xref: /petsc/src/snes/interface/snes.c (revision e4094ef18e7e53fda86cf35f3a47fda48a8e77d8)
1af0996ceSBarry Smith #include <petsc/private/snesimpl.h> /*I "petscsnes.h"  I*/
207475bc1SBarry Smith #include <petscdmshell.h>
3d96771aaSLisandro Dalcin #include <petscdraw.h>
4a01aa210SMatthew G. Knepley #include <petscds.h>
534b4d3a8SMatthew G. Knepley #include <petscdmadaptor.h>
606fc46c8SMatthew G. Knepley #include <petscconvest.h>
79b94acceSBarry Smith 
8ace3abfcSBarry Smith PetscBool         SNESRegisterAllCalled = PETSC_FALSE;
90298fd71SBarry Smith PetscFunctionList SNESList              = NULL;
108ba1e511SMatthew Knepley 
118ba1e511SMatthew Knepley /* Logging support */
1222c6f798SBarry Smith PetscClassId  SNES_CLASSID, DMSNES_CLASSID;
13fc8bc0e3SRichard Tran Mills PetscLogEvent SNES_Solve, SNES_SetUp, SNES_FunctionEval, SNES_JacobianEval, SNES_NGSEval, SNES_NGSFuncEval, SNES_NPCSolve, SNES_ObjectiveEval;
14a09944afSBarry Smith 
15e113a28aSBarry Smith /*@
16dc4c0fb0SBarry Smith   SNESSetErrorIfNotConverged - Causes `SNESSolve()` to generate an error immediately if the solver has not converged.
17e113a28aSBarry Smith 
18c3339decSBarry Smith   Logically Collective
19e113a28aSBarry Smith 
20e113a28aSBarry Smith   Input Parameters:
21f6dfbefdSBarry Smith + snes - iterative context obtained from `SNESCreate()`
22f6dfbefdSBarry Smith - flg  - `PETSC_TRUE` indicates you want the error generated
23e113a28aSBarry Smith 
2420f4b53cSBarry Smith   Options Database Key:
2567b8a455SSatish Balay . -snes_error_if_not_converged <true,false> - cause an immediate error condition and stop the program if the solver does not converge
26e113a28aSBarry Smith 
27e113a28aSBarry Smith   Level: intermediate
28e113a28aSBarry Smith 
29f6dfbefdSBarry Smith   Note:
30f6dfbefdSBarry Smith   Normally PETSc continues if a solver fails to converge, you can call `SNESGetConvergedReason()` after a `SNESSolve()`
31f6dfbefdSBarry Smith   to determine if it has converged. Otherwise the solution may be inaccurate or wrong
32e113a28aSBarry Smith 
331cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetErrorIfNotConverged()`, `KSPGetErrorIfNotConverged()`, `KSPSetErrorIfNotConverged()`
34e113a28aSBarry Smith @*/
35d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetErrorIfNotConverged(SNES snes, PetscBool flg)
36d71ae5a4SJacob Faibussowitsch {
37e113a28aSBarry Smith   PetscFunctionBegin;
38e113a28aSBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
39acfcf0e5SJed Brown   PetscValidLogicalCollectiveBool(snes, flg, 2);
40e113a28aSBarry Smith   snes->errorifnotconverged = flg;
413ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
42e113a28aSBarry Smith }
43e113a28aSBarry Smith 
44e113a28aSBarry Smith /*@
45f6dfbefdSBarry Smith   SNESGetErrorIfNotConverged - Indicates if `SNESSolve()` will generate an error if the solver does not converge?
46e113a28aSBarry Smith 
47e113a28aSBarry Smith   Not Collective
48e113a28aSBarry Smith 
49e113a28aSBarry Smith   Input Parameter:
50f6dfbefdSBarry Smith . snes - iterative context obtained from `SNESCreate()`
51e113a28aSBarry Smith 
52e113a28aSBarry Smith   Output Parameter:
53f6dfbefdSBarry Smith . flag - `PETSC_TRUE` if it will generate an error, else `PETSC_FALSE`
54e113a28aSBarry Smith 
55e113a28aSBarry Smith   Level: intermediate
56e113a28aSBarry Smith 
571cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetErrorIfNotConverged()`, `KSPGetErrorIfNotConverged()`, `KSPSetErrorIfNotConverged()`
58e113a28aSBarry Smith @*/
59d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetErrorIfNotConverged(SNES snes, PetscBool *flag)
60d71ae5a4SJacob Faibussowitsch {
61e113a28aSBarry Smith   PetscFunctionBegin;
62e113a28aSBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
63534a8f05SLisandro Dalcin   PetscValidBoolPointer(flag, 2);
64e113a28aSBarry Smith   *flag = snes->errorifnotconverged;
653ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
66e113a28aSBarry Smith }
67e113a28aSBarry Smith 
684fc747eaSLawrence Mitchell /*@
69dc4c0fb0SBarry Smith   SNESSetAlwaysComputesFinalResidual - tells the `SNES` to always compute the residual (nonlinear function value) at the final solution
704fc747eaSLawrence Mitchell 
71c3339decSBarry Smith   Logically Collective
724fc747eaSLawrence Mitchell 
734fc747eaSLawrence Mitchell   Input Parameters:
74f6dfbefdSBarry Smith + snes - the shell `SNES`
75f6dfbefdSBarry Smith - flg  - `PETSC_TRUE` to always compute the residual
764fc747eaSLawrence Mitchell 
774fc747eaSLawrence Mitchell   Level: advanced
784fc747eaSLawrence Mitchell 
79f6dfbefdSBarry Smith   Note:
80f6dfbefdSBarry Smith   Some solvers (such as smoothers in a `SNESFAS`) do not need the residual computed at the final solution so skip computing it
81f6dfbefdSBarry Smith   to save time.
82f6dfbefdSBarry Smith 
831cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESGetAlwaysComputesFinalResidual()`
844fc747eaSLawrence Mitchell @*/
85d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetAlwaysComputesFinalResidual(SNES snes, PetscBool flg)
86d71ae5a4SJacob Faibussowitsch {
874fc747eaSLawrence Mitchell   PetscFunctionBegin;
884fc747eaSLawrence Mitchell   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
894fc747eaSLawrence Mitchell   snes->alwayscomputesfinalresidual = flg;
903ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
914fc747eaSLawrence Mitchell }
924fc747eaSLawrence Mitchell 
934fc747eaSLawrence Mitchell /*@
94f6dfbefdSBarry Smith   SNESGetAlwaysComputesFinalResidual - checks if the `SNES` always computes the residual at the final solution
954fc747eaSLawrence Mitchell 
96c3339decSBarry Smith   Logically Collective
974fc747eaSLawrence Mitchell 
984fc747eaSLawrence Mitchell   Input Parameter:
99f6dfbefdSBarry Smith . snes - the `SNES` context
1004fc747eaSLawrence Mitchell 
1014fc747eaSLawrence Mitchell   Output Parameter:
102f6dfbefdSBarry Smith . flg - `PETSC_TRUE` if the residual is computed
1034fc747eaSLawrence Mitchell 
1044fc747eaSLawrence Mitchell   Level: advanced
1054fc747eaSLawrence Mitchell 
1061cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetAlwaysComputesFinalResidual()`
1074fc747eaSLawrence Mitchell @*/
108d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetAlwaysComputesFinalResidual(SNES snes, PetscBool *flg)
109d71ae5a4SJacob Faibussowitsch {
1104fc747eaSLawrence Mitchell   PetscFunctionBegin;
1114fc747eaSLawrence Mitchell   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1124fc747eaSLawrence Mitchell   *flg = snes->alwayscomputesfinalresidual;
1133ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1144fc747eaSLawrence Mitchell }
1154fc747eaSLawrence Mitchell 
116e725d27bSBarry Smith /*@
117f6dfbefdSBarry Smith   SNESSetFunctionDomainError - tells `SNES` that the input vector, a proposed new solution, to your function you provided to `SNESSetFunction()` is not
118f0b84518SBarry Smith   in the functions domain. For example, a step with negative pressure.
1194936397dSBarry Smith 
120c3339decSBarry Smith   Logically Collective
1214936397dSBarry Smith 
1222fe279fdSBarry Smith   Input Parameter:
123f6dfbefdSBarry Smith . snes - the `SNES` context
1244936397dSBarry Smith 
12528529972SSatish Balay   Level: advanced
1264936397dSBarry Smith 
127ced0f3aeSBarry Smith   Notes:
128ced0f3aeSBarry Smith   If this is called the `SNESSolve()` stops iterating and returns with a `SNESConvergedReason` of `SNES_DIVERGED_FUNCTION_DOMAIN`
129ced0f3aeSBarry Smith 
130ced0f3aeSBarry Smith   You should always call `SNESGetConvergedReason()` after each `SNESSolve()` and verify if the iteration converged (positive result) or diverged (negative result).
131ced0f3aeSBarry Smith 
132f0b84518SBarry Smith   You can direct `SNES` to avoid certain steps by using `SNESVISetVariableBounds()`, `SNESVISetComputeVariableBounds()` or
133f0b84518SBarry Smith   `SNESLineSearchSetPreCheck()`, `SNESLineSearchSetPostCheck()`
134f0b84518SBarry Smith 
1351cc06b55SBarry Smith .seealso: [](ch_snes), `SNESCreate()`, `SNESSetFunction()`, `SNESFunction`, `SNESSetJacobianDomainError()`, `SNESVISetVariableBounds()`,
136ced0f3aeSBarry Smith           `SNESVISetComputeVariableBounds()`, `SNESLineSearchSetPreCheck()`, `SNESLineSearchSetPostCheck()`, `SNESConvergedReason`, `SNESGetConvergedReason()`
1374936397dSBarry Smith @*/
138d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetFunctionDomainError(SNES snes)
139d71ae5a4SJacob Faibussowitsch {
1404936397dSBarry Smith   PetscFunctionBegin;
1410700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1425f80ce2aSJacob Faibussowitsch   PetscCheck(!snes->errorifnotconverged, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "User code indicates input vector is not in the function domain");
1434936397dSBarry Smith   snes->domainerror = PETSC_TRUE;
1443ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1454936397dSBarry Smith }
1464936397dSBarry Smith 
1476a388c36SPeter Brune /*@
148f6dfbefdSBarry Smith   SNESSetJacobianDomainError - tells `SNES` that the function you provided to `SNESSetJacobian()` at the proposed step. For example there is a negative element transformation.
14907b62357SFande Kong 
150c3339decSBarry Smith   Logically Collective
15107b62357SFande Kong 
1522fe279fdSBarry Smith   Input Parameter:
153f6dfbefdSBarry Smith . snes - the `SNES` context
15407b62357SFande Kong 
15507b62357SFande Kong   Level: advanced
15607b62357SFande Kong 
157ced0f3aeSBarry Smith   Notes:
158ced0f3aeSBarry Smith   If this is called the `SNESSolve()` stops iterating and returns with a `SNESConvergedReason` of `SNES_DIVERGED_FUNCTION_DOMAIN`
159ced0f3aeSBarry Smith 
160ced0f3aeSBarry Smith   You should always call `SNESGetConvergedReason()` after each `SNESSolve()` and verify if the iteration converged (positive result) or diverged (negative result).
161ced0f3aeSBarry Smith 
162f0b84518SBarry Smith   You can direct `SNES` to avoid certain steps by using `SNESVISetVariableBounds()`, `SNESVISetComputeVariableBounds()` or
163f0b84518SBarry Smith   `SNESLineSearchSetPreCheck()`, `SNESLineSearchSetPostCheck()`
164f0b84518SBarry Smith 
1651cc06b55SBarry Smith .seealso: [](ch_snes), `SNESCreate()`, `SNESSetFunction()`, `SNESFunction()`, `SNESSetFunctionDomainError()`, `SNESVISetVariableBounds()`,
166ced0f3aeSBarry Smith           `SNESVISetComputeVariableBounds()`, `SNESLineSearchSetPreCheck()`, `SNESLineSearchSetPostCheck()`, `SNESConvergedReason`, `SNESGetConvergedReason()`
16707b62357SFande Kong @*/
168d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetJacobianDomainError(SNES snes)
169d71ae5a4SJacob Faibussowitsch {
17007b62357SFande Kong   PetscFunctionBegin;
17107b62357SFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1725f80ce2aSJacob Faibussowitsch   PetscCheck(!snes->errorifnotconverged, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "User code indicates computeJacobian does not make sense");
17307b62357SFande Kong   snes->jacobiandomainerror = PETSC_TRUE;
1743ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
17507b62357SFande Kong }
17607b62357SFande Kong 
17707b62357SFande Kong /*@
178f6dfbefdSBarry Smith   SNESSetCheckJacobianDomainError - tells `SNESSolve()` whether to check if the user called `SNESSetJacobianDomainError()` Jacobian domain error after
179f6dfbefdSBarry Smith   each Jacobian evaluation. By default, we check Jacobian domain error in the debug mode, and do not check it in the optimized mode.
180b351a90bSFande Kong 
181c3339decSBarry Smith   Logically Collective
182b351a90bSFande Kong 
183b351a90bSFande Kong   Input Parameters:
18420f4b53cSBarry Smith + snes - the `SNES` context
185f6dfbefdSBarry Smith - flg  - indicates if or not to check Jacobian domain error after each Jacobian evaluation
186b351a90bSFande Kong 
187b351a90bSFande Kong   Level: advanced
188b351a90bSFande Kong 
189f6dfbefdSBarry Smith   Note:
190f6dfbefdSBarry Smith   Checks require one extra parallel synchronization for each Jacobian evaluation
191f6dfbefdSBarry Smith 
1921cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESConvergedReason`, `SNESCreate()`, `SNESSetFunction()`, `SNESFunction()`, `SNESSetFunctionDomainError()`, `SNESGetCheckJacobianDomainError()`
193b351a90bSFande Kong @*/
194d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetCheckJacobianDomainError(SNES snes, PetscBool flg)
195d71ae5a4SJacob Faibussowitsch {
196b351a90bSFande Kong   PetscFunctionBegin;
197b351a90bSFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
198b351a90bSFande Kong   snes->checkjacdomainerror = flg;
1993ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
200b351a90bSFande Kong }
201b351a90bSFande Kong 
202b351a90bSFande Kong /*@
2038383d7d7SFande Kong   SNESGetCheckJacobianDomainError - Get an indicator whether or not we are checking Jacobian domain errors after each Jacobian evaluation.
2048383d7d7SFande Kong 
205c3339decSBarry Smith   Logically Collective
2068383d7d7SFande Kong 
2072fe279fdSBarry Smith   Input Parameter:
208f6dfbefdSBarry Smith . snes - the `SNES` context
2098383d7d7SFande Kong 
2102fe279fdSBarry Smith   Output Parameter:
211f6dfbefdSBarry Smith . flg - `PETSC_FALSE` indicates that we don't check Jacobian domain errors after each Jacobian evaluation
2128383d7d7SFande Kong 
2138383d7d7SFande Kong   Level: advanced
2148383d7d7SFande Kong 
2151cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESCreate()`, `SNESSetFunction()`, `SNESFunction()`, `SNESSetFunctionDomainError()`, `SNESSetCheckJacobianDomainError()`
2168383d7d7SFande Kong @*/
217d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetCheckJacobianDomainError(SNES snes, PetscBool *flg)
218d71ae5a4SJacob Faibussowitsch {
2198383d7d7SFande Kong   PetscFunctionBegin;
2208383d7d7SFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
221534a8f05SLisandro Dalcin   PetscValidBoolPointer(flg, 2);
2228383d7d7SFande Kong   *flg = snes->checkjacdomainerror;
2233ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2248383d7d7SFande Kong }
2258383d7d7SFande Kong 
2268383d7d7SFande Kong /*@
227f6dfbefdSBarry Smith   SNESGetFunctionDomainError - Gets the status of the domain error after a call to `SNESComputeFunction()`;
2286a388c36SPeter Brune 
229f6dfbefdSBarry Smith   Logically Collective
2306a388c36SPeter Brune 
2312fe279fdSBarry Smith   Input Parameter:
232f6dfbefdSBarry Smith . snes - the `SNES` context
2336a388c36SPeter Brune 
2342fe279fdSBarry Smith   Output Parameter:
235f6dfbefdSBarry Smith . domainerror - Set to `PETSC_TRUE` if there's a domain error; `PETSC_FALSE` otherwise.
2366a388c36SPeter Brune 
237f6dfbefdSBarry Smith   Level: developer
2386a388c36SPeter Brune 
2391cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetFunctionDomainError()`, `SNESComputeFunction()`
2406a388c36SPeter Brune @*/
241d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetFunctionDomainError(SNES snes, PetscBool *domainerror)
242d71ae5a4SJacob Faibussowitsch {
2436a388c36SPeter Brune   PetscFunctionBegin;
2446a388c36SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
245534a8f05SLisandro Dalcin   PetscValidBoolPointer(domainerror, 2);
2466a388c36SPeter Brune   *domainerror = snes->domainerror;
2473ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2486a388c36SPeter Brune }
2496a388c36SPeter Brune 
25007b62357SFande Kong /*@
251f6dfbefdSBarry Smith   SNESGetJacobianDomainError - Gets the status of the Jacobian domain error after a call to `SNESComputeJacobian()`;
25207b62357SFande Kong 
253c3339decSBarry Smith   Logically Collective
25407b62357SFande Kong 
2552fe279fdSBarry Smith   Input Parameter:
256f6dfbefdSBarry Smith . snes - the `SNES` context
25707b62357SFande Kong 
2582fe279fdSBarry Smith   Output Parameter:
259f6dfbefdSBarry Smith . domainerror - Set to `PETSC_TRUE` if there's a Jacobian domain error; `PETSC_FALSE` otherwise.
26007b62357SFande Kong 
26107b62357SFande Kong   Level: advanced
26207b62357SFande Kong 
2631cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetFunctionDomainError()`, `SNESComputeFunction()`, `SNESGetFunctionDomainError()`
26407b62357SFande Kong @*/
265d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetJacobianDomainError(SNES snes, PetscBool *domainerror)
266d71ae5a4SJacob Faibussowitsch {
26707b62357SFande Kong   PetscFunctionBegin;
26807b62357SFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
269534a8f05SLisandro Dalcin   PetscValidBoolPointer(domainerror, 2);
27007b62357SFande Kong   *domainerror = snes->jacobiandomainerror;
2713ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
27207b62357SFande Kong }
27307b62357SFande Kong 
27455849f57SBarry Smith /*@C
275f6dfbefdSBarry Smith   SNESLoad - Loads a `SNES` that has been stored in `PETSCVIEWERBINARY` with `SNESView()`.
27655849f57SBarry Smith 
277c3339decSBarry Smith   Collective
27855849f57SBarry Smith 
27955849f57SBarry Smith   Input Parameters:
280*e4094ef1SJacob Faibussowitsch + snes   - the newly loaded `SNES`, this needs to have been created with `SNESCreate()` or
281f6dfbefdSBarry Smith            some related function before a call to `SNESLoad()`.
282f6dfbefdSBarry Smith - viewer - binary file viewer, obtained from `PetscViewerBinaryOpen()`
28355849f57SBarry Smith 
28455849f57SBarry Smith   Level: intermediate
28555849f57SBarry Smith 
286f6dfbefdSBarry Smith   Note:
287f6dfbefdSBarry Smith   The type is determined by the data in the file, any type set into the `SNES` before this call is ignored.
28855849f57SBarry Smith 
2891cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `PetscViewer`, `SNESCreate()`, `SNESType`, `PetscViewerBinaryOpen()`, `SNESView()`, `MatLoad()`, `VecLoad()`
29055849f57SBarry Smith @*/
291d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESLoad(SNES snes, PetscViewer viewer)
292d71ae5a4SJacob Faibussowitsch {
29355849f57SBarry Smith   PetscBool isbinary;
294060da220SMatthew G. Knepley   PetscInt  classid;
29555849f57SBarry Smith   char      type[256];
29655849f57SBarry Smith   KSP       ksp;
2972d53ad75SBarry Smith   DM        dm;
2982d53ad75SBarry Smith   DMSNES    dmsnes;
29955849f57SBarry Smith 
30055849f57SBarry Smith   PetscFunctionBegin;
3012d53ad75SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
30255849f57SBarry Smith   PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2);
3039566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary));
3045f80ce2aSJacob Faibussowitsch   PetscCheck(isbinary, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Invalid viewer; open viewer with PetscViewerBinaryOpen()");
30555849f57SBarry Smith 
3069566063dSJacob Faibussowitsch   PetscCall(PetscViewerBinaryRead(viewer, &classid, 1, NULL, PETSC_INT));
3075f80ce2aSJacob Faibussowitsch   PetscCheck(classid == SNES_FILE_CLASSID, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_WRONG, "Not SNES next in file");
3089566063dSJacob Faibussowitsch   PetscCall(PetscViewerBinaryRead(viewer, type, 256, NULL, PETSC_CHAR));
3099566063dSJacob Faibussowitsch   PetscCall(SNESSetType(snes, type));
310dbbe0bcdSBarry Smith   PetscTryTypeMethod(snes, load, viewer);
3119566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
3129566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &dmsnes));
3139566063dSJacob Faibussowitsch   PetscCall(DMSNESLoad(dmsnes, viewer));
3149566063dSJacob Faibussowitsch   PetscCall(SNESGetKSP(snes, &ksp));
3159566063dSJacob Faibussowitsch   PetscCall(KSPLoad(ksp, viewer));
3163ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
31755849f57SBarry Smith }
3186a388c36SPeter Brune 
3199804daf3SBarry Smith #include <petscdraw.h>
320e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS)
321e04113cfSBarry Smith   #include <petscviewersaws.h>
322bfb97211SBarry Smith #endif
3238404b7f3SBarry Smith 
324fe2efc57SMark /*@C
325dc4c0fb0SBarry Smith   SNESViewFromOptions - View a `SNES` based on values in the options database
326fe2efc57SMark 
327c3339decSBarry Smith   Collective
328fe2efc57SMark 
329fe2efc57SMark   Input Parameters:
330f6dfbefdSBarry Smith + A    - the `SNES` context
331dc4c0fb0SBarry Smith . obj  - Optional object that provides the options prefix for the checks
332736c3998SJose E. Roman - name - command line option
333fe2efc57SMark 
334fe2efc57SMark   Level: intermediate
335f6dfbefdSBarry Smith 
3361cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESView`, `PetscObjectViewFromOptions()`, `SNESCreate()`
337fe2efc57SMark @*/
338d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESViewFromOptions(SNES A, PetscObject obj, const char name[])
339d71ae5a4SJacob Faibussowitsch {
340fe2efc57SMark   PetscFunctionBegin;
341fe2efc57SMark   PetscValidHeaderSpecific(A, SNES_CLASSID, 1);
3429566063dSJacob Faibussowitsch   PetscCall(PetscObjectViewFromOptions((PetscObject)A, obj, name));
3433ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
344fe2efc57SMark }
345fe2efc57SMark 
346789d8953SBarry Smith PETSC_EXTERN PetscErrorCode SNESComputeJacobian_DMDA(SNES, Vec, Mat, Mat, void *);
347789d8953SBarry Smith 
3487e2c5f70SBarry Smith /*@C
349dc4c0fb0SBarry Smith   SNESView - Prints or visualizes the `SNES` data structure.
3509b94acceSBarry Smith 
351c3339decSBarry Smith   Collective
352fee21e36SBarry Smith 
353c7afd0dbSLois Curfman McInnes   Input Parameters:
354f6dfbefdSBarry Smith + snes   - the `SNES` context
355f6dfbefdSBarry Smith - viewer - the `PetscViewer`
356c7afd0dbSLois Curfman McInnes 
3579b94acceSBarry Smith   Options Database Key:
358f6dfbefdSBarry Smith . -snes_view - Calls `SNESView()` at end of `SNESSolve()`
3599b94acceSBarry Smith 
360dc4c0fb0SBarry Smith   Level: beginner
361dc4c0fb0SBarry Smith 
3629b94acceSBarry Smith   Notes:
3639b94acceSBarry Smith   The available visualization contexts include
364f6dfbefdSBarry Smith +     `PETSC_VIEWER_STDOUT_SELF` - standard output (default)
365f6dfbefdSBarry Smith -     `PETSC_VIEWER_STDOUT_WORLD` - synchronized standard
366c8a8ba5cSLois Curfman McInnes   output where only the first processor opens
367c8a8ba5cSLois Curfman McInnes   the file.  All other processors send their
368c8a8ba5cSLois Curfman McInnes   data to the first processor to print.
3699b94acceSBarry Smith 
370052bf0daSPierre Jolivet   The available formats include
371f6dfbefdSBarry Smith +     `PETSC_VIEWER_DEFAULT` - standard output (default)
372f6dfbefdSBarry Smith -     `PETSC_VIEWER_ASCII_INFO_DETAIL` - more verbose output for `SNESNASM`
373052bf0daSPierre Jolivet 
3743e081fefSLois Curfman McInnes   The user can open an alternative visualization context with
375f6dfbefdSBarry Smith   `PetscViewerASCIIOpen()` - output to a specified file.
3769b94acceSBarry Smith 
377f6dfbefdSBarry Smith   In the debugger you can do "call `SNESView`(snes,0)" to display the `SNES` solver. (The same holds for any PETSc object viewer).
378595c91d4SBarry Smith 
3791cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESLoad()`, `SNESCreate()`, `PetscViewerASCIIOpen()`
3809b94acceSBarry Smith @*/
381d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESView(SNES snes, PetscViewer viewer)
382d71ae5a4SJacob Faibussowitsch {
383fa9f3622SBarry Smith   SNESKSPEW     *kctx;
38494b7f48cSBarry Smith   KSP            ksp;
3857f1410a3SPeter Brune   SNESLineSearch linesearch;
38672a02f06SBarry Smith   PetscBool      iascii, isstring, isbinary, isdraw;
3872d53ad75SBarry Smith   DMSNES         dmsnes;
388e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS)
389536b137fSBarry Smith   PetscBool issaws;
390bfb97211SBarry Smith #endif
3919b94acceSBarry Smith 
3923a40ed3dSBarry Smith   PetscFunctionBegin;
3930700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
39448a46eb9SPierre Jolivet   if (!viewer) PetscCall(PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)snes), &viewer));
3950700a824SBarry Smith   PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2);
396c9780b6fSBarry Smith   PetscCheckSameComm(snes, 1, viewer, 2);
39774679c65SBarry Smith 
3989566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii));
3999566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSTRING, &isstring));
4009566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary));
4019566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw));
402e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS)
4039566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSAWS, &issaws));
404bfb97211SBarry Smith #endif
40532077d6dSBarry Smith   if (iascii) {
406dc0571f2SMatthew G. Knepley     SNESNormSchedule normschedule;
4078404b7f3SBarry Smith     DM               dm;
4088404b7f3SBarry Smith     PetscErrorCode (*cJ)(SNES, Vec, Mat, Mat, void *);
4098404b7f3SBarry Smith     void       *ctx;
410789d8953SBarry Smith     const char *pre = "";
411dc0571f2SMatthew G. Knepley 
4129566063dSJacob Faibussowitsch     PetscCall(PetscObjectPrintClassNamePrefixType((PetscObject)snes, viewer));
41348a46eb9SPierre Jolivet     if (!snes->setupcalled) PetscCall(PetscViewerASCIIPrintf(viewer, "  SNES has not been set up so information may be incomplete\n"));
414e7788613SBarry Smith     if (snes->ops->view) {
4159566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPushTab(viewer));
416dbbe0bcdSBarry Smith       PetscUseTypeMethod(snes, view, viewer);
4179566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPopTab(viewer));
4180ef38995SBarry Smith     }
41963a3b9bcSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "  maximum iterations=%" PetscInt_FMT ", maximum function evaluations=%" PetscInt_FMT "\n", snes->max_its, snes->max_funcs));
4209566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "  tolerances: relative=%g, absolute=%g, solution=%g\n", (double)snes->rtol, (double)snes->abstol, (double)snes->stol));
42148a46eb9SPierre Jolivet     if (snes->usesksp) PetscCall(PetscViewerASCIIPrintf(viewer, "  total number of linear solver iterations=%" PetscInt_FMT "\n", snes->linear_its));
42263a3b9bcSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "  total number of function evaluations=%" PetscInt_FMT "\n", snes->nfuncs));
4239566063dSJacob Faibussowitsch     PetscCall(SNESGetNormSchedule(snes, &normschedule));
4249566063dSJacob Faibussowitsch     if (normschedule > 0) PetscCall(PetscViewerASCIIPrintf(viewer, "  norm schedule %s\n", SNESNormSchedules[normschedule]));
42548a46eb9SPierre Jolivet     if (snes->gridsequence) PetscCall(PetscViewerASCIIPrintf(viewer, "  total number of grid sequence refinements=%" PetscInt_FMT "\n", snes->gridsequence));
4269b94acceSBarry Smith     if (snes->ksp_ewconv) {
427fa9f3622SBarry Smith       kctx = (SNESKSPEW *)snes->kspconvctx;
4289b94acceSBarry Smith       if (kctx) {
42963a3b9bcSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "  Eisenstat-Walker computation of KSP relative tolerance (version %" PetscInt_FMT ")\n", kctx->version));
4309566063dSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "    rtol_0=%g, rtol_max=%g, threshold=%g\n", (double)kctx->rtol_0, (double)kctx->rtol_max, (double)kctx->threshold));
4319566063dSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "    gamma=%g, alpha=%g, alpha2=%g\n", (double)kctx->gamma, (double)kctx->alpha, (double)kctx->alpha2));
4329b94acceSBarry Smith       }
4339b94acceSBarry Smith     }
434eb1f6c34SBarry Smith     if (snes->lagpreconditioner == -1) {
4359566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Preconditioned is never rebuilt\n"));
436eb1f6c34SBarry Smith     } else if (snes->lagpreconditioner > 1) {
43763a3b9bcSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Preconditioned is rebuilt every %" PetscInt_FMT " new Jacobians\n", snes->lagpreconditioner));
438eb1f6c34SBarry Smith     }
439eb1f6c34SBarry Smith     if (snes->lagjacobian == -1) {
4409566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Jacobian is never rebuilt\n"));
441eb1f6c34SBarry Smith     } else if (snes->lagjacobian > 1) {
44263a3b9bcSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Jacobian is rebuilt every %" PetscInt_FMT " SNES iterations\n", snes->lagjacobian));
443eb1f6c34SBarry Smith     }
4449566063dSJacob Faibussowitsch     PetscCall(SNESGetDM(snes, &dm));
4459566063dSJacob Faibussowitsch     PetscCall(DMSNESGetJacobian(dm, &cJ, &ctx));
446789d8953SBarry Smith     if (snes->mf_operator) {
4479566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Jacobian is applied matrix-free with differencing\n"));
448789d8953SBarry Smith       pre = "Preconditioning ";
449789d8953SBarry Smith     }
4508404b7f3SBarry Smith     if (cJ == SNESComputeJacobianDefault) {
4519566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  %sJacobian is built using finite differences one column at a time\n", pre));
4528404b7f3SBarry Smith     } else if (cJ == SNESComputeJacobianDefaultColor) {
4539566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  %sJacobian is built using finite differences with coloring\n", pre));
454789d8953SBarry Smith       /* it slightly breaks data encapsulation for access the DMDA information directly */
455789d8953SBarry Smith     } else if (cJ == SNESComputeJacobian_DMDA) {
456789d8953SBarry Smith       MatFDColoring fdcoloring;
4579566063dSJacob Faibussowitsch       PetscCall(PetscObjectQuery((PetscObject)dm, "DMDASNES_FDCOLORING", (PetscObject *)&fdcoloring));
458789d8953SBarry Smith       if (fdcoloring) {
4599566063dSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "  %sJacobian is built using colored finite differences on a DMDA\n", pre));
460789d8953SBarry Smith       } else {
4619566063dSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "  %sJacobian is built using a DMDA local Jacobian\n", pre));
462789d8953SBarry Smith       }
463996e1cbcSBarry Smith     } else if (snes->mf && !snes->mf_operator) {
4649566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Jacobian is applied matrix-free with differencing, no explicit Jacobian\n"));
4658404b7f3SBarry Smith     }
4660f5bd95cSBarry Smith   } else if (isstring) {
467317d6ea6SBarry Smith     const char *type;
4689566063dSJacob Faibussowitsch     PetscCall(SNESGetType(snes, &type));
4699566063dSJacob Faibussowitsch     PetscCall(PetscViewerStringSPrintf(viewer, " SNESType: %-7.7s", type));
470dbbe0bcdSBarry Smith     PetscTryTypeMethod(snes, view, viewer);
47155849f57SBarry Smith   } else if (isbinary) {
47255849f57SBarry Smith     PetscInt    classid = SNES_FILE_CLASSID;
47355849f57SBarry Smith     MPI_Comm    comm;
47455849f57SBarry Smith     PetscMPIInt rank;
47555849f57SBarry Smith     char        type[256];
47655849f57SBarry Smith 
4779566063dSJacob Faibussowitsch     PetscCall(PetscObjectGetComm((PetscObject)snes, &comm));
4789566063dSJacob Faibussowitsch     PetscCallMPI(MPI_Comm_rank(comm, &rank));
479dd400576SPatrick Sanan     if (rank == 0) {
4809566063dSJacob Faibussowitsch       PetscCall(PetscViewerBinaryWrite(viewer, &classid, 1, PETSC_INT));
4819566063dSJacob Faibussowitsch       PetscCall(PetscStrncpy(type, ((PetscObject)snes)->type_name, sizeof(type)));
4829566063dSJacob Faibussowitsch       PetscCall(PetscViewerBinaryWrite(viewer, type, sizeof(type), PETSC_CHAR));
48355849f57SBarry Smith     }
484dbbe0bcdSBarry Smith     PetscTryTypeMethod(snes, view, viewer);
48572a02f06SBarry Smith   } else if (isdraw) {
48672a02f06SBarry Smith     PetscDraw draw;
48772a02f06SBarry Smith     char      str[36];
48889fd9fafSBarry Smith     PetscReal x, y, bottom, h;
48972a02f06SBarry Smith 
4909566063dSJacob Faibussowitsch     PetscCall(PetscViewerDrawGetDraw(viewer, 0, &draw));
4919566063dSJacob Faibussowitsch     PetscCall(PetscDrawGetCurrentPoint(draw, &x, &y));
4929566063dSJacob Faibussowitsch     PetscCall(PetscStrncpy(str, "SNES: ", sizeof(str)));
4939566063dSJacob Faibussowitsch     PetscCall(PetscStrlcat(str, ((PetscObject)snes)->type_name, sizeof(str)));
4949566063dSJacob Faibussowitsch     PetscCall(PetscDrawStringBoxed(draw, x, y, PETSC_DRAW_BLUE, PETSC_DRAW_BLACK, str, NULL, &h));
49589fd9fafSBarry Smith     bottom = y - h;
4969566063dSJacob Faibussowitsch     PetscCall(PetscDrawPushCurrentPoint(draw, x, bottom));
497dbbe0bcdSBarry Smith     PetscTryTypeMethod(snes, view, viewer);
498e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS)
499536b137fSBarry Smith   } else if (issaws) {
500d45a07a7SBarry Smith     PetscMPIInt rank;
5012657e9d9SBarry Smith     const char *name;
502d45a07a7SBarry Smith 
5039566063dSJacob Faibussowitsch     PetscCall(PetscObjectGetName((PetscObject)snes, &name));
5049566063dSJacob Faibussowitsch     PetscCallMPI(MPI_Comm_rank(PETSC_COMM_WORLD, &rank));
505dd400576SPatrick Sanan     if (!((PetscObject)snes)->amsmem && rank == 0) {
506d45a07a7SBarry Smith       char dir[1024];
507d45a07a7SBarry Smith 
5089566063dSJacob Faibussowitsch       PetscCall(PetscObjectViewSAWs((PetscObject)snes, viewer));
5099566063dSJacob Faibussowitsch       PetscCall(PetscSNPrintf(dir, 1024, "/PETSc/Objects/%s/its", name));
510792fecdfSBarry Smith       PetscCallSAWs(SAWs_Register, (dir, &snes->iter, 1, SAWs_READ, SAWs_INT));
51148a46eb9SPierre Jolivet       if (!snes->conv_hist) PetscCall(SNESSetConvergenceHistory(snes, NULL, NULL, PETSC_DECIDE, PETSC_TRUE));
5129566063dSJacob Faibussowitsch       PetscCall(PetscSNPrintf(dir, 1024, "/PETSc/Objects/%s/conv_hist", name));
513792fecdfSBarry Smith       PetscCallSAWs(SAWs_Register, (dir, snes->conv_hist, 10, SAWs_READ, SAWs_DOUBLE));
514f05ece33SBarry Smith     }
515bfb97211SBarry Smith #endif
51672a02f06SBarry Smith   }
51772a02f06SBarry Smith   if (snes->linesearch) {
5189566063dSJacob Faibussowitsch     PetscCall(SNESGetLineSearch(snes, &linesearch));
5199566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPushTab(viewer));
5209566063dSJacob Faibussowitsch     PetscCall(SNESLineSearchView(linesearch, viewer));
5219566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPopTab(viewer));
52219bcc07fSBarry Smith   }
523efd4aadfSBarry Smith   if (snes->npc && snes->usesnpc) {
5249566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPushTab(viewer));
5259566063dSJacob Faibussowitsch     PetscCall(SNESView(snes->npc, viewer));
5269566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPopTab(viewer));
5274a0c5b0cSMatthew G Knepley   }
5289566063dSJacob Faibussowitsch   PetscCall(PetscViewerASCIIPushTab(viewer));
5299566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(snes->dm, &dmsnes));
5309566063dSJacob Faibussowitsch   PetscCall(DMSNESView(dmsnes, viewer));
5319566063dSJacob Faibussowitsch   PetscCall(PetscViewerASCIIPopTab(viewer));
5322c155ee1SBarry Smith   if (snes->usesksp) {
5339566063dSJacob Faibussowitsch     PetscCall(SNESGetKSP(snes, &ksp));
5349566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPushTab(viewer));
5359566063dSJacob Faibussowitsch     PetscCall(KSPView(ksp, viewer));
5369566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPopTab(viewer));
5372c155ee1SBarry Smith   }
53872a02f06SBarry Smith   if (isdraw) {
53972a02f06SBarry Smith     PetscDraw draw;
5409566063dSJacob Faibussowitsch     PetscCall(PetscViewerDrawGetDraw(viewer, 0, &draw));
5419566063dSJacob Faibussowitsch     PetscCall(PetscDrawPopCurrentPoint(draw));
5427f1410a3SPeter Brune   }
5433ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
5449b94acceSBarry Smith }
5459b94acceSBarry Smith 
54676b2cf59SMatthew Knepley /*
54776b2cf59SMatthew Knepley   We retain a list of functions that also take SNES command
54876b2cf59SMatthew Knepley   line options. These are called at the end SNESSetFromOptions()
54976b2cf59SMatthew Knepley */
55076b2cf59SMatthew Knepley #define MAXSETFROMOPTIONS 5
551a7cc72afSBarry Smith static PetscInt numberofsetfromoptions;
5526849ba73SBarry Smith static PetscErrorCode (*othersetfromoptions[MAXSETFROMOPTIONS])(SNES);
55376b2cf59SMatthew Knepley 
554ac226902SBarry Smith /*@C
555f6dfbefdSBarry Smith   SNESAddOptionsChecker - Adds an additional function to check for `SNES` options.
55676b2cf59SMatthew Knepley 
55776b2cf59SMatthew Knepley   Not Collective
55876b2cf59SMatthew Knepley 
55976b2cf59SMatthew Knepley   Input Parameter:
56076b2cf59SMatthew Knepley . snescheck - function that checks for options
56176b2cf59SMatthew Knepley 
56276b2cf59SMatthew Knepley   Level: developer
56376b2cf59SMatthew Knepley 
5641cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetFromOptions()`
56576b2cf59SMatthew Knepley @*/
566d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESAddOptionsChecker(PetscErrorCode (*snescheck)(SNES))
567d71ae5a4SJacob Faibussowitsch {
56876b2cf59SMatthew Knepley   PetscFunctionBegin;
56963a3b9bcSJacob Faibussowitsch   PetscCheck(numberofsetfromoptions < MAXSETFROMOPTIONS, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Too many options checkers, only %d allowed", MAXSETFROMOPTIONS);
57076b2cf59SMatthew Knepley   othersetfromoptions[numberofsetfromoptions++] = snescheck;
5713ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
57276b2cf59SMatthew Knepley }
57376b2cf59SMatthew Knepley 
574d71ae5a4SJacob Faibussowitsch static PetscErrorCode SNESSetUpMatrixFree_Private(SNES snes, PetscBool hasOperator, PetscInt version)
575d71ae5a4SJacob Faibussowitsch {
576aa3661deSLisandro Dalcin   Mat          J;
577895c21f2SBarry Smith   MatNullSpace nullsp;
578aa3661deSLisandro Dalcin 
579aa3661deSLisandro Dalcin   PetscFunctionBegin;
5800700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
581aa3661deSLisandro Dalcin 
58298613b67SLisandro Dalcin   if (!snes->vec_func && (snes->jacobian || snes->jacobian_pre)) {
58398613b67SLisandro Dalcin     Mat A = snes->jacobian, B = snes->jacobian_pre;
5849566063dSJacob Faibussowitsch     PetscCall(MatCreateVecs(A ? A : B, NULL, &snes->vec_func));
58598613b67SLisandro Dalcin   }
58698613b67SLisandro Dalcin 
5870fdf79fbSJacob Faibussowitsch   PetscCheck(version == 1 || version == 2, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "matrix-free operator routines, only version 1 and 2");
588aa3661deSLisandro Dalcin   if (version == 1) {
5899566063dSJacob Faibussowitsch     PetscCall(MatCreateSNESMF(snes, &J));
5909566063dSJacob Faibussowitsch     PetscCall(MatMFFDSetOptionsPrefix(J, ((PetscObject)snes)->prefix));
5919566063dSJacob Faibussowitsch     PetscCall(MatSetFromOptions(J));
5921e2ae407SBarry Smith     /* TODO: the version 2 code should be merged into the MatCreateSNESMF() and MatCreateMFFD() infrastructure and then removed */
5930fdf79fbSJacob Faibussowitsch   } else /* if (version == 2) */ {
5945f80ce2aSJacob Faibussowitsch     PetscCheck(snes->vec_func, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "SNESSetFunction() must be called first");
595570b7f6dSBarry Smith #if !defined(PETSC_USE_COMPLEX) && !defined(PETSC_USE_REAL_SINGLE) && !defined(PETSC_USE_REAL___FLOAT128) && !defined(PETSC_USE_REAL___FP16)
596f6dfbefdSBarry Smith     PetscCall(MatCreateSNESMFMore(snes, snes->vec_func, &J));
597aa3661deSLisandro Dalcin #else
5982479783cSJose E. Roman     SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "matrix-free operator routines (version 2)");
599aa3661deSLisandro Dalcin #endif
6000fdf79fbSJacob Faibussowitsch   }
601aa3661deSLisandro Dalcin 
602895c21f2SBarry Smith   /* attach any user provided null space that was on Amat to the newly created matrix free matrix */
603895c21f2SBarry Smith   if (snes->jacobian) {
6049566063dSJacob Faibussowitsch     PetscCall(MatGetNullSpace(snes->jacobian, &nullsp));
6051baa6e33SBarry Smith     if (nullsp) PetscCall(MatSetNullSpace(J, nullsp));
606895c21f2SBarry Smith   }
607895c21f2SBarry Smith 
60863a3b9bcSJacob Faibussowitsch   PetscCall(PetscInfo(snes, "Setting default matrix-free operator routines (version %" PetscInt_FMT ")\n", version));
609d3462f78SMatthew Knepley   if (hasOperator) {
610aa3661deSLisandro Dalcin     /* This version replaces the user provided Jacobian matrix with a
611aa3661deSLisandro Dalcin        matrix-free version but still employs the user-provided preconditioner matrix. */
6129566063dSJacob Faibussowitsch     PetscCall(SNESSetJacobian(snes, J, NULL, NULL, NULL));
613aa3661deSLisandro Dalcin   } else {
614aa3661deSLisandro Dalcin     /* This version replaces both the user-provided Jacobian and the user-
6153232da50SPeter Brune      provided preconditioner Jacobian with the default matrix free version. */
616b552625fSStefano Zampini     if (snes->npcside == PC_LEFT && snes->npc) {
6179566063dSJacob Faibussowitsch       if (!snes->jacobian) PetscCall(SNESSetJacobian(snes, J, NULL, NULL, NULL));
618172a4300SPeter Brune     } else {
619789d8953SBarry Smith       KSP       ksp;
620789d8953SBarry Smith       PC        pc;
621789d8953SBarry Smith       PetscBool match;
622789d8953SBarry Smith 
6239566063dSJacob Faibussowitsch       PetscCall(SNESSetJacobian(snes, J, J, MatMFFDComputeJacobian, NULL));
624aa3661deSLisandro Dalcin       /* Force no preconditioner */
6259566063dSJacob Faibussowitsch       PetscCall(SNESGetKSP(snes, &ksp));
6269566063dSJacob Faibussowitsch       PetscCall(KSPGetPC(ksp, &pc));
6272698c518SLisandro Dalcin       PetscCall(PetscObjectTypeCompareAny((PetscObject)pc, &match, PCSHELL, PCH2OPUS, ""));
628aa3661deSLisandro Dalcin       if (!match) {
6299566063dSJacob Faibussowitsch         PetscCall(PetscInfo(snes, "Setting default matrix-free preconditioner routines\nThat is no preconditioner is being used\n"));
6309566063dSJacob Faibussowitsch         PetscCall(PCSetType(pc, PCNONE));
631aa3661deSLisandro Dalcin       }
632aa3661deSLisandro Dalcin     }
633789d8953SBarry Smith   }
6349566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&J));
6353ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
636aa3661deSLisandro Dalcin }
637aa3661deSLisandro Dalcin 
638d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMRestrictHook_SNESVecSol(DM dmfine, Mat Restrict, Vec Rscale, Mat Inject, DM dmcoarse, void *ctx)
639d71ae5a4SJacob Faibussowitsch {
640dfe15315SJed Brown   SNES snes = (SNES)ctx;
6410298fd71SBarry Smith   Vec  Xfine, Xfine_named = NULL, Xcoarse;
642dfe15315SJed Brown 
643dfe15315SJed Brown   PetscFunctionBegin;
64416ebb321SJed Brown   if (PetscLogPrintInfo) {
64516ebb321SJed Brown     PetscInt finelevel, coarselevel, fineclevel, coarseclevel;
6469566063dSJacob Faibussowitsch     PetscCall(DMGetRefineLevel(dmfine, &finelevel));
6479566063dSJacob Faibussowitsch     PetscCall(DMGetCoarsenLevel(dmfine, &fineclevel));
6489566063dSJacob Faibussowitsch     PetscCall(DMGetRefineLevel(dmcoarse, &coarselevel));
6499566063dSJacob Faibussowitsch     PetscCall(DMGetCoarsenLevel(dmcoarse, &coarseclevel));
65063a3b9bcSJacob Faibussowitsch     PetscCall(PetscInfo(dmfine, "Restricting SNES solution vector from level %" PetscInt_FMT "-%" PetscInt_FMT " to level %" PetscInt_FMT "-%" PetscInt_FMT "\n", finelevel, fineclevel, coarselevel, coarseclevel));
65116ebb321SJed Brown   }
652dfe15315SJed Brown   if (dmfine == snes->dm) Xfine = snes->vec_sol;
653dfe15315SJed Brown   else {
6549566063dSJacob Faibussowitsch     PetscCall(DMGetNamedGlobalVector(dmfine, "SNESVecSol", &Xfine_named));
655dfe15315SJed Brown     Xfine = Xfine_named;
656dfe15315SJed Brown   }
6579566063dSJacob Faibussowitsch   PetscCall(DMGetNamedGlobalVector(dmcoarse, "SNESVecSol", &Xcoarse));
658907f5c5aSLawrence Mitchell   if (Inject) {
6599566063dSJacob Faibussowitsch     PetscCall(MatRestrict(Inject, Xfine, Xcoarse));
660907f5c5aSLawrence Mitchell   } else {
6619566063dSJacob Faibussowitsch     PetscCall(MatRestrict(Restrict, Xfine, Xcoarse));
6629566063dSJacob Faibussowitsch     PetscCall(VecPointwiseMult(Xcoarse, Xcoarse, Rscale));
663907f5c5aSLawrence Mitchell   }
6649566063dSJacob Faibussowitsch   PetscCall(DMRestoreNamedGlobalVector(dmcoarse, "SNESVecSol", &Xcoarse));
6659566063dSJacob Faibussowitsch   if (Xfine_named) PetscCall(DMRestoreNamedGlobalVector(dmfine, "SNESVecSol", &Xfine_named));
6663ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
667dfe15315SJed Brown }
668dfe15315SJed Brown 
669d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMCoarsenHook_SNESVecSol(DM dm, DM dmc, void *ctx)
670d71ae5a4SJacob Faibussowitsch {
67116ebb321SJed Brown   PetscFunctionBegin;
6729566063dSJacob Faibussowitsch   PetscCall(DMCoarsenHookAdd(dmc, DMCoarsenHook_SNESVecSol, DMRestrictHook_SNESVecSol, ctx));
6733ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
67416ebb321SJed Brown }
67516ebb321SJed Brown 
676a6950cb2SJed Brown /* This may be called to rediscretize the operator on levels of linear multigrid. The DM shuffle is so the user can
677a6950cb2SJed Brown  * safely call SNESGetDM() in their residual evaluation routine. */
678d71ae5a4SJacob Faibussowitsch static PetscErrorCode KSPComputeOperators_SNES(KSP ksp, Mat A, Mat B, void *ctx)
679d71ae5a4SJacob Faibussowitsch {
680caa4e7f2SJed Brown   SNES  snes = (SNES)ctx;
6810298fd71SBarry Smith   Vec   X, Xnamed = NULL;
682dfe15315SJed Brown   DM    dmsave;
6834e269d77SPeter Brune   void *ctxsave;
68425ce1634SJed Brown   PetscErrorCode (*jac)(SNES, Vec, Mat, Mat, void *) = NULL;
685caa4e7f2SJed Brown 
686caa4e7f2SJed Brown   PetscFunctionBegin;
687dfe15315SJed Brown   dmsave = snes->dm;
6889566063dSJacob Faibussowitsch   PetscCall(KSPGetDM(ksp, &snes->dm));
689dfe15315SJed Brown   if (dmsave == snes->dm) X = snes->vec_sol; /* We are on the finest level */
6909371c9d4SSatish Balay   else { /* We are on a coarser level, this vec was initialized using a DM restrict hook */ PetscCall(DMGetNamedGlobalVector(snes->dm, "SNESVecSol", &Xnamed));
691dfe15315SJed Brown     X = Xnamed;
6929566063dSJacob Faibussowitsch     PetscCall(SNESGetJacobian(snes, NULL, NULL, &jac, &ctxsave));
6934e269d77SPeter Brune     /* If the DM's don't match up, the MatFDColoring context needed for the jacobian won't match up either -- fixit. */
69448a46eb9SPierre Jolivet     if (jac == SNESComputeJacobianDefaultColor) PetscCall(SNESSetJacobian(snes, NULL, NULL, SNESComputeJacobianDefaultColor, NULL));
6954e269d77SPeter Brune   }
6964dde8bb0SMatthew G. Knepley   /* Make sure KSP DM has the Jacobian computation routine */
6974dde8bb0SMatthew G. Knepley   {
6984dde8bb0SMatthew G. Knepley     DMSNES sdm;
6994e269d77SPeter Brune 
7009566063dSJacob Faibussowitsch     PetscCall(DMGetDMSNES(snes->dm, &sdm));
70148a46eb9SPierre Jolivet     if (!sdm->ops->computejacobian) PetscCall(DMCopyDMSNES(dmsave, snes->dm));
7024dde8bb0SMatthew G. Knepley   }
7032b93b426SMatthew G. Knepley   /* Compute the operators */
7049566063dSJacob Faibussowitsch   PetscCall(SNESComputeJacobian(snes, X, A, B));
7052b93b426SMatthew G. Knepley   /* Put the previous context back */
70648a46eb9SPierre Jolivet   if (snes->dm != dmsave && jac == SNESComputeJacobianDefaultColor) PetscCall(SNESSetJacobian(snes, NULL, NULL, jac, ctxsave));
7074e269d77SPeter Brune 
7089566063dSJacob Faibussowitsch   if (Xnamed) PetscCall(DMRestoreNamedGlobalVector(snes->dm, "SNESVecSol", &Xnamed));
709dfe15315SJed Brown   snes->dm = dmsave;
7103ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
711caa4e7f2SJed Brown }
712caa4e7f2SJed Brown 
7136cab3a1bSJed Brown /*@
714dc4c0fb0SBarry Smith   SNESSetUpMatrices - ensures that matrices are available for `SNES` Newton-like methods, this is called by `SNESSetUp_XXX()`
7156cab3a1bSJed Brown 
7166cab3a1bSJed Brown   Collective
7176cab3a1bSJed Brown 
7184165533cSJose E. Roman   Input Parameter:
71920f4b53cSBarry Smith . snes - `SNES` object to configure
7206cab3a1bSJed Brown 
7216cab3a1bSJed Brown   Level: developer
7226cab3a1bSJed Brown 
723dc4c0fb0SBarry Smith   Note:
724dc4c0fb0SBarry Smith   If the matrices do not yet exist it attempts to create them based on options previously set for the `SNES` such as `-snes_mf`
725dc4c0fb0SBarry Smith 
7261cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetUp()`
7276cab3a1bSJed Brown @*/
728d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetUpMatrices(SNES snes)
729d71ae5a4SJacob Faibussowitsch {
7306cab3a1bSJed Brown   DM     dm;
731942e3340SBarry Smith   DMSNES sdm;
7326cab3a1bSJed Brown 
7336cab3a1bSJed Brown   PetscFunctionBegin;
7349566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
7359566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &sdm));
73658b371f3SBarry Smith   if (!snes->jacobian && snes->mf) {
7376cab3a1bSJed Brown     Mat   J;
7386cab3a1bSJed Brown     void *functx;
7399566063dSJacob Faibussowitsch     PetscCall(MatCreateSNESMF(snes, &J));
7409566063dSJacob Faibussowitsch     PetscCall(MatMFFDSetOptionsPrefix(J, ((PetscObject)snes)->prefix));
7419566063dSJacob Faibussowitsch     PetscCall(MatSetFromOptions(J));
7429566063dSJacob Faibussowitsch     PetscCall(SNESGetFunction(snes, NULL, NULL, &functx));
7439566063dSJacob Faibussowitsch     PetscCall(SNESSetJacobian(snes, J, J, NULL, NULL));
7449566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&J));
745caa4e7f2SJed Brown   } else if (snes->mf_operator && !snes->jacobian_pre && !snes->jacobian) {
7466cab3a1bSJed Brown     Mat J, B;
7479566063dSJacob Faibussowitsch     PetscCall(MatCreateSNESMF(snes, &J));
7489566063dSJacob Faibussowitsch     PetscCall(MatMFFDSetOptionsPrefix(J, ((PetscObject)snes)->prefix));
7499566063dSJacob Faibussowitsch     PetscCall(MatSetFromOptions(J));
7509566063dSJacob Faibussowitsch     PetscCall(DMCreateMatrix(snes->dm, &B));
75106f20277SJed Brown     /* sdm->computejacobian was already set to reach here */
7529566063dSJacob Faibussowitsch     PetscCall(SNESSetJacobian(snes, J, B, NULL, NULL));
7539566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&J));
7549566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&B));
755caa4e7f2SJed Brown   } else if (!snes->jacobian_pre) {
7561ba9b98eSMatthew G. Knepley     PetscDS   prob;
7576cab3a1bSJed Brown     Mat       J, B;
7581ba9b98eSMatthew G. Knepley     PetscBool hasPrec = PETSC_FALSE;
7591ba9b98eSMatthew G. Knepley 
7606cab3a1bSJed Brown     J = snes->jacobian;
7619566063dSJacob Faibussowitsch     PetscCall(DMGetDS(dm, &prob));
7629566063dSJacob Faibussowitsch     if (prob) PetscCall(PetscDSHasJacobianPreconditioner(prob, &hasPrec));
7639566063dSJacob Faibussowitsch     if (J) PetscCall(PetscObjectReference((PetscObject)J));
7649566063dSJacob Faibussowitsch     else if (hasPrec) PetscCall(DMCreateMatrix(snes->dm, &J));
7659566063dSJacob Faibussowitsch     PetscCall(DMCreateMatrix(snes->dm, &B));
7669566063dSJacob Faibussowitsch     PetscCall(SNESSetJacobian(snes, J ? J : B, B, NULL, NULL));
7679566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&J));
7689566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&B));
7696cab3a1bSJed Brown   }
770caa4e7f2SJed Brown   {
771caa4e7f2SJed Brown     KSP ksp;
7729566063dSJacob Faibussowitsch     PetscCall(SNESGetKSP(snes, &ksp));
7739566063dSJacob Faibussowitsch     PetscCall(KSPSetComputeOperators(ksp, KSPComputeOperators_SNES, snes));
7749566063dSJacob Faibussowitsch     PetscCall(DMCoarsenHookAdd(snes->dm, DMCoarsenHook_SNESVecSol, DMRestrictHook_SNESVecSol, snes));
775caa4e7f2SJed Brown   }
7763ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
7776cab3a1bSJed Brown }
7786cab3a1bSJed Brown 
779d71ae5a4SJacob Faibussowitsch static PetscErrorCode SNESMonitorPauseFinal_Internal(SNES snes)
780d71ae5a4SJacob Faibussowitsch {
7815e7c47f3SMatthew G. Knepley   PetscInt i;
7825e7c47f3SMatthew G. Knepley 
7835e7c47f3SMatthew G. Knepley   PetscFunctionBegin;
7843ba16761SJacob Faibussowitsch   if (!snes->pauseFinal) PetscFunctionReturn(PETSC_SUCCESS);
7855e7c47f3SMatthew G. Knepley   for (i = 0; i < snes->numbermonitors; ++i) {
7865e7c47f3SMatthew G. Knepley     PetscViewerAndFormat *vf = (PetscViewerAndFormat *)snes->monitorcontext[i];
7875e7c47f3SMatthew G. Knepley     PetscDraw             draw;
7885e7c47f3SMatthew G. Knepley     PetscReal             lpause;
7895e7c47f3SMatthew G. Knepley 
7905e7c47f3SMatthew G. Knepley     if (!vf) continue;
7915e7c47f3SMatthew G. Knepley     if (vf->lg) {
7925e7c47f3SMatthew G. Knepley       if (!PetscCheckPointer(vf->lg, PETSC_OBJECT)) continue;
7935e7c47f3SMatthew G. Knepley       if (((PetscObject)vf->lg)->classid != PETSC_DRAWLG_CLASSID) continue;
7949566063dSJacob Faibussowitsch       PetscCall(PetscDrawLGGetDraw(vf->lg, &draw));
7959566063dSJacob Faibussowitsch       PetscCall(PetscDrawGetPause(draw, &lpause));
7969566063dSJacob Faibussowitsch       PetscCall(PetscDrawSetPause(draw, -1.0));
7979566063dSJacob Faibussowitsch       PetscCall(PetscDrawPause(draw));
7989566063dSJacob Faibussowitsch       PetscCall(PetscDrawSetPause(draw, lpause));
7995e7c47f3SMatthew G. Knepley     } else {
8005e7c47f3SMatthew G. Knepley       PetscBool isdraw;
8015e7c47f3SMatthew G. Knepley 
8025e7c47f3SMatthew G. Knepley       if (!PetscCheckPointer(vf->viewer, PETSC_OBJECT)) continue;
8035e7c47f3SMatthew G. Knepley       if (((PetscObject)vf->viewer)->classid != PETSC_VIEWER_CLASSID) continue;
8049566063dSJacob Faibussowitsch       PetscCall(PetscObjectTypeCompare((PetscObject)vf->viewer, PETSCVIEWERDRAW, &isdraw));
8055e7c47f3SMatthew G. Knepley       if (!isdraw) continue;
8069566063dSJacob Faibussowitsch       PetscCall(PetscViewerDrawGetDraw(vf->viewer, 0, &draw));
8079566063dSJacob Faibussowitsch       PetscCall(PetscDrawGetPause(draw, &lpause));
8089566063dSJacob Faibussowitsch       PetscCall(PetscDrawSetPause(draw, -1.0));
8099566063dSJacob Faibussowitsch       PetscCall(PetscDrawPause(draw));
8109566063dSJacob Faibussowitsch       PetscCall(PetscDrawSetPause(draw, lpause));
8115e7c47f3SMatthew G. Knepley     }
8125e7c47f3SMatthew G. Knepley   }
8133ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
8145e7c47f3SMatthew G. Knepley }
8155e7c47f3SMatthew G. Knepley 
816fde5950dSBarry Smith /*@C
817fde5950dSBarry Smith   SNESMonitorSetFromOptions - Sets a monitor function and viewer appropriate for the type indicated by the user
818fde5950dSBarry Smith 
819c3339decSBarry Smith   Collective
820fde5950dSBarry Smith 
821fde5950dSBarry Smith   Input Parameters:
822dc4c0fb0SBarry Smith + snes         - `SNES` object you wish to monitor
823fde5950dSBarry Smith . name         - the monitor type one is seeking
824fde5950dSBarry Smith . help         - message indicating what monitoring is done
825fde5950dSBarry Smith . manual       - manual page for the monitor
826fde5950dSBarry Smith . monitor      - the monitor function
827f6dfbefdSBarry Smith - monitorsetup - a function that is called once ONLY if the user selected this monitor that may set additional features of the `SNES` or `PetscViewer` objects
828fde5950dSBarry Smith 
829f6dfbefdSBarry Smith   Options Database Key:
830f6dfbefdSBarry Smith . -name - trigger the use of this monitor in `SNESSetFromOptions()`
831f6dfbefdSBarry Smith 
832f6dfbefdSBarry Smith   Level: advanced
833fde5950dSBarry Smith 
8341cc06b55SBarry Smith .seealso: [](ch_snes), `PetscOptionsGetViewer()`, `PetscOptionsGetReal()`, `PetscOptionsHasName()`, `PetscOptionsGetString()`,
835db781477SPatrick Sanan           `PetscOptionsGetIntArray()`, `PetscOptionsGetRealArray()`, `PetscOptionsBool()`
836*e4094ef1SJacob Faibussowitsch           `PetscOptionsInt()`, `PetscOptionsString()`, `PetscOptionsReal()`,
837db781477SPatrick Sanan           `PetscOptionsName()`, `PetscOptionsBegin()`, `PetscOptionsEnd()`, `PetscOptionsHeadBegin()`,
838c2e3fba1SPatrick Sanan           `PetscOptionsStringArray()`, `PetscOptionsRealArray()`, `PetscOptionsScalar()`,
839db781477SPatrick Sanan           `PetscOptionsBoolGroupBegin()`, `PetscOptionsBoolGroup()`, `PetscOptionsBoolGroupEnd()`,
840db781477SPatrick Sanan           `PetscOptionsFList()`, `PetscOptionsEList()`
841fde5950dSBarry Smith @*/
842d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESMonitorSetFromOptions(SNES snes, const char name[], const char help[], const char manual[], PetscErrorCode (*monitor)(SNES, PetscInt, PetscReal, PetscViewerAndFormat *), PetscErrorCode (*monitorsetup)(SNES, PetscViewerAndFormat *))
843d71ae5a4SJacob Faibussowitsch {
844fde5950dSBarry Smith   PetscViewer       viewer;
845fde5950dSBarry Smith   PetscViewerFormat format;
846fde5950dSBarry Smith   PetscBool         flg;
847fde5950dSBarry Smith 
848fde5950dSBarry Smith   PetscFunctionBegin;
8499566063dSJacob Faibussowitsch   PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, name, &viewer, &format, &flg));
850fde5950dSBarry Smith   if (flg) {
851d43b4f6eSBarry Smith     PetscViewerAndFormat *vf;
8529566063dSJacob Faibussowitsch     PetscCall(PetscViewerAndFormatCreate(viewer, format, &vf));
8539566063dSJacob Faibussowitsch     PetscCall(PetscObjectDereference((PetscObject)viewer));
8541baa6e33SBarry Smith     if (monitorsetup) PetscCall((*monitorsetup)(snes, vf));
8559566063dSJacob Faibussowitsch     PetscCall(SNESMonitorSet(snes, (PetscErrorCode(*)(SNES, PetscInt, PetscReal, void *))monitor, vf, (PetscErrorCode(*)(void **))PetscViewerAndFormatDestroy));
856fde5950dSBarry Smith   }
8573ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
858fde5950dSBarry Smith }
859fde5950dSBarry Smith 
860a4598233SStefano Zampini PetscErrorCode SNESEWSetFromOptions_Private(SNESKSPEW *kctx, PetscBool print_api, MPI_Comm comm, const char *prefix)
861d71ae5a4SJacob Faibussowitsch {
862a4598233SStefano Zampini   const char *api = print_api ? "SNESKSPSetParametersEW" : NULL;
863a4598233SStefano Zampini 
8640f0abf79SStefano Zampini   PetscFunctionBegin;
8650f0abf79SStefano Zampini   PetscOptionsBegin(comm, prefix, "Eisenstat and Walker type forcing options", "KSP");
866a4598233SStefano Zampini   PetscCall(PetscOptionsInt("-ksp_ew_version", "Version 1, 2 or 3", api, kctx->version, &kctx->version, NULL));
867a4598233SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_rtol0", "0 <= rtol0 < 1", api, kctx->rtol_0, &kctx->rtol_0, NULL));
868a4598233SStefano Zampini   kctx->rtol_max = PetscMax(kctx->rtol_0, kctx->rtol_max);
869a4598233SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_rtolmax", "0 <= rtolmax < 1", api, kctx->rtol_max, &kctx->rtol_max, NULL));
870a4598233SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_gamma", "0 <= gamma <= 1", api, kctx->gamma, &kctx->gamma, NULL));
871a4598233SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_alpha", "1 < alpha <= 2", api, kctx->alpha, &kctx->alpha, NULL));
8720f0abf79SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_alpha2", "alpha2", NULL, kctx->alpha2, &kctx->alpha2, NULL));
873a4598233SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_threshold", "0 < threshold < 1", api, kctx->threshold, &kctx->threshold, NULL));
8740f0abf79SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_v4_p1", "p1", NULL, kctx->v4_p1, &kctx->v4_p1, NULL));
8750f0abf79SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_v4_p2", "p2", NULL, kctx->v4_p2, &kctx->v4_p2, NULL));
8760f0abf79SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_v4_p3", "p3", NULL, kctx->v4_p3, &kctx->v4_p3, NULL));
8770f0abf79SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_v4_m1", "Scaling when rk-1 in [p2,p3)", NULL, kctx->v4_m1, &kctx->v4_m1, NULL));
8780f0abf79SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_v4_m2", "Scaling when rk-1 in [p3,+infty)", NULL, kctx->v4_m2, &kctx->v4_m2, NULL));
8790f0abf79SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_v4_m3", "Threshold for successive rtol (0.1 in Eq.7)", NULL, kctx->v4_m3, &kctx->v4_m3, NULL));
8800f0abf79SStefano Zampini   PetscCall(PetscOptionsReal("-ksp_ew_v4_m4", "Adaptation scaling (0.5 in Eq.7)", NULL, kctx->v4_m4, &kctx->v4_m4, NULL));
8810f0abf79SStefano Zampini   PetscOptionsEnd();
8823ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
8830f0abf79SStefano Zampini }
8840f0abf79SStefano Zampini 
8859b94acceSBarry Smith /*@
886f6dfbefdSBarry Smith   SNESSetFromOptions - Sets various `SNES` and `KSP` parameters from user options.
