1c4762a1bSJed Brown 2c4762a1bSJed Brown #include <petscsnes.h> 3c4762a1bSJed Brown #include <petscdm.h> 4c4762a1bSJed Brown #include <petscdmda.h> 5c4762a1bSJed Brown 6c4762a1bSJed Brown static const char help[] = "Parallel version of the minimum surface area problem in 2D using DMDA.\n\ 7c4762a1bSJed Brown It solves a system of nonlinear equations in mixed\n\ 8c4762a1bSJed Brown complementarity form.This example is based on a\n\ 9c4762a1bSJed Brown problem from the MINPACK-2 test suite. Given a rectangular 2-D domain and\n\ 10c4762a1bSJed Brown boundary values along the edges of the domain, the objective is to find the\n\ 11c4762a1bSJed Brown surface with the minimal area that satisfies the boundary conditions.\n\ 12c4762a1bSJed Brown This application solves this problem using complimentarity -- We are actually\n\ 13c4762a1bSJed Brown solving the system (grad f)_i >= 0, if x_i == l_i \n\ 14c4762a1bSJed Brown (grad f)_i = 0, if l_i < x_i < u_i \n\ 15c4762a1bSJed Brown (grad f)_i <= 0, if x_i == u_i \n\ 16c4762a1bSJed Brown where f is the function to be minimized. \n\ 17c4762a1bSJed Brown \n\ 18c4762a1bSJed Brown The command line options are:\n\ 19c4762a1bSJed Brown -da_grid_x <nx>, where <nx> = number of grid points in the 1st coordinate direction\n\ 20c4762a1bSJed Brown -da_grid_y <ny>, where <ny> = number of grid points in the 2nd coordinate direction\n\ 21c4762a1bSJed Brown -start <st>, where <st> =0 for zero vector, and an average of the boundary conditions otherwise\n\ 22c4762a1bSJed Brown -lb <value>, lower bound on the variables\n\ 23c4762a1bSJed Brown -ub <value>, upper bound on the variables\n\n"; 24c4762a1bSJed Brown 25c4762a1bSJed Brown /* 26c4762a1bSJed Brown User-defined application context - contains data needed by the 27c4762a1bSJed Brown application-provided call-back routines, FormJacobian() and 28c4762a1bSJed Brown FormFunction(). 29c4762a1bSJed Brown */ 30c4762a1bSJed Brown 31c4762a1bSJed Brown /* 32c4762a1bSJed Brown This is a new version of the ../tests/ex8.c code 33c4762a1bSJed Brown 34c4762a1bSJed Brown Run, for example, with the options ./ex58 -snes_vi_monitor -ksp_monitor -mg_levels_ksp_monitor -pc_type mg -pc_mg_levels 2 -pc_mg_galerkin pmat -ksp_type fgmres 35c4762a1bSJed Brown 36c4762a1bSJed Brown Or to run with grid sequencing on the nonlinear problem (note that you do not need to provide the number of 37c4762a1bSJed Brown multigrid levels, it will be determined automatically based on the number of refinements done) 38c4762a1bSJed Brown 39c4762a1bSJed Brown ./ex58 -pc_type mg -ksp_monitor -snes_view -pc_mg_galerkin pmat -snes_grid_sequence 3 40c4762a1bSJed Brown -mg_levels_ksp_monitor -snes_vi_monitor -mg_levels_pc_type sor -pc_mg_type full 41c4762a1bSJed Brown 42c4762a1bSJed Brown */ 43c4762a1bSJed Brown 44c4762a1bSJed Brown typedef struct { 45c4762a1bSJed Brown PetscScalar *bottom, *top, *left, *right; 46c4762a1bSJed Brown PetscScalar lb,ub; 47c4762a1bSJed Brown } AppCtx; 48c4762a1bSJed Brown 49c4762a1bSJed Brown /* -------- User-defined Routines --------- */ 50c4762a1bSJed Brown 51c4762a1bSJed Brown extern PetscErrorCode FormBoundaryConditions(SNES,AppCtx**); 52c4762a1bSJed Brown extern PetscErrorCode DestroyBoundaryConditions(AppCtx**); 53c4762a1bSJed Brown extern PetscErrorCode ComputeInitialGuess(SNES,Vec,void*); 54c4762a1bSJed Brown extern PetscErrorCode FormGradient(SNES,Vec,Vec,void*); 