
48429b94acceSBarry Smith 
48439b94acceSBarry Smith   Output Parameter:
48449b94acceSBarry Smith . x - the solution
48459b94acceSBarry Smith 
484670e92668SMatthew Knepley   Level: intermediate
484736851e7fSLois Curfman McInnes 
48481cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetSolution()`, `SNESSolve()`, `SNES`, `SNESGetSolutionUpdate()`, `SNESGetFunction()`
48499b94acceSBarry Smith @*/
4850d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetSolution(SNES snes, Vec *x)
4851d71ae5a4SJacob Faibussowitsch {
48523a40ed3dSBarry Smith   PetscFunctionBegin;
48530700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
48544f572ea9SToby Isaac   PetscAssertPointer(x, 2);
485585385478SLisandro Dalcin   *x = snes->vec_sol;
48563ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
485770e92668SMatthew Knepley }
485870e92668SMatthew Knepley 
485952baeb72SSatish Balay /*@
48609b94acceSBarry Smith   SNESGetSolutionUpdate - Returns the vector where the solution update is
48619b94acceSBarry Smith   stored.
48629b94acceSBarry Smith 
4863420bcc1bSBarry Smith   Not Collective, but `x` is parallel if `snes` is parallel
4864c7afd0dbSLois Curfman McInnes 
48659b94acceSBarry Smith   Input Parameter:
4866f6dfbefdSBarry Smith . snes - the `SNES` context
48679b94acceSBarry Smith 
48689b94acceSBarry Smith   Output Parameter:
48699b94acceSBarry Smith . x - the solution update
48709b94acceSBarry Smith 
487136851e7fSLois Curfman McInnes   Level: advanced
487236851e7fSLois Curfman McInnes 
48731cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetSolution()`, `SNESGetFunction()`
48749b94acceSBarry Smith @*/
4875d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetSolutionUpdate(SNES snes, Vec *x)
4876d71ae5a4SJacob Faibussowitsch {
48773a40ed3dSBarry Smith   PetscFunctionBegin;
48780700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
48794f572ea9SToby Isaac   PetscAssertPointer(x, 2);
488085385478SLisandro Dalcin   *x = snes->vec_sol_update;
48813ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
48829b94acceSBarry Smith }
48839b94acceSBarry Smith 
48849b94acceSBarry Smith /*@C
4885f6dfbefdSBarry Smith   SNESGetFunction - Returns the function that defines the nonlinear system set with `SNESSetFunction()`
48869b94acceSBarry Smith 
4887420bcc1bSBarry Smith   Not Collective, but `r` is parallel if `snes` is parallel. Collective if `r` is requested, but has not been created yet.
4888c7afd0dbSLois Curfman McInnes 
48899b94acceSBarry Smith   Input Parameter:
4890f6dfbefdSBarry Smith . snes - the `SNES` context
48919b94acceSBarry Smith 
4892d8d19677SJose E. Roman   Output Parameters:
4893dc4c0fb0SBarry Smith + r   - the vector that is used to store residuals (or `NULL` if you don't want it)
489420f4b53cSBarry Smith . f   - the function (or `NULL` if you don't want it);  for calling sequence see `SNESFunction`
4895dc4c0fb0SBarry Smith - ctx - the function context (or `NULL` if you don't want it)
48969b94acceSBarry Smith 
489736851e7fSLois Curfman McInnes   Level: advanced
489836851e7fSLois Curfman McInnes 
4899f6dfbefdSBarry Smith   Note:
4900dc4c0fb0SBarry Smith   The vector `r` DOES NOT, in general, contain the current value of the `SNES` nonlinear function
490104edfde5SBarry Smith 
4902e4094ef1SJacob Faibussowitsch .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetFunction()`, `SNESGetSolution()`, `SNESFunction`
49039b94acceSBarry Smith @*/
4904d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetFunction(SNES snes, Vec *r, PetscErrorCode (**f)(SNES, Vec, Vec, void *), void **ctx)
4905d71ae5a4SJacob Faibussowitsch {
49066cab3a1bSJed Brown   DM dm;
4907a63bb30eSJed Brown 
49083a40ed3dSBarry Smith   PetscFunctionBegin;
49090700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4910a63bb30eSJed Brown   if (r) {
4911a63bb30eSJed Brown     if (!snes->vec_func) {
4912a63bb30eSJed Brown       if (snes->vec_rhs) {
49139566063dSJacob Faibussowitsch         PetscCall(VecDuplicate(snes->vec_rhs, &snes->vec_func));
4914a63bb30eSJed Brown       } else if (snes->vec_sol) {
49159566063dSJacob Faibussowitsch         PetscCall(VecDuplicate(snes->vec_sol, &snes->vec_func));
4916a63bb30eSJed Brown       } else if (snes->dm) {
49179566063dSJacob Faibussowitsch         PetscCall(DMCreateGlobalVector(snes->dm, &snes->vec_func));
4918a63bb30eSJed Brown       }
4919a63bb30eSJed Brown     }
4920a63bb30eSJed Brown     *r = snes->vec_func;
4921a63bb30eSJed Brown   }
49229566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
49239566063dSJacob Faibussowitsch   PetscCall(DMSNESGetFunction(dm, f, ctx));
49243ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
49259b94acceSBarry Smith }
49269b94acceSBarry Smith 
4927c79ef259SPeter Brune /*@C
492837fdd005SBarry Smith   SNESGetNGS - Returns the function and context set with `SNESSetNGS()`
4929c79ef259SPeter Brune 
4930c79ef259SPeter Brune   Input Parameter:
4931f6dfbefdSBarry Smith . snes - the `SNES` context
4932c79ef259SPeter Brune 
4933d8d19677SJose E. Roman   Output Parameters:
493437fdd005SBarry Smith + f   - the function (or `NULL`) see `SNESSetNGS()` for details
4935dc4c0fb0SBarry Smith - ctx - the function context (or `NULL`)
4936c79ef259SPeter Brune 
4937c79ef259SPeter Brune   Level: advanced
4938c79ef259SPeter Brune 
49391cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetNGS()`, `SNESGetFunction()`
4940c79ef259SPeter Brune @*/
4941d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetNGS(SNES snes, PetscErrorCode (**f)(SNES, Vec, Vec, void *), void **ctx)
4942d71ae5a4SJacob Faibussowitsch {
49436cab3a1bSJed Brown   DM dm;
49446cab3a1bSJed Brown 
4945646217ecSPeter Brune   PetscFunctionBegin;
4946646217ecSPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
49479566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
49489566063dSJacob Faibussowitsch   PetscCall(DMSNESGetNGS(dm, f, ctx));
49493ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4950646217ecSPeter Brune }
4951646217ecSPeter Brune 
49523c7409f5SSatish Balay /*@C
49533c7409f5SSatish Balay   SNESSetOptionsPrefix - Sets the prefix used for searching for all
4954f6dfbefdSBarry Smith   `SNES` options in the database.
49553c7409f5SSatish Balay 
4956c3339decSBarry Smith   Logically Collective
4957fee21e36SBarry Smith 
4958d8d19677SJose E. Roman   Input Parameters:
4959f6dfbefdSBarry Smith + snes   - the `SNES` context
4960c7afd0dbSLois Curfman McInnes - prefix - the prefix to prepend to all option names
4961c7afd0dbSLois Curfman McInnes 
4962dc4c0fb0SBarry Smith   Level: advanced
4963dc4c0fb0SBarry Smith 
4964f6dfbefdSBarry Smith   Note:
4965a83b1b31SSatish Balay   A hyphen (-) must NOT be given at the beginning of the prefix name.
4966c7afd0dbSLois Curfman McInnes   The first character of all runtime options is AUTOMATICALLY the hyphen.