8879b94acceSBarry Smith 
888c3339decSBarry Smith   Collective
889c7afd0dbSLois Curfman McInnes 
8909b94acceSBarry Smith   Input Parameter:
891f6dfbefdSBarry Smith . snes - the `SNES` context
8929b94acceSBarry Smith 
89336851e7fSLois Curfman McInnes   Options Database Keys:
894f6dfbefdSBarry Smith + -snes_type <type>                                                            - newtonls, newtontr, ngmres, ncg, nrichardson, qn, vi, fas, `SNESType` for complete list
89582738288SBarry Smith . -snes_stol                                                                   - convergence tolerance in terms of the norm
89682738288SBarry Smith                 of the change in the solution between steps
89770441072SBarry Smith . -snes_atol <abstol>                                                          - absolute tolerance of residual norm
898b39c3a46SLois Curfman McInnes . -snes_rtol <rtol>                                                            - relative decrease in tolerance norm from initial
899e4d06f11SPatrick Farrell . -snes_divergence_tolerance <divtol>                                          - if the residual goes above divtol*rnorm0, exit with divergence
900be5caee7SBarry Smith . -snes_force_iteration <force>                                                - force SNESSolve() to take at least one iteration
901b39c3a46SLois Curfman McInnes . -snes_max_it <max_it>                                                        - maximum number of iterations
902b39c3a46SLois Curfman McInnes . -snes_max_funcs <max_funcs>                                                  - maximum number of function evaluations
9034839bfe8SBarry Smith . -snes_max_fail <max_fail>                                                    - maximum number of line search failures allowed before stopping, default is none
904ddf469c8SBarry Smith . -snes_max_linear_solve_fail                                                  - number of linear solver failures before SNESSolve() stops
905a8054027SBarry Smith . -snes_lag_preconditioner <lag>                                               - how often preconditioner is rebuilt (use -1 to never rebuild)
9063d5a8a6aSBarry Smith . -snes_lag_preconditioner_persists <true,false>                               - retains the -snes_lag_preconditioner information across multiple SNESSolve()
907e35cf81dSBarry Smith . -snes_lag_jacobian <lag>                                                     - how often Jacobian is rebuilt (use -1 to never rebuild)
9083d5a8a6aSBarry Smith . -snes_lag_jacobian_persists <true,false>                                     - retains the -snes_lag_jacobian information across multiple SNESSolve()
9094a221d59SStefano Zampini . -snes_tr_tol <trtol>                                                         - trust region tolerance
910f362779dSJed Brown . -snes_convergence_test                                                       - <default,skip,correct_pressure> convergence test in nonlinear solver.
911f6dfbefdSBarry Smith                                default `SNESConvergedDefault()`. skip `SNESConvergedSkip()` means continue iterating until max_it or some other criterion is reached, saving expense
912f6dfbefdSBarry Smith                                of convergence test. correct_pressure S`NESConvergedCorrectPressure()` has special handling of a pressure null space.
913fde5950dSBarry Smith . -snes_monitor [ascii][:filename][:viewer format]                             - prints residual norm at each iteration. if no filename given prints to stdout
914fde5950dSBarry Smith . -snes_monitor_solution [ascii binary draw][:filename][:viewer format]        - plots solution at each iteration
915fde5950dSBarry Smith . -snes_monitor_residual [ascii binary draw][:filename][:viewer format]        - plots residual (not its norm) at each iteration
916fde5950dSBarry Smith . -snes_monitor_solution_update [ascii binary draw][:filename][:viewer format] - plots update to solution at each iteration
9174619e776SBarry Smith . -snes_monitor_lg_residualnorm                                                - plots residual norm at each iteration
918459f5d12SBarry Smith . -snes_monitor_lg_range                                                       - plots residual norm at each iteration
9195e7c47f3SMatthew G. Knepley . -snes_monitor_pause_final                                                    - Pauses all monitor drawing after the solver ends
920e24b481bSBarry Smith . -snes_fd                                                                     - use finite differences to compute Jacobian; very slow, only for testing
921e2e60de9SPeter Brune . -snes_fd_color                                                               - use finite differences with coloring to compute Jacobian
9225968eb51SBarry Smith . -snes_mf_ksp_monitor                                                         - if using matrix-free multiply then print h at each KSP iteration
923b5badacbSBarry Smith . -snes_converged_reason                                                       - print the reason for convergence/divergence after each solve
924e62ac41dSBarry Smith . -npc_snes_type <type>                                                        - the SNES type to use as a nonlinear preconditioner
925e62ac41dSBarry Smith . -snes_test_jacobian <optional threshold>                                     - compare the user provided Jacobian with one computed via finite differences to check for errors.  If a threshold is given, display only those entries whose difference is greater than the threshold.
926e62ac41dSBarry Smith - -snes_test_jacobian_view                                                     - display the user provided Jacobian, the finite difference Jacobian and the difference between them to help users detect the location of errors in the user provided Jacobian.
92782738288SBarry Smith 
928f6dfbefdSBarry Smith   Options Database Keys for Eisenstat-Walker method:
929fa9f3622SBarry Smith + -snes_ksp_ew                       - use Eisenstat-Walker method for determining linear system convergence
9304b27c08aSLois Curfman McInnes . -snes_ksp_ew_version ver           - version of  Eisenstat-Walker method
93136851e7fSLois Curfman McInnes . -snes_ksp_ew_rtol0 <rtol0>         - Sets rtol0
93236851e7fSLois Curfman McInnes . -snes_ksp_ew_rtolmax <rtolmax>     - Sets rtolmax
93336851e7fSLois Curfman McInnes . -snes_ksp_ew_gamma <gamma>         - Sets gamma
93436851e7fSLois Curfman McInnes . -snes_ksp_ew_alpha <alpha>         - Sets alpha
93536851e7fSLois Curfman McInnes . -snes_ksp_ew_alpha2 <alpha2>       - Sets alpha2
93636851e7fSLois Curfman McInnes - -snes_ksp_ew_threshold <threshold> - Sets threshold
93782738288SBarry Smith 
938dc4c0fb0SBarry Smith   Level: beginner
939dc4c0fb0SBarry Smith 
94011ca99fdSLois Curfman McInnes   Notes:
941ec5066bdSBarry Smith   To see all options, run your program with the -help option or consult the users manual
942ec5066bdSBarry Smith 
943f6dfbefdSBarry Smith   `SNES` supports three approaches for computing (approximate) Jacobians: user provided via `SNESSetJacobian()`, matrix free, and computing explicitly with
944f6dfbefdSBarry Smith   finite differences and coloring using `MatFDColoring`. It is also possible to use automatic differentiation and the `MatFDColoring` object.
94583e2fdc7SBarry Smith 
9461cc06b55SBarry Smith .seealso: [](ch_snes), `SNESType`, `SNESSetOptionsPrefix()`, `SNESResetFromOptions()`, `SNES`, `SNESCreate()`
9479b94acceSBarry Smith @*/
948d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetFromOptions(SNES snes)
949d71ae5a4SJacob Faibussowitsch {
9508afaa268SBarry Smith   PetscBool   flg, pcset, persist, set;
951d8f46077SPeter Brune   PetscInt    i, indx, lag, grids;
95204d7464bSBarry Smith   const char *deft        = SNESNEWTONLS;
953649ef022SMatthew Knepley   const char *convtests[] = {"default", "skip", "correct_pressure"};
95485385478SLisandro Dalcin   SNESKSPEW  *kctx        = NULL;
9550f0abf79SStefano Zampini   char        type[256], monfilename[PETSC_MAX_PATH_LEN], ewprefix[256];
956c40d0f55SPeter Brune   PCSide      pcside;
957a64e098fSPeter Brune   const char *optionsprefix;
9589b94acceSBarry Smith 
9593a40ed3dSBarry Smith   PetscFunctionBegin;
9600700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
9619566063dSJacob Faibussowitsch   PetscCall(SNESRegisterAll());
962d0609cedSBarry Smith   PetscObjectOptionsBegin((PetscObject)snes);
963639ff905SBarry Smith   if (((PetscObject)snes)->type_name) deft = ((PetscObject)snes)->type_name;
9649566063dSJacob Faibussowitsch   PetscCall(PetscOptionsFList("-snes_type", "Nonlinear solver method", "SNESSetType", SNESList, deft, type, 256, &flg));
965d64ed03dSBarry Smith   if (flg) {
9669566063dSJacob Faibussowitsch     PetscCall(SNESSetType(snes, type));
9677adad957SLisandro Dalcin   } else if (!((PetscObject)snes)->type_name) {
9689566063dSJacob Faibussowitsch     PetscCall(SNESSetType(snes, deft));
969d64ed03dSBarry Smith   }
9709566063dSJacob Faibussowitsch   PetscCall(PetscOptionsReal("-snes_stol", "Stop if step length less than", "SNESSetTolerances", snes->stol, &snes->stol, NULL));
9719566063dSJacob Faibussowitsch   PetscCall(PetscOptionsReal("-snes_atol", "Stop if function norm less than", "SNESSetTolerances", snes->abstol, &snes->abstol, NULL));
972186905e3SBarry Smith 
9739566063dSJacob Faibussowitsch   PetscCall(PetscOptionsReal("-snes_rtol", "Stop if decrease in function norm less than", "SNESSetTolerances", snes->rtol, &snes->rtol, NULL));
9749566063dSJacob Faibussowitsch   PetscCall(PetscOptionsReal("-snes_divergence_tolerance", "Stop if residual norm increases by this factor", "SNESSetDivergenceTolerance", snes->divtol, &snes->divtol, NULL));
9759566063dSJacob Faibussowitsch   PetscCall(PetscOptionsInt("-snes_max_it", "Maximum iterations", "SNESSetTolerances", snes->max_its, &snes->max_its, NULL));
9769566063dSJacob Faibussowitsch   PetscCall(PetscOptionsInt("-snes_max_funcs", "Maximum function evaluations", "SNESSetTolerances", snes->max_funcs, &snes->max_funcs, NULL));
9779566063dSJacob Faibussowitsch   PetscCall(PetscOptionsInt("-snes_max_fail", "Maximum nonlinear step failures", "SNESSetMaxNonlinearStepFailures", snes->maxFailures, &snes->maxFailures, NULL));
9789566063dSJacob Faibussowitsch   PetscCall(PetscOptionsInt("-snes_max_linear_solve_fail", "Maximum failures in linear solves allowed", "SNESSetMaxLinearSolveFailures", snes->maxLinearSolveFailures, &snes->maxLinearSolveFailures, NULL));
9799566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_error_if_not_converged", "Generate error if solver does not converge", "SNESSetErrorIfNotConverged", snes->errorifnotconverged, &snes->errorifnotconverged, NULL));
9809566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_force_iteration", "Force SNESSolve() to take at least one iteration", "SNESSetForceIteration", snes->forceiteration, &snes->forceiteration, NULL));
9819566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_check_jacobian_domain_error", "Check Jacobian domain error after Jacobian evaluation", "SNESCheckJacobianDomainError", snes->checkjacdomainerror, &snes->checkjacdomainerror, NULL));
98285385478SLisandro Dalcin 
9839566063dSJacob Faibussowitsch   PetscCall(PetscOptionsInt("-snes_lag_preconditioner", "How often to rebuild preconditioner", "SNESSetLagPreconditioner", snes->lagpreconditioner, &lag, &flg));
984a8054027SBarry Smith   if (flg) {
9855f80ce2aSJacob Faibussowitsch     PetscCheck(lag != -1, PetscObjectComm((PetscObject)snes), PETSC_ERR_USER, "Cannot set the lag to -1 from the command line since the preconditioner must be built as least once, perhaps you mean -2");
9869566063dSJacob Faibussowitsch     PetscCall(SNESSetLagPreconditioner(snes, lag));
987a8054027SBarry Smith   }
9889566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_lag_preconditioner_persists", "Preconditioner lagging through multiple SNES solves", "SNESSetLagPreconditionerPersists", snes->lagjac_persist, &persist, &flg));
9891baa6e33SBarry Smith   if (flg) PetscCall(SNESSetLagPreconditionerPersists(snes, persist));
9909566063dSJacob Faibussowitsch   PetscCall(PetscOptionsInt("-snes_lag_jacobian", "How often to rebuild Jacobian", "SNESSetLagJacobian", snes->lagjacobian, &lag, &flg));
991e35cf81dSBarry Smith   if (flg) {
9925f80ce2aSJacob Faibussowitsch     PetscCheck(lag != -1, PetscObjectComm((PetscObject)snes), PETSC_ERR_USER, "Cannot set the lag to -1 from the command line since the Jacobian must be built as least once, perhaps you mean -2");
9939566063dSJacob Faibussowitsch     PetscCall(SNESSetLagJacobian(snes, lag));
994e35cf81dSBarry Smith   }
9959566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_lag_jacobian_persists", "Jacobian lagging through multiple SNES solves", "SNESSetLagJacobianPersists", snes->lagjac_persist, &persist, &flg));
9961baa6e33SBarry Smith   if (flg) PetscCall(SNESSetLagJacobianPersists(snes, persist));
99737ec4e1aSPeter Brune 
9989566063dSJacob Faibussowitsch   PetscCall(PetscOptionsInt("-snes_grid_sequence", "Use grid sequencing to generate initial guess", "SNESSetGridSequence", snes->gridsequence, &grids, &flg));
9991baa6e33SBarry Smith   if (flg) PetscCall(SNESSetGridSequence(snes, grids));
1000a8054027SBarry Smith 
10019566063dSJacob Faibussowitsch   PetscCall(PetscOptionsEList("-snes_convergence_test", "Convergence test", "SNESSetConvergenceTest", convtests, sizeof(convtests) / sizeof(char *), "default", &indx, &flg));
100285385478SLisandro Dalcin   if (flg) {
100385385478SLisandro Dalcin     switch (indx) {
1004d71ae5a4SJacob Faibussowitsch     case 0:
1005d71ae5a4SJacob Faibussowitsch       PetscCall(SNESSetConvergenceTest(snes, SNESConvergedDefault, NULL, NULL));
1006d71ae5a4SJacob Faibussowitsch       break;
1007d71ae5a4SJacob Faibussowitsch     case 1:
1008d71ae5a4SJacob Faibussowitsch       PetscCall(SNESSetConvergenceTest(snes, SNESConvergedSkip, NULL, NULL));
1009d71ae5a4SJacob Faibussowitsch       break;
1010d71ae5a4SJacob Faibussowitsch     case 2:
1011d71ae5a4SJacob Faibussowitsch       PetscCall(SNESSetConvergenceTest(snes, SNESConvergedCorrectPressure, NULL, NULL));
1012d71ae5a4SJacob Faibussowitsch       break;
101385385478SLisandro Dalcin     }
101485385478SLisandro Dalcin   }
101585385478SLisandro Dalcin 
10169566063dSJacob Faibussowitsch   PetscCall(PetscOptionsEList("-snes_norm_schedule", "SNES Norm schedule", "SNESSetNormSchedule", SNESNormSchedules, 5, "function", &indx, &flg));
10179566063dSJacob Faibussowitsch   if (flg) PetscCall(SNESSetNormSchedule(snes, (SNESNormSchedule)indx));
1018fdacfa88SPeter Brune 
10199566063dSJacob Faibussowitsch   PetscCall(PetscOptionsEList("-snes_function_type", "SNES Norm schedule", "SNESSetFunctionType", SNESFunctionTypes, 2, "unpreconditioned", &indx, &flg));
10209566063dSJacob Faibussowitsch   if (flg) PetscCall(SNESSetFunctionType(snes, (SNESFunctionType)indx));
1021186905e3SBarry Smith 
102285385478SLisandro Dalcin   kctx = (SNESKSPEW *)snes->kspconvctx;
102385385478SLisandro Dalcin 
10249566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_ksp_ew", "Use Eisentat-Walker linear system convergence test", "SNESKSPSetUseEW", snes->ksp_ewconv, &snes->ksp_ewconv, NULL));
1025186905e3SBarry Smith 
10260f0abf79SStefano Zampini   PetscCall(SNESGetOptionsPrefix(snes, &optionsprefix));
10270f0abf79SStefano Zampini   PetscCall(PetscSNPrintf(ewprefix, sizeof(ewprefix), "%s%s", optionsprefix ? optionsprefix : "", "snes_"));
1028a4598233SStefano Zampini   PetscCall(SNESEWSetFromOptions_Private(kctx, PETSC_TRUE, PetscObjectComm((PetscObject)snes), ewprefix));
1029186905e3SBarry Smith 
103090d69ab7SBarry Smith   flg = PETSC_FALSE;
10319566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_monitor_cancel", "Remove all monitors", "SNESMonitorCancel", flg, &flg, &set));
10329566063dSJacob Faibussowitsch   if (set && flg) PetscCall(SNESMonitorCancel(snes));
1033eabae89aSBarry Smith 
10349566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor", "Monitor norm of function", "SNESMonitorDefault", SNESMonitorDefault, SNESMonitorDefaultSetUp));
10359566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_short", "Monitor norm of function with fewer digits", "SNESMonitorDefaultShort", SNESMonitorDefaultShort, NULL));
10369566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_range", "Monitor range of elements of function", "SNESMonitorRange", SNESMonitorRange, NULL));
1037eabae89aSBarry Smith 
10389566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_ratio", "Monitor ratios of the norm of function for consecutive steps", "SNESMonitorRatio", SNESMonitorRatio, SNESMonitorRatioSetUp));
10399566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_field", "Monitor norm of function (split into fields)", "SNESMonitorDefaultField", SNESMonitorDefaultField, NULL));
10409566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_solution", "View solution at each iteration", "SNESMonitorSolution", SNESMonitorSolution, NULL));
10419566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_solution_update", "View correction at each iteration", "SNESMonitorSolutionUpdate", SNESMonitorSolutionUpdate, NULL));
10429566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_residual", "View residual at each iteration", "SNESMonitorResidual", SNESMonitorResidual, NULL));
10439566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_jacupdate_spectrum", "Print the change in the spectrum of the Jacobian", "SNESMonitorJacUpdateSpectrum", SNESMonitorJacUpdateSpectrum, NULL));
10449566063dSJacob Faibussowitsch   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_fields", "Monitor norm of function per field", "SNESMonitorSet", SNESMonitorFields, NULL));
10459566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_monitor_pause_final", "Pauses all draw monitors at the final iterate", "SNESMonitorPauseFinal_Internal", PETSC_FALSE, &snes->pauseFinal, NULL));
10462db13446SMatthew G. Knepley 
10479566063dSJacob Faibussowitsch   PetscCall(PetscOptionsString("-snes_monitor_python", "Use Python function", "SNESMonitorSet", NULL, monfilename, sizeof(monfilename), &flg));
10489566063dSJacob Faibussowitsch   if (flg) PetscCall(PetscPythonMonitorSet((PetscObject)snes, monfilename));
10495180491cSLisandro Dalcin 
105090d69ab7SBarry Smith   flg = PETSC_FALSE;
10519566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_monitor_lg_range", "Plot function range at each iteration", "SNESMonitorLGRange", flg, &flg, NULL));
1052459f5d12SBarry Smith   if (flg) {
1053459f5d12SBarry Smith     PetscViewer ctx;
1054e24b481bSBarry Smith 
10559566063dSJacob Faibussowitsch     PetscCall(PetscViewerDrawOpen(PetscObjectComm((PetscObject)snes), NULL, NULL, PETSC_DECIDE, PETSC_DECIDE, 400, 300, &ctx));
10569566063dSJacob Faibussowitsch     PetscCall(SNESMonitorSet(snes, SNESMonitorLGRange, ctx, (PetscErrorCode(*)(void **))PetscViewerDestroy));
1057459f5d12SBarry Smith   }
10582e7541e6SPeter Brune 
105990d69ab7SBarry Smith   flg = PETSC_FALSE;
10609566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_converged_reason_view_cancel", "Remove all converged reason viewers", "SNESConvergedReasonViewCancel", flg, &flg, &set));
10619566063dSJacob Faibussowitsch   if (set && flg) PetscCall(SNESConvergedReasonViewCancel(snes));
1062c4421ceaSFande Kong 
1063c4421ceaSFande Kong   flg = PETSC_FALSE;
10649566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_fd", "Use finite differences (slow) to compute Jacobian", "SNESComputeJacobianDefault", flg, &flg, NULL));
10654b27c08aSLois Curfman McInnes   if (flg) {
10666cab3a1bSJed Brown     void *functx;
1067b1f624c7SBarry Smith     DM    dm;
10689566063dSJacob Faibussowitsch     PetscCall(SNESGetDM(snes, &dm));
1069800f99ffSJeremy L Thompson     PetscCall(DMSNESUnsetJacobianContext_Internal(dm));
10709566063dSJacob Faibussowitsch     PetscCall(SNESGetFunction(snes, NULL, NULL, &functx));
10719566063dSJacob Faibussowitsch     PetscCall(SNESSetJacobian(snes, snes->jacobian, snes->jacobian_pre, SNESComputeJacobianDefault, functx));
10729566063dSJacob Faibussowitsch     PetscCall(PetscInfo(snes, "Setting default finite difference Jacobian matrix\n"));
10739b94acceSBarry Smith   }
1074639f9d9dSBarry Smith 
107544848bc4SPeter Brune   flg = PETSC_FALSE;
10769566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_fd_function", "Use finite differences (slow) to compute function from user objective", "SNESObjectiveComputeFunctionDefaultFD", flg, &flg, NULL));
10771baa6e33SBarry Smith   if (flg) PetscCall(SNESSetFunction(snes, NULL, SNESObjectiveComputeFunctionDefaultFD, NULL));
107897584545SPeter Brune 
107997584545SPeter Brune   flg = PETSC_FALSE;
10809566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_fd_color", "Use finite differences with coloring to compute Jacobian", "SNESComputeJacobianDefaultColor", flg, &flg, NULL));
108144848bc4SPeter Brune   if (flg) {
1082c52e227fSPeter Brune     DM dm;
10839566063dSJacob Faibussowitsch     PetscCall(SNESGetDM(snes, &dm));
1084800f99ffSJeremy L Thompson     PetscCall(DMSNESUnsetJacobianContext_Internal(dm));
10859566063dSJacob Faibussowitsch     PetscCall(SNESSetJacobian(snes, snes->jacobian, snes->jacobian_pre, SNESComputeJacobianDefaultColor, NULL));
10869566063dSJacob Faibussowitsch     PetscCall(PetscInfo(snes, "Setting default finite difference coloring Jacobian matrix\n"));
108744848bc4SPeter Brune   }
108844848bc4SPeter Brune 
1089aa3661deSLisandro Dalcin   flg = PETSC_FALSE;
10909566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_mf_operator", "Use a Matrix-Free Jacobian with user-provided preconditioner matrix", "SNESSetUseMatrixFree", PETSC_FALSE, &snes->mf_operator, &flg));
1091d8f46077SPeter Brune   if (flg && snes->mf_operator) {
1092a8248277SBarry Smith     snes->mf_operator = PETSC_TRUE;
1093d8f46077SPeter Brune     snes->mf          = PETSC_TRUE;
1094a8248277SBarry Smith   }
1095aa3661deSLisandro Dalcin   flg = PETSC_FALSE;
10969566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_mf", "Use a Matrix-Free Jacobian with no preconditioner matrix", "SNESSetUseMatrixFree", PETSC_FALSE, &snes->mf, &flg));
1097d8f46077SPeter Brune   if (!flg && snes->mf_operator) snes->mf = PETSC_TRUE;
10989566063dSJacob Faibussowitsch   PetscCall(PetscOptionsInt("-snes_mf_version", "Matrix-Free routines version 1 or 2", "None", snes->mf_version, &snes->mf_version, NULL));
1099d28543b3SPeter Brune 
1100c40d0f55SPeter Brune   flg = PETSC_FALSE;
11019566063dSJacob Faibussowitsch   PetscCall(SNESGetNPCSide(snes, &pcside));
11029566063dSJacob Faibussowitsch   PetscCall(PetscOptionsEnum("-snes_npc_side", "SNES nonlinear preconditioner side", "SNESSetNPCSide", PCSides, (PetscEnum)pcside, (PetscEnum *)&pcside, &flg));
11039566063dSJacob Faibussowitsch   if (flg) PetscCall(SNESSetNPCSide(snes, pcside));
1104c40d0f55SPeter Brune 
1105e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS)
11068a70d858SHong Zhang   /*
11078a70d858SHong Zhang     Publish convergence information using SAWs
11088a70d858SHong Zhang   */
11098a70d858SHong Zhang   flg = PETSC_FALSE;
11109566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-snes_monitor_saws", "Publish SNES progress using SAWs", "SNESMonitorSet", flg, &flg, NULL));
11118a70d858SHong Zhang   if (flg) {
11128a70d858SHong Zhang     void *ctx;
11139566063dSJacob Faibussowitsch     PetscCall(SNESMonitorSAWsCreate(snes, &ctx));
11149566063dSJacob Faibussowitsch     PetscCall(SNESMonitorSet(snes, SNESMonitorSAWs, ctx, SNESMonitorSAWsDestroy));
11158a70d858SHong Zhang   }
11168a70d858SHong Zhang #endif
11178a70d858SHong Zhang #if defined(PETSC_HAVE_SAWS)
1118b90c6cbeSBarry Smith   {
1119b90c6cbeSBarry Smith     PetscBool set;
1120b90c6cbeSBarry Smith     flg = PETSC_FALSE;
11219566063dSJacob Faibussowitsch     PetscCall(PetscOptionsBool("-snes_saws_block", "Block for SAWs at end of SNESSolve", "PetscObjectSAWsBlock", ((PetscObject)snes)->amspublishblock, &flg, &set));
11221baa6e33SBarry Smith     if (set) PetscCall(PetscObjectSAWsSetBlock((PetscObject)snes, flg));
1123b90c6cbeSBarry Smith   }
1124b90c6cbeSBarry Smith #endif
1125b90c6cbeSBarry Smith 
112648a46eb9SPierre Jolivet   for (i = 0; i < numberofsetfromoptions; i++) PetscCall((*othersetfromoptions[i])(snes));
112776b2cf59SMatthew Knepley 
1128dbbe0bcdSBarry Smith   PetscTryTypeMethod(snes, setfromoptions, PetscOptionsObject);
11295d973c19SBarry Smith 
11305d973c19SBarry Smith   /* process any options handlers added with PetscObjectAddOptionsHandler() */
1131dbbe0bcdSBarry Smith   PetscCall(PetscObjectProcessOptionsHandlers((PetscObject)snes, PetscOptionsObject));
1132d0609cedSBarry Smith   PetscOptionsEnd();
11334bbc92c1SBarry Smith 
1134d8d34be6SBarry Smith   if (snes->linesearch) {
11359566063dSJacob Faibussowitsch     PetscCall(SNESGetLineSearch(snes, &snes->linesearch));
11369566063dSJacob Faibussowitsch     PetscCall(SNESLineSearchSetFromOptions(snes->linesearch));
1137d8d34be6SBarry Smith   }
11389e764e56SPeter Brune 
11396aa5e7e9SBarry Smith   if (snes->usesksp) {
11409566063dSJacob Faibussowitsch     if (!snes->ksp) PetscCall(SNESGetKSP(snes, &snes->ksp));
11419566063dSJacob Faibussowitsch     PetscCall(KSPSetOperators(snes->ksp, snes->jacobian, snes->jacobian_pre));
11429566063dSJacob Faibussowitsch     PetscCall(KSPSetFromOptions(snes->ksp));
11436aa5e7e9SBarry Smith   }
11446991f827SBarry Smith 
1145b5badacbSBarry Smith   /* if user has set the SNES NPC type via options database, create it. */
11469566063dSJacob Faibussowitsch   PetscCall(SNESGetOptionsPrefix(snes, &optionsprefix));
11479566063dSJacob Faibussowitsch   PetscCall(PetscOptionsHasName(((PetscObject)snes)->options, optionsprefix, "-npc_snes_type", &pcset));
114848a46eb9SPierre Jolivet   if (pcset && (!snes->npc)) PetscCall(SNESGetNPC(snes, &snes->npc));
11491baa6e33SBarry Smith   if (snes->npc) PetscCall(SNESSetFromOptions(snes->npc));
1150b3cd9a81SMatthew G. Knepley   snes->setfromoptionscalled++;
11513ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1152b3cd9a81SMatthew G. Knepley }
1153b3cd9a81SMatthew G. Knepley 
1154b3cd9a81SMatthew G. Knepley /*@
1155f6dfbefdSBarry Smith   SNESResetFromOptions - Sets various `SNES` and `KSP` parameters from user options ONLY if the `SNESSetFromOptions()` was previously set from options
1156b3cd9a81SMatthew G. Knepley 
1157c3339decSBarry Smith   Collective
1158b3cd9a81SMatthew G. Knepley 
1159b3cd9a81SMatthew G. Knepley   Input Parameter:
1160f6dfbefdSBarry Smith . snes - the `SNES` context
1161b3cd9a81SMatthew G. Knepley 
1162b3cd9a81SMatthew G. Knepley   Level: beginner
1163b3cd9a81SMatthew G. Knepley 
11641cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetFromOptions()`, `SNESSetOptionsPrefix()`
1165b3cd9a81SMatthew G. Knepley @*/
1166d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESResetFromOptions(SNES snes)
1167d71ae5a4SJacob Faibussowitsch {
1168b3cd9a81SMatthew G. Knepley   PetscFunctionBegin;
11699566063dSJacob Faibussowitsch   if (snes->setfromoptionscalled) PetscCall(SNESSetFromOptions(snes));
11703ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
11719b94acceSBarry Smith }
11729b94acceSBarry Smith 
1173bb9467b5SJed Brown /*@C
1174d25893d9SBarry Smith   SNESSetComputeApplicationContext - Sets an optional function to compute a user-defined context for
1175d25893d9SBarry Smith   the nonlinear solvers.
1176d25893d9SBarry Smith 
1177dc4c0fb0SBarry Smith   Logically Collective; No Fortran Support
1178d25893d9SBarry Smith 
1179d25893d9SBarry Smith   Input Parameters:
1180f6dfbefdSBarry Smith + snes    - the `SNES` context
1181d25893d9SBarry Smith . compute - function to compute the context
1182d25893d9SBarry Smith - destroy - function to destroy the context
1183d25893d9SBarry Smith 
1184d25893d9SBarry Smith   Level: intermediate
1185d25893d9SBarry Smith 
1186f6dfbefdSBarry Smith   Note:
1187f6dfbefdSBarry Smith   This routine is useful if you are performing grid sequencing or using `SNESFAS` and need the appropriate context generated for each level.
1188f6dfbefdSBarry Smith 
1189f6dfbefdSBarry Smith   Use `SNESSetApplicationContext()` to see the context immediately
1190f6dfbefdSBarry Smith 
11911cc06b55SBarry Smith .seealso: [](ch_snes), `SNESGetApplicationContext()`, `SNESSetComputeApplicationContext()`, `SNESSetApplicationContext()`
1192d25893d9SBarry Smith @*/
1193d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetComputeApplicationContext(SNES snes, PetscErrorCode (*compute)(SNES, void **), PetscErrorCode (*destroy)(void **))
1194d71ae5a4SJacob Faibussowitsch {
1195d25893d9SBarry Smith   PetscFunctionBegin;
1196d25893d9SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1197d25893d9SBarry Smith   snes->ops->usercompute = compute;
1198d25893d9SBarry Smith   snes->ops->userdestroy = destroy;
11993ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1200d25893d9SBarry Smith }
1201a847f771SSatish Balay 
1202b07ff414SBarry Smith /*@
1203f6dfbefdSBarry Smith   SNESSetApplicationContext - Sets the optional user-defined context for the nonlinear solvers.
12049b94acceSBarry Smith 
1205c3339decSBarry Smith   Logically Collective
1206fee21e36SBarry Smith 
1207c7afd0dbSLois Curfman McInnes   Input Parameters:
1208f6dfbefdSBarry Smith + snes - the `SNES` context
1209c7afd0dbSLois Curfman McInnes - usrP - optional user context
1210c7afd0dbSLois Curfman McInnes 
121136851e7fSLois Curfman McInnes   Level: intermediate
121236851e7fSLois Curfman McInnes 
1213f6dfbefdSBarry Smith   Notes:
1214f6dfbefdSBarry Smith   Users can provide a context when constructing the `SNES` options and then access it inside their function, Jacobian, or other evaluation function
1215f6dfbefdSBarry Smith   with `SNESGetApplicationContext()`
1216f6dfbefdSBarry Smith 
1217f6dfbefdSBarry Smith   To provide a function that computes the context for you use `SNESSetComputeApplicationContext()`
1218f6dfbefdSBarry Smith 
1219*e4094ef1SJacob Faibussowitsch   Fortran Notes:
1220dc4c0fb0SBarry Smith   You must write a Fortran interface definition for this
1221daf670e6SBarry Smith   function that tells Fortran the Fortran derived data type that you are passing in as the ctx argument.
1222daf670e6SBarry Smith 
12231cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetComputeApplicationContext()`, `SNESGetApplicationContext()`
12249b94acceSBarry Smith @*/
1225d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetApplicationContext(SNES snes, void *usrP)
1226d71ae5a4SJacob Faibussowitsch {
1227b07ff414SBarry Smith   KSP ksp;
12281b2093e4SBarry Smith 
12293a40ed3dSBarry Smith   PetscFunctionBegin;
12300700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
12319566063dSJacob Faibussowitsch   PetscCall(SNESGetKSP(snes, &ksp));
12329566063dSJacob Faibussowitsch   PetscCall(KSPSetApplicationContext(ksp, usrP));
12339b94acceSBarry Smith   snes->user = usrP;
12343ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
12359b94acceSBarry Smith }
123674679c65SBarry Smith 
1237b07ff414SBarry Smith /*@
12389b94acceSBarry Smith   SNESGetApplicationContext - Gets the user-defined context for the
1239f6dfbefdSBarry Smith   nonlinear solvers set with `SNESGetApplicationContext()` or with `SNESSetComputeApplicationContext()`
12409b94acceSBarry Smith 
1241c7afd0dbSLois Curfman McInnes   Not Collective
1242c7afd0dbSLois Curfman McInnes 
12439b94acceSBarry Smith   Input Parameter:
1244f6dfbefdSBarry Smith . snes - `SNES` context
12459b94acceSBarry Smith 
12469b94acceSBarry Smith   Output Parameter:
12479b94acceSBarry Smith . usrP - user context
12489b94acceSBarry Smith 
124936851e7fSLois Curfman McInnes   Level: intermediate
125036851e7fSLois Curfman McInnes 
1251*e4094ef1SJacob Faibussowitsch   Fortran Notes:
1252dc4c0fb0SBarry Smith   You must write a Fortran interface definition for this
1253dc4c0fb0SBarry Smith   function that tells Fortran the Fortran derived data type that you are passing in as the ctx argument.
1254dc4c0fb0SBarry Smith 
12551cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetApplicationContext()`
12569b94acceSBarry Smith @*/
1257d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetApplicationContext(SNES snes, void *usrP)
1258d71ae5a4SJacob Faibussowitsch {
12593a40ed3dSBarry Smith   PetscFunctionBegin;
12600700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1261e71120c6SJed Brown   *(void **)usrP = snes->user;
12623ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
12639b94acceSBarry Smith }
126474679c65SBarry Smith 
12659b94acceSBarry Smith /*@
1266f6dfbefdSBarry Smith   SNESSetUseMatrixFree - indicates that `SNES` should use matrix free finite difference matrix vector products to apply the Jacobian.
12673565c898SBarry Smith 
1268dc4c0fb0SBarry Smith   Logically Collective
12693565c898SBarry Smith 
12703565c898SBarry Smith   Input Parameters:
1271f6dfbefdSBarry Smith + snes        - `SNES` context
1272f6dfbefdSBarry Smith . mf_operator - use matrix-free only for the Amat used by `SNESSetJacobian()`, this means the user provided Pmat will continue to be used
1273f6dfbefdSBarry Smith - mf          - use matrix-free for both the Amat and Pmat used by `SNESSetJacobian()`, both the Amat and Pmat set in `SNESSetJacobian()` will be ignored. With
1274f6dfbefdSBarry Smith    this option no matrix element based preconditioners can be used in the linear solve since the matrix won't be explicitly available
12753565c898SBarry Smith 
1276f6dfbefdSBarry Smith   Options Database Keys:
1277f6dfbefdSBarry Smith + -snes_mf_operator - use matrix free only for the mat operator
1278f6dfbefdSBarry Smith . -snes_mf          - use matrix-free for both the mat and pmat operator
1279ec5066bdSBarry Smith . -snes_fd_color    - compute the Jacobian via coloring and finite differences.
1280ec5066bdSBarry Smith - -snes_fd          - compute the Jacobian via finite differences (slow)
12813565c898SBarry Smith 
12823565c898SBarry Smith   Level: intermediate
12833565c898SBarry Smith 
1284f6dfbefdSBarry Smith   Note:
1285dc4c0fb0SBarry Smith   `SNES` supports three approaches for computing (approximate) Jacobians: user provided via `SNESSetJacobian()`, matrix-free, and computing explicitly with
1286f6dfbefdSBarry Smith   finite differences and coloring using `MatFDColoring`. It is also possible to use automatic differentiation and the `MatFDColoring` object.
1287ec5066bdSBarry Smith 
12881cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetUseMatrixFree()`, `MatCreateSNESMF()`, `SNESComputeJacobianDefaultColor()`
12893565c898SBarry Smith @*/
1290d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetUseMatrixFree(SNES snes, PetscBool mf_operator, PetscBool mf)
1291d71ae5a4SJacob Faibussowitsch {
12923565c898SBarry Smith   PetscFunctionBegin;
12933565c898SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
129488b4c220SStefano Zampini   PetscValidLogicalCollectiveBool(snes, mf_operator, 2);
129588b4c220SStefano Zampini   PetscValidLogicalCollectiveBool(snes, mf, 3);
12964ddffce6SLisandro Dalcin   snes->mf          = mf_operator ? PETSC_TRUE : mf;
12973565c898SBarry Smith   snes->mf_operator = mf_operator;
12983ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
12993565c898SBarry Smith }
13003565c898SBarry Smith 
13013565c898SBarry Smith /*@
1302dc4c0fb0SBarry Smith   SNESGetUseMatrixFree - indicates if the `SNES` uses matrix-free finite difference matrix vector products to apply the Jacobian.
13033565c898SBarry Smith 
1304f6dfbefdSBarry Smith   Not Collective, but the resulting flags will be the same on all MPI ranks
13053565c898SBarry Smith 
13063565c898SBarry Smith   Input Parameter:
1307f6dfbefdSBarry Smith . snes - `SNES` context
13083565c898SBarry Smith 
13093565c898SBarry Smith   Output Parameters:
1310f6dfbefdSBarry Smith + mf_operator - use matrix-free only for the Amat used by `SNESSetJacobian()`, this means the user provided Pmat will continue to be used
1311f6dfbefdSBarry Smith - mf          - use matrix-free for both the Amat and Pmat used by `SNESSetJacobian()`, both the Amat and Pmat set in `SNESSetJacobian()` will be ignored
13123565c898SBarry Smith 
13133565c898SBarry Smith   Level: intermediate
13143565c898SBarry Smith 
13151cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetUseMatrixFree()`, `MatCreateSNESMF()`
13163565c898SBarry Smith @*/
1317d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetUseMatrixFree(SNES snes, PetscBool *mf_operator, PetscBool *mf)
1318d71ae5a4SJacob Faibussowitsch {
13193565c898SBarry Smith   PetscFunctionBegin;
13203565c898SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
13213565c898SBarry Smith   if (mf) *mf = snes->mf;
13223565c898SBarry Smith   if (mf_operator) *mf_operator = snes->mf_operator;
13233ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
13243565c898SBarry Smith }
13253565c898SBarry Smith 
13263565c898SBarry Smith /*@
1327c8228a4eSBarry Smith   SNESGetIterationNumber - Gets the number of nonlinear iterations completed
1328c8228a4eSBarry Smith   at this time.