55c4762a1bSJed Brown extern PetscErrorCode FormJacobian(SNES,Vec,Mat,Mat,void*); 56c4762a1bSJed Brown extern PetscErrorCode FormBounds(SNES,Vec,Vec); 57c4762a1bSJed Brown 58c4762a1bSJed Brown int main(int argc, char **argv) 59c4762a1bSJed Brown { 60c4762a1bSJed Brown PetscErrorCode ierr; /* used to check for functions returning nonzeros */ 61c4762a1bSJed Brown Vec x,r; /* solution and residual vectors */ 62c4762a1bSJed Brown SNES snes; /* nonlinear solver context */ 63c4762a1bSJed Brown Mat J; /* Jacobian matrix */ 64c4762a1bSJed Brown DM da; 65c4762a1bSJed Brown 66c4762a1bSJed Brown ierr = PetscInitialize(&argc, &argv, (char*)0, help);if (ierr) return ierr; 67c4762a1bSJed Brown 68c4762a1bSJed Brown /* Create distributed array to manage the 2d grid */ 69*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDACreate2d(PETSC_COMM_WORLD, DM_BOUNDARY_NONE, DM_BOUNDARY_NONE,DMDA_STENCIL_BOX,4,4,PETSC_DECIDE,PETSC_DECIDE,1,1,NULL,NULL,&da)); 70*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetFromOptions(da)); 71*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetUp(da)); 72c4762a1bSJed Brown 73c4762a1bSJed Brown /* Extract global vectors from DMDA; */ 74*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMCreateGlobalVector(da,&x)); 75*5f80ce2aSJacob Faibussowitsch CHKERRQ(VecDuplicate(x, &r)); 76c4762a1bSJed Brown 77*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetMatType(da,MATAIJ)); 78*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMCreateMatrix(da,&J)); 79c4762a1bSJed Brown 80c4762a1bSJed Brown /* Create nonlinear solver context */ 81*5f80ce2aSJacob Faibussowitsch CHKERRQ(SNESCreate(PETSC_COMM_WORLD,&snes)); 82*5f80ce2aSJacob Faibussowitsch CHKERRQ(SNESSetDM(snes,da)); 83c4762a1bSJed Brown 84c4762a1bSJed Brown /* Set function evaluation and Jacobian evaluation routines */ 85*5f80ce2aSJacob Faibussowitsch CHKERRQ(SNESSetFunction(snes,r,FormGradient,NULL)); 86*5f80ce2aSJacob Faibussowitsch CHKERRQ(SNESSetJacobian(snes,J,J,FormJacobian,NULL)); 87c4762a1bSJed Brown 88*5f80ce2aSJacob Faibussowitsch CHKERRQ(SNESSetComputeApplicationContext(snes,(PetscErrorCode (*)(SNES,void**))FormBoundaryConditions,(PetscErrorCode (*)(void**))DestroyBoundaryConditions)); 89c4762a1bSJed Brown 90*5f80ce2aSJacob Faibussowitsch CHKERRQ(SNESSetComputeInitialGuess(snes,ComputeInitialGuess,NULL)); 91c4762a1bSJed Brown 92*5f80ce2aSJacob Faibussowitsch CHKERRQ(SNESVISetComputeVariableBounds(snes,FormBounds)); 93c4762a1bSJed Brown 94*5f80ce2aSJacob Faibussowitsch CHKERRQ(SNESSetFromOptions(snes)); 95c4762a1bSJed Brown 96c4762a1bSJed Brown /* Solve the application */ 97*5f80ce2aSJacob Faibussowitsch CHKERRQ(SNESSolve(snes,NULL,x)); 98c4762a1bSJed Brown 99c4762a1bSJed Brown /* Free memory */ 100*5f80ce2aSJacob Faibussowitsch CHKERRQ(VecDestroy(&x)); 101*5f80ce2aSJacob Faibussowitsch CHKERRQ(VecDestroy(&r)); 102*5f80ce2aSJacob Faibussowitsch CHKERRQ(MatDestroy(&J)); 103*5f80ce2aSJacob Faibussowitsch CHKERRQ(SNESDestroy(&snes)); 104c4762a1bSJed Brown 105c4762a1bSJed Brown /* Free user-created data structures */ 106*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(&da)); 107c4762a1bSJed Brown 108c4762a1bSJed Brown ierr = PetscFinalize(); 109c4762a1bSJed Brown return ierr; 110c4762a1bSJed Brown } 111c4762a1bSJed Brown 112c4762a1bSJed Brown /* -------------------------------------------------------------------- */ 