1c4762a1bSJed Brown static const char help[] = "p-Bratu nonlinear PDE in 2d.\n\ 2c4762a1bSJed Brown We solve the p-Laplacian (nonlinear diffusion) combined with\n\ 3c4762a1bSJed Brown the Bratu (solid fuel ignition) nonlinearity in a 2D rectangular\n\ 4c4762a1bSJed Brown domain, using distributed arrays (DAs) to partition the parallel grid.\n\ 5c4762a1bSJed Brown The command line options include:\n\ 6c4762a1bSJed Brown -p <2>: `p' in p-Laplacian term\n\ 7c4762a1bSJed Brown -epsilon <1e-05>: Strain-regularization in p-Laplacian\n\ 8c4762a1bSJed Brown -lambda <6>: Bratu parameter\n\ 9c4762a1bSJed Brown -blocks <bx,by>: number of coefficient interfaces in x and y direction\n\ 10c4762a1bSJed Brown -kappa <1e-3>: diffusivity in odd regions\n\ 11c4762a1bSJed Brown \n"; 12c4762a1bSJed Brown 13c4762a1bSJed Brown 14c4762a1bSJed Brown /*F 15c4762a1bSJed Brown The $p$-Bratu problem is a combination of the $p$-Laplacian (nonlinear diffusion) and the Brutu solid fuel ignition problem. 16c4762a1bSJed Brown This problem is modeled by the partial differential equation 17c4762a1bSJed Brown 18c4762a1bSJed Brown \begin{equation*} 19c4762a1bSJed Brown -\nabla\cdot (\eta \nabla u) - \lambda \exp(u) = 0 20c4762a1bSJed Brown \end{equation*} 21c4762a1bSJed Brown 22c4762a1bSJed Brown on $\Omega = (-1,1)^2$ with closure 23c4762a1bSJed Brown 24c4762a1bSJed Brown \begin{align*} 25c4762a1bSJed Brown \eta(\gamma) &= (\epsilon^2 + \gamma)^{(p-2)/2} & \gamma &= \frac 1 2 |\nabla u|^2 26c4762a1bSJed Brown \end{align*} 27c4762a1bSJed Brown 28c4762a1bSJed Brown and boundary conditions $u = 0$ for $(x,y) \in \partial \Omega$ 29c4762a1bSJed Brown 30c4762a1bSJed Brown A 9-point finite difference stencil is used to discretize 31c4762a1bSJed Brown the boundary value problem to obtain a nonlinear system of equations. 32c4762a1bSJed Brown This would be a 5-point stencil if not for the $p$-Laplacian's nonlinearity. 33c4762a1bSJed Brown F*/ 34c4762a1bSJed Brown 35c4762a1bSJed Brown /* 36c4762a1bSJed Brown mpiexec -n 2 ./ex15 -snes_monitor -ksp_monitor log_summary 37c4762a1bSJed Brown */ 38c4762a1bSJed Brown 39c4762a1bSJed Brown /* 40c4762a1bSJed Brown Include "petscdmda.h" so that we can use distributed arrays (DMDAs). 41c4762a1bSJed Brown Include "petscsnes.h" so that we can use SNES solvers. Note that this 42c4762a1bSJed Brown file automatically includes: 43c4762a1bSJed Brown petsc.h - base PETSc routines petscvec.h - vectors 44c4762a1bSJed Brown petscsys.h - system routines petscmat.h - matrices 45c4762a1bSJed Brown petscis.h - index sets petscksp.h - Krylov subspace methods 46c4762a1bSJed Brown petscviewer.h - viewers petscpc.h - preconditioners 47c4762a1bSJed Brown petscksp.h - linear solvers 48c4762a1bSJed Brown */ 49c4762a1bSJed Brown 50c4762a1bSJed Brown #include <petscdm.h> 51c4762a1bSJed Brown #include <petscdmda.h> 52c4762a1bSJed Brown #include <petscsnes.h> 53c4762a1bSJed Brown 54c4762a1bSJed Brown typedef enum {JAC_BRATU,JAC_PICARD,JAC_STAR,JAC_NEWTON} JacType; 55c4762a1bSJed Brown static const char *const JacTypes[] = {"BRATU","PICARD","STAR","NEWTON","JacType","JAC_",0}; 56c4762a1bSJed Brown 57c4762a1bSJed Brown /* 58c4762a1bSJed Brown User-defined application context - contains data needed by the 59c4762a1bSJed Brown application-provided call-back routines, FormJacobianLocal() and 60c4762a1bSJed Brown FormFunctionLocal(). 61c4762a1bSJed Brown */ 62c4762a1bSJed Brown typedef struct { 63c4762a1bSJed Brown PetscReal lambda; /* Bratu parameter */ 64c4762a1bSJed Brown PetscReal p; /* Exponent in p-Laplacian */ 65c4762a1bSJed Brown PetscReal epsilon; /* Regularization */ 66c4762a1bSJed Brown PetscReal source; /* Source term */ 67c4762a1bSJed Brown JacType jtype; /* What type of Jacobian to assemble */ 68c4762a1bSJed Brown PetscBool picard; 69c4762a1bSJed Brown PetscInt blocks[2]; 70c4762a1bSJed Brown PetscReal kappa; 71c4762a1bSJed Brown PetscInt initial; /* initial conditions type */ 72c4762a1bSJed Brown } AppCtx; 73c4762a1bSJed Brown 74c4762a1bSJed Brown /* 75c4762a1bSJed Brown User-defined routines 76c4762a1bSJed Brown */ 77c4762a1bSJed Brown static PetscErrorCode FormRHS(AppCtx*,DM,Vec); 78c4762a1bSJed Brown static PetscErrorCode FormInitialGuess(AppCtx*,DM,Vec); 79c4762a1bSJed Brown static PetscErrorCode FormFunctionLocal(DMDALocalInfo*,PetscScalar**,PetscScalar**,AppCtx*); 80c4762a1bSJed Brown static PetscErrorCode FormFunctionPicardLocal(DMDALocalInfo*,PetscScalar**,PetscScalar**,AppCtx*); 81c4762a1bSJed Brown static PetscErrorCode FormJacobianLocal(DMDALocalInfo*,PetscScalar**,Mat,Mat,AppCtx*); 82c4762a1bSJed Brown static PetscErrorCode NonlinearGS(SNES,Vec,Vec,void*); 83c4762a1bSJed Brown 84c4762a1bSJed Brown typedef struct _n_PreCheck *PreCheck; 85c4762a1bSJed Brown struct _n_PreCheck { 86c4762a1bSJed Brown MPI_Comm comm; 87c4762a1bSJed Brown PetscReal angle; 88c4762a1bSJed Brown Vec Ylast; 89c4762a1bSJed Brown PetscViewer monitor; 90c4762a1bSJed Brown }; 91c4762a1bSJed Brown PetscErrorCode PreCheckCreate(MPI_Comm,PreCheck*); 92c4762a1bSJed Brown PetscErrorCode PreCheckDestroy(PreCheck*); 93c4762a1bSJed Brown PetscErrorCode PreCheckFunction(SNESLineSearch,Vec,Vec,PetscBool*,void*); 94c4762a1bSJed Brown PetscErrorCode PreCheckSetFromOptions(PreCheck); 95c4762a1bSJed Brown 96c4762a1bSJed Brown int main(int argc,char **argv) 97c4762a1bSJed Brown { 98c4762a1bSJed Brown SNES snes; /* nonlinear solver */ 99c4762a1bSJed Brown Vec x,r,b; /* solution, residual, rhs vectors */ 100c4762a1bSJed Brown Mat A,B; /* Jacobian and preconditioning matrices */ 101c4762a1bSJed Brown AppCtx user; /* user-defined work context */ 102c4762a1bSJed Brown PetscInt its; /* iterations for convergence */ 103c4762a1bSJed Brown SNESConvergedReason reason; /* Check convergence */ 104c4762a1bSJed Brown PetscBool alloc_star; /* Only allocate for the STAR stencil */ 105c4762a1bSJed Brown PetscBool write_output; 106c4762a1bSJed Brown char filename[PETSC_MAX_PATH_LEN] = "ex15.vts"; 107c4762a1bSJed Brown PetscReal bratu_lambda_max = 6.81,bratu_lambda_min = 0.; 108c4762a1bSJed Brown DM da,dastar; /* distributed array data structure */ 109c4762a1bSJed Brown PreCheck precheck = NULL; /* precheck context for version in this file */ 110c4762a1bSJed Brown PetscInt use_precheck; /* 0=none, 1=version in this file, 2=SNES-provided version */ 111c4762a1bSJed Brown PetscReal precheck_angle; /* When manually setting the SNES-provided precheck function */ 112c4762a1bSJed Brown PetscErrorCode ierr; 113c4762a1bSJed Brown SNESLineSearch linesearch; 114c4762a1bSJed Brown 115c4762a1bSJed Brown /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 116c4762a1bSJed Brown Initialize program 117c4762a1bSJed Brown - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */ 118c4762a1bSJed Brown 119c4762a1bSJed Brown ierr = PetscInitialize(&argc,&argv,(char*)0,help);if (ierr) return ierr; 120c4762a1bSJed Brown 121c4762a1bSJed Brown /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 122c4762a1bSJed Brown Initialize problem parameters 123c4762a1bSJed Brown - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */ 124c4762a1bSJed Brown user.lambda = 0.0; user.p = 2.0; user.epsilon = 1e-5; user.source = 0.1; user.jtype = JAC_NEWTON;user.initial=-1; 125c4762a1bSJed Brown user.blocks[0] = 1; user.blocks[1] = 1; user.kappa = 1e-3; 126c4762a1bSJed Brown alloc_star = PETSC_FALSE; 127c4762a1bSJed Brown use_precheck = 0; precheck_angle = 10.; 128c4762a1bSJed Brown user.picard = PETSC_FALSE; 129c4762a1bSJed Brown ierr = PetscOptionsBegin(PETSC_COMM_WORLD,NULL,"p-Bratu options",__FILE__);CHKERRQ(ierr); 130c4762a1bSJed Brown { 131c4762a1bSJed Brown PetscInt two=2; 132c4762a1bSJed Brown ierr = PetscOptionsReal("-lambda","Bratu parameter","",user.lambda,&user.lambda,NULL);CHKERRQ(ierr); 133c4762a1bSJed Brown ierr = PetscOptionsReal("-p","Exponent `p' in p-Laplacian","",user.p,&user.p,NULL);CHKERRQ(ierr); 134c4762a1bSJed Brown ierr = PetscOptionsReal("-epsilon","Strain-regularization in p-Laplacian","",user.epsilon,&user.epsilon,NULL);CHKERRQ(ierr); 135c4762a1bSJed Brown ierr = PetscOptionsReal("-source","Constant source term","",user.source,&user.source,NULL);CHKERRQ(ierr); 136c4762a1bSJed Brown ierr = PetscOptionsEnum("-jtype","Jacobian approximation to assemble","",JacTypes,(PetscEnum)user.jtype,(PetscEnum*)&user.jtype,NULL);CHKERRQ(ierr); 137c4762a1bSJed Brown ierr = PetscOptionsName("-picard","Solve with defect-correction Picard iteration","",&user.picard);CHKERRQ(ierr); 138c4762a1bSJed Brown if (user.picard) {user.jtype = JAC_PICARD; user.p = 3;} 139c4762a1bSJed Brown ierr = PetscOptionsBool("-alloc_star","Allocate for STAR stencil (5-point)","",alloc_star,&alloc_star,NULL);CHKERRQ(ierr); 140c4762a1bSJed Brown ierr = PetscOptionsInt("-precheck","Use a pre-check correction intended for use with Picard iteration 1=this version, 2=library","",use_precheck,&use_precheck,NULL);CHKERRQ(ierr); 141c4762a1bSJed Brown ierr = PetscOptionsInt("-initial","Initial conditions type (-1: default, 0: zero-valued, 1: peaked guess)","",user.initial,&user.initial,NULL);CHKERRQ(ierr); 142c4762a1bSJed Brown if (use_precheck == 2) { /* Using library version, get the angle */ 143c4762a1bSJed Brown ierr = PetscOptionsReal("-precheck_angle","Angle in degrees between successive search directions necessary to activate step correction","",precheck_angle,&precheck_angle,NULL);CHKERRQ(ierr); 144c4762a1bSJed Brown } 145c4762a1bSJed Brown ierr = PetscOptionsIntArray("-blocks","number of coefficient interfaces in x and y direction","",user.blocks,&two,NULL);CHKERRQ(ierr); 146c4762a1bSJed Brown ierr = PetscOptionsReal("-kappa","diffusivity in odd regions","",user.kappa,&user.kappa,NULL);CHKERRQ(ierr); 147c4762a1bSJed Brown ierr = PetscOptionsString("-o","Output solution in vts format","",filename,filename,sizeof(filename),&write_output);CHKERRQ(ierr); 148c4762a1bSJed Brown } 149c4762a1bSJed Brown ierr = PetscOptionsEnd();CHKERRQ(ierr); 150c4762a1bSJed Brown if (user.lambda > bratu_lambda_max || user.lambda < bratu_lambda_min) { 151c4762a1bSJed Brown ierr = PetscPrintf(PETSC_COMM_WORLD,"WARNING: lambda %g out of range for p=2\n",(double)user.lambda);CHKERRQ(ierr); 152c4762a1bSJed Brown } 153c4762a1bSJed Brown 154c4762a1bSJed Brown /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 155c4762a1bSJed Brown Create nonlinear solver context 156c4762a1bSJed Brown - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */ 157c4762a1bSJed Brown ierr = SNESCreate(PETSC_COMM_WORLD,&snes);CHKERRQ(ierr); 158c4762a1bSJed Brown 159c4762a1bSJed Brown /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 160c4762a1bSJed Brown Create distributed array (DMDA) to manage parallel grid and vectors 161c4762a1bSJed Brown - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */ 162c4762a1bSJed Brown ierr = DMDACreate2d(PETSC_COMM_WORLD,DM_BOUNDARY_NONE,DM_BOUNDARY_NONE,DMDA_STENCIL_BOX,4,4,PETSC_DECIDE,PETSC_DECIDE,1,1,NULL,NULL,&da);CHKERRQ(ierr); 163c4762a1bSJed Brown ierr = DMSetFromOptions(da);CHKERRQ(ierr); 164c4762a1bSJed Brown ierr = DMSetUp(da);CHKERRQ(ierr); 165c4762a1bSJed Brown ierr = DMDACreate2d(PETSC_COMM_WORLD,DM_BOUNDARY_NONE,DM_BOUNDARY_NONE,DMDA_STENCIL_STAR,4,4,PETSC_DECIDE,PETSC_DECIDE,1,1,NULL,NULL,&dastar);CHKERRQ(ierr); 166c4762a1bSJed Brown ierr = DMSetFromOptions(dastar);CHKERRQ(ierr); 167c4762a1bSJed Brown ierr = DMSetUp(dastar);CHKERRQ(ierr); 168c4762a1bSJed Brown 169c4762a1bSJed Brown /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 170c4762a1bSJed Brown Extract global vectors from DM; then duplicate for remaining 171c4762a1bSJed Brown vectors that are the same types 172c4762a1bSJed Brown - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */ 173c4762a1bSJed Brown ierr = DMCreateGlobalVector(da,&x);CHKERRQ(ierr); 174c4762a1bSJed Brown ierr = VecDuplicate(x,&r);CHKERRQ(ierr); 175c4762a1bSJed Brown ierr = VecDuplicate(x,&b);CHKERRQ(ierr); 176c4762a1bSJed Brown 177c4762a1bSJed Brown /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 178c4762a1bSJed Brown Create matrix data structure; set Jacobian evaluation routine 179c4762a1bSJed Brown 180c4762a1bSJed Brown Set Jacobian matrix data structure and default Jacobian evaluation 181c4762a1bSJed Brown routine. User can override with: 182c4762a1bSJed Brown -snes_mf : matrix-free Newton-Krylov method with no preconditioning 183c4762a1bSJed Brown (unless user explicitly sets preconditioner) 184c4762a1bSJed Brown -snes_mf_operator : form preconditioning matrix as set by the user, 185c4762a1bSJed Brown but use matrix-free approx for Jacobian-vector 186c4762a1bSJed Brown products within Newton-Krylov method 187c4762a1bSJed Brown 188c4762a1bSJed Brown - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */ 189c4762a1bSJed Brown /* B can be type of MATAIJ,MATBAIJ or MATSBAIJ */ 190c4762a1bSJed Brown ierr = DMCreateMatrix(alloc_star ? dastar : da,&B);CHKERRQ(ierr); 191c4762a1bSJed Brown A = B; 192c4762a1bSJed Brown 193c4762a1bSJed Brown /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 194c4762a1bSJed Brown Set local function evaluation routine 195c4762a1bSJed Brown - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */ 196c4762a1bSJed Brown ierr = DMSetApplicationContext(da, &user);CHKERRQ(ierr); 197c4762a1bSJed Brown ierr = SNESSetDM(snes,da);CHKERRQ(ierr); 198c4762a1bSJed Brown if (user.picard) { 199c4762a1bSJed Brown /* 200c4762a1bSJed Brown This is