13299b94acceSBarry Smith 
1330c7afd0dbSLois Curfman McInnes   Not Collective
1331c7afd0dbSLois Curfman McInnes 
13329b94acceSBarry Smith   Input Parameter:
1333f6dfbefdSBarry Smith . snes - `SNES` context
13349b94acceSBarry Smith 
13359b94acceSBarry Smith   Output Parameter:
13369b94acceSBarry Smith . iter - iteration number
13379b94acceSBarry Smith 
1338dc4c0fb0SBarry Smith   Level: intermediate
1339dc4c0fb0SBarry Smith 
1340c8228a4eSBarry Smith   Notes:
1341c8228a4eSBarry Smith   For example, during the computation of iteration 2 this would return 1.
1342c8228a4eSBarry Smith 
1343c8228a4eSBarry Smith   This is useful for using lagged Jacobians (where one does not recompute the
1344f6dfbefdSBarry Smith   Jacobian at each `SNES` iteration). For example, the code
134508405cd6SLois Curfman McInnes .vb
134608405cd6SLois Curfman McInnes       ierr = SNESGetIterationNumber(snes,&it);
134708405cd6SLois Curfman McInnes       if (!(it % 2)) {
134808405cd6SLois Curfman McInnes         [compute Jacobian here]
134908405cd6SLois Curfman McInnes       }
135008405cd6SLois Curfman McInnes .ve
1351f6dfbefdSBarry Smith   can be used in your function that computes the Jacobian to cause the Jacobian to be
1352f6dfbefdSBarry Smith   recomputed every second `SNES` iteration. See also `SNESSetLagJacobian()`
1353c8228a4eSBarry Smith 
1354f6dfbefdSBarry Smith   After the `SNES` solve is complete this will return the number of nonlinear iterations used.
1355c04deec6SBarry Smith 
13561cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetLagJacobian()`, `SNESGetLinearSolveIterations()`
13579b94acceSBarry Smith @*/
1358d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetIterationNumber(SNES snes, PetscInt *iter)
1359d71ae5a4SJacob Faibussowitsch {
13603a40ed3dSBarry Smith   PetscFunctionBegin;
13610700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
13624482741eSBarry Smith   PetscValidIntPointer(iter, 2);
13639b94acceSBarry Smith   *iter = snes->iter;
13643ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
13659b94acceSBarry Smith }
136674679c65SBarry Smith 
1367360c497dSPeter Brune /*@
1368360c497dSPeter Brune   SNESSetIterationNumber - Sets the current iteration number.
1369360c497dSPeter Brune 
1370360c497dSPeter Brune   Not Collective
1371360c497dSPeter Brune 
1372d8d19677SJose E. Roman   Input Parameters:
1373f6dfbefdSBarry Smith + snes - `SNES` context
1374a2b725a8SWilliam Gropp - iter - iteration number
1375360c497dSPeter Brune 
1376360c497dSPeter Brune   Level: developer
1377360c497dSPeter Brune 
13781cc06b55SBarry Smith .seealso: [](ch_snes), `SNESGetLinearSolveIterations()`
1379360c497dSPeter Brune @*/
1380d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetIterationNumber(SNES snes, PetscInt iter)
1381d71ae5a4SJacob Faibussowitsch {
1382360c497dSPeter Brune   PetscFunctionBegin;
1383360c497dSPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
13849566063dSJacob Faibussowitsch   PetscCall(PetscObjectSAWsTakeAccess((PetscObject)snes));
1385360c497dSPeter Brune   snes->iter = iter;
13869566063dSJacob Faibussowitsch   PetscCall(PetscObjectSAWsGrantAccess((PetscObject)snes));
13873ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1388360c497dSPeter Brune }
1389360c497dSPeter Brune 
13909b94acceSBarry Smith /*@
1391b850b91aSLisandro Dalcin   SNESGetNonlinearStepFailures - Gets the number of unsuccessful steps
13929b94acceSBarry Smith   attempted by the nonlinear solver.
13939b94acceSBarry Smith 
1394c7afd0dbSLois Curfman McInnes   Not Collective
1395c7afd0dbSLois Curfman McInnes 
13969b94acceSBarry Smith   Input Parameter:
1397f6dfbefdSBarry Smith . snes - `SNES` context
13989b94acceSBarry Smith 
13999b94acceSBarry Smith   Output Parameter:
14009b94acceSBarry Smith . nfails - number of unsuccessful steps attempted
14019b94acceSBarry Smith 
1402dc4c0fb0SBarry Smith   Level: intermediate
1403dc4c0fb0SBarry Smith 
1404f6dfbefdSBarry Smith   Note:
1405f6dfbefdSBarry Smith   This counter is reset to zero for each successive call to `SNESSolve()`.
1406c96a6f78SLois Curfman McInnes 
14071cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetMaxLinearSolveFailures()`, `SNESGetLinearSolveIterations()`, `SNESSetMaxLinearSolveFailures()`, `SNESGetLinearSolveFailures()`,
1408db781477SPatrick Sanan           `SNESSetMaxNonlinearStepFailures()`, `SNESGetMaxNonlinearStepFailures()`
14099b94acceSBarry Smith @*/
1410d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetNonlinearStepFailures(SNES snes, PetscInt *nfails)
1411d71ae5a4SJacob Faibussowitsch {
14123a40ed3dSBarry Smith   PetscFunctionBegin;
14130700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
14144482741eSBarry Smith   PetscValidIntPointer(nfails, 2);
141550ffb88aSMatthew Knepley   *nfails = snes->numFailures;
14163ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
141750ffb88aSMatthew Knepley }
141850ffb88aSMatthew Knepley 
141950ffb88aSMatthew Knepley /*@
1420b850b91aSLisandro Dalcin   SNESSetMaxNonlinearStepFailures - Sets the maximum number of unsuccessful steps
1421f6dfbefdSBarry Smith   attempted by the nonlinear solver before it gives up and generates an error
142250ffb88aSMatthew Knepley 
142350ffb88aSMatthew Knepley   Not Collective
142450ffb88aSMatthew Knepley 
142550ffb88aSMatthew Knepley   Input Parameters:
1426f6dfbefdSBarry Smith + snes     - `SNES` context
142750ffb88aSMatthew Knepley - maxFails - maximum of unsuccessful steps
142850ffb88aSMatthew Knepley 
142950ffb88aSMatthew Knepley   Level: intermediate
143050ffb88aSMatthew Knepley 
14311cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetErrorIfNotConverged()`, `SNESGetMaxLinearSolveFailures()`, `SNESGetLinearSolveIterations()`, `SNESSetMaxLinearSolveFailures()`, `SNESGetLinearSolveFailures()`,
1432db781477SPatrick Sanan           `SNESGetMaxNonlinearStepFailures()`, `SNESGetNonlinearStepFailures()`
143350ffb88aSMatthew Knepley @*/
1434d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetMaxNonlinearStepFailures(SNES snes, PetscInt maxFails)
1435d71ae5a4SJacob Faibussowitsch {
143650ffb88aSMatthew Knepley   PetscFunctionBegin;
14370700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
143850ffb88aSMatthew Knepley   snes->maxFailures = maxFails;
14393ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
144050ffb88aSMatthew Knepley }
144150ffb88aSMatthew Knepley 
144250ffb88aSMatthew Knepley /*@
1443b850b91aSLisandro Dalcin   SNESGetMaxNonlinearStepFailures - Gets the maximum number of unsuccessful steps
1444f6dfbefdSBarry Smith   attempted by the nonlinear solver before it gives up and generates an error
144550ffb88aSMatthew Knepley 
144650ffb88aSMatthew Knepley   Not Collective
144750ffb88aSMatthew Knepley 
144850ffb88aSMatthew Knepley   Input Parameter:
144920f4b53cSBarry Smith . snes - `SNES` context
145050ffb88aSMatthew Knepley 
145150ffb88aSMatthew Knepley   Output Parameter:
145250ffb88aSMatthew Knepley . maxFails - maximum of unsuccessful steps
145350ffb88aSMatthew Knepley 
145450ffb88aSMatthew Knepley   Level: intermediate
145550ffb88aSMatthew Knepley 
14561cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetErrorIfNotConverged()`, `SNESGetMaxLinearSolveFailures()`, `SNESGetLinearSolveIterations()`, `SNESSetMaxLinearSolveFailures()`, `SNESGetLinearSolveFailures()`,
1457db781477SPatrick Sanan           `SNESSetMaxNonlinearStepFailures()`, `SNESGetNonlinearStepFailures()`
145850ffb88aSMatthew Knepley @*/
1459d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetMaxNonlinearStepFailures(SNES snes, PetscInt *maxFails)
1460d71ae5a4SJacob Faibussowitsch {
146150ffb88aSMatthew Knepley   PetscFunctionBegin;
14620700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
14634482741eSBarry Smith   PetscValidIntPointer(maxFails, 2);
146450ffb88aSMatthew Knepley   *maxFails = snes->maxFailures;
14653ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
14669b94acceSBarry Smith }
1467a847f771SSatish Balay 
14682541af92SBarry Smith /*@
14692541af92SBarry Smith   SNESGetNumberFunctionEvals - Gets the number of user provided function evaluations
1470f6dfbefdSBarry Smith   done by the `SNES` object
14712541af92SBarry Smith 
14722541af92SBarry Smith   Not Collective
14732541af92SBarry Smith 
14742541af92SBarry Smith   Input Parameter:
1475f6dfbefdSBarry Smith . snes - `SNES` context
14762541af92SBarry Smith 
14772541af92SBarry Smith   Output Parameter:
14782541af92SBarry Smith . nfuncs - number of evaluations
14792541af92SBarry Smith 
14802541af92SBarry Smith   Level: intermediate
14812541af92SBarry Smith 
1482f6dfbefdSBarry Smith   Note:
1483f6dfbefdSBarry Smith   Reset every time `SNESSolve()` is called unless `SNESSetCountersReset()` is used.
1484971e163fSPeter Brune 
14851cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetMaxLinearSolveFailures()`, `SNESGetLinearSolveIterations()`, `SNESSetMaxLinearSolveFailures()`, `SNESGetLinearSolveFailures()`, `SNESSetCountersReset()`
14862541af92SBarry Smith @*/
1487d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetNumberFunctionEvals(SNES snes, PetscInt *nfuncs)
1488d71ae5a4SJacob Faibussowitsch {
14892541af92SBarry Smith   PetscFunctionBegin;
14900700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
14912541af92SBarry Smith   PetscValidIntPointer(nfuncs, 2);
14922541af92SBarry Smith   *nfuncs = snes->nfuncs;
14933ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
14942541af92SBarry Smith }
14952541af92SBarry Smith 
14963d4c4710SBarry Smith /*@
14973d4c4710SBarry Smith   SNESGetLinearSolveFailures - Gets the number of failed (non-converged)
14983d4c4710SBarry Smith   linear solvers.
14993d4c4710SBarry Smith 
15003d4c4710SBarry Smith   Not Collective
15013d4c4710SBarry Smith 
15023d4c4710SBarry Smith   Input Parameter:
1503f6dfbefdSBarry Smith . snes - `SNES` context
15043d4c4710SBarry Smith 
15053d4c4710SBarry Smith   Output Parameter:
15063d4c4710SBarry Smith . nfails - number of failed solves
15073d4c4710SBarry Smith 
1508f6dfbefdSBarry Smith   Options Database Key:
15099d85da0cSMatthew G. Knepley . -snes_max_linear_solve_fail <num> - The number of failures before the solve is terminated
15109d85da0cSMatthew G. Knepley 
1511f6dfbefdSBarry Smith   Level: intermediate
1512f6dfbefdSBarry Smith 
1513f6dfbefdSBarry Smith   Note:
1514f6dfbefdSBarry Smith   This counter is reset to zero for each successive call to `SNESSolve()`.
15153d4c4710SBarry Smith 
15161cc06b55SBarry Smith .seealso: [](ch_snes), `SNESGetMaxLinearSolveFailures()`, `SNESGetLinearSolveIterations()`, `SNESSetMaxLinearSolveFailures()`
15173d4c4710SBarry Smith @*/
1518d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetLinearSolveFailures(SNES snes, PetscInt *nfails)
1519d71ae5a4SJacob Faibussowitsch {
15203d4c4710SBarry Smith   PetscFunctionBegin;
15210700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
15223d4c4710SBarry Smith   PetscValidIntPointer(nfails, 2);
15233d4c4710SBarry Smith   *nfails = snes->numLinearSolveFailures;
15243ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
15253d4c4710SBarry Smith }
15263d4c4710SBarry Smith 
15273d4c4710SBarry Smith /*@
15283d4c4710SBarry Smith   SNESSetMaxLinearSolveFailures - the number of failed linear solve attempts
1529f6dfbefdSBarry Smith   allowed before `SNES` returns with a diverged reason of `SNES_DIVERGED_LINEAR_SOLVE`
15303d4c4710SBarry Smith 
1531c3339decSBarry Smith   Logically Collective
15323d4c4710SBarry Smith 
15333d4c4710SBarry Smith   Input Parameters:
1534f6dfbefdSBarry Smith + snes     - `SNES` context
15353d4c4710SBarry Smith - maxFails - maximum allowed linear solve failures
15363d4c4710SBarry Smith 
1537f6dfbefdSBarry Smith   Options Database Key:
15389d85da0cSMatthew G. Knepley . -snes_max_linear_solve_fail <num> - The number of failures before the solve is terminated
15399d85da0cSMatthew G. Knepley 
1540dc4c0fb0SBarry Smith   Level: intermediate
1541dc4c0fb0SBarry Smith 
1542f6dfbefdSBarry Smith   Note:
1543f6dfbefdSBarry Smith   By default this is 0; that is `SNES` returns on the first failed linear solve
15443d4c4710SBarry Smith 
15451cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetErrorIfNotConverged()`, `SNESGetLinearSolveFailures()`, `SNESGetMaxLinearSolveFailures()`, `SNESGetLinearSolveIterations()`
15463d4c4710SBarry Smith @*/
1547d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetMaxLinearSolveFailures(SNES snes, PetscInt maxFails)
1548d71ae5a4SJacob Faibussowitsch {
15493d4c4710SBarry Smith   PetscFunctionBegin;
15500700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1551c5eb9154SBarry Smith   PetscValidLogicalCollectiveInt(snes, maxFails, 2);
15523d4c4710SBarry Smith   snes->maxLinearSolveFailures = maxFails;
15533ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
15543d4c4710SBarry Smith }
15553d4c4710SBarry Smith 
15563d4c4710SBarry Smith /*@
15573d4c4710SBarry Smith   SNESGetMaxLinearSolveFailures - gets the maximum number of linear solve failures that
1558f6dfbefdSBarry Smith   are allowed before `SNES` returns as unsuccessful
15593d4c4710SBarry Smith 
15603d4c4710SBarry Smith   Not Collective
15613d4c4710SBarry Smith 
15623d4c4710SBarry Smith   Input Parameter:
1563f6dfbefdSBarry Smith . snes - `SNES` context
15643d4c4710SBarry Smith 
15653d4c4710SBarry Smith   Output Parameter:
15663d4c4710SBarry Smith . maxFails - maximum of unsuccessful solves allowed
15673d4c4710SBarry Smith 
15683d4c4710SBarry Smith   Level: intermediate
15693d4c4710SBarry Smith 
1570f6dfbefdSBarry Smith   Note:
1571f6dfbefdSBarry Smith   By default this is 1; that is `SNES` returns on the first failed linear solve
15723d4c4710SBarry Smith 
15731cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetErrorIfNotConverged()`, `SNESGetLinearSolveFailures()`, `SNESGetLinearSolveIterations()`, `SNESSetMaxLinearSolveFailures()`,
15743d4c4710SBarry Smith @*/
1575d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetMaxLinearSolveFailures(SNES snes, PetscInt *maxFails)
1576d71ae5a4SJacob Faibussowitsch {
15773d4c4710SBarry Smith   PetscFunctionBegin;
15780700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
15793d4c4710SBarry Smith   PetscValidIntPointer(maxFails, 2);
15803d4c4710SBarry Smith   *maxFails = snes->maxLinearSolveFailures;
15813ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
15823d4c4710SBarry Smith }
15833d4c4710SBarry Smith 
1584c96a6f78SLois Curfman McInnes /*@
1585b850b91aSLisandro Dalcin   SNESGetLinearSolveIterations - Gets the total number of linear iterations
1586c96a6f78SLois Curfman McInnes   used by the nonlinear solver.
1587c96a6f78SLois Curfman McInnes 
1588c7afd0dbSLois Curfman McInnes   Not Collective
1589c7afd0dbSLois Curfman McInnes 
1590c96a6f78SLois Curfman McInnes   Input Parameter:
1591f6dfbefdSBarry Smith . snes - `SNES` context
1592c96a6f78SLois Curfman McInnes 
1593c96a6f78SLois Curfman McInnes   Output Parameter:
1594c96a6f78SLois Curfman McInnes . lits - number of linear iterations
1595c96a6f78SLois Curfman McInnes 
1596dc4c0fb0SBarry Smith   Level: intermediate
1597dc4c0fb0SBarry Smith 
1598c96a6f78SLois Curfman McInnes   Notes:
1599f6dfbefdSBarry Smith   This counter is reset to zero for each successive call to `SNESSolve()` unless `SNESSetCountersReset()` is used.
1600c96a6f78SLois Curfman McInnes 
1601f6dfbefdSBarry Smith   If the linear solver fails inside the `SNESSolve()` the iterations for that call to the linear solver are not included. If you wish to count them
1602f6dfbefdSBarry Smith   then call `KSPGetIterationNumber()` after the failed solve.
1603010be392SBarry Smith 
16041cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetIterationNumber()`, `SNESGetLinearSolveFailures()`, `SNESGetMaxLinearSolveFailures()`, `SNESSetCountersReset()`
1605c96a6f78SLois Curfman McInnes @*/
1606d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetLinearSolveIterations(SNES snes, PetscInt *lits)
1607d71ae5a4SJacob Faibussowitsch {
16083a40ed3dSBarry Smith   PetscFunctionBegin;
16090700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
16104482741eSBarry Smith   PetscValidIntPointer(lits, 2);
1611c96a6f78SLois Curfman McInnes   *lits = snes->linear_its;
16123ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1613c96a6f78SLois Curfman McInnes }
1614c96a6f78SLois Curfman McInnes 
1615971e163fSPeter Brune /*@
1616971e163fSPeter Brune   SNESSetCountersReset - Sets whether or not the counters for linear iterations and function evaluations
1617f6dfbefdSBarry Smith   are reset every time `SNESSolve()` is called.
1618971e163fSPeter Brune 
1619c3339decSBarry Smith   Logically Collective
1620971e163fSPeter Brune 
1621d8d19677SJose E. Roman   Input Parameters:
1622f6dfbefdSBarry Smith + snes  - `SNES` context
1623f6dfbefdSBarry Smith - reset - whether to reset the counters or not, defaults to `PETSC_TRUE`
1624971e163fSPeter Brune 
1625971e163fSPeter Brune   Level: developer
1626971e163fSPeter Brune 
16271cc06b55SBarry Smith .seealso: [](ch_snes), `SNESGetNumberFunctionEvals()`, `SNESGetLinearSolveIterations()`, `SNESGetNPC()`
1628971e163fSPeter Brune @*/
1629d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetCountersReset(SNES snes, PetscBool reset)
1630d71ae5a4SJacob Faibussowitsch {
1631971e163fSPeter Brune   PetscFunctionBegin;
1632971e163fSPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1633971e163fSPeter Brune   PetscValidLogicalCollectiveBool(snes, reset, 2);
1634971e163fSPeter Brune   snes->counters_reset = reset;
16353ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1636971e163fSPeter Brune }
1637971e163fSPeter Brune 
16382999313aSBarry Smith /*@
1639f6dfbefdSBarry Smith   SNESSetKSP - Sets a `KSP` context for the `SNES` object to use
16402999313aSBarry Smith 
1641f6dfbefdSBarry Smith   Not Collective, but the `SNES` and `KSP` objects must live on the same MPI_Comm
16422999313aSBarry Smith 
16432999313aSBarry Smith   Input Parameters:
1644f6dfbefdSBarry Smith + snes - the `SNES` context
1645f6dfbefdSBarry Smith - ksp  - the `KSP` context
16462999313aSBarry Smith 
1647dc4c0fb0SBarry Smith   Level: developer
1648dc4c0fb0SBarry Smith 
16492999313aSBarry Smith   Notes:
1650f6dfbefdSBarry Smith   The `SNES` object already has its `KSP` object, you can obtain with `SNESGetKSP()`
16512999313aSBarry Smith   so this routine is rarely needed.
16522999313aSBarry Smith 
1653f6dfbefdSBarry Smith   The `KSP` object that is already in the `SNES` object has its reference count
16542999313aSBarry Smith   decreased by one.
16552999313aSBarry Smith 
16561cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `KSP`, `KSPGetPC()`, `SNESCreate()`, `KSPCreate()`, `SNESSetKSP()`
16572999313aSBarry Smith @*/
1658d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetKSP(SNES snes, KSP ksp)
1659d71ae5a4SJacob Faibussowitsch {
16602999313aSBarry Smith   PetscFunctionBegin;
16610700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
16620700a824SBarry Smith   PetscValidHeaderSpecific(ksp, KSP_CLASSID, 2);
16632999313aSBarry Smith   PetscCheckSameComm(snes, 1, ksp, 2);
16649566063dSJacob Faibussowitsch   PetscCall(PetscObjectReference((PetscObject)ksp));
16659566063dSJacob Faibussowitsch   if (snes->ksp) PetscCall(PetscObjectDereference((PetscObject)snes->ksp));
16662999313aSBarry Smith   snes->ksp = ksp;
16673ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
16682999313aSBarry Smith }
16692999313aSBarry Smith 
167052baeb72SSatish Balay /*@
1671dc4c0fb0SBarry Smith   SNESCreate - Creates a nonlinear solver context used to manage a set of nonlinear solves
16729b94acceSBarry Smith 
1673d083f849SBarry Smith   Collective
1674c7afd0dbSLois Curfman McInnes 
1675f6dfbefdSBarry Smith   Input Parameter:
1676906ed7ccSBarry Smith . comm - MPI communicator
16779b94acceSBarry Smith 
16789b94acceSBarry Smith   Output Parameter:
167920f4b53cSBarry Smith . outsnes - the new `SNES` context
16809b94acceSBarry Smith 
1681c7afd0dbSLois Curfman McInnes   Options Database Keys:
1682dc4c0fb0SBarry Smith + -snes_mf          - Activates default matrix-free Jacobian-vector products, and no preconditioning matrix
1683dc4c0fb0SBarry Smith . -snes_mf_operator - Activates default matrix-free Jacobian-vector products, and a user-provided preconditioning matrix
1684dc4c0fb0SBarry Smith                as set by `SNESSetJacobian()`
1685dc4c0fb0SBarry Smith . -snes_fd_coloring - uses a relative fast computation of the Jacobian using finite differences and a graph coloring
1686c7afd0dbSLois Curfman McInnes - -snes_fd          - Uses (slow!) finite differences to compute Jacobian
1687c1f60f51SBarry Smith 
168836851e7fSLois Curfman McInnes   Level: beginner
168936851e7fSLois Curfman McInnes 
169095452b02SPatrick Sanan   Developer Notes:
1691f6dfbefdSBarry Smith   `SNES` always creates a `KSP` object even though many `SNES` methods do not use it. This is
1692efd4aadfSBarry Smith   unfortunate and should be fixed at some point. The flag snes->usesksp indicates if the
1693f6dfbefdSBarry Smith   particular method does use `KSP` and regulates if the information about the `KSP` is printed
1694f6dfbefdSBarry Smith   in `SNESView()`.
1695efd4aadfSBarry Smith 
1696f6dfbefdSBarry Smith   `TSSetFromOptions()` does call `SNESSetFromOptions()` which can lead to users being confused
1697f6dfbefdSBarry Smith   by help messages about meaningless `SNES` options.
1698f6dfbefdSBarry Smith 
1699dc4c0fb0SBarry Smith   `SNES` always creates the snes->kspconvctx even though it is used by only one type. This should be fixed.
1700efd4aadfSBarry Smith 
1701*e4094ef1SJacob Faibussowitsch .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESDestroy()`, `SNESSetLagPreconditioner()`, `SNESSetLagJacobian()`
17029b94acceSBarry Smith @*/
1703d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESCreate(MPI_Comm comm, SNES *outsnes)
1704d71ae5a4SJacob Faibussowitsch {
17059b94acceSBarry Smith   SNES       snes;
1706fa9f3622SBarry Smith   SNESKSPEW *kctx;
170737fcc0dbSBarry Smith 
17083a40ed3dSBarry Smith   PetscFunctionBegin;
1709ed1caa07SMatthew Knepley   PetscValidPointer(outsnes, 2);
17100298fd71SBarry Smith   *outsnes = NULL;
17119566063dSJacob Faibussowitsch   PetscCall(SNESInitializePackage());
17128ba1e511SMatthew Knepley 
17139566063dSJacob Faibussowitsch   PetscCall(PetscHeaderCreate(snes, SNES_CLASSID, "SNES", "Nonlinear solver", "SNES", comm, SNESDestroy, SNESView));
17147adad957SLisandro Dalcin 
17158d359177SBarry Smith   snes->ops->converged       = SNESConvergedDefault;
17162c155ee1SBarry Smith   snes->usesksp              = PETSC_TRUE;
171788976e71SPeter Brune   snes->tolerancesset        = PETSC_FALSE;
17189b94acceSBarry Smith   snes->max_its              = 50;
17199750a799SBarry Smith   snes->max_funcs            = 10000;
17209b94acceSBarry Smith   snes->norm                 = 0.0;
1721c1e67a49SFande Kong   snes->xnorm                = 0.0;
1722c1e67a49SFande Kong   snes->ynorm                = 0.0;
1723365a6726SPeter Brune   snes->normschedule         = SNES_NORM_ALWAYS;
17246c67d002SPeter Brune   snes->functype             = SNES_FUNCTION_DEFAULT;
17258ca48ce9SPierre Jolivet   snes->rtol                 = PetscDefined(USE_REAL_SINGLE) ? 1.e-5 : 1.e-8;
1726b4874afaSBarry Smith   snes->ttol                 = 0.0;
17278ca48ce9SPierre Jolivet   snes->abstol               = PetscDefined(USE_REAL_SINGLE) ? 1.e-25 : 1.e-50;
17288ca48ce9SPierre Jolivet   snes->stol                 = PetscDefined(USE_REAL_SINGLE) ? 1.e-5 : 1.e-8;
17298ca48ce9SPierre Jolivet   snes->deltatol             = PetscDefined(USE_REAL_SINGLE) ? 1.e-6 : 1.e-12;
1730e37c518bSBarry Smith   snes->divtol               = 1.e4;
1731e37c518bSBarry Smith   snes->rnorm0               = 0;
17329b94acceSBarry Smith   snes->nfuncs               = 0;
173350ffb88aSMatthew Knepley   snes->numFailures          = 0;
173450ffb88aSMatthew Knepley   snes->maxFailures          = 1;
17357a00f4a9SLois Curfman McInnes   snes->linear_its           = 0;
1736e35cf81dSBarry Smith   snes->lagjacobian          = 1;
173737ec4e1aSPeter Brune   snes->jac_iter             = 0;
173837ec4e1aSPeter Brune   snes->lagjac_persist       = PETSC_FALSE;
1739a8054027SBarry Smith   snes->lagpreconditioner    = 1;
174037ec4e1aSPeter Brune   snes->pre_iter             = 0;
174137ec4e1aSPeter Brune   snes->lagpre_persist       = PETSC_FALSE;
1742639f9d9dSBarry Smith   snes->numbermonitors       = 0;
1743c4421ceaSFande Kong   snes->numberreasonviews    = 0;
17449e5d0892SLisandro Dalcin   snes->data                 = NULL;
17454dc4c822SBarry Smith   snes->setupcalled          = PETSC_FALSE;
1746186905e3SBarry Smith   snes->ksp_ewconv           = PETSC_FALSE;
17476f24a144SLois Curfman McInnes   snes->nwork                = 0;
17489e5d0892SLisandro Dalcin   snes->work                 = NULL;
174958c9b817SLisandro Dalcin   snes->nvwork               = 0;
17509e5d0892SLisandro Dalcin   snes->vwork                = NULL;
1751758f92a0SBarry Smith   snes->conv_hist_len        = 0;
1752758f92a0SBarry Smith   snes->conv_hist_max        = 0;
17530298fd71SBarry Smith   snes->conv_hist            = NULL;
17540298fd71SBarry Smith   snes->conv_hist_its        = NULL;
1755758f92a0SBarry Smith   snes->conv_hist_reset      = PETSC_TRUE;
1756971e163fSPeter Brune   snes->counters_reset       = PETSC_TRUE;
1757e4ed7901SPeter Brune   snes->vec_func_init_set    = PETSC_FALSE;
1758184914b5SBarry Smith   snes->reason               = SNES_CONVERGED_ITERATING;
1759efd4aadfSBarry Smith   snes->npcside              = PC_RIGHT;
1760b3cd9a81SMatthew G. Knepley   snes->setfromoptionscalled = 0;
1761c40d0f55SPeter Brune 
1762d8f46077SPeter Brune   snes->mf          = PETSC_FALSE;
1763d8f46077SPeter Brune   snes->mf_operator = PETSC_FALSE;
1764d8f46077SPeter Brune   snes->mf_version  = 1;
1765d8f46077SPeter Brune 
17663d4c4710SBarry Smith   snes->numLinearSolveFailures = 0;
17673d4c4710SBarry Smith   snes->maxLinearSolveFailures = 1;
17683d4c4710SBarry Smith 
1769349187a7SBarry Smith   snes->vizerotolerance     = 1.e-8;
177076bd3646SJed Brown   snes->checkjacdomainerror = PetscDefined(USE_DEBUG) ? PETSC_TRUE : PETSC_FALSE;
1771349187a7SBarry Smith 
17724fc747eaSLawrence Mitchell   /* Set this to true if the implementation of SNESSolve_XXX does compute the residual at the final solution. */
17734fc747eaSLawrence Mitchell   snes->alwayscomputesfinalresidual = PETSC_FALSE;
17744fc747eaSLawrence Mitchell 
17759b94acceSBarry Smith   /* Create context to compute Eisenstat-Walker relative tolerance for KSP */
17764dfa11a4SJacob Faibussowitsch   PetscCall(PetscNew(&kctx));
1777f5af7f23SKarl Rupp 
17789b94acceSBarry Smith   snes->kspconvctx  = (void *)kctx;
17799b94acceSBarry Smith   kctx->version     = 2;
17800f0abf79SStefano Zampini   kctx->rtol_0      = 0.3; /* Eisenstat and Walker suggest rtol_0=.5, but
17819b94acceSBarry Smith                              this was too large for some test cases */
178275567043SBarry Smith   kctx->rtol_last   = 0.0;
17830f0abf79SStefano Zampini   kctx->rtol_max    = 0.9;
17849b94acceSBarry Smith   kctx->gamma       = 1.0;
17850f0abf79SStefano Zampini   kctx->alpha       = 0.5 * (1.0 + PetscSqrtReal(5.0));
178671f87433Sdalcinl   kctx->alpha2      = kctx->alpha;
17870f0abf79SStefano Zampini   kctx->threshold   = 0.1;
178875567043SBarry Smith   kctx->lresid_last = 0.0;
178975567043SBarry Smith   kctx->norm_last   = 0.0;
17909b94acceSBarry Smith 
17910f0abf79SStefano Zampini   kctx->rk_last     = 0.0;
17920f0abf79SStefano Zampini   kctx->rk_last_2   = 0.0;
17930f0abf79SStefano Zampini   kctx->rtol_last_2 = 0.0;
17940f0abf79SStefano Zampini   kctx->v4_p1       = 0.1;
17950f0abf79SStefano Zampini   kctx->v4_p2       = 0.4;
17960f0abf79SStefano Zampini   kctx->v4_p3       = 0.7;
17970f0abf79SStefano Zampini   kctx->v4_m1       = 0.8;
17980f0abf79SStefano Zampini   kctx->v4_m2       = 0.5;
17990f0abf79SStefano Zampini   kctx->v4_m3       = 0.1;
18000f0abf79SStefano Zampini   kctx->v4_m4       = 0.5;
18010f0abf79SStefano Zampini 
18029b94acceSBarry Smith   *outsnes = snes;
18033ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
18049b94acceSBarry Smith }
18059b94acceSBarry Smith 
180688f0584fSBarry Smith /*MC
1807f6dfbefdSBarry Smith     SNESFunction - Functional form used to convey the nonlinear function to `SNES` in `SNESSetFunction()`
180888f0584fSBarry Smith 
180988f0584fSBarry Smith      Synopsis:
1810411c0326SBarry Smith      #include "petscsnes.h"
1811411c0326SBarry Smith      PetscErrorCode SNESFunction(SNES snes,Vec x,Vec f,void *ctx);
181288f0584fSBarry Smith 
1813c3339decSBarry Smith      Collective
18141843f636SBarry Smith 
181588f0584fSBarry Smith      Input Parameters:
1816f6dfbefdSBarry Smith +     snes - the `SNES` context
181788f0584fSBarry Smith .     x    - state at which to evaluate residual
1818f6dfbefdSBarry Smith -     ctx     - optional user-defined function context, passed in with `SNESSetFunction()`
181988f0584fSBarry Smith 
182088f0584fSBarry Smith      Output Parameter:
182188f0584fSBarry Smith .     f  - vector to put residual (function value)
182288f0584fSBarry Smith 
1823878cb397SSatish Balay    Level: intermediate
1824878cb397SSatish Balay 
18251cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetFunction()`, `SNESGetFunction()`
182688f0584fSBarry Smith M*/
182788f0584fSBarry Smith 
18289b94acceSBarry Smith /*@C
18299b94acceSBarry Smith   SNESSetFunction - Sets the function evaluation routine and function
1830f6dfbefdSBarry Smith   vector for use by the `SNES` routines in solving systems of nonlinear
18319b94acceSBarry Smith   equations.
18329b94acceSBarry Smith 
1833c3339decSBarry Smith   Logically Collective
1834fee21e36SBarry Smith 
1835c7afd0dbSLois Curfman McInnes   Input Parameters:
1836f6dfbefdSBarry Smith + snes - the `SNES` context
1837dc4c0fb0SBarry Smith . r    - vector to store function values, may be `NULL`
183820f4b53cSBarry Smith . f    - function evaluation routine;  for calling sequence see `SNESFunction`
1839c7afd0dbSLois Curfman McInnes - ctx  - [optional] user-defined context for private data for the
1840dc4c0fb0SBarry Smith          function evaluation routine (may be `NULL`)
18419b94acceSBarry Smith 
184236851e7fSLois Curfman McInnes   Level: beginner
184336851e7fSLois Curfman McInnes 
18441cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetFunction()`, `SNESComputeFunction()`, `SNESSetJacobian()`, `SNESSetPicard()`, `SNESFunction`
18459b94acceSBarry Smith @*/
1846d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetFunction(SNES snes, Vec r, PetscErrorCode (*f)(SNES, Vec, Vec, void *), void *ctx)
1847d71ae5a4SJacob Faibussowitsch {
18486cab3a1bSJed Brown   DM dm;
18496cab3a1bSJed Brown 
18503a40ed3dSBarry Smith   PetscFunctionBegin;
18510700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1852d2a683ecSLisandro Dalcin   if (r) {
1853d2a683ecSLisandro Dalcin     PetscValidHeaderSpecific(r, VEC_CLASSID, 2);
1854d2a683ecSLisandro Dalcin     PetscCheckSameComm(snes, 1, r, 2);
18559566063dSJacob Faibussowitsch     PetscCall(PetscObjectReference((PetscObject)r));
18569566063dSJacob Faibussowitsch     PetscCall(VecDestroy(&snes->vec_func));
185785385478SLisandro Dalcin     snes->vec_func = r;
1858d2a683ecSLisandro Dalcin   }
18599566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
18609566063dSJacob Faibussowitsch   PetscCall(DMSNESSetFunction(dm, f, ctx));
186148a46eb9SPierre Jolivet   if (f == SNESPicardComputeFunction) PetscCall(DMSNESSetMFFunction(dm, SNESPicardComputeMFFunction, ctx));
18623ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
18639b94acceSBarry Smith }
18649b94acceSBarry Smith 
1865e4ed7901SPeter Brune /*@C
1866e4ed7901SPeter Brune   SNESSetInitialFunction - Sets the function vector to be used as the
1867f6dfbefdSBarry Smith   initial function value at the initialization of the method.  In some
1868e4ed7901SPeter Brune   instances, the user has precomputed the function before calling
1869f6dfbefdSBarry Smith   `SNESSolve()`.  This function allows one to avoid a redundant call
1870f6dfbefdSBarry Smith   to `SNESComputeFunction()` in that case.
1871e4ed7901SPeter Brune 
1872c3339decSBarry Smith   Logically Collective
1873e4ed7901SPeter Brune 
1874e4ed7901SPeter Brune   Input Parameters:
1875f6dfbefdSBarry Smith + snes - the `SNES` context
1876e4ed7901SPeter Brune - f    - vector to store function value
1877e4ed7901SPeter Brune 
1878dc4c0fb0SBarry Smith   Level: developer
1879dc4c0fb0SBarry Smith 
1880e4ed7901SPeter Brune   Notes:
1881e4ed7901SPeter Brune   This should not be modified during the solution procedure.
1882e4ed7901SPeter Brune 
1883f6dfbefdSBarry Smith   This is used extensively in the `SNESFAS` hierarchy and in nonlinear preconditioning.
1884e4ed7901SPeter Brune 
18851cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESFAS`, `SNESSetFunction()`, `SNESComputeFunction()`, `SNESSetInitialFunctionNorm()`
1886e4ed7901SPeter Brune @*/
1887d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetInitialFunction(SNES snes, Vec f)
1888d71ae5a4SJacob Faibussowitsch {
1889e4ed7901SPeter Brune   Vec vec_func;
1890e4ed7901SPeter Brune 
1891e4ed7901SPeter Brune   PetscFunctionBegin;
1892e4ed7901SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1893e4ed7901SPeter Brune   PetscValidHeaderSpecific(f, VEC_CLASSID, 2);
1894e4ed7901SPeter Brune   PetscCheckSameComm(snes, 1, f, 2);
1895efd4aadfSBarry Smith   if (snes->npcside == PC_LEFT && snes->functype == SNES_FUNCTION_PRECONDITIONED) {
1896902f982fSPeter Brune     snes->vec_func_init_set = PETSC_FALSE;
18973ba16761SJacob Faibussowitsch     PetscFunctionReturn(PETSC_SUCCESS);
1898902f982fSPeter Brune   }
18999566063dSJacob Faibussowitsch   PetscCall(SNESGetFunction(snes, &vec_func, NULL, NULL));
19009566063dSJacob Faibussowitsch   PetscCall(VecCopy(f, vec_func));
1901f5af7f23SKarl Rupp 
1902217b9c2eSPeter Brune   snes->vec_func_init_set = PETSC_TRUE;
19033ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1904e4ed7901SPeter Brune }
1905e4ed7901SPeter Brune 
1906534ebe21SPeter Brune /*@
1907f6dfbefdSBarry Smith   SNESSetNormSchedule - Sets the `SNESNormSchedule` used in convergence and monitoring
1908f6dfbefdSBarry Smith   of the `SNES` method, when norms are computed in the solving process
1909534ebe21SPeter Brune 
1910c3339decSBarry Smith   Logically Collective
1911534ebe21SPeter Brune 
1912534ebe21SPeter Brune   Input Parameters:
1913f6dfbefdSBarry Smith + snes         - the `SNES` context
1914365a6726SPeter Brune - normschedule - the frequency of norm computation
1915534ebe21SPeter Brune 
1916517f1916SMatthew G. Knepley   Options Database Key:
191767b8a455SSatish Balay . -snes_norm_schedule <none, always, initialonly, finalonly, initialfinalonly> - set the schedule
1918517f1916SMatthew G. Knepley 
1919dc4c0fb0SBarry Smith   Level: advanced
1920dc4c0fb0SBarry Smith 
1921534ebe21SPeter Brune   Notes:
1922f6dfbefdSBarry Smith   Only certain `SNES` methods support certain `SNESNormSchedules`.  Most require evaluation
1923534ebe21SPeter Brune   of the nonlinear function and the taking of its norm at every iteration to
1924534ebe21SPeter Brune   even ensure convergence at all.  However, methods such as custom Gauss-Seidel methods
1925f6dfbefdSBarry Smith   `SNESNGS` and the like do not require the norm of the function to be computed, and therefore
1926534ebe21SPeter Brune   may either be monitored for convergence or not.  As these are often used as nonlinear
1927534ebe21SPeter Brune   preconditioners, monitoring the norm of their error is not a useful enterprise within
1928534ebe21SPeter Brune   their solution.
1929534ebe21SPeter Brune 
1930*e4094ef1SJacob Faibussowitsch .seealso: [](ch_snes), `SNESNormSchedule`, `SNESGetNormSchedule()`, `SNESComputeFunction()`, `VecNorm()`, `SNESSetFunction()`, `SNESSetInitialFunction()`
1931534ebe21SPeter Brune @*/
1932d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetNormSchedule(SNES snes, SNESNormSchedule normschedule)
1933d71ae5a4SJacob Faibussowitsch {
1934534ebe21SPeter Brune   PetscFunctionBegin;
1935534ebe21SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1936365a6726SPeter Brune   snes->normschedule = normschedule;
19373ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1938534ebe21SPeter Brune }
1939534ebe21SPeter Brune 
1940534ebe21SPeter Brune /*@
1941f6dfbefdSBarry Smith   SNESGetNormSchedule - Gets the `SNESNormSchedule` used in convergence and monitoring
1942f6dfbefdSBarry Smith   of the `SNES` method.
1943534ebe21SPeter Brune 
1944c3339decSBarry Smith   Logically Collective
1945534ebe21SPeter Brune 
1946534ebe21SPeter Brune   Input Parameters:
1947f6dfbefdSBarry Smith + snes         - the `SNES` context
1948365a6726SPeter Brune - normschedule - the type of the norm used
1949534ebe21SPeter Brune 
1950534ebe21SPeter Brune   Level: advanced
1951534ebe21SPeter Brune 
19521cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetNormSchedule()`, `SNESComputeFunction()`, `VecNorm()`, `SNESSetFunction()`, `SNESSetInitialFunction()`, `SNESNormSchedule`
1953534ebe21SPeter Brune @*/
1954d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetNormSchedule(SNES snes, SNESNormSchedule *normschedule)
1955d71ae5a4SJacob Faibussowitsch {
1956534ebe21SPeter Brune   PetscFunctionBegin;
1957534ebe21SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1958365a6726SPeter Brune   *normschedule = snes->normschedule;
19593ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1960534ebe21SPeter Brune }
1961534ebe21SPeter Brune 
1962c5ce4427SMatthew G. Knepley /*@
1963c5ce4427SMatthew G. Knepley   SNESSetFunctionNorm - Sets the last computed residual norm.
1964c5ce4427SMatthew G. Knepley 
1965c3339decSBarry Smith   Logically Collective
1966c5ce4427SMatthew G. Knepley 
1967c5ce4427SMatthew G. Knepley   Input Parameters:
1968f6dfbefdSBarry Smith + snes - the `SNES` context
1969f6dfbefdSBarry Smith - norm - the value of the norm
1970c5ce4427SMatthew G. Knepley 
1971c5ce4427SMatthew G. Knepley   Level: developer
1972c5ce4427SMatthew G. Knepley 
19731cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetNormSchedule()`, `SNESComputeFunction()`, `VecNorm()`, `SNESSetFunction()`, `SNESSetInitialFunction()`, `SNESNormSchedule`
1974c5ce4427SMatthew G. Knepley @*/
1975d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetFunctionNorm(SNES snes, PetscReal norm)
1976d71ae5a4SJacob Faibussowitsch {
1977c5ce4427SMatthew G. Knepley   PetscFunctionBegin;
1978c5ce4427SMatthew G. Knepley   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1979c5ce4427SMatthew G. Knepley   snes->norm = norm;
19803ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1981c5ce4427SMatthew G. Knepley }
1982c5ce4427SMatthew G. Knepley 
1983c5ce4427SMatthew G. Knepley /*@
1984c5ce4427SMatthew G. Knepley   SNESGetFunctionNorm - Gets the last computed norm of the residual
1985c5ce4427SMatthew G. Knepley 
1986c5ce4427SMatthew G. Knepley   Not Collective
1987c5ce4427SMatthew G. Knepley 
1988c5ce4427SMatthew G. Knepley   Input Parameter:
1989f6dfbefdSBarry Smith . snes - the `SNES` context
1990c5ce4427SMatthew G. Knepley 
1991c5ce4427SMatthew G. Knepley   Output Parameter:
1992c5ce4427SMatthew G. Knepley . norm - the last computed residual norm
1993c5ce4427SMatthew G. Knepley 
1994c5ce4427SMatthew G. Knepley   Level: developer
1995c5ce4427SMatthew G. Knepley 
19961cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetNormSchedule()`, `SNESComputeFunction()`, `VecNorm()`, `SNESSetFunction()`, `SNESSetInitialFunction()`, `SNESNormSchedule`
1997c5ce4427SMatthew G. Knepley @*/
1998d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetFunctionNorm(SNES snes, PetscReal *norm)
1999d71ae5a4SJacob Faibussowitsch {
2000c5ce4427SMatthew G. Knepley   PetscFunctionBegin;
2001c5ce4427SMatthew G. Knepley   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2002dadcf809SJacob Faibussowitsch   PetscValidRealPointer(norm, 2);
2003c5ce4427SMatthew G. Knepley   *norm = snes->norm;
20043ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2005c5ce4427SMatthew G. Knepley }
2006c5ce4427SMatthew G. Knepley 
2007c1e67a49SFande Kong /*@
2008f6dfbefdSBarry Smith   SNESGetUpdateNorm - Gets the last computed norm of the solution update
2009c1e67a49SFande Kong 
2010c1e67a49SFande Kong   Not Collective
2011c1e67a49SFande Kong 
2012c1e67a49SFande Kong   Input Parameter:
2013f6dfbefdSBarry Smith . snes - the `SNES` context
2014c1e67a49SFande Kong 
2015c1e67a49SFande Kong   Output Parameter:
2016c1e67a49SFande Kong . ynorm - the last computed update norm
2017c1e67a49SFande Kong 
2018c1e67a49SFande Kong   Level: developer
2019c1e67a49SFande Kong 
2020f6dfbefdSBarry Smith   Note:
2021f6dfbefdSBarry Smith   The new solution is the current solution plus the update, so this norm is an indication of the size of the update
2022f6dfbefdSBarry Smith 
20231cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetNormSchedule()`, `SNESComputeFunction()`, `SNESGetFunctionNorm()`
2024c1e67a49SFande Kong @*/
2025d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetUpdateNorm(SNES snes, PetscReal *ynorm)
2026d71ae5a4SJacob Faibussowitsch {
2027c1e67a49SFande Kong   PetscFunctionBegin;
2028c1e67a49SFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2029dadcf809SJacob Faibussowitsch   PetscValidRealPointer(ynorm, 2);
2030c1e67a49SFande Kong   *ynorm = snes->ynorm;
20313ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2032c1e67a49SFande Kong }
2033c1e67a49SFande Kong 
2034c1e67a49SFande Kong /*@
20354591eaf2SFande Kong   SNESGetSolutionNorm - Gets the last computed norm of the solution
2036c1e67a49SFande Kong 
2037c1e67a49SFande Kong   Not Collective
2038c1e67a49SFande Kong 
2039c1e67a49SFande Kong   Input Parameter:
2040f6dfbefdSBarry Smith . snes - the `SNES` context
2041c1e67a49SFande Kong 
2042c1e67a49SFande Kong   Output Parameter:
2043c1e67a49SFande Kong . xnorm - the last computed solution norm
2044c1e67a49SFande Kong 
2045c1e67a49SFande Kong   Level: developer
2046c1e67a49SFande Kong 
20471cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetNormSchedule()`, `SNESComputeFunction()`, `SNESGetFunctionNorm()`, `SNESGetUpdateNorm()`
2048c1e67a49SFande Kong @*/
2049d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetSolutionNorm(SNES snes, PetscReal *xnorm)
2050d71ae5a4SJacob Faibussowitsch {
2051c1e67a49SFande Kong   PetscFunctionBegin;
2052c1e67a49SFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2053dadcf809SJacob Faibussowitsch   PetscValidRealPointer(xnorm, 2);
2054c1e67a49SFande Kong   *xnorm = snes->xnorm;
20553ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2056c1e67a49SFande Kong }
2057c1e67a49SFande Kong 
205847073ea2SPeter Brune /*@C
2059f6dfbefdSBarry Smith   SNESSetFunctionType - Sets the `SNESFunctionType`
2060f6dfbefdSBarry Smith   of the `SNES` method.
206147073ea2SPeter Brune 
2062c3339decSBarry Smith   Logically Collective
206347073ea2SPeter Brune 
206447073ea2SPeter Brune   Input Parameters:
2065f6dfbefdSBarry Smith + snes - the `SNES` context
2066f6dfbefdSBarry Smith - type - the function type
206747073ea2SPeter Brune 
206847073ea2SPeter Brune   Level: developer
206947073ea2SPeter Brune 
2070f6dfbefdSBarry Smith   Notes:
2071f6dfbefdSBarry Smith   Possible values of the function type
2072f6dfbefdSBarry Smith +  `SNES_FUNCTION_DEFAULT` - the default for the given `SNESType`
2073f6dfbefdSBarry Smith .  `SNES_FUNCTION_UNPRECONDITIONED` - an unpreconditioned function evaluation (this is the function provided with `SNESSetFunction()`
2074f6dfbefdSBarry Smith -  `SNES_FUNCTION_PRECONDITIONED` - a transformation of the function provided with `SNESSetFunction()`
2075f6dfbefdSBarry Smith 
2076f6dfbefdSBarry Smith   Different `SNESType`s use this value in different ways
2077f6dfbefdSBarry Smith 
20781cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESFunctionType`, `SNESGetNormSchedule()`, `SNESComputeFunction()`, `VecNorm()`, `SNESSetFunction()`, `SNESSetInitialFunction()`, `SNESNormSchedule`
207947073ea2SPeter Brune @*/
2080d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetFunctionType(SNES snes, SNESFunctionType type)
2081d71ae5a4SJacob Faibussowitsch {
208247073ea2SPeter Brune   PetscFunctionBegin;
208347073ea2SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
208447073ea2SPeter Brune   snes->functype = type;
20853ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
208647073ea2SPeter Brune }
208747073ea2SPeter Brune 
208847073ea2SPeter Brune /*@C
2089f6dfbefdSBarry Smith   SNESGetFunctionType - Gets the `SNESFunctionType` used in convergence and monitoring set with `SNESSetFunctionType()`
209047073ea2SPeter Brune   of the SNES method.
209147073ea2SPeter Brune 
2092c3339decSBarry Smith   Logically Collective
209347073ea2SPeter Brune 
209447073ea2SPeter Brune   Input Parameters:
2095f6dfbefdSBarry Smith + snes - the `SNES` context
2096f6dfbefdSBarry Smith - type - the type of the function evaluation, see `SNESSetFunctionType()`
209747073ea2SPeter Brune 
209847073ea2SPeter Brune   Level: advanced
209947073ea2SPeter Brune 
21001cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetFunctionType()`, `SNESFunctionType`, `SNESSetNormSchedule()`, `SNESComputeFunction()`, `VecNorm()`, `SNESSetFunction()`, `SNESSetInitialFunction()`, `SNESNormSchedule`
210147073ea2SPeter Brune @*/
2102d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetFunctionType(SNES snes, SNESFunctionType *type)
2103d71ae5a4SJacob Faibussowitsch {
210447073ea2SPeter Brune   PetscFunctionBegin;
210547073ea2SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
210647073ea2SPeter Brune   *type = snes->functype;
21073ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2108534ebe21SPeter Brune }
2109534ebe21SPeter Brune 
2110c79ef259SPeter Brune /*@C
2111be95d8f1SBarry Smith   SNESSetNGS - Sets the user nonlinear Gauss-Seidel routine for
2112c79ef259SPeter Brune   use with composed nonlinear solvers.
2113c79ef259SPeter Brune 
2114c79ef259SPeter Brune   Input Parameters:
2115dc4c0fb0SBarry Smith + snes - the `SNES` context
211637fdd005SBarry Smith . f    - function evaluation routine to apply Gauss-Seidel
2117c79ef259SPeter Brune - ctx  - [optional] user-defined context for private data for the
2118dc4c0fb0SBarry Smith             smoother evaluation routine (may be `NULL`)
2119c79ef259SPeter Brune 
212020f4b53cSBarry Smith   Calling sequence of `f`:
212120f4b53cSBarry Smith $  PetscErrorCode f(SNES snes, Vec X, Vec B, void *ctx)
2122f6dfbefdSBarry Smith + snes - the `SNES` context
2123f6dfbefdSBarry Smith .  X - the current solution
2124dc4c0fb0SBarry Smith .  B - the right hand side vector (which may be `NULL`)
2125f6dfbefdSBarry Smith - ctx  - a user provided context
2126f6dfbefdSBarry Smith 
2127dc4c0fb0SBarry Smith   Level: intermediate
2128dc4c0fb0SBarry Smith 
2129f6dfbefdSBarry Smith   Note:
2130f6dfbefdSBarry Smith   The `SNESNGS` routines are used by the composed nonlinear solver to generate
2131f6dfbefdSBarry Smith   a problem appropriate update to the solution, particularly `SNESFAS`.