113c4762a1bSJed Brown 114c4762a1bSJed Brown /* FormBounds - sets the upper and lower bounds 115c4762a1bSJed Brown 116c4762a1bSJed Brown Input Parameters: 117c4762a1bSJed Brown . snes - the SNES context 118c4762a1bSJed Brown 119c4762a1bSJed Brown Output Parameters: 120c4762a1bSJed Brown . xl - lower bounds 121c4762a1bSJed Brown . xu - upper bounds 122c4762a1bSJed Brown */ 123c4762a1bSJed Brown PetscErrorCode FormBounds(SNES snes, Vec xl, Vec xu) 124c4762a1bSJed Brown { 125c4762a1bSJed Brown AppCtx *ctx; 126c4762a1bSJed Brown 127c4762a1bSJed Brown PetscFunctionBeginUser; 128*5f80ce2aSJacob Faibussowitsch CHKERRQ(SNESGetApplicationContext(snes,&ctx)); 129*5f80ce2aSJacob Faibussowitsch CHKERRQ(VecSet(xl,ctx->lb)); 130*5f80ce2aSJacob Faibussowitsch CHKERRQ(VecSet(xu,ctx->ub)); 131c4762a1bSJed Brown PetscFunctionReturn(0); 132c4762a1bSJed Brown } 133c4762a1bSJed Brown 134c4762a1bSJed Brown /* -------------------------------------------------------------------- */ 135c4762a1bSJed Brown 136c4762a1bSJed Brown /* FormGradient - Evaluates gradient of f. 137c4762a1bSJed Brown 138c4762a1bSJed Brown Input Parameters: 139c4762a1bSJed Brown . snes - the SNES context 140c4762a1bSJed Brown . X - input vector 141c4762a1bSJed Brown . ptr - optional user-defined context, as set by SNESSetFunction() 142c4762a1bSJed Brown 143c4762a1bSJed Brown Output Parameters: 144c4762a1bSJed Brown . G - vector containing the newly evaluated gradient 145c4762a1bSJed Brown */ 146c4762a1bSJed Brown PetscErrorCode FormGradient(SNES snes, Vec X, Vec G, void *ptr) 147c4762a1bSJed Brown { 148c4762a1bSJed Brown AppCtx *user; 149c4762a1bSJed Brown PetscInt i,j; 150c4762a1bSJed Brown PetscInt mx, my; 151c4762a1bSJed Brown PetscScalar hx,hy, hydhx, hxdhy; 152c4762a1bSJed Brown PetscScalar f1,f2,f3,f4,f5,f6,d1,d2,d3,d4,d5,d6,d7,d8,xc,xl,xr,xt,xb,xlt,xrb; 153c4762a1bSJed Brown PetscScalar df1dxc,df2dxc,df3dxc,df4dxc,df5dxc,df6dxc; 154c4762a1bSJed Brown PetscScalar **g, **x; 155c4762a1bSJed Brown PetscInt xs,xm,ys,ym; 156c4762a1bSJed Brown Vec localX; 157c4762a1bSJed Brown DM da; 158c4762a1bSJed Brown 159c4762a1bSJed Brown PetscFunctionBeginUser; 160*5f80ce2aSJacob Faibussowitsch CHKERRQ(SNESGetDM(snes,&da)); 161*5f80ce2aSJacob Faibussowitsch CHKERRQ(SNESGetApplicationContext(snes,&user)); 162*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDAGetInfo(da,PETSC_IGNORE,&mx,&my,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE)); 163c4762a1bSJed Brown hx = 1.0/(mx+1);hy=1.0/(my+1); hydhx=hy/hx; hxdhy=hx/hy; 164c4762a1bSJed Brown 165*5f80ce2aSJacob Faibussowitsch CHKERRQ(VecSet(G,0.0)); 166c4762a1bSJed Brown 167c4762a1bSJed Brown /* Get local vector */ 168*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMGetLocalVector(da,&localX)); 169c4762a1bSJed Brown /* Get ghost points */ 170*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMGlobalToLocalBegin(da,X,INSERT_VALUES,localX)); 171*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMGlobalToLocalEnd(da,X,INSERT_VALUES,localX)); 172c4762a1bSJed Brown /* Get pointer to local vector data */ 173*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDAVecGetArray(da,localX, &x)); 174*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDAVecGetArray(da,G, &g)); 175c4762a1bSJed Brown 176*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDAGetCorners(da,&xs,&ys,NULL,&xm,&ym,NULL)); 