not really right requiring the user to call SNESSetFunction/Jacobian but the DMDASNESSetPicardLocal() cannot access 201c4762a1bSJed Brown the SNES to set it 202c4762a1bSJed Brown */ 203c4762a1bSJed Brown ierr = DMDASNESSetPicardLocal(da,INSERT_VALUES,(PetscErrorCode (*)(DMDALocalInfo*,void*,void*,void*))FormFunctionPicardLocal, 204c4762a1bSJed Brown (PetscErrorCode (*)(DMDALocalInfo*,void*,Mat,Mat,void*))FormJacobianLocal,&user);CHKERRQ(ierr); 205c4762a1bSJed Brown ierr = SNESSetFunction(snes,NULL,SNESPicardComputeFunction,&user);CHKERRQ(ierr); 206c4762a1bSJed Brown ierr = SNESSetJacobian(snes,NULL,NULL,SNESPicardComputeJacobian,&user);CHKERRQ(ierr); 207c4762a1bSJed Brown } else { 208c4762a1bSJed Brown ierr = DMDASNESSetFunctionLocal(da,INSERT_VALUES,(PetscErrorCode (*)(DMDALocalInfo*,void*,void*,void*))FormFunctionLocal,&user);CHKERRQ(ierr); 209c4762a1bSJed Brown ierr = DMDASNESSetJacobianLocal(da,(PetscErrorCode (*)(DMDALocalInfo*,void*,Mat,Mat,void*))FormJacobianLocal,&user);CHKERRQ(ierr); 210c4762a1bSJed Brown } 211c4762a1bSJed Brown 212c4762a1bSJed Brown 213c4762a1bSJed Brown /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 214c4762a1bSJed Brown Customize nonlinear solver; set runtime options 215c4762a1bSJed Brown - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */ 216c4762a1bSJed Brown ierr = SNESSetFromOptions(snes);CHKERRQ(ierr); 217c4762a1bSJed Brown ierr = SNESSetNGS(snes,NonlinearGS,&user);CHKERRQ(ierr); 218c4762a1bSJed Brown ierr = SNESGetLineSearch(snes, &linesearch);CHKERRQ(ierr); 219c4762a1bSJed Brown /* Set up the precheck context if requested */ 220c4762a1bSJed Brown if (use_precheck == 1) { /* Use the precheck routines in this file */ 221c4762a1bSJed Brown ierr = PreCheckCreate(PETSC_COMM_WORLD,&precheck);CHKERRQ(ierr); 222c4762a1bSJed Brown ierr = PreCheckSetFromOptions(precheck);CHKERRQ(ierr); 223c4762a1bSJed Brown ierr = SNESLineSearchSetPreCheck(linesearch,PreCheckFunction,precheck);CHKERRQ(ierr); 224c4762a1bSJed Brown } else if (use_precheck == 2) { /* Use the version provided by the library */ 225c4762a1bSJed Brown ierr = SNESLineSearchSetPreCheck(linesearch,SNESLineSearchPreCheckPicard,&precheck_angle);CHKERRQ(ierr); 226c4762a1bSJed Brown } 227c4762a1bSJed Brown 228c4762a1bSJed Brown /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 229c4762a1bSJed Brown Evaluate initial guess 230c4762a1bSJed Brown Note: The user should initialize the vector, x, with the initial guess 231c4762a1bSJed Brown for the nonlinear solver prior to calling SNESSolve(). In particular, 232c4762a1bSJed Brown to employ an initial guess of zero, the user should explicitly set 233c4762a1bSJed Brown this vector to zero by calling VecSet(). 234c4762a1bSJed Brown */ 235c4762a1bSJed Brown 236c4762a1bSJed Brown ierr = FormInitialGuess(&user,da,x);CHKERRQ(ierr); 237c4762a1bSJed Brown ierr = FormRHS(&user,da,b);CHKERRQ(ierr); 238c4762a1bSJed Brown 239c4762a1bSJed Brown /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 240c4762a1bSJed Brown Solve nonlinear system 241c4762a1bSJed Brown - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */ 242c4762a1bSJed Brown ierr = SNESSolve(snes,b,x);CHKERRQ(ierr); 243c4762a1bSJed Brown ierr = SNESGetIterationNumber(snes,&its);CHKERRQ(ierr); 244c4762a1bSJed Brown ierr = SNESGetConvergedReason(snes,&reason);CHKERRQ(ierr); 245c4762a1bSJed Brown 246c4762a1bSJed Brown ierr = PetscPrintf(PETSC_COMM_WORLD,"%s Number of nonlinear iterations = %D\n",SNESConvergedReasons[reason],its);CHKERRQ(ierr); 247c4762a1bSJed Brown 248c4762a1bSJed Brown if (write_output) { 249c4762a1bSJed Brown PetscViewer viewer; 250c4762a1bSJed Brown ierr = PetscViewerVTKOpen(PETSC_COMM_WORLD,filename,FILE_MODE_WRITE,&viewer);CHKERRQ(ierr); 251c4762a1bSJed Brown ierr = VecView(x,viewer);CHKERRQ(ierr); 252c4762a1bSJed Brown ierr = PetscViewerDestroy(&viewer);CHKERRQ(ierr); 253c4762a1bSJed Brown } 254c4762a1bSJed Brown 255c4762a1bSJed Brown /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 256c4762a1bSJed Brown Free work space. All PETSc objects should be destroyed when they 257c4762a1bSJed Brown are no longer needed. 258c4762a1bSJed Brown - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */ 259c4762a1bSJed Brown 260c4762a1bSJed Brown if (A != B) { 261c4762a1bSJed Brown ierr = MatDestroy(&A);CHKERRQ(ierr); 262c4762a1bSJed Brown } 263c4762a1bSJed Brown ierr = MatDestroy(&B);CHKERRQ(ierr); 264c4762a1bSJed Brown ierr = VecDestroy(&x);CHKERRQ(ierr); 265c4762a1bSJed Brown ierr = VecDestroy(&r);CHKERRQ(ierr); 266c4762a1bSJed Brown ierr = VecDestroy(&b);CHKERRQ(ierr); 267c4762a1bSJed Brown ierr = SNESDestroy(&snes);CHKERRQ(ierr); 268c4762a1bSJed Brown ierr = DMDestroy(&da);CHKERRQ(ierr); 269c4762a1bSJed Brown ierr = DMDestroy(&dastar);CHKERRQ(ierr); 270c4762a1bSJed Brown ierr = PreCheckDestroy(&precheck);CHKERRQ(ierr); 271c4762a1bSJed Brown ierr = PetscFinalize(); 272c4762a1bSJed Brown return ierr; 273c4762a1bSJed Brown } 274c4762a1bSJed Brown 275c4762a1bSJed Brown /* ------------------------------------------------------------------- */ 276c4762a1bSJed Brown /* 277c4762a1bSJed Brown FormInitialGuess - Forms initial approximation. 278c4762a1bSJed Brown 279c4762a1bSJed Brown Input Parameters: 280c4762a1bSJed Brown user - user-defined application context 281c4762a1bSJed Brown X - vector 282c4762a1bSJed Brown 283c4762a1bSJed Brown Output Parameter: 284c4762a1bSJed Brown X - vector 285c4762a1bSJed Brown */ 286c4762a1bSJed Brown static PetscErrorCode FormInitialGuess(AppCtx *user,DM da,Vec X) 287c4762a1bSJed Brown { 288c4762a1bSJed Brown PetscInt i,j,Mx,My,xs,ys,xm,ym; 289c4762a1bSJed Brown PetscErrorCode ierr; 290c4762a1bSJed Brown PetscReal temp1,temp,hx,hy; 291c4762a1bSJed Brown PetscScalar **x; 292c4762a1bSJed Brown 293c4762a1bSJed Brown PetscFunctionBeginUser; 294c4762a1bSJed Brown ierr = DMDAGetInfo(da,PETSC_IGNORE,&Mx,&My,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE);CHKERRQ(ierr); 295c4762a1bSJed Brown 296c4762a1bSJed Brown hx = 1.0/(PetscReal)(Mx-1); 297c4762a1bSJed Brown hy = 1.0/(PetscReal)(My-1); 298c4762a1bSJed Brown temp1 = user->lambda / (user->lambda + 1.); 299c4762a1bSJed Brown 300c4762a1bSJed Brown /* 301c4762a1bSJed Brown Get a pointer to vector data. 302c4762a1bSJed Brown - For default PETSc vectors, VecGetArray() returns a pointer to 303c4762a1bSJed Brown the data array. Otherwise, the routine is implementation dependent. 304c4762a1bSJed Brown - You MUST call VecRestoreArray() when you no longer need access to 305c4762a1bSJed Brown the array. 