4967d850072dSLois Curfman McInnes 
49681cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetFromOptions()`, `SNESAppendOptionsPrefix()`
49693c7409f5SSatish Balay @*/
4970d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetOptionsPrefix(SNES snes, const char prefix[])
4971d71ae5a4SJacob Faibussowitsch {
49723a40ed3dSBarry Smith   PetscFunctionBegin;
49730700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
49749566063dSJacob Faibussowitsch   PetscCall(PetscObjectSetOptionsPrefix((PetscObject)snes, prefix));
49759566063dSJacob Faibussowitsch   if (!snes->ksp) PetscCall(SNESGetKSP(snes, &snes->ksp));
497635f5d045SPeter Brune   if (snes->linesearch) {
49779566063dSJacob Faibussowitsch     PetscCall(SNESGetLineSearch(snes, &snes->linesearch));
49789566063dSJacob Faibussowitsch     PetscCall(PetscObjectSetOptionsPrefix((PetscObject)snes->linesearch, prefix));
497935f5d045SPeter Brune   }
49809566063dSJacob Faibussowitsch   PetscCall(KSPSetOptionsPrefix(snes->ksp, prefix));
49813ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
49823c7409f5SSatish Balay }
49833c7409f5SSatish Balay 
49843c7409f5SSatish Balay /*@C
4985f525115eSLois Curfman McInnes   SNESAppendOptionsPrefix - Appends to the prefix used for searching for all
4986f6dfbefdSBarry Smith   `SNES` options in the database.
49873c7409f5SSatish Balay 
4988c3339decSBarry Smith   Logically Collective
4989fee21e36SBarry Smith 
4990c7afd0dbSLois Curfman McInnes   Input Parameters:
4991f6dfbefdSBarry Smith + snes   - the `SNES` context
4992c7afd0dbSLois Curfman McInnes - prefix - the prefix to prepend to all option names
4993c7afd0dbSLois Curfman McInnes 
4994dc4c0fb0SBarry Smith   Level: advanced
4995dc4c0fb0SBarry Smith 
4996f6dfbefdSBarry Smith   Note:
4997a83b1b31SSatish Balay   A hyphen (-) must NOT be given at the beginning of the prefix name.
4998c7afd0dbSLois Curfman McInnes   The first character of all runtime options is AUTOMATICALLY the hyphen.
4999d850072dSLois Curfman McInnes 
50001cc06b55SBarry Smith .seealso: [](ch_snes), `SNESGetOptionsPrefix()`, `SNESSetOptionsPrefix()`
50013c7409f5SSatish Balay @*/
5002d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESAppendOptionsPrefix(SNES snes, const char prefix[])
5003d71ae5a4SJacob Faibussowitsch {
50043a40ed3dSBarry Smith   PetscFunctionBegin;
50050700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
50069566063dSJacob Faibussowitsch   PetscCall(PetscObjectAppendOptionsPrefix((PetscObject)snes, prefix));
50079566063dSJacob Faibussowitsch   if (!snes->ksp) PetscCall(SNESGetKSP(snes, &snes->ksp));
500835f5d045SPeter Brune   if (snes->linesearch) {
50099566063dSJacob Faibussowitsch     PetscCall(SNESGetLineSearch(snes, &snes->linesearch));
50109566063dSJacob Faibussowitsch     PetscCall(PetscObjectAppendOptionsPrefix((PetscObject)snes->linesearch, prefix));
501135f5d045SPeter Brune   }
50129566063dSJacob Faibussowitsch   PetscCall(KSPAppendOptionsPrefix(snes->ksp, prefix));
50133ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
50143c7409f5SSatish Balay }
50153c7409f5SSatish Balay 
50169ab63eb5SSatish Balay /*@C
5017f6dfbefdSBarry Smith   SNESGetOptionsPrefix - Gets the prefix used for searching for all
5018f6dfbefdSBarry Smith   `SNES` options in the database.
50193c7409f5SSatish Balay 
5020c7afd0dbSLois Curfman McInnes   Not Collective
5021c7afd0dbSLois Curfman McInnes 
50223c7409f5SSatish Balay   Input Parameter:
5023f6dfbefdSBarry Smith . snes - the `SNES` context
50243c7409f5SSatish Balay 
50253c7409f5SSatish Balay   Output Parameter:
50263c7409f5SSatish Balay . prefix - pointer to the prefix string used
50273c7409f5SSatish Balay 
502836851e7fSLois Curfman McInnes   Level: advanced
502936851e7fSLois Curfman McInnes 
5030420bcc1bSBarry Smith   Fortran Note:
5031dc4c0fb0SBarry Smith   The user should pass in a string 'prefix' of
5032dc4c0fb0SBarry Smith   sufficient length to hold the prefix.
5033dc4c0fb0SBarry Smith 
50341cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetOptionsPrefix()`, `SNESAppendOptionsPrefix()`
50353c7409f5SSatish Balay @*/
5036d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetOptionsPrefix(SNES snes, const char *prefix[])
5037d71ae5a4SJacob Faibussowitsch {
50383a40ed3dSBarry Smith   PetscFunctionBegin;
50390700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
50409566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetOptionsPrefix((PetscObject)snes, prefix));
50413ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
50423c7409f5SSatish Balay }
50433c7409f5SSatish Balay 
50443cea93caSBarry Smith /*@C
50451c84c290SBarry Smith   SNESRegister - Adds a method to the nonlinear solver package.
50461c84c290SBarry Smith 
504720f4b53cSBarry Smith   Not Collective
50481c84c290SBarry Smith 
50491c84c290SBarry Smith   Input Parameters:
505020f4b53cSBarry Smith + sname    - name of a new user-defined solver
505120f4b53cSBarry Smith - function - routine to create method context
50521c84c290SBarry Smith 
5053dc4c0fb0SBarry Smith   Level: advanced
5054dc4c0fb0SBarry Smith 
5055f6dfbefdSBarry Smith   Note:
5056f6dfbefdSBarry Smith   `SNESRegister()` may be called multiple times to add several user-defined solvers.
50571c84c290SBarry Smith 
5058e4094ef1SJacob Faibussowitsch   Example Usage:
50591c84c290SBarry Smith .vb
5060bdf89e91SBarry Smith    SNESRegister("my_solver", MySolverCreate);
50611c84c290SBarry Smith .ve
50621c84c290SBarry Smith 
50631c84c290SBarry Smith   Then, your solver can be chosen with the procedural interface via
50641c84c290SBarry Smith $     SNESSetType(snes, "my_solver")
50651c84c290SBarry Smith   or at runtime via the option
50661c84c290SBarry Smith $     -snes_type my_solver
50671c84c290SBarry Smith 
50681cc06b55SBarry Smith .seealso: [](ch_snes), `SNESRegisterAll()`, `SNESRegisterDestroy()`
50693cea93caSBarry Smith @*/
5070d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESRegister(const char sname[], PetscErrorCode (*function)(SNES))
5071d71ae5a4SJacob Faibussowitsch {
5072b2002411SLois Curfman McInnes   PetscFunctionBegin;
50739566063dSJacob Faibussowitsch   PetscCall(SNESInitializePackage());
50749566063dSJacob Faibussowitsch   PetscCall(PetscFunctionListAdd(&SNESList, sname, function));
50753ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
5076b2002411SLois Curfman McInnes }
5077da9b6338SBarry Smith 
5078d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESTestLocalMin(SNES snes)
5079d71ae5a4SJacob Faibussowitsch {
508077431f27SBarry Smith   PetscInt    N, i, j;
5081da9b6338SBarry Smith   Vec         u, uh, fh;
5082da9b6338SBarry Smith   PetscScalar value;
5083da9b6338SBarry Smith   PetscReal   norm;
5084da9b6338SBarry Smith 
5085da9b6338SBarry Smith   PetscFunctionBegin;
50869566063dSJacob Faibussowitsch   PetscCall(SNESGetSolution(snes, &u));
50879566063dSJacob Faibussowitsch   PetscCall(VecDuplicate(u, &uh));
50889566063dSJacob Faibussowitsch   PetscCall(VecDuplicate(u, &fh));
5089da9b6338SBarry Smith 
5090da9b6338SBarry Smith   /* currently only works for sequential */
50919566063dSJacob Faibussowitsch   PetscCall(PetscPrintf(PetscObjectComm((PetscObject)snes), "Testing FormFunction() for local min\n"));
50929566063dSJacob Faibussowitsch   PetscCall(VecGetSize(u, &N));
5093da9b6338SBarry Smith   for (i = 0; i < N; i++) {
50949566063dSJacob Faibussowitsch     PetscCall(VecCopy(u, uh));
509563a3b9bcSJacob Faibussowitsch     PetscCall(PetscPrintf(PetscObjectComm((PetscObject)snes), "i = %" PetscInt_FMT "\n", i));
5096da9b6338SBarry Smith     for (j = -10; j < 11; j++) {
50978b49ba18SBarry Smith       value = PetscSign(j) * PetscExpReal(PetscAbs(j) - 10.0);
50989566063dSJacob Faibussowitsch       PetscCall(VecSetValue(uh, i, value, ADD_VALUES));
50999566063dSJacob Faibussowitsch       PetscCall(SNESComputeFunction(snes, uh, fh));
51009566063dSJacob Faibussowitsch       PetscCall(VecNorm(fh, NORM_2, &norm));
510163a3b9bcSJacob Faibussowitsch       PetscCall(PetscPrintf(PetscObjectComm((PetscObject)snes), "       j norm %" PetscInt_FMT " %18.16e\n", j, (double)norm));
5102da9b6338SBarry Smith       value = -value;
51039566063dSJacob Faibussowitsch       PetscCall(VecSetValue(uh, i, value, ADD_VALUES));
5104da9b6338SBarry Smith     }
5105da9b6338SBarry Smith   }
51069566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&uh));
51079566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&fh));
51083ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
5109da9b6338SBarry Smith }
511071f87433Sdalcinl 
511171f87433Sdalcinl /*@
5112f6dfbefdSBarry Smith   SNESKSPSetUseEW - Sets `SNES` to the use Eisenstat-Walker method for
511371f87433Sdalcinl   computing relative tolerance for linear solvers within an inexact
511471f87433Sdalcinl   Newton method.
