xref: /petsc/src/snes/interface/snes.c (revision fbf9dbe564678ed6eff1806adbc4c4f01b9743f4)
1 #include <petsc/private/snesimpl.h> /*I "petscsnes.h"  I*/
2 #include <petscdmshell.h>
3 #include <petscdraw.h>
4 #include <petscds.h>
5 #include <petscdmadaptor.h>
6 #include <petscconvest.h>
7 
8 PetscBool         SNESRegisterAllCalled = PETSC_FALSE;
9 PetscFunctionList SNESList              = NULL;
10 
11 /* Logging support */
12 PetscClassId  SNES_CLASSID, DMSNES_CLASSID;
13 PetscLogEvent SNES_Solve, SNES_SetUp, SNES_FunctionEval, SNES_JacobianEval, SNES_NGSEval, SNES_NGSFuncEval, SNES_NPCSolve, SNES_ObjectiveEval;
14 
15 /*@
16    SNESSetErrorIfNotConverged - Causes `SNESSolve()` to generate an error immediately if the solver has not converged.
17 
18    Logically Collective
19 
20    Input Parameters:
21 +  snes - iterative context obtained from `SNESCreate()`
22 -  flg - `PETSC_TRUE` indicates you want the error generated
23 
24    Options Database Key:
25 .  -snes_error_if_not_converged <true,false> - cause an immediate error condition and stop the program if the solver does not converge
26 
27    Level: intermediate
28 
29    Note:
30    Normally PETSc continues if a solver fails to converge, you can call `SNESGetConvergedReason()` after a `SNESSolve()`
31    to determine if it has converged. Otherwise the solution may be inaccurate or wrong
32 
33 .seealso: [](ch_snes), `SNES`, `SNESGetErrorIfNotConverged()`, `KSPGetErrorIfNotConverged()`, `KSPSetErrorIfNotConverged()`
34 @*/
35 PetscErrorCode SNESSetErrorIfNotConverged(SNES snes, PetscBool flg)
36 {
37   PetscFunctionBegin;
38   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
39   PetscValidLogicalCollectiveBool(snes, flg, 2);
40   snes->errorifnotconverged = flg;
41   PetscFunctionReturn(PETSC_SUCCESS);
42 }
43 
44 /*@
45    SNESGetErrorIfNotConverged - Indicates if `SNESSolve()` will generate an error if the solver does not converge?
46 
47    Not Collective
48 
49    Input Parameter:
50 .  snes - iterative context obtained from `SNESCreate()`
51 
52    Output Parameter:
53 .  flag - `PETSC_TRUE` if it will generate an error, else `PETSC_FALSE`
54 
55    Level: intermediate
56 
57 .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetErrorIfNotConverged()`, `KSPGetErrorIfNotConverged()`, `KSPSetErrorIfNotConverged()`
58 @*/
59 PetscErrorCode SNESGetErrorIfNotConverged(SNES snes, PetscBool *flag)
60 {
61   PetscFunctionBegin;
62   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
63   PetscValidBoolPointer(flag, 2);
64   *flag = snes->errorifnotconverged;
65   PetscFunctionReturn(PETSC_SUCCESS);
66 }
67 
68 /*@
69     SNESSetAlwaysComputesFinalResidual - tells the `SNES` to always compute the residual (nonlinear function value) at the final solution
70 
71    Logically Collective
72 
73     Input Parameters:
74 +   snes - the shell `SNES`
75 -   flg - `PETSC_TRUE` to always compute the residual
76 
77    Level: advanced
78 
79    Note:
80    Some solvers (such as smoothers in a `SNESFAS`) do not need the residual computed at the final solution so skip computing it
81    to save time.
82 
83 .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESGetAlwaysComputesFinalResidual()`
84 @*/
85 PetscErrorCode SNESSetAlwaysComputesFinalResidual(SNES snes, PetscBool flg)
86 {
87   PetscFunctionBegin;
88   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
89   snes->alwayscomputesfinalresidual = flg;
90   PetscFunctionReturn(PETSC_SUCCESS);
91 }
92 
93 /*@
94     SNESGetAlwaysComputesFinalResidual - checks if the `SNES` always computes the residual at the final solution
95 
96    Logically Collective
97 
98     Input Parameter:
99 .   snes - the `SNES` context
100 
101     Output Parameter:
102 .   flg - `PETSC_TRUE` if the residual is computed
103 
104    Level: advanced
105 
106 .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetAlwaysComputesFinalResidual()`
107 @*/
108 PetscErrorCode SNESGetAlwaysComputesFinalResidual(SNES snes, PetscBool *flg)
109 {
110   PetscFunctionBegin;
111   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
112   *flg = snes->alwayscomputesfinalresidual;
113   PetscFunctionReturn(PETSC_SUCCESS);
114 }
115 
116 /*@
117    SNESSetFunctionDomainError - tells `SNES` that the input vector, a proposed new solution, to your function you provided to `SNESSetFunction()` is not
118      in the functions domain. For example, a step with negative pressure.
119 
120    Logically Collective
121 
122    Input Parameter:
123 .  snes - the `SNES` context
124 
125    Level: advanced
126 
127    Note:
128    You can direct `SNES` to avoid certain steps by using `SNESVISetVariableBounds()`, `SNESVISetComputeVariableBounds()` or
129    `SNESLineSearchSetPreCheck()`, `SNESLineSearchSetPostCheck()`
130 
131 .seealso: [](ch_snes), `SNESCreate()`, `SNESSetFunction()`, `SNESFunction`, `SNESSetJacobianDomainError()`, `SNESVISetVariableBounds()`,
132           `SNESVISetComputeVariableBounds()`, `SNESLineSearchSetPreCheck()`, `SNESLineSearchSetPostCheck()`
133 @*/
134 PetscErrorCode SNESSetFunctionDomainError(SNES snes)
135 {
136   PetscFunctionBegin;
137   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
138   PetscCheck(!snes->errorifnotconverged, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "User code indicates input vector is not in the function domain");
139   snes->domainerror = PETSC_TRUE;
140   PetscFunctionReturn(PETSC_SUCCESS);
141 }
142 
143 /*@
144    SNESSetJacobianDomainError - tells `SNES` that the function you provided to `SNESSetJacobian()` at the proposed step. For example there is a negative element transformation.
145 
146    Logically Collective
147 
148    Input Parameter:
149 .  snes - the `SNES` context
150 
151    Level: advanced
152 
153    Note:
154    You can direct `SNES` to avoid certain steps by using `SNESVISetVariableBounds()`, `SNESVISetComputeVariableBounds()` or
155    `SNESLineSearchSetPreCheck()`, `SNESLineSearchSetPostCheck()`
156 
157 .seealso: [](ch_snes), `SNESCreate()`, `SNESSetFunction()`, `SNESFunction()`, `SNESSetFunctionDomainError()`, `SNESVISetVariableBounds()`,
158           `SNESVISetComputeVariableBounds()`, `SNESLineSearchSetPreCheck()`, `SNESLineSearchSetPostCheck()`
159 @*/
160 PetscErrorCode SNESSetJacobianDomainError(SNES snes)
161 {
162   PetscFunctionBegin;
163   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
164   PetscCheck(!snes->errorifnotconverged, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "User code indicates computeJacobian does not make sense");
165   snes->jacobiandomainerror = PETSC_TRUE;
166   PetscFunctionReturn(PETSC_SUCCESS);
167 }
168 
169 /*@
170    SNESSetCheckJacobianDomainError - tells `SNESSolve()` whether to check if the user called `SNESSetJacobianDomainError()` Jacobian domain error after
171    each Jacobian evaluation. By default, we check Jacobian domain error in the debug mode, and do not check it in the optimized mode.
172 
173    Logically Collective
174 
175    Input Parameters:
176 +  snes - the `SNES` context
177 -  flg  - indicates if or not to check Jacobian domain error after each Jacobian evaluation
178 
179    Level: advanced
180 
181    Note:
182    Checks require one extra parallel synchronization for each Jacobian evaluation
183 
184 .seealso: [](ch_snes), `SNES`, `SNESConvergedReason`, `SNESCreate()`, `SNESSetFunction()`, `SNESFunction()`, `SNESSetFunctionDomainError()`, `SNESGetCheckJacobianDomainError()`
185 @*/
186 PetscErrorCode SNESSetCheckJacobianDomainError(SNES snes, PetscBool flg)
187 {
188   PetscFunctionBegin;
189   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
190   snes->checkjacdomainerror = flg;
191   PetscFunctionReturn(PETSC_SUCCESS);
192 }
193 
194 /*@
195    SNESGetCheckJacobianDomainError - Get an indicator whether or not we are checking Jacobian domain errors after each Jacobian evaluation.
196 
197    Logically Collective
198 
199    Input Parameter:
200 .  snes - the `SNES` context
201 
202    Output Parameter:
203 .  flg  - `PETSC_FALSE` indicates that we don't check Jacobian domain errors after each Jacobian evaluation
204 
205    Level: advanced
206 
207 .seealso: [](ch_snes), `SNES`, `SNESCreate()`, `SNESSetFunction()`, `SNESFunction()`, `SNESSetFunctionDomainError()`, `SNESSetCheckJacobianDomainError()`
208 @*/
209 PetscErrorCode SNESGetCheckJacobianDomainError(SNES snes, PetscBool *flg)
210 {
211   PetscFunctionBegin;
212   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
213   PetscValidBoolPointer(flg, 2);
214   *flg = snes->checkjacdomainerror;
215   PetscFunctionReturn(PETSC_SUCCESS);
216 }
217 
218 /*@
219    SNESGetFunctionDomainError - Gets the status of the domain error after a call to `SNESComputeFunction()`;
220 
221    Logically Collective
222 
223    Input Parameter:
224 .  snes - the `SNES` context
225 
226    Output Parameter:
227 .  domainerror - Set to `PETSC_TRUE` if there's a domain error; `PETSC_FALSE` otherwise.
228 
229    Level: developer
230 
231 .seealso: [](ch_snes), `SNES`, `SNESSetFunctionDomainError()`, `SNESComputeFunction()`
232 @*/
233 PetscErrorCode SNESGetFunctionDomainError(SNES snes, PetscBool *domainerror)
234 {
235   PetscFunctionBegin;
236   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
237   PetscValidBoolPointer(domainerror, 2);
238   *domainerror = snes->domainerror;
239   PetscFunctionReturn(PETSC_SUCCESS);
240 }
241 
242 /*@
243    SNESGetJacobianDomainError - Gets the status of the Jacobian domain error after a call to `SNESComputeJacobian()`;
244 
245    Logically Collective
246 
247    Input Parameter:
248 .  snes - the `SNES` context
249 
250    Output Parameter:
251 .  domainerror - Set to `PETSC_TRUE` if there's a Jacobian domain error; `PETSC_FALSE` otherwise.
252 
253    Level: advanced
254 
255 .seealso: [](ch_snes), `SNES`, `SNESSetFunctionDomainError()`, `SNESComputeFunction()`, `SNESGetFunctionDomainError()`
256 @*/
257 PetscErrorCode SNESGetJacobianDomainError(SNES snes, PetscBool *domainerror)
258 {
259   PetscFunctionBegin;
260   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
261   PetscValidBoolPointer(domainerror, 2);
262   *domainerror = snes->jacobiandomainerror;
263   PetscFunctionReturn(PETSC_SUCCESS);
264 }
265 
266 /*@C
267   SNESLoad - Loads a `SNES` that has been stored in `PETSCVIEWERBINARY` with `SNESView()`.
268 
269   Collective
270 
271   Input Parameters:
272 + newdm - the newly loaded `SNES`, this needs to have been created with `SNESCreate()` or
273            some related function before a call to `SNESLoad()`.
274 - viewer - binary file viewer, obtained from `PetscViewerBinaryOpen()`
275 
276    Level: intermediate
277 
278   Note:
279    The type is determined by the data in the file, any type set into the `SNES` before this call is ignored.
280 
281 .seealso: [](ch_snes), `SNES`, `PetscViewer`, `SNESCreate()`, `SNESType`, `PetscViewerBinaryOpen()`, `SNESView()`, `MatLoad()`, `VecLoad()`
282 @*/
283 PetscErrorCode SNESLoad(SNES snes, PetscViewer viewer)
284 {
285   PetscBool isbinary;
286   PetscInt  classid;
287   char      type[256];
288   KSP       ksp;
289   DM        dm;
290   DMSNES    dmsnes;
291 
292   PetscFunctionBegin;
293   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
294   PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2);
295   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary));
296   PetscCheck(isbinary, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Invalid viewer; open viewer with PetscViewerBinaryOpen()");
297 
298   PetscCall(PetscViewerBinaryRead(viewer, &classid, 1, NULL, PETSC_INT));
299   PetscCheck(classid == SNES_FILE_CLASSID, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_WRONG, "Not SNES next in file");
300   PetscCall(PetscViewerBinaryRead(viewer, type, 256, NULL, PETSC_CHAR));
301   PetscCall(SNESSetType(snes, type));
302   PetscTryTypeMethod(snes, load, viewer);
303   PetscCall(SNESGetDM(snes, &dm));
304   PetscCall(DMGetDMSNES(dm, &dmsnes));
305   PetscCall(DMSNESLoad(dmsnes, viewer));
306   PetscCall(SNESGetKSP(snes, &ksp));
307   PetscCall(KSPLoad(ksp, viewer));
308   PetscFunctionReturn(PETSC_SUCCESS);
309 }
310 
311 #include <petscdraw.h>
312 #if defined(PETSC_HAVE_SAWS)
313   #include <petscviewersaws.h>
314 #endif
315 
316 /*@C
317    SNESViewFromOptions - View a `SNES` based on values in the options database
318 
319    Collective
320 
321    Input Parameters:
322 +  A - the `SNES` context
323 .  obj - Optional object that provides the options prefix for the checks
324 -  name - command line option
325 
326    Level: intermediate
327 
328 .seealso: [](ch_snes), `SNES`, `SNESView`, `PetscObjectViewFromOptions()`, `SNESCreate()`
329 @*/
330 PetscErrorCode SNESViewFromOptions(SNES A, PetscObject obj, const char name[])
331 {
332   PetscFunctionBegin;
333   PetscValidHeaderSpecific(A, SNES_CLASSID, 1);
334   PetscCall(PetscObjectViewFromOptions((PetscObject)A, obj, name));
335   PetscFunctionReturn(PETSC_SUCCESS);
336 }
337 
338 PETSC_EXTERN PetscErrorCode SNESComputeJacobian_DMDA(SNES, Vec, Mat, Mat, void *);
339 
340 /*@C
341    SNESView - Prints or visualizes the `SNES` data structure.
342 
343    Collective
344 
345    Input Parameters:
346 +  snes - the `SNES` context
347 -  viewer - the `PetscViewer`
348 
349    Options Database Key:
350 .  -snes_view - Calls `SNESView()` at end of `SNESSolve()`
351 
352    Level: beginner
353 
354    Notes:
355    The available visualization contexts include
356 +     `PETSC_VIEWER_STDOUT_SELF` - standard output (default)
357 -     `PETSC_VIEWER_STDOUT_WORLD` - synchronized standard
358          output where only the first processor opens
359          the file.  All other processors send their
360          data to the first processor to print.
361 
362    The available formats include
363 +     `PETSC_VIEWER_DEFAULT` - standard output (default)
364 -     `PETSC_VIEWER_ASCII_INFO_DETAIL` - more verbose output for `SNESNASM`
365 
366    The user can open an alternative visualization context with
367    `PetscViewerASCIIOpen()` - output to a specified file.
368 
369   In the debugger you can do "call `SNESView`(snes,0)" to display the `SNES` solver. (The same holds for any PETSc object viewer).
370 
371 .seealso: [](ch_snes), `SNES`, `SNESLoad()`, `SNESCreate()`, `PetscViewerASCIIOpen()`
372 @*/
373 PetscErrorCode SNESView(SNES snes, PetscViewer viewer)
374 {
375   SNESKSPEW     *kctx;
376   KSP            ksp;
377   SNESLineSearch linesearch;
378   PetscBool      iascii, isstring, isbinary, isdraw;
379   DMSNES         dmsnes;
380 #if defined(PETSC_HAVE_SAWS)
381   PetscBool issaws;
382 #endif
383 
384   PetscFunctionBegin;
385   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
386   if (!viewer) PetscCall(PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)snes), &viewer));
387   PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2);
388   PetscCheckSameComm(snes, 1, viewer, 2);
389 
390   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii));
391   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSTRING, &isstring));
392   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary));
393   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw));
394 #if defined(PETSC_HAVE_SAWS)
395   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSAWS, &issaws));
396 #endif
397   if (iascii) {
398     SNESNormSchedule normschedule;
399     DM               dm;
400     PetscErrorCode (*cJ)(SNES, Vec, Mat, Mat, void *);
401     void       *ctx;
402     const char *pre = "";
403 
404     PetscCall(PetscObjectPrintClassNamePrefixType((PetscObject)snes, viewer));
405     if (!snes->setupcalled) PetscCall(PetscViewerASCIIPrintf(viewer, "  SNES has not been set up so information may be incomplete\n"));
406     if (snes->ops->view) {
407       PetscCall(PetscViewerASCIIPushTab(viewer));
408       PetscUseTypeMethod(snes, view, viewer);
409       PetscCall(PetscViewerASCIIPopTab(viewer));
410     }
411     PetscCall(PetscViewerASCIIPrintf(viewer, "  maximum iterations=%" PetscInt_FMT ", maximum function evaluations=%" PetscInt_FMT "\n", snes->max_its, snes->max_funcs));
412     PetscCall(PetscViewerASCIIPrintf(viewer, "  tolerances: relative=%g, absolute=%g, solution=%g\n", (double)snes->rtol, (double)snes->abstol, (double)snes->stol));
413     if (snes->usesksp) PetscCall(PetscViewerASCIIPrintf(viewer, "  total number of linear solver iterations=%" PetscInt_FMT "\n", snes->linear_its));
414     PetscCall(PetscViewerASCIIPrintf(viewer, "  total number of function evaluations=%" PetscInt_FMT "\n", snes->nfuncs));
415     PetscCall(SNESGetNormSchedule(snes, &normschedule));
416     if (normschedule > 0) PetscCall(PetscViewerASCIIPrintf(viewer, "  norm schedule %s\n", SNESNormSchedules[normschedule]));
417     if (snes->gridsequence) PetscCall(PetscViewerASCIIPrintf(viewer, "  total number of grid sequence refinements=%" PetscInt_FMT "\n", snes->gridsequence));
418     if (snes->ksp_ewconv) {
419       kctx = (SNESKSPEW *)snes->kspconvctx;
420       if (kctx) {
421         PetscCall(PetscViewerASCIIPrintf(viewer, "  Eisenstat-Walker computation of KSP relative tolerance (version %" PetscInt_FMT ")\n", kctx->version));
422         PetscCall(PetscViewerASCIIPrintf(viewer, "    rtol_0=%g, rtol_max=%g, threshold=%g\n", (double)kctx->rtol_0, (double)kctx->rtol_max, (double)kctx->threshold));
423         PetscCall(PetscViewerASCIIPrintf(viewer, "    gamma=%g, alpha=%g, alpha2=%g\n", (double)kctx->gamma, (double)kctx->alpha, (double)kctx->alpha2));
424       }
425     }
426     if (snes->lagpreconditioner == -1) {
427       PetscCall(PetscViewerASCIIPrintf(viewer, "  Preconditioned is never rebuilt\n"));
428     } else if (snes->lagpreconditioner > 1) {
429       PetscCall(PetscViewerASCIIPrintf(viewer, "  Preconditioned is rebuilt every %" PetscInt_FMT " new Jacobians\n", snes->lagpreconditioner));
430     }
431     if (snes->lagjacobian == -1) {
432       PetscCall(PetscViewerASCIIPrintf(viewer, "  Jacobian is never rebuilt\n"));
433     } else if (snes->lagjacobian > 1) {
434       PetscCall(PetscViewerASCIIPrintf(viewer, "  Jacobian is rebuilt every %" PetscInt_FMT " SNES iterations\n", snes->lagjacobian));
435     }
436     PetscCall(SNESGetDM(snes, &dm));
437     PetscCall(DMSNESGetJacobian(dm, &cJ, &ctx));
438     if (snes->mf_operator) {
439       PetscCall(PetscViewerASCIIPrintf(viewer, "  Jacobian is applied matrix-free with differencing\n"));
440       pre = "Preconditioning ";
441     }
442     if (cJ == SNESComputeJacobianDefault) {
443       PetscCall(PetscViewerASCIIPrintf(viewer, "  %sJacobian is built using finite differences one column at a time\n", pre));
444     } else if (cJ == SNESComputeJacobianDefaultColor) {
445       PetscCall(PetscViewerASCIIPrintf(viewer, "  %sJacobian is built using finite differences with coloring\n", pre));
446       /* it slightly breaks data encapsulation for access the DMDA information directly */
447     } else if (cJ == SNESComputeJacobian_DMDA) {
448       MatFDColoring fdcoloring;
449       PetscCall(PetscObjectQuery((PetscObject)dm, "DMDASNES_FDCOLORING", (PetscObject *)&fdcoloring));
450       if (fdcoloring) {
451         PetscCall(PetscViewerASCIIPrintf(viewer, "  %sJacobian is built using colored finite differences on a DMDA\n", pre));
452       } else {
453         PetscCall(PetscViewerASCIIPrintf(viewer, "  %sJacobian is built using a DMDA local Jacobian\n", pre));
454       }
455     } else if (snes->mf && !snes->mf_operator) {
456       PetscCall(PetscViewerASCIIPrintf(viewer, "  Jacobian is applied matrix-free with differencing, no explicit Jacobian\n"));
457     }
458   } else if (isstring) {
459     const char *type;
460     PetscCall(SNESGetType(snes, &type));
461     PetscCall(PetscViewerStringSPrintf(viewer, " SNESType: %-7.7s", type));
462     PetscTryTypeMethod(snes, view, viewer);
463   } else if (isbinary) {
464     PetscInt    classid = SNES_FILE_CLASSID;
465     MPI_Comm    comm;
466     PetscMPIInt rank;
467     char        type[256];
468 
469     PetscCall(PetscObjectGetComm((PetscObject)snes, &comm));
470     PetscCallMPI(MPI_Comm_rank(comm, &rank));
471     if (rank == 0) {
472       PetscCall(PetscViewerBinaryWrite(viewer, &classid, 1, PETSC_INT));
473       PetscCall(PetscStrncpy(type, ((PetscObject)snes)->type_name, sizeof(type)));
474       PetscCall(PetscViewerBinaryWrite(viewer, type, sizeof(type), PETSC_CHAR));
475     }
476     PetscTryTypeMethod(snes, view, viewer);
477   } else if (isdraw) {
478     PetscDraw draw;
479     char      str[36];
480     PetscReal x, y, bottom, h;
481 
482     PetscCall(PetscViewerDrawGetDraw(viewer, 0, &draw));
483     PetscCall(PetscDrawGetCurrentPoint(draw, &x, &y));
484     PetscCall(PetscStrncpy(str, "SNES: ", sizeof(str)));
485     PetscCall(PetscStrlcat(str, ((PetscObject)snes)->type_name, sizeof(str)));
486     PetscCall(PetscDrawStringBoxed(draw, x, y, PETSC_DRAW_BLUE, PETSC_DRAW_BLACK, str, NULL, &h));
487     bottom = y - h;
488     PetscCall(PetscDrawPushCurrentPoint(draw, x, bottom));
489     PetscTryTypeMethod(snes, view, viewer);
490 #if defined(PETSC_HAVE_SAWS)
491   } else if (issaws) {
492     PetscMPIInt rank;
493     const char *name;
494 
495     PetscCall(PetscObjectGetName((PetscObject)snes, &name));
496     PetscCallMPI(MPI_Comm_rank(PETSC_COMM_WORLD, &rank));
497     if (!((PetscObject)snes)->amsmem && rank == 0) {
498       char dir[1024];
499 
500       PetscCall(PetscObjectViewSAWs((PetscObject)snes, viewer));
501       PetscCall(PetscSNPrintf(dir, 1024, "/PETSc/Objects/%s/its", name));
502       PetscCallSAWs(SAWs_Register, (dir, &snes->iter, 1, SAWs_READ, SAWs_INT));
503       if (!snes->conv_hist) PetscCall(SNESSetConvergenceHistory(snes, NULL, NULL, PETSC_DECIDE, PETSC_TRUE));
504       PetscCall(PetscSNPrintf(dir, 1024, "/PETSc/Objects/%s/conv_hist", name));
505       PetscCallSAWs(SAWs_Register, (dir, snes->conv_hist, 10, SAWs_READ, SAWs_DOUBLE));
506     }
507 #endif
508   }
509   if (snes->linesearch) {
510     PetscCall(SNESGetLineSearch(snes, &linesearch));
511     PetscCall(PetscViewerASCIIPushTab(viewer));
512     PetscCall(SNESLineSearchView(linesearch, viewer));
513     PetscCall(PetscViewerASCIIPopTab(viewer));
514   }
515   if (snes->npc && snes->usesnpc) {
516     PetscCall(PetscViewerASCIIPushTab(viewer));
517     PetscCall(SNESView(snes->npc, viewer));
518     PetscCall(PetscViewerASCIIPopTab(viewer));
519   }
520   PetscCall(PetscViewerASCIIPushTab(viewer));
521   PetscCall(DMGetDMSNES(snes->dm, &dmsnes));
522   PetscCall(DMSNESView(dmsnes, viewer));
523   PetscCall(PetscViewerASCIIPopTab(viewer));
524   if (snes->usesksp) {
525     PetscCall(SNESGetKSP(snes, &ksp));
526     PetscCall(PetscViewerASCIIPushTab(viewer));
527     PetscCall(KSPView(ksp, viewer));
528     PetscCall(PetscViewerASCIIPopTab(viewer));
529   }
530   if (isdraw) {
531     PetscDraw draw;
532     PetscCall(PetscViewerDrawGetDraw(viewer, 0, &draw));
533     PetscCall(PetscDrawPopCurrentPoint(draw));
534   }
535   PetscFunctionReturn(PETSC_SUCCESS);
536 }
537 
538 /*
539   We retain a list of functions that also take SNES command
540   line options. These are called at the end SNESSetFromOptions()
541 */
542 #define MAXSETFROMOPTIONS 5
543 static PetscInt numberofsetfromoptions;
544 static PetscErrorCode (*othersetfromoptions[MAXSETFROMOPTIONS])(SNES);