177c4762a1bSJed Brown /* Compute function over the locally owned part of the mesh */ 178c4762a1bSJed Brown for (j=ys; j < ys+ym; j++) { 179c4762a1bSJed Brown for (i=xs; i< xs+xm; i++) { 180c4762a1bSJed Brown 181c4762a1bSJed Brown xc = x[j][i]; 182c4762a1bSJed Brown xlt=xrb=xl=xr=xb=xt=xc; 183c4762a1bSJed Brown 184c4762a1bSJed Brown if (i==0) { /* left side */ 185c4762a1bSJed Brown xl = user->left[j+1]; 186c4762a1bSJed Brown xlt = user->left[j+2]; 187c4762a1bSJed Brown } else xl = x[j][i-1]; 188c4762a1bSJed Brown 189c4762a1bSJed Brown if (j==0) { /* bottom side */ 190c4762a1bSJed Brown xb = user->bottom[i+1]; 191c4762a1bSJed Brown xrb = user->bottom[i+2]; 192c4762a1bSJed Brown } else xb = x[j-1][i]; 193c4762a1bSJed Brown 194c4762a1bSJed Brown if (i+1 == mx) { /* right side */ 195c4762a1bSJed Brown xr = user->right[j+1]; 196c4762a1bSJed Brown xrb = user->right[j]; 197c4762a1bSJed Brown } else xr = x[j][i+1]; 198c4762a1bSJed Brown 199c4762a1bSJed Brown if (j+1==0+my) { /* top side */ 200c4762a1bSJed Brown xt = user->top[i+1]; 201c4762a1bSJed Brown xlt = user->top[i]; 202c4762a1bSJed Brown } else xt = x[j+1][i]; 203c4762a1bSJed Brown 204c4762a1bSJed Brown if (i>0 && j+1<my) xlt = x[j+1][i-1]; /* left top side */ 205c4762a1bSJed Brown if (j>0 && i+1<mx) xrb = x[j-1][i+1]; /* right bottom */ 206c4762a1bSJed Brown 207c4762a1bSJed Brown d1 = (xc-xl); 208c4762a1bSJed Brown d2 = (xc-xr); 209c4762a1bSJed Brown d3 = (xc-xt); 210c4762a1bSJed Brown d4 = (xc-xb); 211c4762a1bSJed Brown d5 = (xr-xrb); 212c4762a1bSJed Brown d6 = (xrb-xb); 213c4762a1bSJed Brown d7 = (xlt-xl); 214c4762a1bSJed Brown d8 = (xt-xlt); 215c4762a1bSJed Brown 216c4762a1bSJed Brown df1dxc = d1*hydhx; 217c4762a1bSJed Brown df2dxc = (d1*hydhx + d4*hxdhy); 218c4762a1bSJed Brown df3dxc = d3*hxdhy; 219c4762a1bSJed Brown df4dxc = (d2*hydhx + d3*hxdhy); 220c4762a1bSJed Brown df5dxc = d2*hydhx; 221c4762a1bSJed Brown df6dxc = d4*hxdhy; 222c4762a1bSJed Brown 223c4762a1bSJed Brown d1 /= hx; 224c4762a1bSJed Brown d2 /= hx; 225c4762a1bSJed Brown d3 /= hy; 226c4762a1bSJed Brown d4 /= hy; 227c4762a1bSJed Brown d5 /= hy; 228c4762a1bSJed Brown d6 /= hx; 229c4762a1bSJed Brown d7 /= hy; 230c4762a1bSJed Brown d8 /= hx; 231c4762a1bSJed Brown 232c4762a1bSJed Brown f1 = PetscSqrtScalar(1.0 + d1*d1 + d7*d7); 233c4762a1bSJed Brown f2 = PetscSqrtScalar(1.0 + d1*d1 + d4*d4); 234c4762a1bSJed Brown f3 = PetscSqrtScalar(1.0 + d3*d3 + d8*d8); 235c4762a1bSJed Brown f4 = PetscSqrtScalar(1.0 + d3*d3 + d2*d2); 236c4762a1bSJed Brown f5 = PetscSqrtScalar(1.0 + d2*d2 + d5*d5); 237c4762a1bSJed Brown f6 = PetscSqrtScalar(1.0 + d4*d4 + d6*d6); 238c4762a1bSJed Brown 239c4762a1bSJed Brown df1dxc /= f1; 240c4762a1bSJed Brown df2dxc /= f2; 241c4762a1bSJed Brown df3dxc /= f3; 242c4762a1bSJed Brown df4dxc /= f4; 243c4762a1bSJed Brown df5dxc /= f5; 244c4762a1bSJed Brown df6dxc /= f6; 245c4762a1bSJed Brown 246c4762a1bSJed Brown g[j][i] = (df1dxc+df2dxc+df3dxc+df4dxc+df5dxc+df6dxc)/2.0; 247c4762a1bSJed Brown 248c4762a1bSJed Brown } 249c4762a1bSJed Brown } 250c4762a1bSJed Brown 251c4762a1bSJed Brown /* Restore vectors */ 252*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDAVecRestoreArray(da,localX, &x)); 253*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDAVecRestoreArray(da,G, &g)); 254*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMRestoreLocalVector(da,&localX)); 255*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogFlops(67.0*mx*my)); 256c4762a1bSJed Brown PetscFunctionReturn(0); 257c4762a1bSJed Brown } 258c4762a1bSJed Brown 259c4762a1bSJed Brown /* ------------------------------------------------------------------- */ 260c4762a1bSJed Brown /* 261c4762a1bSJed Brown FormJacobian - Evaluates Jacobian matrix. 