511571f87433Sdalcinl 
5116c3339decSBarry Smith   Logically Collective
511771f87433Sdalcinl 
511871f87433Sdalcinl   Input Parameters:
5119f6dfbefdSBarry Smith + snes - `SNES` context
5120f6dfbefdSBarry Smith - flag - `PETSC_TRUE` or `PETSC_FALSE`
512171f87433Sdalcinl 
5122f6dfbefdSBarry Smith   Options Database Keys:
512364ba62caSBarry Smith + -snes_ksp_ew                       - use Eisenstat-Walker method for determining linear system convergence
512464ba62caSBarry Smith . -snes_ksp_ew_version ver           - version of  Eisenstat-Walker method
512564ba62caSBarry Smith . -snes_ksp_ew_rtol0 <rtol0>         - Sets rtol0
512664ba62caSBarry Smith . -snes_ksp_ew_rtolmax <rtolmax>     - Sets rtolmax
512764ba62caSBarry Smith . -snes_ksp_ew_gamma <gamma>         - Sets gamma
512864ba62caSBarry Smith . -snes_ksp_ew_alpha <alpha>         - Sets alpha
512964ba62caSBarry Smith . -snes_ksp_ew_alpha2 <alpha2>       - Sets alpha2
513064ba62caSBarry Smith - -snes_ksp_ew_threshold <threshold> - Sets threshold
513164ba62caSBarry Smith 
5132dc4c0fb0SBarry Smith   Level: advanced
5133dc4c0fb0SBarry Smith 
5134f6dfbefdSBarry Smith   Note:
5135f6dfbefdSBarry Smith   The default is to use a constant relative tolerance for
513671f87433Sdalcinl   the inner linear solvers.  Alternatively, one can use the
5137*1d27aa22SBarry Smith   Eisenstat-Walker method {cite}`ew96`, where the relative convergence tolerance
513871f87433Sdalcinl   is reset at each Newton iteration according progress of the nonlinear
513971f87433Sdalcinl   solver.
514071f87433Sdalcinl 
51411cc06b55SBarry Smith .seealso: [](ch_snes), `KSP`, `SNES`, `SNESKSPGetUseEW()`, `SNESKSPGetParametersEW()`, `SNESKSPSetParametersEW()`
514271f87433Sdalcinl @*/
5143d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESKSPSetUseEW(SNES snes, PetscBool flag)
5144d71ae5a4SJacob Faibussowitsch {
514571f87433Sdalcinl   PetscFunctionBegin;
51460700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5147acfcf0e5SJed Brown   PetscValidLogicalCollectiveBool(snes, flag, 2);
514871f87433Sdalcinl   snes->ksp_ewconv = flag;
51493ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
515071f87433Sdalcinl }
515171f87433Sdalcinl 
515271f87433Sdalcinl /*@
5153f6dfbefdSBarry Smith   SNESKSPGetUseEW - Gets if `SNES` is using Eisenstat-Walker method
515471f87433Sdalcinl   for computing relative tolerance for linear solvers within an
515571f87433Sdalcinl   inexact Newton method.
515671f87433Sdalcinl 
515771f87433Sdalcinl   Not Collective
515871f87433Sdalcinl 
515971f87433Sdalcinl   Input Parameter:
5160f6dfbefdSBarry Smith . snes - `SNES` context
516171f87433Sdalcinl 
516271f87433Sdalcinl   Output Parameter:
5163f6dfbefdSBarry Smith . flag - `PETSC_TRUE` or `PETSC_FALSE`
516471f87433Sdalcinl 
516571f87433Sdalcinl   Level: advanced
516671f87433Sdalcinl 
51671cc06b55SBarry Smith .seealso: [](ch_snes), `SNESKSPSetUseEW()`, `SNESKSPGetParametersEW()`, `SNESKSPSetParametersEW()`
516871f87433Sdalcinl @*/
5169d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESKSPGetUseEW(SNES snes, PetscBool *flag)
5170d71ae5a4SJacob Faibussowitsch {
517171f87433Sdalcinl   PetscFunctionBegin;
51720700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
51734f572ea9SToby Isaac   PetscAssertPointer(flag, 2);
517471f87433Sdalcinl   *flag = snes->ksp_ewconv;
51753ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
517671f87433Sdalcinl }
517771f87433Sdalcinl 
517871f87433Sdalcinl /*@
5179fa9f3622SBarry Smith   SNESKSPSetParametersEW - Sets parameters for Eisenstat-Walker
518071f87433Sdalcinl   convergence criteria for the linear solvers within an inexact
518171f87433Sdalcinl   Newton method.
518271f87433Sdalcinl 
5183c3339decSBarry Smith   Logically Collective
518471f87433Sdalcinl 
518571f87433Sdalcinl   Input Parameters:
5186f6dfbefdSBarry Smith + snes      - `SNES` context
51870f0abf79SStefano Zampini . version   - version 1, 2 (default is 2), 3 or 4
518871f87433Sdalcinl . rtol_0    - initial relative tolerance (0 <= rtol_0 < 1)
518971f87433Sdalcinl . rtol_max  - maximum relative tolerance (0 <= rtol_max < 1)
519071f87433Sdalcinl . gamma     - multiplicative factor for version 2 rtol computation
519171f87433Sdalcinl              (0 <= gamma2 <= 1)
519271f87433Sdalcinl . alpha     - power for version 2 rtol computation (1 < alpha <= 2)
519371f87433Sdalcinl . alpha2    - power for safeguard
519471f87433Sdalcinl - threshold - threshold for imposing safeguard (0 < threshold < 1)
519571f87433Sdalcinl 
5196dc4c0fb0SBarry Smith   Level: advanced
5197dc4c0fb0SBarry Smith 
5198f6dfbefdSBarry Smith   Notes:
519971f87433Sdalcinl   Version 3 was contributed by Luis Chacon, June 2006.
520071f87433Sdalcinl 
5201f6dfbefdSBarry Smith   Use `PETSC_DEFAULT` to retain the default for any of the parameters.