545 
546 /*@C
547   SNESAddOptionsChecker - Adds an additional function to check for `SNES` options.
548 
549   Not Collective
550 
551   Input Parameter:
552 . snescheck - function that checks for options
553 
554   Level: developer
555 
556 .seealso: [](ch_snes), `SNES`, `SNESSetFromOptions()`
557 @*/
558 PetscErrorCode SNESAddOptionsChecker(PetscErrorCode (*snescheck)(SNES))
559 {
560   PetscFunctionBegin;
561   PetscCheck(numberofsetfromoptions < MAXSETFROMOPTIONS, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Too many options checkers, only %d allowed", MAXSETFROMOPTIONS);
562   othersetfromoptions[numberofsetfromoptions++] = snescheck;
563   PetscFunctionReturn(PETSC_SUCCESS);
564 }
565 
566 static PetscErrorCode SNESSetUpMatrixFree_Private(SNES snes, PetscBool hasOperator, PetscInt version)
567 {
568   Mat          J;
569   MatNullSpace nullsp;
570 
571   PetscFunctionBegin;
572   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
573 
574   if (!snes->vec_func && (snes->jacobian || snes->jacobian_pre)) {
575     Mat A = snes->jacobian, B = snes->jacobian_pre;
576     PetscCall(MatCreateVecs(A ? A : B, NULL, &snes->vec_func));
577   }
578 
579   PetscCheck(version == 1 || version == 2, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "matrix-free operator routines, only version 1 and 2");
580   if (version == 1) {
581     PetscCall(MatCreateSNESMF(snes, &J));
582     PetscCall(MatMFFDSetOptionsPrefix(J, ((PetscObject)snes)->prefix));
583     PetscCall(MatSetFromOptions(J));
584     /* TODO: the version 2 code should be merged into the MatCreateSNESMF() and MatCreateMFFD() infrastructure and then removed */
585   } else /* if (version == 2) */ {
586     PetscCheck(snes->vec_func, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "SNESSetFunction() must be called first");
587 #if !defined(PETSC_USE_COMPLEX) && !defined(PETSC_USE_REAL_SINGLE) && !defined(PETSC_USE_REAL___FLOAT128) && !defined(PETSC_USE_REAL___FP16)
588     PetscCall(MatCreateSNESMFMore(snes, snes->vec_func, &J));
589 #else
590     SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "matrix-free operator routines (version 2)");
591 #endif
592   }
593 
594   /* attach any user provided null space that was on Amat to the newly created matrix free matrix */
595   if (snes->jacobian) {
596     PetscCall(MatGetNullSpace(snes->jacobian, &nullsp));
597     if (nullsp) PetscCall(MatSetNullSpace(J, nullsp));
598   }
599 
600   PetscCall(PetscInfo(snes, "Setting default matrix-free operator routines (version %" PetscInt_FMT ")\n", version));
601   if (hasOperator) {
602     /* This version replaces the user provided Jacobian matrix with a
603        matrix-free version but still employs the user-provided preconditioner matrix. */
604     PetscCall(SNESSetJacobian(snes, J, NULL, NULL, NULL));
605   } else {
606     /* This version replaces both the user-provided Jacobian and the user-
607      provided preconditioner Jacobian with the default matrix free version. */
608     if (snes->npcside == PC_LEFT && snes->npc) {
609       if (!snes->jacobian) PetscCall(SNESSetJacobian(snes, J, NULL, NULL, NULL));
610     } else {
611       KSP       ksp;
612       PC        pc;
613       PetscBool match;
614 
615       PetscCall(SNESSetJacobian(snes, J, J, MatMFFDComputeJacobian, NULL));
616       /* Force no preconditioner */
617       PetscCall(SNESGetKSP(snes, &ksp));
618       PetscCall(KSPGetPC(ksp, &pc));
619       PetscCall(PetscObjectTypeCompareAny((PetscObject)pc, &match, PCSHELL, PCH2OPUS, ""));
620       if (!match) {
621         PetscCall(PetscInfo(snes, "Setting default matrix-free preconditioner routines\nThat is no preconditioner is being used\n"));
622         PetscCall(PCSetType(pc, PCNONE));
623       }
624     }
625   }
626   PetscCall(MatDestroy(&J));
627   PetscFunctionReturn(PETSC_SUCCESS);
628 }
629 
630 static PetscErrorCode DMRestrictHook_SNESVecSol(DM dmfine, Mat Restrict, Vec Rscale, Mat Inject, DM dmcoarse, void *ctx)
631 {
632   SNES snes = (SNES)ctx;
633   Vec  Xfine, Xfine_named = NULL, Xcoarse;
634 
635   PetscFunctionBegin;
636   if (PetscLogPrintInfo) {
637     PetscInt finelevel, coarselevel, fineclevel, coarseclevel;
638     PetscCall(DMGetRefineLevel(dmfine, &finelevel));
639     PetscCall(DMGetCoarsenLevel(dmfine, &fineclevel));
640     PetscCall(DMGetRefineLevel(dmcoarse, &coarselevel));
641     PetscCall(DMGetCoarsenLevel(dmcoarse, &coarseclevel));
642     PetscCall(PetscInfo(dmfine, "Restricting SNES solution vector from level %" PetscInt_FMT "-%" PetscInt_FMT " to level %" PetscInt_FMT "-%" PetscInt_FMT "\n", finelevel, fineclevel, coarselevel, coarseclevel));
643   }
644   if (dmfine == snes->dm) Xfine = snes->vec_sol;
645   else {
646     PetscCall(DMGetNamedGlobalVector(dmfine, "SNESVecSol", &Xfine_named));
647     Xfine = Xfine_named;
648   }
649   PetscCall(DMGetNamedGlobalVector(dmcoarse, "SNESVecSol", &Xcoarse));
650   if (Inject) {
651     PetscCall(MatRestrict(Inject, Xfine, Xcoarse));
652   } else {
653     PetscCall(MatRestrict(Restrict, Xfine, Xcoarse));
654     PetscCall(VecPointwiseMult(Xcoarse, Xcoarse, Rscale));
655   }
656   PetscCall(DMRestoreNamedGlobalVector(dmcoarse, "SNESVecSol", &Xcoarse));
657   if (Xfine_named) PetscCall(DMRestoreNamedGlobalVector(dmfine, "SNESVecSol", &Xfine_named));
658   PetscFunctionReturn(PETSC_SUCCESS);
659 }
660 
661 static PetscErrorCode DMCoarsenHook_SNESVecSol(DM dm, DM dmc, void *ctx)
662 {
663   PetscFunctionBegin;
664   PetscCall(DMCoarsenHookAdd(dmc, DMCoarsenHook_SNESVecSol, DMRestrictHook_SNESVecSol, ctx));
665   PetscFunctionReturn(PETSC_SUCCESS);
666 }
667 
668 /* This may be called to rediscretize the operator on levels of linear multigrid. The DM shuffle is so the user can
669  * safely call SNESGetDM() in their residual evaluation routine. */
670 static PetscErrorCode KSPComputeOperators_SNES(KSP ksp, Mat A, Mat B, void *ctx)
671 {
672   SNES  snes = (SNES)ctx;
673   Vec   X, Xnamed = NULL;
674   DM    dmsave;
675   void *ctxsave;
676   PetscErrorCode (*jac)(SNES, Vec, Mat, Mat, void *) = NULL;
677 
678   PetscFunctionBegin;
679   dmsave = snes->dm;
680   PetscCall(KSPGetDM(ksp, &snes->dm));
681   if (dmsave == snes->dm) X = snes->vec_sol; /* We are on the finest level */
682   else { /* We are on a coarser level, this vec was initialized using a DM restrict hook */ PetscCall(DMGetNamedGlobalVector(snes->dm, "SNESVecSol", &Xnamed));
683     X = Xnamed;
684     PetscCall(SNESGetJacobian(snes, NULL, NULL, &jac, &ctxsave));
685     /* If the DM's don't match up, the MatFDColoring context needed for the jacobian won't match up either -- fixit. */
686     if (jac == SNESComputeJacobianDefaultColor) PetscCall(SNESSetJacobian(snes, NULL, NULL, SNESComputeJacobianDefaultColor, NULL));
687   }
688   /* Make sure KSP DM has the Jacobian computation routine */
689   {
690     DMSNES sdm;
691 
692     PetscCall(DMGetDMSNES(snes->dm, &sdm));
693     if (!sdm->ops->computejacobian) PetscCall(DMCopyDMSNES(dmsave, snes->dm));
694   }
695   /* Compute the operators */
696   PetscCall(SNESComputeJacobian(snes, X, A, B));
697   /* Put the previous context back */
698   if (snes->dm != dmsave && jac == SNESComputeJacobianDefaultColor) PetscCall(SNESSetJacobian(snes, NULL, NULL, jac, ctxsave));
699 
700   if (Xnamed) PetscCall(DMRestoreNamedGlobalVector(snes->dm, "SNESVecSol", &Xnamed));
701   snes->dm = dmsave;
702   PetscFunctionReturn(PETSC_SUCCESS);
703 }
704 
705 /*@
706    SNESSetUpMatrices - ensures that matrices are available for `SNES` Newton-like methods, this is called by `SNESSetUp_XXX()`
707 
708    Collective
709 
710    Input Parameter:
711 .  snes - `SNES` object to configure
712 
713    Level: developer
714 
715    Note:
716    If the matrices do not yet exist it attempts to create them based on options previously set for the `SNES` such as `-snes_mf`
717 
718 .seealso: [](ch_snes), `SNES`, `SNESSetUp()`
719 @*/
720 PetscErrorCode SNESSetUpMatrices(SNES snes)
721 {
722   DM     dm;
723   DMSNES sdm;
724 
725   PetscFunctionBegin;
726   PetscCall(SNESGetDM(snes, &dm));
727   PetscCall(DMGetDMSNES(dm, &sdm));
728   if (!snes->jacobian && snes->mf) {
729     Mat   J;
730     void *functx;
731     PetscCall(MatCreateSNESMF(snes, &J));
732     PetscCall(MatMFFDSetOptionsPrefix(J, ((PetscObject)snes)->prefix));
733     PetscCall(MatSetFromOptions(J));
734     PetscCall(SNESGetFunction(snes, NULL, NULL, &functx));
735     PetscCall(SNESSetJacobian(snes, J, J, NULL, NULL));
736     PetscCall(MatDestroy(&J));
737   } else if (snes->mf_operator && !snes->jacobian_pre && !snes->jacobian) {
738     Mat J, B;
739     PetscCall(MatCreateSNESMF(snes, &J));
740     PetscCall(MatMFFDSetOptionsPrefix(J, ((PetscObject)snes)->prefix));
741     PetscCall(MatSetFromOptions(J));
742     PetscCall(DMCreateMatrix(snes->dm, &B));
743     /* sdm->computejacobian was already set to reach here */
744     PetscCall(SNESSetJacobian(snes, J, B, NULL, NULL));
745     PetscCall(MatDestroy(&J));
746     PetscCall(MatDestroy(&B));
747   } else if (!snes->jacobian_pre) {
748     PetscDS   prob;
749     Mat       J, B;
750     PetscBool hasPrec = PETSC_FALSE;
751 
752     J = snes->jacobian;
753     PetscCall(DMGetDS(dm, &prob));
754     if (prob) PetscCall(PetscDSHasJacobianPreconditioner(prob, &hasPrec));
755     if (J) PetscCall(PetscObjectReference((PetscObject)J));
756     else if (hasPrec) PetscCall(DMCreateMatrix(snes->dm, &J));
757     PetscCall(DMCreateMatrix(snes->dm, &B));
758     PetscCall(SNESSetJacobian(snes, J ? J : B, B, NULL, NULL));
759     PetscCall(MatDestroy(&J));
760     PetscCall(MatDestroy(&B));
761   }
762   {
763     KSP ksp;
764     PetscCall(SNESGetKSP(snes, &ksp));
765     PetscCall(KSPSetComputeOperators(ksp, KSPComputeOperators_SNES, snes));
766     PetscCall(DMCoarsenHookAdd(snes->dm, DMCoarsenHook_SNESVecSol, DMRestrictHook_SNESVecSol, snes));
767   }
768   PetscFunctionReturn(PETSC_SUCCESS);
769 }
770 
771 static PetscErrorCode SNESMonitorPauseFinal_Internal(SNES snes)
772 {
773   PetscInt i;
774 
775   PetscFunctionBegin;
776   if (!snes->pauseFinal) PetscFunctionReturn(PETSC_SUCCESS);
777   for (i = 0; i < snes->numbermonitors; ++i) {
778     PetscViewerAndFormat *vf = (PetscViewerAndFormat *)snes->monitorcontext[i];
779     PetscDraw             draw;
780     PetscReal             lpause;
781 
782     if (!vf) continue;
783     if (vf->lg) {
784       if (!PetscCheckPointer(vf->lg, PETSC_OBJECT)) continue;
785       if (((PetscObject)vf->lg)->classid != PETSC_DRAWLG_CLASSID) continue;
786       PetscCall(PetscDrawLGGetDraw(vf->lg, &draw));
787       PetscCall(PetscDrawGetPause(draw, &lpause));
788       PetscCall(PetscDrawSetPause(draw, -1.0));
789       PetscCall(PetscDrawPause(draw));
790       PetscCall(PetscDrawSetPause(draw, lpause));
791     } else {
792       PetscBool isdraw;
793 
794       if (!PetscCheckPointer(vf->viewer, PETSC_OBJECT)) continue;
795       if (((PetscObject)vf->viewer)->classid != PETSC_VIEWER_CLASSID) continue;
796       PetscCall(PetscObjectTypeCompare((PetscObject)vf->viewer, PETSCVIEWERDRAW, &isdraw));
797       if (!isdraw) continue;
798       PetscCall(PetscViewerDrawGetDraw(vf->viewer, 0, &draw));
799       PetscCall(PetscDrawGetPause(draw, &lpause));
800       PetscCall(PetscDrawSetPause(draw, -1.0));
801       PetscCall(PetscDrawPause(draw));
802       PetscCall(PetscDrawSetPause(draw, lpause));
803     }
804   }
805   PetscFunctionReturn(PETSC_SUCCESS);
806 }
807 
808 /*@C
809    SNESMonitorSetFromOptions - Sets a monitor function and viewer appropriate for the type indicated by the user
810 
811    Collective
812 
813    Input Parameters:
814 +  snes - `SNES` object you wish to monitor
815 .  name - the monitor type one is seeking
816 .  help - message indicating what monitoring is done
817 .  manual - manual page for the monitor
818 .  monitor - the monitor function
819 -  monitorsetup - a function that is called once ONLY if the user selected this monitor that may set additional features of the `SNES` or `PetscViewer` objects
820 
821    Options Database Key:
822 .  -name - trigger the use of this monitor in `SNESSetFromOptions()`
823 
824    Level: advanced
825 
826 .seealso: [](ch_snes), `PetscOptionsGetViewer()`, `PetscOptionsGetReal()`, `PetscOptionsHasName()`, `PetscOptionsGetString()`,
827           `PetscOptionsGetIntArray()`, `PetscOptionsGetRealArray()`, `PetscOptionsBool()`
828           `PetscOptionsInt()`, `PetscOptionsString()`, `PetscOptionsReal()`, `PetscOptionsBool()`,
829           `PetscOptionsName()`, `PetscOptionsBegin()`, `PetscOptionsEnd()`, `PetscOptionsHeadBegin()`,
830           `PetscOptionsStringArray()`, `PetscOptionsRealArray()`, `PetscOptionsScalar()`,
831           `PetscOptionsBoolGroupBegin()`, `PetscOptionsBoolGroup()`, `PetscOptionsBoolGroupEnd()`,
832           `PetscOptionsFList()`, `PetscOptionsEList()`
833 @*/
834 PetscErrorCode SNESMonitorSetFromOptions(SNES snes, const char name[], const char help[], const char manual[], PetscErrorCode (*monitor)(SNES, PetscInt, PetscReal, PetscViewerAndFormat *), PetscErrorCode (*monitorsetup)(SNES, PetscViewerAndFormat *))
835 {
836   PetscViewer       viewer;
837   PetscViewerFormat format;
838   PetscBool         flg;
839 
840   PetscFunctionBegin;
841   PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, name, &viewer, &format, &flg));
842   if (flg) {
843     PetscViewerAndFormat *vf;
844     PetscCall(PetscViewerAndFormatCreate(viewer, format, &vf));
845     PetscCall(PetscObjectDereference((PetscObject)viewer));
846     if (monitorsetup) PetscCall((*monitorsetup)(snes, vf));
847     PetscCall(SNESMonitorSet(snes, (PetscErrorCode(*)(SNES, PetscInt, PetscReal, void *))monitor, vf, (PetscErrorCode(*)(void **))PetscViewerAndFormatDestroy));
848   }
849   PetscFunctionReturn(PETSC_SUCCESS);
850 }
851 
852 PetscErrorCode SNESEWSetFromOptions_Private(SNESKSPEW *kctx, PetscBool print_api, MPI_Comm comm, const char *prefix)
853 {
854   const char *api = print_api ? "SNESKSPSetParametersEW" : NULL;
855 
856   PetscFunctionBegin;
857   PetscOptionsBegin(comm, prefix, "Eisenstat and Walker type forcing options", "KSP");
858   PetscCall(PetscOptionsInt("-ksp_ew_version", "Version 1, 2 or 3", api, kctx->version, &kctx->version, NULL));
859   PetscCall(PetscOptionsReal("-ksp_ew_rtol0", "0 <= rtol0 < 1", api, kctx->rtol_0, &kctx->rtol_0, NULL));
860   kctx->rtol_max = PetscMax(kctx->rtol_0, kctx->rtol_max);
861   PetscCall(PetscOptionsReal("-ksp_ew_rtolmax", "0 <= rtolmax < 1", api, kctx->rtol_max, &kctx->rtol_max, NULL));
862   PetscCall(PetscOptionsReal("-ksp_ew_gamma", "0 <= gamma <= 1", api, kctx->gamma, &kctx->gamma, NULL));
863   PetscCall(PetscOptionsReal("-ksp_ew_alpha", "1 < alpha <= 2", api, kctx->alpha, &kctx->alpha, NULL));
864   PetscCall(PetscOptionsReal("-ksp_ew_alpha2", "alpha2", NULL, kctx->alpha2, &kctx->alpha2, NULL));
865   PetscCall(PetscOptionsReal("-ksp_ew_threshold", "0 < threshold < 1", api, kctx->threshold, &kctx->threshold, NULL));
866   PetscCall(PetscOptionsReal("-ksp_ew_v4_p1", "p1", NULL, kctx->v4_p1, &kctx->v4_p1, NULL));
867   PetscCall(PetscOptionsReal("-ksp_ew_v4_p2", "p2", NULL, kctx->v4_p2, &kctx->v4_p2, NULL));
868   PetscCall(PetscOptionsReal("-ksp_ew_v4_p3", "p3", NULL, kctx->v4_p3, &kctx->v4_p3, NULL));
869   PetscCall(PetscOptionsReal("-ksp_ew_v4_m1", "Scaling when rk-1 in [p2,p3)", NULL, kctx->v4_m1, &kctx->v4_m1, NULL));
870   PetscCall(PetscOptionsReal("-ksp_ew_v4_m2", "Scaling when rk-1 in [p3,+infty)", NULL, kctx->v4_m2, &kctx->v4_m2, NULL));
871   PetscCall(PetscOptionsReal("-ksp_ew_v4_m3", "Threshold for successive rtol (0.1 in Eq.7)", NULL, kctx->v4_m3, &kctx->v4_m3, NULL));
872   PetscCall(PetscOptionsReal("-ksp_ew_v4_m4", "Adaptation scaling (0.5 in Eq.7)", NULL, kctx->v4_m4, &kctx->v4_m4, NULL));
873   PetscOptionsEnd();
874   PetscFunctionReturn(PETSC_SUCCESS);
875 }
876 
877 /*@
878    SNESSetFromOptions - Sets various `SNES` and `KSP` parameters from user options.
879 
880    Collective
881 
882    Input Parameter:
883 .  snes - the `SNES` context
884 
885    Options Database Keys:
886 +  -snes_type <type> - newtonls, newtontr, ngmres, ncg, nrichardson, qn, vi, fas, `SNESType` for complete list
887 .  -snes_stol - convergence tolerance in terms of the norm
888                 of the change in the solution between steps
889 .  -snes_atol <abstol> - absolute tolerance of residual norm
890 .  -snes_rtol <rtol> - relative decrease in tolerance norm from initial
891 .  -snes_divergence_tolerance <divtol> - if the residual goes above divtol*rnorm0, exit with divergence
892 .  -snes_force_iteration <force> - force SNESSolve() to take at least one iteration
893 .  -snes_max_it <max_it> - maximum number of iterations
894 .  -snes_max_funcs <max_funcs> - maximum number of function evaluations
895 .  -snes_max_fail <max_fail> - maximum number of line search failures allowed before stopping, default is none
896 .  -snes_max_linear_solve_fail - number of linear solver failures before SNESSolve() stops
897 .  -snes_lag_preconditioner <lag> - how often preconditioner is rebuilt (use -1 to never rebuild)
898 .  -snes_lag_preconditioner_persists <true,false> - retains the -snes_lag_preconditioner information across multiple SNESSolve()
899 .  -snes_lag_jacobian <lag> - how often Jacobian is rebuilt (use -1 to never rebuild)
900 .  -snes_lag_jacobian_persists <true,false> - retains the -snes_lag_jacobian information across multiple SNESSolve()
901 .  -snes_tr_tol <trtol> - trust region tolerance
902 .  -snes_convergence_test - <default,skip,correct_pressure> convergence test in nonlinear solver.
903                                default `SNESConvergedDefault()`. skip `SNESConvergedSkip()` means continue iterating until max_it or some other criterion is reached, saving expense
904                                of convergence test. correct_pressure S`NESConvergedCorrectPressure()` has special handling of a pressure null space.
905 .  -snes_monitor [ascii][:filename][:viewer format] - prints residual norm at each iteration. if no filename given prints to stdout
906 .  -snes_monitor_solution [ascii binary draw][:filename][:viewer format] - plots solution at each iteration
907 .  -snes_monitor_residual [ascii binary draw][:filename][:viewer format] - plots residual (not its norm) at each iteration
908 .  -snes_monitor_solution_update [ascii binary draw][:filename][:viewer format] - plots update to solution at each iteration
909 .  -snes_monitor_lg_residualnorm - plots residual norm at each iteration
910 .  -snes_monitor_lg_range - plots residual norm at each iteration
911 .  -snes_monitor_pause_final - Pauses all monitor drawing after the solver ends
912 .  -snes_fd - use finite differences to compute Jacobian; very slow, only for testing
913 .  -snes_fd_color - use finite differences with coloring to compute Jacobian
914 .  -snes_mf_ksp_monitor - if using matrix-free multiply then print h at each KSP iteration
915 .  -snes_converged_reason - print the reason for convergence/divergence after each solve
916 .  -npc_snes_type <type> - the SNES type to use as a nonlinear preconditioner
917 .   -snes_test_jacobian <optional threshold> - compare the user provided Jacobian with one computed via finite differences to check for errors.  If a threshold is given, display only those entries whose difference is greater than the threshold.
918 -   -snes_test_jacobian_view - display the user provided Jacobian, the finite difference Jacobian and the difference between them to help users detect the location of errors in the user provided Jacobian.
919 
920     Options Database Keys for Eisenstat-Walker method:
921 +  -snes_ksp_ew - use Eisenstat-Walker method for determining linear system convergence
922 .  -snes_ksp_ew_version ver - version of  Eisenstat-Walker method
923 .  -snes_ksp_ew_rtol0 <rtol0> - Sets rtol0
924 .  -snes_ksp_ew_rtolmax <rtolmax> - Sets rtolmax
925 .  -snes_ksp_ew_gamma <gamma> - Sets gamma
926 .  -snes_ksp_ew_alpha <alpha> - Sets alpha
927 .  -snes_ksp_ew_alpha2 <alpha2> - Sets alpha2
928 -  -snes_ksp_ew_threshold <threshold> - Sets threshold
929 
930    Level: beginner
931 
932    Notes:
933    To see all options, run your program with the -help option or consult the users manual
934 
935    `SNES` supports three approaches for computing (approximate) Jacobians: user provided via `SNESSetJacobian()`, matrix free, and computing explicitly with
936    finite differences and coloring using `MatFDColoring`. It is also possible to use automatic differentiation and the `MatFDColoring` object.
937 
938 .seealso: [](ch_snes), `SNESType`, `SNESSetOptionsPrefix()`, `SNESResetFromOptions()`, `SNES`, `SNESCreate()`
939 @*/
940 PetscErrorCode SNESSetFromOptions(SNES snes)
941 {
942   PetscBool   flg, pcset, persist, set;
943   PetscInt    i, indx, lag, grids;
944   const char *deft        = SNESNEWTONLS;
945   const char *convtests[] = {"default", "skip", "correct_pressure"};
946   SNESKSPEW  *kctx        = NULL;
947   char        type[256], monfilename[PETSC_MAX_PATH_LEN], ewprefix[256];
948   PCSide      pcside;
949   const char *optionsprefix;
950 
951   PetscFunctionBegin;
952   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
953   PetscCall(SNESRegisterAll());
954   PetscObjectOptionsBegin((PetscObject)snes);
955   if (((PetscObject)snes)->type_name) deft = ((PetscObject)snes)->type_name;
956   PetscCall(PetscOptionsFList("-snes_type", "Nonlinear solver method", "SNESSetType", SNESList, deft, type, 256, &flg));
957   if (flg) {
958     PetscCall(SNESSetType(snes, type));
959   } else if (!((PetscObject)snes)->type_name) {
960     PetscCall(SNESSetType(snes, deft));
961   }
962   PetscCall(PetscOptionsReal("-snes_stol", "Stop if step length less than", "SNESSetTolerances", snes->stol, &snes->stol, NULL));
963   PetscCall(PetscOptionsReal("-snes_atol", "Stop if function norm less than", "SNESSetTolerances", snes->abstol, &snes->abstol, NULL));
964 
965   PetscCall(PetscOptionsReal("-snes_rtol", "Stop if decrease in function norm less than", "SNESSetTolerances", snes->rtol, &snes->rtol, NULL));
966   PetscCall(PetscOptionsReal("-snes_divergence_tolerance", "Stop if residual norm increases by this factor", "SNESSetDivergenceTolerance", snes->divtol, &snes->divtol, NULL));
967   PetscCall(PetscOptionsInt("-snes_max_it", "Maximum iterations", "SNESSetTolerances", snes->max_its, &snes->max_its, NULL));
968   PetscCall(PetscOptionsInt("-snes_max_funcs", "Maximum function evaluations", "SNESSetTolerances", snes->max_funcs, &snes->max_funcs, NULL));
969   PetscCall(PetscOptionsInt("-snes_max_fail", "Maximum nonlinear step failures", "SNESSetMaxNonlinearStepFailures", snes->maxFailures, &snes->maxFailures, NULL));
970   PetscCall(PetscOptionsInt("-snes_max_linear_solve_fail", "Maximum failures in linear solves allowed", "SNESSetMaxLinearSolveFailures", snes->maxLinearSolveFailures, &snes->maxLinearSolveFailures, NULL));
971   PetscCall(PetscOptionsBool("-snes_error_if_not_converged", "Generate error if solver does not converge", "SNESSetErrorIfNotConverged", snes->errorifnotconverged, &snes->errorifnotconverged, NULL));
972   PetscCall(PetscOptionsBool("-snes_force_iteration", "Force SNESSolve() to take at least one iteration", "SNESSetForceIteration", snes->forceiteration, &snes->forceiteration, NULL));
973   PetscCall(PetscOptionsBool("-snes_check_jacobian_domain_error", "Check Jacobian domain error after Jacobian evaluation", "SNESCheckJacobianDomainError", snes->checkjacdomainerror, &snes->checkjacdomainerror, NULL));
974 
975   PetscCall(PetscOptionsInt("-snes_lag_preconditioner", "How often to rebuild preconditioner", "SNESSetLagPreconditioner", snes->lagpreconditioner, &lag, &flg));
976   if (flg) {
977     PetscCheck(lag != -1, PetscObjectComm((PetscObject)snes), PETSC_ERR_USER, "Cannot set the lag to -1 from the command line since the preconditioner must be built as least once, perhaps you mean -2");
978     PetscCall(SNESSetLagPreconditioner(snes, lag));
979   }
980   PetscCall(PetscOptionsBool("-snes_lag_preconditioner_persists", "Preconditioner lagging through multiple SNES solves", "SNESSetLagPreconditionerPersists", snes->lagjac_persist, &persist, &flg));
981   if (flg) PetscCall(SNESSetLagPreconditionerPersists(snes, persist));
982   PetscCall(PetscOptionsInt("-snes_lag_jacobian", "How often to rebuild Jacobian", "SNESSetLagJacobian", snes->lagjacobian, &lag, &flg));
983   if (flg) {
984     PetscCheck(lag != -1, PetscObjectComm((PetscObject)snes), PETSC_ERR_USER, "Cannot set the lag to -1 from the command line since the Jacobian must be built as least once, perhaps you mean -2");
985     PetscCall(SNESSetLagJacobian(snes, lag));
986   }
987   PetscCall(PetscOptionsBool("-snes_lag_jacobian_persists", "Jacobian lagging through multiple SNES solves", "SNESSetLagJacobianPersists", snes->lagjac_persist, &persist, &flg));
988   if (flg) PetscCall(SNESSetLagJacobianPersists(snes, persist));
989 
990   PetscCall(PetscOptionsInt("-snes_grid_sequence", "Use grid sequencing to generate initial guess", "SNESSetGridSequence", snes->gridsequence, &grids, &flg));
991   if (flg) PetscCall(SNESSetGridSequence(snes, grids));
992 
993   PetscCall(PetscOptionsEList("-snes_convergence_test", "Convergence test", "SNESSetConvergenceTest", convtests, sizeof(convtests) / sizeof(char *), "default", &indx, &flg));
994   if (flg) {
995     switch (indx) {
996     case 0:
997       PetscCall(SNESSetConvergenceTest(snes, SNESConvergedDefault, NULL, NULL));
998       break;
999     case 1:
1000       PetscCall(SNESSetConvergenceTest(snes, SNESConvergedSkip, NULL, NULL));
1001       break;
1002     case 2:
1003       PetscCall(SNESSetConvergenceTest(snes, SNESConvergedCorrectPressure, NULL, NULL));
1004       break;
1005     }
1006   }
1007 
1008   PetscCall(PetscOptionsEList("-snes_norm_schedule", "SNES Norm schedule", "SNESSetNormSchedule", SNESNormSchedules, 5, "function", &indx, &flg));
1009   if (flg) PetscCall(SNESSetNormSchedule(snes, (SNESNormSchedule)indx));
1010 
1011   PetscCall(PetscOptionsEList("-snes_function_type", "SNES Norm schedule", "SNESSetFunctionType", SNESFunctionTypes, 2, "unpreconditioned", &indx, &flg));
1012   if (flg) PetscCall(SNESSetFunctionType(snes, (SNESFunctionType)indx));
1013 
1014   kctx = (SNESKSPEW *)snes->kspconvctx;
1015 
1016   PetscCall(PetscOptionsBool("-snes_ksp_ew", "Use Eisentat-Walker linear system convergence test", "SNESKSPSetUseEW", snes->ksp_ewconv, &snes->ksp_ewconv, NULL));
1017 
1018   PetscCall(SNESGetOptionsPrefix(snes, &optionsprefix));
1019   PetscCall(PetscSNPrintf(ewprefix, sizeof(ewprefix), "%s%s", optionsprefix ? optionsprefix : "", "snes_"));
1020   PetscCall(SNESEWSetFromOptions_Private(kctx, PETSC_TRUE, PetscObjectComm((PetscObject)snes), ewprefix));
1021 
1022   flg = PETSC_FALSE;
1023   PetscCall(PetscOptionsBool("-snes_monitor_cancel", "Remove all monitors", "SNESMonitorCancel", flg, &flg, &set));
1024   if (set && flg) PetscCall(SNESMonitorCancel(snes));
1025 
1026   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor", "Monitor norm of function", "SNESMonitorDefault", SNESMonitorDefault, SNESMonitorDefaultSetUp));
1027   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_short", "Monitor norm of function with fewer digits", "SNESMonitorDefaultShort", SNESMonitorDefaultShort, NULL));
1028   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_range", "Monitor range of elements of function", "SNESMonitorRange", SNESMonitorRange, NULL));
1029 
1030   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_ratio", "Monitor ratios of the norm of function for consecutive steps", "SNESMonitorRatio", SNESMonitorRatio, SNESMonitorRatioSetUp));
1031   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_field", "Monitor norm of function (split into fields)", "SNESMonitorDefaultField", SNESMonitorDefaultField, NULL));
1032   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_solution", "View solution at each iteration", "SNESMonitorSolution", SNESMonitorSolution, NULL));
1033   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_solution_update", "View correction at each iteration", "SNESMonitorSolutionUpdate", SNESMonitorSolutionUpdate, NULL));
1034   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_residual", "View residual at each iteration", "SNESMonitorResidual", SNESMonitorResidual, NULL));
1035   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_jacupdate_spectrum", "Print the change in the spectrum of the Jacobian", "SNESMonitorJacUpdateSpectrum", SNESMonitorJacUpdateSpectrum, NULL));
1036   PetscCall(SNESMonitorSetFromOptions(snes, "-snes_monitor_fields", "Monitor norm of function per field", "SNESMonitorSet", SNESMonitorFields, NULL));
1037   PetscCall(PetscOptionsBool("-snes_monitor_pause_final", "Pauses all draw monitors at the final iterate", "SNESMonitorPauseFinal_Internal", PETSC_FALSE, &snes->pauseFinal, NULL));
1038 
1039   PetscCall(PetscOptionsString("-snes_monitor_python", "Use Python function", "SNESMonitorSet", NULL, monfilename, sizeof(monfilename), &flg));
1040   if (flg) PetscCall(PetscPythonMonitorSet((PetscObject)snes, monfilename));
1041 
1042   flg = PETSC_FALSE;
1043   PetscCall(PetscOptionsBool("-snes_monitor_lg_range", "Plot function range at each iteration", "SNESMonitorLGRange", flg, &flg, NULL));
1044   if (flg) {
1045     PetscViewer ctx;
1046 
1047     PetscCall(PetscViewerDrawOpen(PetscObjectComm((PetscObject)snes), NULL, NULL, PETSC_DECIDE, PETSC_DECIDE, 400, 300, &ctx));
1048     PetscCall(SNESMonitorSet(snes, SNESMonitorLGRange, ctx, (PetscErrorCode(*)(void **))PetscViewerDestroy));
1049   }
1050 
1051   flg = PETSC_FALSE;
1052   PetscCall(PetscOptionsBool("-snes_converged_reason_view_cancel", "Remove all converged reason viewers", "SNESConvergedReasonViewCancel", flg, &flg, &set));
1053   if (set && flg) PetscCall(SNESConvergedReasonViewCancel(snes));
1054 
1055   flg = PETSC_FALSE;
1056   PetscCall(PetscOptionsBool("-snes_fd", "Use finite differences (slow) to compute Jacobian", "SNESComputeJacobianDefault", flg, &flg, NULL));
1057   if (flg) {
1058     void *functx;
1059     DM    dm;
1060     PetscCall(SNESGetDM(snes, &dm));
1061     PetscCall(DMSNESUnsetJacobianContext_Internal(dm));
1062     PetscCall(SNESGetFunction(snes, NULL, NULL, &functx));
1063     PetscCall(SNESSetJacobian(snes, snes->jacobian, snes->jacobian_pre, SNESComputeJacobianDefault, functx));
1064     PetscCall(PetscInfo(snes, "Setting default finite difference Jacobian matrix\n"));
1065   }
1066 
1067   flg = PETSC_FALSE;
1068   PetscCall(PetscOptionsBool("-snes_fd_function", "Use finite differences (slow) to compute function from user objective", "SNESObjectiveComputeFunctionDefaultFD", flg, &flg, NULL));
1069   if (flg) PetscCall(SNESSetFunction(snes, NULL, SNESObjectiveComputeFunctionDefaultFD, NULL));
1070 
1071   flg = PETSC_FALSE;
1072   PetscCall(PetscOptionsBool("-snes_fd_color", "Use finite differences with coloring to compute Jacobian", "SNESComputeJacobianDefaultColor", flg, &flg, NULL));
1073   if (flg) {
1074     DM dm;
1075     PetscCall(SNESGetDM(snes, &dm));
1076     PetscCall(DMSNESUnsetJacobianContext_Internal(dm));
1077     PetscCall(SNESSetJacobian(snes, snes->jacobian, snes->jacobian_pre, SNESComputeJacobianDefaultColor, NULL));
1078     PetscCall(PetscInfo(snes, "Setting default finite difference coloring Jacobian matrix\n"));
1079   }
1080 
1081   flg = PETSC_FALSE;
1082   PetscCall(PetscOptionsBool("-snes_mf_operator", "Use a Matrix-Free Jacobian with user-provided preconditioner matrix", "SNESSetUseMatrixFree", PETSC_FALSE, &snes->mf_operator, &flg));
1083   if (flg && snes->mf_operator) {
1084     snes->mf_operator = PETSC_TRUE;
1085     snes->mf          = PETSC_TRUE;
1086   }
1087   flg = PETSC_FALSE;
1088   PetscCall(PetscOptionsBool("-snes_mf", "Use a Matrix-Free Jacobian with no preconditioner matrix", "SNESSetUseMatrixFree", PETSC_FALSE, &snes->mf, &flg));
1089   if (!flg && snes->mf_operator) snes->mf = PETSC_TRUE;
1090   PetscCall(PetscOptionsInt("-snes_mf_version", "Matrix-Free routines version 1 or 2", "None", snes->mf_version, &snes->mf_version, NULL));
1091 
1092   flg = PETSC_FALSE;
1093   PetscCall(SNESGetNPCSide(snes, &pcside));
1094   PetscCall(PetscOptionsEnum("-snes_npc_side", "SNES nonlinear preconditioner side", "SNESSetNPCSide", PCSides, (PetscEnum)pcside, (PetscEnum *)&pcside, &flg));
1095   if (flg) PetscCall(SNESSetNPCSide(snes, pcside));
1096 
1097 #if defined(PETSC_HAVE_SAWS)
1098   /*
1099     Publish convergence information using SAWs
1100   */
1101   flg = PETSC_FALSE;
1102   PetscCall(PetscOptionsBool("-snes_monitor_saws", "Publish SNES progress using SAWs", "SNESMonitorSet", flg, &flg, NULL));
1103   if (flg) {
1104     void *ctx;
1105     PetscCall(SNESMonitorSAWsCreate(snes, &ctx));
1106     PetscCall(SNESMonitorSet(snes, SNESMonitorSAWs, ctx, SNESMonitorSAWsDestroy));
1107   }
1108 #endif
1109 #if defined(PETSC_HAVE_SAWS)
1110   {
1111     PetscBool set;
1112     flg = PETSC_FALSE;
1113     PetscCall(PetscOptionsBool("-snes_saws_block", "Block for SAWs at end of SNESSolve", "PetscObjectSAWsBlock", ((PetscObject)snes)->amspublishblock, &flg, &set));
1114     if (set) PetscCall(PetscObjectSAWsSetBlock((PetscObject)snes, flg));
1115   }
1116 #endif
1117 
1118   for (i = 0; i < numberofsetfromoptions; i++) PetscCall((*othersetfromoptions[i])(snes));
1119 
1120   PetscTryTypeMethod(snes, setfromoptions, PetscOptionsObject);
1121 
1122   /* process any options handlers added with PetscObjectAddOptionsHandler() */
1123   PetscCall(PetscObjectProcessOptionsHandlers((PetscObject)snes, PetscOptionsObject));
1124   PetscOptionsEnd();
1125 
1126   if (snes->linesearch) {
1127     PetscCall(SNESGetLineSearch(snes, &snes->linesearch));
1128     PetscCall(SNESLineSearchSetFromOptions(snes->linesearch));
1129   }
1130 
1131   if (snes->usesksp) {
1132     if (!snes->ksp) PetscCall(SNESGetKSP(snes, &snes->ksp));
1133     PetscCall(KSPSetOperators(snes->ksp, snes->jacobian, snes->jacobian_pre));
1134     PetscCall(KSPSetFromOptions(snes->ksp));
1135   }
1136 
1137   /* if user has set the SNES NPC type via options database, create it. */
1138   PetscCall(SNESGetOptionsPrefix(snes, &optionsprefix));
1139   PetscCall(PetscOptionsHasName(((PetscObject)snes)->options, optionsprefix, "-npc_snes_type", &pcset));
1140   if (pcset && (!snes->npc)) PetscCall(SNESGetNPC(snes, &snes->npc));
1141   if (snes->npc) PetscCall(SNESSetFromOptions(snes->npc));
1142   snes->setfromoptionscalled++;
1143   PetscFunctionReturn(PETSC_SUCCESS);
1144 }
1145 
1146 /*@
1147    SNESResetFromOptions - Sets various `SNES` and `KSP` parameters from user options ONLY if the `SNESSetFromOptions()` was previously set from options
1148 
1149    Collective
1150 
1151    Input Parameter:
1152 .  snes - the `SNES` context
1153 
1154    Level: beginner
1155 
1156 .seealso: [](ch_snes), `SNES`, `SNESSetFromOptions()`, `SNESSetOptionsPrefix()`
1157 @*/
1158 PetscErrorCode SNESResetFromOptions(SNES snes)
1159 {
1160   PetscFunctionBegin;
1161   if (snes->setfromoptionscalled) PetscCall(SNESSetFromOptions(snes));
1162   PetscFunctionReturn(PETSC_SUCCESS);
1163 }
1164 
1165 /*@C
1166    SNESSetComputeApplicationContext - Sets an optional function to compute a user-defined context for
1167    the nonlinear solvers.
1168 
1169    Logically Collective; No Fortran Support
1170 
1171    Input Parameters:
1172 +  snes - the `SNES` context
1173 .  compute - function to compute the context
1174 -  destroy - function to destroy the context
1175 
1176    Level: intermediate
1177 
1178    Note:
1179    This routine is useful if you are performing grid sequencing or using `SNESFAS` and need the appropriate context generated for each level.
1180 
1181    Use `SNESSetApplicationContext()` to see the context immediately
1182 
1183 .seealso: [](ch_snes), `SNESGetApplicationContext()`, `SNESSetComputeApplicationContext()`, `SNESSetApplicationContext()`
1184 @*/
1185 PetscErrorCode SNESSetComputeApplicationContext(SNES snes, PetscErrorCode (*compute)(SNES, void **), PetscErrorCode (*destroy)(void **))
1186 {
1187   PetscFunctionBegin;
1188   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1189   snes->ops->usercompute = compute;
1190   snes->ops->userdestroy = destroy;
1191   PetscFunctionReturn(PETSC_SUCCESS);
1192 }
1193 
1194 /*@
1195    SNESSetApplicationContext - Sets the optional user-defined context for the nonlinear solvers.
1196 
1197    Logically Collective
1198 
1199    Input Parameters:
1200 +  snes - the `SNES` context
1201 -  usrP - optional user context
1202 
1203    Level: intermediate
1204 
1205    Notes:
1206    Users can provide a context when constructing the `SNES` options and then access it inside their function, Jacobian, or other evaluation function
1207    with `SNESGetApplicationContext()`
1208 
1209    To provide a function that computes the context for you use `SNESSetComputeApplicationContext()`
1210 
1211    Fortran Note:
1212     You must write a Fortran interface definition for this
1213     function that tells Fortran the Fortran derived data type that you are passing in as the ctx argument.
1214 
1215 .seealso: [](ch_snes), `SNES`, `SNESSetComputeApplicationContext()`, `SNESGetApplicationContext()`
1216 @*/
1217 PetscErrorCode SNESSetApplicationContext(SNES snes, void *usrP)
1218 {
1219   KSP ksp;
1220 
1221   PetscFunctionBegin;
1222   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1223   PetscCall(SNESGetKSP(snes, &ksp));
1224   PetscCall(KSPSetApplicationContext(ksp, usrP));
1225   snes->user = usrP;
1226   PetscFunctionReturn(PETSC_SUCCESS);
1227 }
1228 
1229 /*@
1230    SNESGetApplicationContext - Gets the user-defined context for the
1231    nonlinear solvers set with `SNESGetApplicationContext()` or with `SNESSetComputeApplicationContext()`
1232 
1233    Not Collective
1234 
1235    Input Parameter:
1236 .  snes - `SNES` context
1237 
1238    Output Parameter:
1239 .  usrP - user context
1240 
1241    Level: intermediate
1242 
1243    Fortran Note:
1244    You must write a Fortran interface definition for this
1245    function that tells Fortran the Fortran derived data type that you are passing in as the ctx argument.
1246 
1247 .seealso: [](ch_snes), `SNESSetApplicationContext()`
1248 @*/
1249 PetscErrorCode SNESGetApplicationContext(SNES snes, void *usrP)
1250 {
1251   PetscFunctionBegin;
1252   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1253   *(void **)usrP = snes->user;
1254   PetscFunctionReturn(PETSC_SUCCESS);
1255 }
1256 
1257 /*@
1258    SNESSetUseMatrixFree - indicates that `SNES` should use matrix free finite difference matrix vector products to apply the Jacobian.
1259 
1260    Logically Collective
1261 
1262    Input Parameters:
1263 +  snes - `SNES` context
1264 .  mf_operator - use matrix-free only for the Amat used by `SNESSetJacobian()`, this means the user provided Pmat will continue to be used
1265 -  mf - use matrix-free for both the Amat and Pmat used by `SNESSetJacobian()`, both the Amat and Pmat set in `SNESSetJacobian()` will be ignored. With
1266    this option no matrix element based preconditioners can be used in the linear solve since the matrix won't be explicitly available
1267 
1268    Options Database Keys:
1269 + -snes_mf_operator - use matrix free only for the mat operator
1270 . -snes_mf - use matrix-free for both the mat and pmat operator
1271 . -snes_fd_color - compute the Jacobian via coloring and finite differences.