2132c79ef259SPeter Brune 
21331cc06b55SBarry Smith .seealso: [](ch_snes), `SNESGetNGS()`, `SNESNCG`, `SNESGetFunction()`, `SNESComputeNGS()`
2134c79ef259SPeter Brune @*/
2135d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetNGS(SNES snes, PetscErrorCode (*f)(SNES, Vec, Vec, void *), void *ctx)
2136d71ae5a4SJacob Faibussowitsch {
21376cab3a1bSJed Brown   DM dm;
21386cab3a1bSJed Brown 
2139646217ecSPeter Brune   PetscFunctionBegin;
21406cab3a1bSJed Brown   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
21419566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
21429566063dSJacob Faibussowitsch   PetscCall(DMSNESSetNGS(dm, f, ctx));
21433ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2144646217ecSPeter Brune }
2145646217ecSPeter Brune 
2146bbc1464cSBarry Smith /*
2147bbc1464cSBarry Smith      This is used for -snes_mf_operator; it uses a duplicate of snes->jacobian_pre because snes->jacobian_pre cannot be
2148bbc1464cSBarry Smith    changed during the KSPSolve()
2149bbc1464cSBarry Smith */
2150d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESPicardComputeMFFunction(SNES snes, Vec x, Vec f, void *ctx)
2151d71ae5a4SJacob Faibussowitsch {
2152bbc1464cSBarry Smith   DM     dm;
2153bbc1464cSBarry Smith   DMSNES sdm;
2154bbc1464cSBarry Smith 
2155bbc1464cSBarry Smith   PetscFunctionBegin;
21569566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
21579566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &sdm));
2158bbc1464cSBarry Smith   /*  A(x)*x - b(x) */
2159bbc1464cSBarry Smith   if (sdm->ops->computepfunction) {
2160792fecdfSBarry Smith     PetscCallBack("SNES Picard callback function", (*sdm->ops->computepfunction)(snes, x, f, sdm->pctx));
21619566063dSJacob Faibussowitsch     PetscCall(VecScale(f, -1.0));
21620df40c35SBarry Smith     /* Cannot share nonzero pattern because of the possible use of SNESComputeJacobianDefault() */
2163ef1023bdSBarry Smith     if (!snes->picard) PetscCall(MatDuplicate(snes->jacobian_pre, MAT_DO_NOT_COPY_VALUES, &snes->picard));
2164792fecdfSBarry Smith     PetscCallBack("SNES Picard callback Jacobian", (*sdm->ops->computepjacobian)(snes, x, snes->picard, snes->picard, sdm->pctx));
21659566063dSJacob Faibussowitsch     PetscCall(MatMultAdd(snes->picard, x, f, f));
2166bbc1464cSBarry Smith   } else {
2167792fecdfSBarry Smith     PetscCallBack("SNES Picard callback Jacobian", (*sdm->ops->computepjacobian)(snes, x, snes->picard, snes->picard, sdm->pctx));
21689566063dSJacob Faibussowitsch     PetscCall(MatMult(snes->picard, x, f));
2169bbc1464cSBarry Smith   }
21703ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2171bbc1464cSBarry Smith }
2172bbc1464cSBarry Smith 
2173d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESPicardComputeFunction(SNES snes, Vec x, Vec f, void *ctx)
2174d71ae5a4SJacob Faibussowitsch {
2175e03ab78fSPeter Brune   DM     dm;
2176942e3340SBarry Smith   DMSNES sdm;
21776cab3a1bSJed Brown 
21788b0a5094SBarry Smith   PetscFunctionBegin;
21799566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
21809566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &sdm));
21818b0a5094SBarry Smith   /*  A(x)*x - b(x) */
2182bbc1464cSBarry Smith   if (sdm->ops->computepfunction) {
2183792fecdfSBarry Smith     PetscCallBack("SNES Picard callback function", (*sdm->ops->computepfunction)(snes, x, f, sdm->pctx));
21849566063dSJacob Faibussowitsch     PetscCall(VecScale(f, -1.0));
2185792fecdfSBarry Smith     PetscCallBack("SNES Picard callback Jacobian", (*sdm->ops->computepjacobian)(snes, x, snes->jacobian, snes->jacobian_pre, sdm->pctx));
21869566063dSJacob Faibussowitsch     PetscCall(MatMultAdd(snes->jacobian_pre, x, f, f));
2187bbc1464cSBarry Smith   } else {
2188792fecdfSBarry Smith     PetscCallBack("SNES Picard callback Jacobian", (*sdm->ops->computepjacobian)(snes, x, snes->jacobian, snes->jacobian_pre, sdm->pctx));
21899566063dSJacob Faibussowitsch     PetscCall(MatMult(snes->jacobian_pre, x, f));
2190bbc1464cSBarry Smith   }
21913ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
21928b0a5094SBarry Smith }
21938b0a5094SBarry Smith 
2194d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESPicardComputeJacobian(SNES snes, Vec x1, Mat J, Mat B, void *ctx)
2195d71ae5a4SJacob Faibussowitsch {
21968b0a5094SBarry Smith   PetscFunctionBegin;
2197e03ab78fSPeter Brune   /* the jacobian matrix should be pre-filled in SNESPicardComputeFunction */
2198bbc1464cSBarry Smith   /* must assembly if matrix-free to get the last SNES solution */
21999566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(J, MAT_FINAL_ASSEMBLY));
22009566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(J, MAT_FINAL_ASSEMBLY));
22013ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
22028b0a5094SBarry Smith }
22038b0a5094SBarry Smith 
22048b0a5094SBarry Smith /*@C
2205f6dfbefdSBarry Smith   SNESSetPicard - Use `SNES` to solve the system A(x) x = bp(x) + b via a Picard type iteration (Picard linearization)
22068b0a5094SBarry Smith 
2207c3339decSBarry Smith   Logically Collective
22088b0a5094SBarry Smith 
22098b0a5094SBarry Smith   Input Parameters:
2210f6dfbefdSBarry Smith + snes - the `SNES` context
2211dc4c0fb0SBarry Smith . r    - vector to store function values, may be `NULL`
2212dc4c0fb0SBarry Smith . bp   - function evaluation routine, may be `NULL`
22136b7fb656SBarry Smith . Amat - matrix with which A(x) x - bp(x) - b is to be computed
2214dc4c0fb0SBarry Smith . Pmat - matrix from which preconditioner is computed (usually the same as `Amat`)
221520f4b53cSBarry Smith . J    - function to compute matrix values, for the calling sequence see `SNESJacobianFunction()`
2216dc4c0fb0SBarry Smith - ctx  - [optional] user-defined context for private data for the function evaluation routine (may be `NULL`)
2217dc4c0fb0SBarry Smith 
2218dc4c0fb0SBarry Smith   Level: intermediate
22198b0a5094SBarry Smith 
22208b0a5094SBarry Smith   Notes:
22216b7fb656SBarry Smith   It is often better to provide the nonlinear function F() and some approximation to its Jacobian directly and use
2222f450aa47SBarry Smith   an approximate Newton solver. This interface is provided to allow porting/testing a previous Picard based code in PETSc before converting it to approximate Newton.
2223f450aa47SBarry Smith 
2224f6dfbefdSBarry Smith   One can call `SNESSetPicard()` or `SNESSetFunction()` (and possibly `SNESSetJacobian()`) but cannot call both
22258b0a5094SBarry Smith 
2226dc4c0fb0SBarry Smith   Solves the equation A(x) x = bp(x) - b via the defect correction algorithm A(x^{n}) (x^{n+1} - x^{n}) = bp(x^{n}) + b - A(x^{n})x^{n}.
2227dc4c0fb0SBarry Smith   When an exact solver is used this corresponds to the "classic" Picard A(x^{n}) x^{n+1} = bp(x^{n}) + b iteration.
22288b0a5094SBarry Smith 
2229dc4c0fb0SBarry Smith   Run with `-snes_mf_operator` to solve the system with Newton's method using A(x^{n}) to construct the preconditioner.
22308b0a5094SBarry Smith 
22310d04baf8SBarry Smith   We implement the defect correction form of the Picard iteration because it converges much more generally when inexact linear solvers are used then
22326b7fb656SBarry Smith   the direct Picard iteration A(x^n) x^{n+1} = bp(x^n) + b
22338b0a5094SBarry Smith 
22348b0a5094SBarry Smith   There is some controversity over the definition of a Picard iteration for nonlinear systems but almost everyone agrees that it involves a linear solve and some
22358b0a5094SBarry Smith   believe it is the iteration  A(x^{n}) x^{n+1} = b(x^{n}) hence we use the name Picard. If anyone has an authoritative  reference that defines the Picard iteration
22368b0a5094SBarry Smith   different please contact us at petsc-dev@mcs.anl.gov and we'll have an entirely new argument :-).
22378b0a5094SBarry Smith 
2238dc4c0fb0SBarry Smith   When used with `-snes_mf_operator` this will run matrix-free Newton's method where the matrix-vector product is of the true Jacobian of A(x)x - bp(x) -b and
2239f6dfbefdSBarry Smith   A(x^{n}) is used to build the preconditioner
22406b7fb656SBarry Smith 
2241dc4c0fb0SBarry Smith   When used with `-snes_fd` this will compute the true Jacobian (very slowly one column at at time) and thus represent Newton's method.
22426b7fb656SBarry Smith 
2243dc4c0fb0SBarry Smith   When used with `-snes_fd_coloring` this will compute the Jacobian via coloring and thus represent a faster implementation of Newton's method. But the
22446b7fb656SBarry Smith   the nonzero structure of the Jacobian is, in general larger than that of the Picard matrix A so you must provide in A the needed nonzero structure for the correct
2245f6dfbefdSBarry Smith   coloring. When using `DMDA` this may mean creating the matrix A with `DMCreateMatrix()` using a wider stencil than strictly needed for A or with a `DMDA_STENCIL_BOX`.
2246aaa8cc7dSPierre Jolivet   See the comment in src/snes/tutorials/ex15.c.
2247bbc1464cSBarry Smith 
22481cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetFunction()`, `SNESSetFunction()`, `SNESComputeFunction()`, `SNESSetJacobian()`, `SNESGetPicard()`, `SNESLineSearchPreCheckPicard()`, `SNESJacobianFunction`
22498b0a5094SBarry Smith @*/
2250d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetPicard(SNES snes, Vec r, PetscErrorCode (*bp)(SNES, Vec, Vec, void *), Mat Amat, Mat Pmat, PetscErrorCode (*J)(SNES, Vec, Mat, Mat, void *), void *ctx)
2251d71ae5a4SJacob Faibussowitsch {
2252e03ab78fSPeter Brune   DM dm;
2253e03ab78fSPeter Brune 
22548b0a5094SBarry Smith   PetscFunctionBegin;
22558b0a5094SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
22569566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
22579566063dSJacob Faibussowitsch   PetscCall(DMSNESSetPicard(dm, bp, J, ctx));
22589566063dSJacob Faibussowitsch   PetscCall(DMSNESSetMFFunction(dm, SNESPicardComputeMFFunction, ctx));
22599566063dSJacob Faibussowitsch   PetscCall(SNESSetFunction(snes, r, SNESPicardComputeFunction, ctx));
22609566063dSJacob Faibussowitsch   PetscCall(SNESSetJacobian(snes, Amat, Pmat, SNESPicardComputeJacobian, ctx));
22613ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
22628b0a5094SBarry Smith }
22638b0a5094SBarry Smith 
22647971a8bfSPeter Brune /*@C
22657971a8bfSPeter Brune   SNESGetPicard - Returns the context for the Picard iteration
22667971a8bfSPeter Brune 
2267f6dfbefdSBarry Smith   Not Collective, but `Vec` is parallel if `SNES` is parallel. Collective if `Vec` is requested, but has not been created yet.
22687971a8bfSPeter Brune 
22697971a8bfSPeter Brune   Input Parameter:
2270f6dfbefdSBarry Smith . snes - the `SNES` context
22717971a8bfSPeter Brune 
2272d8d19677SJose E. Roman   Output Parameters:
2273dc4c0fb0SBarry Smith + r    - the function (or `NULL`)
227420f4b53cSBarry Smith . f    - the function (or `NULL`);  for calling sequence see `SNESFunction`
2275dc4c0fb0SBarry Smith . Amat - the matrix used to defined the operation A(x) x - b(x) (or `NULL`)
2276dc4c0fb0SBarry Smith . Pmat - the matrix from which the preconditioner will be constructed (or `NULL`)
227720f4b53cSBarry Smith . J    - the function for matrix evaluation (or `NULL`);  for calling sequence see `SNESJacobianFunction`
2278dc4c0fb0SBarry Smith - ctx  - the function context (or `NULL`)
22797971a8bfSPeter Brune 
22807971a8bfSPeter Brune   Level: advanced
22817971a8bfSPeter Brune 
22821cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetFunction()`, `SNESSetPicard()`, `SNESGetFunction()`, `SNESGetJacobian()`, `SNESGetDM()`, `SNESFunction`, `SNESJacobianFunction`
22837971a8bfSPeter Brune @*/
2284d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetPicard(SNES snes, Vec *r, PetscErrorCode (**f)(SNES, Vec, Vec, void *), Mat *Amat, Mat *Pmat, PetscErrorCode (**J)(SNES, Vec, Mat, Mat, void *), void **ctx)
2285d71ae5a4SJacob Faibussowitsch {
22867971a8bfSPeter Brune   DM dm;
22877971a8bfSPeter Brune 
22887971a8bfSPeter Brune   PetscFunctionBegin;
22897971a8bfSPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
22909566063dSJacob Faibussowitsch   PetscCall(SNESGetFunction(snes, r, NULL, NULL));
22919566063dSJacob Faibussowitsch   PetscCall(SNESGetJacobian(snes, Amat, Pmat, NULL, NULL));
22929566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
22939566063dSJacob Faibussowitsch   PetscCall(DMSNESGetPicard(dm, f, J, ctx));
22943ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
22957971a8bfSPeter Brune }
22967971a8bfSPeter Brune 
2297d25893d9SBarry Smith /*@C
2298dc4c0fb0SBarry Smith   SNESSetComputeInitialGuess - Sets a routine used to compute an initial guess for the nonlinear problem
2299d25893d9SBarry Smith 
2300c3339decSBarry Smith   Logically Collective
2301d25893d9SBarry Smith 
2302d25893d9SBarry Smith   Input Parameters:
2303f6dfbefdSBarry Smith + snes - the `SNES` context
2304d25893d9SBarry Smith . func - function evaluation routine
2305d25893d9SBarry Smith - ctx  - [optional] user-defined context for private data for the
2306dc4c0fb0SBarry Smith          function evaluation routine (may be `NULL`)
2307d25893d9SBarry Smith 
230820f4b53cSBarry Smith   Calling sequence of `func`:
230920f4b53cSBarry Smith $    PetscErrorCode func(SNES snes, Vec x, void *ctx);
231020f4b53cSBarry Smith + snes - the `SNES` solver
231120f4b53cSBarry Smith .  x - vector to put initial guess
2312d25893d9SBarry Smith - ctx  - optional user-defined function context
2313d25893d9SBarry Smith 
2314d25893d9SBarry Smith   Level: intermediate
2315d25893d9SBarry Smith 
23161cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESGetFunction()`, `SNESComputeFunction()`, `SNESSetJacobian()`
2317d25893d9SBarry Smith @*/
2318d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetComputeInitialGuess(SNES snes, PetscErrorCode (*func)(SNES, Vec, void *), void *ctx)
2319d71ae5a4SJacob Faibussowitsch {
2320d25893d9SBarry Smith   PetscFunctionBegin;
2321d25893d9SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2322d25893d9SBarry Smith   if (func) snes->ops->computeinitialguess = func;
2323d25893d9SBarry Smith   if (ctx) snes->initialguessP = ctx;
23243ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2325d25893d9SBarry Smith }
2326d25893d9SBarry Smith 
23271096aae1SMatthew Knepley /*@C
2328dc4c0fb0SBarry Smith   SNESGetRhs - Gets the vector for solving F(x) = `rhs`. If `rhs` is not set
23291096aae1SMatthew Knepley   it assumes a zero right hand side.
23301096aae1SMatthew Knepley 
2331c3339decSBarry Smith   Logically Collective
23321096aae1SMatthew Knepley 
23331096aae1SMatthew Knepley   Input Parameter:
2334f6dfbefdSBarry Smith . snes - the `SNES` context
23351096aae1SMatthew Knepley 
23361096aae1SMatthew Knepley   Output Parameter:
2337dc4c0fb0SBarry Smith . rhs - the right hand side vector or `NULL` if the right hand side vector is null
23381096aae1SMatthew Knepley 
23391096aae1SMatthew Knepley   Level: intermediate
23401096aae1SMatthew Knepley 
23411cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetSolution()`, `SNESGetFunction()`, `SNESComputeFunction()`, `SNESSetJacobian()`, `SNESSetFunction()`
23421096aae1SMatthew Knepley @*/
2343d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetRhs(SNES snes, Vec *rhs)
2344d71ae5a4SJacob Faibussowitsch {
23451096aae1SMatthew Knepley   PetscFunctionBegin;
23460700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
23471096aae1SMatthew Knepley   PetscValidPointer(rhs, 2);
234885385478SLisandro Dalcin   *rhs = snes->vec_rhs;
23493ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
23501096aae1SMatthew Knepley }
23511096aae1SMatthew Knepley 
23529b94acceSBarry Smith /*@
2353f6dfbefdSBarry Smith   SNESComputeFunction - Calls the function that has been set with `SNESSetFunction()`.
23549b94acceSBarry Smith 
2355c3339decSBarry Smith   Collective
2356c7afd0dbSLois Curfman McInnes 
23579b94acceSBarry Smith   Input Parameters:
2358f6dfbefdSBarry Smith + snes - the `SNES` context
2359c7afd0dbSLois Curfman McInnes - x    - input vector
23609b94acceSBarry Smith 
23619b94acceSBarry Smith   Output Parameter:
2362f6dfbefdSBarry Smith . y - function vector, as set by `SNESSetFunction()`
23639b94acceSBarry Smith 
2364dc4c0fb0SBarry Smith   Level: developer
2365dc4c0fb0SBarry Smith 
2366f6dfbefdSBarry Smith   Note:
2367f6dfbefdSBarry Smith   `SNESComputeFunction()` is typically used within nonlinear solvers
2368bbc1464cSBarry Smith   implementations, so users would not generally call this routine themselves.
236936851e7fSLois Curfman McInnes 
23701cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetFunction()`, `SNESGetFunction()`, `SNESComputeMFFunction()`
23719b94acceSBarry Smith @*/
2372d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESComputeFunction(SNES snes, Vec x, Vec y)
2373d71ae5a4SJacob Faibussowitsch {
23746cab3a1bSJed Brown   DM     dm;
2375942e3340SBarry Smith   DMSNES sdm;
23769b94acceSBarry Smith 
23773a40ed3dSBarry Smith   PetscFunctionBegin;
23780700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
23790700a824SBarry Smith   PetscValidHeaderSpecific(x, VEC_CLASSID, 2);
23800700a824SBarry Smith   PetscValidHeaderSpecific(y, VEC_CLASSID, 3);
2381c9780b6fSBarry Smith   PetscCheckSameComm(snes, 1, x, 2);
2382c9780b6fSBarry Smith   PetscCheckSameComm(snes, 1, y, 3);
2383e0f629ddSJacob Faibussowitsch   PetscCall(VecValidValues_Internal(x, 2, PETSC_TRUE));
2384184914b5SBarry Smith 
23859566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
23869566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &sdm));
23870fdf79fbSJacob Faibussowitsch   PetscCheck(sdm->ops->computefunction || snes->vec_rhs, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Must call SNESSetFunction() or SNESSetDM() before SNESComputeFunction(), likely called from SNESSolve().");
238832f3f7c2SPeter Brune   if (sdm->ops->computefunction) {
238948a46eb9SPierre Jolivet     if (sdm->ops->computefunction != SNESObjectiveComputeFunctionDefaultFD) PetscCall(PetscLogEventBegin(SNES_FunctionEval, snes, x, y, 0));
23909566063dSJacob Faibussowitsch     PetscCall(VecLockReadPush(x));
23918ddeebeaSSteve Benbow     /* ensure domainerror is false prior to computefunction evaluation (may not have been reset) */
23928ddeebeaSSteve Benbow     snes->domainerror = PETSC_FALSE;
2393800f99ffSJeremy L Thompson     {
2394800f99ffSJeremy L Thompson       void *ctx;
2395800f99ffSJeremy L Thompson       PetscErrorCode (*computefunction)(SNES, Vec, Vec, void *);
2396800f99ffSJeremy L Thompson       PetscCall(DMSNESGetFunction(dm, &computefunction, &ctx));
2397800f99ffSJeremy L Thompson       PetscCallBack("SNES callback function", (*computefunction)(snes, x, y, ctx));
2398800f99ffSJeremy L Thompson     }
23999566063dSJacob Faibussowitsch     PetscCall(VecLockReadPop(x));
240048a46eb9SPierre Jolivet     if (sdm->ops->computefunction != SNESObjectiveComputeFunctionDefaultFD) PetscCall(PetscLogEventEnd(SNES_FunctionEval, snes, x, y, 0));
24010fdf79fbSJacob Faibussowitsch   } else /* if (snes->vec_rhs) */ {
24029566063dSJacob Faibussowitsch     PetscCall(MatMult(snes->jacobian, x, y));
24030fdf79fbSJacob Faibussowitsch   }
24041baa6e33SBarry Smith   if (snes->vec_rhs) PetscCall(VecAXPY(y, -1.0, snes->vec_rhs));
2405ae3c334cSLois Curfman McInnes   snes->nfuncs++;
2406422a814eSBarry Smith   /*
2407422a814eSBarry Smith      domainerror might not be set on all processes; so we tag vector locally with Inf and the next inner product or norm will
2408422a814eSBarry Smith      propagate the value to all processes
2409422a814eSBarry Smith   */
24101baa6e33SBarry Smith   if (snes->domainerror) PetscCall(VecSetInf(y));
24113ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
24129b94acceSBarry Smith }
24139b94acceSBarry Smith 
2414c79ef259SPeter Brune /*@
2415f6dfbefdSBarry Smith   SNESComputeMFFunction - Calls the function that has been set with `SNESSetMFFunction()`.
2416bbc1464cSBarry Smith 
2417c3339decSBarry Smith   Collective
2418bbc1464cSBarry Smith 
2419bbc1464cSBarry Smith   Input Parameters:
2420f6dfbefdSBarry Smith + snes - the `SNES` context
2421bbc1464cSBarry Smith - x    - input vector
2422bbc1464cSBarry Smith 
2423bbc1464cSBarry Smith   Output Parameter:
2424f6dfbefdSBarry Smith . y - function vector, as set by `SNESSetMFFunction()`
2425bbc1464cSBarry Smith 
2426dc4c0fb0SBarry Smith   Level: developer
2427dc4c0fb0SBarry Smith 
2428bbc1464cSBarry Smith   Notes:
2429f6dfbefdSBarry Smith   `SNESComputeMFFunction()` is used within the matrix vector products called by the matrix created with `MatCreateSNESMF()`
2430bbc1464cSBarry Smith   so users would not generally call this routine themselves.
2431bbc1464cSBarry Smith 
2432f6dfbefdSBarry Smith   Since this function is intended for use with finite differencing it does not subtract the right hand side vector provided with `SNESSolve()`
2433f6dfbefdSBarry Smith   while `SNESComputeFunction()` does. As such, this routine cannot be used with  `MatMFFDSetBase()` with a provided F function value even if it applies the
2434f6dfbefdSBarry Smith   same function as `SNESComputeFunction()` if a `SNESSolve()` right hand side vector is use because the two functions difference would include this right hand side function.
2435bbc1464cSBarry Smith 
24361cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetFunction()`, `SNESGetFunction()`, `SNESComputeFunction()`, `MatCreateSNESMF`
2437bbc1464cSBarry Smith @*/
2438d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESComputeMFFunction(SNES snes, Vec x, Vec y)
2439d71ae5a4SJacob Faibussowitsch {
2440bbc1464cSBarry Smith   DM     dm;
2441bbc1464cSBarry Smith   DMSNES sdm;
2442bbc1464cSBarry Smith 
2443bbc1464cSBarry Smith   PetscFunctionBegin;
2444bbc1464cSBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2445bbc1464cSBarry Smith   PetscValidHeaderSpecific(x, VEC_CLASSID, 2);
2446bbc1464cSBarry Smith   PetscValidHeaderSpecific(y, VEC_CLASSID, 3);
2447bbc1464cSBarry Smith   PetscCheckSameComm(snes, 1, x, 2);
2448bbc1464cSBarry Smith   PetscCheckSameComm(snes, 1, y, 3);
2449e0f629ddSJacob Faibussowitsch   PetscCall(VecValidValues_Internal(x, 2, PETSC_TRUE));
2450bbc1464cSBarry Smith 
24519566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
24529566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &sdm));
24539566063dSJacob Faibussowitsch   PetscCall(PetscLogEventBegin(SNES_FunctionEval, snes, x, y, 0));
24549566063dSJacob Faibussowitsch   PetscCall(VecLockReadPush(x));
2455bbc1464cSBarry Smith   /* ensure domainerror is false prior to computefunction evaluation (may not have been reset) */
2456bbc1464cSBarry Smith   snes->domainerror = PETSC_FALSE;
2457792fecdfSBarry Smith   PetscCallBack("SNES callback function", (*sdm->ops->computemffunction)(snes, x, y, sdm->mffunctionctx));
24589566063dSJacob Faibussowitsch   PetscCall(VecLockReadPop(x));
24599566063dSJacob Faibussowitsch   PetscCall(PetscLogEventEnd(SNES_FunctionEval, snes, x, y, 0));
2460bbc1464cSBarry Smith   snes->nfuncs++;
2461bbc1464cSBarry Smith   /*
2462bbc1464cSBarry Smith      domainerror might not be set on all processes; so we tag vector locally with Inf and the next inner product or norm will
2463bbc1464cSBarry Smith      propagate the value to all processes
2464bbc1464cSBarry Smith   */
24651baa6e33SBarry Smith   if (snes->domainerror) PetscCall(VecSetInf(y));
24663ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2467bbc1464cSBarry Smith }
2468bbc1464cSBarry Smith 
2469bbc1464cSBarry Smith /*@
2470f6dfbefdSBarry Smith   SNESComputeNGS - Calls the Gauss-Seidel function that has been set with  `SNESSetNGS()`.
2471c79ef259SPeter Brune 
2472c3339decSBarry Smith   Collective
2473c79ef259SPeter Brune 
2474c79ef259SPeter Brune   Input Parameters:
2475f6dfbefdSBarry Smith + snes - the `SNES` context
2476c79ef259SPeter Brune . x    - input vector
2477c79ef259SPeter Brune - b    - rhs vector
2478c79ef259SPeter Brune 
2479c79ef259SPeter Brune   Output Parameter:
2480c79ef259SPeter Brune . x - new solution vector
2481c79ef259SPeter Brune 
2482dc4c0fb0SBarry Smith   Level: developer
2483dc4c0fb0SBarry Smith 
2484f6dfbefdSBarry Smith   Note:
2485f6dfbefdSBarry Smith   `SNESComputeNGS()` is typically used within composed nonlinear solver
2486c79ef259SPeter Brune   implementations, so most users would not generally call this routine
2487c79ef259SPeter Brune   themselves.
2488c79ef259SPeter Brune 
24891cc06b55SBarry Smith .seealso: [](ch_snes), `SNESNGS`, `SNESSetNGS()`, `SNESComputeFunction()`
2490c79ef259SPeter Brune @*/
2491d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESComputeNGS(SNES snes, Vec b, Vec x)
2492d71ae5a4SJacob Faibussowitsch {
24936cab3a1bSJed Brown   DM     dm;
2494942e3340SBarry Smith   DMSNES sdm;
2495646217ecSPeter Brune 
2496646217ecSPeter Brune   PetscFunctionBegin;
2497646217ecSPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2498064a246eSJacob Faibussowitsch   PetscValidHeaderSpecific(x, VEC_CLASSID, 3);
2499064a246eSJacob Faibussowitsch   if (b) PetscValidHeaderSpecific(b, VEC_CLASSID, 2);
2500064a246eSJacob Faibussowitsch   PetscCheckSameComm(snes, 1, x, 3);
2501064a246eSJacob Faibussowitsch   if (b) PetscCheckSameComm(snes, 1, b, 2);
2502e0f629ddSJacob Faibussowitsch   if (b) PetscCall(VecValidValues_Internal(b, 2, PETSC_TRUE));
25039566063dSJacob Faibussowitsch   PetscCall(PetscLogEventBegin(SNES_NGSEval, snes, x, b, 0));
25049566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
25059566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &sdm));
25060fdf79fbSJacob Faibussowitsch   PetscCheck(sdm->ops->computegs, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Must call SNESSetNGS() before SNESComputeNGS(), likely called from SNESSolve().");
25079566063dSJacob Faibussowitsch   if (b) PetscCall(VecLockReadPush(b));
2508792fecdfSBarry Smith   PetscCallBack("SNES callback NGS", (*sdm->ops->computegs)(snes, x, b, sdm->gsctx));
25099566063dSJacob Faibussowitsch   if (b) PetscCall(VecLockReadPop(b));
25109566063dSJacob Faibussowitsch   PetscCall(PetscLogEventEnd(SNES_NGSEval, snes, x, b, 0));
25113ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2512646217ecSPeter Brune }
2513646217ecSPeter Brune 
2514d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESTestJacobian(SNES snes)
2515d71ae5a4SJacob Faibussowitsch {
251612837594SBarry Smith   Mat               A, B, C, D, jacobian;
2517e885f1abSBarry Smith   Vec               x = snes->vec_sol, f = snes->vec_func;
2518e885f1abSBarry Smith   PetscReal         nrm, gnorm;
251981e7118cSBarry Smith   PetscReal         threshold = 1.e-5;
25200e276705SLisandro Dalcin   MatType           mattype;
2521e885f1abSBarry Smith   PetscInt          m, n, M, N;
2522e885f1abSBarry Smith   void             *functx;
25232cd624f9SStefano Zampini   PetscBool         complete_print = PETSC_FALSE, threshold_print = PETSC_FALSE, test = PETSC_FALSE, flg, istranspose;
25243325ff46SBarry Smith   PetscViewer       viewer, mviewer;
2525e885f1abSBarry Smith   MPI_Comm          comm;
2526e885f1abSBarry Smith   PetscInt          tabs;
252712837594SBarry Smith   static PetscBool  directionsprinted = PETSC_FALSE;
25283325ff46SBarry Smith   PetscViewerFormat format;
2529e885f1abSBarry Smith 
2530e885f1abSBarry Smith   PetscFunctionBegin;
2531d0609cedSBarry Smith   PetscObjectOptionsBegin((PetscObject)snes);
25329566063dSJacob Faibussowitsch   PetscCall(PetscOptionsName("-snes_test_jacobian", "Compare hand-coded and finite difference Jacobians", "None", &test));
25339566063dSJacob Faibussowitsch   PetscCall(PetscOptionsReal("-snes_test_jacobian", "Threshold for element difference between hand-coded and finite difference being meaningful", "None", threshold, &threshold, NULL));
25349566063dSJacob Faibussowitsch   PetscCall(PetscOptionsDeprecated("-snes_test_jacobian_display", "-snes_test_jacobian_view", "3.13", NULL));
25354ead3382SBarry Smith   PetscCall(PetscOptionsViewer("-snes_test_jacobian_view", "View difference between hand-coded and finite difference Jacobians element entries", "None", &mviewer, &format, &complete_print));
25369566063dSJacob Faibussowitsch   PetscCall(PetscOptionsDeprecated("-snes_test_jacobian_display_threshold", "-snes_test_jacobian", "3.13", "-snes_test_jacobian accepts an optional threshold (since v3.10)"));
25374ead3382SBarry Smith   /* Cannot remove the what otherwise would be redundant call to (PetscOptionsReal("-snes_test_jacobian_display_threshold") below because its usage is different than the replacement usage */
25389566063dSJacob Faibussowitsch   PetscCall(PetscOptionsReal("-snes_test_jacobian_display_threshold", "Display difference between hand-coded and finite difference Jacobians which exceed input threshold", "None", threshold, &threshold, &threshold_print));
2539d0609cedSBarry Smith   PetscOptionsEnd();
25403ba16761SJacob Faibussowitsch   if (!test) PetscFunctionReturn(PETSC_SUCCESS);
2541e885f1abSBarry Smith 
25429566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)snes, &comm));
25439566063dSJacob Faibussowitsch   PetscCall(PetscViewerASCIIGetStdout(comm, &viewer));
25449566063dSJacob Faibussowitsch   PetscCall(PetscViewerASCIIGetTab(viewer, &tabs));
25459566063dSJacob Faibussowitsch   PetscCall(PetscViewerASCIISetTab(viewer, ((PetscObject)snes)->tablevel));
25469566063dSJacob Faibussowitsch   PetscCall(PetscViewerASCIIPrintf(viewer, "  ---------- Testing Jacobian -------------\n"));
254712837594SBarry Smith   if (!complete_print && !directionsprinted) {
25489566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "  Run with -snes_test_jacobian_view and optionally -snes_test_jacobian <threshold> to show difference\n"));
25499566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "    of hand-coded and finite difference Jacobian entries greater than <threshold>.\n"));
255012837594SBarry Smith   }
255112837594SBarry Smith   if (!directionsprinted) {
25529566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "  Testing hand-coded Jacobian, if (for double precision runs) ||J - Jfd||_F/||J||_F is\n"));
25539566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "    O(1.e-8), the hand-coded Jacobian is probably correct.\n"));
255412837594SBarry Smith     directionsprinted = PETSC_TRUE;
2555e885f1abSBarry Smith   }
25561baa6e33SBarry Smith   if (complete_print) PetscCall(PetscViewerPushFormat(mviewer, format));
2557e885f1abSBarry Smith 
25589566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)snes->jacobian, MATMFFD, &flg));
255912837594SBarry Smith   if (!flg) jacobian = snes->jacobian;
256012837594SBarry Smith   else jacobian = snes->jacobian_pre;
256112837594SBarry Smith 
2562a82339d0SMatthew G. Knepley   if (!x) {
25639566063dSJacob Faibussowitsch     PetscCall(MatCreateVecs(jacobian, &x, NULL));
2564a82339d0SMatthew G. Knepley   } else {
25659566063dSJacob Faibussowitsch     PetscCall(PetscObjectReference((PetscObject)x));
2566a82339d0SMatthew G. Knepley   }
2567a82339d0SMatthew G. Knepley   if (!f) {
25689566063dSJacob Faibussowitsch     PetscCall(VecDuplicate(x, &f));
2569a82339d0SMatthew G. Knepley   } else {
25709566063dSJacob Faibussowitsch     PetscCall(PetscObjectReference((PetscObject)f));
2571a82339d0SMatthew G. Knepley   }
2572a82339d0SMatthew G. Knepley   /* evaluate the function at this point because SNESComputeJacobianDefault() assumes that the function has been evaluated and put into snes->vec_func */
25739566063dSJacob Faibussowitsch   PetscCall(SNESComputeFunction(snes, x, f));
25749566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&f));
25759566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)snes, SNESKSPTRANSPOSEONLY, &istranspose));
257612837594SBarry Smith   while (jacobian) {
25772cd624f9SStefano Zampini     Mat JT = NULL, Jsave = NULL;
25782cd624f9SStefano Zampini 
25792cd624f9SStefano Zampini     if (istranspose) {
25809566063dSJacob Faibussowitsch       PetscCall(MatCreateTranspose(jacobian, &JT));
25812cd624f9SStefano Zampini       Jsave    = jacobian;
25822cd624f9SStefano Zampini       jacobian = JT;
25832cd624f9SStefano Zampini     }
25849566063dSJacob Faibussowitsch     PetscCall(PetscObjectBaseTypeCompareAny((PetscObject)jacobian, &flg, MATSEQAIJ, MATMPIAIJ, MATSEQDENSE, MATMPIDENSE, MATSEQBAIJ, MATMPIBAIJ, MATSEQSBAIJ, MATMPISBAIJ, ""));
258512837594SBarry Smith     if (flg) {
258612837594SBarry Smith       A = jacobian;
25879566063dSJacob Faibussowitsch       PetscCall(PetscObjectReference((PetscObject)A));
258812837594SBarry Smith     } else {
25899566063dSJacob Faibussowitsch       PetscCall(MatComputeOperator(jacobian, MATAIJ, &A));
259012837594SBarry Smith     }
2591e885f1abSBarry Smith 
25929566063dSJacob Faibussowitsch     PetscCall(MatGetType(A, &mattype));
25939566063dSJacob Faibussowitsch     PetscCall(MatGetSize(A, &M, &N));
25949566063dSJacob Faibussowitsch     PetscCall(MatGetLocalSize(A, &m, &n));
25959566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B));
25969566063dSJacob Faibussowitsch     PetscCall(MatSetType(B, mattype));
25979566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(B, m, n, M, N));
25989566063dSJacob Faibussowitsch     PetscCall(MatSetBlockSizesFromMats(B, A, A));
25999566063dSJacob Faibussowitsch     PetscCall(MatSetUp(B));
26009566063dSJacob Faibussowitsch     PetscCall(MatSetOption(B, MAT_NEW_NONZERO_ALLOCATION_ERR, PETSC_FALSE));
2601e885f1abSBarry Smith 
26029566063dSJacob Faibussowitsch     PetscCall(SNESGetFunction(snes, NULL, NULL, &functx));
26039566063dSJacob Faibussowitsch     PetscCall(SNESComputeJacobianDefault(snes, x, B, B, functx));
260412837594SBarry Smith 
26059566063dSJacob Faibussowitsch     PetscCall(MatDuplicate(B, MAT_COPY_VALUES, &D));
26069566063dSJacob Faibussowitsch     PetscCall(MatAYPX(D, -1.0, A, DIFFERENT_NONZERO_PATTERN));
26079566063dSJacob Faibussowitsch     PetscCall(MatNorm(D, NORM_FROBENIUS, &nrm));
26089566063dSJacob Faibussowitsch     PetscCall(MatNorm(A, NORM_FROBENIUS, &gnorm));
26099566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&D));
261012837594SBarry Smith     if (!gnorm) gnorm = 1; /* just in case */
26119566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "  ||J - Jfd||_F/||J||_F = %g, ||J - Jfd||_F = %g\n", (double)(nrm / gnorm), (double)nrm));
261212837594SBarry Smith 
2613e885f1abSBarry Smith     if (complete_print) {
26149566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Hand-coded Jacobian ----------\n"));
26159566063dSJacob Faibussowitsch       PetscCall(MatView(A, mviewer));
26169566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Finite difference Jacobian ----------\n"));
26179566063dSJacob Faibussowitsch       PetscCall(MatView(B, mviewer));
2618e885f1abSBarry Smith     }
2619e885f1abSBarry Smith 
2620df10fb39SFande Kong     if (threshold_print || complete_print) {
2621e885f1abSBarry Smith       PetscInt           Istart, Iend, *ccols, bncols, cncols, j, row;
2622e885f1abSBarry Smith       PetscScalar       *cvals;
2623e885f1abSBarry Smith       const PetscInt    *bcols;
2624e885f1abSBarry Smith       const PetscScalar *bvals;
2625e885f1abSBarry Smith 
26269566063dSJacob Faibussowitsch       PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &C));
26279566063dSJacob Faibussowitsch       PetscCall(MatSetType(C, mattype));
26289566063dSJacob Faibussowitsch       PetscCall(MatSetSizes(C, m, n, M, N));
26299566063dSJacob Faibussowitsch       PetscCall(MatSetBlockSizesFromMats(C, A, A));
26309566063dSJacob Faibussowitsch       PetscCall(MatSetUp(C));
26319566063dSJacob Faibussowitsch       PetscCall(MatSetOption(C, MAT_NEW_NONZERO_ALLOCATION_ERR, PETSC_FALSE));
26320e276705SLisandro Dalcin 
26339566063dSJacob Faibussowitsch       PetscCall(MatAYPX(B, -1.0, A, DIFFERENT_NONZERO_PATTERN));
26349566063dSJacob Faibussowitsch       PetscCall(MatGetOwnershipRange(B, &Istart, &Iend));
2635e885f1abSBarry Smith 
2636e885f1abSBarry Smith       for (row = Istart; row < Iend; row++) {
26379566063dSJacob Faibussowitsch         PetscCall(MatGetRow(B, row, &bncols, &bcols, &bvals));
26389566063dSJacob Faibussowitsch         PetscCall(PetscMalloc2(bncols, &ccols, bncols, &cvals));
2639e885f1abSBarry Smith         for (j = 0, cncols = 0; j < bncols; j++) {
264023a52b1dSBarry Smith           if (PetscAbsScalar(bvals[j]) > threshold) {
2641e885f1abSBarry Smith             ccols[cncols] = bcols[j];
2642e885f1abSBarry Smith             cvals[cncols] = bvals[j];
2643e885f1abSBarry Smith             cncols += 1;
2644e885f1abSBarry Smith           }
2645e885f1abSBarry Smith         }
264648a46eb9SPierre Jolivet         if (cncols) PetscCall(MatSetValues(C, 1, &row, cncols, ccols, cvals, INSERT_VALUES));
26479566063dSJacob Faibussowitsch         PetscCall(MatRestoreRow(B, row, &bncols, &bcols, &bvals));
26489566063dSJacob Faibussowitsch         PetscCall(PetscFree2(ccols, cvals));
2649e885f1abSBarry Smith       }
26509566063dSJacob Faibussowitsch       PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY));
26519566063dSJacob Faibussowitsch       PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY));
26529566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Hand-coded minus finite-difference Jacobian with tolerance %g ----------\n", (double)threshold));
26539566063dSJacob Faibussowitsch       PetscCall(MatView(C, complete_print ? mviewer : viewer));
26549566063dSJacob Faibussowitsch       PetscCall(MatDestroy(&C));
2655e885f1abSBarry Smith     }
26569566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&A));
26579566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&B));
26589566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&JT));
26592cd624f9SStefano Zampini     if (Jsave) jacobian = Jsave;
266012837594SBarry Smith     if (jacobian != snes->jacobian_pre) {
266112837594SBarry Smith       jacobian = snes->jacobian_pre;
26629566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  ---------- Testing Jacobian for preconditioner -------------\n"));
26639371c9d4SSatish Balay     } else jacobian = NULL;
266412837594SBarry Smith   }
26659566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&x));
26661baa6e33SBarry Smith   if (complete_print) PetscCall(PetscViewerPopFormat(mviewer));
26679566063dSJacob Faibussowitsch   if (mviewer) PetscCall(PetscViewerDestroy(&mviewer));
26689566063dSJacob Faibussowitsch   PetscCall(PetscViewerASCIISetTab(viewer, tabs));
26693ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2670e885f1abSBarry Smith }
2671e885f1abSBarry Smith 
267262fef451SLois Curfman McInnes /*@
2673f6dfbefdSBarry Smith   SNESComputeJacobian - Computes the Jacobian matrix that has been set with `SNESSetJacobian()`.
267462fef451SLois Curfman McInnes 
2675c3339decSBarry Smith   Collective
2676c7afd0dbSLois Curfman McInnes 
267762fef451SLois Curfman McInnes   Input Parameters:
2678f6dfbefdSBarry Smith + snes - the `SNES` context
2679*e4094ef1SJacob Faibussowitsch - X    - input vector
268062fef451SLois Curfman McInnes 
268162fef451SLois Curfman McInnes   Output Parameters:
2682c7afd0dbSLois Curfman McInnes + A - Jacobian matrix
2683f6dfbefdSBarry Smith - B - optional matrix for building the preconditioner
2684fee21e36SBarry Smith 
2685e35cf81dSBarry Smith   Options Database Keys:
268667b8a455SSatish Balay + -snes_lag_preconditioner <lag>           - how often to rebuild preconditioner
268767b8a455SSatish Balay . -snes_lag_jacobian <lag>                 - how often to rebuild Jacobian
2688455a5933SJed Brown . -snes_test_jacobian <optional threshold> - compare the user provided Jacobian with one compute via finite differences to check for errors.  If a threshold is given, display only those entries whose difference is greater than the threshold.
2689455a5933SJed Brown . -snes_test_jacobian_view                 - display the user provided Jacobian, the finite difference Jacobian and the difference between them to help users detect the location of errors in the user provided Jacobian
2690693365a8SJed Brown . -snes_compare_explicit                   - Compare the computed Jacobian to the finite difference Jacobian and output the differences
2691693365a8SJed Brown . -snes_compare_explicit_draw              - Compare the computed Jacobian to the finite difference Jacobian and draw the result
2692693365a8SJed Brown . -snes_compare_explicit_contour           - Compare the computed Jacobian to the finite difference Jacobian and draw a contour plot with the result
26934c30e9fbSJed Brown . -snes_compare_operator                   - Make the comparison options above use the operator instead of the preconditioning matrix
269494d6a431SBarry Smith . -snes_compare_coloring                   - Compute the finite difference Jacobian using coloring and display norms of difference
2695a5b23f4aSJose E. Roman . -snes_compare_coloring_display           - Compute the finite difference Jacobian using coloring and display verbose differences
2696c01495d3SJed Brown . -snes_compare_coloring_threshold         - Display only those matrix entries that differ by more than a given threshold
2697dc4c0fb0SBarry Smith . -snes_compare_coloring_threshold_atol    - Absolute tolerance for difference in matrix entries to be displayed by `-snes_compare_coloring_threshold`
2698dc4c0fb0SBarry Smith . -snes_compare_coloring_threshold_rtol    - Relative tolerance for difference in matrix entries to be displayed by `-snes_compare_coloring_threshold`
2699a5b23f4aSJose E. Roman . -snes_compare_coloring_draw              - Compute the finite difference Jacobian using coloring and draw differences
2700a5b23f4aSJose E. Roman - -snes_compare_coloring_draw_contour      - Compute the finite difference Jacobian using coloring and show contours of matrices and differences
2701c01495d3SJed Brown 
2702dc4c0fb0SBarry Smith   Level: developer
2703dc4c0fb0SBarry Smith 
2704f6dfbefdSBarry Smith   Note:
270562fef451SLois Curfman McInnes   Most users should not need to explicitly call this routine, as it
270662fef451SLois Curfman McInnes   is used internally within the nonlinear solvers.
270762fef451SLois Curfman McInnes 
2708*e4094ef1SJacob Faibussowitsch   Developer Notes:
2709dc4c0fb0SBarry Smith   This has duplicative ways of checking the accuracy of the user provided Jacobian (see the options above). This is for historical reasons, the routine `SNESTestJacobian()` use to used
2710dc4c0fb0SBarry Smith   for with the `SNESType` of test that has been removed.