520271f87433Sdalcinl 
52031cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESKSPSetUseEW()`, `SNESKSPGetUseEW()`, `SNESKSPGetParametersEW()`
520471f87433Sdalcinl @*/
5205d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESKSPSetParametersEW(SNES snes, PetscInt version, PetscReal rtol_0, PetscReal rtol_max, PetscReal gamma, PetscReal alpha, PetscReal alpha2, PetscReal threshold)
5206d71ae5a4SJacob Faibussowitsch {
5207fa9f3622SBarry Smith   SNESKSPEW *kctx;
52085fd66863SKarl Rupp 
520971f87433Sdalcinl   PetscFunctionBegin;
52100700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5211fa9f3622SBarry Smith   kctx = (SNESKSPEW *)snes->kspconvctx;
52125f80ce2aSJacob Faibussowitsch   PetscCheck(kctx, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "No Eisenstat-Walker context existing");
5213c5eb9154SBarry Smith   PetscValidLogicalCollectiveInt(snes, version, 2);
5214c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, rtol_0, 3);
5215c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, rtol_max, 4);
5216c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, gamma, 5);
5217c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, alpha, 6);
5218c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, alpha2, 7);
5219c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, threshold, 8);
522071f87433Sdalcinl 
522171f87433Sdalcinl   if (version != PETSC_DEFAULT) kctx->version = version;
522213bcc0bdSJacob Faibussowitsch   if (rtol_0 != (PetscReal)PETSC_DEFAULT) kctx->rtol_0 = rtol_0;
522313bcc0bdSJacob Faibussowitsch   if (rtol_max != (PetscReal)PETSC_DEFAULT) kctx->rtol_max = rtol_max;
522413bcc0bdSJacob Faibussowitsch   if (gamma != (PetscReal)PETSC_DEFAULT) kctx->gamma = gamma;
522513bcc0bdSJacob Faibussowitsch   if (alpha != (PetscReal)PETSC_DEFAULT) kctx->alpha = alpha;
522613bcc0bdSJacob Faibussowitsch   if (alpha2 != (PetscReal)PETSC_DEFAULT) kctx->alpha2 = alpha2;
522713bcc0bdSJacob Faibussowitsch   if (threshold != (PetscReal)PETSC_DEFAULT) kctx->threshold = threshold;
522871f87433Sdalcinl 
52290f0abf79SStefano Zampini   PetscCheck(kctx->version >= 1 && kctx->version <= 4, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Only versions 1 to 4 are supported: %" PetscInt_FMT, kctx->version);
52300b121fc5SBarry Smith   PetscCheck(kctx->rtol_0 >= 0.0 && kctx->rtol_0 < 1.0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "0.0 <= rtol_0 < 1.0: %g", (double)kctx->rtol_0);
52310b121fc5SBarry Smith   PetscCheck(kctx->rtol_max >= 0.0 && kctx->rtol_max < 1.0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "0.0 <= rtol_max (%g) < 1.0", (double)kctx->rtol_max);
52320b121fc5SBarry Smith   PetscCheck(kctx->gamma >= 0.0 && kctx->gamma <= 1.0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "0.0 <= gamma (%g) <= 1.0", (double)kctx->gamma);
52330b121fc5SBarry Smith   PetscCheck(kctx->alpha > 1.0 && kctx->alpha <= 2.0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "1.0 < alpha (%g) <= 2.0", (double)kctx->alpha);
52340b121fc5SBarry Smith   PetscCheck(kctx->threshold > 0.0 && kctx->threshold < 1.0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "0.0 < threshold (%g) < 1.0", (double)kctx->threshold);
52353ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
523671f87433Sdalcinl }
523771f87433Sdalcinl 
523871f87433Sdalcinl /*@
5239fa9f3622SBarry Smith   SNESKSPGetParametersEW - Gets parameters for Eisenstat-Walker
524071f87433Sdalcinl   convergence criteria for the linear solvers within an inexact
524171f87433Sdalcinl   Newton method.
524271f87433Sdalcinl 
524371f87433Sdalcinl   Not Collective
524471f87433Sdalcinl 
524597bb3fdcSJose E. Roman   Input Parameter:
5246f6dfbefdSBarry Smith . snes - `SNES` context
524771f87433Sdalcinl 
524871f87433Sdalcinl   Output Parameters:
52490f0abf79SStefano Zampini + version   - version 1, 2 (default is 2), 3 or 4
525071f87433Sdalcinl . rtol_0    - initial relative tolerance (0 <= rtol_0 < 1)
525171f87433Sdalcinl . rtol_max  - maximum relative tolerance (0 <= rtol_max < 1)
5252bf388a1fSBarry Smith . gamma     - multiplicative factor for version 2 rtol computation (0 <= gamma2 <= 1)
525371f87433Sdalcinl . alpha     - power for version 2 rtol computation (1 < alpha <= 2)
525471f87433Sdalcinl . alpha2    - power for safeguard
525571f87433Sdalcinl - threshold - threshold for imposing safeguard (0 < threshold < 1)
525671f87433Sdalcinl 
525771f87433Sdalcinl   Level: advanced
525871f87433Sdalcinl 
52591cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESKSPSetUseEW()`, `SNESKSPGetUseEW()`, `SNESKSPSetParametersEW()`
526071f87433Sdalcinl @*/
5261d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESKSPGetParametersEW(SNES snes, PetscInt *version, PetscReal *rtol_0, PetscReal *rtol_max, PetscReal *gamma, PetscReal *alpha, PetscReal *alpha2, PetscReal *threshold)
5262d71ae5a4SJacob Faibussowitsch {
5263fa9f3622SBarry Smith   SNESKSPEW *kctx;
52645fd66863SKarl Rupp 
526571f87433Sdalcinl   PetscFunctionBegin;
52660700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5267fa9f3622SBarry Smith   kctx = (SNESKSPEW *)snes->kspconvctx;
52685f80ce2aSJacob Faibussowitsch   PetscCheck(kctx, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "No Eisenstat-Walker context existing");
526971f87433Sdalcinl   if (version) *version = kctx->version;
527071f87433Sdalcinl   if (rtol_0) *rtol_0 = kctx->rtol_0;
527171f87433Sdalcinl   if (rtol_max) *rtol_max = kctx->rtol_max;
527271f87433Sdalcinl   if (gamma) *gamma = kctx->gamma;
527371f87433Sdalcinl   if (alpha) *alpha = kctx->alpha;
527471f87433Sdalcinl   if (alpha2) *alpha2 = kctx->alpha2;
527571f87433Sdalcinl   if (threshold) *threshold = kctx->threshold;
52763ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
527771f87433Sdalcinl }
527871f87433Sdalcinl 
52795c0db29aSPierre Jolivet PetscErrorCode KSPPreSolve_SNESEW(KSP ksp, Vec b, Vec x, void *ctx)
5280d71ae5a4SJacob Faibussowitsch {
52815c0db29aSPierre Jolivet   SNES       snes = (SNES)ctx;
5282fa9f3622SBarry Smith   SNESKSPEW *kctx = (SNESKSPEW *)snes->kspconvctx;
528371f87433Sdalcinl   PetscReal  rtol = PETSC_DEFAULT, stol;
528471f87433Sdalcinl 
528571f87433Sdalcinl   PetscFunctionBegin;
52863ba16761SJacob Faibussowitsch   if (!snes->ksp_ewconv) PetscFunctionReturn(PETSC_SUCCESS);
528730058271SDmitry Karpeev   if (!snes->iter) {
528830058271SDmitry Karpeev     rtol = kctx->rtol_0; /* first time in, so use the original user rtol */