1272 - -snes_fd - compute the Jacobian via finite differences (slow)
1273 
1274    Level: intermediate
1275 
1276    Note:
1277    `SNES` supports three approaches for computing (approximate) Jacobians: user provided via `SNESSetJacobian()`, matrix-free, and computing explicitly with
1278    finite differences and coloring using `MatFDColoring`. It is also possible to use automatic differentiation and the `MatFDColoring` object.
1279 
1280 .seealso: [](ch_snes), `SNES`, `SNESGetUseMatrixFree()`, `MatCreateSNESMF()`, `SNESComputeJacobianDefaultColor()`
1281 @*/
1282 PetscErrorCode SNESSetUseMatrixFree(SNES snes, PetscBool mf_operator, PetscBool mf)
1283 {
1284   PetscFunctionBegin;
1285   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1286   PetscValidLogicalCollectiveBool(snes, mf_operator, 2);
1287   PetscValidLogicalCollectiveBool(snes, mf, 3);
1288   snes->mf          = mf_operator ? PETSC_TRUE : mf;
1289   snes->mf_operator = mf_operator;
1290   PetscFunctionReturn(PETSC_SUCCESS);
1291 }
1292 
1293 /*@
1294    SNESGetUseMatrixFree - indicates if the `SNES` uses matrix-free finite difference matrix vector products to apply the Jacobian.
1295 
1296    Not Collective, but the resulting flags will be the same on all MPI ranks
1297 
1298    Input Parameter:
1299 .  snes - `SNES` context
1300 
1301    Output Parameters:
1302 +  mf_operator - use matrix-free only for the Amat used by `SNESSetJacobian()`, this means the user provided Pmat will continue to be used
1303 -  mf - use matrix-free for both the Amat and Pmat used by `SNESSetJacobian()`, both the Amat and Pmat set in `SNESSetJacobian()` will be ignored
1304 
1305    Level: intermediate
1306 
1307 .seealso: [](ch_snes), `SNES`, `SNESSetUseMatrixFree()`, `MatCreateSNESMF()`
1308 @*/
1309 PetscErrorCode SNESGetUseMatrixFree(SNES snes, PetscBool *mf_operator, PetscBool *mf)
1310 {
1311   PetscFunctionBegin;
1312   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1313   if (mf) *mf = snes->mf;
1314   if (mf_operator) *mf_operator = snes->mf_operator;
1315   PetscFunctionReturn(PETSC_SUCCESS);
1316 }
1317 
1318 /*@
1319    SNESGetIterationNumber - Gets the number of nonlinear iterations completed
1320    at this time.
1321 
1322    Not Collective
1323 
1324    Input Parameter:
1325 .  snes - `SNES` context
1326 
1327    Output Parameter:
1328 .  iter - iteration number
1329 
1330    Level: intermediate
1331 
1332    Notes:
1333    For example, during the computation of iteration 2 this would return 1.
1334 
1335    This is useful for using lagged Jacobians (where one does not recompute the
1336    Jacobian at each `SNES` iteration). For example, the code
1337 .vb
1338       ierr = SNESGetIterationNumber(snes,&it);
1339       if (!(it % 2)) {
1340         [compute Jacobian here]
1341       }
1342 .ve
1343    can be used in your function that computes the Jacobian to cause the Jacobian to be
1344    recomputed every second `SNES` iteration. See also `SNESSetLagJacobian()`
1345 
1346    After the `SNES` solve is complete this will return the number of nonlinear iterations used.
1347 
1348 .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetLagJacobian()`, `SNESGetLinearSolveIterations()`
1349 @*/
1350 PetscErrorCode SNESGetIterationNumber(SNES snes, PetscInt *iter)
1351 {
1352   PetscFunctionBegin;
1353   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1354   PetscValidIntPointer(iter, 2);
1355   *iter = snes->iter;
1356   PetscFunctionReturn(PETSC_SUCCESS);
1357 }
1358 
1359 /*@
1360    SNESSetIterationNumber - Sets the current iteration number.
1361 
1362    Not Collective
1363 
1364    Input Parameters:
1365 +  snes - `SNES` context
1366 -  iter - iteration number
1367 
1368    Level: developer
1369 
1370 .seealso: [](ch_snes), `SNESGetLinearSolveIterations()`
1371 @*/
1372 PetscErrorCode SNESSetIterationNumber(SNES snes, PetscInt iter)
1373 {
1374   PetscFunctionBegin;
1375   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1376   PetscCall(PetscObjectSAWsTakeAccess((PetscObject)snes));
1377   snes->iter = iter;
1378   PetscCall(PetscObjectSAWsGrantAccess((PetscObject)snes));
1379   PetscFunctionReturn(PETSC_SUCCESS);
1380 }
1381 
1382 /*@
1383    SNESGetNonlinearStepFailures - Gets the number of unsuccessful steps
1384    attempted by the nonlinear solver.
1385 
1386    Not Collective
1387 
1388    Input Parameter:
1389 .  snes - `SNES` context
1390 
1391    Output Parameter:
1392 .  nfails - number of unsuccessful steps attempted
1393 
1394    Level: intermediate
1395 
1396    Note:
1397    This counter is reset to zero for each successive call to `SNESSolve()`.
1398 
1399 .seealso: [](ch_snes), `SNES`, `SNESGetMaxLinearSolveFailures()`, `SNESGetLinearSolveIterations()`, `SNESSetMaxLinearSolveFailures()`, `SNESGetLinearSolveFailures()`,
1400           `SNESSetMaxNonlinearStepFailures()`, `SNESGetMaxNonlinearStepFailures()`
1401 @*/
1402 PetscErrorCode SNESGetNonlinearStepFailures(SNES snes, PetscInt *nfails)
1403 {
1404   PetscFunctionBegin;
1405   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1406   PetscValidIntPointer(nfails, 2);
1407   *nfails = snes->numFailures;
1408   PetscFunctionReturn(PETSC_SUCCESS);
1409 }
1410 
1411 /*@
1412    SNESSetMaxNonlinearStepFailures - Sets the maximum number of unsuccessful steps
1413    attempted by the nonlinear solver before it gives up and generates an error
1414 
1415    Not Collective
1416 
1417    Input Parameters:
1418 +  snes     - `SNES` context
1419 -  maxFails - maximum of unsuccessful steps
1420 
1421    Level: intermediate
1422 
1423 .seealso: [](ch_snes), `SNESSetErrorIfNotConverged()`, `SNESGetMaxLinearSolveFailures()`, `SNESGetLinearSolveIterations()`, `SNESSetMaxLinearSolveFailures()`, `SNESGetLinearSolveFailures()`,
1424           `SNESGetMaxNonlinearStepFailures()`, `SNESGetNonlinearStepFailures()`
1425 @*/
1426 PetscErrorCode SNESSetMaxNonlinearStepFailures(SNES snes, PetscInt maxFails)
1427 {
1428   PetscFunctionBegin;
1429   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1430   snes->maxFailures = maxFails;
1431   PetscFunctionReturn(PETSC_SUCCESS);
1432 }
1433 
1434 /*@
1435    SNESGetMaxNonlinearStepFailures - Gets the maximum number of unsuccessful steps
1436    attempted by the nonlinear solver before it gives up and generates an error
1437 
1438    Not Collective
1439 
1440    Input Parameter:
1441 .  snes     - `SNES` context
1442 
1443    Output Parameter:
1444 .  maxFails - maximum of unsuccessful steps
1445 
1446    Level: intermediate
1447 
1448 .seealso: [](ch_snes), `SNESSetErrorIfNotConverged()`, `SNESGetMaxLinearSolveFailures()`, `SNESGetLinearSolveIterations()`, `SNESSetMaxLinearSolveFailures()`, `SNESGetLinearSolveFailures()`,
1449           `SNESSetMaxNonlinearStepFailures()`, `SNESGetNonlinearStepFailures()`
1450 @*/
1451 PetscErrorCode SNESGetMaxNonlinearStepFailures(SNES snes, PetscInt *maxFails)
1452 {
1453   PetscFunctionBegin;
1454   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1455   PetscValidIntPointer(maxFails, 2);
1456   *maxFails = snes->maxFailures;
1457   PetscFunctionReturn(PETSC_SUCCESS);
1458 }
1459 
1460 /*@
1461    SNESGetNumberFunctionEvals - Gets the number of user provided function evaluations
1462      done by the `SNES` object
1463 
1464    Not Collective
1465 
1466    Input Parameter:
1467 .  snes     - `SNES` context
1468 
1469    Output Parameter:
1470 .  nfuncs - number of evaluations
1471 
1472    Level: intermediate
1473 
1474    Note:
1475     Reset every time `SNESSolve()` is called unless `SNESSetCountersReset()` is used.
1476 
1477 .seealso: [](ch_snes), `SNES`, `SNESGetMaxLinearSolveFailures()`, `SNESGetLinearSolveIterations()`, `SNESSetMaxLinearSolveFailures()`, `SNESGetLinearSolveFailures()`, `SNESSetCountersReset()`
1478 @*/
1479 PetscErrorCode SNESGetNumberFunctionEvals(SNES snes, PetscInt *nfuncs)
1480 {
1481   PetscFunctionBegin;
1482   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1483   PetscValidIntPointer(nfuncs, 2);
1484   *nfuncs = snes->nfuncs;
1485   PetscFunctionReturn(PETSC_SUCCESS);
1486 }
1487 
1488 /*@
1489    SNESGetLinearSolveFailures - Gets the number of failed (non-converged)
1490    linear solvers.
1491 
1492    Not Collective
1493 
1494    Input Parameter:
1495 .  snes - `SNES` context
1496 
1497    Output Parameter:
1498 .  nfails - number of failed solves
1499 
1500    Options Database Key:
1501 . -snes_max_linear_solve_fail <num> - The number of failures before the solve is terminated
1502 
1503    Level: intermediate
1504 
1505    Note:
1506    This counter is reset to zero for each successive call to `SNESSolve()`.
1507 
1508 .seealso: [](ch_snes), `SNESGetMaxLinearSolveFailures()`, `SNESGetLinearSolveIterations()`, `SNESSetMaxLinearSolveFailures()`
1509 @*/
1510 PetscErrorCode SNESGetLinearSolveFailures(SNES snes, PetscInt *nfails)
1511 {
1512   PetscFunctionBegin;
1513   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1514   PetscValidIntPointer(nfails, 2);
1515   *nfails = snes->numLinearSolveFailures;
1516   PetscFunctionReturn(PETSC_SUCCESS);
1517 }
1518 
1519 /*@
1520    SNESSetMaxLinearSolveFailures - the number of failed linear solve attempts
1521    allowed before `SNES` returns with a diverged reason of `SNES_DIVERGED_LINEAR_SOLVE`
1522 
1523    Logically Collective
1524 
1525    Input Parameters:
1526 +  snes     - `SNES` context
1527 -  maxFails - maximum allowed linear solve failures
1528 
1529    Options Database Key:
1530 . -snes_max_linear_solve_fail <num> - The number of failures before the solve is terminated
1531 
1532    Level: intermediate
1533 
1534    Note:
1535     By default this is 0; that is `SNES` returns on the first failed linear solve
1536 
1537 .seealso: [](ch_snes), `SNESSetErrorIfNotConverged()`, `SNESGetLinearSolveFailures()`, `SNESGetMaxLinearSolveFailures()`, `SNESGetLinearSolveIterations()`
1538 @*/
1539 PetscErrorCode SNESSetMaxLinearSolveFailures(SNES snes, PetscInt maxFails)
1540 {
1541   PetscFunctionBegin;
1542   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1543   PetscValidLogicalCollectiveInt(snes, maxFails, 2);
1544   snes->maxLinearSolveFailures = maxFails;
1545   PetscFunctionReturn(PETSC_SUCCESS);
1546 }
1547 
1548 /*@
1549    SNESGetMaxLinearSolveFailures - gets the maximum number of linear solve failures that
1550      are allowed before `SNES` returns as unsuccessful
1551 
1552    Not Collective
1553 
1554    Input Parameter:
1555 .  snes     - `SNES` context
1556 
1557    Output Parameter:
1558 .  maxFails - maximum of unsuccessful solves allowed
1559 
1560    Level: intermediate
1561 
1562    Note:
1563     By default this is 1; that is `SNES` returns on the first failed linear solve
1564 
1565 .seealso: [](ch_snes), `SNESSetErrorIfNotConverged()`, `SNESGetLinearSolveFailures()`, `SNESGetLinearSolveIterations()`, `SNESSetMaxLinearSolveFailures()`,
1566 @*/
1567 PetscErrorCode SNESGetMaxLinearSolveFailures(SNES snes, PetscInt *maxFails)
1568 {
1569   PetscFunctionBegin;
1570   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1571   PetscValidIntPointer(maxFails, 2);
1572   *maxFails = snes->maxLinearSolveFailures;
1573   PetscFunctionReturn(PETSC_SUCCESS);
1574 }
1575 
1576 /*@
1577    SNESGetLinearSolveIterations - Gets the total number of linear iterations
1578    used by the nonlinear solver.
1579 
1580    Not Collective
1581 
1582    Input Parameter:
1583 .  snes - `SNES` context
1584 
1585    Output Parameter:
1586 .  lits - number of linear iterations
1587 
1588    Level: intermediate
1589 
1590    Notes:
1591    This counter is reset to zero for each successive call to `SNESSolve()` unless `SNESSetCountersReset()` is used.
1592 
1593    If the linear solver fails inside the `SNESSolve()` the iterations for that call to the linear solver are not included. If you wish to count them
1594    then call `KSPGetIterationNumber()` after the failed solve.
1595 
1596 .seealso: [](ch_snes), `SNES`, `SNESGetIterationNumber()`, `SNESGetLinearSolveFailures()`, `SNESGetMaxLinearSolveFailures()`, `SNESSetCountersReset()`
1597 @*/
1598 PetscErrorCode SNESGetLinearSolveIterations(SNES snes, PetscInt *lits)
1599 {
1600   PetscFunctionBegin;
1601   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1602   PetscValidIntPointer(lits, 2);
1603   *lits = snes->linear_its;
1604   PetscFunctionReturn(PETSC_SUCCESS);
1605 }
1606 
1607 /*@
1608    SNESSetCountersReset - Sets whether or not the counters for linear iterations and function evaluations
1609    are reset every time `SNESSolve()` is called.
1610 
1611    Logically Collective
1612 
1613    Input Parameters:
1614 +  snes - `SNES` context
1615 -  reset - whether to reset the counters or not, defaults to `PETSC_TRUE`
1616 
1617    Level: developer
1618 
1619 .seealso: [](ch_snes), `SNESGetNumberFunctionEvals()`, `SNESGetLinearSolveIterations()`, `SNESGetNPC()`
1620 @*/
1621 PetscErrorCode SNESSetCountersReset(SNES snes, PetscBool reset)
1622 {
1623   PetscFunctionBegin;
1624   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1625   PetscValidLogicalCollectiveBool(snes, reset, 2);
1626   snes->counters_reset = reset;
1627   PetscFunctionReturn(PETSC_SUCCESS);
1628 }
1629 
1630 /*@
1631    SNESSetKSP - Sets a `KSP` context for the `SNES` object to use
1632 
1633    Not Collective, but the `SNES` and `KSP` objects must live on the same MPI_Comm
1634 
1635    Input Parameters:
1636 +  snes - the `SNES` context
1637 -  ksp - the `KSP` context
1638 
1639    Level: developer
1640 
1641    Notes:
1642    The `SNES` object already has its `KSP` object, you can obtain with `SNESGetKSP()`
1643    so this routine is rarely needed.
1644 
1645    The `KSP` object that is already in the `SNES` object has its reference count
1646    decreased by one.
1647 
1648 .seealso: [](ch_snes), `SNES`, `KSP`, `KSPGetPC()`, `SNESCreate()`, `KSPCreate()`, `SNESSetKSP()`
1649 @*/
1650 PetscErrorCode SNESSetKSP(SNES snes, KSP ksp)
1651 {
1652   PetscFunctionBegin;
1653   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1654   PetscValidHeaderSpecific(ksp, KSP_CLASSID, 2);
1655   PetscCheckSameComm(snes, 1, ksp, 2);
1656   PetscCall(PetscObjectReference((PetscObject)ksp));
1657   if (snes->ksp) PetscCall(PetscObjectDereference((PetscObject)snes->ksp));
1658   snes->ksp = ksp;
1659   PetscFunctionReturn(PETSC_SUCCESS);
1660 }
1661 
1662 /*@
1663    SNESCreate - Creates a nonlinear solver context used to manage a set of nonlinear solves
1664 
1665    Collective
1666 
1667    Input Parameter:
1668 .  comm - MPI communicator
1669 
1670    Output Parameter:
1671 .  outsnes - the new `SNES` context
1672 
1673    Options Database Keys:
1674 +   -snes_mf - Activates default matrix-free Jacobian-vector products, and no preconditioning matrix
1675 .   -snes_mf_operator - Activates default matrix-free Jacobian-vector products, and a user-provided preconditioning matrix
1676                as set by `SNESSetJacobian()`
1677 .   -snes_fd_coloring - uses a relative fast computation of the Jacobian using finite differences and a graph coloring
1678 -   -snes_fd - Uses (slow!) finite differences to compute Jacobian
1679 
1680    Level: beginner
1681 
1682    Developer Notes:
1683    `SNES` always creates a `KSP` object even though many `SNES` methods do not use it. This is
1684    unfortunate and should be fixed at some point. The flag snes->usesksp indicates if the
1685    particular method does use `KSP` and regulates if the information about the `KSP` is printed
1686    in `SNESView()`.
1687 
1688    `TSSetFromOptions()` does call `SNESSetFromOptions()` which can lead to users being confused
1689    by help messages about meaningless `SNES` options.
1690 
1691    `SNES` always creates the snes->kspconvctx even though it is used by only one type. This should be fixed.
1692 
1693 .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESDestroy()`, `SNES`, `SNESSetLagPreconditioner()`, `SNESSetLagJacobian()`
1694 @*/
1695 PetscErrorCode SNESCreate(MPI_Comm comm, SNES *outsnes)
1696 {
1697   SNES       snes;
1698   SNESKSPEW *kctx;
1699 
1700   PetscFunctionBegin;
1701   PetscValidPointer(outsnes, 2);
1702   *outsnes = NULL;
1703   PetscCall(SNESInitializePackage());
1704 
1705   PetscCall(PetscHeaderCreate(snes, SNES_CLASSID, "SNES", "Nonlinear solver", "SNES", comm, SNESDestroy, SNESView));
1706 
1707   snes->ops->converged       = SNESConvergedDefault;
1708   snes->usesksp              = PETSC_TRUE;
1709   snes->tolerancesset        = PETSC_FALSE;
1710   snes->max_its              = 50;
1711   snes->max_funcs            = 10000;
1712   snes->norm                 = 0.0;
1713   snes->xnorm                = 0.0;
1714   snes->ynorm                = 0.0;
1715   snes->normschedule         = SNES_NORM_ALWAYS;
1716   snes->functype             = SNES_FUNCTION_DEFAULT;
1717   snes->rtol                 = PetscDefined(USE_REAL_SINGLE) ? 1.e-5 : 1.e-8;
1718   snes->ttol                 = 0.0;
1719   snes->abstol               = PetscDefined(USE_REAL_SINGLE) ? 1.e-25 : 1.e-50;
1720   snes->stol                 = PetscDefined(USE_REAL_SINGLE) ? 1.e-5 : 1.e-8;
1721   snes->deltatol             = PetscDefined(USE_REAL_SINGLE) ? 1.e-6 : 1.e-12;
1722   snes->divtol               = 1.e4;
1723   snes->rnorm0               = 0;
1724   snes->nfuncs               = 0;
1725   snes->numFailures          = 0;
1726   snes->maxFailures          = 1;
1727   snes->linear_its           = 0;
1728   snes->lagjacobian          = 1;
1729   snes->jac_iter             = 0;
1730   snes->lagjac_persist       = PETSC_FALSE;
1731   snes->lagpreconditioner    = 1;
1732   snes->pre_iter             = 0;
1733   snes->lagpre_persist       = PETSC_FALSE;
1734   snes->numbermonitors       = 0;
1735   snes->numberreasonviews    = 0;
1736   snes->data                 = NULL;
1737   snes->setupcalled          = PETSC_FALSE;
1738   snes->ksp_ewconv           = PETSC_FALSE;
1739   snes->nwork                = 0;
1740   snes->work                 = NULL;
1741   snes->nvwork               = 0;
1742   snes->vwork                = NULL;
1743   snes->conv_hist_len        = 0;
1744   snes->conv_hist_max        = 0;
1745   snes->conv_hist            = NULL;
1746   snes->conv_hist_its        = NULL;
1747   snes->conv_hist_reset      = PETSC_TRUE;
1748   snes->counters_reset       = PETSC_TRUE;
1749   snes->vec_func_init_set    = PETSC_FALSE;
1750   snes->reason               = SNES_CONVERGED_ITERATING;
1751   snes->npcside              = PC_RIGHT;
1752   snes->setfromoptionscalled = 0;
1753 
1754   snes->mf          = PETSC_FALSE;
1755   snes->mf_operator = PETSC_FALSE;
1756   snes->mf_version  = 1;
1757 
1758   snes->numLinearSolveFailures = 0;
1759   snes->maxLinearSolveFailures = 1;
1760 
1761   snes->vizerotolerance     = 1.e-8;
1762   snes->checkjacdomainerror = PetscDefined(USE_DEBUG) ? PETSC_TRUE : PETSC_FALSE;
1763 
1764   /* Set this to true if the implementation of SNESSolve_XXX does compute the residual at the final solution. */
1765   snes->alwayscomputesfinalresidual = PETSC_FALSE;
1766 
1767   /* Create context to compute Eisenstat-Walker relative tolerance for KSP */
1768   PetscCall(PetscNew(&kctx));
1769 
1770   snes->kspconvctx  = (void *)kctx;
1771   kctx->version     = 2;
1772   kctx->rtol_0      = 0.3; /* Eisenstat and Walker suggest rtol_0=.5, but
1773                              this was too large for some test cases */
1774   kctx->rtol_last   = 0.0;
1775   kctx->rtol_max    = 0.9;
1776   kctx->gamma       = 1.0;
1777   kctx->alpha       = 0.5 * (1.0 + PetscSqrtReal(5.0));
1778   kctx->alpha2      = kctx->alpha;
1779   kctx->threshold   = 0.1;
1780   kctx->lresid_last = 0.0;
1781   kctx->norm_last   = 0.0;
1782 
1783   kctx->rk_last     = 0.0;
1784   kctx->rk_last_2   = 0.0;
1785   kctx->rtol_last_2 = 0.0;
1786   kctx->v4_p1       = 0.1;
1787   kctx->v4_p2       = 0.4;
1788   kctx->v4_p3       = 0.7;
1789   kctx->v4_m1       = 0.8;
1790   kctx->v4_m2       = 0.5;
1791   kctx->v4_m3       = 0.1;
1792   kctx->v4_m4       = 0.5;
1793 
1794   *outsnes = snes;
1795   PetscFunctionReturn(PETSC_SUCCESS);
1796 }
1797 
1798 /*MC
1799     SNESFunction - Functional form used to convey the nonlinear function to `SNES` in `SNESSetFunction()`
1800 
1801      Synopsis:
1802      #include "petscsnes.h"
1803      PetscErrorCode SNESFunction(SNES snes,Vec x,Vec f,void *ctx);
1804 
1805      Collective
1806 
1807      Input Parameters:
1808 +     snes - the `SNES` context
1809 .     x    - state at which to evaluate residual
1810 -     ctx     - optional user-defined function context, passed in with `SNESSetFunction()`
1811 
1812      Output Parameter:
1813 .     f  - vector to put residual (function value)
1814 
1815    Level: intermediate
1816 
1817 .seealso: [](ch_snes), `SNESSetFunction()`, `SNESGetFunction()`
1818 M*/
1819 
1820 /*@C
1821    SNESSetFunction - Sets the function evaluation routine and function
1822    vector for use by the `SNES` routines in solving systems of nonlinear
1823    equations.
1824 
1825    Logically Collective
1826 
1827    Input Parameters:
1828 +  snes - the `SNES` context
1829 .  r - vector to store function values, may be `NULL`
1830 .  f - function evaluation routine;  for calling sequence see `SNESFunction`
1831 -  ctx - [optional] user-defined context for private data for the
1832          function evaluation routine (may be `NULL`)
1833 
1834    Level: beginner
1835 
1836 .seealso: [](ch_snes), `SNES`, `SNESGetFunction()`, `SNESComputeFunction()`, `SNESSetJacobian()`, `SNESSetPicard()`, `SNESFunction`
1837 @*/
1838 PetscErrorCode SNESSetFunction(SNES snes, Vec r, PetscErrorCode (*f)(SNES, Vec, Vec, void *), void *ctx)
1839 {
1840   DM dm;
1841 
1842   PetscFunctionBegin;
1843   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1844   if (r) {
1845     PetscValidHeaderSpecific(r, VEC_CLASSID, 2);
1846     PetscCheckSameComm(snes, 1, r, 2);
1847     PetscCall(PetscObjectReference((PetscObject)r));
1848     PetscCall(VecDestroy(&snes->vec_func));
1849     snes->vec_func = r;
1850   }
1851   PetscCall(SNESGetDM(snes, &dm));
1852   PetscCall(DMSNESSetFunction(dm, f, ctx));
1853   if (f == SNESPicardComputeFunction) PetscCall(DMSNESSetMFFunction(dm, SNESPicardComputeMFFunction, ctx));
1854   PetscFunctionReturn(PETSC_SUCCESS);
1855 }
1856 
1857 /*@C
1858    SNESSetInitialFunction - Sets the function vector to be used as the
1859    initial function value at the initialization of the method.  In some
1860    instances, the user has precomputed the function before calling
1861    `SNESSolve()`.  This function allows one to avoid a redundant call
1862    to `SNESComputeFunction()` in that case.
1863 
1864    Logically Collective
1865 
1866    Input Parameters:
1867 +  snes - the `SNES` context
1868 -  f - vector to store function value
1869 
1870    Level: developer
1871 
1872    Notes:
1873    This should not be modified during the solution procedure.
1874 
1875    This is used extensively in the `SNESFAS` hierarchy and in nonlinear preconditioning.
1876 
1877 .seealso: [](ch_snes), `SNES`, `SNESFAS`, `SNESSetFunction()`, `SNESComputeFunction()`, `SNESSetInitialFunctionNorm()`
1878 @*/
1879 PetscErrorCode SNESSetInitialFunction(SNES snes, Vec f)
1880 {
1881   Vec vec_func;
1882 
1883   PetscFunctionBegin;
1884   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1885   PetscValidHeaderSpecific(f, VEC_CLASSID, 2);
1886   PetscCheckSameComm(snes, 1, f, 2);
1887   if (snes->npcside == PC_LEFT && snes->functype == SNES_FUNCTION_PRECONDITIONED) {
1888     snes->vec_func_init_set = PETSC_FALSE;
1889     PetscFunctionReturn(PETSC_SUCCESS);
1890   }
1891   PetscCall(SNESGetFunction(snes, &vec_func, NULL, NULL));
1892   PetscCall(VecCopy(f, vec_func));
1893 
1894   snes->vec_func_init_set = PETSC_TRUE;
1895   PetscFunctionReturn(PETSC_SUCCESS);
1896 }
1897 
1898 /*@
1899    SNESSetNormSchedule - Sets the `SNESNormSchedule` used in convergence and monitoring
1900    of the `SNES` method, when norms are computed in the solving process
1901 
1902    Logically Collective
1903 
1904    Input Parameters:
1905 +  snes - the `SNES` context
1906 -  normschedule - the frequency of norm computation
1907 
1908    Options Database Key:
1909 .  -snes_norm_schedule <none, always, initialonly, finalonly, initialfinalonly> - set the schedule
1910 
1911    Level: advanced
1912 
1913    Notes:
1914    Only certain `SNES` methods support certain `SNESNormSchedules`.  Most require evaluation
1915    of the nonlinear function and the taking of its norm at every iteration to
1916    even ensure convergence at all.  However, methods such as custom Gauss-Seidel methods
1917    `SNESNGS` and the like do not require the norm of the function to be computed, and therefore
1918    may either be monitored for convergence or not.  As these are often used as nonlinear
1919    preconditioners, monitoring the norm of their error is not a useful enterprise within
1920    their solution.
1921 
1922 .seealso: [](ch_snes), `SNESNormSchedule`, `SNESGetNormSchedule()`, `SNESComputeFunction()`, `VecNorm()`, `SNESSetFunction()`, `SNESSetInitialFunction()`, `SNESNormSchedule`
1923 @*/
1924 PetscErrorCode SNESSetNormSchedule(SNES snes, SNESNormSchedule normschedule)
1925 {
1926   PetscFunctionBegin;
1927   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1928   snes->normschedule = normschedule;
1929   PetscFunctionReturn(PETSC_SUCCESS);
1930 }
1931 
1932 /*@
1933    SNESGetNormSchedule - Gets the `SNESNormSchedule` used in convergence and monitoring
1934    of the `SNES` method.
1935 
1936    Logically Collective
1937 
1938    Input Parameters:
1939 +  snes - the `SNES` context
1940 -  normschedule - the type of the norm used
1941 
1942    Level: advanced
1943 
1944 .seealso: [](ch_snes), `SNES`, `SNESSetNormSchedule()`, `SNESComputeFunction()`, `VecNorm()`, `SNESSetFunction()`, `SNESSetInitialFunction()`, `SNESNormSchedule`
1945 @*/
1946 PetscErrorCode SNESGetNormSchedule(SNES snes, SNESNormSchedule *normschedule)
1947 {
1948   PetscFunctionBegin;
1949   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1950   *normschedule = snes->normschedule;
1951   PetscFunctionReturn(PETSC_SUCCESS);
1952 }
1953 
1954 /*@
1955   SNESSetFunctionNorm - Sets the last computed residual norm.
1956 
1957   Logically Collective
1958 
1959   Input Parameters:
1960 +  snes - the `SNES` context
1961 -  norm - the value of the norm
1962 
1963   Level: developer
1964 
1965 .seealso: [](ch_snes), `SNES`, `SNESGetNormSchedule()`, `SNESComputeFunction()`, `VecNorm()`, `SNESSetFunction()`, `SNESSetInitialFunction()`, `SNESNormSchedule`
1966 @*/
1967 PetscErrorCode SNESSetFunctionNorm(SNES snes, PetscReal norm)
1968 {
1969   PetscFunctionBegin;
1970   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1971   snes->norm = norm;
1972   PetscFunctionReturn(PETSC_SUCCESS);
1973 }
1974 
1975 /*@
1976   SNESGetFunctionNorm - Gets the last computed norm of the residual
1977 
1978   Not Collective
1979 
1980   Input Parameter:
1981 . snes - the `SNES` context
1982 
1983   Output Parameter:
1984 . norm - the last computed residual norm
1985 
1986   Level: developer
1987 
1988 .seealso: [](ch_snes), `SNES`, `SNESSetNormSchedule()`, `SNESComputeFunction()`, `VecNorm()`, `SNESSetFunction()`, `SNESSetInitialFunction()`, `SNESNormSchedule`
1989 @*/
1990 PetscErrorCode SNESGetFunctionNorm(SNES snes, PetscReal *norm)
1991 {
1992   PetscFunctionBegin;
1993   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
1994   PetscValidRealPointer(norm, 2);
1995   *norm = snes->norm;
1996   PetscFunctionReturn(PETSC_SUCCESS);
1997 }
1998 
1999 /*@
2000   SNESGetUpdateNorm - Gets the last computed norm of the solution update
2001 
2002   Not Collective
2003 
2004   Input Parameter:
2005 . snes - the `SNES` context
2006 
2007   Output Parameter:
2008 . ynorm - the last computed update norm
2009 
2010   Level: developer
2011 
2012   Note:
2013   The new solution is the current solution plus the update, so this norm is an indication of the size of the update
2014 
2015 .seealso: [](ch_snes), `SNES`, `SNESSetNormSchedule()`, `SNESComputeFunction()`, `SNESGetFunctionNorm()`
2016 @*/
2017 PetscErrorCode SNESGetUpdateNorm(SNES snes, PetscReal *ynorm)
2018 {
2019   PetscFunctionBegin;
2020   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2021   PetscValidRealPointer(ynorm, 2);
2022   *ynorm = snes->ynorm;
2023   PetscFunctionReturn(PETSC_SUCCESS);
2024 }
2025 
2026 /*@
2027   SNESGetSolutionNorm - Gets the last computed norm of the solution
2028 
2029   Not Collective
2030 
2031   Input Parameter:
2032 . snes - the `SNES` context
2033 
2034   Output Parameter:
2035 . xnorm - the last computed solution norm
2036 
2037   Level: developer
2038 
2039 .seealso: [](ch_snes), `SNES`, `SNESSetNormSchedule()`, `SNESComputeFunction()`, `SNESGetFunctionNorm()`, `SNESGetUpdateNorm()`
2040 @*/
2041 PetscErrorCode SNESGetSolutionNorm(SNES snes, PetscReal *xnorm)
2042 {
2043   PetscFunctionBegin;
2044   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2045   PetscValidRealPointer(xnorm, 2);
2046   *xnorm = snes->xnorm;
2047   PetscFunctionReturn(PETSC_SUCCESS);
2048 }
2049 
2050 /*@C
2051    SNESSetFunctionType - Sets the `SNESFunctionType`
2052    of the `SNES` method.
2053 
2054    Logically Collective
2055 
2056    Input Parameters:
2057 +  snes - the `SNES` context
2058 -  type - the function type
2059 
2060    Level: developer
2061 
2062    Notes:
2063    Possible values of the function type
2064 +  `SNES_FUNCTION_DEFAULT` - the default for the given `SNESType`
2065 .  `SNES_FUNCTION_UNPRECONDITIONED` - an unpreconditioned function evaluation (this is the function provided with `SNESSetFunction()`
2066 -  `SNES_FUNCTION_PRECONDITIONED` - a transformation of the function provided with `SNESSetFunction()`
2067 
2068    Different `SNESType`s use this value in different ways
2069 
2070 .seealso: [](ch_snes), `SNES`, `SNESFunctionType`, `SNESGetNormSchedule()`, `SNESComputeFunction()`, `VecNorm()`, `SNESSetFunction()`, `SNESSetInitialFunction()`, `SNESNormSchedule`
2071 @*/
2072 PetscErrorCode SNESSetFunctionType(SNES snes, SNESFunctionType type)
2073 {
2074   PetscFunctionBegin;
2075   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2076   snes->functype = type;
2077   PetscFunctionReturn(PETSC_SUCCESS);
2078 }
2079 
2080 /*@C
2081    SNESGetFunctionType - Gets the `SNESFunctionType` used in convergence and monitoring set with `SNESSetFunctionType()`
2082    of the SNES method.
2083 
2084    Logically Collective
2085 
2086    Input Parameters:
2087 +  snes - the `SNES` context
2088 -  type - the type of the function evaluation, see `SNESSetFunctionType()`
2089 
2090    Level: advanced
2091 
2092 .seealso: [](ch_snes), `SNESSetFunctionType()`, `SNESFunctionType`, `SNESSetNormSchedule()`, `SNESComputeFunction()`, `VecNorm()`, `SNESSetFunction()`, `SNESSetInitialFunction()`, `SNESNormSchedule`
2093 @*/
2094 PetscErrorCode SNESGetFunctionType(SNES snes, SNESFunctionType *type)
2095 {
2096   PetscFunctionBegin;
2097   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2098   *type = snes->functype;
2099   PetscFunctionReturn(PETSC_SUCCESS);
2100 }
2101 
2102 /*@C
2103    SNESSetNGS - Sets the user nonlinear Gauss-Seidel routine for
2104    use with composed nonlinear solvers.
2105 
2106    Input Parameters:
2107 +  snes   - the `SNES` context
2108 .  f - function evaluation routine to apply Gauss-Seidel
2109 -  ctx    - [optional] user-defined context for private data for the
2110             smoother evaluation routine (may be `NULL`)
2111 
2112    Calling sequence of `f`:
2113 $  PetscErrorCode f(SNES snes, Vec X, Vec B, void *ctx)
2114 +  snes - the `SNES` context
2115 .  X - the current solution
2116 .  B - the right hand side vector (which may be `NULL`)
2117 -  ctx - a user provided context
2118 
2119    Level: intermediate
2120 
2121    Note:
2122    The `SNESNGS` routines are used by the composed nonlinear solver to generate
2123     a problem appropriate update to the solution, particularly `SNESFAS`.