2711e885f1abSBarry Smith 
27121cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetJacobian()`, `KSPSetOperators()`, `MatStructure`, `SNESSetLagPreconditioner()`, `SNESSetLagJacobian()`
271362fef451SLois Curfman McInnes @*/
2714d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESComputeJacobian(SNES snes, Vec X, Mat A, Mat B)
2715d71ae5a4SJacob Faibussowitsch {
2716ace3abfcSBarry Smith   PetscBool flag;
27176cab3a1bSJed Brown   DM        dm;
2718942e3340SBarry Smith   DMSNES    sdm;
2719e0e3a89bSBarry Smith   KSP       ksp;
27203a40ed3dSBarry Smith 
27213a40ed3dSBarry Smith   PetscFunctionBegin;
27220700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
27230700a824SBarry Smith   PetscValidHeaderSpecific(X, VEC_CLASSID, 2);
2724c9780b6fSBarry Smith   PetscCheckSameComm(snes, 1, X, 2);
2725e0f629ddSJacob Faibussowitsch   PetscCall(VecValidValues_Internal(X, 2, PETSC_TRUE));
27269566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
27279566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &sdm));
27283232da50SPeter Brune 
2729ebd3b9afSBarry Smith   /* make sure that MatAssemblyBegin/End() is called on A matrix if it is matrix free */
2730fe3ffe1eSBarry Smith   if (snes->lagjacobian == -2) {
2731fe3ffe1eSBarry Smith     snes->lagjacobian = -1;
2732f5af7f23SKarl Rupp 
27339566063dSJacob Faibussowitsch     PetscCall(PetscInfo(snes, "Recomputing Jacobian/preconditioner because lag is -2 (means compute Jacobian, but then never again) \n"));
2734fe3ffe1eSBarry Smith   } else if (snes->lagjacobian == -1) {
27359566063dSJacob Faibussowitsch     PetscCall(PetscInfo(snes, "Reusing Jacobian/preconditioner because lag is -1\n"));
27369566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMFFD, &flag));
2737ebd3b9afSBarry Smith     if (flag) {
27389566063dSJacob Faibussowitsch       PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY));
27399566063dSJacob Faibussowitsch       PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY));
2740ebd3b9afSBarry Smith     }
27413ba16761SJacob Faibussowitsch     PetscFunctionReturn(PETSC_SUCCESS);
274237ec4e1aSPeter Brune   } else if (snes->lagjacobian > 1 && (snes->iter + snes->jac_iter) % snes->lagjacobian) {
274363a3b9bcSJacob Faibussowitsch     PetscCall(PetscInfo(snes, "Reusing Jacobian/preconditioner because lag is %" PetscInt_FMT " and SNES iteration is %" PetscInt_FMT "\n", snes->lagjacobian, snes->iter));
27449566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMFFD, &flag));
2745ebd3b9afSBarry Smith     if (flag) {
27469566063dSJacob Faibussowitsch       PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY));
27479566063dSJacob Faibussowitsch       PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY));
2748ebd3b9afSBarry Smith     }
27493ba16761SJacob Faibussowitsch     PetscFunctionReturn(PETSC_SUCCESS);
2750e35cf81dSBarry Smith   }
2751efd4aadfSBarry Smith   if (snes->npc && snes->npcside == PC_LEFT) {
27529566063dSJacob Faibussowitsch     PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY));
27539566063dSJacob Faibussowitsch     PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY));
27543ba16761SJacob Faibussowitsch     PetscFunctionReturn(PETSC_SUCCESS);
2755d728fb7dSPeter Brune   }
2756e35cf81dSBarry Smith 
27579566063dSJacob Faibussowitsch   PetscCall(PetscLogEventBegin(SNES_JacobianEval, snes, X, A, B));
27589566063dSJacob Faibussowitsch   PetscCall(VecLockReadPush(X));
2759800f99ffSJeremy L Thompson   {
2760800f99ffSJeremy L Thompson     void *ctx;
2761800f99ffSJeremy L Thompson     PetscErrorCode (*J)(SNES, Vec, Mat, Mat, void *);
2762800f99ffSJeremy L Thompson     PetscCall(DMSNESGetJacobian(dm, &J, &ctx));
2763800f99ffSJeremy L Thompson     PetscCallBack("SNES callback Jacobian", (*J)(snes, X, A, B, ctx));
2764800f99ffSJeremy L Thompson   }
27659566063dSJacob Faibussowitsch   PetscCall(VecLockReadPop(X));
27669566063dSJacob Faibussowitsch   PetscCall(PetscLogEventEnd(SNES_JacobianEval, snes, X, A, B));
276728d58a37SPierre Jolivet 
276828d58a37SPierre Jolivet   /* attach latest linearization point to the preconditioning matrix */
27699566063dSJacob Faibussowitsch   PetscCall(PetscObjectCompose((PetscObject)B, "__SNES_latest_X", (PetscObject)X));
2770a8054027SBarry Smith 
2771e0e3a89bSBarry Smith   /* the next line ensures that snes->ksp exists */
27729566063dSJacob Faibussowitsch   PetscCall(SNESGetKSP(snes, &ksp));
27733b4f5425SBarry Smith   if (snes->lagpreconditioner == -2) {
27749566063dSJacob Faibussowitsch     PetscCall(PetscInfo(snes, "Rebuilding preconditioner exactly once since lag is -2\n"));
27759566063dSJacob Faibussowitsch     PetscCall(KSPSetReusePreconditioner(snes->ksp, PETSC_FALSE));
27763b4f5425SBarry Smith     snes->lagpreconditioner = -1;
27773b4f5425SBarry Smith   } else if (snes->lagpreconditioner == -1) {
27789566063dSJacob Faibussowitsch     PetscCall(PetscInfo(snes, "Reusing preconditioner because lag is -1\n"));
27799566063dSJacob Faibussowitsch     PetscCall(KSPSetReusePreconditioner(snes->ksp, PETSC_TRUE));
278037ec4e1aSPeter Brune   } else if (snes->lagpreconditioner > 1 && (snes->iter + snes->pre_iter) % snes->lagpreconditioner) {
278163a3b9bcSJacob Faibussowitsch     PetscCall(PetscInfo(snes, "Reusing preconditioner because lag is %" PetscInt_FMT " and SNES iteration is %" PetscInt_FMT "\n", snes->lagpreconditioner, snes->iter));
27829566063dSJacob Faibussowitsch     PetscCall(KSPSetReusePreconditioner(snes->ksp, PETSC_TRUE));
2783d1e9a80fSBarry Smith   } else {
27849566063dSJacob Faibussowitsch     PetscCall(PetscInfo(snes, "Rebuilding preconditioner\n"));
27859566063dSJacob Faibussowitsch     PetscCall(KSPSetReusePreconditioner(snes->ksp, PETSC_FALSE));
2786a8054027SBarry Smith   }
2787a8054027SBarry Smith 
27889566063dSJacob Faibussowitsch   PetscCall(SNESTestJacobian(snes));
27896d84be18SBarry Smith   /* make sure user returned a correct Jacobian and preconditioner */
279094ab13aaSBarry Smith   /* PetscValidHeaderSpecific(A,MAT_CLASSID,3);
279194ab13aaSBarry Smith     PetscValidHeaderSpecific(B,MAT_CLASSID,4);   */
2792693365a8SJed Brown   {
2793693365a8SJed Brown     PetscBool flag = PETSC_FALSE, flag_draw = PETSC_FALSE, flag_contour = PETSC_FALSE, flag_operator = PETSC_FALSE;
27949566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_explicit", NULL, NULL, &flag));
27959566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_explicit_draw", NULL, NULL, &flag_draw));
27969566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_explicit_draw_contour", NULL, NULL, &flag_contour));
27979566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_operator", NULL, NULL, &flag_operator));
2798693365a8SJed Brown     if (flag || flag_draw || flag_contour) {
27990298fd71SBarry Smith       Mat         Bexp_mine = NULL, Bexp, FDexp;
2800693365a8SJed Brown       PetscViewer vdraw, vstdout;
28016b3a5b13SJed Brown       PetscBool   flg;
2802693365a8SJed Brown       if (flag_operator) {
28039566063dSJacob Faibussowitsch         PetscCall(MatComputeOperator(A, MATAIJ, &Bexp_mine));
2804693365a8SJed Brown         Bexp = Bexp_mine;
2805693365a8SJed Brown       } else {
2806693365a8SJed Brown         /* See if the preconditioning matrix can be viewed and added directly */
28079566063dSJacob Faibussowitsch         PetscCall(PetscObjectBaseTypeCompareAny((PetscObject)B, &flg, MATSEQAIJ, MATMPIAIJ, MATSEQDENSE, MATMPIDENSE, MATSEQBAIJ, MATMPIBAIJ, MATSEQSBAIJ, MATMPIBAIJ, ""));
280894ab13aaSBarry Smith         if (flg) Bexp = B;
2809693365a8SJed Brown         else {
2810693365a8SJed Brown           /* If the "preconditioning" matrix is itself MATSHELL or some other type without direct support */
28119566063dSJacob Faibussowitsch           PetscCall(MatComputeOperator(B, MATAIJ, &Bexp_mine));
2812693365a8SJed Brown           Bexp = Bexp_mine;
2813693365a8SJed Brown         }
2814693365a8SJed Brown       }
28159566063dSJacob Faibussowitsch       PetscCall(MatConvert(Bexp, MATSAME, MAT_INITIAL_MATRIX, &FDexp));
28169566063dSJacob Faibussowitsch       PetscCall(SNESComputeJacobianDefault(snes, X, FDexp, FDexp, NULL));
28179566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)snes), &vstdout));
2818693365a8SJed Brown       if (flag_draw || flag_contour) {
28199566063dSJacob Faibussowitsch         PetscCall(PetscViewerDrawOpen(PetscObjectComm((PetscObject)snes), NULL, "Explicit Jacobians", PETSC_DECIDE, PETSC_DECIDE, 300, 300, &vdraw));
28209566063dSJacob Faibussowitsch         if (flag_contour) PetscCall(PetscViewerPushFormat(vdraw, PETSC_VIEWER_DRAW_CONTOUR));
28210298fd71SBarry Smith       } else vdraw = NULL;
28229566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(vstdout, "Explicit %s\n", flag_operator ? "Jacobian" : "preconditioning Jacobian"));
28239566063dSJacob Faibussowitsch       if (flag) PetscCall(MatView(Bexp, vstdout));
28249566063dSJacob Faibussowitsch       if (vdraw) PetscCall(MatView(Bexp, vdraw));
28259566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(vstdout, "Finite difference Jacobian\n"));
28269566063dSJacob Faibussowitsch       if (flag) PetscCall(MatView(FDexp, vstdout));
28279566063dSJacob Faibussowitsch       if (vdraw) PetscCall(MatView(FDexp, vdraw));
28289566063dSJacob Faibussowitsch       PetscCall(MatAYPX(FDexp, -1.0, Bexp, SAME_NONZERO_PATTERN));
28299566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(vstdout, "User-provided matrix minus finite difference Jacobian\n"));
28309566063dSJacob Faibussowitsch       if (flag) PetscCall(MatView(FDexp, vstdout));
2831693365a8SJed Brown       if (vdraw) { /* Always use contour for the difference */
28329566063dSJacob Faibussowitsch         PetscCall(PetscViewerPushFormat(vdraw, PETSC_VIEWER_DRAW_CONTOUR));
28339566063dSJacob Faibussowitsch         PetscCall(MatView(FDexp, vdraw));
28349566063dSJacob Faibussowitsch         PetscCall(PetscViewerPopFormat(vdraw));
2835693365a8SJed Brown       }
28369566063dSJacob Faibussowitsch       if (flag_contour) PetscCall(PetscViewerPopFormat(vdraw));
28379566063dSJacob Faibussowitsch       PetscCall(PetscViewerDestroy(&vdraw));
28389566063dSJacob Faibussowitsch       PetscCall(MatDestroy(&Bexp_mine));
28399566063dSJacob Faibussowitsch       PetscCall(MatDestroy(&FDexp));
2840693365a8SJed Brown     }
2841693365a8SJed Brown   }
28424c30e9fbSJed Brown   {
28436719d8e4SJed Brown     PetscBool flag = PETSC_FALSE, flag_display = PETSC_FALSE, flag_draw = PETSC_FALSE, flag_contour = PETSC_FALSE, flag_threshold = PETSC_FALSE;
28446719d8e4SJed Brown     PetscReal threshold_atol = PETSC_SQRT_MACHINE_EPSILON, threshold_rtol = 10 * PETSC_SQRT_MACHINE_EPSILON;
28459566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring", NULL, NULL, &flag));
28469566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring_display", NULL, NULL, &flag_display));
28479566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring_draw", NULL, NULL, &flag_draw));
28489566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring_draw_contour", NULL, NULL, &flag_contour));
28499566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring_threshold", NULL, NULL, &flag_threshold));
285027b0f280SBarry Smith     if (flag_threshold) {
28519566063dSJacob Faibussowitsch       PetscCall(PetscOptionsGetReal(((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring_threshold_rtol", &threshold_rtol, NULL));
28529566063dSJacob Faibussowitsch       PetscCall(PetscOptionsGetReal(((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring_threshold_atol", &threshold_atol, NULL));
285327b0f280SBarry Smith     }
28546719d8e4SJed Brown     if (flag || flag_display || flag_draw || flag_contour || flag_threshold) {
28554c30e9fbSJed Brown       Mat           Bfd;
28564c30e9fbSJed Brown       PetscViewer   vdraw, vstdout;
2857335efc43SPeter Brune       MatColoring   coloring;
28584c30e9fbSJed Brown       ISColoring    iscoloring;
28594c30e9fbSJed Brown       MatFDColoring matfdcoloring;
28604c30e9fbSJed Brown       PetscErrorCode (*func)(SNES, Vec, Vec, void *);
28614c30e9fbSJed Brown       void     *funcctx;
28626719d8e4SJed Brown       PetscReal norm1, norm2, normmax;
28634c30e9fbSJed Brown 
28649566063dSJacob Faibussowitsch       PetscCall(MatDuplicate(B, MAT_DO_NOT_COPY_VALUES, &Bfd));
28659566063dSJacob Faibussowitsch       PetscCall(MatColoringCreate(Bfd, &coloring));
28669566063dSJacob Faibussowitsch       PetscCall(MatColoringSetType(coloring, MATCOLORINGSL));
28679566063dSJacob Faibussowitsch       PetscCall(MatColoringSetFromOptions(coloring));
28689566063dSJacob Faibussowitsch       PetscCall(MatColoringApply(coloring, &iscoloring));
28699566063dSJacob Faibussowitsch       PetscCall(MatColoringDestroy(&coloring));
28709566063dSJacob Faibussowitsch       PetscCall(MatFDColoringCreate(Bfd, iscoloring, &matfdcoloring));
28719566063dSJacob Faibussowitsch       PetscCall(MatFDColoringSetFromOptions(matfdcoloring));
28729566063dSJacob Faibussowitsch       PetscCall(MatFDColoringSetUp(Bfd, iscoloring, matfdcoloring));
28739566063dSJacob Faibussowitsch       PetscCall(ISColoringDestroy(&iscoloring));
28744c30e9fbSJed Brown 
28754c30e9fbSJed Brown       /* This method of getting the function is currently unreliable since it doesn't work for DM local functions. */
28769566063dSJacob Faibussowitsch       PetscCall(SNESGetFunction(snes, NULL, &func, &funcctx));
28779566063dSJacob Faibussowitsch       PetscCall(MatFDColoringSetFunction(matfdcoloring, (PetscErrorCode(*)(void))func, funcctx));
28789566063dSJacob Faibussowitsch       PetscCall(PetscObjectSetOptionsPrefix((PetscObject)matfdcoloring, ((PetscObject)snes)->prefix));
28799566063dSJacob Faibussowitsch       PetscCall(PetscObjectAppendOptionsPrefix((PetscObject)matfdcoloring, "coloring_"));
28809566063dSJacob Faibussowitsch       PetscCall(MatFDColoringSetFromOptions(matfdcoloring));
28819566063dSJacob Faibussowitsch       PetscCall(MatFDColoringApply(Bfd, matfdcoloring, X, snes));
28829566063dSJacob Faibussowitsch       PetscCall(MatFDColoringDestroy(&matfdcoloring));
28834c30e9fbSJed Brown 
28849566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)snes), &vstdout));
28854c30e9fbSJed Brown       if (flag_draw || flag_contour) {
28869566063dSJacob Faibussowitsch         PetscCall(PetscViewerDrawOpen(PetscObjectComm((PetscObject)snes), NULL, "Colored Jacobians", PETSC_DECIDE, PETSC_DECIDE, 300, 300, &vdraw));
28879566063dSJacob Faibussowitsch         if (flag_contour) PetscCall(PetscViewerPushFormat(vdraw, PETSC_VIEWER_DRAW_CONTOUR));
28880298fd71SBarry Smith       } else vdraw = NULL;
28899566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(vstdout, "Explicit preconditioning Jacobian\n"));
28909566063dSJacob Faibussowitsch       if (flag_display) PetscCall(MatView(B, vstdout));
28919566063dSJacob Faibussowitsch       if (vdraw) PetscCall(MatView(B, vdraw));
28929566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(vstdout, "Colored Finite difference Jacobian\n"));
28939566063dSJacob Faibussowitsch       if (flag_display) PetscCall(MatView(Bfd, vstdout));
28949566063dSJacob Faibussowitsch       if (vdraw) PetscCall(MatView(Bfd, vdraw));
28959566063dSJacob Faibussowitsch       PetscCall(MatAYPX(Bfd, -1.0, B, SAME_NONZERO_PATTERN));
28969566063dSJacob Faibussowitsch       PetscCall(MatNorm(Bfd, NORM_1, &norm1));
28979566063dSJacob Faibussowitsch       PetscCall(MatNorm(Bfd, NORM_FROBENIUS, &norm2));
28989566063dSJacob Faibussowitsch       PetscCall(MatNorm(Bfd, NORM_MAX, &normmax));
28999566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(vstdout, "User-provided matrix minus finite difference Jacobian, norm1=%g normFrob=%g normmax=%g\n", (double)norm1, (double)norm2, (double)normmax));
29009566063dSJacob Faibussowitsch       if (flag_display) PetscCall(MatView(Bfd, vstdout));
29014c30e9fbSJed Brown       if (vdraw) { /* Always use contour for the difference */
29029566063dSJacob Faibussowitsch         PetscCall(PetscViewerPushFormat(vdraw, PETSC_VIEWER_DRAW_CONTOUR));
29039566063dSJacob Faibussowitsch         PetscCall(MatView(Bfd, vdraw));
29049566063dSJacob Faibussowitsch         PetscCall(PetscViewerPopFormat(vdraw));
29054c30e9fbSJed Brown       }
29069566063dSJacob Faibussowitsch       if (flag_contour) PetscCall(PetscViewerPopFormat(vdraw));
29076719d8e4SJed Brown 
29086719d8e4SJed Brown       if (flag_threshold) {
29096719d8e4SJed Brown         PetscInt bs, rstart, rend, i;
29109566063dSJacob Faibussowitsch         PetscCall(MatGetBlockSize(B, &bs));
29119566063dSJacob Faibussowitsch         PetscCall(MatGetOwnershipRange(B, &rstart, &rend));
29126719d8e4SJed Brown         for (i = rstart; i < rend; i++) {
29136719d8e4SJed Brown           const PetscScalar *ba, *ca;
29146719d8e4SJed Brown           const PetscInt    *bj, *cj;
29156719d8e4SJed Brown           PetscInt           bn, cn, j, maxentrycol = -1, maxdiffcol = -1, maxrdiffcol = -1;
29166719d8e4SJed Brown           PetscReal          maxentry = 0, maxdiff = 0, maxrdiff = 0;
29179566063dSJacob Faibussowitsch           PetscCall(MatGetRow(B, i, &bn, &bj, &ba));
29189566063dSJacob Faibussowitsch           PetscCall(MatGetRow(Bfd, i, &cn, &cj, &ca));
29195f80ce2aSJacob Faibussowitsch           PetscCheck(bn == cn, ((PetscObject)A)->comm, PETSC_ERR_PLIB, "Unexpected different nonzero pattern in -snes_compare_coloring_threshold");
29206719d8e4SJed Brown           for (j = 0; j < bn; j++) {
29216719d8e4SJed Brown             PetscReal rdiff = PetscAbsScalar(ca[j]) / (threshold_atol + threshold_rtol * PetscAbsScalar(ba[j]));
29226719d8e4SJed Brown             if (PetscAbsScalar(ba[j]) > PetscAbs(maxentry)) {
29236719d8e4SJed Brown               maxentrycol = bj[j];
29246719d8e4SJed Brown               maxentry    = PetscRealPart(ba[j]);
29256719d8e4SJed Brown             }
29266719d8e4SJed Brown             if (PetscAbsScalar(ca[j]) > PetscAbs(maxdiff)) {
29276719d8e4SJed Brown               maxdiffcol = bj[j];
29286719d8e4SJed Brown               maxdiff    = PetscRealPart(ca[j]);
29296719d8e4SJed Brown             }
29306719d8e4SJed Brown             if (rdiff > maxrdiff) {
29316719d8e4SJed Brown               maxrdiffcol = bj[j];
29326719d8e4SJed Brown               maxrdiff    = rdiff;
29336719d8e4SJed Brown             }
29346719d8e4SJed Brown           }
29356719d8e4SJed Brown           if (maxrdiff > 1) {
293663a3b9bcSJacob Faibussowitsch             PetscCall(PetscViewerASCIIPrintf(vstdout, "row %" PetscInt_FMT " (maxentry=%g at %" PetscInt_FMT ", maxdiff=%g at %" PetscInt_FMT ", maxrdiff=%g at %" PetscInt_FMT "):", i, (double)maxentry, maxentrycol, (double)maxdiff, maxdiffcol, (double)maxrdiff, maxrdiffcol));
29376719d8e4SJed Brown             for (j = 0; j < bn; j++) {
29386719d8e4SJed Brown               PetscReal rdiff;
29396719d8e4SJed Brown               rdiff = PetscAbsScalar(ca[j]) / (threshold_atol + threshold_rtol * PetscAbsScalar(ba[j]));
294048a46eb9SPierre Jolivet               if (rdiff > 1) PetscCall(PetscViewerASCIIPrintf(vstdout, " (%" PetscInt_FMT ",%g:%g)", bj[j], (double)PetscRealPart(ba[j]), (double)PetscRealPart(ca[j])));
29416719d8e4SJed Brown             }
294263a3b9bcSJacob Faibussowitsch             PetscCall(PetscViewerASCIIPrintf(vstdout, "\n"));
29436719d8e4SJed Brown           }
29449566063dSJacob Faibussowitsch           PetscCall(MatRestoreRow(B, i, &bn, &bj, &ba));
29459566063dSJacob Faibussowitsch           PetscCall(MatRestoreRow(Bfd, i, &cn, &cj, &ca));
29466719d8e4SJed Brown         }
29476719d8e4SJed Brown       }
29489566063dSJacob Faibussowitsch       PetscCall(PetscViewerDestroy(&vdraw));
29499566063dSJacob Faibussowitsch       PetscCall(MatDestroy(&Bfd));
29504c30e9fbSJed Brown     }
29514c30e9fbSJed Brown   }
29523ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
29539b94acceSBarry Smith }
29549b94acceSBarry Smith 
2955bf388a1fSBarry Smith /*MC
2956f6dfbefdSBarry Smith     SNESJacobianFunction - Function used by `SNES` to compute the nonlinear Jacobian of the function to be solved by `SNES`
2957bf388a1fSBarry Smith 
2958bf388a1fSBarry Smith      Synopsis:
2959411c0326SBarry Smith      #include "petscsnes.h"
2960411c0326SBarry Smith      PetscErrorCode SNESJacobianFunction(SNES snes,Vec x,Mat Amat,Mat Pmat,void *ctx);
2961bf388a1fSBarry Smith 
2962c3339decSBarry Smith      Collective
29631843f636SBarry Smith 
29641843f636SBarry Smith     Input Parameters:
29651843f636SBarry Smith +  x - input vector, the Jacobian is to be computed at this value
2966bf388a1fSBarry Smith -  ctx - [optional] user-defined Jacobian context
2967bf388a1fSBarry Smith 
29681843f636SBarry Smith     Output Parameters:
29691843f636SBarry Smith +  Amat - the matrix that defines the (approximate) Jacobian
2970dc4c0fb0SBarry Smith -  Pmat - the matrix to be used in constructing the preconditioner, usually the same as `Amat`.
29711843f636SBarry Smith 
2972878cb397SSatish Balay    Level: intermediate
2973878cb397SSatish Balay 
29741cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetFunction()`, `SNESGetFunction()`, `SNESSetJacobian()`, `SNESGetJacobian()`
2975bf388a1fSBarry Smith M*/
2976bf388a1fSBarry Smith 
29779b94acceSBarry Smith /*@C
29789b94acceSBarry Smith   SNESSetJacobian - Sets the function to compute Jacobian as well as the
2979044dda88SLois Curfman McInnes   location to store the matrix.
29809b94acceSBarry Smith 
2981c3339decSBarry Smith   Logically Collective
2982c7afd0dbSLois Curfman McInnes 
29839b94acceSBarry Smith   Input Parameters:
2984f6dfbefdSBarry Smith + snes - the `SNES` context
2985e5d3d808SBarry Smith . Amat - the matrix that defines the (approximate) Jacobian
2986dc4c0fb0SBarry Smith . Pmat - the matrix to be used in constructing the preconditioner, usually the same as `Amat`.
2987dc4c0fb0SBarry Smith . J    - Jacobian evaluation routine (if `NULL` then `SNES` retains any previously set value), see `SNESJacobianFunction` for details
2988c7afd0dbSLois Curfman McInnes - ctx  - [optional] user-defined context for private data for the
2989dc4c0fb0SBarry Smith          Jacobian evaluation routine (may be `NULL`) (if `NULL` then `SNES` retains any previously set value)
2990dc4c0fb0SBarry Smith 
2991dc4c0fb0SBarry Smith   Level: beginner
29929b94acceSBarry Smith 
29939b94acceSBarry Smith   Notes:
2994dc4c0fb0SBarry Smith   If the `Amat` matrix and `Pmat` matrix are different you must call `MatAssemblyBegin()`/`MatAssemblyEnd()` on
299516913363SBarry Smith   each matrix.
299616913363SBarry Smith 
2997dc4c0fb0SBarry Smith   If you know the operator `Amat` has a null space you can use `MatSetNullSpace()` and `MatSetTransposeNullSpace()` to supply the null
2998dc4c0fb0SBarry Smith   space to `Amat` and the `KSP` solvers will automatically use that null space as needed during the solution process.
2999895c21f2SBarry Smith 
3000dc4c0fb0SBarry Smith   If using `SNESComputeJacobianDefaultColor()` to assemble a Jacobian, the `ctx` argument
3001f6dfbefdSBarry Smith   must be a `MatFDColoring`.
3002a8a26c1eSJed Brown 
3003c3cc8fd1SJed Brown   Other defect-correction schemes can be used by computing a different matrix in place of the Jacobian.  One common
3004f6dfbefdSBarry Smith   example is to use the "Picard linearization" which only differentiates through the highest order parts of each term using `SNESSetPicard()`
3005c3cc8fd1SJed Brown 
30061cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `KSPSetOperators()`, `SNESSetFunction()`, `MatMFFDComputeJacobian()`, `SNESComputeJacobianDefaultColor()`, `MatStructure`,
3007db781477SPatrick Sanan           `SNESSetPicard()`, `SNESJacobianFunction`
30089b94acceSBarry Smith @*/
3009d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetJacobian(SNES snes, Mat Amat, Mat Pmat, PetscErrorCode (*J)(SNES, Vec, Mat, Mat, void *), void *ctx)
3010d71ae5a4SJacob Faibussowitsch {
30116cab3a1bSJed Brown   DM dm;
30123a7fca6bSBarry Smith 
30133a40ed3dSBarry Smith   PetscFunctionBegin;
30140700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3015e5d3d808SBarry Smith   if (Amat) PetscValidHeaderSpecific(Amat, MAT_CLASSID, 2);
3016e5d3d808SBarry Smith   if (Pmat) PetscValidHeaderSpecific(Pmat, MAT_CLASSID, 3);
3017e5d3d808SBarry Smith   if (Amat) PetscCheckSameComm(snes, 1, Amat, 2);
3018e5d3d808SBarry Smith   if (Pmat) PetscCheckSameComm(snes, 1, Pmat, 3);
30199566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
30209566063dSJacob Faibussowitsch   PetscCall(DMSNESSetJacobian(dm, J, ctx));
3021e5d3d808SBarry Smith   if (Amat) {
30229566063dSJacob Faibussowitsch     PetscCall(PetscObjectReference((PetscObject)Amat));
30239566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&snes->jacobian));
3024f5af7f23SKarl Rupp 
3025e5d3d808SBarry Smith     snes->jacobian = Amat;
30263a7fca6bSBarry Smith   }
3027e5d3d808SBarry Smith   if (Pmat) {
30289566063dSJacob Faibussowitsch     PetscCall(PetscObjectReference((PetscObject)Pmat));
30299566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&snes->jacobian_pre));
3030f5af7f23SKarl Rupp 
3031e5d3d808SBarry Smith     snes->jacobian_pre = Pmat;
30323a7fca6bSBarry Smith   }
30333ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
30349b94acceSBarry Smith }
303562fef451SLois Curfman McInnes 
3036c2aafc4cSSatish Balay /*@C
3037b4fd4287SBarry Smith   SNESGetJacobian - Returns the Jacobian matrix and optionally the user
3038b4fd4287SBarry Smith   provided context for evaluating the Jacobian.
3039b4fd4287SBarry Smith 
3040f6dfbefdSBarry Smith   Not Collective, but `Mat` object will be parallel if `SNES` object is
3041c7afd0dbSLois Curfman McInnes 
3042b4fd4287SBarry Smith   Input Parameter:
3043b4fd4287SBarry Smith . snes - the nonlinear solver context
3044b4fd4287SBarry Smith 
3045b4fd4287SBarry Smith   Output Parameters:
3046dc4c0fb0SBarry Smith + Amat - location to stash (approximate) Jacobian matrix (or `NULL`)
3047dc4c0fb0SBarry Smith . Pmat - location to stash matrix used to compute the preconditioner (or `NULL`)
304820f4b53cSBarry Smith . J    - location to put Jacobian function (or `NULL`), for calling sequence see `SNESJacobianFunction`
3049dc4c0fb0SBarry Smith - ctx  - location to stash Jacobian ctx (or `NULL`)
3050fee21e36SBarry Smith 
305136851e7fSLois Curfman McInnes   Level: advanced
305236851e7fSLois Curfman McInnes 
30531cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `Mat`, `SNESSetJacobian()`, `SNESComputeJacobian()`, `SNESJacobianFunction`, `SNESGetFunction()`
3054b4fd4287SBarry Smith @*/
3055d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetJacobian(SNES snes, Mat *Amat, Mat *Pmat, PetscErrorCode (**J)(SNES, Vec, Mat, Mat, void *), void **ctx)
3056d71ae5a4SJacob Faibussowitsch {
30576cab3a1bSJed Brown   DM dm;
30586cab3a1bSJed Brown 
30593a40ed3dSBarry Smith   PetscFunctionBegin;
30600700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3061e5d3d808SBarry Smith   if (Amat) *Amat = snes->jacobian;
3062e5d3d808SBarry Smith   if (Pmat) *Pmat = snes->jacobian_pre;
30639566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
3064800f99ffSJeremy L Thompson   PetscCall(DMSNESGetJacobian(dm, J, ctx));
30653ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3066b4fd4287SBarry Smith }
3067b4fd4287SBarry Smith 
3068d71ae5a4SJacob Faibussowitsch static PetscErrorCode SNESSetDefaultComputeJacobian(SNES snes)
3069d71ae5a4SJacob Faibussowitsch {
307058b371f3SBarry Smith   DM     dm;
307158b371f3SBarry Smith   DMSNES sdm;
307258b371f3SBarry Smith 
307358b371f3SBarry Smith   PetscFunctionBegin;
30749566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
30759566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &sdm));
307658b371f3SBarry Smith   if (!sdm->ops->computejacobian && snes->jacobian_pre) {
307758b371f3SBarry Smith     DM        dm;
307858b371f3SBarry Smith     PetscBool isdense, ismf;
307958b371f3SBarry Smith 
30809566063dSJacob Faibussowitsch     PetscCall(SNESGetDM(snes, &dm));
30819566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompareAny((PetscObject)snes->jacobian_pre, &isdense, MATSEQDENSE, MATMPIDENSE, MATDENSE, NULL));
30829566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompareAny((PetscObject)snes->jacobian_pre, &ismf, MATMFFD, MATSHELL, NULL));
308358b371f3SBarry Smith     if (isdense) {
30849566063dSJacob Faibussowitsch       PetscCall(DMSNESSetJacobian(dm, SNESComputeJacobianDefault, NULL));
308558b371f3SBarry Smith     } else if (!ismf) {
30869566063dSJacob Faibussowitsch       PetscCall(DMSNESSetJacobian(dm, SNESComputeJacobianDefaultColor, NULL));
308758b371f3SBarry Smith     }
308858b371f3SBarry Smith   }
30893ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
309058b371f3SBarry Smith }
309158b371f3SBarry Smith 
30929b94acceSBarry Smith /*@
30939b94acceSBarry Smith   SNESSetUp - Sets up the internal data structures for the later use
3094272ac6f2SLois Curfman McInnes   of a nonlinear solver.
30959b94acceSBarry Smith 
3096c3339decSBarry Smith   Collective
3097fee21e36SBarry Smith 
30982fe279fdSBarry Smith   Input Parameter:
3099f6dfbefdSBarry Smith . snes - the `SNES` context
3100c7afd0dbSLois Curfman McInnes 
3101dc4c0fb0SBarry Smith   Level: advanced
3102dc4c0fb0SBarry Smith 
3103f6dfbefdSBarry Smith   Note:
3104f6dfbefdSBarry Smith   For basic use of the `SNES` solvers the user need not explicitly call
3105f6dfbefdSBarry Smith   `SNESSetUp()`, since these actions will automatically occur during
3106f6dfbefdSBarry Smith   the call to `SNESSolve()`.  However, if one wishes to control this
3107f6dfbefdSBarry Smith   phase separately, `SNESSetUp()` should be called after `SNESCreate()`
3108f6dfbefdSBarry Smith   and optional routines of the form SNESSetXXX(), but before `SNESSolve()`.
3109272ac6f2SLois Curfman McInnes 
31101cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESCreate()`, `SNESSolve()`, `SNESDestroy()`
31119b94acceSBarry Smith @*/
3112d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetUp(SNES snes)
3113d71ae5a4SJacob Faibussowitsch {
31146cab3a1bSJed Brown   DM             dm;
3115942e3340SBarry Smith   DMSNES         sdm;
3116c35f09e5SBarry Smith   SNESLineSearch linesearch, pclinesearch;
31176e2a1849SPeter Brune   void          *lsprectx, *lspostctx;
31189b5c1c08SStefano Zampini   PetscBool      mf_operator, mf;
31199b5c1c08SStefano Zampini   Vec            f, fpc;
31209b5c1c08SStefano Zampini   void          *funcctx;
31219b5c1c08SStefano Zampini   void          *jacctx, *appctx;
31229b5c1c08SStefano Zampini   Mat            j, jpre;
31236b2b7091SBarry Smith   PetscErrorCode (*precheck)(SNESLineSearch, Vec, Vec, PetscBool *, void *);
31246b2b7091SBarry Smith   PetscErrorCode (*postcheck)(SNESLineSearch, Vec, Vec, Vec, PetscBool *, PetscBool *, void *);
31256e2a1849SPeter Brune   PetscErrorCode (*func)(SNES, Vec, Vec, void *);
3126d1e9a80fSBarry Smith   PetscErrorCode (*jac)(SNES, Vec, Mat, Mat, void *);
31273a40ed3dSBarry Smith 
31283a40ed3dSBarry Smith   PetscFunctionBegin;
31290700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
31303ba16761SJacob Faibussowitsch   if (snes->setupcalled) PetscFunctionReturn(PETSC_SUCCESS);
3131fc8bc0e3SRichard Tran Mills   PetscCall(PetscLogEventBegin(SNES_SetUp, snes, 0, 0, 0));
31329b94acceSBarry Smith 
313348a46eb9SPierre Jolivet   if (!((PetscObject)snes)->type_name) PetscCall(SNESSetType(snes, SNESNEWTONLS));
313485385478SLisandro Dalcin 
31359566063dSJacob Faibussowitsch   PetscCall(SNESGetFunction(snes, &snes->vec_func, NULL, NULL));
313658c9b817SLisandro Dalcin 
31379566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
31389566063dSJacob Faibussowitsch   PetscCall(DMGetDMSNES(dm, &sdm));
31399566063dSJacob Faibussowitsch   PetscCall(SNESSetDefaultComputeJacobian(snes));
314058b371f3SBarry Smith 
314148a46eb9SPierre Jolivet   if (!snes->vec_func) PetscCall(DMCreateGlobalVector(dm, &snes->vec_func));
3142efd51863SBarry Smith 
314348a46eb9SPierre Jolivet   if (!snes->ksp) PetscCall(SNESGetKSP(snes, &snes->ksp));
3144b710008aSBarry Smith 
3145d8d34be6SBarry Smith   if (snes->linesearch) {
31469566063dSJacob Faibussowitsch     PetscCall(SNESGetLineSearch(snes, &snes->linesearch));
31479566063dSJacob Faibussowitsch     PetscCall(SNESLineSearchSetFunction(snes->linesearch, SNESComputeFunction));
3148d8d34be6SBarry Smith   }
31499e764e56SPeter Brune 
31509b5c1c08SStefano Zampini   PetscCall(SNESGetUseMatrixFree(snes, &mf_operator, &mf));
3151b552625fSStefano Zampini   if (snes->npc && snes->npcside == PC_LEFT) {
3152172a4300SPeter Brune     snes->mf          = PETSC_TRUE;
3153172a4300SPeter Brune     snes->mf_operator = PETSC_FALSE;
3154172a4300SPeter Brune   }
3155d8f46077SPeter Brune 
3156efd4aadfSBarry Smith   if (snes->npc) {
31576e2a1849SPeter Brune     /* copy the DM over */
31589566063dSJacob Faibussowitsch     PetscCall(SNESGetDM(snes, &dm));
31599566063dSJacob Faibussowitsch     PetscCall(SNESSetDM(snes->npc, dm));
31606e2a1849SPeter Brune 
31619566063dSJacob Faibussowitsch     PetscCall(SNESGetFunction(snes, &f, &func, &funcctx));
31629566063dSJacob Faibussowitsch     PetscCall(VecDuplicate(f, &fpc));
31639566063dSJacob Faibussowitsch     PetscCall(SNESSetFunction(snes->npc, fpc, func, funcctx));
31649566063dSJacob Faibussowitsch     PetscCall(SNESGetJacobian(snes, &j, &jpre, &jac, &jacctx));
31659566063dSJacob Faibussowitsch     PetscCall(SNESSetJacobian(snes->npc, j, jpre, jac, jacctx));
31669566063dSJacob Faibussowitsch     PetscCall(SNESGetApplicationContext(snes, &appctx));
31679566063dSJacob Faibussowitsch     PetscCall(SNESSetApplicationContext(snes->npc, appctx));
31689b5c1c08SStefano Zampini     PetscCall(SNESSetUseMatrixFree(snes->npc, mf_operator, mf));
31699566063dSJacob Faibussowitsch     PetscCall(VecDestroy(&fpc));
31706e2a1849SPeter Brune 
31716e2a1849SPeter Brune     /* copy the function pointers over */
31729566063dSJacob Faibussowitsch     PetscCall(PetscObjectCopyFortranFunctionPointers((PetscObject)snes, (PetscObject)snes->npc));
31736e2a1849SPeter Brune 
31746e2a1849SPeter Brune     /* default to 1 iteration */
31759566063dSJacob Faibussowitsch     PetscCall(SNESSetTolerances(snes->npc, 0.0, 0.0, 0.0, 1, snes->npc->max_funcs));
3176efd4aadfSBarry Smith     if (snes->npcside == PC_RIGHT) {
31779566063dSJacob Faibussowitsch       PetscCall(SNESSetNormSchedule(snes->npc, SNES_NORM_FINAL_ONLY));
3178a9936a0cSPeter Brune     } else {
31799566063dSJacob Faibussowitsch       PetscCall(SNESSetNormSchedule(snes->npc, SNES_NORM_NONE));
3180a9936a0cSPeter Brune     }
31819566063dSJacob Faibussowitsch     PetscCall(SNESSetFromOptions(snes->npc));
31826e2a1849SPeter Brune 
31836e2a1849SPeter Brune     /* copy the line search context over */
3184d8d34be6SBarry Smith     if (snes->linesearch && snes->npc->linesearch) {
31859566063dSJacob Faibussowitsch       PetscCall(SNESGetLineSearch(snes, &linesearch));
31869566063dSJacob Faibussowitsch       PetscCall(SNESGetLineSearch(snes->npc, &pclinesearch));
31879566063dSJacob Faibussowitsch       PetscCall(SNESLineSearchGetPreCheck(linesearch, &precheck, &lsprectx));
31889566063dSJacob Faibussowitsch       PetscCall(SNESLineSearchGetPostCheck(linesearch, &postcheck, &lspostctx));
31899566063dSJacob Faibussowitsch       PetscCall(SNESLineSearchSetPreCheck(pclinesearch, precheck, lsprectx));
31909566063dSJacob Faibussowitsch       PetscCall(SNESLineSearchSetPostCheck(pclinesearch, postcheck, lspostctx));
31919566063dSJacob Faibussowitsch       PetscCall(PetscObjectCopyFortranFunctionPointers((PetscObject)linesearch, (PetscObject)pclinesearch));
31926e2a1849SPeter Brune     }
3193d8d34be6SBarry Smith   }
31941baa6e33SBarry Smith   if (snes->mf) PetscCall(SNESSetUpMatrixFree_Private(snes, snes->mf_operator, snes->mf_version));
319548a46eb9SPierre Jolivet   if (snes->ops->usercompute && !snes->user) PetscCall((*snes->ops->usercompute)(snes, (void **)&snes->user));
31966e2a1849SPeter Brune 
319737ec4e1aSPeter Brune   snes->jac_iter = 0;
319837ec4e1aSPeter Brune   snes->pre_iter = 0;
319937ec4e1aSPeter Brune 
3200dbbe0bcdSBarry Smith   PetscTryTypeMethod(snes, setup);
320158c9b817SLisandro Dalcin 
32029566063dSJacob Faibussowitsch   PetscCall(SNESSetDefaultComputeJacobian(snes));
320358b371f3SBarry Smith 
3204b552625fSStefano Zampini   if (snes->npc && snes->npcside == PC_LEFT) {
32056c67d002SPeter Brune     if (snes->functype == SNES_FUNCTION_PRECONDITIONED) {
3206d8d34be6SBarry Smith       if (snes->linesearch) {
32079566063dSJacob Faibussowitsch         PetscCall(SNESGetLineSearch(snes, &linesearch));
32089566063dSJacob Faibussowitsch         PetscCall(SNESLineSearchSetFunction(linesearch, SNESComputeFunctionDefaultNPC));
32096c67d002SPeter Brune       }
32106c67d002SPeter Brune     }
3211d8d34be6SBarry Smith   }
3212fc8bc0e3SRichard Tran Mills   PetscCall(PetscLogEventEnd(SNES_SetUp, snes, 0, 0, 0));
32137aaed0d8SBarry Smith   snes->setupcalled = PETSC_TRUE;
32143ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
32159b94acceSBarry Smith }
32169b94acceSBarry Smith 
321737596af1SLisandro Dalcin /*@
3218f6dfbefdSBarry Smith   SNESReset - Resets a `SNES` context to the snessetupcalled = 0 state and removes any allocated `Vec`s and `Mat`s
321937596af1SLisandro Dalcin 
3220c3339decSBarry Smith   Collective
322137596af1SLisandro Dalcin 
322237596af1SLisandro Dalcin   Input Parameter:
3223f6dfbefdSBarry Smith . snes - iterative context obtained from `SNESCreate()`
322437596af1SLisandro Dalcin 
3225d25893d9SBarry Smith   Level: intermediate
3226d25893d9SBarry Smith 
322795452b02SPatrick Sanan   Notes:
3228f6dfbefdSBarry Smith   Call this if you wish to reuse a `SNES` but with different size vectors
322937596af1SLisandro Dalcin 
3230f6dfbefdSBarry Smith   Also calls the application context destroy routine set with `SNESSetComputeApplicationContext()`
3231f6dfbefdSBarry Smith 
32321cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESDestroy()`, `SNESCreate()`, `SNESSetUp()`, `SNESSolve()`
323337596af1SLisandro Dalcin @*/
3234d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESReset(SNES snes)
3235d71ae5a4SJacob Faibussowitsch {
323637596af1SLisandro Dalcin   PetscFunctionBegin;
323737596af1SLisandro Dalcin   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3238d25893d9SBarry Smith   if (snes->ops->userdestroy && snes->user) {
32399566063dSJacob Faibussowitsch     PetscCall((*snes->ops->userdestroy)((void **)&snes->user));
32400298fd71SBarry Smith     snes->user = NULL;
3241d25893d9SBarry Smith   }
32421baa6e33SBarry Smith   if (snes->npc) PetscCall(SNESReset(snes->npc));
32438a23116dSBarry Smith 
3244dbbe0bcdSBarry Smith   PetscTryTypeMethod(snes, reset);
32451baa6e33SBarry Smith   if (snes->ksp) PetscCall(KSPReset(snes->ksp));
32469e764e56SPeter Brune 
32471baa6e33SBarry Smith   if (snes->linesearch) PetscCall(SNESLineSearchReset(snes->linesearch));
32489e764e56SPeter Brune 
32499566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&snes->vec_rhs));
32509566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&snes->vec_sol));
32519566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&snes->vec_sol_update));
32529566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&snes->vec_func));
32539566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&snes->jacobian));
32549566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&snes->jacobian_pre));
32559566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&snes->picard));
32569566063dSJacob Faibussowitsch   PetscCall(VecDestroyVecs(snes->nwork, &snes->work));
32579566063dSJacob Faibussowitsch   PetscCall(VecDestroyVecs(snes->nvwork, &snes->vwork));
3258f5af7f23SKarl Rupp 
325940fdac6aSLawrence Mitchell   snes->alwayscomputesfinalresidual = PETSC_FALSE;
326040fdac6aSLawrence Mitchell 
326137596af1SLisandro Dalcin   snes->nwork = snes->nvwork = 0;
326237596af1SLisandro Dalcin   snes->setupcalled          = PETSC_FALSE;
32633ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
326437596af1SLisandro Dalcin }
326537596af1SLisandro Dalcin 
326652baeb72SSatish Balay /*@
3267f6dfbefdSBarry Smith   SNESConvergedReasonViewCancel - Clears all the reason view functions for a `SNES` object.
3268c4421ceaSFande Kong 
3269c3339decSBarry Smith   Collective
3270c4421ceaSFande Kong 
3271c4421ceaSFande Kong   Input Parameter:
3272f6dfbefdSBarry Smith . snes - iterative context obtained from `SNESCreate()`
3273c4421ceaSFande Kong 
3274c4421ceaSFande Kong   Level: intermediate
3275c4421ceaSFande Kong 
32761cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESCreate()`, `SNESDestroy()`, `SNESReset()`
3277c4421ceaSFande Kong @*/
3278d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESConvergedReasonViewCancel(SNES snes)
3279d71ae5a4SJacob Faibussowitsch {
3280c4421ceaSFande Kong   PetscInt i;
3281c4421ceaSFande Kong 
3282c4421ceaSFande Kong   PetscFunctionBegin;
3283c4421ceaSFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3284c4421ceaSFande Kong   for (i = 0; i < snes->numberreasonviews; i++) {
328548a46eb9SPierre Jolivet     if (snes->reasonviewdestroy[i]) PetscCall((*snes->reasonviewdestroy[i])(&snes->reasonviewcontext[i]));
3286c4421ceaSFande Kong   }
3287c4421ceaSFande Kong   snes->numberreasonviews = 0;
32883ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3289c4421ceaSFande Kong }
3290c4421ceaSFande Kong 
32911fb7b255SJunchao Zhang /*@C
32929b94acceSBarry Smith   SNESDestroy - Destroys the nonlinear solver context that was created
3293f6dfbefdSBarry Smith   with `SNESCreate()`.
32949b94acceSBarry Smith 
3295c3339decSBarry Smith   Collective
3296c7afd0dbSLois Curfman McInnes 
32979b94acceSBarry Smith   Input Parameter:
3298f6dfbefdSBarry Smith . snes - the `SNES` context
32999b94acceSBarry Smith 
330036851e7fSLois Curfman McInnes   Level: beginner
330136851e7fSLois Curfman McInnes 
33021cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESCreate()`, `SNESSolve()`
33039b94acceSBarry Smith @*/
3304d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESDestroy(SNES *snes)
3305d71ae5a4SJacob Faibussowitsch {
33063a40ed3dSBarry Smith   PetscFunctionBegin;
33073ba16761SJacob Faibussowitsch   if (!*snes) PetscFunctionReturn(PETSC_SUCCESS);
33086bf464f9SBarry Smith   PetscValidHeaderSpecific((*snes), SNES_CLASSID, 1);
33099371c9d4SSatish Balay   if (--((PetscObject)(*snes))->refct > 0) {
33109371c9d4SSatish Balay     *snes = NULL;
33113ba16761SJacob Faibussowitsch     PetscFunctionReturn(PETSC_SUCCESS);
33129371c9d4SSatish Balay   }
3313d4bb536fSBarry Smith 
33149566063dSJacob Faibussowitsch   PetscCall(SNESReset((*snes)));
33159566063dSJacob Faibussowitsch   PetscCall(SNESDestroy(&(*snes)->npc));
33166b8b9a38SLisandro Dalcin 
3317e04113cfSBarry Smith   /* if memory was published with SAWs then destroy it */
33189566063dSJacob Faibussowitsch   PetscCall(PetscObjectSAWsViewOff((PetscObject)*snes));
3319dbbe0bcdSBarry Smith   PetscTryTypeMethod((*snes), destroy);
33206d4c513bSLisandro Dalcin 
33219566063dSJacob Faibussowitsch   if ((*snes)->dm) PetscCall(DMCoarsenHookRemove((*snes)->dm, DMCoarsenHook_SNESVecSol, DMRestrictHook_SNESVecSol, *snes));
33229566063dSJacob Faibussowitsch   PetscCall(DMDestroy(&(*snes)->dm));
33239566063dSJacob Faibussowitsch   PetscCall(KSPDestroy(&(*snes)->ksp));
33249566063dSJacob Faibussowitsch   PetscCall(SNESLineSearchDestroy(&(*snes)->linesearch));
33256b8b9a38SLisandro Dalcin 
33269566063dSJacob Faibussowitsch   PetscCall(PetscFree((*snes)->kspconvctx));
332748a46eb9SPierre Jolivet   if ((*snes)->ops->convergeddestroy) PetscCall((*(*snes)->ops->convergeddestroy)((*snes)->cnvP));
332848a46eb9SPierre Jolivet   if ((*snes)->conv_hist_alloc) PetscCall(PetscFree2((*snes)->conv_hist, (*snes)->conv_hist_its));
33299566063dSJacob Faibussowitsch   PetscCall(SNESMonitorCancel((*snes)));
33309566063dSJacob Faibussowitsch   PetscCall(SNESConvergedReasonViewCancel((*snes)));
33319566063dSJacob Faibussowitsch   PetscCall(PetscHeaderDestroy(snes));
33323ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
33339b94acceSBarry Smith }
33349b94acceSBarry Smith 
33359b94acceSBarry Smith /* ----------- Routines to set solver parameters ---------- */
33369b94acceSBarry Smith 
3337a8054027SBarry Smith /*@
3338a8054027SBarry Smith   SNESSetLagPreconditioner - Determines when the preconditioner is rebuilt in the nonlinear solve.
3339a8054027SBarry Smith 
3340c3339decSBarry Smith   Logically Collective
3341a8054027SBarry Smith 
3342a8054027SBarry Smith   Input Parameters:
3343f6dfbefdSBarry Smith + snes - the `SNES` context
3344d8e291bfSBarry Smith - lag  - 1 means rebuild every time the Jacobian is computed within a single nonlinear solve, 2 means every second time
33453b4f5425SBarry Smith          the Jacobian is built etc. -2 indicates rebuild preconditioner at next chance but then never rebuild after that
3346a8054027SBarry Smith 
3347a8054027SBarry Smith   Options Database Keys:
334879a4f3cfSmarkadams4 + -snes_lag_jacobian_persists <true,false>       - sets the persistence through multiple SNES solves
33493d5a8a6aSBarry Smith . -snes_lag_jacobian <-2,1,2,...>                - sets the lag
335079a4f3cfSmarkadams4 . -snes_lag_preconditioner_persists <true,false> - sets the persistence through multiple SNES solves
33513d5a8a6aSBarry Smith - -snes_lag_preconditioner <-2,1,2,...>          - sets the lag
3352a8054027SBarry Smith 
3353a8054027SBarry Smith   Notes:
3354*e4094ef1SJacob Faibussowitsch 
3355dc4c0fb0SBarry Smith   Level: intermediate
3356dc4c0fb0SBarry Smith 
3357a8054027SBarry Smith    The default is 1
3358f6dfbefdSBarry Smith    The preconditioner is ALWAYS built in the first iteration of a nonlinear solve unless lag is -1 or `SNESSetLagPreconditionerPersists()` was called
3359d8e291bfSBarry Smith 
3360f6dfbefdSBarry Smith    `SNESSetLagPreconditionerPersists()` allows using the same uniform lagging (for example every second linear solve) across multiple nonlinear solves.
3361a8054027SBarry Smith 
33621cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetTrustRegionTolerance()`, `SNESGetLagPreconditioner()`, `SNESSetLagJacobian()`, `SNESGetLagJacobian()`, `SNESSetLagPreconditionerPersists()`,
3363f6dfbefdSBarry Smith           `SNESSetLagJacobianPersists()`, `SNES`, `SNESSolve()`
3364a8054027SBarry Smith @*/
3365d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetLagPreconditioner(SNES snes, PetscInt lag)
3366d71ae5a4SJacob Faibussowitsch {
3367a8054027SBarry Smith   PetscFunctionBegin;
33680700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
33695f80ce2aSJacob Faibussowitsch   PetscCheck(lag >= -2, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Lag must be -2, -1, 1 or greater");
33705f80ce2aSJacob Faibussowitsch   PetscCheck(lag, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Lag cannot be 0");
3371c5eb9154SBarry Smith   PetscValidLogicalCollectiveInt(snes, lag, 2);
3372a8054027SBarry Smith   snes->lagpreconditioner = lag;
33733ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3374a8054027SBarry Smith }
3375a8054027SBarry Smith 
3376efd51863SBarry Smith /*@
3377f6dfbefdSBarry Smith   SNESSetGridSequence - sets the number of steps of grid sequencing that `SNES` will do
3378efd51863SBarry Smith 
3379c3339decSBarry Smith   Logically Collective
3380efd51863SBarry Smith 
3381efd51863SBarry Smith   Input Parameters:
3382f6dfbefdSBarry Smith + snes  - the `SNES` context
3383efd51863SBarry Smith - steps - the number of refinements to do, defaults to 0
3384efd51863SBarry Smith 
3385f6dfbefdSBarry Smith   Options Database Key:
338667b8a455SSatish Balay . -snes_grid_sequence <steps> - Use grid sequencing to generate initial guess
3387efd51863SBarry Smith 
3388efd51863SBarry Smith   Level: intermediate
3389efd51863SBarry Smith 
3390f6dfbefdSBarry Smith   Note:
3391f6dfbefdSBarry Smith   Use `SNESGetSolution()` to extract the fine grid solution after grid sequencing.
3392c0df2a02SJed Brown 
33931cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetTrustRegionTolerance()`, `SNESGetLagPreconditioner()`, `SNESSetLagJacobian()`, `SNESGetLagJacobian()`, `SNESGetGridSequence()`
3394efd51863SBarry Smith @*/
3395d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetGridSequence(SNES snes, PetscInt steps)
3396d71ae5a4SJacob Faibussowitsch {
3397efd51863SBarry Smith   PetscFunctionBegin;
3398efd51863SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3399efd51863SBarry Smith   PetscValidLogicalCollectiveInt(snes, steps, 2);
3400efd51863SBarry Smith   snes->gridsequence = steps;
34013ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3402efd51863SBarry Smith }
3403efd51863SBarry Smith 
3404fa19ca70SBarry Smith /*@
3405f6dfbefdSBarry Smith   SNESGetGridSequence - gets the number of steps of grid sequencing that `SNES` will do
3406fa19ca70SBarry Smith 
3407c3339decSBarry Smith   Logically Collective
3408fa19ca70SBarry Smith 
3409fa19ca70SBarry Smith   Input Parameter:
3410f6dfbefdSBarry Smith . snes - the `SNES` context
3411fa19ca70SBarry Smith 
3412fa19ca70SBarry Smith   Output Parameter:
3413fa19ca70SBarry Smith . steps - the number of refinements to do, defaults to 0
3414fa19ca70SBarry Smith 
3415f6dfbefdSBarry Smith   Options Database Key:
341667b8a455SSatish Balay . -snes_grid_sequence <steps> - set number of refinements
3417fa19ca70SBarry Smith 
3418fa19ca70SBarry Smith   Level: intermediate
3419fa19ca70SBarry Smith 
3420f6dfbefdSBarry Smith   Note:
3421f6dfbefdSBarry Smith   Use `SNESGetSolution()` to extract the fine grid solution after grid sequencing.
3422fa19ca70SBarry Smith 
34231cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetTrustRegionTolerance()`, `SNESGetLagPreconditioner()`, `SNESSetLagJacobian()`, `SNESGetLagJacobian()`, `SNESSetGridSequence()`
3424fa19ca70SBarry Smith @*/
3425d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetGridSequence(SNES snes, PetscInt *steps)
3426d71ae5a4SJacob Faibussowitsch {
3427fa19ca70SBarry Smith   PetscFunctionBegin;
3428fa19ca70SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3429fa19ca70SBarry Smith   *steps = snes->gridsequence;
34303ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3431fa19ca70SBarry Smith }
3432fa19ca70SBarry Smith 
3433a8054027SBarry Smith /*@
3434f6dfbefdSBarry Smith   SNESGetLagPreconditioner - Return how often the preconditioner is rebuilt
3435a8054027SBarry Smith 
34363f9fe445SBarry Smith   Not Collective
3437a8054027SBarry Smith 
3438a8054027SBarry Smith   Input Parameter:
3439f6dfbefdSBarry Smith . snes - the `SNES` context
3440a8054027SBarry Smith 
3441a8054027SBarry Smith   Output Parameter:
3442a8054027SBarry Smith . lag - -1 indicates NEVER rebuild, 1 means rebuild every time the Jacobian is computed within a single nonlinear solve, 2 means every second time
34433b4f5425SBarry Smith          the Jacobian is built etc. -2 indicates rebuild preconditioner at next chance but then never rebuild after that
3444a8054027SBarry Smith 
3445a8054027SBarry Smith   Options Database Keys:
344679a4f3cfSmarkadams4 + -snes_lag_jacobian_persists <true,false>       - sets the persistence through multiple SNES solves
34473d5a8a6aSBarry Smith . -snes_lag_jacobian <-2,1,2,...>                - sets the lag
344879a4f3cfSmarkadams4 . -snes_lag_preconditioner_persists <true,false> - sets the persistence through multiple SNES solves
34493d5a8a6aSBarry Smith - -snes_lag_preconditioner <-2,1,2,...>          - sets the lag
3450a8054027SBarry Smith 
3451dc4c0fb0SBarry Smith   Level: intermediate
3452dc4c0fb0SBarry Smith 
3453a8054027SBarry Smith   Notes:
3454a8054027SBarry Smith   The default is 1
3455f6dfbefdSBarry Smith 
3456a8054027SBarry Smith   The preconditioner is ALWAYS built in the first iteration of a nonlinear solve unless lag is -1
3457a8054027SBarry Smith 
34581cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetTrustRegionTolerance()`, `SNESSetLagPreconditioner()`, `SNESSetLagJacobianPersists()`, `SNESSetLagPreconditionerPersists()`
3459a8054027SBarry Smith @*/
3460d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetLagPreconditioner(SNES snes, PetscInt *lag)
3461d71ae5a4SJacob Faibussowitsch {
3462a8054027SBarry Smith   PetscFunctionBegin;
34630700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3464a8054027SBarry Smith   *lag = snes->lagpreconditioner;
34653ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3466a8054027SBarry Smith }
3467a8054027SBarry Smith 
3468e35cf81dSBarry Smith /*@
3469f6dfbefdSBarry Smith   SNESSetLagJacobian - Set when the Jacobian is rebuilt in the nonlinear solve. See `SNESSetLagPreconditioner()` for determining how
3470e35cf81dSBarry Smith   often the preconditioner is rebuilt.