306c4762a1bSJed Brown */ 307c4762a1bSJed Brown ierr = DMDAVecGetArray(da,X,&x);CHKERRQ(ierr); 308c4762a1bSJed Brown 309c4762a1bSJed Brown /* 310c4762a1bSJed Brown Get local grid boundaries (for 2-dimensional DA): 311c4762a1bSJed Brown xs, ys - starting grid indices (no ghost points) 312c4762a1bSJed Brown xm, ym - widths of local grid (no ghost points) 313c4762a1bSJed Brown 314c4762a1bSJed Brown */ 315c4762a1bSJed Brown ierr = DMDAGetCorners(da,&xs,&ys,NULL,&xm,&ym,NULL);CHKERRQ(ierr); 316c4762a1bSJed Brown 317c4762a1bSJed Brown /* 318c4762a1bSJed Brown Compute initial guess over the locally owned part of the grid 319c4762a1bSJed Brown */ 320c4762a1bSJed Brown for (j=ys; j<ys+ym; j++) { 321c4762a1bSJed Brown temp = (PetscReal)(PetscMin(j,My-j-1))*hy; 322c4762a1bSJed Brown for (i=xs; i<xs+xm; i++) { 323c4762a1bSJed Brown if (i == 0 || j == 0 || i == Mx-1 || j == My-1) { 324c4762a1bSJed Brown /* boundary conditions are all zero Dirichlet */ 325c4762a1bSJed Brown x[j][i] = 0.0; 326c4762a1bSJed Brown } else { 327c4762a1bSJed Brown if (user->initial == -1) { 328c4762a1bSJed Brown if (user->lambda != 0) { 329c4762a1bSJed Brown x[j][i] = temp1*PetscSqrtReal(PetscMin((PetscReal)(PetscMin(i,Mx-i-1))*hx,temp)); 330c4762a1bSJed Brown } else { 331c4762a1bSJed Brown /* The solution above is an exact solution for lambda=0, this avoids "accidentally" starting 332c4762a1bSJed Brown * with an exact solution. */ 333c4762a1bSJed Brown const PetscReal 334c4762a1bSJed Brown xx = 2*(PetscReal)i/(Mx-1) - 1, 335c4762a1bSJed Brown yy = 2*(PetscReal)j/(My-1) - 1; 336c4762a1bSJed Brown x[j][i] = (1 - xx*xx) * (1-yy*yy) * xx * yy; 337c4762a1bSJed Brown } 338c4762a1bSJed Brown } else if (user->initial == 0) { 339c4762a1bSJed Brown x[j][i] = 0.; 340c4762a1bSJed Brown } else if (user->initial == 1) { 341c4762a1bSJed Brown const PetscReal 342c4762a1bSJed Brown xx = 2*(PetscReal)i/(Mx-1) - 1, 343c4762a1bSJed Brown yy = 2*(PetscReal)j/(My-1) - 1; 344c4762a1bSJed Brown x[j][i] = (1 - xx*xx) * (1-yy*yy) * xx * yy; 345c4762a1bSJed Brown } else { 346c4762a1bSJed Brown if (user->lambda != 0) { 347c4762a1bSJed Brown x[j][i] = temp1*PetscSqrtReal(PetscMin((PetscReal)(PetscMin(i,Mx-i-1))*hx,temp)); 348c4762a1bSJed Brown } else { 349c4762a1bSJed Brown x[j][i] = 0.5*PetscSqrtReal(PetscMin((PetscReal)(PetscMin(i,Mx-i-1))*hx,temp)); 350c4762a1bSJed Brown } 351c4762a1bSJed Brown } 352c4762a1bSJed Brown } 353c4762a1bSJed Brown } 354c4762a1bSJed Brown } 355c4762a1bSJed Brown /* 356c4762a1bSJed Brown Restore vector 357c4762a1bSJed Brown */ 358c4762a1bSJed Brown ierr = DMDAVecRestoreArray(da,X,&x);CHKERRQ(ierr); 359c4762a1bSJed Brown PetscFunctionReturn(0); 360c4762a1bSJed Brown } 361c4762a1bSJed Brown 362c4762a1bSJed Brown /* 363c4762a1bSJed Brown FormRHS - Forms constant RHS for the problem. 364c4762a1bSJed Brown 365c4762a1bSJed Brown Input Parameters: 366c4762a1bSJed Brown user - user-defined application context 367c4762a1bSJed Brown B - RHS vector 368c4762a1bSJed Brown 369c4762a1bSJed Brown Output Parameter: 370c4762a1bSJed Brown B - vector 371c4762a1bSJed Brown */ 372c4762a1bSJed Brown static PetscErrorCode FormRHS(AppCtx *user,DM da,Vec B) 373c4762a1bSJed Brown { 374c4762a1bSJed Brown PetscInt i,j,Mx,My,xs,ys,xm,ym; 375c4762a1bSJed Brown PetscErrorCode ierr; 376c4762a1bSJed Brown PetscReal hx,hy; 377c4762a1bSJed Brown PetscScalar **b; 378c4762a1bSJed Brown 379c4762a1bSJed Brown PetscFunctionBeginUser; 380c4762a1bSJed Brown ierr = DMDAGetInfo(da,PETSC_IGNORE,&Mx,&My,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE);CHKERRQ(ierr); 381c4762a1bSJed Brown 382c4762a1bSJed Brown hx = 1.0/(PetscReal)(Mx-1); 383c4762a1bSJed Brown hy = 1.0/(PetscReal)(My-1); 384c4762a1bSJed Brown ierr = DMDAVecGetArray(da,B,&b);CHKERRQ(ierr); 385c4762a1bSJed Brown ierr = DMDAGetCorners(da,&xs,&ys,NULL,&xm,&ym,NULL);CHKERRQ(ierr); 386c4762a1bSJed Brown for (j=ys; j<ys+ym; j++) { 387c4762a1bSJed Brown for (i=xs; i<xs+xm; i++) { 388c4762a1bSJed Brown if (i == 0 || j == 0 || i == Mx-1 || j == My-1) { 389c4762a1bSJed Brown b[j][i] = 0.0; 390c4762a1bSJed Brown } else { 391c4762a1bSJed Brown b[j][i] = hx*hy*user->source; 392c4762a1bSJed Brown } 393c4762a1bSJed Brown } 394c4762a1bSJed Brown } 395c4762a1bSJed Brown ierr = DMDAVecRestoreArray(da,B,&b);CHKERRQ(ierr); 396c4762a1bSJed Brown PetscFunctionReturn(0); 397c4762a1bSJed Brown } 398c4762a1bSJed Brown 399c4762a1bSJed Brown PETSC_STATIC_INLINE PetscReal kappa(const AppCtx *ctx,PetscReal x,PetscReal y) 400c4762a1bSJed Brown { 401c4762a1bSJed Brown return (((PetscInt)(x*ctx->blocks[0])) + ((PetscInt)(y*ctx->blocks[1]))) % 2 ? ctx->kappa : 1.0; 402c4762a1bSJed Brown } 403c4762a1bSJed Brown /* p-Laplacian diffusivity */ 404c4762a1bSJed Brown PETSC_STATIC_INLINE PetscScalar eta(const AppCtx *ctx,PetscReal x,PetscReal y,PetscScalar ux,PetscScalar uy) 405c4762a1bSJed Brown { 406c4762a1bSJed Brown return kappa(ctx,x,y) * PetscPowScalar(PetscSqr(ctx->epsilon)+0.5*(ux*ux + uy*uy),0.5*(ctx->p-2.)); 407c4762a1bSJed Brown } 408c4762a1bSJed Brown PETSC_STATIC_INLINE PetscScalar deta(const AppCtx *ctx,PetscReal x,PetscReal y,PetscScalar ux,PetscScalar uy) 409c4762a1bSJed Brown { 410c4762a1bSJed Brown return (ctx->p == 2) 411c4762a1bSJed Brown ? 0 412c4762a1bSJed Brown : kappa(ctx,x,y)*PetscPowScalar(PetscSqr(ctx->epsilon)+0.5*(ux*ux + uy*uy),0.5*(ctx->p-4)) * 0.5 * (ctx->p-2.); 413c4762a1bSJed Brown } 414c4762a1bSJed Brown 415c4762a1bSJed Brown 416c4762a1bSJed Brown /* ------------------------------------------------------------------- */ 417c4762a1bSJed Brown /* 418c4762a1bSJed Brown FormFunctionLocal - Evaluates nonlinear function, F(x). 419c4762a1bSJed Brown */ 420c4762a1bSJed Brown static PetscErrorCode FormFunctionLocal(DMDALocalInfo *info,PetscScalar **x,PetscScalar **f,AppCtx *user) 421c4762a1bSJed Brown { 422c4762a1bSJed Brown PetscReal hx,hy,dhx,dhy,sc; 423c4762a1bSJed Brown PetscInt i,j; 424c4762a1bSJed Brown PetscScalar eu; 425c4762a1bSJed Brown PetscErrorCode ierr; 426c4762a1bSJed Brown 427c4762a1bSJed Brown 428c4762a1bSJed Brown PetscFunctionBeginUser; 429c4762a1bSJed Brown hx = 1.0/(PetscReal)(info->mx-1); 430c4762a1bSJed Brown hy = 1.0/(PetscReal)(info->my-1); 431c4762a1bSJed Brown sc = hx*hy*user->lambda; 432c4762a1bSJed Brown dhx = 1/hx; 433c4762a1bSJed Brown dhy = 1/hy; 434c4762a1bSJed Brown /* 435c4762a1bSJed Brown Compute function over the locally owned part of the grid 436c4762a1bSJed Brown */ 437c4762a1bSJed Brown for (j=info->ys; j<info->ys+info->ym; j++) { 438c4762a1bSJed Brown for (i=info->xs; i<info->xs+info->xm; i++) { 439c4762a1bSJed Brown PetscReal xx = i*hx,yy = j*hy; 440c4762a1bSJed Brown if (i == 0 || j == 0 || i == info->mx-1 || j == info->my-1) { 441c4762a1bSJed Brown f[j][i] = x[j][i]; 442c4762a1bSJed Brown } else { 443c4762a1bSJed Brown const PetscScalar 444c4762a1bSJed Brown u = x[j][i], 445c4762a1bSJed