2124 
2125 .seealso: [](ch_snes), `SNESGetNGS()`, `SNESNCG`, `SNESGetFunction()`, `SNESComputeNGS()`
2126 @*/
2127 PetscErrorCode SNESSetNGS(SNES snes, PetscErrorCode (*f)(SNES, Vec, Vec, void *), void *ctx)
2128 {
2129   DM dm;
2130 
2131   PetscFunctionBegin;
2132   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2133   PetscCall(SNESGetDM(snes, &dm));
2134   PetscCall(DMSNESSetNGS(dm, f, ctx));
2135   PetscFunctionReturn(PETSC_SUCCESS);
2136 }
2137 
2138 /*
2139      This is used for -snes_mf_operator; it uses a duplicate of snes->jacobian_pre because snes->jacobian_pre cannot be
2140    changed during the KSPSolve()
2141 */
2142 PetscErrorCode SNESPicardComputeMFFunction(SNES snes, Vec x, Vec f, void *ctx)
2143 {
2144   DM     dm;
2145   DMSNES sdm;
2146 
2147   PetscFunctionBegin;
2148   PetscCall(SNESGetDM(snes, &dm));
2149   PetscCall(DMGetDMSNES(dm, &sdm));
2150   /*  A(x)*x - b(x) */
2151   if (sdm->ops->computepfunction) {
2152     PetscCallBack("SNES Picard callback function", (*sdm->ops->computepfunction)(snes, x, f, sdm->pctx));
2153     PetscCall(VecScale(f, -1.0));
2154     /* Cannot share nonzero pattern because of the possible use of SNESComputeJacobianDefault() */
2155     if (!snes->picard) PetscCall(MatDuplicate(snes->jacobian_pre, MAT_DO_NOT_COPY_VALUES, &snes->picard));
2156     PetscCallBack("SNES Picard callback Jacobian", (*sdm->ops->computepjacobian)(snes, x, snes->picard, snes->picard, sdm->pctx));
2157     PetscCall(MatMultAdd(snes->picard, x, f, f));
2158   } else {
2159     PetscCallBack("SNES Picard callback Jacobian", (*sdm->ops->computepjacobian)(snes, x, snes->picard, snes->picard, sdm->pctx));
2160     PetscCall(MatMult(snes->picard, x, f));
2161   }
2162   PetscFunctionReturn(PETSC_SUCCESS);
2163 }
2164 
2165 PetscErrorCode SNESPicardComputeFunction(SNES snes, Vec x, Vec f, void *ctx)
2166 {
2167   DM     dm;
2168   DMSNES sdm;
2169 
2170   PetscFunctionBegin;
2171   PetscCall(SNESGetDM(snes, &dm));
2172   PetscCall(DMGetDMSNES(dm, &sdm));
2173   /*  A(x)*x - b(x) */
2174   if (sdm->ops->computepfunction) {
2175     PetscCallBack("SNES Picard callback function", (*sdm->ops->computepfunction)(snes, x, f, sdm->pctx));
2176     PetscCall(VecScale(f, -1.0));
2177     PetscCallBack("SNES Picard callback Jacobian", (*sdm->ops->computepjacobian)(snes, x, snes->jacobian, snes->jacobian_pre, sdm->pctx));
2178     PetscCall(MatMultAdd(snes->jacobian_pre, x, f, f));
2179   } else {
2180     PetscCallBack("SNES Picard callback Jacobian", (*sdm->ops->computepjacobian)(snes, x, snes->jacobian, snes->jacobian_pre, sdm->pctx));
2181     PetscCall(MatMult(snes->jacobian_pre, x, f));
2182   }
2183   PetscFunctionReturn(PETSC_SUCCESS);
2184 }
2185 
2186 PetscErrorCode SNESPicardComputeJacobian(SNES snes, Vec x1, Mat J, Mat B, void *ctx)
2187 {
2188   PetscFunctionBegin;
2189   /* the jacobian matrix should be pre-filled in SNESPicardComputeFunction */
2190   /* must assembly if matrix-free to get the last SNES solution */
2191   PetscCall(MatAssemblyBegin(J, MAT_FINAL_ASSEMBLY));
2192   PetscCall(MatAssemblyEnd(J, MAT_FINAL_ASSEMBLY));
2193   PetscFunctionReturn(PETSC_SUCCESS);
2194 }
2195 
2196 /*@C
2197    SNESSetPicard - Use `SNES` to solve the system A(x) x = bp(x) + b via a Picard type iteration (Picard linearization)
2198 
2199    Logically Collective
2200 
2201    Input Parameters:
2202 +  snes - the `SNES` context
2203 .  r - vector to store function values, may be `NULL`
2204 .  bp - function evaluation routine, may be `NULL`
2205 .  Amat - matrix with which A(x) x - bp(x) - b is to be computed
2206 .  Pmat - matrix from which preconditioner is computed (usually the same as `Amat`)
2207 .  J  - function to compute matrix values, for the calling sequence see `SNESJacobianFunction()`
2208 -  ctx - [optional] user-defined context for private data for the function evaluation routine (may be `NULL`)
2209 
2210    Level: intermediate
2211 
2212    Notes:
2213     It is often better to provide the nonlinear function F() and some approximation to its Jacobian directly and use
2214     an approximate Newton solver. This interface is provided to allow porting/testing a previous Picard based code in PETSc before converting it to approximate Newton.
2215 
2216     One can call `SNESSetPicard()` or `SNESSetFunction()` (and possibly `SNESSetJacobian()`) but cannot call both
2217 
2218      Solves the equation A(x) x = bp(x) - b via the defect correction algorithm A(x^{n}) (x^{n+1} - x^{n}) = bp(x^{n}) + b - A(x^{n})x^{n}.
2219      When an exact solver is used this corresponds to the "classic" Picard A(x^{n}) x^{n+1} = bp(x^{n}) + b iteration.
2220 
2221      Run with `-snes_mf_operator` to solve the system with Newton's method using A(x^{n}) to construct the preconditioner.
2222 
2223    We implement the defect correction form of the Picard iteration because it converges much more generally when inexact linear solvers are used then
2224    the direct Picard iteration A(x^n) x^{n+1} = bp(x^n) + b
2225 
2226    There is some controversity over the definition of a Picard iteration for nonlinear systems but almost everyone agrees that it involves a linear solve and some
2227    believe it is the iteration  A(x^{n}) x^{n+1} = b(x^{n}) hence we use the name Picard. If anyone has an authoritative  reference that defines the Picard iteration
2228    different please contact us at petsc-dev@mcs.anl.gov and we'll have an entirely new argument :-).
2229 
2230    When used with `-snes_mf_operator` this will run matrix-free Newton's method where the matrix-vector product is of the true Jacobian of A(x)x - bp(x) -b and
2231     A(x^{n}) is used to build the preconditioner
2232 
2233    When used with `-snes_fd` this will compute the true Jacobian (very slowly one column at at time) and thus represent Newton's method.
2234 
2235    When used with `-snes_fd_coloring` this will compute the Jacobian via coloring and thus represent a faster implementation of Newton's method. But the
2236    the nonzero structure of the Jacobian is, in general larger than that of the Picard matrix A so you must provide in A the needed nonzero structure for the correct
2237    coloring. When using `DMDA` this may mean creating the matrix A with `DMCreateMatrix()` using a wider stencil than strictly needed for A or with a `DMDA_STENCIL_BOX`.
2238    See the comment in src/snes/tutorials/ex15.c.
2239 
2240 .seealso: [](ch_snes), `SNES`, `SNESGetFunction()`, `SNESSetFunction()`, `SNESComputeFunction()`, `SNESSetJacobian()`, `SNESGetPicard()`, `SNESLineSearchPreCheckPicard()`, `SNESJacobianFunction`
2241 @*/
2242 PetscErrorCode SNESSetPicard(SNES snes, Vec r, PetscErrorCode (*bp)(SNES, Vec, Vec, void *), Mat Amat, Mat Pmat, PetscErrorCode (*J)(SNES, Vec, Mat, Mat, void *), void *ctx)
2243 {
2244   DM dm;
2245 
2246   PetscFunctionBegin;
2247   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2248   PetscCall(SNESGetDM(snes, &dm));
2249   PetscCall(DMSNESSetPicard(dm, bp, J, ctx));
2250   PetscCall(DMSNESSetMFFunction(dm, SNESPicardComputeMFFunction, ctx));
2251   PetscCall(SNESSetFunction(snes, r, SNESPicardComputeFunction, ctx));
2252   PetscCall(SNESSetJacobian(snes, Amat, Pmat, SNESPicardComputeJacobian, ctx));
2253   PetscFunctionReturn(PETSC_SUCCESS);
2254 }
2255 
2256 /*@C
2257    SNESGetPicard - Returns the context for the Picard iteration
2258 
2259    Not Collective, but `Vec` is parallel if `SNES` is parallel. Collective if `Vec` is requested, but has not been created yet.
2260 
2261    Input Parameter:
2262 .  snes - the `SNES` context
2263 
2264    Output Parameters:
2265 +  r - the function (or `NULL`)
2266 .  f - the function (or `NULL`);  for calling sequence see `SNESFunction`
2267 .  Amat - the matrix used to defined the operation A(x) x - b(x) (or `NULL`)
2268 .  Pmat  - the matrix from which the preconditioner will be constructed (or `NULL`)
2269 .  J - the function for matrix evaluation (or `NULL`);  for calling sequence see `SNESJacobianFunction`
2270 -  ctx - the function context (or `NULL`)
2271 
2272    Level: advanced
2273 
2274 .seealso: [](ch_snes), `SNESSetFunction()`, `SNESSetPicard()`, `SNESGetFunction()`, `SNESGetJacobian()`, `SNESGetDM()`, `SNESFunction`, `SNESJacobianFunction`
2275 @*/
2276 PetscErrorCode SNESGetPicard(SNES snes, Vec *r, PetscErrorCode (**f)(SNES, Vec, Vec, void *), Mat *Amat, Mat *Pmat, PetscErrorCode (**J)(SNES, Vec, Mat, Mat, void *), void **ctx)
2277 {
2278   DM dm;
2279 
2280   PetscFunctionBegin;
2281   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2282   PetscCall(SNESGetFunction(snes, r, NULL, NULL));
2283   PetscCall(SNESGetJacobian(snes, Amat, Pmat, NULL, NULL));
2284   PetscCall(SNESGetDM(snes, &dm));
2285   PetscCall(DMSNESGetPicard(dm, f, J, ctx));
2286   PetscFunctionReturn(PETSC_SUCCESS);
2287 }
2288 
2289 /*@C
2290    SNESSetComputeInitialGuess - Sets a routine used to compute an initial guess for the nonlinear problem
2291 
2292    Logically Collective
2293 
2294    Input Parameters:
2295 +  snes - the `SNES` context
2296 .  func - function evaluation routine
2297 -  ctx - [optional] user-defined context for private data for the
2298          function evaluation routine (may be `NULL`)
2299 
2300    Calling sequence of `func`:
2301 $    PetscErrorCode func(SNES snes, Vec x, void *ctx);
2302 +  snes - the `SNES` solver
2303 .  x - vector to put initial guess
2304 -  ctx - optional user-defined function context
2305 
2306    Level: intermediate
2307 
2308 .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESGetFunction()`, `SNESComputeFunction()`, `SNESSetJacobian()`
2309 @*/
2310 PetscErrorCode SNESSetComputeInitialGuess(SNES snes, PetscErrorCode (*func)(SNES, Vec, void *), void *ctx)
2311 {
2312   PetscFunctionBegin;
2313   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2314   if (func) snes->ops->computeinitialguess = func;
2315   if (ctx) snes->initialguessP = ctx;
2316   PetscFunctionReturn(PETSC_SUCCESS);
2317 }
2318 
2319 /*@C
2320    SNESGetRhs - Gets the vector for solving F(x) = `rhs`. If `rhs` is not set
2321    it assumes a zero right hand side.
2322 
2323    Logically Collective
2324 
2325    Input Parameter:
2326 .  snes - the `SNES` context
2327 
2328    Output Parameter:
2329 .  rhs - the right hand side vector or `NULL` if the right hand side vector is null
2330 
2331    Level: intermediate
2332 
2333 .seealso: [](ch_snes), `SNES`, `SNESGetSolution()`, `SNESGetFunction()`, `SNESComputeFunction()`, `SNESSetJacobian()`, `SNESSetFunction()`
2334 @*/
2335 PetscErrorCode SNESGetRhs(SNES snes, Vec *rhs)
2336 {
2337   PetscFunctionBegin;
2338   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2339   PetscValidPointer(rhs, 2);
2340   *rhs = snes->vec_rhs;
2341   PetscFunctionReturn(PETSC_SUCCESS);
2342 }
2343 
2344 /*@
2345    SNESComputeFunction - Calls the function that has been set with `SNESSetFunction()`.
2346 
2347    Collective
2348 
2349    Input Parameters:
2350 +  snes - the `SNES` context
2351 -  x - input vector
2352 
2353    Output Parameter:
2354 .  y - function vector, as set by `SNESSetFunction()`
2355 
2356    Level: developer
2357 
2358    Note:
2359    `SNESComputeFunction()` is typically used within nonlinear solvers
2360    implementations, so users would not generally call this routine themselves.
2361 
2362 .seealso: [](ch_snes), `SNES`, `SNESSetFunction()`, `SNESGetFunction()`, `SNESComputeMFFunction()`
2363 @*/
2364 PetscErrorCode SNESComputeFunction(SNES snes, Vec x, Vec y)
2365 {
2366   DM     dm;
2367   DMSNES sdm;
2368 
2369   PetscFunctionBegin;
2370   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2371   PetscValidHeaderSpecific(x, VEC_CLASSID, 2);
2372   PetscValidHeaderSpecific(y, VEC_CLASSID, 3);
2373   PetscCheckSameComm(snes, 1, x, 2);
2374   PetscCheckSameComm(snes, 1, y, 3);
2375   PetscCall(VecValidValues_Internal(x, 2, PETSC_TRUE));
2376 
2377   PetscCall(SNESGetDM(snes, &dm));
2378   PetscCall(DMGetDMSNES(dm, &sdm));
2379   PetscCheck(sdm->ops->computefunction || snes->vec_rhs, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Must call SNESSetFunction() or SNESSetDM() before SNESComputeFunction(), likely called from SNESSolve().");
2380   if (sdm->ops->computefunction) {
2381     if (sdm->ops->computefunction != SNESObjectiveComputeFunctionDefaultFD) PetscCall(PetscLogEventBegin(SNES_FunctionEval, snes, x, y, 0));
2382     PetscCall(VecLockReadPush(x));
2383     /* ensure domainerror is false prior to computefunction evaluation (may not have been reset) */
2384     snes->domainerror = PETSC_FALSE;
2385     {
2386       void *ctx;
2387       PetscErrorCode (*computefunction)(SNES, Vec, Vec, void *);
2388       PetscCall(DMSNESGetFunction(dm, &computefunction, &ctx));
2389       PetscCallBack("SNES callback function", (*computefunction)(snes, x, y, ctx));
2390     }
2391     PetscCall(VecLockReadPop(x));
2392     if (sdm->ops->computefunction != SNESObjectiveComputeFunctionDefaultFD) PetscCall(PetscLogEventEnd(SNES_FunctionEval, snes, x, y, 0));
2393   } else /* if (snes->vec_rhs) */ {
2394     PetscCall(MatMult(snes->jacobian, x, y));
2395   }
2396   if (snes->vec_rhs) PetscCall(VecAXPY(y, -1.0, snes->vec_rhs));
2397   snes->nfuncs++;
2398   /*
2399      domainerror might not be set on all processes; so we tag vector locally with Inf and the next inner product or norm will
2400      propagate the value to all processes
2401   */
2402   if (snes->domainerror) PetscCall(VecSetInf(y));
2403   PetscFunctionReturn(PETSC_SUCCESS);
2404 }
2405 
2406 /*@
2407    SNESComputeMFFunction - Calls the function that has been set with `SNESSetMFFunction()`.
2408 
2409    Collective
2410 
2411    Input Parameters:
2412 +  snes - the `SNES` context
2413 -  x - input vector
2414 
2415    Output Parameter:
2416 .  y - function vector, as set by `SNESSetMFFunction()`
2417 
2418    Level: developer
2419 
2420    Notes:
2421    `SNESComputeMFFunction()` is used within the matrix vector products called by the matrix created with `MatCreateSNESMF()`
2422    so users would not generally call this routine themselves.
2423 
2424     Since this function is intended for use with finite differencing it does not subtract the right hand side vector provided with `SNESSolve()`
2425     while `SNESComputeFunction()` does. As such, this routine cannot be used with  `MatMFFDSetBase()` with a provided F function value even if it applies the
2426     same function as `SNESComputeFunction()` if a `SNESSolve()` right hand side vector is use because the two functions difference would include this right hand side function.
2427 
2428 .seealso: [](ch_snes), `SNES`, `SNESSetFunction()`, `SNESGetFunction()`, `SNESComputeFunction()`, `MatCreateSNESMF`
2429 @*/
2430 PetscErrorCode SNESComputeMFFunction(SNES snes, Vec x, Vec y)
2431 {
2432   DM     dm;
2433   DMSNES sdm;
2434 
2435   PetscFunctionBegin;
2436   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2437   PetscValidHeaderSpecific(x, VEC_CLASSID, 2);
2438   PetscValidHeaderSpecific(y, VEC_CLASSID, 3);
2439   PetscCheckSameComm(snes, 1, x, 2);
2440   PetscCheckSameComm(snes, 1, y, 3);
2441   PetscCall(VecValidValues_Internal(x, 2, PETSC_TRUE));
2442 
2443   PetscCall(SNESGetDM(snes, &dm));
2444   PetscCall(DMGetDMSNES(dm, &sdm));
2445   PetscCall(PetscLogEventBegin(SNES_FunctionEval, snes, x, y, 0));
2446   PetscCall(VecLockReadPush(x));
2447   /* ensure domainerror is false prior to computefunction evaluation (may not have been reset) */
2448   snes->domainerror = PETSC_FALSE;
2449   PetscCallBack("SNES callback function", (*sdm->ops->computemffunction)(snes, x, y, sdm->mffunctionctx));
2450   PetscCall(VecLockReadPop(x));
2451   PetscCall(PetscLogEventEnd(SNES_FunctionEval, snes, x, y, 0));
2452   snes->nfuncs++;
2453   /*
2454      domainerror might not be set on all processes; so we tag vector locally with Inf and the next inner product or norm will
2455      propagate the value to all processes
2456   */
2457   if (snes->domainerror) PetscCall(VecSetInf(y));
2458   PetscFunctionReturn(PETSC_SUCCESS);
2459 }
2460 
2461 /*@
2462    SNESComputeNGS - Calls the Gauss-Seidel function that has been set with  `SNESSetNGS()`.
2463 
2464    Collective
2465 
2466    Input Parameters:
2467 +  snes - the `SNES` context
2468 .  x - input vector
2469 -  b - rhs vector
2470 
2471    Output Parameter:
2472 .  x - new solution vector
2473 
2474    Level: developer
2475 
2476    Note:
2477    `SNESComputeNGS()` is typically used within composed nonlinear solver
2478    implementations, so most users would not generally call this routine
2479    themselves.
2480 
2481 .seealso: [](ch_snes), `SNESNGS`, `SNESSetNGS()`, `SNESComputeFunction()`
2482 @*/
2483 PetscErrorCode SNESComputeNGS(SNES snes, Vec b, Vec x)
2484 {
2485   DM     dm;
2486   DMSNES sdm;
2487 
2488   PetscFunctionBegin;
2489   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2490   PetscValidHeaderSpecific(x, VEC_CLASSID, 3);
2491   if (b) PetscValidHeaderSpecific(b, VEC_CLASSID, 2);
2492   PetscCheckSameComm(snes, 1, x, 3);
2493   if (b) PetscCheckSameComm(snes, 1, b, 2);
2494   if (b) PetscCall(VecValidValues_Internal(b, 2, PETSC_TRUE));
2495   PetscCall(PetscLogEventBegin(SNES_NGSEval, snes, x, b, 0));
2496   PetscCall(SNESGetDM(snes, &dm));
2497   PetscCall(DMGetDMSNES(dm, &sdm));
2498   PetscCheck(sdm->ops->computegs, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Must call SNESSetNGS() before SNESComputeNGS(), likely called from SNESSolve().");
2499   if (b) PetscCall(VecLockReadPush(b));
2500   PetscCallBack("SNES callback NGS", (*sdm->ops->computegs)(snes, x, b, sdm->gsctx));
2501   if (b) PetscCall(VecLockReadPop(b));
2502   PetscCall(PetscLogEventEnd(SNES_NGSEval, snes, x, b, 0));
2503   PetscFunctionReturn(PETSC_SUCCESS);
2504 }
2505 
2506 PetscErrorCode SNESTestJacobian(SNES snes)
2507 {
2508   Mat               A, B, C, D, jacobian;
2509   Vec               x = snes->vec_sol, f = snes->vec_func;
2510   PetscReal         nrm, gnorm;
2511   PetscReal         threshold = 1.e-5;
2512   MatType           mattype;
2513   PetscInt          m, n, M, N;
2514   void             *functx;
2515   PetscBool         complete_print = PETSC_FALSE, threshold_print = PETSC_FALSE, test = PETSC_FALSE, flg, istranspose;
2516   PetscViewer       viewer, mviewer;
2517   MPI_Comm          comm;
2518   PetscInt          tabs;
2519   static PetscBool  directionsprinted = PETSC_FALSE;
2520   PetscViewerFormat format;
2521 
2522   PetscFunctionBegin;
2523   PetscObjectOptionsBegin((PetscObject)snes);
2524   PetscCall(PetscOptionsName("-snes_test_jacobian", "Compare hand-coded and finite difference Jacobians", "None", &test));
2525   PetscCall(PetscOptionsReal("-snes_test_jacobian", "Threshold for element difference between hand-coded and finite difference being meaningful", "None", threshold, &threshold, NULL));
2526   PetscCall(PetscOptionsDeprecated("-snes_test_jacobian_display", "-snes_test_jacobian_view", "3.13", NULL));
2527   PetscCall(PetscOptionsViewer("-snes_test_jacobian_view", "View difference between hand-coded and finite difference Jacobians element entries", "None", &mviewer, &format, &complete_print));
2528   PetscCall(PetscOptionsDeprecated("-snes_test_jacobian_display_threshold", "-snes_test_jacobian", "3.13", "-snes_test_jacobian accepts an optional threshold (since v3.10)"));
2529   /* Cannot remove the what otherwise would be redundant call to (PetscOptionsReal("-snes_test_jacobian_display_threshold") below because its usage is different than the replacement usage */
2530   PetscCall(PetscOptionsReal("-snes_test_jacobian_display_threshold", "Display difference between hand-coded and finite difference Jacobians which exceed input threshold", "None", threshold, &threshold, &threshold_print));
2531   PetscOptionsEnd();
2532   if (!test) PetscFunctionReturn(PETSC_SUCCESS);
2533 
2534   PetscCall(PetscObjectGetComm((PetscObject)snes, &comm));
2535   PetscCall(PetscViewerASCIIGetStdout(comm, &viewer));
2536   PetscCall(PetscViewerASCIIGetTab(viewer, &tabs));
2537   PetscCall(PetscViewerASCIISetTab(viewer, ((PetscObject)snes)->tablevel));
2538   PetscCall(PetscViewerASCIIPrintf(viewer, "  ---------- Testing Jacobian -------------\n"));
2539   if (!complete_print && !directionsprinted) {
2540     PetscCall(PetscViewerASCIIPrintf(viewer, "  Run with -snes_test_jacobian_view and optionally -snes_test_jacobian <threshold> to show difference\n"));
2541     PetscCall(PetscViewerASCIIPrintf(viewer, "    of hand-coded and finite difference Jacobian entries greater than <threshold>.\n"));
2542   }
2543   if (!directionsprinted) {
2544     PetscCall(PetscViewerASCIIPrintf(viewer, "  Testing hand-coded Jacobian, if (for double precision runs) ||J - Jfd||_F/||J||_F is\n"));
2545     PetscCall(PetscViewerASCIIPrintf(viewer, "    O(1.e-8), the hand-coded Jacobian is probably correct.\n"));
2546     directionsprinted = PETSC_TRUE;
2547   }
2548   if (complete_print) PetscCall(PetscViewerPushFormat(mviewer, format));
2549 
2550   PetscCall(PetscObjectTypeCompare((PetscObject)snes->jacobian, MATMFFD, &flg));
2551   if (!flg) jacobian = snes->jacobian;
2552   else jacobian = snes->jacobian_pre;
2553 
2554   if (!x) {
2555     PetscCall(MatCreateVecs(jacobian, &x, NULL));
2556   } else {
2557     PetscCall(PetscObjectReference((PetscObject)x));
2558   }
2559   if (!f) {
2560     PetscCall(VecDuplicate(x, &f));
2561   } else {
2562     PetscCall(PetscObjectReference((PetscObject)f));
2563   }
2564   /* evaluate the function at this point because SNESComputeJacobianDefault() assumes that the function has been evaluated and put into snes->vec_func */
2565   PetscCall(SNESComputeFunction(snes, x, f));
2566   PetscCall(VecDestroy(&f));
2567   PetscCall(PetscObjectTypeCompare((PetscObject)snes, SNESKSPTRANSPOSEONLY, &istranspose));
2568   while (jacobian) {
2569     Mat JT = NULL, Jsave = NULL;
2570 
2571     if (istranspose) {
2572       PetscCall(MatCreateTranspose(jacobian, &JT));
2573       Jsave    = jacobian;
2574       jacobian = JT;
2575     }
2576     PetscCall(PetscObjectBaseTypeCompareAny((PetscObject)jacobian, &flg, MATSEQAIJ, MATMPIAIJ, MATSEQDENSE, MATMPIDENSE, MATSEQBAIJ, MATMPIBAIJ, MATSEQSBAIJ, MATMPISBAIJ, ""));
2577     if (flg) {
2578       A = jacobian;
2579       PetscCall(PetscObjectReference((PetscObject)A));
2580     } else {
2581       PetscCall(MatComputeOperator(jacobian, MATAIJ, &A));
2582     }
2583 
2584     PetscCall(MatGetType(A, &mattype));
2585     PetscCall(MatGetSize(A, &M, &N));
2586     PetscCall(MatGetLocalSize(A, &m, &n));
2587     PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B));
2588     PetscCall(MatSetType(B, mattype));
2589     PetscCall(MatSetSizes(B, m, n, M, N));
2590     PetscCall(MatSetBlockSizesFromMats(B, A, A));
2591     PetscCall(MatSetUp(B));
2592     PetscCall(MatSetOption(B, MAT_NEW_NONZERO_ALLOCATION_ERR, PETSC_FALSE));
2593 
2594     PetscCall(SNESGetFunction(snes, NULL, NULL, &functx));
2595     PetscCall(SNESComputeJacobianDefault(snes, x, B, B, functx));
2596 
2597     PetscCall(MatDuplicate(B, MAT_COPY_VALUES, &D));
2598     PetscCall(MatAYPX(D, -1.0, A, DIFFERENT_NONZERO_PATTERN));
2599     PetscCall(MatNorm(D, NORM_FROBENIUS, &nrm));
2600     PetscCall(MatNorm(A, NORM_FROBENIUS, &gnorm));
2601     PetscCall(MatDestroy(&D));
2602     if (!gnorm) gnorm = 1; /* just in case */
2603     PetscCall(PetscViewerASCIIPrintf(viewer, "  ||J - Jfd||_F/||J||_F = %g, ||J - Jfd||_F = %g\n", (double)(nrm / gnorm), (double)nrm));
2604 
2605     if (complete_print) {
2606       PetscCall(PetscViewerASCIIPrintf(viewer, "  Hand-coded Jacobian ----------\n"));
2607       PetscCall(MatView(A, mviewer));
2608       PetscCall(PetscViewerASCIIPrintf(viewer, "  Finite difference Jacobian ----------\n"));
2609       PetscCall(MatView(B, mviewer));
2610     }
2611 
2612     if (threshold_print || complete_print) {
2613       PetscInt           Istart, Iend, *ccols, bncols, cncols, j, row;
2614       PetscScalar       *cvals;
2615       const PetscInt    *bcols;
2616       const PetscScalar *bvals;
2617 
2618       PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &C));
2619       PetscCall(MatSetType(C, mattype));
2620       PetscCall(MatSetSizes(C, m, n, M, N));
2621       PetscCall(MatSetBlockSizesFromMats(C, A, A));
2622       PetscCall(MatSetUp(C));
2623       PetscCall(MatSetOption(C, MAT_NEW_NONZERO_ALLOCATION_ERR, PETSC_FALSE));
2624 
2625       PetscCall(MatAYPX(B, -1.0, A, DIFFERENT_NONZERO_PATTERN));
2626       PetscCall(MatGetOwnershipRange(B, &Istart, &Iend));
2627 
2628       for (row = Istart; row < Iend; row++) {
2629         PetscCall(MatGetRow(B, row, &bncols, &bcols, &bvals));
2630         PetscCall(PetscMalloc2(bncols, &ccols, bncols, &cvals));
2631         for (j = 0, cncols = 0; j < bncols; j++) {
2632           if (PetscAbsScalar(bvals[j]) > threshold) {
2633             ccols[cncols] = bcols[j];
2634             cvals[cncols] = bvals[j];
2635             cncols += 1;
2636           }
2637         }
2638         if (cncols) PetscCall(MatSetValues(C, 1, &row, cncols, ccols, cvals, INSERT_VALUES));
2639         PetscCall(MatRestoreRow(B, row, &bncols, &bcols, &bvals));
2640         PetscCall(PetscFree2(ccols, cvals));
2641       }
2642       PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY));
2643       PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY));
2644       PetscCall(PetscViewerASCIIPrintf(viewer, "  Hand-coded minus finite-difference Jacobian with tolerance %g ----------\n", (double)threshold));
2645       PetscCall(MatView(C, complete_print ? mviewer : viewer));
2646       PetscCall(MatDestroy(&C));
2647     }
2648     PetscCall(MatDestroy(&A));
2649     PetscCall(MatDestroy(&B));
2650     PetscCall(MatDestroy(&JT));
2651     if (Jsave) jacobian = Jsave;
2652     if (jacobian != snes->jacobian_pre) {
2653       jacobian = snes->jacobian_pre;
2654       PetscCall(PetscViewerASCIIPrintf(viewer, "  ---------- Testing Jacobian for preconditioner -------------\n"));
2655     } else jacobian = NULL;
2656   }
2657   PetscCall(VecDestroy(&x));
2658   if (complete_print) PetscCall(PetscViewerPopFormat(mviewer));
2659   if (mviewer) PetscCall(PetscViewerDestroy(&mviewer));
2660   PetscCall(PetscViewerASCIISetTab(viewer, tabs));
2661   PetscFunctionReturn(PETSC_SUCCESS);
2662 }
2663 
2664 /*@
2665    SNESComputeJacobian - Computes the Jacobian matrix that has been set with `SNESSetJacobian()`.
2666 
2667    Collective
2668 
2669    Input Parameters:
2670 +  snes - the `SNES` context
2671 -  x - input vector
2672 
2673    Output Parameters:
2674 +  A - Jacobian matrix
2675 -  B - optional matrix for building the preconditioner
2676 
2677   Options Database Keys:
2678 +    -snes_lag_preconditioner <lag> - how often to rebuild preconditioner
2679 .    -snes_lag_jacobian <lag> - how often to rebuild Jacobian
2680 .    -snes_test_jacobian <optional threshold> - compare the user provided Jacobian with one compute via finite differences to check for errors.  If a threshold is given, display only those entries whose difference is greater than the threshold.
2681 .    -snes_test_jacobian_view - display the user provided Jacobian, the finite difference Jacobian and the difference between them to help users detect the location of errors in the user provided Jacobian
2682 .    -snes_compare_explicit - Compare the computed Jacobian to the finite difference Jacobian and output the differences
2683 .    -snes_compare_explicit_draw  - Compare the computed Jacobian to the finite difference Jacobian and draw the result
2684 .    -snes_compare_explicit_contour  - Compare the computed Jacobian to the finite difference Jacobian and draw a contour plot with the result
2685 .    -snes_compare_operator  - Make the comparison options above use the operator instead of the preconditioning matrix
2686 .    -snes_compare_coloring - Compute the finite difference Jacobian using coloring and display norms of difference
2687 .    -snes_compare_coloring_display - Compute the finite difference Jacobian using coloring and display verbose differences
2688 .    -snes_compare_coloring_threshold - Display only those matrix entries that differ by more than a given threshold
2689 .    -snes_compare_coloring_threshold_atol - Absolute tolerance for difference in matrix entries to be displayed by `-snes_compare_coloring_threshold`
2690 .    -snes_compare_coloring_threshold_rtol - Relative tolerance for difference in matrix entries to be displayed by `-snes_compare_coloring_threshold`
2691 .    -snes_compare_coloring_draw - Compute the finite difference Jacobian using coloring and draw differences
2692 -    -snes_compare_coloring_draw_contour - Compute the finite difference Jacobian using coloring and show contours of matrices and differences
2693 
2694    Level: developer
2695 
2696    Note:
2697    Most users should not need to explicitly call this routine, as it
2698    is used internally within the nonlinear solvers.
2699 
2700    Developer Note:
2701     This has duplicative ways of checking the accuracy of the user provided Jacobian (see the options above). This is for historical reasons, the routine `SNESTestJacobian()` use to used
2702       for with the `SNESType` of test that has been removed.