52899566063dSJacob Faibussowitsch     PetscCall(VecNorm(snes->vec_func, NORM_2, &kctx->norm_first));
52900f0abf79SStefano Zampini   } else {
52910fdf79fbSJacob Faibussowitsch     PetscCheck(kctx->version >= 1 && kctx->version <= 4, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Only versions 1-4 are supported: %" PetscInt_FMT, kctx->version);
529271f87433Sdalcinl     if (kctx->version == 1) {
52930f0abf79SStefano Zampini       rtol = PetscAbsReal(snes->norm - kctx->lresid_last) / kctx->norm_last;
529485ec1a3cSBarry Smith       stol = PetscPowReal(kctx->rtol_last, kctx->alpha2);
529571f87433Sdalcinl       if (stol > kctx->threshold) rtol = PetscMax(rtol, stol);
529671f87433Sdalcinl     } else if (kctx->version == 2) {
529785ec1a3cSBarry Smith       rtol = kctx->gamma * PetscPowReal(snes->norm / kctx->norm_last, kctx->alpha);
529885ec1a3cSBarry Smith       stol = kctx->gamma * PetscPowReal(kctx->rtol_last, kctx->alpha);
529971f87433Sdalcinl       if (stol > kctx->threshold) rtol = PetscMax(rtol, stol);
530071f87433Sdalcinl     } else if (kctx->version == 3) { /* contributed by Luis Chacon, June 2006. */
530185ec1a3cSBarry Smith       rtol = kctx->gamma * PetscPowReal(snes->norm / kctx->norm_last, kctx->alpha);
530271f87433Sdalcinl       /* safeguard: avoid sharp decrease of rtol */
530385ec1a3cSBarry Smith       stol = kctx->gamma * PetscPowReal(kctx->rtol_last, kctx->alpha);
530471f87433Sdalcinl       stol = PetscMax(rtol, stol);
530571f87433Sdalcinl       rtol = PetscMin(kctx->rtol_0, stol);
530671f87433Sdalcinl       /* safeguard: avoid oversolving */
530730058271SDmitry Karpeev       stol = kctx->gamma * (kctx->norm_first * snes->rtol) / snes->norm;
530871f87433Sdalcinl       stol = PetscMax(rtol, stol);
530971f87433Sdalcinl       rtol = PetscMin(kctx->rtol_0, stol);
53100fdf79fbSJacob Faibussowitsch     } else /* if (kctx->version == 4) */ {
53110fdf79fbSJacob Faibussowitsch       /* H.-B. An et al. Journal of Computational and Applied Mathematics 200 (2007) 47-60 */
53120f0abf79SStefano Zampini       PetscReal ared = PetscAbsReal(kctx->norm_last - snes->norm);
53130f0abf79SStefano Zampini       PetscReal pred = PetscAbsReal(kctx->norm_last - kctx->lresid_last);
53140f0abf79SStefano Zampini       PetscReal rk   = ared / pred;
53150f0abf79SStefano Zampini       if (rk < kctx->v4_p1) rtol = 1. - 2. * kctx->v4_p1;
53160f0abf79SStefano Zampini       else if (rk < kctx->v4_p2) rtol = kctx->rtol_last;
53170f0abf79SStefano Zampini       else if (rk < kctx->v4_p3) rtol = kctx->v4_m1 * kctx->rtol_last;
53180f0abf79SStefano Zampini       else rtol = kctx->v4_m2 * kctx->rtol_last;
53190f0abf79SStefano Zampini 
5320a4598233SStefano Zampini       if (kctx->rtol_last_2 > kctx->v4_m3 && kctx->rtol_last > kctx->v4_m3 && kctx->rk_last_2 < kctx->v4_p1 && kctx->rk_last < kctx->v4_p1) rtol = kctx->v4_m4 * kctx->rtol_last;
53210f0abf79SStefano Zampini       kctx->rtol_last_2 = kctx->rtol_last;
53220f0abf79SStefano Zampini       kctx->rk_last_2   = kctx->rk_last;
53230f0abf79SStefano Zampini       kctx->rk_last     = rk;
53240fdf79fbSJacob Faibussowitsch     }
53250f0abf79SStefano Zampini   }
53260f0abf79SStefano Zampini   /* safeguard: avoid rtol greater than rtol_max */
532771f87433Sdalcinl   rtol = PetscMin(rtol, kctx->rtol_max);
53289566063dSJacob Faibussowitsch   PetscCall(KSPSetTolerances(ksp, rtol, PETSC_DEFAULT, PETSC_DEFAULT, PETSC_DEFAULT));
532963a3b9bcSJacob Faibussowitsch   PetscCall(PetscInfo(snes, "iter %" PetscInt_FMT ", Eisenstat-Walker (version %" PetscInt_FMT ") KSP rtol=%g\n", snes->iter, kctx->version, (double)rtol));
53303ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
533171f87433Sdalcinl }
533271f87433Sdalcinl 
53335c0db29aSPierre Jolivet PetscErrorCode KSPPostSolve_SNESEW(KSP ksp, Vec b, Vec x, void *ctx)
5334d71ae5a4SJacob Faibussowitsch {
53355c0db29aSPierre Jolivet   SNES       snes = (SNES)ctx;
5336fa9f3622SBarry Smith   SNESKSPEW *kctx = (SNESKSPEW *)snes->kspconvctx;
533771f87433Sdalcinl   PCSide     pcside;
533871f87433Sdalcinl   Vec        lres;
533971f87433Sdalcinl 
534071f87433Sdalcinl   PetscFunctionBegin;
53413ba16761SJacob Faibussowitsch   if (!snes->ksp_ewconv) PetscFunctionReturn(PETSC_SUCCESS);
53429566063dSJacob Faibussowitsch   PetscCall(KSPGetTolerances(ksp, &kctx->rtol_last, NULL, NULL, NULL));
534371dbe336SPeter Brune   kctx->norm_last = snes->norm;
53440f0abf79SStefano Zampini   if (kctx->version == 1 || kctx->version == 4) {
53454f00ce20SMatthew G. Knepley     PC        pc;
53460f0abf79SStefano Zampini     PetscBool getRes;
53474f00ce20SMatthew G. Knepley 
53489566063dSJacob Faibussowitsch     PetscCall(KSPGetPC(ksp, &pc));
53490f0abf79SStefano Zampini     PetscCall(PetscObjectTypeCompare((PetscObject)pc, PCNONE, &getRes));
53500f0abf79SStefano Zampini     if (!getRes) {
53510f0abf79SStefano Zampini       KSPNormType normtype;
53520f0abf79SStefano Zampini 
53530f0abf79SStefano Zampini       PetscCall(KSPGetNormType(ksp, &normtype));
53540f0abf79SStefano Zampini       getRes = (PetscBool)(normtype == KSP_NORM_UNPRECONDITIONED);
53550f0abf79SStefano Zampini     }
53569566063dSJacob Faibussowitsch     PetscCall(KSPGetPCSide(ksp, &pcside));
53570f0abf79SStefano Zampini     if (pcside == PC_RIGHT || getRes) { /* KSP residual is true linear residual */
53589566063dSJacob Faibussowitsch       PetscCall(KSPGetResidualNorm(ksp, &kctx->lresid_last));
535971f87433Sdalcinl     } else {
536071f87433Sdalcinl       /* KSP residual is preconditioned residual */
536171f87433Sdalcinl       /* compute true linear residual norm */
53620f0abf79SStefano Zampini       Mat J;
53630f0abf79SStefano Zampini       PetscCall(KSPGetOperators(ksp, &J, NULL));
53649566063dSJacob Faibussowitsch       PetscCall(VecDuplicate(b, &lres));
53650f0abf79SStefano Zampini       PetscCall(MatMult(J, x, lres));
53669566063dSJacob Faibussowitsch       PetscCall(VecAYPX(lres, -1.0, b));
53679566063dSJacob Faibussowitsch       PetscCall(VecNorm(lres, NORM_2, &kctx->lresid_last));
53689566063dSJacob Faibussowitsch       PetscCall(VecDestroy(&lres));
536971f87433Sdalcinl     }
537071f87433Sdalcinl   }
53713ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
537271f87433Sdalcinl }
537371f87433Sdalcinl 
5374d4211eb9SBarry Smith /*@
5375f6dfbefdSBarry Smith   SNESGetKSP - Returns the `KSP` context for a `SNES` solver.