Brown ux_E = dhx*(x[j][i+1]-x[j][i]), 446c4762a1bSJed Brown uy_E = 0.25*dhy*(x[j+1][i]+x[j+1][i+1]-x[j-1][i]-x[j-1][i+1]), 447c4762a1bSJed Brown ux_W = dhx*(x[j][i]-x[j][i-1]), 448c4762a1bSJed Brown uy_W = 0.25*dhy*(x[j+1][i-1]+x[j+1][i]-x[j-1][i-1]-x[j-1][i]), 449c4762a1bSJed Brown ux_N = 0.25*dhx*(x[j][i+1]+x[j+1][i+1]-x[j][i-1]-x[j+1][i-1]), 450c4762a1bSJed Brown uy_N = dhy*(x[j+1][i]-x[j][i]), 451c4762a1bSJed Brown ux_S = 0.25*dhx*(x[j-1][i+1]+x[j][i+1]-x[j-1][i-1]-x[j][i-1]), 452c4762a1bSJed Brown uy_S = dhy*(x[j][i]-x[j-1][i]), 453c4762a1bSJed Brown e_E = eta(user,xx,yy,ux_E,uy_E), 454c4762a1bSJed Brown e_W = eta(user,xx,yy,ux_W,uy_W), 455c4762a1bSJed Brown e_N = eta(user,xx,yy,ux_N,uy_N), 456c4762a1bSJed Brown e_S = eta(user,xx,yy,ux_S,uy_S), 457c4762a1bSJed Brown uxx = -hy * (e_E*ux_E - e_W*ux_W), 458c4762a1bSJed Brown uyy = -hx * (e_N*uy_N - e_S*uy_S); 459c4762a1bSJed Brown if (sc) eu = PetscExpScalar(u); 460c4762a1bSJed Brown else eu = 0.; 461c4762a1bSJed Brown /** For p=2, these terms decay to: 462c4762a1bSJed Brown * uxx = (2.0*u - x[j][i-1] - x[j][i+1])*hydhx 463c4762a1bSJed Brown * uyy = (2.0*u - x[j-1][i] - x[j+1][i])*hxdhy 464c4762a1bSJed Brown **/ 465c4762a1bSJed Brown f[j][i] = uxx + uyy - sc*eu; 466c4762a1bSJed Brown } 467c4762a1bSJed Brown } 468c4762a1bSJed Brown } 469c4762a1bSJed Brown ierr = PetscLogFlops(info->xm*info->ym*(72.0));CHKERRQ(ierr); 470c4762a1bSJed Brown PetscFunctionReturn(0); 471c4762a1bSJed Brown } 472c4762a1bSJed Brown 473c4762a1bSJed Brown /* 474c4762a1bSJed Brown This is the opposite sign of the part of FormFunctionLocal that excludes the A(x) x part of the operation, 475c4762a1bSJed Brown that is FormFunction applies A(x) x - b(x) while this applies b(x) because for Picard we think of it as solving A(x) x = b(x) 476c4762a1bSJed Brown 477c4762a1bSJed Brown */ 478c4762a1bSJed Brown static PetscErrorCode FormFunctionPicardLocal(DMDALocalInfo *info,PetscScalar **x,PetscScalar **f,AppCtx *user) 479c4762a1bSJed Brown { 480c4762a1bSJed Brown PetscReal hx,hy,sc; 481c4762a1bSJed Brown PetscInt i,j; 482c4762a1bSJed Brown PetscErrorCode ierr; 483c4762a1bSJed Brown 484c4762a1bSJed Brown PetscFunctionBeginUser; 485c4762a1bSJed Brown hx = 1.0/(PetscReal)(info->mx-1); 486c4762a1bSJed Brown hy = 1.0/(PetscReal)(info->my-1); 487c4762a1bSJed Brown sc = hx*hy*user->lambda; 488c4762a1bSJed Brown /* 489c4762a1bSJed Brown Compute function over the locally owned part of the grid 490c4762a1bSJed Brown */ 491c4762a1bSJed Brown for (j=info->ys; j<info->ys+info->ym; j++) { 492c4762a1bSJed Brown for (i=info->xs; i<info->xs+info->xm; i++) { 493c4762a1bSJed Brown if (!(i == 0 || j == 0 || i == info->mx-1 || j == info->my-1)) { 494c4762a1bSJed Brown const PetscScalar u = x[j][i]; 495c4762a1bSJed Brown f[j][i] = sc*PetscExpScalar(u); 496c4762a1bSJed Brown } 497c4762a1bSJed Brown } 498c4762a1bSJed Brown } 499c4762a1bSJed Brown ierr = PetscLogFlops(info->xm*info->ym*2.0);CHKERRQ(ierr); 500c4762a1bSJed Brown PetscFunctionReturn(0); 501c4762a1bSJed Brown } 502c4762a1bSJed Brown 503c4762a1bSJed Brown /* 504c4762a1bSJed Brown FormJacobianLocal - Evaluates Jacobian matrix. 505c4762a1bSJed Brown */ 506c4762a1bSJed Brown static PetscErrorCode FormJacobianLocal(DMDALocalInfo *info,PetscScalar **x,Mat J,Mat B,AppCtx *user) 507c4762a1bSJed Brown { 508c4762a1bSJed Brown PetscErrorCode ierr; 509c4762a1bSJed Brown PetscInt i,j; 510c4762a1bSJed Brown MatStencil col[9],row; 511c4762a1bSJed Brown PetscScalar v[9]; 512c4762a1bSJed Brown PetscReal hx,hy,hxdhy,hydhx,dhx,dhy,sc; 513c4762a1bSJed Brown 514c4762a1bSJed Brown PetscFunctionBeginUser; 515c4762a1bSJed Brown hx = 1.0/(PetscReal)(info->mx-1); 516c4762a1bSJed Brown hy = 1.0/(PetscReal)(info->my-1); 517c4762a1bSJed Brown sc = hx*hy*user->lambda; 518c4762a1bSJed Brown dhx = 1/hx; 519c4762a1bSJed Brown dhy = 1/hy; 520c4762a1bSJed Brown hxdhy = hx/hy; 521c4762a1bSJed Brown hydhx = hy/hx; 522c4762a1bSJed Brown 523c4762a1bSJed Brown /* 524c4762a1bSJed Brown Compute entries for the locally owned part of the Jacobian. 525c4762a1bSJed Brown - PETSc parallel matrix formats are partitioned by 526c4762a1bSJed Brown contiguous chunks of rows across the processors. 527c4762a1bSJed Brown - Each processor needs to insert only elements that it owns 528c4762a1bSJed Brown locally (but any non-local elements will be sent to the 529c4762a1bSJed Brown appropriate processor during matrix assembly). 530c4762a1bSJed Brown - Here, we set all entries for a particular row at once. 531c4762a1bSJed Brown */ 532c4762a1bSJed Brown for (j=info->ys; j<info->ys+info->ym; j++) { 533c4762a1bSJed Brown for (i=info->xs; i<info->xs+info->xm; i++) { 534c4762a1bSJed Brown PetscReal xx = i*hx,yy = j*hy; 535c4762a1bSJed Brown row.j = j; row.i = i; 536c4762a1bSJed Brown /* boundary points */ 537c4762a1bSJed Brown if (i == 0 || j == 0 || i == info->mx-1 || j == info->my-1) { 538c4762a1bSJed Brown v[0] = 1.0; 539c4762a1bSJed Brown ierr = MatSetValuesStencil(B,1,&row,1,&row,v,INSERT_VALUES);CHKERRQ(ierr); 540c4762a1bSJed Brown } else { 541c4762a1bSJed Brown /* interior grid points */ 542c4762a1bSJed Brown const PetscScalar 543c4762a1bSJed Brown ux_E = dhx*(x[j][i+1]-x[j][i]), 544c4762a1bSJed Brown uy_E = 0.25*dhy*(x[j+1][i]+x[j+1][i+1]-x[j-1][i]-x[j-1][i+1]), 545c4762a1bSJed Brown ux_W = dhx*(x[j][i]-x[j][i-1]), 546c4762a1bSJed Brown uy_W = 0.25*dhy*(x[j+1][i-1]+x[j+1][i]-x[j-1][i-1]-x[j-1][i]), 547c4762a1bSJed Brown ux_N = 0.25*dhx*(x[j][i+1]+x[j+1][i+1]-x[j][i-1]-x[j+1][i-1]), 548c4762a1bSJed Brown uy_N = dhy*(x[j+1][i]-x[j][i]), 549c4762a1bSJed Brown ux_S = 0.25*dhx*(x[j-1][i+1]+x[j][i+1]-x[j-1][i-1]-x[j][i-1]), 550c4762a1bSJed Brown uy_S = dhy*(x[j][i]-x[j-1][i]), 551c4762a1bSJed Brown u = x[j][i], 552c4762a1bSJed Brown e_E = eta(user,xx,yy,ux_E,uy_E), 553c4762a1bSJed Brown e_W = eta(user,xx,yy,ux_W,uy_W), 554c4762a1bSJed Brown e_N = eta(user,xx,yy,ux_N,uy_N), 555c4762a1bSJed Brown e_S = eta(user,xx,yy,ux_S,uy_S), 556c4762a1bSJed Brown de_E = deta(user,xx,yy,ux_E,uy_E), 557c4762a1bSJed Brown de_W = deta(user,xx,yy,ux_W,uy_W), 558c4762a1bSJed Brown de_N = deta(user,xx,yy,ux_N,uy_N), 559c4762a1bSJed Brown de_S = deta(user,xx,yy,ux_S,uy_S), 560c4762a1bSJed Brown skew_E = de_E*ux_E*uy_E, 561c4762a1bSJed Brown skew_W = de_W*ux_W*uy_W, 562c4762a1bSJed Brown skew_N = de_N*ux_N*uy_N, 563c4762a1bSJed Brown skew_S = de_S*ux_S*uy_S, 564c4762a1bSJed Brown cross_EW = 0.25*(skew_E - skew_W), 565c4762a1bSJed Brown cross_NS = 0.25*(skew_N - skew_S), 566c4762a1bSJed Brown newt_E = e_E+de_E*PetscSqr(ux_E), 567c4762a1bSJed Brown newt_W = e_W+de_W*PetscSqr(ux_W), 568c4762a1bSJed Brown newt_N = e_N+de_N*PetscSqr(uy_N), 569c4762a1bSJed Brown newt_S = e_S+de_S*PetscSqr(uy_S); 570c4762a1bSJed Brown /* interior grid points */ 571c4762a1bSJed Brown switch (user->jtype) { 572c4762a1bSJed Brown case JAC_BRATU: 573c4762a1bSJed Brown /* Jacobian from p=2 */ 574c4762a1bSJed Brown v[0] = -hxdhy; col[0].j = j-1; col[0].i = i; 575c4762a1bSJed Brown v[1] = -hydhx; col[1].j = j; col[1].i = i-1; 576c4762a1bSJed Brown v[2] = 2.0*(hydhx + hxdhy) - sc*PetscExpScalar(u); col[2].j = row.j; col[2].i = row.i; 577c4762a1bSJed Brown v[3] = -hydhx; col[3].j = j; col[3].i = i+1; 578c4762a1bSJed Brown v[4] = -hxdhy; col[4].j = j+1; col[4].i = i; 579c4762a1bSJed Brown ierr = MatSetValuesStencil(B,1,&row,5,col,v,INSERT_VALUES);CHKERRQ(ierr); 580c4762a1bSJed Brown break; 581c4762a1bSJed Brown case JAC_PICARD: 582c4762a1bSJed Brown /* Jacobian arising from Picard linearization */ 583c4762a1bSJed Brown v[0] = -hxdhy*e_S; col[0].j = j-1; col[0].i = i; 584c4762a1bSJed Brown v[1] = -hydhx*e_W; col[1].j = j; col[1].i = i-1; 585c4762a1bSJed Brown v[2] = (e_W+e_E)*hydhx + (e_S+e_N)*hxdhy; col[2].j = row.j; col[2].i = row.i; 586c4762a1bSJed Brown v[3] = -hydhx*e_E; col[3].j = j; col[3].i = i+1; 587c4762a1bSJed Brown v[4] = -hxdhy*e_N; col[4].j = j+1; col[4].i = i; 588c4762a1bSJed Brown ierr = MatSetValuesStencil(B,1,&row,5,col,v,INSERT_VALUES);CHKERRQ(ierr); 589c4762a1bSJed Brown break; 590c4762a1bSJed Brown case JAC_STAR: 591c4762a1bSJed Brown /* Full Jacobian, but only a star stencil */ 592c4762a1bSJed Brown col[0].j = j-1; col[0].i = i; 593c4762a1bSJed Brown col[1].j = j; col[1].i = i-1; 594c4762a1bSJed Brown col[2].j = j; col[2].i = i; 595c4762a1bSJed Brown col[3].j = j; col[3].i = i+1; 596c4762a1bSJed Brown col[4].j = j+1; col[4].i = i; 597c4762a1bSJed Brown v[0] = -hxdhy*newt_S + cross_EW; 598c4762a1bSJed Brown v[1] = -hydhx*newt_W + cross_NS; 599c4762a1bSJed Brown v[2] = hxdhy*(newt_N + newt_S) + hydhx*(newt_E + newt_W) - sc*PetscExpScalar(u); 600c4762a1bSJed Brown v[3] = -hydhx*newt_E - cross_NS; 601c4762a1bSJed Brown v[4] = -hxdhy*newt_N - cross_EW; 602c4762a1bSJed Brown ierr = MatSetValuesStencil(B,1,&row,5,col,v,INSERT_VALUES);CHKERRQ(ierr); 603c4762a1bSJed Brown break; 604c4762a1bSJed Brown case JAC_NEWTON: 605c4762a1bSJed Brown /** The Jacobian is 606c4762a1bSJed Brown * 607c4762a1bSJed Brown * -div [ eta (grad u) + deta (grad u0 . grad u) grad u0 ] - (eE u0) u 608c4762a1bSJed Brown * 609c4762a1bSJed Brown **/ 610c4762a1bSJed Brown col[0].j = j-1; col[0].i = i-1; 611c4762a1bSJed Brown col[1].j = j-1; col[1].i = i; 612c4762a1bSJed Brown col[2].j = j-1; col[2].i = i+1; 613c4762a1bSJed Brown col[3].j = j; col[3].i = i-1; 614c4762a1bSJed Brown col[4].j = j; col[4].i = i; 615c4762a1bSJed Brown col[5].j = j; col[5].i = i+1; 616c4762a1bSJed Brown col[6].j = j+1; col[6].i = i-1; 617c4762a1bSJed Brown col[7].j = j+1; col[7].i = i; 618c4762a1bSJed Brown col[8].j = j+1; col[8].i = i+1; 619c4762a1bSJed Brown v[0] = -0.25*(skew_S + skew_W); 620c4762a1bSJed Brown v[1] = -hxdhy*newt_S + cross_EW; 621c4762a1bSJed Brown v[2] = 0.25*(skew_S + skew_E); 622c4762a1bSJed Brown v[3] = -hydhx*newt_W + cross_NS; 623c4762a1bSJed Brown v[4] = hxdhy*(newt_N + newt_S) + hydhx*(newt_E + newt_W) - sc*PetscExpScalar(u); 624c4762a1bSJed Brown v[5] = -hydhx*newt_E - cross_NS; 625c4762a1bSJed Brown v[6] = 0.25*(skew_N + skew_W); 626c4762a1bSJed Brown v[7] = -hxdhy*newt_N - cross_EW; 627c4762a1bSJed Brown v[8] = -0.25*(skew_N + skew_E); 628c4762a1bSJed Brown ierr = MatSetValuesStencil(B,1,&row,9,col,v,INSERT_VALUES);CHKERRQ(ierr); 629c4762a1bSJed Brown break; 630c4762a1bSJed Brown default: 631c4762a1bSJed Brown SETERRQ1(PetscObjectComm((PetscObject)info->da),PETSC_ERR_SUP,"Jacobian type %d not implemented",user->jtype); 632c4762a1bSJed Brown } 633c4762a1bSJed Brown } 634c4762a1bSJed Brown } 635c4762a1bSJed Brown } 636c4762a1bSJed Brown 637c4762a1bSJed Brown /* 638c4762a1bSJed Brown Assemble matrix, using the 2-step process: 639c4762a1bSJed Brown MatAssemblyBegin(), MatAssemblyEnd(). 640c4762a1bSJed Brown */ 641c4762a1bSJed Brown ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 642c4762a1bSJed Brown ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 643c4762a1bSJed Brown 644c4762a1bSJed Brown if (J != B) { 645c4762a1bSJed Brown ierr = MatAssemblyBegin(J,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 646c4762a1bSJed Brown ierr = MatAssemblyEnd(J,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 647c4762a1bSJed Brown } 648c4762a1bSJed Brown 649c4762a1bSJed Brown /* 650c4762a1bSJed Brown Tell the matrix we will never add a new nonzero location to the 651c4762a1bSJed Brown matrix. If we do, it will generate an error. 652c4762a1bSJed Brown */ 653c4762a1bSJed Brown if (user->jtype == JAC_NEWTON) { 654c4762a1bSJed Brown ierr = PetscLogFlops(info->xm*info->ym*(131.0));CHKERRQ(ierr); 655c4762a1bSJed Brown } 656c4762a1bSJed Brown ierr = MatSetOption(B,MAT_NEW_NONZERO_LOCATION_ERR,PETSC_TRUE);CHKERRQ(ierr); 657c4762a1bSJed Brown PetscFunctionReturn(0); 658c4762a1bSJed Brown } 659c4762a1bSJed Brown 660c4762a1bSJed Brown /*********************************************************** 661c4762a1bSJed Brown * PreCheck implementation 662c4762a1bSJed Brown ***********************************************************/ 663c4762a1bSJed Brown PetscErrorCode PreCheckSetFromOptions(PreCheck precheck) 664c4762a1bSJed Brown { 665c4762a1bSJed Brown PetscErrorCode ierr; 666c4762a1bSJed Brown PetscBool flg; 667c4762a1bSJed Brown 668c4762a1bSJed Brown PetscFunctionBeginUser; 669c4762a1bSJed Brown ierr = PetscOptionsBegin(precheck->comm,NULL,"PreCheck Options","none");CHKERRQ(ierr); 670c4762a1bSJed Brown ierr = PetscOptionsReal("-precheck_angle","Angle in degrees between successive search directions necessary to activate step correction","",precheck->angle,&precheck->angle,NULL);CHKERRQ(ierr); 671c4762a1bSJed Brown flg = PETSC_FALSE; 672c4762a1bSJed Brown ierr = PetscOptionsBool("-precheck_monitor","Monitor choices made by precheck routine","",flg,&flg,NULL);CHKERRQ(ierr); 673c4762a1bSJed Brown if (flg) { 674c4762a1bSJed Brown ierr = PetscViewerASCIIOpen(precheck->comm,"stdout",&precheck->monitor);CHKERRQ(ierr); 675c4762a1bSJed Brown } 676c4762a1bSJed Brown ierr = PetscOptionsEnd();CHKERRQ(ierr); 677c4762a1bSJed Brown PetscFunctionReturn(0); 678c4762a1bSJed Brown } 679c4762a1bSJed Brown 680c4762a1bSJed Brown /* 681c4762a1bSJed Brown Compare the direction of the current and previous step, modify the current step accordingly 682c4762a1bSJed Brown */ 683c4762a1bSJed Brown PetscErrorCode PreCheckFunction(SNESLineSearch linesearch,Vec X,Vec Y,PetscBool *changed, void *ctx) 684c4762a1bSJed Brown { 685c4762a1bSJed Brown PetscErrorCode ierr; 686c4762a1bSJed Brown PreCheck precheck; 