3471e35cf81dSBarry Smith 
3472c3339decSBarry Smith   Logically Collective
3473e35cf81dSBarry Smith 
3474e35cf81dSBarry Smith   Input Parameters:
3475f6dfbefdSBarry Smith + snes - the `SNES` context
3476e35cf81dSBarry Smith - lag  - -1 indicates NEVER rebuild, 1 means rebuild every time the Jacobian is computed within a single nonlinear solve, 2 means every second time
3477fe3ffe1eSBarry Smith          the Jacobian is built etc. -2 means rebuild at next chance but then never again
3478e35cf81dSBarry Smith 
3479e35cf81dSBarry Smith   Options Database Keys:
348079a4f3cfSmarkadams4 + -snes_lag_jacobian_persists <true,false>       - sets the persistence through multiple SNES solves
34813d5a8a6aSBarry Smith . -snes_lag_jacobian <-2,1,2,...>                - sets the lag
348279a4f3cfSmarkadams4 . -snes_lag_preconditioner_persists <true,false> - sets the persistence through multiple SNES solves
34833d5a8a6aSBarry Smith - -snes_lag_preconditioner <-2,1,2,...>          - sets the lag.
3484e35cf81dSBarry Smith 
3485dc4c0fb0SBarry Smith   Level: intermediate
3486dc4c0fb0SBarry Smith 
3487e35cf81dSBarry Smith   Notes:
3488e35cf81dSBarry Smith   The default is 1
3489f6dfbefdSBarry Smith 
3490e35cf81dSBarry Smith   The Jacobian is ALWAYS built in the first iteration of a nonlinear solve unless lag is -1
3491f6dfbefdSBarry Smith 
3492fe3ffe1eSBarry Smith   If  -1 is used before the very first nonlinear solve the CODE WILL FAIL! because no Jacobian is used, use -2 to indicate you want it recomputed
3493fe3ffe1eSBarry Smith   at the next Newton step but never again (unless it is reset to another value)
3494e35cf81dSBarry Smith 
34951cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetTrustRegionTolerance()`, `SNESGetLagPreconditioner()`, `SNESSetLagPreconditioner()`, `SNESGetLagJacobianPersists()`, `SNESSetLagPreconditionerPersists()`
3496e35cf81dSBarry Smith @*/
3497d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetLagJacobian(SNES snes, PetscInt lag)
3498d71ae5a4SJacob Faibussowitsch {
3499e35cf81dSBarry Smith   PetscFunctionBegin;
35000700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
35015f80ce2aSJacob Faibussowitsch   PetscCheck(lag >= -2, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Lag must be -2, -1, 1 or greater");
35025f80ce2aSJacob Faibussowitsch   PetscCheck(lag, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Lag cannot be 0");
3503c5eb9154SBarry Smith   PetscValidLogicalCollectiveInt(snes, lag, 2);
3504e35cf81dSBarry Smith   snes->lagjacobian = lag;
35053ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3506e35cf81dSBarry Smith }
3507e35cf81dSBarry Smith 
3508e35cf81dSBarry Smith /*@
3509f6dfbefdSBarry Smith   SNESGetLagJacobian - Get how often the Jacobian is rebuilt. See `SNESGetLagPreconditioner()` to determine when the preconditioner is rebuilt
3510e35cf81dSBarry Smith 
35113f9fe445SBarry Smith   Not Collective
3512e35cf81dSBarry Smith 
3513e35cf81dSBarry Smith   Input Parameter:
3514f6dfbefdSBarry Smith . snes - the `SNES` context
3515e35cf81dSBarry Smith 
3516e35cf81dSBarry Smith   Output Parameter:
3517e35cf81dSBarry Smith . lag - -1 indicates NEVER rebuild, 1 means rebuild every time the Jacobian is computed within a single nonlinear solve, 2 means every second time
3518e35cf81dSBarry Smith          the Jacobian is built etc.
3519e35cf81dSBarry Smith 
3520dc4c0fb0SBarry Smith   Level: intermediate
3521dc4c0fb0SBarry Smith 
3522e35cf81dSBarry Smith   Notes:
3523e35cf81dSBarry Smith   The default is 1
3524f6dfbefdSBarry Smith 
3525f6dfbefdSBarry Smith   The jacobian is ALWAYS built in the first iteration of a nonlinear solve unless lag is -1 or `SNESSetLagJacobianPersists()` was called.
3526e35cf81dSBarry Smith 
35271cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetTrustRegionTolerance()`, `SNESSetLagJacobian()`, `SNESSetLagPreconditioner()`, `SNESGetLagPreconditioner()`, `SNESSetLagJacobianPersists()`, `SNESSetLagPreconditionerPersists()`
3528e35cf81dSBarry Smith 
3529e35cf81dSBarry Smith @*/
3530d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetLagJacobian(SNES snes, PetscInt *lag)
3531d71ae5a4SJacob Faibussowitsch {
3532e35cf81dSBarry Smith   PetscFunctionBegin;
35330700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3534e35cf81dSBarry Smith   *lag = snes->lagjacobian;
35353ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3536e35cf81dSBarry Smith }
3537e35cf81dSBarry Smith 
353837ec4e1aSPeter Brune /*@
3539f6dfbefdSBarry Smith   SNESSetLagJacobianPersists - Set whether or not the Jacobian lagging persists through multiple nonlinear solves
354037ec4e1aSPeter Brune 
3541c3339decSBarry Smith   Logically collective
354237ec4e1aSPeter Brune 
3543d8d19677SJose E. Roman   Input Parameters:
3544f6dfbefdSBarry Smith + snes - the `SNES` context
35459d7e2deaSPeter Brune - flg  - jacobian lagging persists if true
354637ec4e1aSPeter Brune 
354737ec4e1aSPeter Brune   Options Database Keys:
354879a4f3cfSmarkadams4 + -snes_lag_jacobian_persists <true,false>       - sets the persistence through multiple SNES solves
35493d5a8a6aSBarry Smith . -snes_lag_jacobian <-2,1,2,...>                - sets the lag
355079a4f3cfSmarkadams4 . -snes_lag_preconditioner_persists <true,false> - sets the persistence through multiple SNES solves
35513d5a8a6aSBarry Smith - -snes_lag_preconditioner <-2,1,2,...>          - sets the lag
35523d5a8a6aSBarry Smith 
3553dc4c0fb0SBarry Smith   Level: advanced
3554dc4c0fb0SBarry Smith 
355595452b02SPatrick Sanan   Notes:
3556f6dfbefdSBarry Smith   Normally when `SNESSetLagJacobian()` is used, the Jacobian is always rebuilt at the beginning of each new nonlinear solve, this removes that.
3557f6dfbefdSBarry Smith 
355895452b02SPatrick Sanan   This is useful both for nonlinear preconditioning, where it's appropriate to have the Jacobian be stale by
355937ec4e1aSPeter Brune   several solves, and for implicit time-stepping, where Jacobian lagging in the inner nonlinear solve over several
356037ec4e1aSPeter Brune   timesteps may present huge efficiency gains.
356137ec4e1aSPeter Brune 
3562*e4094ef1SJacob Faibussowitsch .seealso: [](ch_snes), `SNES`, `SNESSetLagPreconditionerPersists()`, `SNESSetLagJacobian()`, `SNESGetLagJacobian()`, `SNESGetNPC()`, `SNESSetLagJacobianPersists()`
356337ec4e1aSPeter Brune @*/
3564d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetLagJacobianPersists(SNES snes, PetscBool flg)
3565d71ae5a4SJacob Faibussowitsch {
356637ec4e1aSPeter Brune   PetscFunctionBegin;
356737ec4e1aSPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
356837ec4e1aSPeter Brune   PetscValidLogicalCollectiveBool(snes, flg, 2);
356937ec4e1aSPeter Brune   snes->lagjac_persist = flg;
35703ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
357137ec4e1aSPeter Brune }
357237ec4e1aSPeter Brune 
357337ec4e1aSPeter Brune /*@
3574d8e291bfSBarry Smith   SNESSetLagPreconditionerPersists - Set whether or not the preconditioner lagging persists through multiple nonlinear solves
357537ec4e1aSPeter Brune 
3576c3339decSBarry Smith   Logically Collective
357737ec4e1aSPeter Brune 
3578d8d19677SJose E. Roman   Input Parameters:
3579f6dfbefdSBarry Smith + snes - the `SNES` context
35809d7e2deaSPeter Brune - flg  - preconditioner lagging persists if true
358137ec4e1aSPeter Brune 
358237ec4e1aSPeter Brune   Options Database Keys:
358379a4f3cfSmarkadams4 + -snes_lag_jacobian_persists <true,false>       - sets the persistence through multiple SNES solves
35843d5a8a6aSBarry Smith . -snes_lag_jacobian <-2,1,2,...>                - sets the lag
358579a4f3cfSmarkadams4 . -snes_lag_preconditioner_persists <true,false> - sets the persistence through multiple SNES solves
35863d5a8a6aSBarry Smith - -snes_lag_preconditioner <-2,1,2,...>          - sets the lag
358737ec4e1aSPeter Brune 
3588dc4c0fb0SBarry Smith   Level: developer
3589dc4c0fb0SBarry Smith 
359095452b02SPatrick Sanan   Notes:
3591f6dfbefdSBarry Smith   Normally when `SNESSetLagPreconditioner()` is used, the preconditioner is always rebuilt at the beginning of each new nonlinear solve, this removes that.
3592f6dfbefdSBarry Smith 
359395452b02SPatrick Sanan   This is useful both for nonlinear preconditioning, where it's appropriate to have the preconditioner be stale
359437ec4e1aSPeter Brune   by several solves, and for implicit time-stepping, where preconditioner lagging in the inner nonlinear solve over
359537ec4e1aSPeter Brune   several timesteps may present huge efficiency gains.
359637ec4e1aSPeter Brune 
35971cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetLagJacobianPersists()`, `SNESSetLagJacobian()`, `SNESGetLagJacobian()`, `SNESGetNPC()`, `SNESSetLagPreconditioner()`
359837ec4e1aSPeter Brune @*/
3599d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetLagPreconditionerPersists(SNES snes, PetscBool flg)
3600d71ae5a4SJacob Faibussowitsch {
360137ec4e1aSPeter Brune   PetscFunctionBegin;
360237ec4e1aSPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
360337ec4e1aSPeter Brune   PetscValidLogicalCollectiveBool(snes, flg, 2);
360437ec4e1aSPeter Brune   snes->lagpre_persist = flg;
36053ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
360637ec4e1aSPeter Brune }
360737ec4e1aSPeter Brune 
36089b94acceSBarry Smith /*@
3609f6dfbefdSBarry Smith   SNESSetForceIteration - force `SNESSolve()` to take at least one iteration regardless of the initial residual norm
3610be5caee7SBarry Smith 
3611c3339decSBarry Smith   Logically Collective
3612be5caee7SBarry Smith 
3613be5caee7SBarry Smith   Input Parameters:
3614f6dfbefdSBarry Smith + snes  - the `SNES` context
3615f6dfbefdSBarry Smith - force - `PETSC_TRUE` require at least one iteration
3616be5caee7SBarry Smith 
3617f6dfbefdSBarry Smith   Options Database Key:
3618be5caee7SBarry Smith . -snes_force_iteration <force> - Sets forcing an iteration
3619be5caee7SBarry Smith 
3620dc4c0fb0SBarry Smith   Level: intermediate
3621dc4c0fb0SBarry Smith 
3622f6dfbefdSBarry Smith   Note:
3623f6dfbefdSBarry Smith   This is used sometimes with `TS` to prevent `TS` from detecting a false steady state solution
3624be5caee7SBarry Smith 
36251cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `TS`, `SNESSetTrustRegionTolerance()`, `SNESSetDivergenceTolerance()`
3626be5caee7SBarry Smith @*/
3627d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetForceIteration(SNES snes, PetscBool force)
3628d71ae5a4SJacob Faibussowitsch {
3629be5caee7SBarry Smith   PetscFunctionBegin;
3630be5caee7SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3631be5caee7SBarry Smith   snes->forceiteration = force;
36323ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3633be5caee7SBarry Smith }
3634be5caee7SBarry Smith 
363585216dc7SFande Kong /*@
3636f6dfbefdSBarry Smith   SNESGetForceIteration - Check whether or not `SNESSolve()` take at least one iteration regardless of the initial residual norm
363785216dc7SFande Kong 
3638c3339decSBarry Smith   Logically Collective
363985216dc7SFande Kong 
36402fe279fdSBarry Smith   Input Parameter:
3641f6dfbefdSBarry Smith . snes - the `SNES` context
364285216dc7SFande Kong 
364385216dc7SFande Kong   Output Parameter:
3644dc4c0fb0SBarry Smith . force - `PETSC_TRUE` requires at least one iteration.
364585216dc7SFande Kong 
364606dd6b0eSSatish Balay   Level: intermediate
364706dd6b0eSSatish Balay 
36481cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetForceIteration()`, `SNESSetTrustRegionTolerance()`, `SNESSetDivergenceTolerance()`
364985216dc7SFande Kong @*/
3650d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetForceIteration(SNES snes, PetscBool *force)
3651d71ae5a4SJacob Faibussowitsch {
365285216dc7SFande Kong   PetscFunctionBegin;
365385216dc7SFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
365485216dc7SFande Kong   *force = snes->forceiteration;
36553ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
365685216dc7SFande Kong }
3657be5caee7SBarry Smith 
3658be5caee7SBarry Smith /*@
3659f6dfbefdSBarry Smith   SNESSetTolerances - Sets `SNES` various parameters used in convergence tests.
36609b94acceSBarry Smith 
3661c3339decSBarry Smith   Logically Collective
3662c7afd0dbSLois Curfman McInnes 
36639b94acceSBarry Smith   Input Parameters:
3664f6dfbefdSBarry Smith + snes   - the `SNES` context
366570441072SBarry Smith . abstol - absolute convergence tolerance
366633174efeSLois Curfman McInnes . rtol   - relative convergence tolerance
36675358d0d4SBarry Smith . stol   - convergence tolerance in terms of the norm of the change in the solution between steps,  || delta x || < stol*|| x ||
3668f6dfbefdSBarry Smith . maxit  - maximum number of iterations, default 50.
3669f6dfbefdSBarry Smith - maxf   - maximum number of function evaluations (-1 indicates no limit), default 1000
3670fee21e36SBarry Smith 
367133174efeSLois Curfman McInnes   Options Database Keys:
367270441072SBarry Smith + -snes_atol <abstol>    - Sets abstol
3673c7afd0dbSLois Curfman McInnes . -snes_rtol <rtol>      - Sets rtol
3674c7afd0dbSLois Curfman McInnes . -snes_stol <stol>      - Sets stol
3675c7afd0dbSLois Curfman McInnes . -snes_max_it <maxit>   - Sets maxit
3676c7afd0dbSLois Curfman McInnes - -snes_max_funcs <maxf> - Sets maxf
36779b94acceSBarry Smith 
367836851e7fSLois Curfman McInnes   Level: intermediate
367936851e7fSLois Curfman McInnes 
36801cc06b55SBarry Smith .seealso: [](ch_snes), `SNESolve()`, `SNES`, `SNESSetTrustRegionTolerance()`, `SNESSetDivergenceTolerance()`, `SNESSetForceIteration()`
36819b94acceSBarry Smith @*/
3682d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetTolerances(SNES snes, PetscReal abstol, PetscReal rtol, PetscReal stol, PetscInt maxit, PetscInt maxf)
3683d71ae5a4SJacob Faibussowitsch {
36843a40ed3dSBarry Smith   PetscFunctionBegin;
36850700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3686c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, abstol, 2);
3687c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, rtol, 3);
3688c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, stol, 4);
3689c5eb9154SBarry Smith   PetscValidLogicalCollectiveInt(snes, maxit, 5);
3690c5eb9154SBarry Smith   PetscValidLogicalCollectiveInt(snes, maxf, 6);
3691c5eb9154SBarry Smith 
369213bcc0bdSJacob Faibussowitsch   if (abstol != (PetscReal)PETSC_DEFAULT) {
36935f80ce2aSJacob Faibussowitsch     PetscCheck(abstol >= 0.0, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_OUTOFRANGE, "Absolute tolerance %g must be non-negative", (double)abstol);
3694ab54825eSJed Brown     snes->abstol = abstol;
3695ab54825eSJed Brown   }
369613bcc0bdSJacob Faibussowitsch   if (rtol != (PetscReal)PETSC_DEFAULT) {
36975f80ce2aSJacob Faibussowitsch     PetscCheck(rtol >= 0.0 && 1.0 > rtol, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_OUTOFRANGE, "Relative tolerance %g must be non-negative and less than 1.0", (double)rtol);
3698ab54825eSJed Brown     snes->rtol = rtol;
3699ab54825eSJed Brown   }
370013bcc0bdSJacob Faibussowitsch   if (stol != (PetscReal)PETSC_DEFAULT) {
37015f80ce2aSJacob Faibussowitsch     PetscCheck(stol >= 0.0, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_OUTOFRANGE, "Step tolerance %g must be non-negative", (double)stol);
3702c60f73f4SPeter Brune     snes->stol = stol;
3703ab54825eSJed Brown   }
3704ab54825eSJed Brown   if (maxit != PETSC_DEFAULT) {
370563a3b9bcSJacob Faibussowitsch     PetscCheck(maxit >= 0, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_OUTOFRANGE, "Maximum number of iterations %" PetscInt_FMT " must be non-negative", maxit);
3706ab54825eSJed Brown     snes->max_its = maxit;
3707ab54825eSJed Brown   }
3708ab54825eSJed Brown   if (maxf != PETSC_DEFAULT) {
370963a3b9bcSJacob Faibussowitsch     PetscCheck(maxf >= -1, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_OUTOFRANGE, "Maximum number of function evaluations %" PetscInt_FMT " must be -1 or nonnegative", maxf);
3710ab54825eSJed Brown     snes->max_funcs = maxf;
3711ab54825eSJed Brown   }
371288976e71SPeter Brune   snes->tolerancesset = PETSC_TRUE;
37133ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
37149b94acceSBarry Smith }
37159b94acceSBarry Smith 
3716e4d06f11SPatrick Farrell /*@
3717f6dfbefdSBarry Smith   SNESSetDivergenceTolerance - Sets the divergence tolerance used for the `SNES` divergence test.
3718e4d06f11SPatrick Farrell 
3719c3339decSBarry Smith   Logically Collective
3720e4d06f11SPatrick Farrell 
3721e4d06f11SPatrick Farrell   Input Parameters:
3722f6dfbefdSBarry Smith + snes   - the `SNES` context
3723f6dfbefdSBarry Smith - divtol - the divergence tolerance. Use -1 to deactivate the test, default is 1e4
3724e4d06f11SPatrick Farrell 
3725f6dfbefdSBarry Smith   Options Database Key:
3726dc4c0fb0SBarry Smith . -snes_divergence_tolerance <divtol> - Sets `divtol`
3727e4d06f11SPatrick Farrell 
3728e4d06f11SPatrick Farrell   Level: intermediate
3729e4d06f11SPatrick Farrell 
37301cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetTolerances()`, `SNESGetDivergenceTolerance`
3731e4d06f11SPatrick Farrell @*/
3732d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetDivergenceTolerance(SNES snes, PetscReal divtol)
3733d71ae5a4SJacob Faibussowitsch {
3734e4d06f11SPatrick Farrell   PetscFunctionBegin;
3735e4d06f11SPatrick Farrell   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3736e4d06f11SPatrick Farrell   PetscValidLogicalCollectiveReal(snes, divtol, 2);
3737e4d06f11SPatrick Farrell 
373813bcc0bdSJacob Faibussowitsch   if (divtol != (PetscReal)PETSC_DEFAULT) {
3739e4d06f11SPatrick Farrell     snes->divtol = divtol;
37409371c9d4SSatish Balay   } else {
3741e4d06f11SPatrick Farrell     snes->divtol = 1.0e4;
3742e4d06f11SPatrick Farrell   }
37433ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3744e4d06f11SPatrick Farrell }
3745e4d06f11SPatrick Farrell 
37469b94acceSBarry Smith /*@
374733174efeSLois Curfman McInnes   SNESGetTolerances - Gets various parameters used in convergence tests.
374833174efeSLois Curfman McInnes 
3749c7afd0dbSLois Curfman McInnes   Not Collective
3750c7afd0dbSLois Curfman McInnes 
375133174efeSLois Curfman McInnes   Input Parameters:
3752f6dfbefdSBarry Smith + snes  - the `SNES` context
375385385478SLisandro Dalcin . atol  - absolute convergence tolerance
375433174efeSLois Curfman McInnes . rtol  - relative convergence tolerance
375533174efeSLois Curfman McInnes . stol  - convergence tolerance in terms of the norm
375633174efeSLois Curfman McInnes            of the change in the solution between steps
375733174efeSLois Curfman McInnes . maxit - maximum number of iterations
3758c7afd0dbSLois Curfman McInnes - maxf  - maximum number of function evaluations
3759fee21e36SBarry Smith 
376036851e7fSLois Curfman McInnes   Level: intermediate
376136851e7fSLois Curfman McInnes 
3762dc4c0fb0SBarry Smith   Note:
3763dc4c0fb0SBarry Smith   The user can specify `NULL` for any parameter that is not needed.
3764dc4c0fb0SBarry Smith 
37651cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetTolerances()`
376633174efeSLois Curfman McInnes @*/
3767d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetTolerances(SNES snes, PetscReal *atol, PetscReal *rtol, PetscReal *stol, PetscInt *maxit, PetscInt *maxf)
3768d71ae5a4SJacob Faibussowitsch {
37693a40ed3dSBarry Smith   PetscFunctionBegin;
37700700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
377185385478SLisandro Dalcin   if (atol) *atol = snes->abstol;
377233174efeSLois Curfman McInnes   if (rtol) *rtol = snes->rtol;
3773c60f73f4SPeter Brune   if (stol) *stol = snes->stol;
377433174efeSLois Curfman McInnes   if (maxit) *maxit = snes->max_its;
377533174efeSLois Curfman McInnes   if (maxf) *maxf = snes->max_funcs;
37763ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
377733174efeSLois Curfman McInnes }
377833174efeSLois Curfman McInnes 
3779e4d06f11SPatrick Farrell /*@
3780e4d06f11SPatrick Farrell   SNESGetDivergenceTolerance - Gets divergence tolerance used in divergence test.
3781e4d06f11SPatrick Farrell 
3782e4d06f11SPatrick Farrell   Not Collective
3783e4d06f11SPatrick Farrell 
3784e4d06f11SPatrick Farrell   Input Parameters:
3785f6dfbefdSBarry Smith + snes   - the `SNES` context
3786e4d06f11SPatrick Farrell - divtol - divergence tolerance
3787e4d06f11SPatrick Farrell 
3788e4d06f11SPatrick Farrell   Level: intermediate
3789e4d06f11SPatrick Farrell 
37901cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetDivergenceTolerance()`
3791e4d06f11SPatrick Farrell @*/
3792d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetDivergenceTolerance(SNES snes, PetscReal *divtol)
3793d71ae5a4SJacob Faibussowitsch {
3794e4d06f11SPatrick Farrell   PetscFunctionBegin;
3795e4d06f11SPatrick Farrell   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3796e4d06f11SPatrick Farrell   if (divtol) *divtol = snes->divtol;
37973ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3798e4d06f11SPatrick Farrell }
3799e4d06f11SPatrick Farrell 
380033174efeSLois Curfman McInnes /*@
38019b94acceSBarry Smith   SNESSetTrustRegionTolerance - Sets the trust region parameter tolerance.
38029b94acceSBarry Smith 
3803c3339decSBarry Smith   Logically Collective
3804fee21e36SBarry Smith 
3805c7afd0dbSLois Curfman McInnes   Input Parameters:
3806f6dfbefdSBarry Smith + snes - the `SNES` context
3807c7afd0dbSLois Curfman McInnes - tol  - tolerance
3808c7afd0dbSLois Curfman McInnes 
38099b94acceSBarry Smith   Options Database Key:
38104a221d59SStefano Zampini . -snes_tr_tol <tol> - Sets tol
38119b94acceSBarry Smith 
381236851e7fSLois Curfman McInnes   Level: intermediate
381336851e7fSLois Curfman McInnes 
38141cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESNEWTONTR`, `SNESSetTolerances()`
38159b94acceSBarry Smith @*/
3816d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetTrustRegionTolerance(SNES snes, PetscReal tol)
3817d71ae5a4SJacob Faibussowitsch {
38183a40ed3dSBarry Smith   PetscFunctionBegin;
38190700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3820c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, tol, 2);
38219b94acceSBarry Smith   snes->deltatol = tol;
38223ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
38239b94acceSBarry Smith }
38249b94acceSBarry Smith 
38256ba87a44SLisandro Dalcin PETSC_INTERN PetscErrorCode SNESMonitorRange_Private(SNES, PetscInt, PetscReal *);
38266ba87a44SLisandro Dalcin 
3827d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESMonitorLGRange(SNES snes, PetscInt n, PetscReal rnorm, void *monctx)
3828d71ae5a4SJacob Faibussowitsch {
3829b271bb04SBarry Smith   PetscDrawLG      lg;
3830b271bb04SBarry Smith   PetscReal        x, y, per;
3831b271bb04SBarry Smith   PetscViewer      v = (PetscViewer)monctx;
3832b271bb04SBarry Smith   static PetscReal prev; /* should be in the context */
3833b271bb04SBarry Smith   PetscDraw        draw;
3834b271bb04SBarry Smith 
3835459f5d12SBarry Smith   PetscFunctionBegin;
38364d4332d5SBarry Smith   PetscValidHeaderSpecific(v, PETSC_VIEWER_CLASSID, 4);
38379566063dSJacob Faibussowitsch   PetscCall(PetscViewerDrawGetDrawLG(v, 0, &lg));
38389566063dSJacob Faibussowitsch   if (!n) PetscCall(PetscDrawLGReset(lg));
38399566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGGetDraw(lg, &draw));
38409566063dSJacob Faibussowitsch   PetscCall(PetscDrawSetTitle(draw, "Residual norm"));
3841b271bb04SBarry Smith   x = (PetscReal)n;
384277b4d14cSPeter Brune   if (rnorm > 0.0) y = PetscLog10Real(rnorm);
384394c9c6d3SKarl Rupp   else y = -15.0;
38449566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGAddPoint(lg, &x, &y));
38456934998bSLisandro Dalcin   if (n < 20 || !(n % 5) || snes->reason) {
38469566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGDraw(lg));
38479566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGSave(lg));
3848b271bb04SBarry Smith   }
3849b271bb04SBarry Smith 
38509566063dSJacob Faibussowitsch   PetscCall(PetscViewerDrawGetDrawLG(v, 1, &lg));
38519566063dSJacob Faibussowitsch   if (!n) PetscCall(PetscDrawLGReset(lg));
38529566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGGetDraw(lg, &draw));
3853aaa8cc7dSPierre Jolivet   PetscCall(PetscDrawSetTitle(draw, "% elements > .2*max element"));
38549566063dSJacob Faibussowitsch   PetscCall(SNESMonitorRange_Private(snes, n, &per));
3855b271bb04SBarry Smith   x = (PetscReal)n;
3856b271bb04SBarry Smith   y = 100.0 * per;
38579566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGAddPoint(lg, &x, &y));
38586934998bSLisandro Dalcin   if (n < 20 || !(n % 5) || snes->reason) {
38599566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGDraw(lg));
38609566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGSave(lg));
3861b271bb04SBarry Smith   }
3862b271bb04SBarry Smith 
38639566063dSJacob Faibussowitsch   PetscCall(PetscViewerDrawGetDrawLG(v, 2, &lg));
38649371c9d4SSatish Balay   if (!n) {
38659371c9d4SSatish Balay     prev = rnorm;
38669371c9d4SSatish Balay     PetscCall(PetscDrawLGReset(lg));
38679371c9d4SSatish Balay   }
38689566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGGetDraw(lg, &draw));
38699566063dSJacob Faibussowitsch   PetscCall(PetscDrawSetTitle(draw, "(norm -oldnorm)/oldnorm"));
3870b271bb04SBarry Smith   x = (PetscReal)n;
3871b271bb04SBarry Smith   y = (prev - rnorm) / prev;
38729566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGAddPoint(lg, &x, &y));
38736934998bSLisandro Dalcin   if (n < 20 || !(n % 5) || snes->reason) {
38749566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGDraw(lg));
38759566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGSave(lg));
3876b271bb04SBarry Smith   }
3877b271bb04SBarry Smith 
38789566063dSJacob Faibussowitsch   PetscCall(PetscViewerDrawGetDrawLG(v, 3, &lg));
38799566063dSJacob Faibussowitsch   if (!n) PetscCall(PetscDrawLGReset(lg));
38809566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGGetDraw(lg, &draw));
38819566063dSJacob Faibussowitsch   PetscCall(PetscDrawSetTitle(draw, "(norm -oldnorm)/oldnorm*(% > .2 max)"));
3882b271bb04SBarry Smith   x = (PetscReal)n;
3883b271bb04SBarry Smith   y = (prev - rnorm) / (prev * per);
3884b271bb04SBarry Smith   if (n > 2) { /*skip initial crazy value */
38859566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGAddPoint(lg, &x, &y));
3886b271bb04SBarry Smith   }
38876934998bSLisandro Dalcin   if (n < 20 || !(n % 5) || snes->reason) {
38889566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGDraw(lg));
38899566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGSave(lg));
3890b271bb04SBarry Smith   }
3891b271bb04SBarry Smith   prev = rnorm;
38923ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3893b271bb04SBarry Smith }
3894b271bb04SBarry Smith 
3895228d79bcSJed Brown /*@
38962d157150SStefano Zampini   SNESConverged - Run the convergence test and update the `SNESConvergedReason`.
38972d157150SStefano Zampini 
38982d157150SStefano Zampini   Collective
38992d157150SStefano Zampini 
39002d157150SStefano Zampini   Input Parameters:
39012d157150SStefano Zampini + snes  - the `SNES` context
39022d157150SStefano Zampini . it    - current iteration
39032d157150SStefano Zampini . xnorm - 2-norm of current iterate
39042d157150SStefano Zampini . snorm - 2-norm of current step
39052d157150SStefano Zampini - fnorm - 2-norm of function
39062d157150SStefano Zampini 
39072d157150SStefano Zampini   Level: developer
39082d157150SStefano Zampini 
39092d157150SStefano Zampini   Note:
39102d157150SStefano Zampini   This routine is called by the `SNES` implementations.
39112d157150SStefano Zampini   It does not typically need to be called by the user.
39122d157150SStefano Zampini 
3913be50c303SSatish Balay .seealso: [](ch_snes), `SNES`, `SNESSolve`, `SNESSetConvergenceTest()`, `SNESGetConvergenceTest()`
39142d157150SStefano Zampini @*/
39152d157150SStefano Zampini PetscErrorCode SNESConverged(SNES snes, PetscInt it, PetscReal xnorm, PetscReal snorm, PetscReal fnorm)
39162d157150SStefano Zampini {
39172d157150SStefano Zampini   PetscFunctionBegin;
39182d157150SStefano Zampini   if (!snes->reason) {
39192d157150SStefano Zampini     if (snes->normschedule == SNES_NORM_ALWAYS) PetscUseTypeMethod(snes, converged, it, xnorm, snorm, fnorm, &snes->reason, snes->cnvP);
39202d157150SStefano Zampini     if (it == snes->max_its && !snes->reason) {
39212d157150SStefano Zampini       if (snes->normschedule == SNES_NORM_ALWAYS) {
39222d157150SStefano Zampini         PetscCall(PetscInfo(snes, "Maximum number of iterations has been reached: %" PetscInt_FMT "\n", snes->max_its));
39232d157150SStefano Zampini         snes->reason = SNES_DIVERGED_MAX_IT;
39242d157150SStefano Zampini       } else snes->reason = SNES_CONVERGED_ITS;
39252d157150SStefano Zampini     }
39262d157150SStefano Zampini   }
39272d157150SStefano Zampini   PetscFunctionReturn(PETSC_SUCCESS);
39282d157150SStefano Zampini }
39292d157150SStefano Zampini 
39302d157150SStefano Zampini /*@
3931228d79bcSJed Brown   SNESMonitor - runs the user provided monitor routines, if they exist
3932228d79bcSJed Brown 
3933c3339decSBarry Smith   Collective
3934228d79bcSJed Brown 
3935228d79bcSJed Brown   Input Parameters:
3936f6dfbefdSBarry Smith + snes  - nonlinear solver context obtained from `SNESCreate()`
3937228d79bcSJed Brown . iter  - iteration number
3938228d79bcSJed Brown - rnorm - relative norm of the residual
3939228d79bcSJed Brown 
3940dc4c0fb0SBarry Smith   Level: developer
3941dc4c0fb0SBarry Smith 
3942f6dfbefdSBarry Smith   Note:
3943f6dfbefdSBarry Smith   This routine is called by the `SNES` implementations.
3944228d79bcSJed Brown   It does not typically need to be called by the user.
3945228d79bcSJed Brown 
39461cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESMonitorSet()`
3947228d79bcSJed Brown @*/
3948d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESMonitor(SNES snes, PetscInt iter, PetscReal rnorm)
3949d71ae5a4SJacob Faibussowitsch {
39507a03ce2fSLisandro Dalcin   PetscInt i, n = snes->numbermonitors;
39517a03ce2fSLisandro Dalcin 
39527a03ce2fSLisandro Dalcin   PetscFunctionBegin;
39539566063dSJacob Faibussowitsch   PetscCall(VecLockReadPush(snes->vec_sol));
395448a46eb9SPierre Jolivet   for (i = 0; i < n; i++) PetscCall((*snes->monitor[i])(snes, iter, rnorm, snes->monitorcontext[i]));
39559566063dSJacob Faibussowitsch   PetscCall(VecLockReadPop(snes->vec_sol));
39563ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
39577a03ce2fSLisandro Dalcin }
39587a03ce2fSLisandro Dalcin 
39599b94acceSBarry Smith /* ------------ Routines to set performance monitoring options ----------- */
39609b94acceSBarry Smith 
3961bf388a1fSBarry Smith /*MC
3962f6dfbefdSBarry Smith     SNESMonitorFunction - functional form passed to `SNESMonitorSet()` to monitor convergence of nonlinear solver
3963bf388a1fSBarry Smith 
3964bf388a1fSBarry Smith      Synopsis:
3965aaa7dc30SBarry Smith      #include <petscsnes.h>
396637fdd005SBarry Smith     PetscErrorCode SNESMonitorFunction(SNES snes, PetscInt its, PetscReal norm, void *mctx)
3967bf388a1fSBarry Smith 
3968c3339decSBarry Smith      Collective
39691843f636SBarry Smith 
39701843f636SBarry Smith     Input Parameters:
3971f6dfbefdSBarry Smith +    snes - the `SNES` context
3972bf388a1fSBarry Smith .    its - iteration number
3973bf388a1fSBarry Smith .    norm - 2-norm function value (may be estimated)
3974bf388a1fSBarry Smith -    mctx - [optional] monitoring context
3975bf388a1fSBarry Smith 
3976878cb397SSatish Balay    Level: advanced
3977878cb397SSatish Balay 
39781cc06b55SBarry Smith .seealso: [](ch_snes), `SNESMonitorSet()`, `SNESMonitorSet()`, `SNESMonitorGet()`
3979bf388a1fSBarry Smith M*/
3980bf388a1fSBarry Smith 
39819b94acceSBarry Smith /*@C
3982a6570f20SBarry Smith   SNESMonitorSet - Sets an ADDITIONAL function that is to be used at every
39839b94acceSBarry Smith   iteration of the nonlinear solver to display the iteration's
39849b94acceSBarry Smith   progress.
39859b94acceSBarry Smith 
3986c3339decSBarry Smith   Logically Collective
3987fee21e36SBarry Smith 
3988c7afd0dbSLois Curfman McInnes   Input Parameters:
3989f6dfbefdSBarry Smith + snes           - the `SNES` context
399020f4b53cSBarry Smith . f              - the monitor function,  for the calling sequence see `SNESMonitorFunction`
3991b8a78c4aSBarry Smith . mctx           - [optional] user-defined context for private data for the
3992dc4c0fb0SBarry Smith           monitor routine (use `NULL` if no context is desired)
3993dc4c0fb0SBarry Smith - monitordestroy - [optional] routine that frees monitor context (may be `NULL`)
39949b94acceSBarry Smith 
39959665c990SLois Curfman McInnes   Options Database Keys:
3996f6dfbefdSBarry Smith + -snes_monitor               - sets `SNESMonitorDefault()`
3997798534f6SMatthew G. Knepley . -snes_monitor draw::draw_lg - sets line graph monitor,
3998dc4c0fb0SBarry Smith - -snes_monitor_cancel        - cancels all monitors that have been hardwired into a code by calls to `SNESMonitorSet()`, but does not cancel those set via
3999c7afd0dbSLois Curfman McInnes                             the options database.
40009665c990SLois Curfman McInnes 
4001dc4c0fb0SBarry Smith   Level: intermediate
4002dc4c0fb0SBarry Smith 
4003f6dfbefdSBarry Smith   Note:
40046bc08f3fSLois Curfman McInnes   Several different monitoring routines may be set by calling
4005f6dfbefdSBarry Smith   `SNESMonitorSet()` multiple times; all will be called in the
40066bc08f3fSLois Curfman McInnes   order in which they were set.
4007639f9d9dSBarry Smith 
4008*e4094ef1SJacob Faibussowitsch   Fortran Notes:
4009f6dfbefdSBarry Smith   Only a single monitor function can be set for each `SNES` object
4010025f1a04SBarry Smith 
40111cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESMonitorDefault()`, `SNESMonitorCancel()`, `SNESMonitorFunction`
40129b94acceSBarry Smith @*/
4013d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESMonitorSet(SNES snes, PetscErrorCode (*f)(SNES, PetscInt, PetscReal, void *), void *mctx, PetscErrorCode (*monitordestroy)(void **))
4014d71ae5a4SJacob Faibussowitsch {
4015b90d0a6eSBarry Smith   PetscInt  i;
401678064530SBarry Smith   PetscBool identical;
4017b90d0a6eSBarry Smith 
40183a40ed3dSBarry Smith   PetscFunctionBegin;
40190700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4020b90d0a6eSBarry Smith   for (i = 0; i < snes->numbermonitors; i++) {
40219566063dSJacob Faibussowitsch     PetscCall(PetscMonitorCompare((PetscErrorCode(*)(void))f, mctx, monitordestroy, (PetscErrorCode(*)(void))snes->monitor[i], snes->monitorcontext[i], snes->monitordestroy[i], &identical));
40223ba16761SJacob Faibussowitsch     if (identical) PetscFunctionReturn(PETSC_SUCCESS);
4023649052a6SBarry Smith   }
40245f80ce2aSJacob Faibussowitsch   PetscCheck(snes->numbermonitors < MAXSNESMONITORS, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Too many monitors set");
40256e4dcb14SBarry Smith   snes->monitor[snes->numbermonitors]          = f;
4026b8a78c4aSBarry Smith   snes->monitordestroy[snes->numbermonitors]   = monitordestroy;
4027639f9d9dSBarry Smith   snes->monitorcontext[snes->numbermonitors++] = (void *)mctx;
40283ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
40299b94acceSBarry Smith }
40309b94acceSBarry Smith 
4031a278d85bSSatish Balay /*@
4032f6dfbefdSBarry Smith   SNESMonitorCancel - Clears all the monitor functions for a `SNES` object.
40335cd90555SBarry Smith 
4034c3339decSBarry Smith   Logically Collective
4035c7afd0dbSLois Curfman McInnes 
40362fe279fdSBarry Smith   Input Parameter:
4037f6dfbefdSBarry Smith . snes - the `SNES` context
40385cd90555SBarry Smith 
40391a480d89SAdministrator   Options Database Key:
4040a6570f20SBarry Smith . -snes_monitor_cancel - cancels all monitors that have been hardwired
4041dc4c0fb0SBarry Smith     into a code by calls to `SNESMonitorSet()`, but does not cancel those
4042c7afd0dbSLois Curfman McInnes     set via the options database
40435cd90555SBarry Smith 
4044dc4c0fb0SBarry Smith   Level: intermediate
4045dc4c0fb0SBarry Smith 
4046f6dfbefdSBarry Smith   Note:
4047f6dfbefdSBarry Smith   There is no way to clear one specific monitor from a `SNES` object.
40485cd90555SBarry Smith 
40491cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESMonitorGet()`, `SNESMonitorDefault()`, `SNESMonitorSet()`
40505cd90555SBarry Smith @*/
4051d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESMonitorCancel(SNES snes)
4052d71ae5a4SJacob Faibussowitsch {
4053d952e501SBarry Smith   PetscInt i;
4054d952e501SBarry Smith 
40555cd90555SBarry Smith   PetscFunctionBegin;
40560700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4057d952e501SBarry Smith   for (i = 0; i < snes->numbermonitors; i++) {
405848a46eb9SPierre Jolivet     if (snes->monitordestroy[i]) PetscCall((*snes->monitordestroy[i])(&snes->monitorcontext[i]));
4059d952e501SBarry Smith   }
40605cd90555SBarry Smith   snes->numbermonitors = 0;
40613ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
40625cd90555SBarry Smith }
40635cd90555SBarry Smith 
4064bf388a1fSBarry Smith /*MC
4065bf388a1fSBarry Smith     SNESConvergenceTestFunction - functional form used for testing of convergence of nonlinear solver
4066bf388a1fSBarry Smith 
4067bf388a1fSBarry Smith      Synopsis:
4068aaa7dc30SBarry Smith      #include <petscsnes.h>
406937fdd005SBarry Smith      PetscErrorCode SNESConvergenceTest(SNES snes, PetscInt it, PetscReal xnorm, PetscReal gnorm, PetscReal f, SNESConvergedReason *reason, void *cctx)
4070bf388a1fSBarry Smith 
4071c3339decSBarry Smith      Collective
40721843f636SBarry Smith 
40731843f636SBarry Smith     Input Parameters:
4074f6dfbefdSBarry Smith +    snes - the `SNES` context
4075bf388a1fSBarry Smith .    it - current iteration (0 is the first and is before any Newton step)
4076bf388a1fSBarry Smith .    xnorm - 2-norm of current iterate
4077bf388a1fSBarry Smith .    gnorm - 2-norm of current step
40781843f636SBarry Smith .    f - 2-norm of function
40791843f636SBarry Smith -    cctx - [optional] convergence context
40801843f636SBarry Smith 
40811843f636SBarry Smith     Output Parameter:
40821843f636SBarry Smith .    reason - reason for convergence/divergence, only needs to be set when convergence or divergence is detected
4083bf388a1fSBarry Smith 
4084878cb397SSatish Balay    Level: intermediate
4085bf388a1fSBarry Smith 
40861cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve`, `SNESSetConvergenceTest()`, `SNESGetConvergenceTest()`
4087bf388a1fSBarry Smith M*/
4088bf388a1fSBarry Smith 
40899b94acceSBarry Smith /*@C
40909b94acceSBarry Smith   SNESSetConvergenceTest - Sets the function that is to be used
40919b94acceSBarry Smith   to test for convergence of the nonlinear iterative solution.
40929b94acceSBarry Smith 
4093c3339decSBarry Smith   Logically Collective
4094fee21e36SBarry Smith 
4095c7afd0dbSLois Curfman McInnes   Input Parameters:
4096f6dfbefdSBarry Smith + snes                        - the `SNES` context
4097*e4094ef1SJacob Faibussowitsch . SNESConvergenceTestFunction - routine to test for convergence
4098dc4c0fb0SBarry Smith . cctx                        - [optional] context for private data for the convergence routine  (may be `NULL`)
4099dc4c0fb0SBarry Smith - destroy                     - [optional] destructor for the context (may be `NULL`; `PETSC_NULL_FUNCTION` in Fortran)
41009b94acceSBarry Smith 
410136851e7fSLois Curfman McInnes   Level: advanced
410236851e7fSLois Curfman McInnes 
41031cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESConvergedDefault()`, `SNESConvergedSkip()`, `SNESConvergenceTestFunction`
41049b94acceSBarry Smith @*/
4105d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetConvergenceTest(SNES snes, PetscErrorCode (*SNESConvergenceTestFunction)(SNES, PetscInt, PetscReal, PetscReal, PetscReal, SNESConvergedReason *, void *), void *cctx, PetscErrorCode (*destroy)(void *))
4106d71ae5a4SJacob Faibussowitsch {
41073a40ed3dSBarry Smith   PetscFunctionBegin;
41080700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4109e2a6519dSDmitry Karpeev   if (!SNESConvergenceTestFunction) SNESConvergenceTestFunction = SNESConvergedSkip;
41101baa6e33SBarry Smith   if (snes->ops->convergeddestroy) PetscCall((*snes->ops->convergeddestroy)(snes->cnvP));
4111bf388a1fSBarry Smith   snes->ops->converged        = SNESConvergenceTestFunction;
41127f7931b9SBarry Smith   snes->ops->convergeddestroy = destroy;
411385385478SLisandro Dalcin   snes->cnvP                  = cctx;
41143ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
41159b94acceSBarry Smith }
41169b94acceSBarry Smith 
411752baeb72SSatish Balay /*@
4118f6dfbefdSBarry Smith   SNESGetConvergedReason - Gets the reason the `SNES` iteration was stopped.
4119184914b5SBarry Smith 
4120184914b5SBarry Smith   Not Collective
4121184914b5SBarry Smith 
4122184914b5SBarry Smith   Input Parameter:
4123f6dfbefdSBarry Smith . snes - the `SNES` context
4124184914b5SBarry Smith 
4125184914b5SBarry Smith   Output Parameter:
4126f6dfbefdSBarry Smith . reason - negative value indicates diverged, positive value converged, see `SNESConvergedReason` for the individual convergence tests for complete lists
4127184914b5SBarry Smith 
4128f6dfbefdSBarry Smith   Options Database Key:
41296a4d7782SBarry Smith . -snes_converged_reason - prints the reason to standard out
41306a4d7782SBarry Smith 
4131184914b5SBarry Smith   Level: intermediate
4132184914b5SBarry Smith 
4133f6dfbefdSBarry Smith   Note:
4134f6dfbefdSBarry Smith   Should only be called after the call the `SNESSolve()` is complete, if it is called earlier it returns the value `SNES__CONVERGED_ITERATING`.
4135184914b5SBarry Smith 
41361cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSolve()`, `SNESSetConvergenceTest()`, `SNESSetConvergedReason()`, `SNESConvergedReason`, `SNESGetConvergedReasonString()`
4137184914b5SBarry Smith @*/
4138d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetConvergedReason(SNES snes, SNESConvergedReason *reason)
4139d71ae5a4SJacob Faibussowitsch {
4140184914b5SBarry Smith   PetscFunctionBegin;
41410700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
41424482741eSBarry Smith   PetscValidPointer(reason, 2);
4143184914b5SBarry Smith   *reason = snes->reason;
41443ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4145184914b5SBarry Smith }
4146184914b5SBarry Smith 
4147c4421ceaSFande Kong /*@C
4148f6dfbefdSBarry Smith   SNESGetConvergedReasonString - Return a human readable string for `SNESConvergedReason`
4149c4421ceaSFande Kong 
4150c4421ceaSFande Kong   Not Collective
4151c4421ceaSFande Kong 
4152c4421ceaSFande Kong   Input Parameter:
4153f6dfbefdSBarry Smith . snes - the `SNES` context
4154c4421ceaSFande Kong 
4155c4421ceaSFande Kong   Output Parameter:
4156dc4c0fb0SBarry Smith . strreason - a human readable string that describes `SNES` converged reason
4157c4421ceaSFande Kong 
415899c90e12SSatish Balay   Level: beginner
4159c4421ceaSFande Kong 
41601cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetConvergedReason()`
4161c4421ceaSFande Kong @*/
4162d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetConvergedReasonString(SNES snes, const char **strreason)
4163d71ae5a4SJacob Faibussowitsch {
4164c4421ceaSFande Kong   PetscFunctionBegin;
4165c4421ceaSFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4166dadcf809SJacob Faibussowitsch   PetscValidPointer(strreason, 2);
4167c4421ceaSFande Kong   *strreason = SNESConvergedReasons[snes->reason];
41683ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4169c4421ceaSFande Kong }
4170c4421ceaSFande Kong 
417133866048SMatthew G. Knepley /*@
4172f6dfbefdSBarry Smith   SNESSetConvergedReason - Sets the reason the `SNES` iteration was stopped.
417333866048SMatthew G. Knepley 
417433866048SMatthew G. Knepley   Not Collective
417533866048SMatthew G. Knepley 
417633866048SMatthew G. Knepley   Input Parameters:
4177f6dfbefdSBarry Smith + snes   - the `SNES` context
4178f6dfbefdSBarry Smith - reason - negative value indicates diverged, positive value converged, see `SNESConvergedReason` or the
417933866048SMatthew G. Knepley             manual pages for the individual convergence tests for complete lists
418033866048SMatthew G. Knepley 
4181f6dfbefdSBarry Smith   Level: developer
4182f6dfbefdSBarry Smith 
4183*e4094ef1SJacob Faibussowitsch   Developer Notes:
4184f6dfbefdSBarry Smith   Called inside the various `SNESSolve()` implementations
418533866048SMatthew G. Knepley 
41861cc06b55SBarry Smith .seealso: [](ch_snes), `SNESGetConvergedReason()`, `SNESSetConvergenceTest()`, `SNESConvergedReason`
418733866048SMatthew G. Knepley @*/
4188d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetConvergedReason(SNES snes, SNESConvergedReason reason)
4189d71ae5a4SJacob Faibussowitsch {
419033866048SMatthew G. Knepley   PetscFunctionBegin;
419133866048SMatthew G. Knepley   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
419233866048SMatthew G. Knepley   snes->reason = reason;
41933ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
419433866048SMatthew G. Knepley }
419533866048SMatthew G. Knepley 
4196c9005455SLois Curfman McInnes /*@
4197c9005455SLois Curfman McInnes   SNESSetConvergenceHistory - Sets the array used to hold the convergence history.
4198c9005455SLois Curfman McInnes 
4199c3339decSBarry Smith   Logically Collective
4200fee21e36SBarry Smith 
4201c7afd0dbSLois Curfman McInnes   Input Parameters:
4202f6dfbefdSBarry Smith + snes  - iterative context obtained from `SNESCreate()`
42038c7482ecSBarry Smith . a     - array to hold history, this array will contain the function norms computed at each step
4204cd5578b5SBarry Smith . its   - integer array holds the number of linear iterations for each solve.
4205758f92a0SBarry Smith . na    - size of a and its
4206f6dfbefdSBarry Smith - reset - `PETSC_TRUE` indicates each new nonlinear solve resets the history counter to zero,
4207758f92a0SBarry Smith            else it continues storing new values for new nonlinear solves after the old ones
4208c7afd0dbSLois Curfman McInnes 
4209dc4c0fb0SBarry Smith   Level: intermediate
4210dc4c0fb0SBarry Smith 
4211308dcc3eSBarry Smith   Notes:
4212dc4c0fb0SBarry Smith   If 'a' and 'its' are `NULL` then space is allocated for the history. If 'na' `PETSC_DECIDE` or `PETSC_DEFAULT` then a
4213308dcc3eSBarry Smith   default array of length 10000 is allocated.
4214308dcc3eSBarry Smith 
4215c9005455SLois Curfman McInnes   This routine is useful, e.g., when running a code for purposes
4216c9005455SLois Curfman McInnes   of accurate performance monitoring, when no I/O should be done
4217c9005455SLois Curfman McInnes   during the section of code that is being timed.
4218c9005455SLois Curfman McInnes 
42191cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESGetConvergenceHistory()`
4220c9005455SLois Curfman McInnes @*/
4221d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetConvergenceHistory(SNES snes, PetscReal a[], PetscInt its[], PetscInt na, PetscBool reset)
4222d71ae5a4SJacob Faibussowitsch {
42233a40ed3dSBarry Smith   PetscFunctionBegin;
42240700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4225064a246eSJacob Faibussowitsch   if (a) PetscValidRealPointer(a, 2);
4226a562a398SLisandro Dalcin   if (its) PetscValidIntPointer(its, 3);
42277a1ec6d4SBarry Smith   if (!a) {
4228308dcc3eSBarry Smith     if (na == PETSC_DECIDE || na == PETSC_DEFAULT) na = 1000;
42299566063dSJacob Faibussowitsch     PetscCall(PetscCalloc2(na, &a, na, &its));
4230071fcb05SBarry Smith     snes->conv_hist_alloc = PETSC_TRUE;
4231308dcc3eSBarry Smith   }
4232c9005455SLois Curfman McInnes   snes->conv_hist       = a;
4233758f92a0SBarry Smith   snes->conv_hist_its   = its;
4234115dd874SBarry Smith   snes->conv_hist_max   = (size_t)na;
4235a12bc48fSLisandro Dalcin   snes->conv_hist_len   = 0;
4236758f92a0SBarry Smith   snes->conv_hist_reset = reset;
42373ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4238758f92a0SBarry Smith }
4239758f92a0SBarry Smith 
4240d1e78c4fSBarry Smith #if defined(PETSC_HAVE_MATLAB)
4241c6db04a5SJed Brown   #include <engine.h> /* MATLAB include file */
4242c6db04a5SJed Brown   #include <mex.h>    /* MATLAB include file */
424399e0435eSBarry Smith 
4244d71ae5a4SJacob Faibussowitsch PETSC_EXTERN mxArray *SNESGetConvergenceHistoryMatlab(SNES snes)
4245d71ae5a4SJacob Faibussowitsch {
4246308dcc3eSBarry Smith   mxArray   *mat;
4247308dcc3eSBarry Smith   PetscInt   i;
4248308dcc3eSBarry Smith   PetscReal *ar;
4249308dcc3eSBarry Smith 
4250308dcc3eSBarry Smith   mat = mxCreateDoubleMatrix(snes->conv_hist_len, 1, mxREAL);
4251308dcc3eSBarry Smith   ar  = (PetscReal *)mxGetData(mat);
4252f5af7f23SKarl Rupp   for (i = 0; i < snes->conv_hist_len; i++) ar[i] = snes->conv_hist[i];
425311cc89d2SBarry Smith   return mat;
4254308dcc3eSBarry Smith }
4255308dcc3eSBarry Smith #endif
4256308dcc3eSBarry Smith 
42570c4c9dddSBarry Smith /*@C
4258758f92a0SBarry Smith   SNESGetConvergenceHistory - Gets the array used to hold the convergence history.