2703 
2704 .seealso: [](ch_snes), `SNESSetJacobian()`, `KSPSetOperators()`, `MatStructure`, `SNESSetLagPreconditioner()`, `SNESSetLagJacobian()`
2705 @*/
2706 PetscErrorCode SNESComputeJacobian(SNES snes, Vec X, Mat A, Mat B)
2707 {
2708   PetscBool flag;
2709   DM        dm;
2710   DMSNES    sdm;
2711   KSP       ksp;
2712 
2713   PetscFunctionBegin;
2714   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
2715   PetscValidHeaderSpecific(X, VEC_CLASSID, 2);
2716   PetscCheckSameComm(snes, 1, X, 2);
2717   PetscCall(VecValidValues_Internal(X, 2, PETSC_TRUE));
2718   PetscCall(SNESGetDM(snes, &dm));
2719   PetscCall(DMGetDMSNES(dm, &sdm));
2720 
2721   /* make sure that MatAssemblyBegin/End() is called on A matrix if it is matrix free */
2722   if (snes->lagjacobian == -2) {
2723     snes->lagjacobian = -1;
2724 
2725     PetscCall(PetscInfo(snes, "Recomputing Jacobian/preconditioner because lag is -2 (means compute Jacobian, but then never again) \n"));
2726   } else if (snes->lagjacobian == -1) {
2727     PetscCall(PetscInfo(snes, "Reusing Jacobian/preconditioner because lag is -1\n"));
2728     PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMFFD, &flag));
2729     if (flag) {
2730       PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY));
2731       PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY));
2732     }
2733     PetscFunctionReturn(PETSC_SUCCESS);
2734   } else if (snes->lagjacobian > 1 && (snes->iter + snes->jac_iter) % snes->lagjacobian) {
2735     PetscCall(PetscInfo(snes, "Reusing Jacobian/preconditioner because lag is %" PetscInt_FMT " and SNES iteration is %" PetscInt_FMT "\n", snes->lagjacobian, snes->iter));
2736     PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMFFD, &flag));
2737     if (flag) {
2738       PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY));
2739       PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY));
2740     }
2741     PetscFunctionReturn(PETSC_SUCCESS);
2742   }
2743   if (snes->npc && snes->npcside == PC_LEFT) {
2744     PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY));
2745     PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY));
2746     PetscFunctionReturn(PETSC_SUCCESS);
2747   }
2748 
2749   PetscCall(PetscLogEventBegin(SNES_JacobianEval, snes, X, A, B));
2750   PetscCall(VecLockReadPush(X));
2751   {
2752     void *ctx;
2753     PetscErrorCode (*J)(SNES, Vec, Mat, Mat, void *);
2754     PetscCall(DMSNESGetJacobian(dm, &J, &ctx));
2755     PetscCallBack("SNES callback Jacobian", (*J)(snes, X, A, B, ctx));
2756   }
2757   PetscCall(VecLockReadPop(X));
2758   PetscCall(PetscLogEventEnd(SNES_JacobianEval, snes, X, A, B));
2759 
2760   /* attach latest linearization point to the preconditioning matrix */
2761   PetscCall(PetscObjectCompose((PetscObject)B, "__SNES_latest_X", (PetscObject)X));
2762 
2763   /* the next line ensures that snes->ksp exists */
2764   PetscCall(SNESGetKSP(snes, &ksp));
2765   if (snes->lagpreconditioner == -2) {
2766     PetscCall(PetscInfo(snes, "Rebuilding preconditioner exactly once since lag is -2\n"));
2767     PetscCall(KSPSetReusePreconditioner(snes->ksp, PETSC_FALSE));
2768     snes->lagpreconditioner = -1;
2769   } else if (snes->lagpreconditioner == -1) {
2770     PetscCall(PetscInfo(snes, "Reusing preconditioner because lag is -1\n"));
2771     PetscCall(KSPSetReusePreconditioner(snes->ksp, PETSC_TRUE));
2772   } else if (snes->lagpreconditioner > 1 && (snes->iter + snes->pre_iter) % snes->lagpreconditioner) {
2773     PetscCall(PetscInfo(snes, "Reusing preconditioner because lag is %" PetscInt_FMT " and SNES iteration is %" PetscInt_FMT "\n", snes->lagpreconditioner, snes->iter));
2774     PetscCall(KSPSetReusePreconditioner(snes->ksp, PETSC_TRUE));
2775   } else {
2776     PetscCall(PetscInfo(snes, "Rebuilding preconditioner\n"));
2777     PetscCall(KSPSetReusePreconditioner(snes->ksp, PETSC_FALSE));
2778   }
2779 
2780   PetscCall(SNESTestJacobian(snes));
2781   /* make sure user returned a correct Jacobian and preconditioner */
2782   /* PetscValidHeaderSpecific(A,MAT_CLASSID,3);
2783     PetscValidHeaderSpecific(B,MAT_CLASSID,4);   */
2784   {
2785     PetscBool flag = PETSC_FALSE, flag_draw = PETSC_FALSE, flag_contour = PETSC_FALSE, flag_operator = PETSC_FALSE;
2786     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_explicit", NULL, NULL, &flag));
2787     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_explicit_draw", NULL, NULL, &flag_draw));
2788     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_explicit_draw_contour", NULL, NULL, &flag_contour));
2789     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_operator", NULL, NULL, &flag_operator));
2790     if (flag || flag_draw || flag_contour) {
2791       Mat         Bexp_mine = NULL, Bexp, FDexp;
2792       PetscViewer vdraw, vstdout;
2793       PetscBool   flg;
2794       if (flag_operator) {
2795         PetscCall(MatComputeOperator(A, MATAIJ, &Bexp_mine));
2796         Bexp = Bexp_mine;
2797       } else {
2798         /* See if the preconditioning matrix can be viewed and added directly */
2799         PetscCall(PetscObjectBaseTypeCompareAny((PetscObject)B, &flg, MATSEQAIJ, MATMPIAIJ, MATSEQDENSE, MATMPIDENSE, MATSEQBAIJ, MATMPIBAIJ, MATSEQSBAIJ, MATMPIBAIJ, ""));
2800         if (flg) Bexp = B;
2801         else {
2802           /* If the "preconditioning" matrix is itself MATSHELL or some other type without direct support */
2803           PetscCall(MatComputeOperator(B, MATAIJ, &Bexp_mine));
2804           Bexp = Bexp_mine;
2805         }
2806       }
2807       PetscCall(MatConvert(Bexp, MATSAME, MAT_INITIAL_MATRIX, &FDexp));
2808       PetscCall(SNESComputeJacobianDefault(snes, X, FDexp, FDexp, NULL));
2809       PetscCall(PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)snes), &vstdout));
2810       if (flag_draw || flag_contour) {
2811         PetscCall(PetscViewerDrawOpen(PetscObjectComm((PetscObject)snes), NULL, "Explicit Jacobians", PETSC_DECIDE, PETSC_DECIDE, 300, 300, &vdraw));
2812         if (flag_contour) PetscCall(PetscViewerPushFormat(vdraw, PETSC_VIEWER_DRAW_CONTOUR));
2813       } else vdraw = NULL;
2814       PetscCall(PetscViewerASCIIPrintf(vstdout, "Explicit %s\n", flag_operator ? "Jacobian" : "preconditioning Jacobian"));
2815       if (flag) PetscCall(MatView(Bexp, vstdout));
2816       if (vdraw) PetscCall(MatView(Bexp, vdraw));
2817       PetscCall(PetscViewerASCIIPrintf(vstdout, "Finite difference Jacobian\n"));
2818       if (flag) PetscCall(MatView(FDexp, vstdout));
2819       if (vdraw) PetscCall(MatView(FDexp, vdraw));
2820       PetscCall(MatAYPX(FDexp, -1.0, Bexp, SAME_NONZERO_PATTERN));
2821       PetscCall(PetscViewerASCIIPrintf(vstdout, "User-provided matrix minus finite difference Jacobian\n"));
2822       if (flag) PetscCall(MatView(FDexp, vstdout));
2823       if (vdraw) { /* Always use contour for the difference */
2824         PetscCall(PetscViewerPushFormat(vdraw, PETSC_VIEWER_DRAW_CONTOUR));
2825         PetscCall(MatView(FDexp, vdraw));
2826         PetscCall(PetscViewerPopFormat(vdraw));
2827       }
2828       if (flag_contour) PetscCall(PetscViewerPopFormat(vdraw));
2829       PetscCall(PetscViewerDestroy(&vdraw));
2830       PetscCall(MatDestroy(&Bexp_mine));
2831       PetscCall(MatDestroy(&FDexp));
2832     }
2833   }
2834   {
2835     PetscBool flag = PETSC_FALSE, flag_display = PETSC_FALSE, flag_draw = PETSC_FALSE, flag_contour = PETSC_FALSE, flag_threshold = PETSC_FALSE;
2836     PetscReal threshold_atol = PETSC_SQRT_MACHINE_EPSILON, threshold_rtol = 10 * PETSC_SQRT_MACHINE_EPSILON;
2837     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring", NULL, NULL, &flag));
2838     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring_display", NULL, NULL, &flag_display));
2839     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring_draw", NULL, NULL, &flag_draw));
2840     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring_draw_contour", NULL, NULL, &flag_contour));
2841     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring_threshold", NULL, NULL, &flag_threshold));
2842     if (flag_threshold) {
2843       PetscCall(PetscOptionsGetReal(((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring_threshold_rtol", &threshold_rtol, NULL));
2844       PetscCall(PetscOptionsGetReal(((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_compare_coloring_threshold_atol", &threshold_atol, NULL));
2845     }
2846     if (flag || flag_display || flag_draw || flag_contour || flag_threshold) {
2847       Mat           Bfd;
2848       PetscViewer   vdraw, vstdout;
2849       MatColoring   coloring;
2850       ISColoring    iscoloring;
2851       MatFDColoring matfdcoloring;
2852       PetscErrorCode (*func)(SNES, Vec, Vec, void *);
2853       void     *funcctx;
2854       PetscReal norm1, norm2, normmax;
2855 
2856       PetscCall(MatDuplicate(B, MAT_DO_NOT_COPY_VALUES, &Bfd));
2857       PetscCall(MatColoringCreate(Bfd, &coloring));
2858       PetscCall(MatColoringSetType(coloring, MATCOLORINGSL));
2859       PetscCall(MatColoringSetFromOptions(coloring));
2860       PetscCall(MatColoringApply(coloring, &iscoloring));
2861       PetscCall(MatColoringDestroy(&coloring));
2862       PetscCall(MatFDColoringCreate(Bfd, iscoloring, &matfdcoloring));
2863       PetscCall(MatFDColoringSetFromOptions(matfdcoloring));
2864       PetscCall(MatFDColoringSetUp(Bfd, iscoloring, matfdcoloring));
2865       PetscCall(ISColoringDestroy(&iscoloring));
2866 
2867       /* This method of getting the function is currently unreliable since it doesn't work for DM local functions. */
2868       PetscCall(SNESGetFunction(snes, NULL, &func, &funcctx));
2869       PetscCall(MatFDColoringSetFunction(matfdcoloring, (PetscErrorCode(*)(void))func, funcctx));
2870       PetscCall(PetscObjectSetOptionsPrefix((PetscObject)matfdcoloring, ((PetscObject)snes)->prefix));
2871       PetscCall(PetscObjectAppendOptionsPrefix((PetscObject)matfdcoloring, "coloring_"));
2872       PetscCall(MatFDColoringSetFromOptions(matfdcoloring));
2873       PetscCall(MatFDColoringApply(Bfd, matfdcoloring, X, snes));
2874       PetscCall(MatFDColoringDestroy(&matfdcoloring));
2875 
2876       PetscCall(PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)snes), &vstdout));
2877       if (flag_draw || flag_contour) {
2878         PetscCall(PetscViewerDrawOpen(PetscObjectComm((PetscObject)snes), NULL, "Colored Jacobians", PETSC_DECIDE, PETSC_DECIDE, 300, 300, &vdraw));
2879         if (flag_contour) PetscCall(PetscViewerPushFormat(vdraw, PETSC_VIEWER_DRAW_CONTOUR));
2880       } else vdraw = NULL;
2881       PetscCall(PetscViewerASCIIPrintf(vstdout, "Explicit preconditioning Jacobian\n"));
2882       if (flag_display) PetscCall(MatView(B, vstdout));
2883       if (vdraw) PetscCall(MatView(B, vdraw));
2884       PetscCall(PetscViewerASCIIPrintf(vstdout, "Colored Finite difference Jacobian\n"));
2885       if (flag_display) PetscCall(MatView(Bfd, vstdout));
2886       if (vdraw) PetscCall(MatView(Bfd, vdraw));
2887       PetscCall(MatAYPX(Bfd, -1.0, B, SAME_NONZERO_PATTERN));
2888       PetscCall(MatNorm(Bfd, NORM_1, &norm1));
2889       PetscCall(MatNorm(Bfd, NORM_FROBENIUS, &norm2));
2890       PetscCall(MatNorm(Bfd, NORM_MAX, &normmax));
2891       PetscCall(PetscViewerASCIIPrintf(vstdout, "User-provided matrix minus finite difference Jacobian, norm1=%g normFrob=%g normmax=%g\n", (double)norm1, (double)norm2, (double)normmax));
2892       if (flag_display) PetscCall(MatView(Bfd, vstdout));
2893       if (vdraw) { /* Always use contour for the difference */
2894         PetscCall(PetscViewerPushFormat(vdraw, PETSC_VIEWER_DRAW_CONTOUR));
2895         PetscCall(MatView(Bfd, vdraw));
2896         PetscCall(PetscViewerPopFormat(vdraw));
2897       }
2898       if (flag_contour) PetscCall(PetscViewerPopFormat(vdraw));
2899 
2900       if (flag_threshold) {
2901         PetscInt bs, rstart, rend, i;
2902         PetscCall(MatGetBlockSize(B, &bs));
2903         PetscCall(MatGetOwnershipRange(B, &rstart, &rend));
2904         for (i = rstart; i < rend; i++) {
2905           const PetscScalar *ba, *ca;
2906           const PetscInt    *bj, *cj;
2907           PetscInt           bn, cn, j, maxentrycol = -1, maxdiffcol = -1, maxrdiffcol = -1;
2908           PetscReal          maxentry = 0, maxdiff = 0, maxrdiff = 0;
2909           PetscCall(MatGetRow(B, i, &bn, &bj, &ba));
2910           PetscCall(MatGetRow(Bfd, i, &cn, &cj, &ca));
2911           PetscCheck(bn == cn, ((PetscObject)A)->comm, PETSC_ERR_PLIB, "Unexpected different nonzero pattern in -snes_compare_coloring_threshold");
2912           for (j = 0; j < bn; j++) {
2913             PetscReal rdiff = PetscAbsScalar(ca[j]) / (threshold_atol + threshold_rtol * PetscAbsScalar(ba[j]));
2914             if (PetscAbsScalar(ba[j]) > PetscAbs(maxentry)) {
2915               maxentrycol = bj[j];
2916               maxentry    = PetscRealPart(ba[j]);
2917             }
2918             if (PetscAbsScalar(ca[j]) > PetscAbs(maxdiff)) {
2919               maxdiffcol = bj[j];
2920               maxdiff    = PetscRealPart(ca[j]);
2921             }
2922             if (rdiff > maxrdiff) {
2923               maxrdiffcol = bj[j];
2924               maxrdiff    = rdiff;
2925             }
2926           }
2927           if (maxrdiff > 1) {
2928             PetscCall(PetscViewerASCIIPrintf(vstdout, "row %" PetscInt_FMT " (maxentry=%g at %" PetscInt_FMT ", maxdiff=%g at %" PetscInt_FMT ", maxrdiff=%g at %" PetscInt_FMT "):", i, (double)maxentry, maxentrycol, (double)maxdiff, maxdiffcol, (double)maxrdiff, maxrdiffcol));
2929             for (j = 0; j < bn; j++) {
2930               PetscReal rdiff;
2931               rdiff = PetscAbsScalar(ca[j]) / (threshold_atol + threshold_rtol * PetscAbsScalar(ba[j]));
2932               if (rdiff > 1) PetscCall(PetscViewerASCIIPrintf(vstdout, " (%" PetscInt_FMT ",%g:%g)", bj[j], (double)PetscRealPart(ba[j]), (double)PetscRealPart(ca[j])));
2933             }
2934             PetscCall(PetscViewerASCIIPrintf(vstdout, "\n"));
2935           }
2936           PetscCall(MatRestoreRow(B, i, &bn, &bj, &ba));
2937           PetscCall(MatRestoreRow(Bfd, i, &cn, &cj, &ca));
2938         }
2939       }
2940       PetscCall(PetscViewerDestroy(&vdraw));
2941       PetscCall(MatDestroy(&Bfd));
2942     }
2943   }
2944   PetscFunctionReturn(PETSC_SUCCESS);
2945 }
2946 
2947 /*MC
2948     SNESJacobianFunction - Function used by `SNES` to compute the nonlinear Jacobian of the function to be solved by `SNES`
2949 
2950      Synopsis:
2951      #include "petscsnes.h"
2952      PetscErrorCode SNESJacobianFunction(SNES snes,Vec x,Mat Amat,Mat Pmat,void *ctx);
2953 
2954      Collective
2955 
2956     Input Parameters:
2957 +  x - input vector, the Jacobian is to be computed at this value
2958 -  ctx - [optional] user-defined Jacobian context
2959 
2960     Output Parameters:
2961 +  Amat - the matrix that defines the (approximate) Jacobian
2962 -  Pmat - the matrix to be used in constructing the preconditioner, usually the same as `Amat`.
2963 
2964    Level: intermediate
2965 
2966 .seealso: [](ch_snes), `SNES`, `SNESSetFunction()`, `SNESGetFunction()`, `SNESSetJacobian()`, `SNESGetJacobian()`
2967 M*/
2968 
2969 /*@C
2970    SNESSetJacobian - Sets the function to compute Jacobian as well as the
2971    location to store the matrix.
2972 
2973    Logically Collective
2974 
2975    Input Parameters:
2976 +  snes - the `SNES` context
2977 .  Amat - the matrix that defines the (approximate) Jacobian
2978 .  Pmat - the matrix to be used in constructing the preconditioner, usually the same as `Amat`.
2979 .  J - Jacobian evaluation routine (if `NULL` then `SNES` retains any previously set value), see `SNESJacobianFunction` for details
2980 -  ctx - [optional] user-defined context for private data for the
2981          Jacobian evaluation routine (may be `NULL`) (if `NULL` then `SNES` retains any previously set value)
2982 
2983    Level: beginner
2984 
2985    Notes:
2986    If the `Amat` matrix and `Pmat` matrix are different you must call `MatAssemblyBegin()`/`MatAssemblyEnd()` on
2987    each matrix.
2988 
2989    If you know the operator `Amat` has a null space you can use `MatSetNullSpace()` and `MatSetTransposeNullSpace()` to supply the null
2990    space to `Amat` and the `KSP` solvers will automatically use that null space as needed during the solution process.
2991 
2992    If using `SNESComputeJacobianDefaultColor()` to assemble a Jacobian, the `ctx` argument
2993    must be a `MatFDColoring`.
2994 
2995    Other defect-correction schemes can be used by computing a different matrix in place of the Jacobian.  One common
2996    example is to use the "Picard linearization" which only differentiates through the highest order parts of each term using `SNESSetPicard()`
2997 
2998 .seealso: [](ch_snes), `SNES`, `KSPSetOperators()`, `SNESSetFunction()`, `MatMFFDComputeJacobian()`, `SNESComputeJacobianDefaultColor()`, `MatStructure`,
2999           `SNESSetPicard()`, `SNESJacobianFunction`
3000 @*/
3001 PetscErrorCode SNESSetJacobian(SNES snes, Mat Amat, Mat Pmat, PetscErrorCode (*J)(SNES, Vec, Mat, Mat, void *), void *ctx)
3002 {
3003   DM dm;
3004 
3005   PetscFunctionBegin;
3006   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3007   if (Amat) PetscValidHeaderSpecific(Amat, MAT_CLASSID, 2);
3008   if (Pmat) PetscValidHeaderSpecific(Pmat, MAT_CLASSID, 3);
3009   if (Amat) PetscCheckSameComm(snes, 1, Amat, 2);
3010   if (Pmat) PetscCheckSameComm(snes, 1, Pmat, 3);
3011   PetscCall(SNESGetDM(snes, &dm));
3012   PetscCall(DMSNESSetJacobian(dm, J, ctx));
3013   if (Amat) {
3014     PetscCall(PetscObjectReference((PetscObject)Amat));
3015     PetscCall(MatDestroy(&snes->jacobian));
3016 
3017     snes->jacobian = Amat;
3018   }
3019   if (Pmat) {
3020     PetscCall(PetscObjectReference((PetscObject)Pmat));
3021     PetscCall(MatDestroy(&snes->jacobian_pre));
3022 
3023     snes->jacobian_pre = Pmat;
3024   }
3025   PetscFunctionReturn(PETSC_SUCCESS);
3026 }
3027 
3028 /*@C
3029    SNESGetJacobian - Returns the Jacobian matrix and optionally the user
3030    provided context for evaluating the Jacobian.
3031 
3032    Not Collective, but `Mat` object will be parallel if `SNES` object is
3033 
3034    Input Parameter:
3035 .  snes - the nonlinear solver context
3036 
3037    Output Parameters:
3038 +  Amat - location to stash (approximate) Jacobian matrix (or `NULL`)
3039 .  Pmat - location to stash matrix used to compute the preconditioner (or `NULL`)
3040 .  J - location to put Jacobian function (or `NULL`), for calling sequence see `SNESJacobianFunction`
3041 -  ctx - location to stash Jacobian ctx (or `NULL`)
3042 
3043    Level: advanced
3044 
3045 .seealso: [](ch_snes), `SNES`, `Mat`, `SNESSetJacobian()`, `SNESComputeJacobian()`, `SNESJacobianFunction`, `SNESGetFunction()`
3046 @*/
3047 PetscErrorCode SNESGetJacobian(SNES snes, Mat *Amat, Mat *Pmat, PetscErrorCode (**J)(SNES, Vec, Mat, Mat, void *), void **ctx)
3048 {
3049   DM dm;
3050 
3051   PetscFunctionBegin;
3052   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3053   if (Amat) *Amat = snes->jacobian;
3054   if (Pmat) *Pmat = snes->jacobian_pre;
3055   PetscCall(SNESGetDM(snes, &dm));
3056   PetscCall(DMSNESGetJacobian(dm, J, ctx));
3057   PetscFunctionReturn(PETSC_SUCCESS);
3058 }
3059 
3060 static PetscErrorCode SNESSetDefaultComputeJacobian(SNES snes)
3061 {
3062   DM     dm;
3063   DMSNES sdm;
3064 
3065   PetscFunctionBegin;
3066   PetscCall(SNESGetDM(snes, &dm));
3067   PetscCall(DMGetDMSNES(dm, &sdm));
3068   if (!sdm->ops->computejacobian && snes->jacobian_pre) {
3069     DM        dm;
3070     PetscBool isdense, ismf;
3071 
3072     PetscCall(SNESGetDM(snes, &dm));
3073     PetscCall(PetscObjectTypeCompareAny((PetscObject)snes->jacobian_pre, &isdense, MATSEQDENSE, MATMPIDENSE, MATDENSE, NULL));
3074     PetscCall(PetscObjectTypeCompareAny((PetscObject)snes->jacobian_pre, &ismf, MATMFFD, MATSHELL, NULL));
3075     if (isdense) {
3076       PetscCall(DMSNESSetJacobian(dm, SNESComputeJacobianDefault, NULL));
3077     } else if (!ismf) {
3078       PetscCall(DMSNESSetJacobian(dm, SNESComputeJacobianDefaultColor, NULL));
3079     }
3080   }
3081   PetscFunctionReturn(PETSC_SUCCESS);
3082 }
3083 
3084 /*@
3085    SNESSetUp - Sets up the internal data structures for the later use
3086    of a nonlinear solver.
3087 
3088    Collective
3089 
3090    Input Parameter:
3091 .  snes - the `SNES` context
3092 
3093    Level: advanced
3094 
3095    Note:
3096    For basic use of the `SNES` solvers the user need not explicitly call
3097    `SNESSetUp()`, since these actions will automatically occur during
3098    the call to `SNESSolve()`.  However, if one wishes to control this
3099    phase separately, `SNESSetUp()` should be called after `SNESCreate()`
3100    and optional routines of the form SNESSetXXX(), but before `SNESSolve()`.
3101 
3102 .seealso: [](ch_snes), `SNES`, `SNESCreate()`, `SNESSolve()`, `SNESDestroy()`
3103 @*/
3104 PetscErrorCode SNESSetUp(SNES snes)
3105 {
3106   DM             dm;
3107   DMSNES         sdm;
3108   SNESLineSearch linesearch, pclinesearch;
3109   void          *lsprectx, *lspostctx;
3110   PetscBool      mf_operator, mf;
3111   Vec            f, fpc;
3112   void          *funcctx;
3113   void          *jacctx, *appctx;
3114   Mat            j, jpre;
3115   PetscErrorCode (*precheck)(SNESLineSearch, Vec, Vec, PetscBool *, void *);
3116   PetscErrorCode (*postcheck)(SNESLineSearch, Vec, Vec, Vec, PetscBool *, PetscBool *, void *);
3117   PetscErrorCode (*func)(SNES, Vec, Vec, void *);
3118   PetscErrorCode (*jac)(SNES, Vec, Mat, Mat, void *);
3119 
3120   PetscFunctionBegin;
3121   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3122   if (snes->setupcalled) PetscFunctionReturn(PETSC_SUCCESS);
3123   PetscCall(PetscLogEventBegin(SNES_SetUp, snes, 0, 0, 0));
3124 
3125   if (!((PetscObject)snes)->type_name) PetscCall(SNESSetType(snes, SNESNEWTONLS));
3126 
3127   PetscCall(SNESGetFunction(snes, &snes->vec_func, NULL, NULL));
3128 
3129   PetscCall(SNESGetDM(snes, &dm));
3130   PetscCall(DMGetDMSNES(dm, &sdm));
3131   PetscCall(SNESSetDefaultComputeJacobian(snes));
3132 
3133   if (!snes->vec_func) PetscCall(DMCreateGlobalVector(dm, &snes->vec_func));
3134 
3135   if (!snes->ksp) PetscCall(SNESGetKSP(snes, &snes->ksp));
3136 
3137   if (snes->linesearch) {
3138     PetscCall(SNESGetLineSearch(snes, &snes->linesearch));
3139     PetscCall(SNESLineSearchSetFunction(snes->linesearch, SNESComputeFunction));
3140   }
3141 
3142   PetscCall(SNESGetUseMatrixFree(snes, &mf_operator, &mf));
3143   if (snes->npc && snes->npcside == PC_LEFT) {
3144     snes->mf          = PETSC_TRUE;
3145     snes->mf_operator = PETSC_FALSE;
3146   }
3147 
3148   if (snes->npc) {
3149     /* copy the DM over */
3150     PetscCall(SNESGetDM(snes, &dm));
3151     PetscCall(SNESSetDM(snes->npc, dm));
3152 
3153     PetscCall(SNESGetFunction(snes, &f, &func, &funcctx));
3154     PetscCall(VecDuplicate(f, &fpc));
3155     PetscCall(SNESSetFunction(snes->npc, fpc, func, funcctx));
3156     PetscCall(SNESGetJacobian(snes, &j, &jpre, &jac, &jacctx));
3157     PetscCall(SNESSetJacobian(snes->npc, j, jpre, jac, jacctx));
3158     PetscCall(SNESGetApplicationContext(snes, &appctx));
3159     PetscCall(SNESSetApplicationContext(snes->npc, appctx));
3160     PetscCall(SNESSetUseMatrixFree(snes->npc, mf_operator, mf));
3161     PetscCall(VecDestroy(&fpc));
3162 
3163     /* copy the function pointers over */
3164     PetscCall(PetscObjectCopyFortranFunctionPointers((PetscObject)snes, (PetscObject)snes->npc));
3165 
3166     /* default to 1 iteration */
3167     PetscCall(SNESSetTolerances(snes->npc, 0.0, 0.0, 0.0, 1, snes->npc->max_funcs));
3168     if (snes->npcside == PC_RIGHT) {
3169       PetscCall(SNESSetNormSchedule(snes->npc, SNES_NORM_FINAL_ONLY));
3170     } else {
3171       PetscCall(SNESSetNormSchedule(snes->npc, SNES_NORM_NONE));
3172     }
3173     PetscCall(SNESSetFromOptions(snes->npc));
3174 
3175     /* copy the line search context over */
3176     if (snes->linesearch && snes->npc->linesearch) {
3177       PetscCall(SNESGetLineSearch(snes, &linesearch));
3178       PetscCall(SNESGetLineSearch(snes->npc, &pclinesearch));
3179       PetscCall(SNESLineSearchGetPreCheck(linesearch, &precheck, &lsprectx));
3180       PetscCall(SNESLineSearchGetPostCheck(linesearch, &postcheck, &lspostctx));
3181       PetscCall(SNESLineSearchSetPreCheck(pclinesearch, precheck, lsprectx));
3182       PetscCall(SNESLineSearchSetPostCheck(pclinesearch, postcheck, lspostctx));
3183       PetscCall(PetscObjectCopyFortranFunctionPointers((PetscObject)linesearch, (PetscObject)pclinesearch));
3184     }
3185   }
3186   if (snes->mf) PetscCall(SNESSetUpMatrixFree_Private(snes, snes->mf_operator, snes->mf_version));
3187   if (snes->ops->usercompute && !snes->user) PetscCall((*snes->ops->usercompute)(snes, (void **)&snes->user));
3188 
3189   snes->jac_iter = 0;
3190   snes->pre_iter = 0;
3191 
3192   PetscTryTypeMethod(snes, setup);
3193 
3194   PetscCall(SNESSetDefaultComputeJacobian(snes));
3195 
3196   if (snes->npc && snes->npcside == PC_LEFT) {
3197     if (snes->functype == SNES_FUNCTION_PRECONDITIONED) {
3198       if (snes->linesearch) {
3199         PetscCall(SNESGetLineSearch(snes, &linesearch));
3200         PetscCall(SNESLineSearchSetFunction(linesearch, SNESComputeFunctionDefaultNPC));
3201       }
3202     }
3203   }
3204   PetscCall(PetscLogEventEnd(SNES_SetUp, snes, 0, 0, 0));
3205   snes->setupcalled = PETSC_TRUE;
3206   PetscFunctionReturn(PETSC_SUCCESS);
3207 }
3208 
3209 /*@
3210    SNESReset - Resets a `SNES` context to the snessetupcalled = 0 state and removes any allocated `Vec`s and `Mat`s
3211 
3212    Collective
3213 
3214    Input Parameter:
3215 .  snes - iterative context obtained from `SNESCreate()`
3216 
3217    Level: intermediate
3218 
3219    Notes:
3220    Call this if you wish to reuse a `SNES` but with different size vectors
3221 
3222    Also calls the application context destroy routine set with `SNESSetComputeApplicationContext()`
3223 
3224 .seealso: [](ch_snes), `SNES`, `SNESDestroy()`, `SNESCreate()`, `SNESSetUp()`, `SNESSolve()`
3225 @*/
3226 PetscErrorCode SNESReset(SNES snes)
3227 {
3228   PetscFunctionBegin;
3229   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3230   if (snes->ops->userdestroy && snes->user) {
3231     PetscCall((*snes->ops->userdestroy)((void **)&snes->user));
3232     snes->user = NULL;
3233   }
3234   if (snes->npc) PetscCall(SNESReset(snes->npc));
3235 
3236   PetscTryTypeMethod(snes, reset);
3237   if (snes->ksp) PetscCall(KSPReset(snes->ksp));
3238 
3239   if (snes->linesearch) PetscCall(SNESLineSearchReset(snes->linesearch));
3240 
3241   PetscCall(VecDestroy(&snes->vec_rhs));
3242   PetscCall(VecDestroy(&snes->vec_sol));
3243   PetscCall(VecDestroy(&snes->vec_sol_update));
3244   PetscCall(VecDestroy(&snes->vec_func));
3245   PetscCall(MatDestroy(&snes->jacobian));
3246   PetscCall(MatDestroy(&snes->jacobian_pre));
3247   PetscCall(MatDestroy(&snes->picard));
3248   PetscCall(VecDestroyVecs(snes->nwork, &snes->work));
3249   PetscCall(VecDestroyVecs(snes->nvwork, &snes->vwork));
3250 
3251   snes->alwayscomputesfinalresidual = PETSC_FALSE;
3252 
3253   snes->nwork = snes->nvwork = 0;
3254   snes->setupcalled          = PETSC_FALSE;
3255   PetscFunctionReturn(PETSC_SUCCESS);
3256 }
3257 
3258 /*@
3259    SNESConvergedReasonViewCancel - Clears all the reason view functions for a `SNES` object.
3260 
3261    Collective
3262 
3263    Input Parameter:
3264 .  snes - iterative context obtained from `SNESCreate()`
3265 
3266    Level: intermediate
3267 
3268 .seealso: [](ch_snes), `SNES`, `SNESCreate()`, `SNESDestroy()`, `SNESReset()`
3269 @*/
3270 PetscErrorCode SNESConvergedReasonViewCancel(SNES snes)
3271 {
3272   PetscInt i;
3273 
3274   PetscFunctionBegin;
3275   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3276   for (i = 0; i < snes->numberreasonviews; i++) {
3277     if (snes->reasonviewdestroy[i]) PetscCall((*snes->reasonviewdestroy[i])(&snes->reasonviewcontext[i]));
3278   }
3279   snes->numberreasonviews = 0;
3280   PetscFunctionReturn(PETSC_SUCCESS);
3281 }
3282 
3283 /*@C
3284    SNESDestroy - Destroys the nonlinear solver context that was created
3285    with `SNESCreate()`.
3286 
3287    Collective
3288 
3289    Input Parameter:
3290 .  snes - the `SNES` context
3291 
3292    Level: beginner
3293 
3294 .seealso: [](ch_snes), `SNES`, `SNESCreate()`, `SNESSolve()`
3295 @*/
3296 PetscErrorCode SNESDestroy(SNES *snes)
3297 {
3298   PetscFunctionBegin;
3299   if (!*snes) PetscFunctionReturn(PETSC_SUCCESS);
3300   PetscValidHeaderSpecific((*snes), SNES_CLASSID, 1);
3301   if (--((PetscObject)(*snes))->refct > 0) {
3302     *snes = NULL;
3303     PetscFunctionReturn(PETSC_SUCCESS);
3304   }
3305 
3306   PetscCall(SNESReset((*snes)));
3307   PetscCall(SNESDestroy(&(*snes)->npc));
3308 
3309   /* if memory was published with SAWs then destroy it */
3310   PetscCall(PetscObjectSAWsViewOff((PetscObject)*snes));
3311   PetscTryTypeMethod((*snes), destroy);
3312 
3313   if ((*snes)->dm) PetscCall(DMCoarsenHookRemove((*snes)->dm, DMCoarsenHook_SNESVecSol, DMRestrictHook_SNESVecSol, *snes));
3314   PetscCall(DMDestroy(&(*snes)->dm));
3315   PetscCall(KSPDestroy(&(*snes)->ksp));
3316   PetscCall(SNESLineSearchDestroy(&(*snes)->linesearch));
3317 
3318   PetscCall(PetscFree((*snes)->kspconvctx));
3319   if ((*snes)->ops->convergeddestroy) PetscCall((*(*snes)->ops->convergeddestroy)((*snes)->cnvP));
3320   if ((*snes)->conv_hist_alloc) PetscCall(PetscFree2((*snes)->conv_hist, (*snes)->conv_hist_its));
3321   PetscCall(SNESMonitorCancel((*snes)));
3322   PetscCall(SNESConvergedReasonViewCancel((*snes)));
3323   PetscCall(PetscHeaderDestroy(snes));
3324   PetscFunctionReturn(PETSC_SUCCESS);
3325 }
3326 
3327 /* ----------- Routines to set solver parameters ---------- */
3328 
3329 /*@
3330    SNESSetLagPreconditioner - Determines when the preconditioner is rebuilt in the nonlinear solve.
3331 
3332    Logically Collective
3333 
3334    Input Parameters:
3335 +  snes - the `SNES` context
3336 -  lag - 1 means rebuild every time the Jacobian is computed within a single nonlinear solve, 2 means every second time
3337          the Jacobian is built etc. -2 indicates rebuild preconditioner at next chance but then never rebuild after that
3338 
3339    Options Database Keys:
3340 +    -snes_lag_jacobian_persists <true,false> - sets the persistence through multiple SNES solves
3341 .    -snes_lag_jacobian <-2,1,2,...> - sets the lag
3342 .    -snes_lag_preconditioner_persists <true,false> - sets the persistence through multiple SNES solves
3343 -    -snes_lag_preconditioner <-2,1,2,...> - sets the lag
3344 
3345    Notes:
3346    Level: intermediate
3347 
3348    The default is 1
3349    The preconditioner is ALWAYS built in the first iteration of a nonlinear solve unless lag is -1 or `SNESSetLagPreconditionerPersists()` was called
3350 
3351    `SNESSetLagPreconditionerPersists()` allows using the same uniform lagging (for example every second linear solve) across multiple nonlinear solves.