687c4762a1bSJed Brown Vec Ylast; 688c4762a1bSJed Brown PetscScalar dot; 689c4762a1bSJed Brown PetscInt iter; 690c4762a1bSJed Brown PetscReal ynorm,ylastnorm,theta,angle_radians; 691c4762a1bSJed Brown SNES snes; 692c4762a1bSJed Brown 693c4762a1bSJed Brown PetscFunctionBeginUser; 694c4762a1bSJed Brown ierr = SNESLineSearchGetSNES(linesearch, &snes);CHKERRQ(ierr); 695c4762a1bSJed Brown precheck = (PreCheck)ctx; 696c4762a1bSJed Brown if (!precheck->Ylast) {ierr = VecDuplicate(Y,&precheck->Ylast);CHKERRQ(ierr);} 697c4762a1bSJed Brown Ylast = precheck->Ylast; 698c4762a1bSJed Brown ierr = SNESGetIterationNumber(snes,&iter);CHKERRQ(ierr); 699c4762a1bSJed Brown if (iter < 1) { 700c4762a1bSJed Brown ierr = VecCopy(Y,Ylast);CHKERRQ(ierr); 701c4762a1bSJed Brown *changed = PETSC_FALSE; 702c4762a1bSJed Brown PetscFunctionReturn(0); 703c4762a1bSJed Brown } 704c4762a1bSJed Brown 705c4762a1bSJed Brown ierr = VecDot(Y,Ylast,&dot);CHKERRQ(ierr); 706c4762a1bSJed Brown ierr = VecNorm(Y,NORM_2,&ynorm);CHKERRQ(ierr); 707c4762a1bSJed Brown ierr = VecNorm(Ylast,NORM_2,&ylastnorm);CHKERRQ(ierr); 708c4762a1bSJed Brown /* Compute the angle between the vectors Y and Ylast, clip to keep inside the domain of acos() */ 709c4762a1bSJed Brown theta = PetscAcosReal((PetscReal)PetscClipInterval(PetscAbsScalar(dot) / (ynorm * ylastnorm),-1.0,1.0)); 710c4762a1bSJed Brown angle_radians = precheck->angle * PETSC_PI / 180.; 711c4762a1bSJed Brown if (PetscAbsReal(theta) < angle_radians || PetscAbsReal(theta - PETSC_PI) < angle_radians) { 712c4762a1bSJed Brown /* Modify the step Y */ 713c4762a1bSJed Brown PetscReal alpha,ydiffnorm; 714c4762a1bSJed Brown ierr = VecAXPY(Ylast,-1.0,Y);CHKERRQ(ierr); 715c4762a1bSJed Brown ierr = VecNorm(Ylast,NORM_2,&ydiffnorm);CHKERRQ(ierr); 716c4762a1bSJed Brown alpha = ylastnorm / ydiffnorm; 717c4762a1bSJed Brown ierr = VecCopy(Y,Ylast);CHKERRQ(ierr); 718c4762a1bSJed Brown ierr = VecScale(Y,alpha);CHKERRQ(ierr); 719c4762a1bSJed Brown if (precheck->monitor) { 720c4762a1bSJed Brown ierr = PetscViewerASCIIPrintf(precheck->monitor,"Angle %E degrees less than threshold %g, corrected step by alpha=%g\n",(double)(theta*180./PETSC_PI),(double)precheck->angle,(double)alpha);CHKERRQ(ierr); 721c4762a1bSJed Brown } 722c4762a1bSJed Brown } else { 723c4762a1bSJed Brown ierr = VecCopy(Y,Ylast);CHKERRQ(ierr); 724c4762a1bSJed Brown *changed = PETSC_FALSE; 725c4762a1bSJed Brown if (precheck->monitor) { 726c4762a1bSJed Brown ierr = PetscViewerASCIIPrintf(precheck->monitor,"Angle %E degrees exceeds threshold %g, no correction applied\n",(double)(theta*180./PETSC_PI),(double)precheck->angle);CHKERRQ(ierr); 727c4762a1bSJed Brown } 728c4762a1bSJed Brown } 729c4762a1bSJed Brown PetscFunctionReturn(0); 730c4762a1bSJed Brown } 731c4762a1bSJed Brown 732c4762a1bSJed Brown PetscErrorCode PreCheckDestroy(PreCheck *precheck) 733c4762a1bSJed Brown { 734c4762a1bSJed Brown PetscErrorCode ierr; 735c4762a1bSJed Brown 736c4762a1bSJed Brown PetscFunctionBeginUser; 737c4762a1bSJed Brown if (!*precheck) PetscFunctionReturn(0); 738c4762a1bSJed Brown ierr = VecDestroy(&(*precheck)->Ylast);CHKERRQ(ierr); 739c4762a1bSJed Brown ierr = PetscViewerDestroy(&(*precheck)->monitor);CHKERRQ(ierr); 740c4762a1bSJed Brown ierr = PetscFree(*precheck);CHKERRQ(ierr); 741c4762a1bSJed Brown PetscFunctionReturn(0); 742c4762a1bSJed Brown } 743c4762a1bSJed Brown 744c4762a1bSJed Brown PetscErrorCode PreCheckCreate(MPI_Comm comm,PreCheck *precheck) 745c4762a1bSJed Brown { 746c4762a1bSJed Brown PetscErrorCode ierr; 747c4762a1bSJed Brown 748c4762a1bSJed Brown PetscFunctionBeginUser; 749c4762a1bSJed Brown ierr = PetscNew(precheck);CHKERRQ(ierr); 750c4762a1bSJed Brown 751c4762a1bSJed Brown (*precheck)->comm = comm; 752c4762a1bSJed Brown (*precheck)->angle = 10.; /* only active if angle is less than 10 degrees */ 753c4762a1bSJed Brown PetscFunctionReturn(0); 754c4762a1bSJed Brown } 755c4762a1bSJed Brown 756c4762a1bSJed Brown /* 757c4762a1bSJed Brown Applies some sweeps on nonlinear Gauss-Seidel on each process 758c4762a1bSJed Brown 759c4762a1bSJed Brown */ 760c4762a1bSJed Brown PetscErrorCode NonlinearGS(SNES snes,Vec X, Vec B, void *ctx) 761c4762a1bSJed Brown { 762c4762a1bSJed Brown PetscInt i,j,k,xs,ys,xm,ym,its,tot_its,sweeps,l,m; 763c4762a1bSJed Brown PetscErrorCode ierr; 764c4762a1bSJed Brown PetscReal hx,hy,hxdhy,hydhx,dhx,dhy,sc; 765c4762a1bSJed Brown PetscScalar **x,**b,bij,F,F0=0,J,y,u,eu; 766c4762a1bSJed Brown PetscReal atol,rtol,stol; 767c4762a1bSJed Brown DM da; 768c4762a1bSJed Brown AppCtx *user = (AppCtx*)ctx; 769c4762a1bSJed Brown Vec localX,localB; 770c4762a1bSJed Brown DMDALocalInfo info; 771c4762a1bSJed Brown 772c4762a1bSJed Brown PetscFunctionBeginUser; 773c4762a1bSJed Brown ierr = SNESGetDM(snes,&da);CHKERRQ(ierr); 774c4762a1bSJed Brown ierr = DMDAGetLocalInfo(da,&info);CHKERRQ(ierr); 775c4762a1bSJed Brown 776c4762a1bSJed Brown hx = 1.0/(PetscReal)(info.mx-1); 777c4762a1bSJed Brown hy = 1.0/(PetscReal)(info.my-1); 778c4762a1bSJed Brown sc = hx*hy*user->lambda; 779c4762a1bSJed Brown dhx = 1/hx; 780c4762a1bSJed Brown dhy = 1/hy; 781c4762a1bSJed Brown hxdhy = hx/hy; 782c4762a1bSJed Brown hydhx = hy/hx; 783c4762a1bSJed Brown 784c4762a1bSJed Brown tot_its = 0; 785c4762a1bSJed Brown ierr = SNESNGSGetSweeps(snes,&sweeps);CHKERRQ(ierr); 786c4762a1bSJed Brown ierr = SNESNGSGetTolerances(snes,&atol,&rtol,&stol,&its);CHKERRQ(ierr); 787c4762a1bSJed Brown ierr = DMGetLocalVector(da,&localX);CHKERRQ(ierr); 788c4762a1bSJed Brown if (B) { 789c4762a1bSJed Brown ierr = DMGetLocalVector(da,&localB);CHKERRQ(ierr); 790c4762a1bSJed Brown } 791c4762a1bSJed Brown if (B) { 792c4762a1bSJed Brown ierr = DMGlobalToLocalBegin(da,B,INSERT_VALUES,localB);CHKERRQ(ierr); 793c4762a1bSJed Brown ierr = DMGlobalToLocalEnd(da,B,INSERT_VALUES,localB);CHKERRQ(ierr); 794c4762a1bSJed Brown } 795c4762a1bSJed Brown if (B) ierr = DMDAVecGetArrayRead(da,localB,&b);CHKERRQ(ierr); 796c4762a1bSJed Brown ierr = DMGlobalToLocalBegin(da,X,INSERT_VALUES,localX);CHKERRQ(ierr); 797c4762a1bSJed Brown ierr = DMGlobalToLocalEnd(da,X,INSERT_VALUES,localX);CHKERRQ(ierr); 798c4762a1bSJed Brown ierr = DMDAVecGetArray(da,localX,&x);CHKERRQ(ierr); 799c4762a1bSJed Brown for (l=0; l<sweeps; l++) { 800c4762a1bSJed Brown /* 801c4762a1bSJed Brown Get local grid boundaries (for 2-dimensional DMDA): 802c4762a1bSJed Brown xs, ys - starting grid indices (no ghost points) 803c4762a1bSJed Brown xm, ym - widths of local grid (no ghost points) 804c4762a1bSJed Brown */ 805c4762a1bSJed Brown ierr = DMDAGetCorners(da,&xs,&ys,NULL,&xm,&ym,NULL);CHKERRQ(ierr); 806c4762a1bSJed Brown for (m=0; m<2; m++) { 807c4762a1bSJed Brown for (j=ys; j<ys+ym; j++) { 808c4762a1bSJed Brown for (i=xs+(m+j)%2; i<xs+xm; i+=2) { 809c4762a1bSJed Brown PetscReal xx = i*hx,yy = j*hy; 810c4762a1bSJed Brown if (B) bij = b[j][i]; 811c4762a1bSJed Brown else bij = 0.; 812c4762a1bSJed Brown 813c4762a1bSJed Brown if (i == 0 || j == 0 || i == info.mx-1 || j == info.my-1) { 814c4762a1bSJed Brown /* boundary conditions are all zero Dirichlet */ 815c4762a1bSJed Brown x[j][i] = 0.0 + bij; 816c4762a1bSJed Brown } else { 817c4762a1bSJed Brown const PetscScalar 818c4762a1bSJed Brown u_E = x[j][i+1], 819c4762a1bSJed Brown u_W = x[j][i-1], 820c4762a1bSJed Brown u_N = x[j+1][i], 821c4762a1bSJed Brown u_S = x[j-1][i]; 822c4762a1bSJed Brown const PetscScalar 823c4762a1bSJed Brown uy_E = 0.25*dhy*(x[j+1][i]+x[j+1][i+1]-x[j-1][i]-x[j-1][i+1]), 824c4762a1bSJed Brown uy_W = 0.25*dhy*(x[j+1][i-1]+x[j+1][i]-x[j-1][i-1]-x[j-1][i]), 825c4762a1bSJed Brown ux_N = 0.25*dhx*(x[j][i+1]+x[j+1][i+1]-x[j][i-1]-x[j+1][i-1]), 826c4762a1bSJed Brown ux_S = 0.25*dhx*(x[j-1][i+1]+x[j][i+1]-x[j-1][i-1]-x[j][i-1]); 827c4762a1bSJed Brown u = x[j][i]; 828c4762a1bSJed Brown for (k=0; k<its; k++) { 829c4762a1bSJed Brown const PetscScalar 830c4762a1bSJed Brown ux_E = dhx*(u_E-u), 831c4762a1bSJed Brown ux_W = dhx*(u-u_W), 832c4762a1bSJed Brown uy_N = dhy*(u_N-u), 833c4762a1bSJed Brown uy_S = dhy*(u-u_S), 834c4762a1bSJed Brown e_E = eta(user,xx,yy,ux_E,uy_E), 835c4762a1bSJed Brown e_W = eta(user,xx,yy,ux_W,uy_W), 836c4762a1bSJed Brown e_N = eta(user,xx,yy,ux_N,uy_N), 837c4762a1bSJed Brown e_S = eta(user,xx,yy,ux_S,uy_S), 838c4762a1bSJed Brown de_E = deta(user,xx,yy,ux_E,uy_E), 839c4762a1bSJed Brown de_W = deta(user,xx,yy,ux_W,uy_W), 840c4762a1bSJed Brown de_N = deta(user,xx,yy,ux_N,uy_N), 841c4762a1bSJed Brown de_S = deta(user,xx,yy,ux_S,uy_S), 842c4762a1bSJed Brown newt_E = e_E+de_E*PetscSqr(ux_E), 843c4762a1bSJed Brown newt_W = e_W+de_W*PetscSqr(ux_W), 844c4762a1bSJed Brown newt_N = e_N+de_N*PetscSqr(uy_N), 845c4762a1bSJed Brown newt_S = e_S+de_S*PetscSqr(uy_S), 846c4762a1bSJed Brown uxx = -hy * (e_E*ux_E - e_W*ux_W), 847c4762a1bSJed Brown uyy = -hx * (e_N*uy_N - e_S*uy_S); 848c4762a1bSJed Brown 849c4762a1bSJed Brown if (sc) eu = PetscExpScalar(u); 850c4762a1bSJed Brown else eu = 0; 851c4762a1bSJed Brown 852c4762a1bSJed Brown F = uxx + uyy - sc*eu - bij; 853c4762a1bSJed Brown if (k == 0) F0 = F; 854c4762a1bSJed Brown J = hxdhy*(newt_N + newt_S) + hydhx*(newt_E + newt_W) - sc*eu; 855c4762a1bSJed Brown y = F/J; 856c4762a1bSJed Brown u -= y; 857c4762a1bSJed Brown tot_its++; 858c4762a1bSJed Brown if (atol > PetscAbsReal(PetscRealPart(F)) || 859c4762a1bSJed Brown rtol*PetscAbsReal(PetscRealPart(F0)) > PetscAbsReal(PetscRealPart(F)) || 860c4762a1bSJed Brown stol*PetscAbsReal(PetscRealPart(u)) > PetscAbsReal(PetscRealPart(y))) { 861c4762a1bSJed Brown break; 862c4762a1bSJed Brown } 863c4762a1bSJed Brown } 864c4762a1bSJed Brown x[j][i] = u; 865c4762a1bSJed Brown } 866c4762a1bSJed Brown } 867c4762a1bSJed Brown } 868c4762a1bSJed Brown } 869c4762a1bSJed Brown /* 870c4762a1bSJed Brown x Restore vector 871c4762a1bSJed Brown */ 872c4762a1bSJed Brown } 873c4762a1bSJed Brown ierr = DMDAVecRestoreArray(da,localX,&x);CHKERRQ(ierr); 874c4762a1bSJed Brown ierr = DMLocalToGlobalBegin(da,localX,INSERT_VALUES,X);CHKERRQ(ierr); 875c4762a1bSJed Brown ierr = DMLocalToGlobalEnd(da,localX,INSERT_VALUES,X);CHKERRQ(ierr); 876c4762a1bSJed Brown ierr = PetscLogFlops(tot_its*(118.0));CHKERRQ(ierr); 877c4762a1bSJed Brown ierr = DMRestoreLocalVector(da,&localX);CHKERRQ(ierr); 878c4762a1bSJed Brown if (B) { 879c4762a1bSJed Brown ierr = DMDAVecRestoreArrayRead(da,localB,&b);CHKERRQ(ierr); 880c4762a1bSJed Brown ierr = DMRestoreLocalVector(da,&localB);CHKERRQ(ierr); 881c4762a1bSJed Brown } 882c4762a1bSJed Brown PetscFunctionReturn(0); 883c4762a1bSJed Brown } 884c4762a1bSJed Brown 885c4762a1bSJed Brown 886c4762a1bSJed Brown /*TEST 887c4762a1bSJed Brown 888c4762a1bSJed Brown test: 889c4762a1bSJed Brown nsize: 2 890c4762a1bSJed Brown args: -snes_monitor_short -da_grid_x 20 -da_grid_y 20 -p 1.3 -lambda 1 -jtype NEWTON 891c4762a1bSJed Brown requires: !single 892c4762a1bSJed Brown 893c4762a1bSJed Brown test: 894c4762a1bSJed Brown suffix: 2 895c4762a1bSJed Brown nsize: 2 896c4762a1bSJed Brown args: -snes_monitor_short -da_grid_x 20 -da_grid_y 20 -p 1.3 -lambda 1 -jtype PICARD -precheck 1 897c4762a1bSJed Brown requires: !single 898c4762a1bSJed Brown 899c4762a1bSJed Brown test: 900c4762a1bSJed Brown suffix: 3 901c4762a1bSJed Brown nsize: 2 902c4762a1bSJed Brown args: -snes_monitor_short -da_grid_x 20 -da_grid_y 20 -p 1.3 -lambda 1 -jtype PICARD -picard -precheck 1 903c4762a1bSJed Brown requires: !single 904c4762a1bSJed Brown 905c4762a1bSJed Brown test: 906c4762a1bSJed Brown suffix: 4 907c4762a1bSJed Brown args: -snes_monitor_short -snes_type newtonls -npc_snes_type ngs -snes_npc_side left -da_grid_x 20 -da_grid_y 20 -p 1.3 -lambda 1 -ksp_monitor_short -pc_type none 908c4762a1bSJed Brown requires: !single 909c4762a1bSJed Brown 910c4762a1bSJed Brown test: 911c4762a1bSJed Brown suffix: lag_jac 912c4762a1bSJed Brown nsize: 4 913c4762a1bSJed Brown args: -snes_monitor_short -da_grid_x 20 -da_grid_y 20 -p 6.0 -lambda 0 -jtype NEWTON -snes_type ngmres -npc_snes_type newtonls -npc_snes_lag_jacobian 5 -npc_pc_type asm -npc_ksp_converged_reason -npc_snes_lag_jacobian_persists 914c4762a1bSJed Brown requires: !single 915c4762a1bSJed Brown 916c4762a1bSJed Brown test: 917c4762a1bSJed Brown suffix: lag_pc 918c4762a1bSJed Brown nsize: 4 919c4762a1bSJed Brown args: -snes_monitor_short -da_grid_x 20 -da_grid_y 20 -p 6.0 -lambda 0 -jtype NEWTON -snes_type ngmres -npc_snes_type newtonls -npc_snes_lag_preconditioner 5 -npc_pc_type asm -npc_ksp_converged_reason -npc_snes_lag_preconditioner_persists 920c4762a1bSJed Brown requires: !single 921c4762a1bSJed Brown 922c4762a1bSJed Brown test: 923c4762a1bSJed Brown suffix: nleqerr 924c4762a1bSJed Brown args: -snes_monitor_short -snes_type newtonls -da_grid_x 20 -da_grid_y 20 -p 1.3 -lambda 1 -snes_linesearch_monitor -pc_type lu -snes_linesearch_type nleqerr 925c4762a1bSJed Brown requires: !single 926c4762a1bSJed Brown 927*bbc1464cSBarry Smith test: 928*bbc1464cSBarry Smith suffix: mf 929*bbc1464cSBarry Smith args: -snes_monitor_short -pc_type lu -da_refine 4 -p 3 -ksp_rtol 1.e-12 -snes_mf_operator 930*bbc1464cSBarry Smith requires: !single 931*bbc1464cSBarry Smith 932*bbc1464cSBarry Smith test: 933*bbc1464cSBarry Smith suffix: mf_picard 934*bbc1464cSBarry Smith args: -snes_monitor_short -pc_type lu -da_refine 4 -p 3 -ksp_rtol 1.e-12 -snes_mf_operator -picard 935*bbc1464cSBarry Smith requires: !single 936*bbc1464cSBarry Smith output_file: output/ex15_mf.out 937*bbc1464cSBarry Smith 938c4762a1bSJed Brown TEST*/ 939