4259758f92a0SBarry Smith 
42603f9fe445SBarry Smith   Not Collective
4261758f92a0SBarry Smith 
4262758f92a0SBarry Smith   Input Parameter:
4263f6dfbefdSBarry Smith . snes - iterative context obtained from `SNESCreate()`
4264758f92a0SBarry Smith 
4265758f92a0SBarry Smith   Output Parameters:
4266f6dfbefdSBarry Smith + a   - array to hold history, usually was set with `SNESSetConvergenceHistory()`
4267758f92a0SBarry Smith . its - integer array holds the number of linear iterations (or
4268758f92a0SBarry Smith          negative if not converged) for each solve.
426920f4b53cSBarry Smith - na  - size of `a` and `its`
4270758f92a0SBarry Smith 
4271dc4c0fb0SBarry Smith   Level: intermediate
4272dc4c0fb0SBarry Smith 
427320f4b53cSBarry Smith   Note:
427420f4b53cSBarry Smith   This routine is useful, e.g., when running a code for purposes
427520f4b53cSBarry Smith   of accurate performance monitoring, when no I/O should be done
427620f4b53cSBarry Smith   during the section of code that is being timed.
427720f4b53cSBarry Smith 
4278*e4094ef1SJacob Faibussowitsch   Fortran Notes:
4279758f92a0SBarry Smith   The calling sequence for this routine in Fortran is
4280dc4c0fb0SBarry Smith .vb
4281dc4c0fb0SBarry Smith     call SNESGetConvergenceHistory(SNES snes, integer na, integer ierr)
4282dc4c0fb0SBarry Smith .ve
4283758f92a0SBarry Smith 
42841cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetConvergenceHistory()`
4285758f92a0SBarry Smith @*/
4286d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetConvergenceHistory(SNES snes, PetscReal *a[], PetscInt *its[], PetscInt *na)
4287d71ae5a4SJacob Faibussowitsch {
4288758f92a0SBarry Smith   PetscFunctionBegin;
42890700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4290758f92a0SBarry Smith   if (a) *a = snes->conv_hist;
4291758f92a0SBarry Smith   if (its) *its = snes->conv_hist_its;
4292115dd874SBarry Smith   if (na) *na = (PetscInt)snes->conv_hist_len;
42933ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4294c9005455SLois Curfman McInnes }
4295c9005455SLois Curfman McInnes 
4296ac226902SBarry Smith /*@C
429776b2cf59SMatthew Knepley   SNESSetUpdate - Sets the general-purpose update function called
4298eec8f646SJed Brown   at the beginning of every iteration of the nonlinear solve. Specifically
42997e4bb74cSBarry Smith   it is called just before the Jacobian is "evaluated".
430076b2cf59SMatthew Knepley 
4301c3339decSBarry Smith   Logically Collective
430276b2cf59SMatthew Knepley 
430376b2cf59SMatthew Knepley   Input Parameters:
4304a2b725a8SWilliam Gropp + snes - The nonlinear solver context
4305a2b725a8SWilliam Gropp - func - The function
430676b2cf59SMatthew Knepley 
430720f4b53cSBarry Smith   Calling sequence of `func`:
430820f4b53cSBarry Smith $ PetscErrorCode func(SNES snes, PetscInt step);
430920f4b53cSBarry Smith + snes - the nonlinear solver context
431020f4b53cSBarry Smith - step - The current step of the iteration
431176b2cf59SMatthew Knepley 
4312fe97e370SBarry Smith   Level: advanced
4313fe97e370SBarry Smith 
43146b7fb656SBarry Smith   Note:
4315f6dfbefdSBarry Smith   This is NOT what one uses to update the ghost points before a function evaluation, that should be done at the beginning of your function provided
4316f6dfbefdSBarry Smith   to `SNESSetFunction()`, or `SNESSetPicard()`
4317fe97e370SBarry Smith   This is not used by most users.
431876b2cf59SMatthew Knepley 
4319aaa8cc7dSPierre Jolivet   There are a variety of function hooks one many set that are called at different stages of the nonlinear solution process, see the functions listed below.
43206b7fb656SBarry Smith 
4321*e4094ef1SJacob Faibussowitsch .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetJacobian()`, `SNESLineSearchSetPreCheck()`, `SNESLineSearchSetPostCheck()`, `SNESNewtonTRSetPreCheck()`, `SNESNewtonTRSetPostCheck()`,
4322db781477SPatrick Sanan          `SNESMonitorSet()`, `SNESSetDivergenceTest()`
432376b2cf59SMatthew Knepley @*/
4324d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetUpdate(SNES snes, PetscErrorCode (*func)(SNES, PetscInt))
4325d71ae5a4SJacob Faibussowitsch {
432676b2cf59SMatthew Knepley   PetscFunctionBegin;
43270700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4328e7788613SBarry Smith   snes->ops->update = func;
43293ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
433076b2cf59SMatthew Knepley }
433176b2cf59SMatthew Knepley 
433291f3e32bSBarry Smith /*@C
4333f6dfbefdSBarry Smith   SNESConvergedReasonView - Displays the reason a `SNES` solve converged or diverged to a viewer
43342a359c20SBarry Smith 
4335c3339decSBarry Smith   Collective
43362a359c20SBarry Smith 
4337*e4094ef1SJacob Faibussowitsch   Input Parameters:
4338f6dfbefdSBarry Smith + snes   - iterative context obtained from `SNESCreate()`
43392a359c20SBarry Smith - viewer - the viewer to display the reason
43402a359c20SBarry Smith 
43412a359c20SBarry Smith   Options Database Keys:
4342ee300463SSatish Balay + -snes_converged_reason          - print reason for converged or diverged, also prints number of iterations
4343ee300463SSatish Balay - -snes_converged_reason ::failed - only print reason and number of iterations when diverged
4344eafd5ff0SAlex Lindsay 
4345f6dfbefdSBarry Smith   Note:
4346f6dfbefdSBarry Smith   To change the format of the output call `PetscViewerPushFormat`(viewer,format) before this call. Use `PETSC_VIEWER_DEFAULT` for the default,
4347f6dfbefdSBarry Smith   use `PETSC_VIEWER_FAILED` to only display a reason if it fails.
43482a359c20SBarry Smith 
43492a359c20SBarry Smith   Level: beginner
43502a359c20SBarry Smith 
43511cc06b55SBarry Smith .seealso: [](ch_snes), `SNESConvergedReason`, `PetscViewer`, `SNES`,
4352f6dfbefdSBarry Smith           `SNESCreate()`, `SNESSetUp()`, `SNESDestroy()`, `SNESSetTolerances()`, `SNESConvergedDefault()`, `SNESGetConvergedReason()`,
4353f6dfbefdSBarry Smith           `SNESConvergedReasonViewFromOptions()`,
4354db781477SPatrick Sanan           `PetscViewerPushFormat()`, `PetscViewerPopFormat()`
43552a359c20SBarry Smith @*/
4356d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESConvergedReasonView(SNES snes, PetscViewer viewer)
4357d71ae5a4SJacob Faibussowitsch {
435875cca76cSMatthew G. Knepley   PetscViewerFormat format;
43592a359c20SBarry Smith   PetscBool         isAscii;
43602a359c20SBarry Smith 
43612a359c20SBarry Smith   PetscFunctionBegin;
436219a666eeSBarry Smith   if (!viewer) viewer = PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)snes));
43639566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &isAscii));
43642a359c20SBarry Smith   if (isAscii) {
43659566063dSJacob Faibussowitsch     PetscCall(PetscViewerGetFormat(viewer, &format));
43669566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIAddTab(viewer, ((PetscObject)snes)->tablevel));
436775cca76cSMatthew G. Knepley     if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
436875cca76cSMatthew G. Knepley       DM       dm;
436975cca76cSMatthew G. Knepley       Vec      u;
437075cca76cSMatthew G. Knepley       PetscDS  prob;
437175cca76cSMatthew G. Knepley       PetscInt Nf, f;
437295cbbfd3SMatthew G. Knepley       PetscErrorCode (**exactSol)(PetscInt, PetscReal, const PetscReal[], PetscInt, PetscScalar[], void *);
437395cbbfd3SMatthew G. Knepley       void    **exactCtx;
437475cca76cSMatthew G. Knepley       PetscReal error;
437575cca76cSMatthew G. Knepley 
43769566063dSJacob Faibussowitsch       PetscCall(SNESGetDM(snes, &dm));
43779566063dSJacob Faibussowitsch       PetscCall(SNESGetSolution(snes, &u));
43789566063dSJacob Faibussowitsch       PetscCall(DMGetDS(dm, &prob));
43799566063dSJacob Faibussowitsch       PetscCall(PetscDSGetNumFields(prob, &Nf));
43809566063dSJacob Faibussowitsch       PetscCall(PetscMalloc2(Nf, &exactSol, Nf, &exactCtx));
43819566063dSJacob Faibussowitsch       for (f = 0; f < Nf; ++f) PetscCall(PetscDSGetExactSolution(prob, f, &exactSol[f], &exactCtx[f]));
43829566063dSJacob Faibussowitsch       PetscCall(DMComputeL2Diff(dm, 0.0, exactSol, exactCtx, u, &error));
43839566063dSJacob Faibussowitsch       PetscCall(PetscFree2(exactSol, exactCtx));
43849566063dSJacob Faibussowitsch       if (error < 1.0e-11) PetscCall(PetscViewerASCIIPrintf(viewer, "L_2 Error: < 1.0e-11\n"));
438563a3b9bcSJacob Faibussowitsch       else PetscCall(PetscViewerASCIIPrintf(viewer, "L_2 Error: %g\n", (double)error));
438675cca76cSMatthew G. Knepley     }
4387eafd5ff0SAlex Lindsay     if (snes->reason > 0 && format != PETSC_VIEWER_FAILED) {
43882a359c20SBarry Smith       if (((PetscObject)snes)->prefix) {
438963a3b9bcSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "Nonlinear %s solve converged due to %s iterations %" PetscInt_FMT "\n", ((PetscObject)snes)->prefix, SNESConvergedReasons[snes->reason], snes->iter));
43902a359c20SBarry Smith       } else {
439163a3b9bcSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "Nonlinear solve converged due to %s iterations %" PetscInt_FMT "\n", SNESConvergedReasons[snes->reason], snes->iter));
43922a359c20SBarry Smith       }
4393eafd5ff0SAlex Lindsay     } else if (snes->reason <= 0) {
43942a359c20SBarry Smith       if (((PetscObject)snes)->prefix) {
439563a3b9bcSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "Nonlinear %s solve did not converge due to %s iterations %" PetscInt_FMT "\n", ((PetscObject)snes)->prefix, SNESConvergedReasons[snes->reason], snes->iter));
43962a359c20SBarry Smith       } else {
439763a3b9bcSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "Nonlinear solve did not converge due to %s iterations %" PetscInt_FMT "\n", SNESConvergedReasons[snes->reason], snes->iter));
43982a359c20SBarry Smith       }
43992a359c20SBarry Smith     }
44009566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIISubtractTab(viewer, ((PetscObject)snes)->tablevel));
44012a359c20SBarry Smith   }
44023ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
44032a359c20SBarry Smith }
44042a359c20SBarry Smith 
4405c4421ceaSFande Kong /*@C
4406c4421ceaSFande Kong   SNESConvergedReasonViewSet - Sets an ADDITIONAL function that is to be used at the
4407aaa8cc7dSPierre Jolivet   end of the nonlinear solver to display the convergence reason of the nonlinear solver.
4408c4421ceaSFande Kong 
4409c3339decSBarry Smith   Logically Collective
4410c4421ceaSFande Kong 
4411c4421ceaSFande Kong   Input Parameters:
4412f6dfbefdSBarry Smith + snes              - the `SNES` context
4413c4421ceaSFande Kong . f                 - the snes converged reason view function
4414c4421ceaSFande Kong . vctx              - [optional] user-defined context for private data for the
4415dc4c0fb0SBarry Smith           snes converged reason view routine (use `NULL` if no context is desired)
4416dc4c0fb0SBarry Smith - reasonviewdestroy - [optional] routine that frees reasonview context (may be `NULL`)
4417c4421ceaSFande Kong 
4418c4421ceaSFande Kong   Options Database Keys:
4419f6dfbefdSBarry Smith + -snes_converged_reason             - sets a default `SNESConvergedReasonView()`
4420c4421ceaSFande Kong - -snes_converged_reason_view_cancel - cancels all converged reason viewers that have
4421c4421ceaSFande Kong                             been hardwired into a code by
4422f6dfbefdSBarry Smith                             calls to `SNESConvergedReasonViewSet()`, but
4423c4421ceaSFande Kong                             does not cancel those set via
4424c4421ceaSFande Kong                             the options database.
4425c4421ceaSFande Kong 
4426dc4c0fb0SBarry Smith   Level: intermediate
4427dc4c0fb0SBarry Smith 
4428f6dfbefdSBarry Smith   Note:
4429c4421ceaSFande Kong   Several different converged reason view routines may be set by calling
4430f6dfbefdSBarry Smith   `SNESConvergedReasonViewSet()` multiple times; all will be called in the
4431c4421ceaSFande Kong   order in which they were set.
4432c4421ceaSFande Kong 
44331cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESConvergedReason`, `SNESGetConvergedReason()`, `SNESConvergedReasonView()`, `SNESConvergedReasonViewCancel()`
4434c4421ceaSFande Kong @*/
4435d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESConvergedReasonViewSet(SNES snes, PetscErrorCode (*f)(SNES, void *), void *vctx, PetscErrorCode (*reasonviewdestroy)(void **))
4436d71ae5a4SJacob Faibussowitsch {
4437c4421ceaSFande Kong   PetscInt  i;
4438c4421ceaSFande Kong   PetscBool identical;
4439c4421ceaSFande Kong 
4440c4421ceaSFande Kong   PetscFunctionBegin;
4441c4421ceaSFande Kong   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4442c4421ceaSFande Kong   for (i = 0; i < snes->numberreasonviews; i++) {
44439566063dSJacob Faibussowitsch     PetscCall(PetscMonitorCompare((PetscErrorCode(*)(void))f, vctx, reasonviewdestroy, (PetscErrorCode(*)(void))snes->reasonview[i], snes->reasonviewcontext[i], snes->reasonviewdestroy[i], &identical));
44443ba16761SJacob Faibussowitsch     if (identical) PetscFunctionReturn(PETSC_SUCCESS);
4445c4421ceaSFande Kong   }
44465f80ce2aSJacob Faibussowitsch   PetscCheck(snes->numberreasonviews < MAXSNESREASONVIEWS, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Too many SNES reasonview set");
4447c4421ceaSFande Kong   snes->reasonview[snes->numberreasonviews]          = f;
4448c4421ceaSFande Kong   snes->reasonviewdestroy[snes->numberreasonviews]   = reasonviewdestroy;
4449c4421ceaSFande Kong   snes->reasonviewcontext[snes->numberreasonviews++] = (void *)vctx;
44503ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4451c4421ceaSFande Kong }
4452c4421ceaSFande Kong 
445391f3e32bSBarry Smith /*@
4454f6dfbefdSBarry Smith   SNESConvergedReasonViewFromOptions - Processes command line options to determine if/how a `SNESConvergedReason` is to be viewed.
4455c4421ceaSFande Kong   All the user-provided convergedReasonView routines will be involved as well, if they exist.
44562a359c20SBarry Smith 
4457c3339decSBarry Smith   Collective
44582a359c20SBarry Smith 
44592fe279fdSBarry Smith   Input Parameter:
4460f6dfbefdSBarry Smith . snes - the `SNES` object
44612a359c20SBarry Smith 
4462f6dfbefdSBarry Smith   Level: advanced
44632a359c20SBarry Smith 
44641cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESConvergedReason`, `SNESConvergedReasonViewSet()`, `SNESCreate()`, `SNESSetUp()`, `SNESDestroy()`,
4465f6dfbefdSBarry Smith           `SNESSetTolerances()`, `SNESConvergedDefault()`, `SNESGetConvergedReason()`, `SNESConvergedReasonView()`
44662a359c20SBarry Smith @*/
4467d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESConvergedReasonViewFromOptions(SNES snes)
4468d71ae5a4SJacob Faibussowitsch {
44692a359c20SBarry Smith   PetscViewer       viewer;
44702a359c20SBarry Smith   PetscBool         flg;
44712a359c20SBarry Smith   static PetscBool  incall = PETSC_FALSE;
44722a359c20SBarry Smith   PetscViewerFormat format;
4473c4421ceaSFande Kong   PetscInt          i;
44742a359c20SBarry Smith 
44752a359c20SBarry Smith   PetscFunctionBegin;
44763ba16761SJacob Faibussowitsch   if (incall) PetscFunctionReturn(PETSC_SUCCESS);
44772a359c20SBarry Smith   incall = PETSC_TRUE;
4478c4421ceaSFande Kong 
4479c4421ceaSFande Kong   /* All user-provided viewers are called first, if they exist. */
448048a46eb9SPierre Jolivet   for (i = 0; i < snes->numberreasonviews; i++) PetscCall((*snes->reasonview[i])(snes, snes->reasonviewcontext[i]));
4481c4421ceaSFande Kong 
4482c4421ceaSFande Kong   /* Call PETSc default routine if users ask for it */
44839566063dSJacob Faibussowitsch   PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_converged_reason", &viewer, &format, &flg));
44842a359c20SBarry Smith   if (flg) {
44859566063dSJacob Faibussowitsch     PetscCall(PetscViewerPushFormat(viewer, format));
44869566063dSJacob Faibussowitsch     PetscCall(SNESConvergedReasonView(snes, viewer));
44879566063dSJacob Faibussowitsch     PetscCall(PetscViewerPopFormat(viewer));
44889566063dSJacob Faibussowitsch     PetscCall(PetscViewerDestroy(&viewer));
44892a359c20SBarry Smith   }
44902a359c20SBarry Smith   incall = PETSC_FALSE;
44913ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
44922a359c20SBarry Smith }
44932a359c20SBarry Smith 
4494487a658cSBarry Smith /*@
4495f69a0ea3SMatthew Knepley   SNESSolve - Solves a nonlinear system F(x) = b.
4496f6dfbefdSBarry Smith   Call `SNESSolve()` after calling `SNESCreate()` and optional routines of the form `SNESSetXXX()`.
44979b94acceSBarry Smith 
4498c3339decSBarry Smith   Collective
4499c7afd0dbSLois Curfman McInnes 
4500b2002411SLois Curfman McInnes   Input Parameters:
4501f6dfbefdSBarry Smith + snes - the `SNES` context
4502dc4c0fb0SBarry Smith . b    - the constant part of the equation F(x) = b, or `NULL` to use zero.
450385385478SLisandro Dalcin - x    - the solution vector.
45049b94acceSBarry Smith 
4505dc4c0fb0SBarry Smith   Level: beginner
4506dc4c0fb0SBarry Smith 
4507f6dfbefdSBarry Smith   Note:
45088ddd3da0SLois Curfman McInnes   The user should initialize the vector,x, with the initial guess
4509f6dfbefdSBarry Smith   for the nonlinear solve prior to calling `SNESSolve()`.  In particular,
45108ddd3da0SLois Curfman McInnes   to employ an initial guess of zero, the user should explicitly set
4511f6dfbefdSBarry Smith   this vector to zero by calling `VecSet()`.
45128ddd3da0SLois Curfman McInnes 
45131cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESCreate()`, `SNESDestroy()`, `SNESSetFunction()`, `SNESSetJacobian()`, `SNESSetGridSequence()`, `SNESGetSolution()`,
4514db781477SPatrick Sanan           `SNESNewtonTRSetPreCheck()`, `SNESNewtonTRGetPreCheck()`, `SNESNewtonTRSetPostCheck()`, `SNESNewtonTRGetPostCheck()`,
4515db781477SPatrick Sanan           `SNESLineSearchSetPostCheck()`, `SNESLineSearchGetPostCheck()`, `SNESLineSearchSetPreCheck()`, `SNESLineSearchGetPreCheck()`
45169b94acceSBarry Smith @*/
4517d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSolve(SNES snes, Vec b, Vec x)
4518d71ae5a4SJacob Faibussowitsch {
4519ace3abfcSBarry Smith   PetscBool flg;
4520efd51863SBarry Smith   PetscInt  grid;
45210298fd71SBarry Smith   Vec       xcreated = NULL;
4522caa4e7f2SJed Brown   DM        dm;
4523052efed2SBarry Smith 
45243a40ed3dSBarry Smith   PetscFunctionBegin;
45250700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4526a69afd8bSBarry Smith   if (x) PetscValidHeaderSpecific(x, VEC_CLASSID, 3);
4527a69afd8bSBarry Smith   if (x) PetscCheckSameComm(snes, 1, x, 3);
45280700a824SBarry Smith   if (b) PetscValidHeaderSpecific(b, VEC_CLASSID, 2);
452985385478SLisandro Dalcin   if (b) PetscCheckSameComm(snes, 1, b, 2);
453085385478SLisandro Dalcin 
453134b4d3a8SMatthew G. Knepley   /* High level operations using the nonlinear solver */
453206fc46c8SMatthew G. Knepley   {
453306fc46c8SMatthew G. Knepley     PetscViewer       viewer;
453406fc46c8SMatthew G. Knepley     PetscViewerFormat format;
45357c88af5aSMatthew G. Knepley     PetscInt          num;
453606fc46c8SMatthew G. Knepley     PetscBool         flg;
453706fc46c8SMatthew G. Knepley     static PetscBool  incall = PETSC_FALSE;
453806fc46c8SMatthew G. Knepley 
453906fc46c8SMatthew G. Knepley     if (!incall) {
454034b4d3a8SMatthew G. Knepley       /* Estimate the convergence rate of the discretization */
45419566063dSJacob Faibussowitsch       PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_convergence_estimate", &viewer, &format, &flg));
454206fc46c8SMatthew G. Knepley       if (flg) {
454306fc46c8SMatthew G. Knepley         PetscConvEst conv;
454446079b62SMatthew G. Knepley         DM           dm;
454546079b62SMatthew G. Knepley         PetscReal   *alpha; /* Convergence rate of the solution error for each field in the L_2 norm */
454646079b62SMatthew G. Knepley         PetscInt     Nf;
454706fc46c8SMatthew G. Knepley 
454806fc46c8SMatthew G. Knepley         incall = PETSC_TRUE;
45499566063dSJacob Faibussowitsch         PetscCall(SNESGetDM(snes, &dm));
45509566063dSJacob Faibussowitsch         PetscCall(DMGetNumFields(dm, &Nf));
45519566063dSJacob Faibussowitsch         PetscCall(PetscCalloc1(Nf, &alpha));
45529566063dSJacob Faibussowitsch         PetscCall(PetscConvEstCreate(PetscObjectComm((PetscObject)snes), &conv));
45539566063dSJacob Faibussowitsch         PetscCall(PetscConvEstSetSolver(conv, (PetscObject)snes));
45549566063dSJacob Faibussowitsch         PetscCall(PetscConvEstSetFromOptions(conv));
45559566063dSJacob Faibussowitsch         PetscCall(PetscConvEstSetUp(conv));
45569566063dSJacob Faibussowitsch         PetscCall(PetscConvEstGetConvRate(conv, alpha));
45579566063dSJacob Faibussowitsch         PetscCall(PetscViewerPushFormat(viewer, format));
45589566063dSJacob Faibussowitsch         PetscCall(PetscConvEstRateView(conv, alpha, viewer));
45599566063dSJacob Faibussowitsch         PetscCall(PetscViewerPopFormat(viewer));
45609566063dSJacob Faibussowitsch         PetscCall(PetscViewerDestroy(&viewer));
45619566063dSJacob Faibussowitsch         PetscCall(PetscConvEstDestroy(&conv));
45629566063dSJacob Faibussowitsch         PetscCall(PetscFree(alpha));
456306fc46c8SMatthew G. Knepley         incall = PETSC_FALSE;
456406fc46c8SMatthew G. Knepley       }
456534b4d3a8SMatthew G. Knepley       /* Adaptively refine the initial grid */
4566b2588ea6SMatthew G. Knepley       num = 1;
45679566063dSJacob Faibussowitsch       PetscCall(PetscOptionsGetInt(NULL, ((PetscObject)snes)->prefix, "-snes_adapt_initial", &num, &flg));
456834b4d3a8SMatthew G. Knepley       if (flg) {
456934b4d3a8SMatthew G. Knepley         DMAdaptor adaptor;
457034b4d3a8SMatthew G. Knepley 
457134b4d3a8SMatthew G. Knepley         incall = PETSC_TRUE;
45729566063dSJacob Faibussowitsch         PetscCall(DMAdaptorCreate(PetscObjectComm((PetscObject)snes), &adaptor));
45739566063dSJacob Faibussowitsch         PetscCall(DMAdaptorSetSolver(adaptor, snes));
45749566063dSJacob Faibussowitsch         PetscCall(DMAdaptorSetSequenceLength(adaptor, num));
45759566063dSJacob Faibussowitsch         PetscCall(DMAdaptorSetFromOptions(adaptor));
45769566063dSJacob Faibussowitsch         PetscCall(DMAdaptorSetUp(adaptor));
45779566063dSJacob Faibussowitsch         PetscCall(DMAdaptorAdapt(adaptor, x, DM_ADAPTATION_INITIAL, &dm, &x));
45789566063dSJacob Faibussowitsch         PetscCall(DMAdaptorDestroy(&adaptor));
457934b4d3a8SMatthew G. Knepley         incall = PETSC_FALSE;
458034b4d3a8SMatthew G. Knepley       }
45817c88af5aSMatthew G. Knepley       /* Use grid sequencing to adapt */
45827c88af5aSMatthew G. Knepley       num = 0;
45839566063dSJacob Faibussowitsch       PetscCall(PetscOptionsGetInt(NULL, ((PetscObject)snes)->prefix, "-snes_adapt_sequence", &num, NULL));
45847c88af5aSMatthew G. Knepley       if (num) {
45857c88af5aSMatthew G. Knepley         DMAdaptor adaptor;
45867c88af5aSMatthew G. Knepley 
45877c88af5aSMatthew G. Knepley         incall = PETSC_TRUE;
45889566063dSJacob Faibussowitsch         PetscCall(DMAdaptorCreate(PetscObjectComm((PetscObject)snes), &adaptor));
45899566063dSJacob Faibussowitsch         PetscCall(DMAdaptorSetSolver(adaptor, snes));
45909566063dSJacob Faibussowitsch         PetscCall(DMAdaptorSetSequenceLength(adaptor, num));
45919566063dSJacob Faibussowitsch         PetscCall(DMAdaptorSetFromOptions(adaptor));
45929566063dSJacob Faibussowitsch         PetscCall(DMAdaptorSetUp(adaptor));
45939566063dSJacob Faibussowitsch         PetscCall(DMAdaptorAdapt(adaptor, x, DM_ADAPTATION_SEQUENTIAL, &dm, &x));
45949566063dSJacob Faibussowitsch         PetscCall(DMAdaptorDestroy(&adaptor));
45957c88af5aSMatthew G. Knepley         incall = PETSC_FALSE;
45967c88af5aSMatthew G. Knepley       }
459706fc46c8SMatthew G. Knepley     }
459806fc46c8SMatthew G. Knepley   }
4599ad540459SPierre Jolivet   if (!x) x = snes->vec_sol;
4600caa4e7f2SJed Brown   if (!x) {
46019566063dSJacob Faibussowitsch     PetscCall(SNESGetDM(snes, &dm));
46029566063dSJacob Faibussowitsch     PetscCall(DMCreateGlobalVector(dm, &xcreated));
4603a69afd8bSBarry Smith     x = xcreated;
4604a69afd8bSBarry Smith   }
46059566063dSJacob Faibussowitsch   PetscCall(SNESViewFromOptions(snes, NULL, "-snes_view_pre"));
4606f05ece33SBarry Smith 
46079566063dSJacob Faibussowitsch   for (grid = 0; grid < snes->gridsequence; grid++) PetscCall(PetscViewerASCIIPushTab(PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)snes))));
4608efd51863SBarry Smith   for (grid = 0; grid < snes->gridsequence + 1; grid++) {
460985385478SLisandro Dalcin     /* set solution vector */
46109566063dSJacob Faibussowitsch     if (!grid) PetscCall(PetscObjectReference((PetscObject)x));
46119566063dSJacob Faibussowitsch     PetscCall(VecDestroy(&snes->vec_sol));
461285385478SLisandro Dalcin     snes->vec_sol = x;
46139566063dSJacob Faibussowitsch     PetscCall(SNESGetDM(snes, &dm));
4614caa4e7f2SJed Brown 
4615caa4e7f2SJed Brown     /* set affine vector if provided */
46169566063dSJacob Faibussowitsch     if (b) PetscCall(PetscObjectReference((PetscObject)b));
46179566063dSJacob Faibussowitsch     PetscCall(VecDestroy(&snes->vec_rhs));
461885385478SLisandro Dalcin     snes->vec_rhs = b;
461985385478SLisandro Dalcin 
46205f80ce2aSJacob Faibussowitsch     if (snes->vec_rhs) PetscCheck(snes->vec_func != snes->vec_rhs, PETSC_COMM_SELF, PETSC_ERR_ARG_IDN, "Right hand side vector cannot be function vector");
46215f80ce2aSJacob Faibussowitsch     PetscCheck(snes->vec_func != snes->vec_sol, PETSC_COMM_SELF, PETSC_ERR_ARG_IDN, "Solution vector cannot be function vector");
46225f80ce2aSJacob Faibussowitsch     PetscCheck(snes->vec_rhs != snes->vec_sol, PETSC_COMM_SELF, PETSC_ERR_ARG_IDN, "Solution vector cannot be right hand side vector");
4623aa624791SPierre Jolivet     if (!snes->vec_sol_update /* && snes->vec_sol */) PetscCall(VecDuplicate(snes->vec_sol, &snes->vec_sol_update));
46249566063dSJacob Faibussowitsch     PetscCall(DMShellSetGlobalVector(dm, snes->vec_sol));
46259566063dSJacob Faibussowitsch     PetscCall(SNESSetUp(snes));
46263f149594SLisandro Dalcin 
46277eee914bSBarry Smith     if (!grid) {
462825e27a38SBarry Smith       if (snes->ops->computeinitialguess) PetscCallBack("SNES callback initial guess", (*snes->ops->computeinitialguess)(snes, snes->vec_sol, snes->initialguessP));
4629dd568438SSatish Balay     }
4630d25893d9SBarry Smith 
4631abc0a331SBarry Smith     if (snes->conv_hist_reset) snes->conv_hist_len = 0;
46329371c9d4SSatish Balay     if (snes->counters_reset) {
46339371c9d4SSatish Balay       snes->nfuncs      = 0;
46349371c9d4SSatish Balay       snes->linear_its  = 0;
46359371c9d4SSatish Balay       snes->numFailures = 0;
46369371c9d4SSatish Balay     }
4637d5e45103SBarry Smith 
46382d157150SStefano Zampini     snes->reason = SNES_CONVERGED_ITERATING;
46399566063dSJacob Faibussowitsch     PetscCall(PetscLogEventBegin(SNES_Solve, snes, 0, 0, 0));
4640dbbe0bcdSBarry Smith     PetscUseTypeMethod(snes, solve);
46419566063dSJacob Faibussowitsch     PetscCall(PetscLogEventEnd(SNES_Solve, snes, 0, 0, 0));
46422d157150SStefano Zampini     PetscCheck(snes->reason, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Internal error, solver %s returned without setting converged reason", ((PetscObject)snes)->type_name);
4643422a814eSBarry Smith     snes->domainerror = PETSC_FALSE; /* clear the flag if it has been set */
46443f149594SLisandro Dalcin 
464537ec4e1aSPeter Brune     if (snes->lagjac_persist) snes->jac_iter += snes->iter;
464637ec4e1aSPeter Brune     if (snes->lagpre_persist) snes->pre_iter += snes->iter;
464737ec4e1aSPeter Brune 
46489566063dSJacob Faibussowitsch     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_test_local_min", NULL, NULL, &flg));
46499566063dSJacob Faibussowitsch     if (flg && !PetscPreLoadingOn) PetscCall(SNESTestLocalMin(snes));
4650c4421ceaSFande Kong     /* Call converged reason views. This may involve user-provided viewers as well */
46519566063dSJacob Faibussowitsch     PetscCall(SNESConvergedReasonViewFromOptions(snes));
46525968eb51SBarry Smith 
46535f80ce2aSJacob Faibussowitsch     if (snes->errorifnotconverged) PetscCheck(snes->reason >= 0, PetscObjectComm((PetscObject)snes), PETSC_ERR_NOT_CONVERGED, "SNESSolve has not converged");
46549c8e83a9SBarry Smith     if (snes->reason < 0) break;
4655efd51863SBarry Smith     if (grid < snes->gridsequence) {
4656efd51863SBarry Smith       DM  fine;
4657efd51863SBarry Smith       Vec xnew;
4658efd51863SBarry Smith       Mat interp;
4659efd51863SBarry Smith 
46609566063dSJacob Faibussowitsch       PetscCall(DMRefine(snes->dm, PetscObjectComm((PetscObject)snes), &fine));
46615f80ce2aSJacob Faibussowitsch       PetscCheck(fine, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_INCOMP, "DMRefine() did not perform any refinement, cannot continue grid sequencing");
46629566063dSJacob Faibussowitsch       PetscCall(DMCreateInterpolation(snes->dm, fine, &interp, NULL));
46639566063dSJacob Faibussowitsch       PetscCall(DMCreateGlobalVector(fine, &xnew));
46649566063dSJacob Faibussowitsch       PetscCall(MatInterpolate(interp, x, xnew));
46659566063dSJacob Faibussowitsch       PetscCall(DMInterpolate(snes->dm, interp, fine));
46669566063dSJacob Faibussowitsch       PetscCall(MatDestroy(&interp));
4667efd51863SBarry Smith       x = xnew;
4668efd51863SBarry Smith 
46699566063dSJacob Faibussowitsch       PetscCall(SNESReset(snes));
46709566063dSJacob Faibussowitsch       PetscCall(SNESSetDM(snes, fine));
46719566063dSJacob Faibussowitsch       PetscCall(SNESResetFromOptions(snes));
46729566063dSJacob Faibussowitsch       PetscCall(DMDestroy(&fine));
46739566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPopTab(PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)snes))));
4674efd51863SBarry Smith     }
4675efd51863SBarry Smith   }
46769566063dSJacob Faibussowitsch   PetscCall(SNESViewFromOptions(snes, NULL, "-snes_view"));
46779566063dSJacob Faibussowitsch   PetscCall(VecViewFromOptions(snes->vec_sol, (PetscObject)snes, "-snes_view_solution"));
46789566063dSJacob Faibussowitsch   PetscCall(DMMonitor(snes->dm));
46799566063dSJacob Faibussowitsch   PetscCall(SNESMonitorPauseFinal_Internal(snes));
46803f7e2da0SPeter Brune 
46819566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&xcreated));
46829566063dSJacob Faibussowitsch   PetscCall(PetscObjectSAWsBlock((PetscObject)snes));
46833ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
46849b94acceSBarry Smith }
46859b94acceSBarry Smith 
46869b94acceSBarry Smith /* --------- Internal routines for SNES Package --------- */
46879b94acceSBarry Smith 
468882bf6240SBarry Smith /*@C
46894b0e389bSBarry Smith   SNESSetType - Sets the method for the nonlinear solver.
46909b94acceSBarry Smith 
4691c3339decSBarry Smith   Collective
4692fee21e36SBarry Smith 
4693c7afd0dbSLois Curfman McInnes   Input Parameters:
4694f6dfbefdSBarry Smith + snes - the `SNES` context
4695454a90a3SBarry Smith - type - a known method
4696c7afd0dbSLois Curfman McInnes 
4697c7afd0dbSLois Curfman McInnes   Options Database Key:
4698454a90a3SBarry Smith . -snes_type <type> - Sets the method; use -help for a list
469904d7464bSBarry Smith    of available methods (for instance, newtonls or newtontr)
4700ae12b187SLois Curfman McInnes 
4701dc4c0fb0SBarry Smith   Level: intermediate
4702dc4c0fb0SBarry Smith 
47039b94acceSBarry Smith   Notes:
4704e090d566SSatish Balay   See "petsc/include/petscsnes.h" for available methods (for instance)
4705f6dfbefdSBarry Smith +    `SNESNEWTONLS` - Newton's method with line search
4706c7afd0dbSLois Curfman McInnes   (systems of nonlinear equations)
47074a221d59SStefano Zampini -    `SNESNEWTONTR` - Newton's method with trust region
4708c7afd0dbSLois Curfman McInnes   (systems of nonlinear equations)
47099b94acceSBarry Smith 
4710f6dfbefdSBarry Smith   Normally, it is best to use the `SNESSetFromOptions()` command and then
4711f6dfbefdSBarry Smith   set the `SNES` solver type from the options database rather than by using
4712ae12b187SLois Curfman McInnes   this routine.  Using the options database provides the user with
4713ae12b187SLois Curfman McInnes   maximum flexibility in evaluating the many nonlinear solvers.
4714f6dfbefdSBarry Smith   The `SNESSetType()` routine is provided for those situations where it
4715ae12b187SLois Curfman McInnes   is necessary to set the nonlinear solver independently of the command
4716ae12b187SLois Curfman McInnes   line or options database.  This might be the case, for example, when
4717ae12b187SLois Curfman McInnes   the choice of solver changes during the execution of the program,
4718ae12b187SLois Curfman McInnes   and the user's application is taking responsibility for choosing the
4719b0a32e0cSBarry Smith   appropriate method.
472036851e7fSLois Curfman McInnes 
4721*e4094ef1SJacob Faibussowitsch   Developer Notes:
4722f6dfbefdSBarry Smith   `SNESRegister()` adds a constructor for a new `SNESType` to `SNESList`, `SNESSetType()` locates
4723f6dfbefdSBarry Smith   the constructor in that list and calls it to create the specific object.
47248f6c3df8SBarry Smith 
47251cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESType`, `SNESCreate()`, `SNESDestroy()`, `SNESGetType()`, `SNESSetFromOptions()`
47269b94acceSBarry Smith @*/
4727d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetType(SNES snes, SNESType type)
4728d71ae5a4SJacob Faibussowitsch {
4729ace3abfcSBarry Smith   PetscBool match;
47305f80ce2aSJacob Faibussowitsch   PetscErrorCode (*r)(SNES);
47313a40ed3dSBarry Smith 
47323a40ed3dSBarry Smith   PetscFunctionBegin;
47330700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
47344482741eSBarry Smith   PetscValidCharPointer(type, 2);
473582bf6240SBarry Smith 
47369566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)snes, type, &match));
47373ba16761SJacob Faibussowitsch   if (match) PetscFunctionReturn(PETSC_SUCCESS);
473892ff6ae8SBarry Smith 
47399566063dSJacob Faibussowitsch   PetscCall(PetscFunctionListFind(SNESList, type, &r));
47406adde796SStefano Zampini   PetscCheck(r, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_UNKNOWN_TYPE, "Unable to find requested SNES type %s", type);
474175396ef9SLisandro Dalcin   /* Destroy the previous private SNES context */
4742dbbe0bcdSBarry Smith   PetscTryTypeMethod(snes, destroy);
474375396ef9SLisandro Dalcin   /* Reinitialize function pointers in SNESOps structure */
47449e5d0892SLisandro Dalcin   snes->ops->setup          = NULL;
47459e5d0892SLisandro Dalcin   snes->ops->solve          = NULL;
47469e5d0892SLisandro Dalcin   snes->ops->view           = NULL;
47479e5d0892SLisandro Dalcin   snes->ops->setfromoptions = NULL;
47489e5d0892SLisandro Dalcin   snes->ops->destroy        = NULL;
47497fe760d5SStefano Zampini 
47507fe760d5SStefano Zampini   /* It may happen the user has customized the line search before calling SNESSetType */
47519566063dSJacob Faibussowitsch   if (((PetscObject)snes)->type_name) PetscCall(SNESLineSearchDestroy(&snes->linesearch));
47527fe760d5SStefano Zampini 
475375396ef9SLisandro Dalcin   /* Call the SNESCreate_XXX routine for this particular Nonlinear solver */
475475396ef9SLisandro Dalcin   snes->setupcalled = PETSC_FALSE;
4755f5af7f23SKarl Rupp 
47569566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)snes, type));
47579566063dSJacob Faibussowitsch   PetscCall((*r)(snes));
47583ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
47599b94acceSBarry Smith }
47609b94acceSBarry Smith 
47619b94acceSBarry Smith /*@C
4762f6dfbefdSBarry Smith   SNESGetType - Gets the `SNES` method type and name (as a string).
47639b94acceSBarry Smith 
4764c7afd0dbSLois Curfman McInnes   Not Collective
4765c7afd0dbSLois Curfman McInnes 
47669b94acceSBarry Smith   Input Parameter:
47674b0e389bSBarry Smith . snes - nonlinear solver context
47689b94acceSBarry Smith 
47699b94acceSBarry Smith   Output Parameter:
4770f6dfbefdSBarry Smith . type - `SNES` method (a character string)
47719b94acceSBarry Smith 
477236851e7fSLois Curfman McInnes   Level: intermediate
477336851e7fSLois Curfman McInnes 
47741cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetType()`, `SNESType`, `SNESSetFromOptions()`, `SNES`
47759b94acceSBarry Smith @*/
4776d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetType(SNES snes, SNESType *type)
4777d71ae5a4SJacob Faibussowitsch {
47783a40ed3dSBarry Smith   PetscFunctionBegin;
47790700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
47804482741eSBarry Smith   PetscValidPointer(type, 2);
47817adad957SLisandro Dalcin   *type = ((PetscObject)snes)->type_name;
47823ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
47839b94acceSBarry Smith }
47849b94acceSBarry Smith 
47853cd8a7caSMatthew G. Knepley /*@
4786f6dfbefdSBarry Smith   SNESSetSolution - Sets the solution vector for use by the `SNES` routines.
47873cd8a7caSMatthew G. Knepley 
4788c3339decSBarry Smith   Logically Collective
47893cd8a7caSMatthew G. Knepley 
47903cd8a7caSMatthew G. Knepley   Input Parameters:
4791f6dfbefdSBarry Smith + snes - the `SNES` context obtained from `SNESCreate()`
47923cd8a7caSMatthew G. Knepley - u    - the solution vector
47933cd8a7caSMatthew G. Knepley 
47943cd8a7caSMatthew G. Knepley   Level: beginner
47953cd8a7caSMatthew G. Knepley 
47961cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESGetSolution()`, `Vec`
47973cd8a7caSMatthew G. Knepley @*/
4798d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetSolution(SNES snes, Vec u)
4799d71ae5a4SJacob Faibussowitsch {
48003cd8a7caSMatthew G. Knepley   DM dm;
48013cd8a7caSMatthew G. Knepley 
48023cd8a7caSMatthew G. Knepley   PetscFunctionBegin;
48033cd8a7caSMatthew G. Knepley   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
48043cd8a7caSMatthew G. Knepley   PetscValidHeaderSpecific(u, VEC_CLASSID, 2);
48059566063dSJacob Faibussowitsch   PetscCall(PetscObjectReference((PetscObject)u));
48069566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&snes->vec_sol));
48073cd8a7caSMatthew G. Knepley 
48083cd8a7caSMatthew G. Knepley   snes->vec_sol = u;
48093cd8a7caSMatthew G. Knepley 
48109566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
48119566063dSJacob Faibussowitsch   PetscCall(DMShellSetGlobalVector(dm, u));
48123ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
48133cd8a7caSMatthew G. Knepley }
48143cd8a7caSMatthew G. Knepley 
481552baeb72SSatish Balay /*@
48169b94acceSBarry Smith   SNESGetSolution - Returns the vector where the approximate solution is
4817f6dfbefdSBarry Smith   stored. This is the fine grid solution when using `SNESSetGridSequence()`.
48189b94acceSBarry Smith 
4819f6dfbefdSBarry Smith   Not Collective, but x is parallel if snes is parallel
4820c7afd0dbSLois Curfman McInnes 
48219b94acceSBarry Smith   Input Parameter:
4822f6dfbefdSBarry Smith . snes - the `SNES` context
48239b94acceSBarry Smith 
48249b94acceSBarry Smith   Output Parameter:
48259b94acceSBarry Smith . x - the solution
48269b94acceSBarry Smith 
482770e92668SMatthew Knepley   Level: intermediate
482836851e7fSLois Curfman McInnes 
48291cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetSolution()`, `SNESSolve()`, `SNES`, `SNESGetSolutionUpdate()`, `SNESGetFunction()`
48309b94acceSBarry Smith @*/
4831d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetSolution(SNES snes, Vec *x)
4832d71ae5a4SJacob Faibussowitsch {
48333a40ed3dSBarry Smith   PetscFunctionBegin;
48340700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
48354482741eSBarry Smith   PetscValidPointer(x, 2);
483685385478SLisandro Dalcin   *x = snes->vec_sol;
48373ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
483870e92668SMatthew Knepley }
483970e92668SMatthew Knepley 
484052baeb72SSatish Balay /*@
48419b94acceSBarry Smith   SNESGetSolutionUpdate - Returns the vector where the solution update is
48429b94acceSBarry Smith   stored.
48439b94acceSBarry Smith 
4844f6dfbefdSBarry Smith   Not Collective, but x is parallel if snes is parallel
4845c7afd0dbSLois Curfman McInnes 
48469b94acceSBarry Smith   Input Parameter:
4847f6dfbefdSBarry Smith . snes - the `SNES` context
48489b94acceSBarry Smith 
48499b94acceSBarry Smith   Output Parameter:
48509b94acceSBarry Smith . x - the solution update
48519b94acceSBarry Smith 
485236851e7fSLois Curfman McInnes   Level: advanced
485336851e7fSLois Curfman McInnes 
48541cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESGetSolution()`, `SNESGetFunction()`
48559b94acceSBarry Smith @*/
4856d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetSolutionUpdate(SNES snes, Vec *x)
4857d71ae5a4SJacob Faibussowitsch {
48583a40ed3dSBarry Smith   PetscFunctionBegin;
48590700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
48604482741eSBarry Smith   PetscValidPointer(x, 2);
486185385478SLisandro Dalcin   *x = snes->vec_sol_update;
48623ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
48639b94acceSBarry Smith }
48649b94acceSBarry Smith 
48659b94acceSBarry Smith /*@C
4866f6dfbefdSBarry Smith   SNESGetFunction - Returns the function that defines the nonlinear system set with `SNESSetFunction()`
48679b94acceSBarry Smith 
4868f6dfbefdSBarry Smith   Not Collective, but r is parallel if snes is parallel. Collective if r is requested, but has not been created yet.
4869c7afd0dbSLois Curfman McInnes 
48709b94acceSBarry Smith   Input Parameter:
4871f6dfbefdSBarry Smith . snes - the `SNES` context
48729b94acceSBarry Smith 
4873d8d19677SJose E. Roman   Output Parameters:
4874dc4c0fb0SBarry Smith + r   - the vector that is used to store residuals (or `NULL` if you don't want it)
487520f4b53cSBarry Smith . f   - the function (or `NULL` if you don't want it);  for calling sequence see `SNESFunction`
4876dc4c0fb0SBarry Smith - ctx - the function context (or `NULL` if you don't want it)
48779b94acceSBarry Smith 
487836851e7fSLois Curfman McInnes   Level: advanced
487936851e7fSLois Curfman McInnes 
4880f6dfbefdSBarry Smith   Note:
4881dc4c0fb0SBarry Smith   The vector `r` DOES NOT, in general, contain the current value of the `SNES` nonlinear function
488204edfde5SBarry Smith 
4883*e4094ef1SJacob Faibussowitsch .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetFunction()`, `SNESGetSolution()`, `SNESFunction`
48849b94acceSBarry Smith @*/
4885d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetFunction(SNES snes, Vec *r, PetscErrorCode (**f)(SNES, Vec, Vec, void *), void **ctx)
4886d71ae5a4SJacob Faibussowitsch {
48876cab3a1bSJed Brown   DM dm;
4888a63bb30eSJed Brown 
48893a40ed3dSBarry Smith   PetscFunctionBegin;
48900700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4891a63bb30eSJed Brown   if (r) {
4892a63bb30eSJed Brown     if (!snes->vec_func) {
4893a63bb30eSJed Brown       if (snes->vec_rhs) {
48949566063dSJacob Faibussowitsch         PetscCall(VecDuplicate(snes->vec_rhs, &snes->vec_func));
4895a63bb30eSJed Brown       } else if (snes->vec_sol) {
48969566063dSJacob Faibussowitsch         PetscCall(VecDuplicate(snes->vec_sol, &snes->vec_func));
4897a63bb30eSJed Brown       } else if (snes->dm) {
48989566063dSJacob Faibussowitsch         PetscCall(DMCreateGlobalVector(snes->dm, &snes->vec_func));
4899a63bb30eSJed Brown       }
4900a63bb30eSJed Brown     }
4901a63bb30eSJed Brown     *r = snes->vec_func;
4902a63bb30eSJed Brown   }
49039566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
49049566063dSJacob Faibussowitsch   PetscCall(DMSNESGetFunction(dm, f, ctx));
49053ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
49069b94acceSBarry Smith }
49079b94acceSBarry Smith 
4908c79ef259SPeter Brune /*@C
490937fdd005SBarry Smith   SNESGetNGS - Returns the function and context set with `SNESSetNGS()`
4910c79ef259SPeter Brune 
4911c79ef259SPeter Brune   Input Parameter:
4912f6dfbefdSBarry Smith . snes - the `SNES` context
4913c79ef259SPeter Brune 
4914d8d19677SJose E. Roman   Output Parameters:
491537fdd005SBarry Smith + f   - the function (or `NULL`) see `SNESSetNGS()` for details
4916dc4c0fb0SBarry Smith - ctx - the function context (or `NULL`)
4917c79ef259SPeter Brune 
4918c79ef259SPeter Brune   Level: advanced
4919c79ef259SPeter Brune 
49201cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetNGS()`, `SNESGetFunction()`
4921c79ef259SPeter Brune @*/
4922d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetNGS(SNES snes, PetscErrorCode (**f)(SNES, Vec, Vec, void *), void **ctx)
4923d71ae5a4SJacob Faibussowitsch {
49246cab3a1bSJed Brown   DM dm;
49256cab3a1bSJed Brown 
4926646217ecSPeter Brune   PetscFunctionBegin;
4927646217ecSPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
49289566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
49299566063dSJacob Faibussowitsch   PetscCall(DMSNESGetNGS(dm, f, ctx));
49303ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4931646217ecSPeter Brune }
4932646217ecSPeter Brune 
49333c7409f5SSatish Balay /*@C
49343c7409f5SSatish Balay   SNESSetOptionsPrefix - Sets the prefix used for searching for all
4935f6dfbefdSBarry Smith   `SNES` options in the database.
49363c7409f5SSatish Balay 
4937c3339decSBarry Smith   Logically Collective
4938fee21e36SBarry Smith 
4939d8d19677SJose E. Roman   Input Parameters:
4940f6dfbefdSBarry Smith + snes   - the `SNES` context
4941c7afd0dbSLois Curfman McInnes - prefix - the prefix to prepend to all option names
4942c7afd0dbSLois Curfman McInnes 
4943dc4c0fb0SBarry Smith   Level: advanced
4944dc4c0fb0SBarry Smith 
4945f6dfbefdSBarry Smith   Note:
4946a83b1b31SSatish Balay   A hyphen (-) must NOT be given at the beginning of the prefix name.
4947c7afd0dbSLois Curfman McInnes   The first character of all runtime options is AUTOMATICALLY the hyphen.
4948d850072dSLois Curfman McInnes 
49491cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetFromOptions()`, `SNESAppendOptionsPrefix()`
49503c7409f5SSatish Balay @*/
4951d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetOptionsPrefix(SNES snes, const char prefix[])
4952d71ae5a4SJacob Faibussowitsch {
49533a40ed3dSBarry Smith   PetscFunctionBegin;
49540700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
49559566063dSJacob Faibussowitsch   PetscCall(PetscObjectSetOptionsPrefix((PetscObject)snes, prefix));
49569566063dSJacob Faibussowitsch   if (!snes->ksp) PetscCall(SNESGetKSP(snes, &snes->ksp));
495735f5d045SPeter Brune   if (snes->linesearch) {
49589566063dSJacob Faibussowitsch     PetscCall(SNESGetLineSearch(snes, &snes->linesearch));
49599566063dSJacob Faibussowitsch     PetscCall(PetscObjectSetOptionsPrefix((PetscObject)snes->linesearch, prefix));
496035f5d045SPeter Brune   }
49619566063dSJacob Faibussowitsch   PetscCall(KSPSetOptionsPrefix(snes->ksp, prefix));
49623ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
49633c7409f5SSatish Balay }
49643c7409f5SSatish Balay 
49653c7409f5SSatish Balay /*@C
4966f525115eSLois Curfman McInnes   SNESAppendOptionsPrefix - Appends to the prefix used for searching for all
4967f6dfbefdSBarry Smith   `SNES` options in the database.