3352 
3353 .seealso: [](ch_snes), `SNESSetTrustRegionTolerance()`, `SNESGetLagPreconditioner()`, `SNESSetLagJacobian()`, `SNESGetLagJacobian()`, `SNESSetLagPreconditionerPersists()`,
3354           `SNESSetLagJacobianPersists()`, `SNES`, `SNESSolve()`
3355 @*/
3356 PetscErrorCode SNESSetLagPreconditioner(SNES snes, PetscInt lag)
3357 {
3358   PetscFunctionBegin;
3359   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3360   PetscCheck(lag >= -2, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Lag must be -2, -1, 1 or greater");
3361   PetscCheck(lag, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Lag cannot be 0");
3362   PetscValidLogicalCollectiveInt(snes, lag, 2);
3363   snes->lagpreconditioner = lag;
3364   PetscFunctionReturn(PETSC_SUCCESS);
3365 }
3366 
3367 /*@
3368    SNESSetGridSequence - sets the number of steps of grid sequencing that `SNES` will do
3369 
3370    Logically Collective
3371 
3372    Input Parameters:
3373 +  snes - the `SNES` context
3374 -  steps - the number of refinements to do, defaults to 0
3375 
3376    Options Database Key:
3377 .    -snes_grid_sequence <steps> - Use grid sequencing to generate initial guess
3378 
3379    Level: intermediate
3380 
3381    Note:
3382    Use `SNESGetSolution()` to extract the fine grid solution after grid sequencing.
3383 
3384 .seealso: [](ch_snes), `SNES`, `SNESSetTrustRegionTolerance()`, `SNESGetLagPreconditioner()`, `SNESSetLagJacobian()`, `SNESGetLagJacobian()`, `SNESGetGridSequence()`
3385 @*/
3386 PetscErrorCode SNESSetGridSequence(SNES snes, PetscInt steps)
3387 {
3388   PetscFunctionBegin;
3389   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3390   PetscValidLogicalCollectiveInt(snes, steps, 2);
3391   snes->gridsequence = steps;
3392   PetscFunctionReturn(PETSC_SUCCESS);
3393 }
3394 
3395 /*@
3396    SNESGetGridSequence - gets the number of steps of grid sequencing that `SNES` will do
3397 
3398    Logically Collective
3399 
3400    Input Parameter:
3401 .  snes - the `SNES` context
3402 
3403    Output Parameter:
3404 .  steps - the number of refinements to do, defaults to 0
3405 
3406    Options Database Key:
3407 .    -snes_grid_sequence <steps> - set number of refinements
3408 
3409    Level: intermediate
3410 
3411    Note:
3412    Use `SNESGetSolution()` to extract the fine grid solution after grid sequencing.
3413 
3414 .seealso: [](ch_snes), `SNESSetTrustRegionTolerance()`, `SNESGetLagPreconditioner()`, `SNESSetLagJacobian()`, `SNESGetLagJacobian()`, `SNESSetGridSequence()`
3415 @*/
3416 PetscErrorCode SNESGetGridSequence(SNES snes, PetscInt *steps)
3417 {
3418   PetscFunctionBegin;
3419   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3420   *steps = snes->gridsequence;
3421   PetscFunctionReturn(PETSC_SUCCESS);
3422 }
3423 
3424 /*@
3425    SNESGetLagPreconditioner - Return how often the preconditioner is rebuilt
3426 
3427    Not Collective
3428 
3429    Input Parameter:
3430 .  snes - the `SNES` context
3431 
3432    Output Parameter:
3433 .   lag - -1 indicates NEVER rebuild, 1 means rebuild every time the Jacobian is computed within a single nonlinear solve, 2 means every second time
3434          the Jacobian is built etc. -2 indicates rebuild preconditioner at next chance but then never rebuild after that
3435 
3436    Options Database Keys:
3437 +    -snes_lag_jacobian_persists <true,false> - sets the persistence through multiple SNES solves
3438 .    -snes_lag_jacobian <-2,1,2,...> - sets the lag
3439 .    -snes_lag_preconditioner_persists <true,false> - sets the persistence through multiple SNES solves
3440 -    -snes_lag_preconditioner <-2,1,2,...> - sets the lag
3441 
3442    Level: intermediate
3443 
3444    Notes:
3445    The default is 1
3446 
3447    The preconditioner is ALWAYS built in the first iteration of a nonlinear solve unless lag is -1
3448 
3449 .seealso: [](ch_snes), `SNES`, `SNESSetTrustRegionTolerance()`, `SNESSetLagPreconditioner()`, `SNESSetLagJacobianPersists()`, `SNESSetLagPreconditionerPersists()`
3450 @*/
3451 PetscErrorCode SNESGetLagPreconditioner(SNES snes, PetscInt *lag)
3452 {
3453   PetscFunctionBegin;
3454   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3455   *lag = snes->lagpreconditioner;
3456   PetscFunctionReturn(PETSC_SUCCESS);
3457 }
3458 
3459 /*@
3460    SNESSetLagJacobian - Set when the Jacobian is rebuilt in the nonlinear solve. See `SNESSetLagPreconditioner()` for determining how
3461      often the preconditioner is rebuilt.
3462 
3463    Logically Collective
3464 
3465    Input Parameters:
3466 +  snes - the `SNES` context
3467 -  lag - -1 indicates NEVER rebuild, 1 means rebuild every time the Jacobian is computed within a single nonlinear solve, 2 means every second time
3468          the Jacobian is built etc. -2 means rebuild at next chance but then never again
3469 
3470    Options Database Keys:
3471 +    -snes_lag_jacobian_persists <true,false> - sets the persistence through multiple SNES solves
3472 .    -snes_lag_jacobian <-2,1,2,...> - sets the lag
3473 .    -snes_lag_preconditioner_persists <true,false> - sets the persistence through multiple SNES solves
3474 -    -snes_lag_preconditioner <-2,1,2,...> - sets the lag.
3475 
3476    Level: intermediate
3477 
3478    Notes:
3479    The default is 1
3480 
3481    The Jacobian is ALWAYS built in the first iteration of a nonlinear solve unless lag is -1
3482 
3483    If  -1 is used before the very first nonlinear solve the CODE WILL FAIL! because no Jacobian is used, use -2 to indicate you want it recomputed
3484    at the next Newton step but never again (unless it is reset to another value)
3485 
3486 .seealso: [](ch_snes), `SNES`, `SNESSetTrustRegionTolerance()`, `SNESGetLagPreconditioner()`, `SNESSetLagPreconditioner()`, `SNESGetLagJacobianPersists()`, `SNESSetLagPreconditionerPersists()`
3487 @*/
3488 PetscErrorCode SNESSetLagJacobian(SNES snes, PetscInt lag)
3489 {
3490   PetscFunctionBegin;
3491   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3492   PetscCheck(lag >= -2, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Lag must be -2, -1, 1 or greater");
3493   PetscCheck(lag, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Lag cannot be 0");
3494   PetscValidLogicalCollectiveInt(snes, lag, 2);
3495   snes->lagjacobian = lag;
3496   PetscFunctionReturn(PETSC_SUCCESS);
3497 }
3498 
3499 /*@
3500    SNESGetLagJacobian - Get how often the Jacobian is rebuilt. See `SNESGetLagPreconditioner()` to determine when the preconditioner is rebuilt
3501 
3502    Not Collective
3503 
3504    Input Parameter:
3505 .  snes - the `SNES` context
3506 
3507    Output Parameter:
3508 .   lag - -1 indicates NEVER rebuild, 1 means rebuild every time the Jacobian is computed within a single nonlinear solve, 2 means every second time
3509          the Jacobian is built etc.
3510 
3511    Level: intermediate
3512 
3513    Notes:
3514    The default is 1
3515 
3516    The jacobian is ALWAYS built in the first iteration of a nonlinear solve unless lag is -1 or `SNESSetLagJacobianPersists()` was called.
3517 
3518 .seealso: [](ch_snes), `SNES`, `SNESSetTrustRegionTolerance()`, `SNESSetLagJacobian()`, `SNESSetLagPreconditioner()`, `SNESGetLagPreconditioner()`, `SNESSetLagJacobianPersists()`, `SNESSetLagPreconditionerPersists()`
3519 
3520 @*/
3521 PetscErrorCode SNESGetLagJacobian(SNES snes, PetscInt *lag)
3522 {
3523   PetscFunctionBegin;
3524   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3525   *lag = snes->lagjacobian;
3526   PetscFunctionReturn(PETSC_SUCCESS);
3527 }
3528 
3529 /*@
3530    SNESSetLagJacobianPersists - Set whether or not the Jacobian lagging persists through multiple nonlinear solves
3531 
3532    Logically collective
3533 
3534    Input Parameters:
3535 +  snes - the `SNES` context
3536 -   flg - jacobian lagging persists if true
3537 
3538    Options Database Keys:
3539 +    -snes_lag_jacobian_persists <true,false> - sets the persistence through multiple SNES solves
3540 .    -snes_lag_jacobian <-2,1,2,...> - sets the lag
3541 .    -snes_lag_preconditioner_persists <true,false> - sets the persistence through multiple SNES solves
3542 -    -snes_lag_preconditioner <-2,1,2,...> - sets the lag
3543 
3544    Level: advanced
3545 
3546    Notes:
3547     Normally when `SNESSetLagJacobian()` is used, the Jacobian is always rebuilt at the beginning of each new nonlinear solve, this removes that.
3548 
3549     This is useful both for nonlinear preconditioning, where it's appropriate to have the Jacobian be stale by
3550    several solves, and for implicit time-stepping, where Jacobian lagging in the inner nonlinear solve over several
3551    timesteps may present huge efficiency gains.
3552 
3553 .seealso: [](ch_snes), `SNES, `SNESSetLagPreconditionerPersists()`, `SNESSetLagJacobian()`, `SNESGetLagJacobian()`, `SNESGetNPC()`, `SNESSetLagJacobianPersists()`
3554 @*/
3555 PetscErrorCode SNESSetLagJacobianPersists(SNES snes, PetscBool flg)
3556 {
3557   PetscFunctionBegin;
3558   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3559   PetscValidLogicalCollectiveBool(snes, flg, 2);
3560   snes->lagjac_persist = flg;
3561   PetscFunctionReturn(PETSC_SUCCESS);
3562 }
3563 
3564 /*@
3565    SNESSetLagPreconditionerPersists - Set whether or not the preconditioner lagging persists through multiple nonlinear solves
3566 
3567    Logically Collective
3568 
3569    Input Parameters:
3570 +  snes - the `SNES` context
3571 -   flg - preconditioner lagging persists if true
3572 
3573    Options Database Keys:
3574 +    -snes_lag_jacobian_persists <true,false> - sets the persistence through multiple SNES solves
3575 .    -snes_lag_jacobian <-2,1,2,...> - sets the lag
3576 .    -snes_lag_preconditioner_persists <true,false> - sets the persistence through multiple SNES solves
3577 -    -snes_lag_preconditioner <-2,1,2,...> - sets the lag
3578 
3579    Level: developer
3580 
3581    Notes:
3582     Normally when `SNESSetLagPreconditioner()` is used, the preconditioner is always rebuilt at the beginning of each new nonlinear solve, this removes that.
3583 
3584    This is useful both for nonlinear preconditioning, where it's appropriate to have the preconditioner be stale
3585    by several solves, and for implicit time-stepping, where preconditioner lagging in the inner nonlinear solve over
3586    several timesteps may present huge efficiency gains.
3587 
3588 .seealso: [](ch_snes), `SNES`, `SNESSetLagJacobianPersists()`, `SNESSetLagJacobian()`, `SNESGetLagJacobian()`, `SNESGetNPC()`, `SNESSetLagPreconditioner()`
3589 @*/
3590 PetscErrorCode SNESSetLagPreconditionerPersists(SNES snes, PetscBool flg)
3591 {
3592   PetscFunctionBegin;
3593   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3594   PetscValidLogicalCollectiveBool(snes, flg, 2);
3595   snes->lagpre_persist = flg;
3596   PetscFunctionReturn(PETSC_SUCCESS);
3597 }
3598 
3599 /*@
3600    SNESSetForceIteration - force `SNESSolve()` to take at least one iteration regardless of the initial residual norm
3601 
3602    Logically Collective
3603 
3604    Input Parameters:
3605 +  snes - the `SNES` context
3606 -  force - `PETSC_TRUE` require at least one iteration
3607 
3608    Options Database Key:
3609 .    -snes_force_iteration <force> - Sets forcing an iteration
3610 
3611    Level: intermediate
3612 
3613    Note:
3614    This is used sometimes with `TS` to prevent `TS` from detecting a false steady state solution
3615 
3616 .seealso: [](ch_snes), `SNES`, `TS`, `SNESSetTrustRegionTolerance()`, `SNESSetDivergenceTolerance()`
3617 @*/
3618 PetscErrorCode SNESSetForceIteration(SNES snes, PetscBool force)
3619 {
3620   PetscFunctionBegin;
3621   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3622   snes->forceiteration = force;
3623   PetscFunctionReturn(PETSC_SUCCESS);
3624 }
3625 
3626 /*@
3627    SNESGetForceIteration - Check whether or not `SNESSolve()` take at least one iteration regardless of the initial residual norm
3628 
3629    Logically Collective
3630 
3631    Input Parameter:
3632 .  snes - the `SNES` context
3633 
3634    Output Parameter:
3635 .  force - `PETSC_TRUE` requires at least one iteration.
3636 
3637    Level: intermediate
3638 
3639 .seealso: [](ch_snes), `SNES`, `SNESSetForceIteration()`, `SNESSetTrustRegionTolerance()`, `SNESSetDivergenceTolerance()`
3640 @*/
3641 PetscErrorCode SNESGetForceIteration(SNES snes, PetscBool *force)
3642 {
3643   PetscFunctionBegin;
3644   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3645   *force = snes->forceiteration;
3646   PetscFunctionReturn(PETSC_SUCCESS);
3647 }
3648 
3649 /*@
3650    SNESSetTolerances - Sets `SNES` various parameters used in convergence tests.
3651 
3652    Logically Collective
3653 
3654    Input Parameters:
3655 +  snes - the `SNES` context
3656 .  abstol - absolute convergence tolerance
3657 .  rtol - relative convergence tolerance
3658 .  stol -  convergence tolerance in terms of the norm of the change in the solution between steps,  || delta x || < stol*|| x ||
3659 .  maxit - maximum number of iterations, default 50.
3660 -  maxf - maximum number of function evaluations (-1 indicates no limit), default 1000
3661 
3662    Options Database Keys:
3663 +    -snes_atol <abstol> - Sets abstol
3664 .    -snes_rtol <rtol> - Sets rtol
3665 .    -snes_stol <stol> - Sets stol
3666 .    -snes_max_it <maxit> - Sets maxit
3667 -    -snes_max_funcs <maxf> - Sets maxf
3668 
3669    Level: intermediate
3670 
3671 .seealso: [](ch_snes), `SNESolve()`, `SNES`, `SNESSetTrustRegionTolerance()`, `SNESSetDivergenceTolerance()`, `SNESSetForceIteration()`
3672 @*/
3673 PetscErrorCode SNESSetTolerances(SNES snes, PetscReal abstol, PetscReal rtol, PetscReal stol, PetscInt maxit, PetscInt maxf)
3674 {
3675   PetscFunctionBegin;
3676   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3677   PetscValidLogicalCollectiveReal(snes, abstol, 2);
3678   PetscValidLogicalCollectiveReal(snes, rtol, 3);
3679   PetscValidLogicalCollectiveReal(snes, stol, 4);
3680   PetscValidLogicalCollectiveInt(snes, maxit, 5);
3681   PetscValidLogicalCollectiveInt(snes, maxf, 6);
3682 
3683   if (abstol != (PetscReal)PETSC_DEFAULT) {
3684     PetscCheck(abstol >= 0.0, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_OUTOFRANGE, "Absolute tolerance %g must be non-negative", (double)abstol);
3685     snes->abstol = abstol;
3686   }
3687   if (rtol != (PetscReal)PETSC_DEFAULT) {
3688     PetscCheck(rtol >= 0.0 && 1.0 > rtol, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_OUTOFRANGE, "Relative tolerance %g must be non-negative and less than 1.0", (double)rtol);
3689     snes->rtol = rtol;
3690   }
3691   if (stol != (PetscReal)PETSC_DEFAULT) {
3692     PetscCheck(stol >= 0.0, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_OUTOFRANGE, "Step tolerance %g must be non-negative", (double)stol);
3693     snes->stol = stol;
3694   }
3695   if (maxit != PETSC_DEFAULT) {
3696     PetscCheck(maxit >= 0, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_OUTOFRANGE, "Maximum number of iterations %" PetscInt_FMT " must be non-negative", maxit);
3697     snes->max_its = maxit;
3698   }
3699   if (maxf != PETSC_DEFAULT) {
3700     PetscCheck(maxf >= -1, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_OUTOFRANGE, "Maximum number of function evaluations %" PetscInt_FMT " must be -1 or nonnegative", maxf);
3701     snes->max_funcs = maxf;
3702   }
3703   snes->tolerancesset = PETSC_TRUE;
3704   PetscFunctionReturn(PETSC_SUCCESS);
3705 }
3706 
3707 /*@
3708    SNESSetDivergenceTolerance - Sets the divergence tolerance used for the `SNES` divergence test.
3709 
3710    Logically Collective
3711 
3712    Input Parameters:
3713 +  snes - the `SNES` context
3714 -  divtol - the divergence tolerance. Use -1 to deactivate the test, default is 1e4
3715 
3716    Options Database Key:
3717 .    -snes_divergence_tolerance <divtol> - Sets `divtol`
3718 
3719    Level: intermediate
3720 
3721 .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetTolerances()`, `SNESGetDivergenceTolerance`
3722 @*/
3723 PetscErrorCode SNESSetDivergenceTolerance(SNES snes, PetscReal divtol)
3724 {
3725   PetscFunctionBegin;
3726   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3727   PetscValidLogicalCollectiveReal(snes, divtol, 2);
3728 
3729   if (divtol != (PetscReal)PETSC_DEFAULT) {
3730     snes->divtol = divtol;
3731   } else {
3732     snes->divtol = 1.0e4;
3733   }
3734   PetscFunctionReturn(PETSC_SUCCESS);
3735 }
3736 
3737 /*@
3738    SNESGetTolerances - Gets various parameters used in convergence tests.
3739 
3740    Not Collective
3741 
3742    Input Parameters:
3743 +  snes - the `SNES` context
3744 .  atol - absolute convergence tolerance
3745 .  rtol - relative convergence tolerance
3746 .  stol -  convergence tolerance in terms of the norm
3747            of the change in the solution between steps
3748 .  maxit - maximum number of iterations
3749 -  maxf - maximum number of function evaluations
3750 
3751    Level: intermediate
3752 
3753    Note:
3754    The user can specify `NULL` for any parameter that is not needed.
3755 
3756 .seealso: [](ch_snes), `SNES`, `SNESSetTolerances()`
3757 @*/
3758 PetscErrorCode SNESGetTolerances(SNES snes, PetscReal *atol, PetscReal *rtol, PetscReal *stol, PetscInt *maxit, PetscInt *maxf)
3759 {
3760   PetscFunctionBegin;
3761   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3762   if (atol) *atol = snes->abstol;
3763   if (rtol) *rtol = snes->rtol;
3764   if (stol) *stol = snes->stol;
3765   if (maxit) *maxit = snes->max_its;
3766   if (maxf) *maxf = snes->max_funcs;
3767   PetscFunctionReturn(PETSC_SUCCESS);
3768 }
3769 
3770 /*@
3771    SNESGetDivergenceTolerance - Gets divergence tolerance used in divergence test.
3772 
3773    Not Collective
3774 
3775    Input Parameters:
3776 +  snes - the `SNES` context
3777 -  divtol - divergence tolerance
3778 
3779    Level: intermediate
3780 
3781 .seealso: [](ch_snes), `SNES`, `SNESSetDivergenceTolerance()`
3782 @*/
3783 PetscErrorCode SNESGetDivergenceTolerance(SNES snes, PetscReal *divtol)
3784 {
3785   PetscFunctionBegin;
3786   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3787   if (divtol) *divtol = snes->divtol;
3788   PetscFunctionReturn(PETSC_SUCCESS);
3789 }
3790 
3791 /*@
3792    SNESSetTrustRegionTolerance - Sets the trust region parameter tolerance.
3793 
3794    Logically Collective
3795 
3796    Input Parameters:
3797 +  snes - the `SNES` context
3798 -  tol - tolerance
3799 
3800    Options Database Key:
3801 .  -snes_tr_tol <tol> - Sets tol
3802 
3803    Level: intermediate
3804 
3805 .seealso: [](ch_snes), `SNES`, `SNESNEWTONTR`, `SNESSetTolerances()`
3806 @*/
3807 PetscErrorCode SNESSetTrustRegionTolerance(SNES snes, PetscReal tol)
3808 {
3809   PetscFunctionBegin;
3810   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
3811   PetscValidLogicalCollectiveReal(snes, tol, 2);
3812   snes->deltatol = tol;
3813   PetscFunctionReturn(PETSC_SUCCESS);
3814 }
3815 
3816 PETSC_INTERN PetscErrorCode SNESMonitorRange_Private(SNES, PetscInt, PetscReal *);
3817 
3818 PetscErrorCode SNESMonitorLGRange(SNES snes, PetscInt n, PetscReal rnorm, void *monctx)
3819 {
3820   PetscDrawLG      lg;
3821   PetscReal        x, y, per;
3822   PetscViewer      v = (PetscViewer)monctx;
3823   static PetscReal prev; /* should be in the context */
3824   PetscDraw        draw;
3825 
3826   PetscFunctionBegin;
3827   PetscValidHeaderSpecific(v, PETSC_VIEWER_CLASSID, 4);
3828   PetscCall(PetscViewerDrawGetDrawLG(v, 0, &lg));
3829   if (!n) PetscCall(PetscDrawLGReset(lg));
3830   PetscCall(PetscDrawLGGetDraw(lg, &draw));
3831   PetscCall(PetscDrawSetTitle(draw, "Residual norm"));
3832   x = (PetscReal)n;
3833   if (rnorm > 0.0) y = PetscLog10Real(rnorm);
3834   else y = -15.0;
3835   PetscCall(PetscDrawLGAddPoint(lg, &x, &y));
3836   if (n < 20 || !(n % 5) || snes->reason) {
3837     PetscCall(PetscDrawLGDraw(lg));
3838     PetscCall(PetscDrawLGSave(lg));
3839   }
3840 
3841   PetscCall(PetscViewerDrawGetDrawLG(v, 1, &lg));
3842   if (!n) PetscCall(PetscDrawLGReset(lg));
3843   PetscCall(PetscDrawLGGetDraw(lg, &draw));
3844   PetscCall(PetscDrawSetTitle(draw, "% elements > .2*max element"));
3845   PetscCall(SNESMonitorRange_Private(snes, n, &per));
3846   x = (PetscReal)n;
3847   y = 100.0 * per;
3848   PetscCall(PetscDrawLGAddPoint(lg, &x, &y));
3849   if (n < 20 || !(n % 5) || snes->reason) {
3850     PetscCall(PetscDrawLGDraw(lg));
3851     PetscCall(PetscDrawLGSave(lg));
3852   }
3853 
3854   PetscCall(PetscViewerDrawGetDrawLG(v, 2, &lg));
3855   if (!n) {
3856     prev = rnorm;
3857     PetscCall(PetscDrawLGReset(lg));
3858   }
3859   PetscCall(PetscDrawLGGetDraw(lg, &draw));
3860   PetscCall(PetscDrawSetTitle(draw, "(norm -oldnorm)/oldnorm"));
3861   x = (PetscReal)n;
3862   y = (prev - rnorm) / prev;
3863   PetscCall(PetscDrawLGAddPoint(lg, &x, &y));
3864   if (n < 20 || !(n % 5) || snes->reason) {
3865     PetscCall(PetscDrawLGDraw(lg));
3866     PetscCall(PetscDrawLGSave(lg));
3867   }
3868 
3869   PetscCall(PetscViewerDrawGetDrawLG(v, 3, &lg));
3870   if (!n) PetscCall(PetscDrawLGReset(lg));
3871   PetscCall(PetscDrawLGGetDraw(lg, &draw));
3872   PetscCall(PetscDrawSetTitle(draw, "(norm -oldnorm)/oldnorm*(% > .2 max)"));
3873   x = (PetscReal)n;
3874   y = (prev - rnorm) / (prev * per);
3875   if (n > 2) { /*skip initial crazy value */
3876     PetscCall(PetscDrawLGAddPoint(lg, &x, &y));
3877   }
3878   if (n < 20 || !(n % 5) || snes->reason) {
3879     PetscCall(PetscDrawLGDraw(lg));
3880     PetscCall(PetscDrawLGSave(lg));
3881   }
3882   prev = rnorm;
3883   PetscFunctionReturn(PETSC_SUCCESS);
3884 }
3885 
3886 /*@
3887    SNESConverged - Run the convergence test and update the `SNESConvergedReason`.
3888 
3889    Collective
3890 
3891    Input Parameters:
3892 +    snes - the `SNES` context
3893 .    it - current iteration
3894 .    xnorm - 2-norm of current iterate
3895 .    snorm - 2-norm of current step
3896 -    fnorm - 2-norm of function
3897 
3898    Level: developer
3899 
3900    Note:
3901    This routine is called by the `SNES` implementations.
3902    It does not typically need to be called by the user.
3903 
3904 .seealso: [](ch_snes), `SNES`, `SNESSolve`, `SNESSetConvergenceTest()`, `SNESGetConvergenceTest()`
3905 @*/
3906 PetscErrorCode SNESConverged(SNES snes, PetscInt it, PetscReal xnorm, PetscReal snorm, PetscReal fnorm)
3907 {
3908   PetscFunctionBegin;
3909   if (!snes->reason) {
3910     if (snes->normschedule == SNES_NORM_ALWAYS) PetscUseTypeMethod(snes, converged, it, xnorm, snorm, fnorm, &snes->reason, snes->cnvP);
3911     if (it == snes->max_its && !snes->reason) {
3912       if (snes->normschedule == SNES_NORM_ALWAYS) {
3913         PetscCall(PetscInfo(snes, "Maximum number of iterations has been reached: %" PetscInt_FMT "\n", snes->max_its));
3914         snes->reason = SNES_DIVERGED_MAX_IT;
3915       } else snes->reason = SNES_CONVERGED_ITS;
3916     }
3917   }
3918   PetscFunctionReturn(PETSC_SUCCESS);
3919 }
3920 
3921 /*@
3922    SNESMonitor - runs the user provided monitor routines, if they exist
3923 
3924    Collective
3925 
3926    Input Parameters:
3927 +  snes - nonlinear solver context obtained from `SNESCreate()`
3928 .  iter - iteration number
3929 -  rnorm - relative norm of the residual
3930 
3931    Level: developer
3932 
3933    Note:
3934    This routine is called by the `SNES` implementations.
3935    It does not typically need to be called by the user.
3936 
3937 .seealso: [](ch_snes), `SNES`, `SNESMonitorSet()`
3938 @*/
3939 PetscErrorCode SNESMonitor(SNES snes, PetscInt iter, PetscReal rnorm)
3940 {
3941   PetscInt i, n = snes->numbermonitors;
3942 
3943   PetscFunctionBegin;
3944   PetscCall(VecLockReadPush(snes->vec_sol));
3945   for (i = 0; i < n; i++) PetscCall((*snes->monitor[i])(snes, iter, rnorm, snes->monitorcontext[i]));
3946   PetscCall(VecLockReadPop(snes->vec_sol));
3947   PetscFunctionReturn(PETSC_SUCCESS);
3948 }
3949 
3950 /* ------------ Routines to set performance monitoring options ----------- */
3951 
3952 /*MC
3953     SNESMonitorFunction - functional form passed to `SNESMonitorSet()` to monitor convergence of nonlinear solver
3954 
3955      Synopsis:
3956      #include <petscsnes.h>
3957     PetscErrorCode SNESMonitorFunction(SNES snes, PetscInt its, PetscReal norm, void *mctx)
3958 
3959      Collective
3960 
3961     Input Parameters:
3962 +    snes - the `SNES` context
3963 .    its - iteration number
3964 .    norm - 2-norm function value (may be estimated)
3965 -    mctx - [optional] monitoring context
3966 
3967    Level: advanced
3968 
3969 .seealso: [](ch_snes), `SNESMonitorSet()`, `SNESMonitorSet()`, `SNESMonitorGet()`
3970 M*/
3971 
3972 /*@C
3973    SNESMonitorSet - Sets an ADDITIONAL function that is to be used at every
3974    iteration of the nonlinear solver to display the iteration's
3975    progress.
3976 
3977    Logically Collective
3978 
3979    Input Parameters:
3980 +  snes - the `SNES` context
3981 .  f - the monitor function,  for the calling sequence see `SNESMonitorFunction`
3982 .  mctx - [optional] user-defined context for private data for the
3983           monitor routine (use `NULL` if no context is desired)
3984 -  monitordestroy - [optional] routine that frees monitor context (may be `NULL`)
3985 
3986    Options Database Keys:
3987 +    -snes_monitor        - sets `SNESMonitorDefault()`
3988 .    -snes_monitor draw::draw_lg - sets line graph monitor,
3989 -    -snes_monitor_cancel - cancels all monitors that have been hardwired into a code by calls to `SNESMonitorSet()`, but does not cancel those set via
3990                             the options database.
3991 
3992    Level: intermediate
3993 
3994    Note:
3995    Several different monitoring routines may be set by calling
3996    `SNESMonitorSet()` multiple times; all will be called in the
3997    order in which they were set.
3998 
3999    Fortran Note:
4000    Only a single monitor function can be set for each `SNES` object
4001 
4002 .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESMonitorDefault()`, `SNESMonitorCancel()`, `SNESMonitorFunction`
4003 @*/
4004 PetscErrorCode SNESMonitorSet(SNES snes, PetscErrorCode (*f)(SNES, PetscInt, PetscReal, void *), void *mctx, PetscErrorCode (*monitordestroy)(void **))
4005 {
4006   PetscInt  i;
4007   PetscBool identical;
4008 
4009   PetscFunctionBegin;
4010   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4011   for (i = 0; i < snes->numbermonitors; i++) {
4012     PetscCall(PetscMonitorCompare((PetscErrorCode(*)(void))f, mctx, monitordestroy, (PetscErrorCode(*)(void))snes->monitor[i], snes->monitorcontext[i], snes->monitordestroy[i], &identical));
4013     if (identical) PetscFunctionReturn(PETSC_SUCCESS);
4014   }
4015   PetscCheck(snes->numbermonitors < MAXSNESMONITORS, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Too many monitors set");
4016   snes->monitor[snes->numbermonitors]          = f;
4017   snes->monitordestroy[snes->numbermonitors]   = monitordestroy;
4018   snes->monitorcontext[snes->numbermonitors++] = (void *)mctx;
4019   PetscFunctionReturn(PETSC_SUCCESS);
4020 }
4021 
4022 /*@
4023    SNESMonitorCancel - Clears all the monitor functions for a `SNES` object.
4024 
4025    Logically Collective
4026 
4027    Input Parameter:
4028 .  snes - the `SNES` context
4029 
4030    Options Database Key:
4031 .  -snes_monitor_cancel - cancels all monitors that have been hardwired
4032     into a code by calls to `SNESMonitorSet()`, but does not cancel those
4033     set via the options database
4034 
4035    Level: intermediate
4036 
4037    Note:
4038    There is no way to clear one specific monitor from a `SNES` object.
4039 
4040 .seealso: [](ch_snes), `SNES`, `SNESMonitorGet()`, `SNESMonitorDefault()`, `SNESMonitorSet()`
4041 @*/
4042 PetscErrorCode SNESMonitorCancel(SNES snes)
4043 {
4044   PetscInt i;
4045 
4046   PetscFunctionBegin;
4047   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4048   for (i = 0; i < snes->numbermonitors; i++) {
4049     if (snes->monitordestroy[i]) PetscCall((*snes->monitordestroy[i])(&snes->monitorcontext[i]));
4050   }
4051   snes->numbermonitors = 0;
4052   PetscFunctionReturn(PETSC_SUCCESS);
4053 }
4054 
4055 /*MC
4056     SNESConvergenceTestFunction - functional form used for testing of convergence of nonlinear solver
4057 
4058      Synopsis:
4059      #include <petscsnes.h>
4060      PetscErrorCode SNESConvergenceTest(SNES snes, PetscInt it, PetscReal xnorm, PetscReal gnorm, PetscReal f, SNESConvergedReason *reason, void *cctx)
4061 
4062      Collective
4063 
4064     Input Parameters:
4065 +    snes - the `SNES` context
4066 .    it - current iteration (0 is the first and is before any Newton step)
4067 .    xnorm - 2-norm of current iterate
4068 .    gnorm - 2-norm of current step
4069 .    f - 2-norm of function
4070 -    cctx - [optional] convergence context
4071 
4072     Output Parameter:
4073 .    reason - reason for convergence/divergence, only needs to be set when convergence or divergence is detected
4074 
4075    Level: intermediate
4076 
4077 .seealso: [](ch_snes), `SNES`, `SNESSolve`, `SNESSetConvergenceTest()`, `SNESGetConvergenceTest()`
4078 M*/
4079 
4080 /*@C
4081    SNESSetConvergenceTest - Sets the function that is to be used
4082    to test for convergence of the nonlinear iterative solution.
4083 
4084    Logically Collective
4085 
4086    Input Parameters:
4087 +  snes - the `SNES` context
4088 .  `SNESConvergenceTestFunction` - routine to test for convergence
4089 .  cctx - [optional] context for private data for the convergence routine  (may be `NULL`)
4090 -  destroy - [optional] destructor for the context (may be `NULL`; `PETSC_NULL_FUNCTION` in Fortran)
4091 
4092    Level: advanced
4093 
4094 .seealso: [](ch_snes), `SNES`, `SNESConvergedDefault()`, `SNESConvergedSkip()`, `SNESConvergenceTestFunction`
4095 @*/
4096 PetscErrorCode SNESSetConvergenceTest(SNES snes, PetscErrorCode (*SNESConvergenceTestFunction)(SNES, PetscInt, PetscReal, PetscReal, PetscReal, SNESConvergedReason *, void *), void *cctx, PetscErrorCode (*destroy)(void *))
4097 {
4098   PetscFunctionBegin;
4099   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4100   if (!SNESConvergenceTestFunction) SNESConvergenceTestFunction = SNESConvergedSkip;
4101   if (snes->ops->convergeddestroy) PetscCall((*snes->ops->convergeddestroy)(snes->cnvP));
4102   snes->ops->converged        = SNESConvergenceTestFunction;
4103   snes->ops->convergeddestroy = destroy;
4104   snes->cnvP                  = cctx;
4105   PetscFunctionReturn(PETSC_SUCCESS);
4106 }
4107 
4108 /*@
4109    SNESGetConvergedReason - Gets the reason the `SNES` iteration was stopped.
4110 
4111    Not Collective
4112 
4113    Input Parameter:
4114 .  snes - the `SNES` context
4115 
4116    Output Parameter:
4117 .  reason - negative value indicates diverged, positive value converged, see `SNESConvergedReason` for the individual convergence tests for complete lists
4118 
4119    Options Database Key:
4120 .   -snes_converged_reason - prints the reason to standard out
4121 
4122    Level: intermediate
4123 
4124    Note:
4125     Should only be called after the call the `SNESSolve()` is complete, if it is called earlier it returns the value `SNES__CONVERGED_ITERATING`.
4126 
4127 .seealso: [](ch_snes), `SNESSolve()`, `SNESSetConvergenceTest()`, `SNESSetConvergedReason()`, `SNESConvergedReason`, `SNESGetConvergedReasonString()`
4128 @*/
4129 PetscErrorCode SNESGetConvergedReason(SNES snes, SNESConvergedReason *reason)
4130 {
4131   PetscFunctionBegin;
4132   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4133   PetscValidPointer(reason, 2);
4134   *reason = snes->reason;
4135   PetscFunctionReturn(PETSC_SUCCESS);
4136 }
4137 
4138 /*@C
4139    SNESGetConvergedReasonString - Return a human readable string for `SNESConvergedReason`
4140 
4141    Not Collective
4142 
4143    Input Parameter:
4144 .  snes - the `SNES` context
4145 
4146    Output Parameter:
4147 .  strreason - a human readable string that describes `SNES` converged reason
4148 
4149    Level: beginner
4150 
4151 .seealso: [](ch_snes), `SNES`, `SNESGetConvergedReason()`
4152 @*/
4153 PetscErrorCode SNESGetConvergedReasonString(SNES snes, const char **strreason)
4154 {
4155   PetscFunctionBegin;
4156   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4157   PetscValidPointer(strreason, 2);
4158   *strreason = SNESConvergedReasons[snes->reason];
4159   PetscFunctionReturn(PETSC_SUCCESS);
4160 }
4161 
4162 /*@
4163    SNESSetConvergedReason - Sets the reason the `SNES` iteration was stopped.
4164 
4165    Not Collective
4166 
4167    Input Parameters:
4168 +  snes - the `SNES` context
4169 -  reason - negative value indicates diverged, positive value converged, see `SNESConvergedReason` or the
4170             manual pages for the individual convergence tests for complete lists
4171 
4172    Level: developer
4173 
4174    Developer Note:
4175    Called inside the various `SNESSolve()` implementations
4176 
4177 .seealso: [](ch_snes), `SNESGetConvergedReason()`, `SNESSetConvergenceTest()`, `SNESConvergedReason`
4178 @*/
4179 PetscErrorCode SNESSetConvergedReason(SNES snes, SNESConvergedReason reason)
4180 {
4181   PetscFunctionBegin;
4182   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4183   snes->reason = reason;
4184   PetscFunctionReturn(PETSC_SUCCESS);
4185 }
4186 
4187 /*@
4188    SNESSetConvergenceHistory - Sets the array used to hold the convergence history.
4189 
4190    Logically Collective
4191 
4192    Input Parameters:
4193 +  snes - iterative context obtained from `SNESCreate()`
4194 .  a   - array to hold history, this array will contain the function norms computed at each step
4195 .  its - integer array holds the number of linear iterations for each solve.