5376d4211eb9SBarry Smith 
5377420bcc1bSBarry Smith   Not Collective, but if `snes` is parallel, then `ksp` is parallel
5378d4211eb9SBarry Smith 
5379d4211eb9SBarry Smith   Input Parameter:
5380f6dfbefdSBarry Smith . snes - the `SNES` context
5381d4211eb9SBarry Smith 
5382d4211eb9SBarry Smith   Output Parameter:
5383f6dfbefdSBarry Smith . ksp - the `KSP` context
5384d4211eb9SBarry Smith 
5385dc4c0fb0SBarry Smith   Level: beginner
5386dc4c0fb0SBarry Smith 
5387d4211eb9SBarry Smith   Notes:
5388f6dfbefdSBarry Smith   The user can then directly manipulate the `KSP` context to set various
5389d4211eb9SBarry Smith   options, etc.  Likewise, the user can then extract and manipulate the
5390f6dfbefdSBarry Smith   `PC` contexts as well.
5391f6dfbefdSBarry Smith 
5392f6dfbefdSBarry Smith   Some `SNESType`s do not use a `KSP` but a `KSP` is still returned by this function
5393d4211eb9SBarry Smith 
53941cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `KSP`, `PC`, `KSPGetPC()`, `SNESCreate()`, `KSPCreate()`, `SNESSetKSP()`
5395d4211eb9SBarry Smith @*/
5396d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetKSP(SNES snes, KSP *ksp)
5397d71ae5a4SJacob Faibussowitsch {
539871f87433Sdalcinl   PetscFunctionBegin;
5399d4211eb9SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
54004f572ea9SToby Isaac   PetscAssertPointer(ksp, 2);
5401d4211eb9SBarry Smith 
5402d4211eb9SBarry Smith   if (!snes->ksp) {
54039566063dSJacob Faibussowitsch     PetscCall(KSPCreate(PetscObjectComm((PetscObject)snes), &snes->ksp));
54049566063dSJacob Faibussowitsch     PetscCall(PetscObjectIncrementTabLevel((PetscObject)snes->ksp, (PetscObject)snes, 1));
5405d4211eb9SBarry Smith 
54065c0db29aSPierre Jolivet     PetscCall(KSPSetPreSolve(snes->ksp, KSPPreSolve_SNESEW, snes));
54075c0db29aSPierre Jolivet     PetscCall(KSPSetPostSolve(snes->ksp, KSPPostSolve_SNESEW, snes));
5408a5c2985bSBarry Smith 
54099566063dSJacob Faibussowitsch     PetscCall(KSPMonitorSetFromOptions(snes->ksp, "-snes_monitor_ksp", "snes_preconditioned_residual", snes));
54109566063dSJacob Faibussowitsch     PetscCall(PetscObjectSetOptions((PetscObject)snes->ksp, ((PetscObject)snes)->options));
5411d4211eb9SBarry Smith   }
5412d4211eb9SBarry Smith   *ksp = snes->ksp;
54133ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
541471f87433Sdalcinl }
54156c699258SBarry Smith 
5416af0996ceSBarry Smith #include <petsc/private/dmimpl.h>
54176c699258SBarry Smith /*@
5418f6dfbefdSBarry Smith   SNESSetDM - Sets the `DM` that may be used by some nonlinear solvers or their underlying preconditioners
54196c699258SBarry Smith 
5420c3339decSBarry Smith   Logically Collective
54216c699258SBarry Smith 
54226c699258SBarry Smith   Input Parameters:
54232a808120SBarry Smith + snes - the nonlinear solver context
5424420bcc1bSBarry Smith - dm   - the `DM`, cannot be `NULL`
5425dc4c0fb0SBarry Smith 
5426dc4c0fb0SBarry Smith   Level: intermediate
54276c699258SBarry Smith 
5428f6dfbefdSBarry Smith   Note:
5429f6dfbefdSBarry Smith   A `DM` can only be used for solving one problem at a time because information about the problem is stored on the `DM`,
5430f6dfbefdSBarry Smith   even when not using interfaces like `DMSNESSetFunction()`.  Use `DMClone()` to get a distinct `DM` when solving different
5431e03a659cSJed Brown   problems using the same function space.
5432e03a659cSJed Brown 
5433420bcc1bSBarry Smith .seealso: [](ch_snes), `DM`, `SNES`, `SNESGetDM()`, `KSPSetDM()`, `KSPGetDM()`
54346c699258SBarry Smith @*/
5435d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetDM(SNES snes, DM dm)
5436d71ae5a4SJacob Faibussowitsch {
5437345fed2cSBarry Smith   KSP    ksp;
5438942e3340SBarry Smith   DMSNES sdm;
54396c699258SBarry Smith 
54406c699258SBarry Smith   PetscFunctionBegin;
54410700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
54422a808120SBarry Smith   PetscValidHeaderSpecific(dm, DM_CLASSID, 2);
54439566063dSJacob Faibussowitsch   PetscCall(PetscObjectReference((PetscObject)dm));
5444942e3340SBarry Smith   if (snes->dm) { /* Move the DMSNES context over to the new DM unless the new DM already has one */
544551f4b3c7SToby Isaac     if (snes->dm->dmsnes && !dm->dmsnes) {
54469566063dSJacob Faibussowitsch       PetscCall(DMCopyDMSNES(snes->dm, dm));
54479566063dSJacob Faibussowitsch       PetscCall(DMGetDMSNES(snes->dm, &sdm));
5448f5af7f23SKarl Rupp       if (sdm->originaldm == snes->dm) sdm->originaldm = dm; /* Grant write privileges to the replacement DM */
54496cab3a1bSJed Brown     }
54509566063dSJacob Faibussowitsch     PetscCall(DMCoarsenHookRemove(snes->dm, DMCoarsenHook_SNESVecSol, DMRestrictHook_SNESVecSol, snes));
54519566063dSJacob Faibussowitsch     PetscCall(DMDestroy(&snes->dm));
54526cab3a1bSJed Brown   }
54536c699258SBarry Smith   snes->dm     = dm;
5454116d1032SJed Brown   snes->dmAuto = PETSC_FALSE;
5455f5af7f23SKarl Rupp 
54569566063dSJacob Faibussowitsch   PetscCall(SNESGetKSP(snes, &ksp));
54579566063dSJacob Faibussowitsch   PetscCall(KSPSetDM(ksp, dm));
54589566063dSJacob Faibussowitsch   PetscCall(KSPSetDMActive(ksp, PETSC_FALSE));
5459efd4aadfSBarry Smith   if (snes->npc) {
54609566063dSJacob Faibussowitsch     PetscCall(SNESSetDM(snes->npc, snes->dm));
54619566063dSJacob Faibussowitsch     PetscCall(SNESSetNPCSide(snes, snes->npcside));
54622c155ee1SBarry Smith   }
54633ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
54646c699258SBarry Smith }
54656c699258SBarry Smith 
54666c699258SBarry Smith /*@
5467420bcc1bSBarry Smith   SNESGetDM - Gets the `DM` that may be used by some solvers/preconditioners
54686c699258SBarry Smith 
5469f6dfbefdSBarry Smith   Not Collective but dm obtained is parallel on snes
54706c699258SBarry Smith 
54716c699258SBarry Smith   Input Parameter:
5472420bcc1bSBarry Smith . snes - the `SNES` context
54736c699258SBarry Smith 
54746c699258SBarry Smith   Output Parameter:
5475420bcc1bSBarry Smith . dm - the `DM`
54766c699258SBarry Smith 
54776c699258SBarry Smith   Level: intermediate
54786c699258SBarry Smith 
5479420bcc1bSBarry Smith .seealso: [](ch_snes), `DM`, `SNES`, `SNESSetDM()`, `KSPSetDM()`, `KSPGetDM()`
54806c699258SBarry Smith @*/
5481d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetDM(SNES snes, DM *dm)
5482d71ae5a4SJacob Faibussowitsch {
54836c699258SBarry Smith   PetscFunctionBegin;
54840700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
54856cab3a1bSJed Brown   if (!snes->dm) {
54869566063dSJacob Faibussowitsch     PetscCall(DMShellCreate(PetscObjectComm((PetscObject)snes), &snes->dm));
5487116d1032SJed Brown     snes->dmAuto = PETSC_TRUE;
54886cab3a1bSJed Brown   }
54896c699258SBarry Smith   *dm = snes->dm;
54903ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
54916c699258SBarry Smith }
54920807856dSBarry Smith 
549331823bd8SMatthew G Knepley /*@
5494be95d8f1SBarry Smith   SNESSetNPC - Sets the nonlinear preconditioner to be used.