49683c7409f5SSatish Balay 
4969c3339decSBarry Smith   Logically Collective
4970fee21e36SBarry Smith 
4971c7afd0dbSLois Curfman McInnes   Input Parameters:
4972f6dfbefdSBarry Smith + snes   - the `SNES` context
4973c7afd0dbSLois Curfman McInnes - prefix - the prefix to prepend to all option names
4974c7afd0dbSLois Curfman McInnes 
4975dc4c0fb0SBarry Smith   Level: advanced
4976dc4c0fb0SBarry Smith 
4977f6dfbefdSBarry Smith   Note:
4978a83b1b31SSatish Balay   A hyphen (-) must NOT be given at the beginning of the prefix name.
4979c7afd0dbSLois Curfman McInnes   The first character of all runtime options is AUTOMATICALLY the hyphen.
4980d850072dSLois Curfman McInnes 
49811cc06b55SBarry Smith .seealso: [](ch_snes), `SNESGetOptionsPrefix()`, `SNESSetOptionsPrefix()`
49823c7409f5SSatish Balay @*/
4983d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESAppendOptionsPrefix(SNES snes, const char prefix[])
4984d71ae5a4SJacob Faibussowitsch {
49853a40ed3dSBarry Smith   PetscFunctionBegin;
49860700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
49879566063dSJacob Faibussowitsch   PetscCall(PetscObjectAppendOptionsPrefix((PetscObject)snes, prefix));
49889566063dSJacob Faibussowitsch   if (!snes->ksp) PetscCall(SNESGetKSP(snes, &snes->ksp));
498935f5d045SPeter Brune   if (snes->linesearch) {
49909566063dSJacob Faibussowitsch     PetscCall(SNESGetLineSearch(snes, &snes->linesearch));
49919566063dSJacob Faibussowitsch     PetscCall(PetscObjectAppendOptionsPrefix((PetscObject)snes->linesearch, prefix));
499235f5d045SPeter Brune   }
49939566063dSJacob Faibussowitsch   PetscCall(KSPAppendOptionsPrefix(snes->ksp, prefix));
49943ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
49953c7409f5SSatish Balay }
49963c7409f5SSatish Balay 
49979ab63eb5SSatish Balay /*@C
4998f6dfbefdSBarry Smith   SNESGetOptionsPrefix - Gets the prefix used for searching for all
4999f6dfbefdSBarry Smith   `SNES` options in the database.
50003c7409f5SSatish Balay 
5001c7afd0dbSLois Curfman McInnes   Not Collective
5002c7afd0dbSLois Curfman McInnes 
50033c7409f5SSatish Balay   Input Parameter:
5004f6dfbefdSBarry Smith . snes - the `SNES` context
50053c7409f5SSatish Balay 
50063c7409f5SSatish Balay   Output Parameter:
50073c7409f5SSatish Balay . prefix - pointer to the prefix string used
50083c7409f5SSatish Balay 
500936851e7fSLois Curfman McInnes   Level: advanced
501036851e7fSLois Curfman McInnes 
5011*e4094ef1SJacob Faibussowitsch   Fortran Notes:
5012dc4c0fb0SBarry Smith   The user should pass in a string 'prefix' of
5013dc4c0fb0SBarry Smith   sufficient length to hold the prefix.
5014dc4c0fb0SBarry Smith 
50151cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetOptionsPrefix()`, `SNESAppendOptionsPrefix()`
50163c7409f5SSatish Balay @*/
5017d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetOptionsPrefix(SNES snes, const char *prefix[])
5018d71ae5a4SJacob Faibussowitsch {
50193a40ed3dSBarry Smith   PetscFunctionBegin;
50200700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
50219566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetOptionsPrefix((PetscObject)snes, prefix));
50223ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
50233c7409f5SSatish Balay }
50243c7409f5SSatish Balay 
50253cea93caSBarry Smith /*@C
50261c84c290SBarry Smith   SNESRegister - Adds a method to the nonlinear solver package.
50271c84c290SBarry Smith 
502820f4b53cSBarry Smith   Not Collective
50291c84c290SBarry Smith 
50301c84c290SBarry Smith   Input Parameters:
503120f4b53cSBarry Smith + sname    - name of a new user-defined solver
503220f4b53cSBarry Smith - function - routine to create method context
50331c84c290SBarry Smith 
5034dc4c0fb0SBarry Smith   Level: advanced
5035dc4c0fb0SBarry Smith 
5036f6dfbefdSBarry Smith   Note:
5037f6dfbefdSBarry Smith   `SNESRegister()` may be called multiple times to add several user-defined solvers.
50381c84c290SBarry Smith 
5039*e4094ef1SJacob Faibussowitsch   Example Usage:
50401c84c290SBarry Smith .vb
5041bdf89e91SBarry Smith    SNESRegister("my_solver", MySolverCreate);
50421c84c290SBarry Smith .ve
50431c84c290SBarry Smith 
50441c84c290SBarry Smith   Then, your solver can be chosen with the procedural interface via
50451c84c290SBarry Smith $     SNESSetType(snes, "my_solver")
50461c84c290SBarry Smith   or at runtime via the option
50471c84c290SBarry Smith $     -snes_type my_solver
50481c84c290SBarry Smith 
50491cc06b55SBarry Smith .seealso: [](ch_snes), `SNESRegisterAll()`, `SNESRegisterDestroy()`
50503cea93caSBarry Smith @*/
5051d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESRegister(const char sname[], PetscErrorCode (*function)(SNES))
5052d71ae5a4SJacob Faibussowitsch {
5053b2002411SLois Curfman McInnes   PetscFunctionBegin;
50549566063dSJacob Faibussowitsch   PetscCall(SNESInitializePackage());
50559566063dSJacob Faibussowitsch   PetscCall(PetscFunctionListAdd(&SNESList, sname, function));
50563ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
5057b2002411SLois Curfman McInnes }
5058da9b6338SBarry Smith 
5059d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESTestLocalMin(SNES snes)
5060d71ae5a4SJacob Faibussowitsch {
506177431f27SBarry Smith   PetscInt    N, i, j;
5062da9b6338SBarry Smith   Vec         u, uh, fh;
5063da9b6338SBarry Smith   PetscScalar value;
5064da9b6338SBarry Smith   PetscReal   norm;
5065da9b6338SBarry Smith 
5066da9b6338SBarry Smith   PetscFunctionBegin;
50679566063dSJacob Faibussowitsch   PetscCall(SNESGetSolution(snes, &u));
50689566063dSJacob Faibussowitsch   PetscCall(VecDuplicate(u, &uh));
50699566063dSJacob Faibussowitsch   PetscCall(VecDuplicate(u, &fh));
5070da9b6338SBarry Smith 
5071da9b6338SBarry Smith   /* currently only works for sequential */
50729566063dSJacob Faibussowitsch   PetscCall(PetscPrintf(PetscObjectComm((PetscObject)snes), "Testing FormFunction() for local min\n"));
50739566063dSJacob Faibussowitsch   PetscCall(VecGetSize(u, &N));
5074da9b6338SBarry Smith   for (i = 0; i < N; i++) {
50759566063dSJacob Faibussowitsch     PetscCall(VecCopy(u, uh));
507663a3b9bcSJacob Faibussowitsch     PetscCall(PetscPrintf(PetscObjectComm((PetscObject)snes), "i = %" PetscInt_FMT "\n", i));
5077da9b6338SBarry Smith     for (j = -10; j < 11; j++) {
50788b49ba18SBarry Smith       value = PetscSign(j) * PetscExpReal(PetscAbs(j) - 10.0);
50799566063dSJacob Faibussowitsch       PetscCall(VecSetValue(uh, i, value, ADD_VALUES));
50809566063dSJacob Faibussowitsch       PetscCall(SNESComputeFunction(snes, uh, fh));
50819566063dSJacob Faibussowitsch       PetscCall(VecNorm(fh, NORM_2, &norm));
508263a3b9bcSJacob Faibussowitsch       PetscCall(PetscPrintf(PetscObjectComm((PetscObject)snes), "       j norm %" PetscInt_FMT " %18.16e\n", j, (double)norm));
5083da9b6338SBarry Smith       value = -value;
50849566063dSJacob Faibussowitsch       PetscCall(VecSetValue(uh, i, value, ADD_VALUES));
5085da9b6338SBarry Smith     }
5086da9b6338SBarry Smith   }
50879566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&uh));
50889566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&fh));
50893ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
5090da9b6338SBarry Smith }
509171f87433Sdalcinl 
509271f87433Sdalcinl /*@
5093f6dfbefdSBarry Smith   SNESKSPSetUseEW - Sets `SNES` to the use Eisenstat-Walker method for
509471f87433Sdalcinl   computing relative tolerance for linear solvers within an inexact
509571f87433Sdalcinl   Newton method.
509671f87433Sdalcinl 
5097c3339decSBarry Smith   Logically Collective
509871f87433Sdalcinl 
509971f87433Sdalcinl   Input Parameters:
5100f6dfbefdSBarry Smith + snes - `SNES` context
5101f6dfbefdSBarry Smith - flag - `PETSC_TRUE` or `PETSC_FALSE`
510271f87433Sdalcinl 
5103f6dfbefdSBarry Smith   Options Database Keys:
510464ba62caSBarry Smith + -snes_ksp_ew                       - use Eisenstat-Walker method for determining linear system convergence
510564ba62caSBarry Smith . -snes_ksp_ew_version ver           - version of  Eisenstat-Walker method
510664ba62caSBarry Smith . -snes_ksp_ew_rtol0 <rtol0>         - Sets rtol0
510764ba62caSBarry Smith . -snes_ksp_ew_rtolmax <rtolmax>     - Sets rtolmax
510864ba62caSBarry Smith . -snes_ksp_ew_gamma <gamma>         - Sets gamma
510964ba62caSBarry Smith . -snes_ksp_ew_alpha <alpha>         - Sets alpha
511064ba62caSBarry Smith . -snes_ksp_ew_alpha2 <alpha2>       - Sets alpha2
511164ba62caSBarry Smith - -snes_ksp_ew_threshold <threshold> - Sets threshold
511264ba62caSBarry Smith 
5113dc4c0fb0SBarry Smith   Level: advanced
5114dc4c0fb0SBarry Smith 
5115f6dfbefdSBarry Smith   Note:
5116f6dfbefdSBarry Smith   The default is to use a constant relative tolerance for
511771f87433Sdalcinl   the inner linear solvers.  Alternatively, one can use the
511871f87433Sdalcinl   Eisenstat-Walker method, where the relative convergence tolerance
511971f87433Sdalcinl   is reset at each Newton iteration according progress of the nonlinear
512071f87433Sdalcinl   solver.
512171f87433Sdalcinl 
5122*e4094ef1SJacob Faibussowitsch   References:
5123f6dfbefdSBarry Smith .  - * S. C. Eisenstat and H. F. Walker, "Choosing the forcing terms in an inexact Newton method", SISC 17 (1), pp.16-32, 1996.
512471f87433Sdalcinl 
51251cc06b55SBarry Smith .seealso: [](ch_snes), `KSP`, `SNES`, `SNESKSPGetUseEW()`, `SNESKSPGetParametersEW()`, `SNESKSPSetParametersEW()`
512671f87433Sdalcinl @*/
5127d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESKSPSetUseEW(SNES snes, PetscBool flag)
5128d71ae5a4SJacob Faibussowitsch {
512971f87433Sdalcinl   PetscFunctionBegin;
51300700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5131acfcf0e5SJed Brown   PetscValidLogicalCollectiveBool(snes, flag, 2);
513271f87433Sdalcinl   snes->ksp_ewconv = flag;
51333ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
513471f87433Sdalcinl }
513571f87433Sdalcinl 
513671f87433Sdalcinl /*@
5137f6dfbefdSBarry Smith   SNESKSPGetUseEW - Gets if `SNES` is using Eisenstat-Walker method
513871f87433Sdalcinl   for computing relative tolerance for linear solvers within an
513971f87433Sdalcinl   inexact Newton method.
514071f87433Sdalcinl 
514171f87433Sdalcinl   Not Collective
514271f87433Sdalcinl 
514371f87433Sdalcinl   Input Parameter:
5144f6dfbefdSBarry Smith . snes - `SNES` context
514571f87433Sdalcinl 
514671f87433Sdalcinl   Output Parameter:
5147f6dfbefdSBarry Smith . flag - `PETSC_TRUE` or `PETSC_FALSE`
514871f87433Sdalcinl 
514971f87433Sdalcinl   Level: advanced
515071f87433Sdalcinl 
51511cc06b55SBarry Smith .seealso: [](ch_snes), `SNESKSPSetUseEW()`, `SNESKSPGetParametersEW()`, `SNESKSPSetParametersEW()`
515271f87433Sdalcinl @*/
5153d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESKSPGetUseEW(SNES snes, PetscBool *flag)
5154d71ae5a4SJacob Faibussowitsch {
515571f87433Sdalcinl   PetscFunctionBegin;
51560700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5157534a8f05SLisandro Dalcin   PetscValidBoolPointer(flag, 2);
515871f87433Sdalcinl   *flag = snes->ksp_ewconv;
51593ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
516071f87433Sdalcinl }
516171f87433Sdalcinl 
516271f87433Sdalcinl /*@
5163fa9f3622SBarry Smith   SNESKSPSetParametersEW - Sets parameters for Eisenstat-Walker
516471f87433Sdalcinl   convergence criteria for the linear solvers within an inexact
516571f87433Sdalcinl   Newton method.
516671f87433Sdalcinl 
5167c3339decSBarry Smith   Logically Collective
516871f87433Sdalcinl 
516971f87433Sdalcinl   Input Parameters:
5170f6dfbefdSBarry Smith + snes      - `SNES` context
51710f0abf79SStefano Zampini . version   - version 1, 2 (default is 2), 3 or 4
517271f87433Sdalcinl . rtol_0    - initial relative tolerance (0 <= rtol_0 < 1)
517371f87433Sdalcinl . rtol_max  - maximum relative tolerance (0 <= rtol_max < 1)
517471f87433Sdalcinl . gamma     - multiplicative factor for version 2 rtol computation
517571f87433Sdalcinl              (0 <= gamma2 <= 1)
517671f87433Sdalcinl . alpha     - power for version 2 rtol computation (1 < alpha <= 2)
517771f87433Sdalcinl . alpha2    - power for safeguard
517871f87433Sdalcinl - threshold - threshold for imposing safeguard (0 < threshold < 1)
517971f87433Sdalcinl 
5180dc4c0fb0SBarry Smith   Level: advanced
5181dc4c0fb0SBarry Smith 
5182f6dfbefdSBarry Smith   Notes:
518371f87433Sdalcinl   Version 3 was contributed by Luis Chacon, June 2006.
518471f87433Sdalcinl 
5185f6dfbefdSBarry Smith   Use `PETSC_DEFAULT` to retain the default for any of the parameters.
518671f87433Sdalcinl 
51871cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESKSPSetUseEW()`, `SNESKSPGetUseEW()`, `SNESKSPGetParametersEW()`
518871f87433Sdalcinl @*/
5189d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESKSPSetParametersEW(SNES snes, PetscInt version, PetscReal rtol_0, PetscReal rtol_max, PetscReal gamma, PetscReal alpha, PetscReal alpha2, PetscReal threshold)
5190d71ae5a4SJacob Faibussowitsch {
5191fa9f3622SBarry Smith   SNESKSPEW *kctx;
51925fd66863SKarl Rupp 
519371f87433Sdalcinl   PetscFunctionBegin;
51940700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5195fa9f3622SBarry Smith   kctx = (SNESKSPEW *)snes->kspconvctx;
51965f80ce2aSJacob Faibussowitsch   PetscCheck(kctx, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "No Eisenstat-Walker context existing");
5197c5eb9154SBarry Smith   PetscValidLogicalCollectiveInt(snes, version, 2);
5198c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, rtol_0, 3);
5199c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, rtol_max, 4);
5200c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, gamma, 5);
5201c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, alpha, 6);
5202c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, alpha2, 7);
5203c5eb9154SBarry Smith   PetscValidLogicalCollectiveReal(snes, threshold, 8);
520471f87433Sdalcinl 
520571f87433Sdalcinl   if (version != PETSC_DEFAULT) kctx->version = version;
520613bcc0bdSJacob Faibussowitsch   if (rtol_0 != (PetscReal)PETSC_DEFAULT) kctx->rtol_0 = rtol_0;
520713bcc0bdSJacob Faibussowitsch   if (rtol_max != (PetscReal)PETSC_DEFAULT) kctx->rtol_max = rtol_max;
520813bcc0bdSJacob Faibussowitsch   if (gamma != (PetscReal)PETSC_DEFAULT) kctx->gamma = gamma;
520913bcc0bdSJacob Faibussowitsch   if (alpha != (PetscReal)PETSC_DEFAULT) kctx->alpha = alpha;
521013bcc0bdSJacob Faibussowitsch   if (alpha2 != (PetscReal)PETSC_DEFAULT) kctx->alpha2 = alpha2;
521113bcc0bdSJacob Faibussowitsch   if (threshold != (PetscReal)PETSC_DEFAULT) kctx->threshold = threshold;
521271f87433Sdalcinl 
52130f0abf79SStefano Zampini   PetscCheck(kctx->version >= 1 && kctx->version <= 4, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Only versions 1 to 4 are supported: %" PetscInt_FMT, kctx->version);
52140b121fc5SBarry Smith   PetscCheck(kctx->rtol_0 >= 0.0 && kctx->rtol_0 < 1.0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "0.0 <= rtol_0 < 1.0: %g", (double)kctx->rtol_0);
52150b121fc5SBarry Smith   PetscCheck(kctx->rtol_max >= 0.0 && kctx->rtol_max < 1.0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "0.0 <= rtol_max (%g) < 1.0", (double)kctx->rtol_max);
52160b121fc5SBarry Smith   PetscCheck(kctx->gamma >= 0.0 && kctx->gamma <= 1.0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "0.0 <= gamma (%g) <= 1.0", (double)kctx->gamma);
52170b121fc5SBarry Smith   PetscCheck(kctx->alpha > 1.0 && kctx->alpha <= 2.0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "1.0 < alpha (%g) <= 2.0", (double)kctx->alpha);
52180b121fc5SBarry Smith   PetscCheck(kctx->threshold > 0.0 && kctx->threshold < 1.0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "0.0 < threshold (%g) < 1.0", (double)kctx->threshold);
52193ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
522071f87433Sdalcinl }
522171f87433Sdalcinl 
522271f87433Sdalcinl /*@
5223fa9f3622SBarry Smith   SNESKSPGetParametersEW - Gets parameters for Eisenstat-Walker
522471f87433Sdalcinl   convergence criteria for the linear solvers within an inexact
522571f87433Sdalcinl   Newton method.
522671f87433Sdalcinl 
522771f87433Sdalcinl   Not Collective
522871f87433Sdalcinl 
522997bb3fdcSJose E. Roman   Input Parameter:
5230f6dfbefdSBarry Smith . snes - `SNES` context
523171f87433Sdalcinl 
523271f87433Sdalcinl   Output Parameters:
52330f0abf79SStefano Zampini + version   - version 1, 2 (default is 2), 3 or 4
523471f87433Sdalcinl . rtol_0    - initial relative tolerance (0 <= rtol_0 < 1)
523571f87433Sdalcinl . rtol_max  - maximum relative tolerance (0 <= rtol_max < 1)
5236bf388a1fSBarry Smith . gamma     - multiplicative factor for version 2 rtol computation (0 <= gamma2 <= 1)
523771f87433Sdalcinl . alpha     - power for version 2 rtol computation (1 < alpha <= 2)
523871f87433Sdalcinl . alpha2    - power for safeguard
523971f87433Sdalcinl - threshold - threshold for imposing safeguard (0 < threshold < 1)
524071f87433Sdalcinl 
524171f87433Sdalcinl   Level: advanced
524271f87433Sdalcinl 
52431cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESKSPSetUseEW()`, `SNESKSPGetUseEW()`, `SNESKSPSetParametersEW()`
524471f87433Sdalcinl @*/
5245d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESKSPGetParametersEW(SNES snes, PetscInt *version, PetscReal *rtol_0, PetscReal *rtol_max, PetscReal *gamma, PetscReal *alpha, PetscReal *alpha2, PetscReal *threshold)
5246d71ae5a4SJacob Faibussowitsch {
5247fa9f3622SBarry Smith   SNESKSPEW *kctx;
52485fd66863SKarl Rupp 
524971f87433Sdalcinl   PetscFunctionBegin;
52500700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5251fa9f3622SBarry Smith   kctx = (SNESKSPEW *)snes->kspconvctx;
52525f80ce2aSJacob Faibussowitsch   PetscCheck(kctx, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "No Eisenstat-Walker context existing");
525371f87433Sdalcinl   if (version) *version = kctx->version;
525471f87433Sdalcinl   if (rtol_0) *rtol_0 = kctx->rtol_0;
525571f87433Sdalcinl   if (rtol_max) *rtol_max = kctx->rtol_max;
525671f87433Sdalcinl   if (gamma) *gamma = kctx->gamma;
525771f87433Sdalcinl   if (alpha) *alpha = kctx->alpha;
525871f87433Sdalcinl   if (alpha2) *alpha2 = kctx->alpha2;
525971f87433Sdalcinl   if (threshold) *threshold = kctx->threshold;
52603ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
526171f87433Sdalcinl }
526271f87433Sdalcinl 
5263d71ae5a4SJacob Faibussowitsch PetscErrorCode KSPPreSolve_SNESEW(KSP ksp, Vec b, Vec x, SNES snes)
5264d71ae5a4SJacob Faibussowitsch {
5265fa9f3622SBarry Smith   SNESKSPEW *kctx = (SNESKSPEW *)snes->kspconvctx;
526671f87433Sdalcinl   PetscReal  rtol = PETSC_DEFAULT, stol;
526771f87433Sdalcinl 
526871f87433Sdalcinl   PetscFunctionBegin;
52693ba16761SJacob Faibussowitsch   if (!snes->ksp_ewconv) PetscFunctionReturn(PETSC_SUCCESS);
527030058271SDmitry Karpeev   if (!snes->iter) {
527130058271SDmitry Karpeev     rtol = kctx->rtol_0; /* first time in, so use the original user rtol */
52729566063dSJacob Faibussowitsch     PetscCall(VecNorm(snes->vec_func, NORM_2, &kctx->norm_first));
52730f0abf79SStefano Zampini   } else {
52740fdf79fbSJacob Faibussowitsch     PetscCheck(kctx->version >= 1 && kctx->version <= 4, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Only versions 1-4 are supported: %" PetscInt_FMT, kctx->version);
527571f87433Sdalcinl     if (kctx->version == 1) {
52760f0abf79SStefano Zampini       rtol = PetscAbsReal(snes->norm - kctx->lresid_last) / kctx->norm_last;
527785ec1a3cSBarry Smith       stol = PetscPowReal(kctx->rtol_last, kctx->alpha2);
527871f87433Sdalcinl       if (stol > kctx->threshold) rtol = PetscMax(rtol, stol);
527971f87433Sdalcinl     } else if (kctx->version == 2) {
528085ec1a3cSBarry Smith       rtol = kctx->gamma * PetscPowReal(snes->norm / kctx->norm_last, kctx->alpha);
528185ec1a3cSBarry Smith       stol = kctx->gamma * PetscPowReal(kctx->rtol_last, kctx->alpha);
528271f87433Sdalcinl       if (stol > kctx->threshold) rtol = PetscMax(rtol, stol);
528371f87433Sdalcinl     } else if (kctx->version == 3) { /* contributed by Luis Chacon, June 2006. */
528485ec1a3cSBarry Smith       rtol = kctx->gamma * PetscPowReal(snes->norm / kctx->norm_last, kctx->alpha);
528571f87433Sdalcinl       /* safeguard: avoid sharp decrease of rtol */
528685ec1a3cSBarry Smith       stol = kctx->gamma * PetscPowReal(kctx->rtol_last, kctx->alpha);
528771f87433Sdalcinl       stol = PetscMax(rtol, stol);
528871f87433Sdalcinl       rtol = PetscMin(kctx->rtol_0, stol);
528971f87433Sdalcinl       /* safeguard: avoid oversolving */
529030058271SDmitry Karpeev       stol = kctx->gamma * (kctx->norm_first * snes->rtol) / snes->norm;
529171f87433Sdalcinl       stol = PetscMax(rtol, stol);
529271f87433Sdalcinl       rtol = PetscMin(kctx->rtol_0, stol);
52930fdf79fbSJacob Faibussowitsch     } else /* if (kctx->version == 4) */ {
52940fdf79fbSJacob Faibussowitsch       /* H.-B. An et al. Journal of Computational and Applied Mathematics 200 (2007) 47-60 */
52950f0abf79SStefano Zampini       PetscReal ared = PetscAbsReal(kctx->norm_last - snes->norm);
52960f0abf79SStefano Zampini       PetscReal pred = PetscAbsReal(kctx->norm_last - kctx->lresid_last);
52970f0abf79SStefano Zampini       PetscReal rk   = ared / pred;
52980f0abf79SStefano Zampini       if (rk < kctx->v4_p1) rtol = 1. - 2. * kctx->v4_p1;
52990f0abf79SStefano Zampini       else if (rk < kctx->v4_p2) rtol = kctx->rtol_last;
53000f0abf79SStefano Zampini       else if (rk < kctx->v4_p3) rtol = kctx->v4_m1 * kctx->rtol_last;
53010f0abf79SStefano Zampini       else rtol = kctx->v4_m2 * kctx->rtol_last;
53020f0abf79SStefano Zampini 
5303a4598233SStefano Zampini       if (kctx->rtol_last_2 > kctx->v4_m3 && kctx->rtol_last > kctx->v4_m3 && kctx->rk_last_2 < kctx->v4_p1 && kctx->rk_last < kctx->v4_p1) rtol = kctx->v4_m4 * kctx->rtol_last;
53040f0abf79SStefano Zampini       kctx->rtol_last_2 = kctx->rtol_last;
53050f0abf79SStefano Zampini       kctx->rk_last_2   = kctx->rk_last;
53060f0abf79SStefano Zampini       kctx->rk_last     = rk;
53070fdf79fbSJacob Faibussowitsch     }
53080f0abf79SStefano Zampini   }
53090f0abf79SStefano Zampini   /* safeguard: avoid rtol greater than rtol_max */
531071f87433Sdalcinl   rtol = PetscMin(rtol, kctx->rtol_max);
53119566063dSJacob Faibussowitsch   PetscCall(KSPSetTolerances(ksp, rtol, PETSC_DEFAULT, PETSC_DEFAULT, PETSC_DEFAULT));
531263a3b9bcSJacob Faibussowitsch   PetscCall(PetscInfo(snes, "iter %" PetscInt_FMT ", Eisenstat-Walker (version %" PetscInt_FMT ") KSP rtol=%g\n", snes->iter, kctx->version, (double)rtol));
53133ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
531471f87433Sdalcinl }
531571f87433Sdalcinl 
5316d71ae5a4SJacob Faibussowitsch PetscErrorCode KSPPostSolve_SNESEW(KSP ksp, Vec b, Vec x, SNES snes)
5317d71ae5a4SJacob Faibussowitsch {
5318fa9f3622SBarry Smith   SNESKSPEW *kctx = (SNESKSPEW *)snes->kspconvctx;
531971f87433Sdalcinl   PCSide     pcside;
532071f87433Sdalcinl   Vec        lres;
532171f87433Sdalcinl 
532271f87433Sdalcinl   PetscFunctionBegin;
53233ba16761SJacob Faibussowitsch   if (!snes->ksp_ewconv) PetscFunctionReturn(PETSC_SUCCESS);
53249566063dSJacob Faibussowitsch   PetscCall(KSPGetTolerances(ksp, &kctx->rtol_last, NULL, NULL, NULL));
532571dbe336SPeter Brune   kctx->norm_last = snes->norm;
53260f0abf79SStefano Zampini   if (kctx->version == 1 || kctx->version == 4) {
53274f00ce20SMatthew G. Knepley     PC        pc;
53280f0abf79SStefano Zampini     PetscBool getRes;
53294f00ce20SMatthew G. Knepley 
53309566063dSJacob Faibussowitsch     PetscCall(KSPGetPC(ksp, &pc));
53310f0abf79SStefano Zampini     PetscCall(PetscObjectTypeCompare((PetscObject)pc, PCNONE, &getRes));
53320f0abf79SStefano Zampini     if (!getRes) {
53330f0abf79SStefano Zampini       KSPNormType normtype;
53340f0abf79SStefano Zampini 
53350f0abf79SStefano Zampini       PetscCall(KSPGetNormType(ksp, &normtype));
53360f0abf79SStefano Zampini       getRes = (PetscBool)(normtype == KSP_NORM_UNPRECONDITIONED);
53370f0abf79SStefano Zampini     }
53389566063dSJacob Faibussowitsch     PetscCall(KSPGetPCSide(ksp, &pcside));
53390f0abf79SStefano Zampini     if (pcside == PC_RIGHT || getRes) { /* KSP residual is true linear residual */
53409566063dSJacob Faibussowitsch       PetscCall(KSPGetResidualNorm(ksp, &kctx->lresid_last));
534171f87433Sdalcinl     } else {
534271f87433Sdalcinl       /* KSP residual is preconditioned residual */
534371f87433Sdalcinl       /* compute true linear residual norm */
53440f0abf79SStefano Zampini       Mat J;
53450f0abf79SStefano Zampini       PetscCall(KSPGetOperators(ksp, &J, NULL));
53469566063dSJacob Faibussowitsch       PetscCall(VecDuplicate(b, &lres));
53470f0abf79SStefano Zampini       PetscCall(MatMult(J, x, lres));
53489566063dSJacob Faibussowitsch       PetscCall(VecAYPX(lres, -1.0, b));
53499566063dSJacob Faibussowitsch       PetscCall(VecNorm(lres, NORM_2, &kctx->lresid_last));
53509566063dSJacob Faibussowitsch       PetscCall(VecDestroy(&lres));
535171f87433Sdalcinl     }
535271f87433Sdalcinl   }
53533ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
535471f87433Sdalcinl }
535571f87433Sdalcinl 
5356d4211eb9SBarry Smith /*@
5357f6dfbefdSBarry Smith   SNESGetKSP - Returns the `KSP` context for a `SNES` solver.
5358d4211eb9SBarry Smith 
5359f6dfbefdSBarry Smith   Not Collective, but if snes is parallel, then ksp is parallel
5360d4211eb9SBarry Smith 
5361d4211eb9SBarry Smith   Input Parameter:
5362f6dfbefdSBarry Smith . snes - the `SNES` context
5363d4211eb9SBarry Smith 
5364d4211eb9SBarry Smith   Output Parameter:
5365f6dfbefdSBarry Smith . ksp - the `KSP` context
5366d4211eb9SBarry Smith 
5367dc4c0fb0SBarry Smith   Level: beginner
5368dc4c0fb0SBarry Smith 
5369d4211eb9SBarry Smith   Notes:
5370f6dfbefdSBarry Smith   The user can then directly manipulate the `KSP` context to set various
5371d4211eb9SBarry Smith   options, etc.  Likewise, the user can then extract and manipulate the
5372f6dfbefdSBarry Smith   `PC` contexts as well.
5373f6dfbefdSBarry Smith 
5374f6dfbefdSBarry Smith   Some `SNESType`s do not use a `KSP` but a `KSP` is still returned by this function
5375d4211eb9SBarry Smith 
53761cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `KSP`, `PC`, `KSPGetPC()`, `SNESCreate()`, `KSPCreate()`, `SNESSetKSP()`
5377d4211eb9SBarry Smith @*/
5378d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetKSP(SNES snes, KSP *ksp)
5379d71ae5a4SJacob Faibussowitsch {
538071f87433Sdalcinl   PetscFunctionBegin;
5381d4211eb9SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5382d4211eb9SBarry Smith   PetscValidPointer(ksp, 2);
5383d4211eb9SBarry Smith 
5384d4211eb9SBarry Smith   if (!snes->ksp) {
53859566063dSJacob Faibussowitsch     PetscCall(KSPCreate(PetscObjectComm((PetscObject)snes), &snes->ksp));
53869566063dSJacob Faibussowitsch     PetscCall(PetscObjectIncrementTabLevel((PetscObject)snes->ksp, (PetscObject)snes, 1));
5387d4211eb9SBarry Smith 
53889566063dSJacob Faibussowitsch     PetscCall(KSPSetPreSolve(snes->ksp, (PetscErrorCode(*)(KSP, Vec, Vec, void *))KSPPreSolve_SNESEW, snes));
53899566063dSJacob Faibussowitsch     PetscCall(KSPSetPostSolve(snes->ksp, (PetscErrorCode(*)(KSP, Vec, Vec, void *))KSPPostSolve_SNESEW, snes));
5390a5c2985bSBarry Smith 
53919566063dSJacob Faibussowitsch     PetscCall(KSPMonitorSetFromOptions(snes->ksp, "-snes_monitor_ksp", "snes_preconditioned_residual", snes));
53929566063dSJacob Faibussowitsch     PetscCall(PetscObjectSetOptions((PetscObject)snes->ksp, ((PetscObject)snes)->options));
5393d4211eb9SBarry Smith   }
5394d4211eb9SBarry Smith   *ksp = snes->ksp;
53953ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
539671f87433Sdalcinl }
53976c699258SBarry Smith 
5398af0996ceSBarry Smith #include <petsc/private/dmimpl.h>
53996c699258SBarry Smith /*@
5400f6dfbefdSBarry Smith   SNESSetDM - Sets the `DM` that may be used by some nonlinear solvers or their underlying preconditioners
54016c699258SBarry Smith 
5402c3339decSBarry Smith   Logically Collective
54036c699258SBarry Smith 
54046c699258SBarry Smith   Input Parameters:
54052a808120SBarry Smith + snes - the nonlinear solver context
5406dc4c0fb0SBarry Smith - dm   - the dm, cannot be `NULL`
5407dc4c0fb0SBarry Smith 
5408dc4c0fb0SBarry Smith   Level: intermediate
54096c699258SBarry Smith 
5410f6dfbefdSBarry Smith   Note:
5411f6dfbefdSBarry Smith   A `DM` can only be used for solving one problem at a time because information about the problem is stored on the `DM`,
5412f6dfbefdSBarry Smith   even when not using interfaces like `DMSNESSetFunction()`.  Use `DMClone()` to get a distinct `DM` when solving different
5413e03a659cSJed Brown   problems using the same function space.
5414e03a659cSJed Brown 
54151cc06b55SBarry Smith .seealso: [](ch_snes), `DM`, `SNESGetDM()`, `KSPSetDM()`, `KSPGetDM()`
54166c699258SBarry Smith @*/
5417d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetDM(SNES snes, DM dm)
5418d71ae5a4SJacob Faibussowitsch {
5419345fed2cSBarry Smith   KSP    ksp;
5420942e3340SBarry Smith   DMSNES sdm;
54216c699258SBarry Smith 
54226c699258SBarry Smith   PetscFunctionBegin;
54230700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
54242a808120SBarry Smith   PetscValidHeaderSpecific(dm, DM_CLASSID, 2);
54259566063dSJacob Faibussowitsch   PetscCall(PetscObjectReference((PetscObject)dm));
5426942e3340SBarry Smith   if (snes->dm) { /* Move the DMSNES context over to the new DM unless the new DM already has one */
542751f4b3c7SToby Isaac     if (snes->dm->dmsnes && !dm->dmsnes) {
54289566063dSJacob Faibussowitsch       PetscCall(DMCopyDMSNES(snes->dm, dm));
54299566063dSJacob Faibussowitsch       PetscCall(DMGetDMSNES(snes->dm, &sdm));
5430f5af7f23SKarl Rupp       if (sdm->originaldm == snes->dm) sdm->originaldm = dm; /* Grant write privileges to the replacement DM */
54316cab3a1bSJed Brown     }
54329566063dSJacob Faibussowitsch     PetscCall(DMCoarsenHookRemove(snes->dm, DMCoarsenHook_SNESVecSol, DMRestrictHook_SNESVecSol, snes));
54339566063dSJacob Faibussowitsch     PetscCall(DMDestroy(&snes->dm));
54346cab3a1bSJed Brown   }
54356c699258SBarry Smith   snes->dm     = dm;
5436116d1032SJed Brown   snes->dmAuto = PETSC_FALSE;
5437f5af7f23SKarl Rupp 
54389566063dSJacob Faibussowitsch   PetscCall(SNESGetKSP(snes, &ksp));
54399566063dSJacob Faibussowitsch   PetscCall(KSPSetDM(ksp, dm));
54409566063dSJacob Faibussowitsch   PetscCall(KSPSetDMActive(ksp, PETSC_FALSE));
5441efd4aadfSBarry Smith   if (snes->npc) {
54429566063dSJacob Faibussowitsch     PetscCall(SNESSetDM(snes->npc, snes->dm));
54439566063dSJacob Faibussowitsch     PetscCall(SNESSetNPCSide(snes, snes->npcside));
54442c155ee1SBarry Smith   }
54453ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
54466c699258SBarry Smith }
54476c699258SBarry Smith 
54486c699258SBarry Smith /*@
5449f6dfbefdSBarry Smith   SNESGetDM - Gets the `DM` that may be used by some preconditioners
54506c699258SBarry Smith 
5451f6dfbefdSBarry Smith   Not Collective but dm obtained is parallel on snes
54526c699258SBarry Smith 
54536c699258SBarry Smith   Input Parameter:
54546c699258SBarry Smith . snes - the preconditioner context
54556c699258SBarry Smith 
54566c699258SBarry Smith   Output Parameter:
54576c699258SBarry Smith . dm - the dm
54586c699258SBarry Smith 
54596c699258SBarry Smith   Level: intermediate
54606c699258SBarry Smith 
54611cc06b55SBarry Smith .seealso: [](ch_snes), `DM`, `SNESSetDM()`, `KSPSetDM()`, `KSPGetDM()`
54626c699258SBarry Smith @*/
5463d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetDM(SNES snes, DM *dm)
5464d71ae5a4SJacob Faibussowitsch {
54656c699258SBarry Smith   PetscFunctionBegin;
54660700a824SBarry Smith   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
54676cab3a1bSJed Brown   if (!snes->dm) {
54689566063dSJacob Faibussowitsch     PetscCall(DMShellCreate(PetscObjectComm((PetscObject)snes), &snes->dm));
5469116d1032SJed Brown     snes->dmAuto = PETSC_TRUE;
54706cab3a1bSJed Brown   }
54716c699258SBarry Smith   *dm = snes->dm;
54723ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
54736c699258SBarry Smith }
54740807856dSBarry Smith 
547531823bd8SMatthew G Knepley /*@
5476be95d8f1SBarry Smith   SNESSetNPC - Sets the nonlinear preconditioner to be used.
547731823bd8SMatthew G Knepley 
5478c3339decSBarry Smith   Collective
547931823bd8SMatthew G Knepley 
548031823bd8SMatthew G Knepley   Input Parameters:
5481f6dfbefdSBarry Smith + snes - iterative context obtained from `SNESCreate()`
5482f6dfbefdSBarry Smith - npc  - the preconditioner object
548331823bd8SMatthew G Knepley 
5484dc4c0fb0SBarry Smith   Level: developer
5485dc4c0fb0SBarry Smith 
548631823bd8SMatthew G Knepley   Notes:
5487f6dfbefdSBarry Smith   Use `SNESGetNPC()` to retrieve the preconditioner context (for example,
548831823bd8SMatthew G Knepley   to configure it using the API).
548931823bd8SMatthew G Knepley 
5490f6dfbefdSBarry Smith   Only some `SNESType` can use a nonlinear preconditioner
5491f6dfbefdSBarry Smith 
54921cc06b55SBarry Smith .seealso: [](ch_snes), `SNESNGS`, `SNESFAS`, `SNESGetNPC()`, `SNESHasNPC()`
549331823bd8SMatthew G Knepley @*/
5494d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetNPC(SNES snes, SNES npc)
5495d71ae5a4SJacob Faibussowitsch {
549631823bd8SMatthew G Knepley   PetscFunctionBegin;
549731823bd8SMatthew G Knepley   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5498f6dfbefdSBarry Smith   PetscValidHeaderSpecific(npc, SNES_CLASSID, 2);
5499f6dfbefdSBarry Smith   PetscCheckSameComm(snes, 1, npc, 2);
5500f6dfbefdSBarry Smith   PetscCall(PetscObjectReference((PetscObject)npc));
55019566063dSJacob Faibussowitsch   PetscCall(SNESDestroy(&snes->npc));
5502f6dfbefdSBarry Smith   snes->npc = npc;
55033ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
550431823bd8SMatthew G Knepley }
550531823bd8SMatthew G Knepley 
550631823bd8SMatthew G Knepley /*@
5507f6dfbefdSBarry Smith   SNESGetNPC - Gets a nonlinear preconditioning solver SNES` to be used to precondition the original nonlinear solver.
550831823bd8SMatthew G Knepley 
5509f6dfbefdSBarry Smith   Not Collective; but any changes to the obtained the npc object must be applied collectively
551031823bd8SMatthew G Knepley 
551131823bd8SMatthew G Knepley   Input Parameter:
5512f6dfbefdSBarry Smith . snes - iterative context obtained from `SNESCreate()`
551331823bd8SMatthew G Knepley 
551431823bd8SMatthew G Knepley   Output Parameter:
5515*e4094ef1SJacob Faibussowitsch . pc - preconditioner context
551631823bd8SMatthew G Knepley 
5517f6dfbefdSBarry Smith   Options Database Key:
5518f6dfbefdSBarry Smith . -npc_snes_type <type> - set the type of the `SNES` to use as the nonlinear preconditioner
5519b5badacbSBarry Smith 
5520dc4c0fb0SBarry Smith   Level: developer
5521dc4c0fb0SBarry Smith 
552295452b02SPatrick Sanan   Notes:
5523f6dfbefdSBarry Smith   If a `SNES` was previously set with `SNESSetNPC()` then that value is returned, otherwise a new `SNES` object is created.
5524be95d8f1SBarry Smith 
5525f6dfbefdSBarry Smith   The (preconditioner) `SNES` returned automatically inherits the same nonlinear function and Jacobian supplied to the original
5526f6dfbefdSBarry Smith   `SNES`
5527951fe5abSBarry Smith 
55281cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetNPC()`, `SNESHasNPC()`, `SNES`, `SNESCreate()`
552931823bd8SMatthew G Knepley @*/
5530d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetNPC(SNES snes, SNES *pc)
5531d71ae5a4SJacob Faibussowitsch {
5532a64e098fSPeter Brune   const char *optionsprefix;
553331823bd8SMatthew G Knepley 
553431823bd8SMatthew G Knepley   PetscFunctionBegin;
553531823bd8SMatthew G Knepley   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
553631823bd8SMatthew G Knepley   PetscValidPointer(pc, 2);
5537efd4aadfSBarry Smith   if (!snes->npc) {
5538ec785e5bSStefano Zampini     void *ctx;
5539ec785e5bSStefano Zampini 
55409566063dSJacob Faibussowitsch     PetscCall(SNESCreate(PetscObjectComm((PetscObject)snes), &snes->npc));
55419566063dSJacob Faibussowitsch     PetscCall(PetscObjectIncrementTabLevel((PetscObject)snes->npc, (PetscObject)snes, 1));
55429566063dSJacob Faibussowitsch     PetscCall(SNESGetOptionsPrefix(snes, &optionsprefix));
55439566063dSJacob Faibussowitsch     PetscCall(SNESSetOptionsPrefix(snes->npc, optionsprefix));
55449566063dSJacob Faibussowitsch     PetscCall(SNESAppendOptionsPrefix(snes->npc, "npc_"));
5545ec785e5bSStefano Zampini     PetscCall(SNESGetApplicationContext(snes, &ctx));
5546ec785e5bSStefano Zampini     PetscCall(SNESSetApplicationContext(snes->npc, ctx));
55479566063dSJacob Faibussowitsch     PetscCall(SNESSetCountersReset(snes->npc, PETSC_FALSE));
554831823bd8SMatthew G Knepley   }
5549efd4aadfSBarry Smith   *pc = snes->npc;
55503ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
555131823bd8SMatthew G Knepley }
555231823bd8SMatthew G Knepley 
55533ad1a0b9SPatrick Farrell /*@
55543ad1a0b9SPatrick Farrell   SNESHasNPC - Returns whether a nonlinear preconditioner exists
55553ad1a0b9SPatrick Farrell 
55563ad1a0b9SPatrick Farrell   Not Collective
55573ad1a0b9SPatrick Farrell 
55583ad1a0b9SPatrick Farrell   Input Parameter:
5559f6dfbefdSBarry Smith . snes - iterative context obtained from `SNESCreate()`
55603ad1a0b9SPatrick Farrell 
55613ad1a0b9SPatrick Farrell   Output Parameter:
5562f6dfbefdSBarry Smith . has_npc - whether the `SNES` has an NPC or not
55633ad1a0b9SPatrick Farrell 
55643ad1a0b9SPatrick Farrell   Level: developer
55653ad1a0b9SPatrick Farrell 
55661cc06b55SBarry Smith .seealso: [](ch_snes), `SNESSetNPC()`, `SNESGetNPC()`
55673ad1a0b9SPatrick Farrell @*/
5568d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESHasNPC(SNES snes, PetscBool *has_npc)
5569d71ae5a4SJacob Faibussowitsch {
55703ad1a0b9SPatrick Farrell   PetscFunctionBegin;
55713ad1a0b9SPatrick Farrell   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5572efd4aadfSBarry Smith   *has_npc = (PetscBool)(snes->npc ? PETSC_TRUE : PETSC_FALSE);
55733ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
55743ad1a0b9SPatrick Farrell }
55753ad1a0b9SPatrick Farrell 
5576c40d0f55SPeter Brune /*@
5577be95d8f1SBarry Smith   SNESSetNPCSide - Sets the preconditioning side.
5578c40d0f55SPeter Brune 
5579c3339decSBarry Smith   Logically Collective
5580c40d0f55SPeter Brune 
5581c40d0f55SPeter Brune   Input Parameter:
5582f6dfbefdSBarry Smith . snes - iterative context obtained from `SNESCreate()`
5583c40d0f55SPeter Brune 
5584c40d0f55SPeter Brune   Output Parameter:
5585c40d0f55SPeter Brune . side - the preconditioning side, where side is one of
5586c40d0f55SPeter Brune .vb
55872d547940SBarry Smith       PC_LEFT - left preconditioning
55882d547940SBarry Smith       PC_RIGHT - right preconditioning (default for most nonlinear solvers)
5589c40d0f55SPeter Brune .ve
5590c40d0f55SPeter Brune 
5591f6dfbefdSBarry Smith   Options Database Key:
559267b8a455SSatish Balay . -snes_npc_side <right,left> - nonlinear preconditioner side
5593c40d0f55SPeter Brune 
5594dc4c0fb0SBarry Smith   Level: intermediate
5595dc4c0fb0SBarry Smith 
5596f6dfbefdSBarry Smith   Note:
5597f6dfbefdSBarry Smith   `SNESNRICHARDSON` and `SNESNCG` only support left preconditioning.
55982d547940SBarry Smith 
55991cc06b55SBarry Smith .seealso: [](ch_snes), `SNESType`, `SNESGetNPCSide()`, `KSPSetPCSide()`
5600c40d0f55SPeter Brune @*/
5601d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetNPCSide(SNES snes, PCSide side)
5602d71ae5a4SJacob Faibussowitsch {
5603c40d0f55SPeter Brune   PetscFunctionBegin;
5604c40d0f55SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5605c40d0f55SPeter Brune   PetscValidLogicalCollectiveEnum(snes, side, 2);
5606b552625fSStefano Zampini   if (side == PC_SIDE_DEFAULT) side = PC_RIGHT;
560754c59aa7SJacob Faibussowitsch   PetscCheck((side == PC_LEFT) || (side == PC_RIGHT), PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_WRONG, "Only PC_LEFT and PC_RIGHT are supported");
5608efd4aadfSBarry Smith   snes->npcside = side;
56093ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
5610c40d0f55SPeter Brune }
5611c40d0f55SPeter Brune 
5612c40d0f55SPeter Brune /*@
5613be95d8f1SBarry Smith   SNESGetNPCSide - Gets the preconditioning side.
5614c40d0f55SPeter Brune 
5615c40d0f55SPeter Brune   Not Collective
5616c40d0f55SPeter Brune 
5617c40d0f55SPeter Brune   Input Parameter:
5618f6dfbefdSBarry Smith . snes - iterative context obtained from `SNESCreate()`
5619c40d0f55SPeter Brune 
5620c40d0f55SPeter Brune   Output Parameter:
5621c40d0f55SPeter Brune . side - the preconditioning side, where side is one of
5622c40d0f55SPeter Brune .vb
5623f6dfbefdSBarry Smith       `PC_LEFT` - left preconditioning
5624f6dfbefdSBarry Smith       `PC_RIGHT` - right preconditioning (default for most nonlinear solvers)
5625c40d0f55SPeter Brune .ve
5626c40d0f55SPeter Brune 
5627c40d0f55SPeter Brune   Level: intermediate
5628c40d0f55SPeter Brune 
56291cc06b55SBarry Smith .seealso: [](ch_snes), `SNES`, `SNESSetNPCSide()`, `KSPGetPCSide()`
5630c40d0f55SPeter Brune @*/
5631d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetNPCSide(SNES snes, PCSide *side)
5632d71ae5a4SJacob Faibussowitsch {
5633c40d0f55SPeter Brune   PetscFunctionBegin;
5634c40d0f55SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5635c40d0f55SPeter Brune   PetscValidPointer(side, 2);
5636efd4aadfSBarry Smith   *side = snes->npcside;
56373ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
5638c40d0f55SPeter Brune }
5639c40d0f55SPeter Brune 
56409e764e56SPeter Brune /*@
5641f6dfbefdSBarry Smith   SNESSetLineSearch - Sets the linesearch on the `SNES` instance.
56429e764e56SPeter Brune 
5643c3339decSBarry Smith   Collective
56449e764e56SPeter Brune 
56459e764e56SPeter Brune   Input Parameters:
5646f6dfbefdSBarry Smith + snes       - iterative context obtained from `SNESCreate()`
56479e764e56SPeter Brune - linesearch - the linesearch object
56489e764e56SPeter Brune 
5649dc4c0fb0SBarry Smith   Level: developer
5650dc4c0fb0SBarry Smith 
5651f6dfbefdSBarry Smith   Note:
5652f6dfbefdSBarry Smith   Use `SNESGetLineSearch()` to retrieve the preconditioner context (for example,
56539e764e56SPeter Brune   to configure it using the API).
56549e764e56SPeter Brune 
56551cc06b55SBarry Smith .seealso: [](ch_snes), `SNESGetLineSearch()`
56569e764e56SPeter Brune @*/
5657d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESSetLineSearch(SNES snes, SNESLineSearch linesearch)
5658d71ae5a4SJacob Faibussowitsch {
56599e764e56SPeter Brune   PetscFunctionBegin;
56609e764e56SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5661f1c6b773SPeter Brune   PetscValidHeaderSpecific(linesearch, SNESLINESEARCH_CLASSID, 2);
56629e764e56SPeter Brune   PetscCheckSameComm(snes, 1, linesearch, 2);
56639566063dSJacob Faibussowitsch   PetscCall(PetscObjectReference((PetscObject)linesearch));
56649566063dSJacob Faibussowitsch   PetscCall(SNESLineSearchDestroy(&snes->linesearch));
5665f5af7f23SKarl Rupp 
56669e764e56SPeter Brune   snes->linesearch = linesearch;
5667f5af7f23SKarl Rupp 
56683ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
56699e764e56SPeter Brune }
56709e764e56SPeter Brune 
5671a34ceb2aSJed Brown /*@
5672dc4c0fb0SBarry Smith   SNESGetLineSearch - Returns the line search context set with `SNESSetLineSearch()`
5673f6dfbefdSBarry Smith   or creates a default line search instance associated with the `SNES` and returns it.
56749e764e56SPeter Brune 
56759e764e56SPeter Brune   Not Collective
56769e764e56SPeter Brune 
56779e764e56SPeter Brune   Input Parameter:
5678f6dfbefdSBarry Smith . snes - iterative context obtained from `SNESCreate()`
56799e764e56SPeter Brune 
56809e764e56SPeter Brune   Output Parameter:
56819e764e56SPeter Brune . linesearch - linesearch context
56829e764e56SPeter Brune 
5683162e0bf5SPeter Brune   Level: beginner
56849e764e56SPeter Brune 
56851cc06b55SBarry Smith .seealso: [](ch_snes), `SNESLineSearch`, `SNESSetLineSearch()`, `SNESLineSearchCreate()`
56869e764e56SPeter Brune @*/
5687d71ae5a4SJacob Faibussowitsch PetscErrorCode SNESGetLineSearch(SNES snes, SNESLineSearch *linesearch)
5688d71ae5a4SJacob Faibussowitsch {
56899e764e56SPeter Brune   const char *optionsprefix;
56909e764e56SPeter Brune 
56919e764e56SPeter Brune   PetscFunctionBegin;
56929e764e56SPeter Brune   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
56939e764e56SPeter Brune   PetscValidPointer(linesearch, 2);
56949e764e56SPeter Brune   if (!snes->linesearch) {
56959566063dSJacob Faibussowitsch     PetscCall(SNESGetOptionsPrefix(snes, &optionsprefix));
56969566063dSJacob Faibussowitsch     PetscCall(SNESLineSearchCreate(PetscObjectComm((PetscObject)snes), &snes->linesearch));
56979566063dSJacob Faibussowitsch     PetscCall(SNESLineSearchSetSNES(snes->linesearch, snes));
56989566063dSJacob Faibussowitsch     PetscCall(SNESLineSearchAppendOptionsPrefix(snes->linesearch, optionsprefix));
56999566063dSJacob Faibussowitsch     PetscCall(PetscObjectIncrementTabLevel((PetscObject)snes->linesearch, (PetscObject)snes, 1));
57009e764e56SPeter Brune   }
57019e764e56SPeter Brune   *linesearch = snes->linesearch;
57023ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
57039e764e56SPeter Brune }
5704