4196 .  na  - size of a and its
4197 -  reset - `PETSC_TRUE` indicates each new nonlinear solve resets the history counter to zero,
4198            else it continues storing new values for new nonlinear solves after the old ones
4199 
4200    Level: intermediate
4201 
4202    Notes:
4203    If 'a' and 'its' are `NULL` then space is allocated for the history. If 'na' `PETSC_DECIDE` or `PETSC_DEFAULT` then a
4204    default array of length 10000 is allocated.
4205 
4206    This routine is useful, e.g., when running a code for purposes
4207    of accurate performance monitoring, when no I/O should be done
4208    during the section of code that is being timed.
4209 
4210 .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESGetConvergenceHistory()`
4211 @*/
4212 PetscErrorCode SNESSetConvergenceHistory(SNES snes, PetscReal a[], PetscInt its[], PetscInt na, PetscBool reset)
4213 {
4214   PetscFunctionBegin;
4215   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4216   if (a) PetscValidRealPointer(a, 2);
4217   if (its) PetscValidIntPointer(its, 3);
4218   if (!a) {
4219     if (na == PETSC_DECIDE || na == PETSC_DEFAULT) na = 1000;
4220     PetscCall(PetscCalloc2(na, &a, na, &its));
4221     snes->conv_hist_alloc = PETSC_TRUE;
4222   }
4223   snes->conv_hist       = a;
4224   snes->conv_hist_its   = its;
4225   snes->conv_hist_max   = (size_t)na;
4226   snes->conv_hist_len   = 0;
4227   snes->conv_hist_reset = reset;
4228   PetscFunctionReturn(PETSC_SUCCESS);
4229 }
4230 
4231 #if defined(PETSC_HAVE_MATLAB)
4232   #include <engine.h> /* MATLAB include file */
4233   #include <mex.h>    /* MATLAB include file */
4234 
4235 PETSC_EXTERN mxArray *SNESGetConvergenceHistoryMatlab(SNES snes)
4236 {
4237   mxArray   *mat;
4238   PetscInt   i;
4239   PetscReal *ar;
4240 
4241   mat = mxCreateDoubleMatrix(snes->conv_hist_len, 1, mxREAL);
4242   ar  = (PetscReal *)mxGetData(mat);
4243   for (i = 0; i < snes->conv_hist_len; i++) ar[i] = snes->conv_hist[i];
4244   return mat;
4245 }
4246 #endif
4247 
4248 /*@C
4249    SNESGetConvergenceHistory - Gets the array used to hold the convergence history.
4250 
4251    Not Collective
4252 
4253    Input Parameter:
4254 .  snes - iterative context obtained from `SNESCreate()`
4255 
4256    Output Parameters:
4257 +  a   - array to hold history, usually was set with `SNESSetConvergenceHistory()`
4258 .  its - integer array holds the number of linear iterations (or
4259          negative if not converged) for each solve.
4260 -  na  - size of `a` and `its`
4261 
4262    Level: intermediate
4263 
4264    Note:
4265    This routine is useful, e.g., when running a code for purposes
4266    of accurate performance monitoring, when no I/O should be done
4267    during the section of code that is being timed.
4268 
4269    Fortran Note:
4270     The calling sequence for this routine in Fortran is
4271 .vb
4272     call SNESGetConvergenceHistory(SNES snes, integer na, integer ierr)
4273 .ve
4274 
4275 .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetConvergenceHistory()`
4276 @*/
4277 PetscErrorCode SNESGetConvergenceHistory(SNES snes, PetscReal *a[], PetscInt *its[], PetscInt *na)
4278 {
4279   PetscFunctionBegin;
4280   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4281   if (a) *a = snes->conv_hist;
4282   if (its) *its = snes->conv_hist_its;
4283   if (na) *na = (PetscInt)snes->conv_hist_len;
4284   PetscFunctionReturn(PETSC_SUCCESS);
4285 }
4286 
4287 /*@C
4288   SNESSetUpdate - Sets the general-purpose update function called
4289   at the beginning of every iteration of the nonlinear solve. Specifically
4290   it is called just before the Jacobian is "evaluated".
4291 
4292   Logically Collective
4293 
4294   Input Parameters:
4295 + snes - The nonlinear solver context
4296 - func - The function
4297 
4298   Calling sequence of `func`:
4299 $ PetscErrorCode func(SNES snes, PetscInt step);
4300 + snes - the nonlinear solver context
4301 - step - The current step of the iteration
4302 
4303   Level: advanced
4304 
4305   Note:
4306      This is NOT what one uses to update the ghost points before a function evaluation, that should be done at the beginning of your function provided
4307      to `SNESSetFunction()`, or `SNESSetPicard()`
4308      This is not used by most users.
4309 
4310      There are a variety of function hooks one many set that are called at different stages of the nonlinear solution process, see the functions listed below.
4311 
4312 .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESSetJacobian()`, `SNESSolve()`, `SNESLineSearchSetPreCheck()`, `SNESLineSearchSetPostCheck()`, `SNESNewtonTRSetPreCheck()`, `SNESNewtonTRSetPostCheck()`,
4313          `SNESMonitorSet()`, `SNESSetDivergenceTest()`
4314 @*/
4315 PetscErrorCode SNESSetUpdate(SNES snes, PetscErrorCode (*func)(SNES, PetscInt))
4316 {
4317   PetscFunctionBegin;
4318   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4319   snes->ops->update = func;
4320   PetscFunctionReturn(PETSC_SUCCESS);
4321 }
4322 
4323 /*@C
4324    SNESConvergedReasonView - Displays the reason a `SNES` solve converged or diverged to a viewer
4325 
4326    Collective
4327 
4328    Parameter:
4329 +  snes - iterative context obtained from `SNESCreate()`
4330 -  viewer - the viewer to display the reason
4331 
4332    Options Database Keys:
4333 +  -snes_converged_reason - print reason for converged or diverged, also prints number of iterations
4334 -  -snes_converged_reason ::failed - only print reason and number of iterations when diverged
4335 
4336   Note:
4337      To change the format of the output call `PetscViewerPushFormat`(viewer,format) before this call. Use `PETSC_VIEWER_DEFAULT` for the default,
4338      use `PETSC_VIEWER_FAILED` to only display a reason if it fails.
4339 
4340    Level: beginner
4341 
4342 .seealso: [](ch_snes), `SNESConvergedReason`, `PetscViewer`, `SNES`,
4343           `SNESCreate()`, `SNESSetUp()`, `SNESDestroy()`, `SNESSetTolerances()`, `SNESConvergedDefault()`, `SNESGetConvergedReason()`,
4344           `SNESConvergedReasonViewFromOptions()`,
4345           `PetscViewerPushFormat()`, `PetscViewerPopFormat()`
4346 @*/
4347 PetscErrorCode SNESConvergedReasonView(SNES snes, PetscViewer viewer)
4348 {
4349   PetscViewerFormat format;
4350   PetscBool         isAscii;
4351 
4352   PetscFunctionBegin;
4353   if (!viewer) viewer = PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)snes));
4354   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &isAscii));
4355   if (isAscii) {
4356     PetscCall(PetscViewerGetFormat(viewer, &format));
4357     PetscCall(PetscViewerASCIIAddTab(viewer, ((PetscObject)snes)->tablevel));
4358     if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
4359       DM       dm;
4360       Vec      u;
4361       PetscDS  prob;
4362       PetscInt Nf, f;
4363       PetscErrorCode (**exactSol)(PetscInt, PetscReal, const PetscReal[], PetscInt, PetscScalar[], void *);
4364       void    **exactCtx;
4365       PetscReal error;
4366 
4367       PetscCall(SNESGetDM(snes, &dm));
4368       PetscCall(SNESGetSolution(snes, &u));
4369       PetscCall(DMGetDS(dm, &prob));
4370       PetscCall(PetscDSGetNumFields(prob, &Nf));
4371       PetscCall(PetscMalloc2(Nf, &exactSol, Nf, &exactCtx));
4372       for (f = 0; f < Nf; ++f) PetscCall(PetscDSGetExactSolution(prob, f, &exactSol[f], &exactCtx[f]));
4373       PetscCall(DMComputeL2Diff(dm, 0.0, exactSol, exactCtx, u, &error));
4374       PetscCall(PetscFree2(exactSol, exactCtx));
4375       if (error < 1.0e-11) PetscCall(PetscViewerASCIIPrintf(viewer, "L_2 Error: < 1.0e-11\n"));
4376       else PetscCall(PetscViewerASCIIPrintf(viewer, "L_2 Error: %g\n", (double)error));
4377     }
4378     if (snes->reason > 0 && format != PETSC_VIEWER_FAILED) {
4379       if (((PetscObject)snes)->prefix) {
4380         PetscCall(PetscViewerASCIIPrintf(viewer, "Nonlinear %s solve converged due to %s iterations %" PetscInt_FMT "\n", ((PetscObject)snes)->prefix, SNESConvergedReasons[snes->reason], snes->iter));
4381       } else {
4382         PetscCall(PetscViewerASCIIPrintf(viewer, "Nonlinear solve converged due to %s iterations %" PetscInt_FMT "\n", SNESConvergedReasons[snes->reason], snes->iter));
4383       }
4384     } else if (snes->reason <= 0) {
4385       if (((PetscObject)snes)->prefix) {
4386         PetscCall(PetscViewerASCIIPrintf(viewer, "Nonlinear %s solve did not converge due to %s iterations %" PetscInt_FMT "\n", ((PetscObject)snes)->prefix, SNESConvergedReasons[snes->reason], snes->iter));
4387       } else {
4388         PetscCall(PetscViewerASCIIPrintf(viewer, "Nonlinear solve did not converge due to %s iterations %" PetscInt_FMT "\n", SNESConvergedReasons[snes->reason], snes->iter));
4389       }
4390     }
4391     PetscCall(PetscViewerASCIISubtractTab(viewer, ((PetscObject)snes)->tablevel));
4392   }
4393   PetscFunctionReturn(PETSC_SUCCESS);
4394 }
4395 
4396 /*@C
4397    SNESConvergedReasonViewSet - Sets an ADDITIONAL function that is to be used at the
4398     end of the nonlinear solver to display the convergence reason of the nonlinear solver.
4399 
4400    Logically Collective
4401 
4402    Input Parameters:
4403 +  snes - the `SNES` context
4404 .  f - the snes converged reason view function
4405 .  vctx - [optional] user-defined context for private data for the
4406           snes converged reason view routine (use `NULL` if no context is desired)
4407 -  reasonviewdestroy - [optional] routine that frees reasonview context (may be `NULL`)
4408 
4409    Options Database Keys:
4410 +    -snes_converged_reason        - sets a default `SNESConvergedReasonView()`
4411 -    -snes_converged_reason_view_cancel - cancels all converged reason viewers that have
4412                             been hardwired into a code by
4413                             calls to `SNESConvergedReasonViewSet()`, but
4414                             does not cancel those set via
4415                             the options database.
4416 
4417    Level: intermediate
4418 
4419    Note:
4420    Several different converged reason view routines may be set by calling
4421    `SNESConvergedReasonViewSet()` multiple times; all will be called in the
4422    order in which they were set.
4423 
4424 .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESConvergedReason`, `SNESGetConvergedReason()`, `SNESConvergedReasonView()`, `SNESConvergedReasonViewCancel()`
4425 @*/
4426 PetscErrorCode SNESConvergedReasonViewSet(SNES snes, PetscErrorCode (*f)(SNES, void *), void *vctx, PetscErrorCode (*reasonviewdestroy)(void **))
4427 {
4428   PetscInt  i;
4429   PetscBool identical;
4430 
4431   PetscFunctionBegin;
4432   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4433   for (i = 0; i < snes->numberreasonviews; i++) {
4434     PetscCall(PetscMonitorCompare((PetscErrorCode(*)(void))f, vctx, reasonviewdestroy, (PetscErrorCode(*)(void))snes->reasonview[i], snes->reasonviewcontext[i], snes->reasonviewdestroy[i], &identical));
4435     if (identical) PetscFunctionReturn(PETSC_SUCCESS);
4436   }
4437   PetscCheck(snes->numberreasonviews < MAXSNESREASONVIEWS, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Too many SNES reasonview set");
4438   snes->reasonview[snes->numberreasonviews]          = f;
4439   snes->reasonviewdestroy[snes->numberreasonviews]   = reasonviewdestroy;
4440   snes->reasonviewcontext[snes->numberreasonviews++] = (void *)vctx;
4441   PetscFunctionReturn(PETSC_SUCCESS);
4442 }
4443 
4444 /*@
4445   SNESConvergedReasonViewFromOptions - Processes command line options to determine if/how a `SNESConvergedReason` is to be viewed.
4446                                        All the user-provided convergedReasonView routines will be involved as well, if they exist.
4447 
4448   Collective
4449 
4450   Input Parameter:
4451 . snes   - the `SNES` object
4452 
4453   Level: advanced
4454 
4455 .seealso: [](ch_snes), `SNES`, `SNESConvergedReason`, `SNESConvergedReasonViewSet()`, `SNESCreate()`, `SNESSetUp()`, `SNESDestroy()`,
4456           `SNESSetTolerances()`, `SNESConvergedDefault()`, `SNESGetConvergedReason()`, `SNESConvergedReasonView()`
4457 @*/
4458 PetscErrorCode SNESConvergedReasonViewFromOptions(SNES snes)
4459 {
4460   PetscViewer       viewer;
4461   PetscBool         flg;
4462   static PetscBool  incall = PETSC_FALSE;
4463   PetscViewerFormat format;
4464   PetscInt          i;
4465 
4466   PetscFunctionBegin;
4467   if (incall) PetscFunctionReturn(PETSC_SUCCESS);
4468   incall = PETSC_TRUE;
4469 
4470   /* All user-provided viewers are called first, if they exist. */
4471   for (i = 0; i < snes->numberreasonviews; i++) PetscCall((*snes->reasonview[i])(snes, snes->reasonviewcontext[i]));
4472 
4473   /* Call PETSc default routine if users ask for it */
4474   PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_converged_reason", &viewer, &format, &flg));
4475   if (flg) {
4476     PetscCall(PetscViewerPushFormat(viewer, format));
4477     PetscCall(SNESConvergedReasonView(snes, viewer));
4478     PetscCall(PetscViewerPopFormat(viewer));
4479     PetscCall(PetscViewerDestroy(&viewer));
4480   }
4481   incall = PETSC_FALSE;
4482   PetscFunctionReturn(PETSC_SUCCESS);
4483 }
4484 
4485 /*@
4486    SNESSolve - Solves a nonlinear system F(x) = b.
4487    Call `SNESSolve()` after calling `SNESCreate()` and optional routines of the form `SNESSetXXX()`.
4488 
4489    Collective
4490 
4491    Input Parameters:
4492 +  snes - the `SNES` context
4493 .  b - the constant part of the equation F(x) = b, or `NULL` to use zero.
4494 -  x - the solution vector.
4495 
4496    Level: beginner
4497 
4498    Note:
4499    The user should initialize the vector,x, with the initial guess
4500    for the nonlinear solve prior to calling `SNESSolve()`.  In particular,
4501    to employ an initial guess of zero, the user should explicitly set
4502    this vector to zero by calling `VecSet()`.
4503 
4504 .seealso: [](ch_snes), `SNES`, `SNESCreate()`, `SNESDestroy()`, `SNESSetFunction()`, `SNESSetJacobian()`, `SNESSetGridSequence()`, `SNESGetSolution()`,
4505           `SNESNewtonTRSetPreCheck()`, `SNESNewtonTRGetPreCheck()`, `SNESNewtonTRSetPostCheck()`, `SNESNewtonTRGetPostCheck()`,
4506           `SNESLineSearchSetPostCheck()`, `SNESLineSearchGetPostCheck()`, `SNESLineSearchSetPreCheck()`, `SNESLineSearchGetPreCheck()`
4507 @*/
4508 PetscErrorCode SNESSolve(SNES snes, Vec b, Vec x)
4509 {
4510   PetscBool flg;
4511   PetscInt  grid;
4512   Vec       xcreated = NULL;
4513   DM        dm;
4514 
4515   PetscFunctionBegin;
4516   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4517   if (x) PetscValidHeaderSpecific(x, VEC_CLASSID, 3);
4518   if (x) PetscCheckSameComm(snes, 1, x, 3);
4519   if (b) PetscValidHeaderSpecific(b, VEC_CLASSID, 2);
4520   if (b) PetscCheckSameComm(snes, 1, b, 2);
4521 
4522   /* High level operations using the nonlinear solver */
4523   {
4524     PetscViewer       viewer;
4525     PetscViewerFormat format;
4526     PetscInt          num;
4527     PetscBool         flg;
4528     static PetscBool  incall = PETSC_FALSE;
4529 
4530     if (!incall) {
4531       /* Estimate the convergence rate of the discretization */
4532       PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_convergence_estimate", &viewer, &format, &flg));
4533       if (flg) {
4534         PetscConvEst conv;
4535         DM           dm;
4536         PetscReal   *alpha; /* Convergence rate of the solution error for each field in the L_2 norm */
4537         PetscInt     Nf;
4538 
4539         incall = PETSC_TRUE;
4540         PetscCall(SNESGetDM(snes, &dm));
4541         PetscCall(DMGetNumFields(dm, &Nf));
4542         PetscCall(PetscCalloc1(Nf, &alpha));
4543         PetscCall(PetscConvEstCreate(PetscObjectComm((PetscObject)snes), &conv));
4544         PetscCall(PetscConvEstSetSolver(conv, (PetscObject)snes));
4545         PetscCall(PetscConvEstSetFromOptions(conv));
4546         PetscCall(PetscConvEstSetUp(conv));
4547         PetscCall(PetscConvEstGetConvRate(conv, alpha));
4548         PetscCall(PetscViewerPushFormat(viewer, format));
4549         PetscCall(PetscConvEstRateView(conv, alpha, viewer));
4550         PetscCall(PetscViewerPopFormat(viewer));
4551         PetscCall(PetscViewerDestroy(&viewer));
4552         PetscCall(PetscConvEstDestroy(&conv));
4553         PetscCall(PetscFree(alpha));
4554         incall = PETSC_FALSE;
4555       }
4556       /* Adaptively refine the initial grid */
4557       num = 1;
4558       PetscCall(PetscOptionsGetInt(NULL, ((PetscObject)snes)->prefix, "-snes_adapt_initial", &num, &flg));
4559       if (flg) {
4560         DMAdaptor adaptor;
4561 
4562         incall = PETSC_TRUE;
4563         PetscCall(DMAdaptorCreate(PetscObjectComm((PetscObject)snes), &adaptor));
4564         PetscCall(DMAdaptorSetSolver(adaptor, snes));
4565         PetscCall(DMAdaptorSetSequenceLength(adaptor, num));
4566         PetscCall(DMAdaptorSetFromOptions(adaptor));
4567         PetscCall(DMAdaptorSetUp(adaptor));
4568         PetscCall(DMAdaptorAdapt(adaptor, x, DM_ADAPTATION_INITIAL, &dm, &x));
4569         PetscCall(DMAdaptorDestroy(&adaptor));
4570         incall = PETSC_FALSE;
4571       }
4572       /* Use grid sequencing to adapt */
4573       num = 0;
4574       PetscCall(PetscOptionsGetInt(NULL, ((PetscObject)snes)->prefix, "-snes_adapt_sequence", &num, NULL));
4575       if (num) {
4576         DMAdaptor adaptor;
4577 
4578         incall = PETSC_TRUE;
4579         PetscCall(DMAdaptorCreate(PetscObjectComm((PetscObject)snes), &adaptor));
4580         PetscCall(DMAdaptorSetSolver(adaptor, snes));
4581         PetscCall(DMAdaptorSetSequenceLength(adaptor, num));
4582         PetscCall(DMAdaptorSetFromOptions(adaptor));
4583         PetscCall(DMAdaptorSetUp(adaptor));
4584         PetscCall(DMAdaptorAdapt(adaptor, x, DM_ADAPTATION_SEQUENTIAL, &dm, &x));
4585         PetscCall(DMAdaptorDestroy(&adaptor));
4586         incall = PETSC_FALSE;
4587       }
4588     }
4589   }
4590   if (!x) x = snes->vec_sol;
4591   if (!x) {
4592     PetscCall(SNESGetDM(snes, &dm));
4593     PetscCall(DMCreateGlobalVector(dm, &xcreated));
4594     x = xcreated;
4595   }
4596   PetscCall(SNESViewFromOptions(snes, NULL, "-snes_view_pre"));
4597 
4598   for (grid = 0; grid < snes->gridsequence; grid++) PetscCall(PetscViewerASCIIPushTab(PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)snes))));
4599   for (grid = 0; grid < snes->gridsequence + 1; grid++) {
4600     /* set solution vector */
4601     if (!grid) PetscCall(PetscObjectReference((PetscObject)x));
4602     PetscCall(VecDestroy(&snes->vec_sol));
4603     snes->vec_sol = x;
4604     PetscCall(SNESGetDM(snes, &dm));
4605 
4606     /* set affine vector if provided */
4607     if (b) PetscCall(PetscObjectReference((PetscObject)b));
4608     PetscCall(VecDestroy(&snes->vec_rhs));
4609     snes->vec_rhs = b;
4610 
4611     if (snes->vec_rhs) PetscCheck(snes->vec_func != snes->vec_rhs, PETSC_COMM_SELF, PETSC_ERR_ARG_IDN, "Right hand side vector cannot be function vector");
4612     PetscCheck(snes->vec_func != snes->vec_sol, PETSC_COMM_SELF, PETSC_ERR_ARG_IDN, "Solution vector cannot be function vector");
4613     PetscCheck(snes->vec_rhs != snes->vec_sol, PETSC_COMM_SELF, PETSC_ERR_ARG_IDN, "Solution vector cannot be right hand side vector");
4614     if (!snes->vec_sol_update /* && snes->vec_sol */) PetscCall(VecDuplicate(snes->vec_sol, &snes->vec_sol_update));
4615     PetscCall(DMShellSetGlobalVector(dm, snes->vec_sol));
4616     PetscCall(SNESSetUp(snes));
4617 
4618     if (!grid) {
4619       if (snes->ops->computeinitialguess) PetscCallBack("SNES callback initial guess", (*snes->ops->computeinitialguess)(snes, snes->vec_sol, snes->initialguessP));
4620     }
4621 
4622     if (snes->conv_hist_reset) snes->conv_hist_len = 0;
4623     if (snes->counters_reset) {
4624       snes->nfuncs      = 0;
4625       snes->linear_its  = 0;
4626       snes->numFailures = 0;
4627     }
4628 
4629     snes->reason = SNES_CONVERGED_ITERATING;
4630     PetscCall(PetscLogEventBegin(SNES_Solve, snes, 0, 0, 0));
4631     PetscUseTypeMethod(snes, solve);
4632     PetscCall(PetscLogEventEnd(SNES_Solve, snes, 0, 0, 0));
4633     PetscCheck(snes->reason, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Internal error, solver %s returned without setting converged reason", ((PetscObject)snes)->type_name);
4634     snes->domainerror = PETSC_FALSE; /* clear the flag if it has been set */
4635 
4636     if (snes->lagjac_persist) snes->jac_iter += snes->iter;
4637     if (snes->lagpre_persist) snes->pre_iter += snes->iter;
4638 
4639     PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)snes), ((PetscObject)snes)->options, ((PetscObject)snes)->prefix, "-snes_test_local_min", NULL, NULL, &flg));
4640     if (flg && !PetscPreLoadingOn) PetscCall(SNESTestLocalMin(snes));
4641     /* Call converged reason views. This may involve user-provided viewers as well */
4642     PetscCall(SNESConvergedReasonViewFromOptions(snes));
4643 
4644     if (snes->errorifnotconverged) PetscCheck(snes->reason >= 0, PetscObjectComm((PetscObject)snes), PETSC_ERR_NOT_CONVERGED, "SNESSolve has not converged");
4645     if (snes->reason < 0) break;
4646     if (grid < snes->gridsequence) {
4647       DM  fine;
4648       Vec xnew;
4649       Mat interp;
4650 
4651       PetscCall(DMRefine(snes->dm, PetscObjectComm((PetscObject)snes), &fine));
4652       PetscCheck(fine, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_INCOMP, "DMRefine() did not perform any refinement, cannot continue grid sequencing");
4653       PetscCall(DMCreateInterpolation(snes->dm, fine, &interp, NULL));
4654       PetscCall(DMCreateGlobalVector(fine, &xnew));
4655       PetscCall(MatInterpolate(interp, x, xnew));
4656       PetscCall(DMInterpolate(snes->dm, interp, fine));
4657       PetscCall(MatDestroy(&interp));
4658       x = xnew;
4659 
4660       PetscCall(SNESReset(snes));
4661       PetscCall(SNESSetDM(snes, fine));
4662       PetscCall(SNESResetFromOptions(snes));
4663       PetscCall(DMDestroy(&fine));
4664       PetscCall(PetscViewerASCIIPopTab(PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)snes))));
4665     }
4666   }
4667   PetscCall(SNESViewFromOptions(snes, NULL, "-snes_view"));
4668   PetscCall(VecViewFromOptions(snes->vec_sol, (PetscObject)snes, "-snes_view_solution"));
4669   PetscCall(DMMonitor(snes->dm));
4670   PetscCall(SNESMonitorPauseFinal_Internal(snes));
4671 
4672   PetscCall(VecDestroy(&xcreated));
4673   PetscCall(PetscObjectSAWsBlock((PetscObject)snes));
4674   PetscFunctionReturn(PETSC_SUCCESS);
4675 }
4676 
4677 /* --------- Internal routines for SNES Package --------- */
4678 
4679 /*@C
4680    SNESSetType - Sets the method for the nonlinear solver.
4681 
4682    Collective
4683 
4684    Input Parameters:
4685 +  snes - the `SNES` context
4686 -  type - a known method
4687 
4688    Options Database Key:
4689 .  -snes_type <type> - Sets the method; use -help for a list
4690    of available methods (for instance, newtonls or newtontr)
4691 
4692   Level: intermediate
4693 
4694    Notes:
4695    See "petsc/include/petscsnes.h" for available methods (for instance)
4696 +    `SNESNEWTONLS` - Newton's method with line search
4697      (systems of nonlinear equations)
4698 -    `SNESNEWTONTR` - Newton's method with trust region
4699      (systems of nonlinear equations)
4700 
4701   Normally, it is best to use the `SNESSetFromOptions()` command and then
4702   set the `SNES` solver type from the options database rather than by using
4703   this routine.  Using the options database provides the user with
4704   maximum flexibility in evaluating the many nonlinear solvers.
4705   The `SNESSetType()` routine is provided for those situations where it
4706   is necessary to set the nonlinear solver independently of the command
4707   line or options database.  This might be the case, for example, when
4708   the choice of solver changes during the execution of the program,
4709   and the user's application is taking responsibility for choosing the
4710   appropriate method.
4711 
4712     Developer Note:
4713     `SNESRegister()` adds a constructor for a new `SNESType` to `SNESList`, `SNESSetType()` locates
4714     the constructor in that list and calls it to create the specific object.
4715 
4716 .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESType`, `SNESCreate()`, `SNESDestroy()`, `SNESGetType()`, `SNESSetFromOptions()`
4717 @*/
4718 PetscErrorCode SNESSetType(SNES snes, SNESType type)
4719 {
4720   PetscBool match;
4721   PetscErrorCode (*r)(SNES);
4722 
4723   PetscFunctionBegin;
4724   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4725   PetscValidCharPointer(type, 2);
4726 
4727   PetscCall(PetscObjectTypeCompare((PetscObject)snes, type, &match));
4728   if (match) PetscFunctionReturn(PETSC_SUCCESS);
4729 
4730   PetscCall(PetscFunctionListFind(SNESList, type, &r));
4731   PetscCheck(r, PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_UNKNOWN_TYPE, "Unable to find requested SNES type %s", type);
4732   /* Destroy the previous private SNES context */
4733   PetscTryTypeMethod(snes, destroy);
4734   /* Reinitialize function pointers in SNESOps structure */
4735   snes->ops->setup          = NULL;
4736   snes->ops->solve          = NULL;
4737   snes->ops->view           = NULL;
4738   snes->ops->setfromoptions = NULL;
4739   snes->ops->destroy        = NULL;
4740 
4741   /* It may happen the user has customized the line search before calling SNESSetType */
4742   if (((PetscObject)snes)->type_name) PetscCall(SNESLineSearchDestroy(&snes->linesearch));
4743 
4744   /* Call the SNESCreate_XXX routine for this particular Nonlinear solver */
4745   snes->setupcalled = PETSC_FALSE;
4746 
4747   PetscCall(PetscObjectChangeTypeName((PetscObject)snes, type));
4748   PetscCall((*r)(snes));
4749   PetscFunctionReturn(PETSC_SUCCESS);
4750 }
4751 
4752 /*@C
4753    SNESGetType - Gets the `SNES` method type and name (as a string).
4754 
4755    Not Collective
4756 
4757    Input Parameter:
4758 .  snes - nonlinear solver context
4759 
4760    Output Parameter:
4761 .  type - `SNES` method (a character string)
4762 
4763    Level: intermediate
4764 
4765 .seealso: [](ch_snes), `SNESSetType()`, `SNESType`, `SNESSetFromOptions()`, `SNES`
4766 @*/
4767 PetscErrorCode SNESGetType(SNES snes, SNESType *type)
4768 {
4769   PetscFunctionBegin;
4770   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4771   PetscValidPointer(type, 2);
4772   *type = ((PetscObject)snes)->type_name;
4773   PetscFunctionReturn(PETSC_SUCCESS);
4774 }
4775 
4776 /*@
4777   SNESSetSolution - Sets the solution vector for use by the `SNES` routines.
4778 
4779   Logically Collective
4780 
4781   Input Parameters:
4782 + snes - the `SNES` context obtained from `SNESCreate()`
4783 - u    - the solution vector
4784 
4785   Level: beginner
4786 
4787 .seealso: [](ch_snes), `SNES`, `SNESSolve()`, `SNESGetSolution()`, `Vec`
4788 @*/
4789 PetscErrorCode SNESSetSolution(SNES snes, Vec u)
4790 {
4791   DM dm;
4792 
4793   PetscFunctionBegin;
4794   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4795   PetscValidHeaderSpecific(u, VEC_CLASSID, 2);
4796   PetscCall(PetscObjectReference((PetscObject)u));
4797   PetscCall(VecDestroy(&snes->vec_sol));
4798 
4799   snes->vec_sol = u;
4800 
4801   PetscCall(SNESGetDM(snes, &dm));
4802   PetscCall(DMShellSetGlobalVector(dm, u));
4803   PetscFunctionReturn(PETSC_SUCCESS);
4804 }
4805 
4806 /*@
4807    SNESGetSolution - Returns the vector where the approximate solution is
4808    stored. This is the fine grid solution when using `SNESSetGridSequence()`.
4809 
4810    Not Collective, but x is parallel if snes is parallel
4811 
4812    Input Parameter:
4813 .  snes - the `SNES` context
4814 
4815    Output Parameter:
4816 .  x - the solution
4817 
4818    Level: intermediate
4819 
4820 .seealso: [](ch_snes), `SNESSetSolution()`, `SNESSolve()`, `SNES`, `SNESGetSolutionUpdate()`, `SNESGetFunction()`
4821 @*/
4822 PetscErrorCode SNESGetSolution(SNES snes, Vec *x)
4823 {
4824   PetscFunctionBegin;
4825   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4826   PetscValidPointer(x, 2);
4827   *x = snes->vec_sol;
4828   PetscFunctionReturn(PETSC_SUCCESS);
4829 }
4830 
4831 /*@
4832    SNESGetSolutionUpdate - Returns the vector where the solution update is
4833    stored.
4834 
4835    Not Collective, but x is parallel if snes is parallel
4836 
4837    Input Parameter:
4838 .  snes - the `SNES` context
4839 
4840    Output Parameter:
4841 .  x - the solution update
4842 
4843    Level: advanced
4844 
4845 .seealso: [](ch_snes), `SNES`, `SNESGetSolution()`, `SNESGetFunction()`
4846 @*/
4847 PetscErrorCode SNESGetSolutionUpdate(SNES snes, Vec *x)
4848 {
4849   PetscFunctionBegin;
4850   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4851   PetscValidPointer(x, 2);
4852   *x = snes->vec_sol_update;
4853   PetscFunctionReturn(PETSC_SUCCESS);
4854 }
4855 
4856 /*@C
4857    SNESGetFunction - Returns the function that defines the nonlinear system set with `SNESSetFunction()`
4858 
4859    Not Collective, but r is parallel if snes is parallel. Collective if r is requested, but has not been created yet.
4860 
4861    Input Parameter:
4862 .  snes - the `SNES` context
4863 
4864    Output Parameters:
4865 +  r - the vector that is used to store residuals (or `NULL` if you don't want it)
4866 .  f - the function (or `NULL` if you don't want it);  for calling sequence see `SNESFunction`
4867 -  ctx - the function context (or `NULL` if you don't want it)
4868 
4869    Level: advanced
4870 
4871     Note:
4872    The vector `r` DOES NOT, in general, contain the current value of the `SNES` nonlinear function
4873 
4874 .seealso: [](ch_snes), `SNES, `SNESSolve()`, `SNESSetFunction()`, `SNESGetSolution()`, `SNESFunction`
4875 @*/
4876 PetscErrorCode SNESGetFunction(SNES snes, Vec *r, PetscErrorCode (**f)(SNES, Vec, Vec, void *), void **ctx)
4877 {
4878   DM dm;
4879 
4880   PetscFunctionBegin;
4881   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4882   if (r) {
4883     if (!snes->vec_func) {
4884       if (snes->vec_rhs) {
4885         PetscCall(VecDuplicate(snes->vec_rhs, &snes->vec_func));
4886       } else if (snes->vec_sol) {
4887         PetscCall(VecDuplicate(snes->vec_sol, &snes->vec_func));
4888       } else if (snes->dm) {
4889         PetscCall(DMCreateGlobalVector(snes->dm, &snes->vec_func));
4890       }
4891     }
4892     *r = snes->vec_func;
4893   }
4894   PetscCall(SNESGetDM(snes, &dm));
4895   PetscCall(DMSNESGetFunction(dm, f, ctx));
4896   PetscFunctionReturn(PETSC_SUCCESS);
4897 }
4898 
4899 /*@C
4900    SNESGetNGS - Returns the function and context set with `SNESSetNGS()`
4901 
4902    Input Parameter:
4903 .  snes - the `SNES` context
4904 
4905    Output Parameters:
4906 +  f - the function (or `NULL`) see `SNESSetNGS()` for details
4907 -  ctx    - the function context (or `NULL`)
4908 
4909    Level: advanced
4910 
4911 .seealso: [](ch_snes), `SNESSetNGS()`, `SNESGetFunction()`
4912 @*/
4913 
4914 PetscErrorCode SNESGetNGS(SNES snes, PetscErrorCode (**f)(SNES, Vec, Vec, void *), void **ctx)
4915 {
4916   DM dm;
4917 
4918   PetscFunctionBegin;
4919   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4920   PetscCall(SNESGetDM(snes, &dm));
4921   PetscCall(DMSNESGetNGS(dm, f, ctx));
4922   PetscFunctionReturn(PETSC_SUCCESS);
4923 }
4924 
4925 /*@C
4926    SNESSetOptionsPrefix - Sets the prefix used for searching for all
4927    `SNES` options in the database.