549531823bd8SMatthew G Knepley 
5496c3339decSBarry Smith   Collective
549731823bd8SMatthew G Knepley 
549831823bd8SMatthew G Knepley   Input Parameters:
5499f6dfbefdSBarry Smith + snes - iterative context obtained from `SNESCreate()`
5500420bcc1bSBarry Smith - npc  - the nonlinear preconditioner object
550131823bd8SMatthew G Knepley 
5502dc4c0fb0SBarry Smith   Level: developer
5503dc4c0fb0SBarry Smith 
550431823bd8SMatthew G Knepley   Notes:
5505f6dfbefdSBarry Smith   Use `SNESGetNPC()` to retrieve the preconditioner context (for example,
550631823bd8SMatthew G Knepley   to configure it using the API).
550731823bd8SMatthew G Knepley 
5508f6dfbefdSBarry Smith   Only some `SNESType` can use a nonlinear preconditioner
5509f6dfbefdSBarry Smith 
5510420bcc1bSBarry Smith .seealso: [](ch_snes), `SNES`, `SNESNGS`, `SNESFAS`, `SNESGetNPC()`, `SNESHasNPC()`
551131823bd8SMatthew G Knepley @*/
5512d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetNPC(SNES snes, SNES npc)
5513d71ae5a4SJacob Faibussowitsch {
551431823bd8SMatthew G Knepley   PetscFunctionBegin;
551531823bd8SMatthew G Knepley   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5516f6dfbefdSBarry Smith   PetscValidHeaderSpecific(npc, SNES_CLASSID, 2);
5517f6dfbefdSBarry Smith   PetscCheckSameComm(snes, 1, npc, 2);
5518f6dfbefdSBarry Smith   PetscCall(PetscObjectReference((PetscObject)npc));
55199566063dSJacob Faibussowitsch   PetscCall(SNESDestroy(&snes->npc));
5520f6dfbefdSBarry Smith   snes->npc = npc;
55213ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
552231823bd8SMatthew G Knepley }
552331823bd8SMatthew G Knepley 
552431823bd8SMatthew G Knepley /*@
5525f6dfbefdSBarry Smith   SNESGetNPC - Gets a nonlinear preconditioning solver SNES` to be used to precondition the original nonlinear solver.
552631823bd8SMatthew G Knepley 
5527f6dfbefdSBarry Smith   Not Collective; but any changes to the obtained the npc object must be applied collectively
552831823bd8SMatthew G Knepley 
552931823bd8SMatthew G Knepley   Input Parameter:
5530f6dfbefdSBarry Smith . snes - iterative context obtained from `SNESCreate()`
553131823bd8SMatthew G Knepley 
553231823bd8SMatthew G Knepley   Output Parameter:
5533e4094ef1SJacob Faibussowitsch . pc - preconditioner context
553431823bd8SMatthew G Knepley 
5535f6dfbefdSBarry Smith   Options Database Key:
5536f6dfbefdSBarry Smith . -npc_snes_type <type> - set the type of the `SNES` to use as the nonlinear preconditioner
5537b5badacbSBarry Smith 
5538dc4c0fb0SBarry Smith   Level: developer
5539dc4c0fb0SBarry Smith 
554095452b02SPatrick Sanan   Notes:
5541f6dfbefdSBarry Smith   If a `SNES` was previously set with `SNESSetNPC()` then that value is returned, otherwise a new `SNES` object is created.
5542be95d8f1SBarry Smith 
5543f6dfbefdSBarry Smith   The (preconditioner) `SNES` returned automatically inherits the same nonlinear function and Jacobian supplied to the original
5544f6dfbefdSBarry Smith   `SNES`
5545951fe5abSBarry Smith 
55461cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetNPC()`, `SNESHasNPC()`, `SNES`, `SNESCreate()`
554731823bd8SMatthew G Knepley @*/
5548d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetNPC(SNES snes, SNES *pc)
5549d71ae5a4SJacob Faibussowitsch {
5550a64e098fSPeter Brune   const char *optionsprefix;
555131823bd8SMatthew G Knepley 
555231823bd8SMatthew G Knepley   PetscFunctionBegin;
555331823bd8SMatthew G Knepley   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
55544f572ea9SToby Isaac   PetscAssertPointer(pc, 2);
5555efd4aadfSBarry Smith   if (!snes->npc) {
5556ec785e5bSStefano Zampini     void *ctx;
5557ec785e5bSStefano Zampini 
55589566063dSJacob Faibussowitsch     PetscCall(SNESCreate(PetscObjectComm((PetscObject)snes), &snes->npc));
55599566063dSJacob Faibussowitsch     PetscCall(PetscObjectIncrementTabLevel((PetscObject)snes->npc, (PetscObject)snes, 1));
55609566063dSJacob Faibussowitsch     PetscCall(SNESGetOptionsPrefix(snes, &optionsprefix));
55619566063dSJacob Faibussowitsch     PetscCall(SNESSetOptionsPrefix(snes->npc, optionsprefix));
55629566063dSJacob Faibussowitsch     PetscCall(SNESAppendOptionsPrefix(snes->npc, "npc_"));
5563ec785e5bSStefano Zampini     PetscCall(SNESGetApplicationContext(snes, &ctx));
5564ec785e5bSStefano Zampini     PetscCall(SNESSetApplicationContext(snes->npc, ctx));
55659566063dSJacob Faibussowitsch     PetscCall(SNESSetCountersReset(snes->npc, PETSC_FALSE));
556631823bd8SMatthew G Knepley   }
5567efd4aadfSBarry Smith   *pc = snes->npc;
55683ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
556931823bd8SMatthew G Knepley }
557031823bd8SMatthew G Knepley 
55713ad1a0b9SPatrick Farrell /*@
55723ad1a0b9SPatrick Farrell   SNESHasNPC - Returns whether a nonlinear preconditioner exists
55733ad1a0b9SPatrick Farrell 
55743ad1a0b9SPatrick Farrell   Not Collective
55753ad1a0b9SPatrick Farrell 
55763ad1a0b9SPatrick Farrell   Input Parameter:
5577f6dfbefdSBarry Smith . snes - iterative context obtained from `SNESCreate()`
55783ad1a0b9SPatrick Farrell 
55793ad1a0b9SPatrick Farrell   Output Parameter:
5580420bcc1bSBarry Smith . has_npc - whether the `SNES` has a nonlinear preconditioner or not
55813ad1a0b9SPatrick Farrell 
55823ad1a0b9SPatrick Farrell   Level: developer
55833ad1a0b9SPatrick Farrell 
55841cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetNPC()`, `SNESGetNPC()`
55853ad1a0b9SPatrick Farrell @*/
5586d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESHasNPC(SNES snes, PetscBool *has_npc)
5587d71ae5a4SJacob Faibussowitsch {
55883ad1a0b9SPatrick Farrell   PetscFunctionBegin;
55893ad1a0b9SPatrick Farrell   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5590efd4aadfSBarry Smith   *has_npc = (PetscBool)(snes->npc ? PETSC_TRUE : PETSC_FALSE);
55913ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
55923ad1a0b9SPatrick Farrell }
55933ad1a0b9SPatrick Farrell 
5594c40d0f55SPeter Brune /*@
5595420bcc1bSBarry Smith   SNESSetNPCSide - Sets the nonlinear preconditioning side.