4928 
4929    Logically Collective
4930 
4931    Input Parameters:
4932 +  snes - the `SNES` context
4933 -  prefix - the prefix to prepend to all option names
4934 
4935    Level: advanced
4936 
4937    Note:
4938    A hyphen (-) must NOT be given at the beginning of the prefix name.
4939    The first character of all runtime options is AUTOMATICALLY the hyphen.
4940 
4941 .seealso: [](ch_snes), `SNES`, `SNESSetFromOptions()`, `SNESAppendOptionsPrefix()`
4942 @*/
4943 PetscErrorCode SNESSetOptionsPrefix(SNES snes, const char prefix[])
4944 {
4945   PetscFunctionBegin;
4946   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4947   PetscCall(PetscObjectSetOptionsPrefix((PetscObject)snes, prefix));
4948   if (!snes->ksp) PetscCall(SNESGetKSP(snes, &snes->ksp));
4949   if (snes->linesearch) {
4950     PetscCall(SNESGetLineSearch(snes, &snes->linesearch));
4951     PetscCall(PetscObjectSetOptionsPrefix((PetscObject)snes->linesearch, prefix));
4952   }
4953   PetscCall(KSPSetOptionsPrefix(snes->ksp, prefix));
4954   PetscFunctionReturn(PETSC_SUCCESS);
4955 }
4956 
4957 /*@C
4958    SNESAppendOptionsPrefix - Appends to the prefix used for searching for all
4959    `SNES` options in the database.
4960 
4961    Logically Collective
4962 
4963    Input Parameters:
4964 +  snes - the `SNES` context
4965 -  prefix - the prefix to prepend to all option names
4966 
4967    Level: advanced
4968 
4969    Note:
4970    A hyphen (-) must NOT be given at the beginning of the prefix name.
4971    The first character of all runtime options is AUTOMATICALLY the hyphen.
4972 
4973 .seealso: [](ch_snes), `SNESGetOptionsPrefix()`, `SNESSetOptionsPrefix()`
4974 @*/
4975 PetscErrorCode SNESAppendOptionsPrefix(SNES snes, const char prefix[])
4976 {
4977   PetscFunctionBegin;
4978   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
4979   PetscCall(PetscObjectAppendOptionsPrefix((PetscObject)snes, prefix));
4980   if (!snes->ksp) PetscCall(SNESGetKSP(snes, &snes->ksp));
4981   if (snes->linesearch) {
4982     PetscCall(SNESGetLineSearch(snes, &snes->linesearch));
4983     PetscCall(PetscObjectAppendOptionsPrefix((PetscObject)snes->linesearch, prefix));
4984   }
4985   PetscCall(KSPAppendOptionsPrefix(snes->ksp, prefix));
4986   PetscFunctionReturn(PETSC_SUCCESS);
4987 }
4988 
4989 /*@C
4990    SNESGetOptionsPrefix - Gets the prefix used for searching for all
4991    `SNES` options in the database.
4992 
4993    Not Collective
4994 
4995    Input Parameter:
4996 .  snes - the `SNES` context
4997 
4998    Output Parameter:
4999 .  prefix - pointer to the prefix string used
5000 
5001    Level: advanced
5002 
5003    Fortran Note:
5004     The user should pass in a string 'prefix' of
5005    sufficient length to hold the prefix.
5006 
5007 .seealso: [](ch_snes), `SNES`, `SNESSetOptionsPrefix()`, `SNESAppendOptionsPrefix()`
5008 @*/
5009 PetscErrorCode SNESGetOptionsPrefix(SNES snes, const char *prefix[])
5010 {
5011   PetscFunctionBegin;
5012   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5013   PetscCall(PetscObjectGetOptionsPrefix((PetscObject)snes, prefix));
5014   PetscFunctionReturn(PETSC_SUCCESS);
5015 }
5016 
5017 /*@C
5018   SNESRegister - Adds a method to the nonlinear solver package.
5019 
5020    Not Collective
5021 
5022    Input Parameters:
5023 +  sname - name of a new user-defined solver
5024 -  function - routine to create method context
5025 
5026    Level: advanced
5027 
5028    Note:
5029    `SNESRegister()` may be called multiple times to add several user-defined solvers.
5030 
5031    Sample usage:
5032 .vb
5033    SNESRegister("my_solver", MySolverCreate);
5034 .ve
5035 
5036    Then, your solver can be chosen with the procedural interface via
5037 $     SNESSetType(snes, "my_solver")
5038    or at runtime via the option
5039 $     -snes_type my_solver
5040 
5041 .seealso: [](ch_snes), `SNESRegisterAll()`, `SNESRegisterDestroy()`
5042 @*/
5043 PetscErrorCode SNESRegister(const char sname[], PetscErrorCode (*function)(SNES))
5044 {
5045   PetscFunctionBegin;
5046   PetscCall(SNESInitializePackage());
5047   PetscCall(PetscFunctionListAdd(&SNESList, sname, function));
5048   PetscFunctionReturn(PETSC_SUCCESS);
5049 }
5050 
5051 PetscErrorCode SNESTestLocalMin(SNES snes)
5052 {
5053   PetscInt    N, i, j;
5054   Vec         u, uh, fh;
5055   PetscScalar value;
5056   PetscReal   norm;
5057 
5058   PetscFunctionBegin;
5059   PetscCall(SNESGetSolution(snes, &u));
5060   PetscCall(VecDuplicate(u, &uh));
5061   PetscCall(VecDuplicate(u, &fh));
5062 
5063   /* currently only works for sequential */
5064   PetscCall(PetscPrintf(PetscObjectComm((PetscObject)snes), "Testing FormFunction() for local min\n"));
5065   PetscCall(VecGetSize(u, &N));
5066   for (i = 0; i < N; i++) {
5067     PetscCall(VecCopy(u, uh));
5068     PetscCall(PetscPrintf(PetscObjectComm((PetscObject)snes), "i = %" PetscInt_FMT "\n", i));
5069     for (j = -10; j < 11; j++) {
5070       value = PetscSign(j) * PetscExpReal(PetscAbs(j) - 10.0);
5071       PetscCall(VecSetValue(uh, i, value, ADD_VALUES));
5072       PetscCall(SNESComputeFunction(snes, uh, fh));
5073       PetscCall(VecNorm(fh, NORM_2, &norm));
5074       PetscCall(PetscPrintf(PetscObjectComm((PetscObject)snes), "       j norm %" PetscInt_FMT " %18.16e\n", j, (double)norm));
5075       value = -value;
5076       PetscCall(VecSetValue(uh, i, value, ADD_VALUES));
5077     }
5078   }
5079   PetscCall(VecDestroy(&uh));
5080   PetscCall(VecDestroy(&fh));
5081   PetscFunctionReturn(PETSC_SUCCESS);
5082 }
5083 
5084 /*@
5085    SNESKSPSetUseEW - Sets `SNES` to the use Eisenstat-Walker method for
5086    computing relative tolerance for linear solvers within an inexact
5087    Newton method.
5088 
5089    Logically Collective
5090 
5091    Input Parameters:
5092 +  snes - `SNES` context
5093 -  flag - `PETSC_TRUE` or `PETSC_FALSE`
5094 
5095     Options Database Keys:
5096 +  -snes_ksp_ew - use Eisenstat-Walker method for determining linear system convergence
5097 .  -snes_ksp_ew_version ver - version of  Eisenstat-Walker method
5098 .  -snes_ksp_ew_rtol0 <rtol0> - Sets rtol0
5099 .  -snes_ksp_ew_rtolmax <rtolmax> - Sets rtolmax
5100 .  -snes_ksp_ew_gamma <gamma> - Sets gamma
5101 .  -snes_ksp_ew_alpha <alpha> - Sets alpha
5102 .  -snes_ksp_ew_alpha2 <alpha2> - Sets alpha2
5103 -  -snes_ksp_ew_threshold <threshold> - Sets threshold
5104 
5105    Level: advanced
5106 
5107    Note:
5108    The default is to use a constant relative tolerance for
5109    the inner linear solvers.  Alternatively, one can use the
5110    Eisenstat-Walker method, where the relative convergence tolerance
5111    is reset at each Newton iteration according progress of the nonlinear
5112    solver.
5113 
5114    Reference:
5115 .  - * S. C. Eisenstat and H. F. Walker, "Choosing the forcing terms in an inexact Newton method", SISC 17 (1), pp.16-32, 1996.
5116 
5117 .seealso: [](ch_snes), `KSP`, `SNES`, `SNESKSPGetUseEW()`, `SNESKSPGetParametersEW()`, `SNESKSPSetParametersEW()`
5118 @*/
5119 PetscErrorCode SNESKSPSetUseEW(SNES snes, PetscBool flag)
5120 {
5121   PetscFunctionBegin;
5122   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5123   PetscValidLogicalCollectiveBool(snes, flag, 2);
5124   snes->ksp_ewconv = flag;
5125   PetscFunctionReturn(PETSC_SUCCESS);
5126 }
5127 
5128 /*@
5129    SNESKSPGetUseEW - Gets if `SNES` is using Eisenstat-Walker method
5130    for computing relative tolerance for linear solvers within an
5131    inexact Newton method.
5132 
5133    Not Collective
5134 
5135    Input Parameter:
5136 .  snes - `SNES` context
5137 
5138    Output Parameter:
5139 .  flag - `PETSC_TRUE` or `PETSC_FALSE`
5140 
5141    Level: advanced
5142 
5143 .seealso: [](ch_snes), `SNESKSPSetUseEW()`, `SNESKSPGetParametersEW()`, `SNESKSPSetParametersEW()`
5144 @*/
5145 PetscErrorCode SNESKSPGetUseEW(SNES snes, PetscBool *flag)
5146 {
5147   PetscFunctionBegin;
5148   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5149   PetscValidBoolPointer(flag, 2);
5150   *flag = snes->ksp_ewconv;
5151   PetscFunctionReturn(PETSC_SUCCESS);
5152 }
5153 
5154 /*@
5155    SNESKSPSetParametersEW - Sets parameters for Eisenstat-Walker
5156    convergence criteria for the linear solvers within an inexact
5157    Newton method.
5158 
5159    Logically Collective
5160 
5161    Input Parameters:
5162 +    snes - `SNES` context
5163 .    version - version 1, 2 (default is 2), 3 or 4
5164 .    rtol_0 - initial relative tolerance (0 <= rtol_0 < 1)
5165 .    rtol_max - maximum relative tolerance (0 <= rtol_max < 1)
5166 .    gamma - multiplicative factor for version 2 rtol computation
5167              (0 <= gamma2 <= 1)
5168 .    alpha - power for version 2 rtol computation (1 < alpha <= 2)
5169 .    alpha2 - power for safeguard
5170 -    threshold - threshold for imposing safeguard (0 < threshold < 1)
5171 
5172    Level: advanced
5173 
5174    Notes:
5175    Version 3 was contributed by Luis Chacon, June 2006.
5176 
5177    Use `PETSC_DEFAULT` to retain the default for any of the parameters.
5178 
5179 .seealso: [](ch_snes), `SNES`, `SNESKSPSetUseEW()`, `SNESKSPGetUseEW()`, `SNESKSPGetParametersEW()`
5180 @*/
5181 PetscErrorCode SNESKSPSetParametersEW(SNES snes, PetscInt version, PetscReal rtol_0, PetscReal rtol_max, PetscReal gamma, PetscReal alpha, PetscReal alpha2, PetscReal threshold)
5182 {
5183   SNESKSPEW *kctx;
5184 
5185   PetscFunctionBegin;
5186   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5187   kctx = (SNESKSPEW *)snes->kspconvctx;
5188   PetscCheck(kctx, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "No Eisenstat-Walker context existing");
5189   PetscValidLogicalCollectiveInt(snes, version, 2);
5190   PetscValidLogicalCollectiveReal(snes, rtol_0, 3);
5191   PetscValidLogicalCollectiveReal(snes, rtol_max, 4);
5192   PetscValidLogicalCollectiveReal(snes, gamma, 5);
5193   PetscValidLogicalCollectiveReal(snes, alpha, 6);
5194   PetscValidLogicalCollectiveReal(snes, alpha2, 7);
5195   PetscValidLogicalCollectiveReal(snes, threshold, 8);
5196 
5197   if (version != PETSC_DEFAULT) kctx->version = version;
5198   if (rtol_0 != (PetscReal)PETSC_DEFAULT) kctx->rtol_0 = rtol_0;
5199   if (rtol_max != (PetscReal)PETSC_DEFAULT) kctx->rtol_max = rtol_max;
5200   if (gamma != (PetscReal)PETSC_DEFAULT) kctx->gamma = gamma;
5201   if (alpha != (PetscReal)PETSC_DEFAULT) kctx->alpha = alpha;
5202   if (alpha2 != (PetscReal)PETSC_DEFAULT) kctx->alpha2 = alpha2;
5203   if (threshold != (PetscReal)PETSC_DEFAULT) kctx->threshold = threshold;
5204 
5205   PetscCheck(kctx->version >= 1 && kctx->version <= 4, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Only versions 1 to 4 are supported: %" PetscInt_FMT, kctx->version);
5206   PetscCheck(kctx->rtol_0 >= 0.0 && kctx->rtol_0 < 1.0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "0.0 <= rtol_0 < 1.0: %g", (double)kctx->rtol_0);
5207   PetscCheck(kctx->rtol_max >= 0.0 && kctx->rtol_max < 1.0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "0.0 <= rtol_max (%g) < 1.0", (double)kctx->rtol_max);
5208   PetscCheck(kctx->gamma >= 0.0 && kctx->gamma <= 1.0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "0.0 <= gamma (%g) <= 1.0", (double)kctx->gamma);
5209   PetscCheck(kctx->alpha > 1.0 && kctx->alpha <= 2.0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "1.0 < alpha (%g) <= 2.0", (double)kctx->alpha);
5210   PetscCheck(kctx->threshold > 0.0 && kctx->threshold < 1.0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "0.0 < threshold (%g) < 1.0", (double)kctx->threshold);
5211   PetscFunctionReturn(PETSC_SUCCESS);
5212 }
5213 
5214 /*@
5215    SNESKSPGetParametersEW - Gets parameters for Eisenstat-Walker
5216    convergence criteria for the linear solvers within an inexact
5217    Newton method.
5218 
5219    Not Collective
5220 
5221    Input Parameter:
5222 .    snes - `SNES` context
5223 
5224    Output Parameters:
5225 +    version - version 1, 2 (default is 2), 3 or 4
5226 .    rtol_0 - initial relative tolerance (0 <= rtol_0 < 1)
5227 .    rtol_max - maximum relative tolerance (0 <= rtol_max < 1)
5228 .    gamma - multiplicative factor for version 2 rtol computation (0 <= gamma2 <= 1)
5229 .    alpha - power for version 2 rtol computation (1 < alpha <= 2)
5230 .    alpha2 - power for safeguard
5231 -    threshold - threshold for imposing safeguard (0 < threshold < 1)
5232 
5233    Level: advanced
5234 
5235 .seealso: [](ch_snes), `SNES`, `SNESKSPSetUseEW()`, `SNESKSPGetUseEW()`, `SNESKSPSetParametersEW()`
5236 @*/
5237 PetscErrorCode SNESKSPGetParametersEW(SNES snes, PetscInt *version, PetscReal *rtol_0, PetscReal *rtol_max, PetscReal *gamma, PetscReal *alpha, PetscReal *alpha2, PetscReal *threshold)
5238 {
5239   SNESKSPEW *kctx;
5240 
5241   PetscFunctionBegin;
5242   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5243   kctx = (SNESKSPEW *)snes->kspconvctx;
5244   PetscCheck(kctx, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "No Eisenstat-Walker context existing");
5245   if (version) *version = kctx->version;
5246   if (rtol_0) *rtol_0 = kctx->rtol_0;
5247   if (rtol_max) *rtol_max = kctx->rtol_max;
5248   if (gamma) *gamma = kctx->gamma;
5249   if (alpha) *alpha = kctx->alpha;
5250   if (alpha2) *alpha2 = kctx->alpha2;
5251   if (threshold) *threshold = kctx->threshold;
5252   PetscFunctionReturn(PETSC_SUCCESS);
5253 }
5254 
5255 PetscErrorCode KSPPreSolve_SNESEW(KSP ksp, Vec b, Vec x, SNES snes)
5256 {
5257   SNESKSPEW *kctx = (SNESKSPEW *)snes->kspconvctx;
5258   PetscReal  rtol = PETSC_DEFAULT, stol;
5259 
5260   PetscFunctionBegin;
5261   if (!snes->ksp_ewconv) PetscFunctionReturn(PETSC_SUCCESS);
5262   if (!snes->iter) {
5263     rtol = kctx->rtol_0; /* first time in, so use the original user rtol */
5264     PetscCall(VecNorm(snes->vec_func, NORM_2, &kctx->norm_first));
5265   } else {
5266     PetscCheck(kctx->version >= 1 && kctx->version <= 4, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Only versions 1-4 are supported: %" PetscInt_FMT, kctx->version);
5267     if (kctx->version == 1) {
5268       rtol = PetscAbsReal(snes->norm - kctx->lresid_last) / kctx->norm_last;
5269       stol = PetscPowReal(kctx->rtol_last, kctx->alpha2);
5270       if (stol > kctx->threshold) rtol = PetscMax(rtol, stol);
5271     } else if (kctx->version == 2) {
5272       rtol = kctx->gamma * PetscPowReal(snes->norm / kctx->norm_last, kctx->alpha);
5273       stol = kctx->gamma * PetscPowReal(kctx->rtol_last, kctx->alpha);
5274       if (stol > kctx->threshold) rtol = PetscMax(rtol, stol);
5275     } else if (kctx->version == 3) { /* contributed by Luis Chacon, June 2006. */
5276       rtol = kctx->gamma * PetscPowReal(snes->norm / kctx->norm_last, kctx->alpha);
5277       /* safeguard: avoid sharp decrease of rtol */
5278       stol = kctx->gamma * PetscPowReal(kctx->rtol_last, kctx->alpha);
5279       stol = PetscMax(rtol, stol);
5280       rtol = PetscMin(kctx->rtol_0, stol);
5281       /* safeguard: avoid oversolving */
5282       stol = kctx->gamma * (kctx->norm_first * snes->rtol) / snes->norm;
5283       stol = PetscMax(rtol, stol);
5284       rtol = PetscMin(kctx->rtol_0, stol);
5285     } else /* if (kctx->version == 4) */ {
5286       /* H.-B. An et al. Journal of Computational and Applied Mathematics 200 (2007) 47-60 */
5287       PetscReal ared = PetscAbsReal(kctx->norm_last - snes->norm);
5288       PetscReal pred = PetscAbsReal(kctx->norm_last - kctx->lresid_last);
5289       PetscReal rk   = ared / pred;
5290       if (rk < kctx->v4_p1) rtol = 1. - 2. * kctx->v4_p1;
5291       else if (rk < kctx->v4_p2) rtol = kctx->rtol_last;
5292       else if (rk < kctx->v4_p3) rtol = kctx->v4_m1 * kctx->rtol_last;
5293       else rtol = kctx->v4_m2 * kctx->rtol_last;
5294 
5295       if (kctx->rtol_last_2 > kctx->v4_m3 && kctx->rtol_last > kctx->v4_m3 && kctx->rk_last_2 < kctx->v4_p1 && kctx->rk_last < kctx->v4_p1) rtol = kctx->v4_m4 * kctx->rtol_last;
5296       kctx->rtol_last_2 = kctx->rtol_last;
5297       kctx->rk_last_2   = kctx->rk_last;
5298       kctx->rk_last     = rk;
5299     }
5300   }
5301   /* safeguard: avoid rtol greater than rtol_max */
5302   rtol = PetscMin(rtol, kctx->rtol_max);
5303   PetscCall(KSPSetTolerances(ksp, rtol, PETSC_DEFAULT, PETSC_DEFAULT, PETSC_DEFAULT));
5304   PetscCall(PetscInfo(snes, "iter %" PetscInt_FMT ", Eisenstat-Walker (version %" PetscInt_FMT ") KSP rtol=%g\n", snes->iter, kctx->version, (double)rtol));
5305   PetscFunctionReturn(PETSC_SUCCESS);
5306 }
5307 
5308 PetscErrorCode KSPPostSolve_SNESEW(KSP ksp, Vec b, Vec x, SNES snes)
5309 {
5310   SNESKSPEW *kctx = (SNESKSPEW *)snes->kspconvctx;
5311   PCSide     pcside;
5312   Vec        lres;
5313 
5314   PetscFunctionBegin;
5315   if (!snes->ksp_ewconv) PetscFunctionReturn(PETSC_SUCCESS);
5316   PetscCall(KSPGetTolerances(ksp, &kctx->rtol_last, NULL, NULL, NULL));
5317   kctx->norm_last = snes->norm;
5318   if (kctx->version == 1 || kctx->version == 4) {
5319     PC        pc;
5320     PetscBool getRes;
5321 
5322     PetscCall(KSPGetPC(ksp, &pc));
5323     PetscCall(PetscObjectTypeCompare((PetscObject)pc, PCNONE, &getRes));
5324     if (!getRes) {
5325       KSPNormType normtype;
5326 
5327       PetscCall(KSPGetNormType(ksp, &normtype));
5328       getRes = (PetscBool)(normtype == KSP_NORM_UNPRECONDITIONED);
5329     }
5330     PetscCall(KSPGetPCSide(ksp, &pcside));
5331     if (pcside == PC_RIGHT || getRes) { /* KSP residual is true linear residual */
5332       PetscCall(KSPGetResidualNorm(ksp, &kctx->lresid_last));
5333     } else {
5334       /* KSP residual is preconditioned residual */
5335       /* compute true linear residual norm */
5336       Mat J;
5337       PetscCall(KSPGetOperators(ksp, &J, NULL));
5338       PetscCall(VecDuplicate(b, &lres));
5339       PetscCall(MatMult(J, x, lres));
5340       PetscCall(VecAYPX(lres, -1.0, b));
5341       PetscCall(VecNorm(lres, NORM_2, &kctx->lresid_last));
5342       PetscCall(VecDestroy(&lres));
5343     }
5344   }
5345   PetscFunctionReturn(PETSC_SUCCESS);
5346 }
5347 
5348 /*@
5349    SNESGetKSP - Returns the `KSP` context for a `SNES` solver.
5350 
5351    Not Collective, but if snes is parallel, then ksp is parallel
5352 
5353    Input Parameter:
5354 .  snes - the `SNES` context
5355 
5356    Output Parameter:
5357 .  ksp - the `KSP` context
5358 
5359    Level: beginner
5360 
5361    Notes:
5362    The user can then directly manipulate the `KSP` context to set various
5363    options, etc.  Likewise, the user can then extract and manipulate the
5364    `PC` contexts as well.
5365 
5366    Some `SNESType`s do not use a `KSP` but a `KSP` is still returned by this function
5367 
5368 .seealso: [](ch_snes), `SNES`, `KSP`, `PC`, `KSPGetPC()`, `SNESCreate()`, `KSPCreate()`, `SNESSetKSP()`
5369 @*/
5370 PetscErrorCode SNESGetKSP(SNES snes, KSP *ksp)
5371 {
5372   PetscFunctionBegin;
5373   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5374   PetscValidPointer(ksp, 2);
5375 
5376   if (!snes->ksp) {
5377     PetscCall(KSPCreate(PetscObjectComm((PetscObject)snes), &snes->ksp));
5378     PetscCall(PetscObjectIncrementTabLevel((PetscObject)snes->ksp, (PetscObject)snes, 1));
5379 
5380     PetscCall(KSPSetPreSolve(snes->ksp, (PetscErrorCode(*)(KSP, Vec, Vec, void *))KSPPreSolve_SNESEW, snes));
5381     PetscCall(KSPSetPostSolve(snes->ksp, (PetscErrorCode(*)(KSP, Vec, Vec, void *))KSPPostSolve_SNESEW, snes));
5382 
5383     PetscCall(KSPMonitorSetFromOptions(snes->ksp, "-snes_monitor_ksp", "snes_preconditioned_residual", snes));
5384     PetscCall(PetscObjectSetOptions((PetscObject)snes->ksp, ((PetscObject)snes)->options));
5385   }
5386   *ksp = snes->ksp;
5387   PetscFunctionReturn(PETSC_SUCCESS);
5388 }
5389 
5390 #include <petsc/private/dmimpl.h>
5391 /*@
5392    SNESSetDM - Sets the `DM` that may be used by some nonlinear solvers or their underlying preconditioners
5393 
5394    Logically Collective
5395 
5396    Input Parameters:
5397 +  snes - the nonlinear solver context
5398 -  dm - the dm, cannot be `NULL`
5399 
5400    Level: intermediate
5401 
5402    Note:
5403    A `DM` can only be used for solving one problem at a time because information about the problem is stored on the `DM`,
5404    even when not using interfaces like `DMSNESSetFunction()`.  Use `DMClone()` to get a distinct `DM` when solving different
5405    problems using the same function space.
5406 
5407 .seealso: [](ch_snes), `DM`, `SNESGetDM()`, `KSPSetDM()`, `KSPGetDM()`
5408 @*/
5409 PetscErrorCode SNESSetDM(SNES snes, DM dm)
5410 {
5411   KSP    ksp;
5412   DMSNES sdm;
5413 
5414   PetscFunctionBegin;
5415   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5416   PetscValidHeaderSpecific(dm, DM_CLASSID, 2);
5417   PetscCall(PetscObjectReference((PetscObject)dm));
5418   if (snes->dm) { /* Move the DMSNES context over to the new DM unless the new DM already has one */
5419     if (snes->dm->dmsnes && !dm->dmsnes) {
5420       PetscCall(DMCopyDMSNES(snes->dm, dm));
5421       PetscCall(DMGetDMSNES(snes->dm, &sdm));
5422       if (sdm->originaldm == snes->dm) sdm->originaldm = dm; /* Grant write privileges to the replacement DM */
5423     }
5424     PetscCall(DMCoarsenHookRemove(snes->dm, DMCoarsenHook_SNESVecSol, DMRestrictHook_SNESVecSol, snes));
5425     PetscCall(DMDestroy(&snes->dm));
5426   }
5427   snes->dm     = dm;
5428   snes->dmAuto = PETSC_FALSE;
5429 
5430   PetscCall(SNESGetKSP(snes, &ksp));
5431   PetscCall(KSPSetDM(ksp, dm));
5432   PetscCall(KSPSetDMActive(ksp, PETSC_FALSE));
5433   if (snes->npc) {
5434     PetscCall(SNESSetDM(snes->npc, snes->dm));
5435     PetscCall(SNESSetNPCSide(snes, snes->npcside));
5436   }
5437   PetscFunctionReturn(PETSC_SUCCESS);
5438 }
5439 
5440 /*@
5441    SNESGetDM - Gets the `DM` that may be used by some preconditioners
5442 
5443    Not Collective but dm obtained is parallel on snes
5444 
5445    Input Parameter:
5446 . snes - the preconditioner context
5447 
5448    Output Parameter:
5449 .  dm - the dm
5450 
5451    Level: intermediate
5452 
5453 .seealso: [](ch_snes), `DM`, `SNESSetDM()`, `KSPSetDM()`, `KSPGetDM()`
5454 @*/
5455 PetscErrorCode SNESGetDM(SNES snes, DM *dm)
5456 {
5457   PetscFunctionBegin;
5458   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5459   if (!snes->dm) {
5460     PetscCall(DMShellCreate(PetscObjectComm((PetscObject)snes), &snes->dm));
5461     snes->dmAuto = PETSC_TRUE;
5462   }
5463   *dm = snes->dm;
5464   PetscFunctionReturn(PETSC_SUCCESS);
5465 }
5466 
5467 /*@
5468   SNESSetNPC - Sets the nonlinear preconditioner to be used.
5469 
5470   Collective
5471 
5472   Input Parameters:
5473 + snes - iterative context obtained from `SNESCreate()`
5474 - npc   - the preconditioner object
5475 
5476   Level: developer
5477 
5478   Notes:
5479   Use `SNESGetNPC()` to retrieve the preconditioner context (for example,
5480   to configure it using the API).
5481 
5482   Only some `SNESType` can use a nonlinear preconditioner
5483 
5484 .seealso: [](ch_snes), `SNESNGS`, `SNESFAS`, `SNESGetNPC()`, `SNESHasNPC()`
5485 @*/
5486 PetscErrorCode SNESSetNPC(SNES snes, SNES npc)
5487 {
5488   PetscFunctionBegin;
5489   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5490   PetscValidHeaderSpecific(npc, SNES_CLASSID, 2);
5491   PetscCheckSameComm(snes, 1, npc, 2);
5492   PetscCall(PetscObjectReference((PetscObject)npc));
5493   PetscCall(SNESDestroy(&snes->npc));
5494   snes->npc = npc;
5495   PetscFunctionReturn(PETSC_SUCCESS);
5496 }
5497 
5498 /*@
5499   SNESGetNPC - Gets a nonlinear preconditioning solver SNES` to be used to precondition the original nonlinear solver.
5500 
5501   Not Collective; but any changes to the obtained the npc object must be applied collectively
5502 
5503   Input Parameter:
5504 . snes - iterative context obtained from `SNESCreate()`
5505 
5506   Output Parameter:
5507 . npc - preconditioner context
5508 
5509   Options Database Key:
5510 . -npc_snes_type <type> - set the type of the `SNES` to use as the nonlinear preconditioner
5511 
5512   Level: developer
5513 
5514   Notes:
5515     If a `SNES` was previously set with `SNESSetNPC()` then that value is returned, otherwise a new `SNES` object is created.
5516 
5517     The (preconditioner) `SNES` returned automatically inherits the same nonlinear function and Jacobian supplied to the original
5518     `SNES`
5519 
5520 .seealso: [](ch_snes), `SNESSetNPC()`, `SNESHasNPC()`, `SNES`, `SNESCreate()`
5521 @*/
5522 PetscErrorCode SNESGetNPC(SNES snes, SNES *pc)
5523 {
5524   const char *optionsprefix;
5525 
5526   PetscFunctionBegin;
5527   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5528   PetscValidPointer(pc, 2);
5529   if (!snes->npc) {
5530     void *ctx;
5531 
5532     PetscCall(SNESCreate(PetscObjectComm((PetscObject)snes), &snes->npc));
5533     PetscCall(PetscObjectIncrementTabLevel((PetscObject)snes->npc, (PetscObject)snes, 1));
5534     PetscCall(SNESGetOptionsPrefix(snes, &optionsprefix));
5535     PetscCall(SNESSetOptionsPrefix(snes->npc, optionsprefix));
5536     PetscCall(SNESAppendOptionsPrefix(snes->npc, "npc_"));
5537     PetscCall(SNESGetApplicationContext(snes, &ctx));
5538     PetscCall(SNESSetApplicationContext(snes->npc, ctx));
5539     PetscCall(SNESSetCountersReset(snes->npc, PETSC_FALSE));
5540   }
5541   *pc = snes->npc;
5542   PetscFunctionReturn(PETSC_SUCCESS);
5543 }
5544 
5545 /*@
5546   SNESHasNPC - Returns whether a nonlinear preconditioner exists
5547 
5548   Not Collective
5549 
5550   Input Parameter:
5551 . snes - iterative context obtained from `SNESCreate()`
5552 
5553   Output Parameter:
5554 . has_npc - whether the `SNES` has an NPC or not
5555 
5556   Level: developer
5557 
5558 .seealso: [](ch_snes), `SNESSetNPC()`, `SNESGetNPC()`
5559 @*/
5560 PetscErrorCode SNESHasNPC(SNES snes, PetscBool *has_npc)
5561 {
5562   PetscFunctionBegin;
5563   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5564   *has_npc = (PetscBool)(snes->npc ? PETSC_TRUE : PETSC_FALSE);
5565   PetscFunctionReturn(PETSC_SUCCESS);
5566 }
5567 
5568 /*@
5569     SNESSetNPCSide - Sets the preconditioning side.
5570 
5571     Logically Collective
5572 
5573     Input Parameter:
5574 .   snes - iterative context obtained from `SNESCreate()`
5575 
5576     Output Parameter:
5577 .   side - the preconditioning side, where side is one of
5578 .vb
5579       PC_LEFT - left preconditioning
5580       PC_RIGHT - right preconditioning (default for most nonlinear solvers)
5581 .ve
5582 
5583     Options Database Key:
5584 .   -snes_npc_side <right,left> - nonlinear preconditioner side
5585 
5586     Level: intermediate
5587 
5588     Note:
5589     `SNESNRICHARDSON` and `SNESNCG` only support left preconditioning.
5590 
5591 .seealso: [](ch_snes), `SNESType`, `SNESGetNPCSide()`, `KSPSetPCSide()`
5592 @*/
5593 PetscErrorCode SNESSetNPCSide(SNES snes, PCSide side)
5594 {
5595   PetscFunctionBegin;
5596   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5597   PetscValidLogicalCollectiveEnum(snes, side, 2);
5598   if (side == PC_SIDE_DEFAULT) side = PC_RIGHT;
5599   PetscCheck((side == PC_LEFT) || (side == PC_RIGHT), PetscObjectComm((PetscObject)snes), PETSC_ERR_ARG_WRONG, "Only PC_LEFT and PC_RIGHT are supported");
5600   snes->npcside = side;
5601   PetscFunctionReturn(PETSC_SUCCESS);
5602 }
5603 
5604 /*@
5605     SNESGetNPCSide - Gets the preconditioning side.
5606 
5607     Not Collective
5608 
5609     Input Parameter:
5610 .   snes - iterative context obtained from `SNESCreate()`
5611 
5612     Output Parameter:
5613 .   side - the preconditioning side, where side is one of
5614 .vb
5615       `PC_LEFT` - left preconditioning
5616       `PC_RIGHT` - right preconditioning (default for most nonlinear solvers)
5617 .ve
5618 
5619     Level: intermediate
5620 
5621 .seealso: [](ch_snes), `SNES`, `SNESSetNPCSide()`, `KSPGetPCSide()`
5622 @*/
5623 PetscErrorCode SNESGetNPCSide(SNES snes, PCSide *side)
5624 {
5625   PetscFunctionBegin;
5626   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5627   PetscValidPointer(side, 2);
5628   *side = snes->npcside;
5629   PetscFunctionReturn(PETSC_SUCCESS);
5630 }
5631 
5632 /*@
5633   SNESSetLineSearch - Sets the linesearch on the `SNES` instance.
5634 
5635   Collective
5636 
5637   Input Parameters:
5638 + snes - iterative context obtained from `SNESCreate()`
5639 - linesearch   - the linesearch object
5640 
5641   Level: developer
5642 
5643   Note:
5644   Use `SNESGetLineSearch()` to retrieve the preconditioner context (for example,
5645   to configure it using the API).
5646 
5647 .seealso: [](ch_snes), `SNESGetLineSearch()`
5648 @*/
5649 PetscErrorCode SNESSetLineSearch(SNES snes, SNESLineSearch linesearch)
5650 {
5651   PetscFunctionBegin;
5652   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5653   PetscValidHeaderSpecific(linesearch, SNESLINESEARCH_CLASSID, 2);
5654   PetscCheckSameComm(snes, 1, linesearch, 2);
5655   PetscCall(PetscObjectReference((PetscObject)linesearch));
5656   PetscCall(SNESLineSearchDestroy(&snes->linesearch));
5657 
5658   snes->linesearch = linesearch;
5659 
5660   PetscFunctionReturn(PETSC_SUCCESS);
5661 }
5662 
5663 /*@
5664   SNESGetLineSearch - Returns the line search context set with `SNESSetLineSearch()`
5665   or creates a default line search instance associated with the `SNES` and returns it.
5666 
5667   Not Collective
5668 
5669   Input Parameter:
5670 . snes - iterative context obtained from `SNESCreate()`
5671 
5672   Output Parameter:
5673 . linesearch - linesearch context
5674 
5675   Level: beginner
5676 
5677 .seealso: [](ch_snes), `SNESLineSearch`, `SNESSetLineSearch()`, `SNESLineSearchCreate()`
5678 @*/
5679 PetscErrorCode SNESGetLineSearch(SNES snes, SNESLineSearch *linesearch)
5680 {
5681   const char *optionsprefix;
5682 
5683   PetscFunctionBegin;
5684   PetscValidHeaderSpecific(snes, SNES_CLASSID, 1);
5685   PetscValidPointer(linesearch, 2);
5686   if (!snes->linesearch) {
5687     PetscCall(SNESGetOptionsPrefix(snes, &optionsprefix));
5688     PetscCall(SNESLineSearchCreate(PetscObjectComm((PetscObject)snes), &snes->linesearch));
5689     PetscCall(SNESLineSearchSetSNES(snes->linesearch, snes));
5690     PetscCall(SNESLineSearchAppendOptionsPrefix(snes->linesearch, optionsprefix));
5691     PetscCall(PetscObjectIncrementTabLevel((PetscObject)snes->linesearch, (PetscObject)snes, 1));
5692   }
5693   *linesearch = snes->linesearch;
5694   PetscFunctionReturn(PETSC_SUCCESS);
5695 }
5696