5596c40d0f55SPeter Brune 
5597c3339decSBarry Smith   Logically Collective
5598c40d0f55SPeter Brune 
5599c40d0f55SPeter Brune   Input Parameter:
5600f6dfbefdSBarry Smith . snes - iterative context obtained from `SNESCreate()`
5601c40d0f55SPeter Brune 
5602c40d0f55SPeter Brune   Output Parameter:
5603c40d0f55SPeter Brune . side - the preconditioning side, where side is one of
5604c40d0f55SPeter Brune .vb
56052d547940SBarry Smith       PC_LEFT - left preconditioning
56062d547940SBarry Smith       PC_RIGHT - right preconditioning (default for most nonlinear solvers)
5607c40d0f55SPeter Brune .ve
5608c40d0f55SPeter Brune 
5609f6dfbefdSBarry Smith   Options Database Key:
561067b8a455SSatish Balay . -snes_npc_side <right,left> - nonlinear preconditioner side
5611c40d0f55SPeter Brune 
5612dc4c0fb0SBarry Smith   Level: intermediate
5613dc4c0fb0SBarry Smith 
5614f6dfbefdSBarry Smith   Note:
5615f6dfbefdSBarry Smith   `SNESNRICHARDSON` and `SNESNCG` only support left preconditioning.
56162d547940SBarry Smith 
5617420bcc1bSBarry Smith .seealso: [](ch_snes), `SNES`, `SNESNRICHARDSON`, `SNESNCG`, `SNESType`, `SNESGetNPCSide()`, `KSPSetPCSide()`, `PC_LEFT`, `PC_RIGHT`, `PCSide`
5618c40d0f55SPeter Brune @*/
5619d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetNPCSide(SNES snes, PCSide side)
5620d71ae5a4SJacob Faibussowitsch {
5621c40d0f55SPeter Brune   PetscFunctionBegin;
5622c40d0f55SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5623c40d0f55SPeter Brune   PetscValidLogicalCollectiveEnum(snes, side, 2);
5624b552625fSStefano Zampini   if (side == PC_SIDE_DEFAULT) side = PC_RIGHT;
562554c59aa7SJacob Faibussowitsch   PetscCheck((side == PC_LEFT) || (side == PC_RIGHT), PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_WRONG, "Only PC_LEFT and PC_RIGHT are supported");
5626efd4aadfSBarry Smith   snes->npcside = side;
56273ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
5628c40d0f55SPeter Brune }
5629c40d0f55SPeter Brune 
5630c40d0f55SPeter Brune /*@
5631be95d8f1SBarry Smith   SNESGetNPCSide - Gets the preconditioning side.
5632c40d0f55SPeter Brune 
5633c40d0f55SPeter Brune   Not Collective
5634c40d0f55SPeter Brune 
5635c40d0f55SPeter Brune   Input Parameter:
5636f6dfbefdSBarry Smith . snes - iterative context obtained from `SNESCreate()`
5637c40d0f55SPeter Brune 
5638c40d0f55SPeter Brune   Output Parameter:
5639c40d0f55SPeter Brune . side - the preconditioning side, where side is one of
5640c40d0f55SPeter Brune .vb
5641f6dfbefdSBarry Smith       `PC_LEFT` - left preconditioning
5642f6dfbefdSBarry Smith       `PC_RIGHT` - right preconditioning (default for most nonlinear solvers)
5643c40d0f55SPeter Brune .ve
5644c40d0f55SPeter Brune 
5645c40d0f55SPeter Brune   Level: intermediate
5646c40d0f55SPeter Brune 
5647420bcc1bSBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetNPCSide()`, `KSPGetPCSide()`, `PC_LEFT`, `PC_RIGHT`, `PCSide`
5648c40d0f55SPeter Brune @*/
5649d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetNPCSide(SNES snes, PCSide *side)
5650d71ae5a4SJacob Faibussowitsch {
5651c40d0f55SPeter Brune   PetscFunctionBegin;
5652c40d0f55SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
56534f572ea9SToby Isaac   PetscAssertPointer(side, 2);
5654efd4aadfSBarry Smith   *side = snes->npcside;
56553ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
5656c40d0f55SPeter Brune }
5657c40d0f55SPeter Brune 
56589e764e56SPeter Brune /*@
5659420bcc1bSBarry Smith   SNESSetLineSearch - Sets the linesearch to be used for `SNES`
56609e764e56SPeter Brune 
5661c3339decSBarry Smith   Collective
56629e764e56SPeter Brune 
56639e764e56SPeter Brune   Input Parameters:
5664f6dfbefdSBarry Smith + snes       - iterative context obtained from `SNESCreate()`
56659e764e56SPeter Brune - linesearch - the linesearch object
56669e764e56SPeter Brune 
5667dc4c0fb0SBarry Smith   Level: developer
5668dc4c0fb0SBarry Smith 
5669f6dfbefdSBarry Smith   Note:
5670420bcc1bSBarry Smith   This is almost never used, rather one uses `SNESGetLineSearch()` to retrieve the line search and set options on it
56719e764e56SPeter Brune   to configure it using the API).
56729e764e56SPeter Brune 
5673420bcc1bSBarry Smith .seealso: [](ch_snes), `SNES`, `SNESLineSearch`, `SNESGetLineSearch()`
56749e764e56SPeter Brune @*/
5675d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetLineSearch(SNES snes, SNESLineSearch linesearch)
5676d71ae5a4SJacob Faibussowitsch {
56779e764e56SPeter Brune   PetscFunctionBegin;
56789e764e56SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5679f1c6b773SPeter Brune   PetscValidHeaderSpecific(linesearch, SNESLINESEARCH_CLASSID, 2);
56809e764e56SPeter Brune   PetscCheckSameComm(snes, 1, linesearch, 2);
56819566063dSJacob Faibussowitsch   PetscCall(PetscObjectReference((PetscObject)linesearch));
56829566063dSJacob Faibussowitsch   PetscCall(SNESLineSearchDestroy(&snes->linesearch));
5683f5af7f23SKarl Rupp 
56849e764e56SPeter Brune   snes->linesearch = linesearch;
5685f5af7f23SKarl Rupp 
56863ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
56879e764e56SPeter Brune }
56889e764e56SPeter Brune 
5689a34ceb2aSJed Brown /*@
5690420bcc1bSBarry Smith   SNESGetLineSearch - Returns the line search context possibly set with `SNESSetLineSearch()`
5691f6dfbefdSBarry Smith   or creates a default line search instance associated with the `SNES` and returns it.
56929e764e56SPeter Brune 
56939e764e56SPeter Brune   Not Collective
56949e764e56SPeter Brune 
56959e764e56SPeter Brune   Input Parameter:
5696f6dfbefdSBarry Smith . snes - iterative context obtained from `SNESCreate()`
56979e764e56SPeter Brune 
56989e764e56SPeter Brune   Output Parameter:
56999e764e56SPeter Brune . linesearch - linesearch context
57009e764e56SPeter Brune 
5701162e0bf5SPeter Brune   Level: beginner
57029e764e56SPeter Brune 
57031cc06b55SBarry Smith .seealso: [](ch_snes), `SNESLineSearch`, `SNESSetLineSearch()`, `SNESLineSearchCreate()`
57049e764e56SPeter Brune @*/
5705d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetLineSearch(SNES snes, SNESLineSearch *linesearch)
5706d71ae5a4SJacob Faibussowitsch {
57079e764e56SPeter Brune   const char *optionsprefix;
57089e764e56SPeter Brune 
57099e764e56SPeter Brune   PetscFunctionBegin;
57109e764e56SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
57114f572ea9SToby Isaac   PetscAssertPointer(linesearch, 2);
57129e764e56SPeter Brune   if (!snes->linesearch) {
57139566063dSJacob Faibussowitsch     PetscCall(SNESGetOptionsPrefix(snes, &optionsprefix));
57149566063dSJacob Faibussowitsch     PetscCall(SNESLineSearchCreate(PetscObjectComm((PetscObject)snes), &snes->linesearch));
57159566063dSJacob Faibussowitsch     PetscCall(SNESLineSearchSetSNES(snes->linesearch, snes));
57169566063dSJacob Faibussowitsch     PetscCall(SNESLineSearchAppendOptionsPrefix(snes->linesearch, optionsprefix));
57179566063dSJacob Faibussowitsch     PetscCall(PetscObjectIncrementTabLevel((PetscObject)snes->linesearch, (PetscObject)snes, 1));
57189e764e56SPeter Brune   }
57199e764e56SPeter Brune   *linesearch = snes->linesearch;
57203ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
57219e764e56SPeter Brune }
5722