262c4762a1bSJed Brown 263c4762a1bSJed Brown Input Parameters: 264c4762a1bSJed Brown . snes - SNES context 265c4762a1bSJed Brown . X - input vector 266c4762a1bSJed Brown . ptr - optional user-defined context, as set by SNESSetJacobian() 267c4762a1bSJed Brown 268c4762a1bSJed Brown Output Parameters: 269c4762a1bSJed Brown . tH - Jacobian matrix 270c4762a1bSJed Brown 271c4762a1bSJed Brown */ 272c4762a1bSJed Brown PetscErrorCode FormJacobian(SNES snes, Vec X, Mat H, Mat tHPre, void *ptr) 273c4762a1bSJed Brown { 274c4762a1bSJed Brown AppCtx *user; 275c4762a1bSJed Brown PetscInt i,j,k; 276c4762a1bSJed Brown PetscInt mx, my; 277c4762a1bSJed Brown MatStencil row,col[7]; 278c4762a1bSJed Brown PetscScalar hx, hy, hydhx, hxdhy; 279c4762a1bSJed Brown PetscScalar f1,f2,f3,f4,f5,f6,d1,d2,d3,d4,d5,d6,d7,d8,xc,xl,xr,xt,xb,xlt,xrb; 280c4762a1bSJed Brown PetscScalar hl,hr,ht,hb,hc,htl,hbr; 281c4762a1bSJed Brown PetscScalar **x, v[7]; 282c4762a1bSJed Brown PetscBool assembled; 283c4762a1bSJed Brown PetscInt xs,xm,ys,ym; 284c4762a1bSJed Brown Vec localX; 285c4762a1bSJed Brown DM da; 286c4762a1bSJed Brown 287c4762a1bSJed Brown PetscFunctionBeginUser; 288*5f80ce2aSJacob Faibussowitsch CHKERRQ(SNESGetDM(snes,&da)); 289*5f80ce2aSJacob Faibussowitsch CHKERRQ(SNESGetApplicationContext(snes,&user)); 290*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDAGetInfo(da,PETSC_IGNORE,&mx,&my,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE)); 291c4762a1bSJed Brown hx = 1.0/(mx+1); hy=1.0/(my+1); hydhx=hy/hx; hxdhy=hx/hy; 292c4762a1bSJed Brown 293c4762a1bSJed Brown /* Set various matrix options */ 294*5f80ce2aSJacob Faibussowitsch CHKERRQ(MatAssembled(H,&assembled)); 295*5f80ce2aSJacob Faibussowitsch if (assembled) CHKERRQ(MatZeroEntries(H)); 296c4762a1bSJed Brown 297c4762a1bSJed Brown /* Get local vector */ 298*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMGetLocalVector(da,&localX)); 299c4762a1bSJed Brown /* Get ghost points */ 300*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMGlobalToLocalBegin(da,X,INSERT_VALUES,localX)); 301*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMGlobalToLocalEnd(da,X,INSERT_VALUES,localX)); 302c4762a1bSJed Brown 303c4762a1bSJed Brown /* Get pointers to vector data */ 304*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDAVecGetArray(da,localX, &x)); 305c4762a1bSJed Brown 306*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDAGetCorners(da,&xs,&ys,NULL,&xm,&ym,NULL)); 307c4762a1bSJed Brown /* Compute Jacobian over the locally owned part of the mesh */ 308c4762a1bSJed Brown for (j=ys; j< ys+ym; j++) { 309c4762a1bSJed Brown for (i=xs; i< xs+xm; i++) { 310c4762a1bSJed Brown xc = x[j][i]; 311c4762a1bSJed Brown xlt=xrb=xl=xr=xb=xt=xc; 312c4762a1bSJed Brown 313c4762a1bSJed Brown /* Left */ 314c4762a1bSJed Brown if (i==0) { 315c4762a1bSJed Brown xl = user->left[j+1]; 316c4762a1bSJed Brown xlt = user->left[j+2]; 317c4762a1bSJed Brown } else xl = x[j][i-1]; 318c4762a1bSJed Brown 319c4762a1bSJed Brown /* Bottom */ 320c4762a1bSJed Brown if (j==0) { 321c4762a1bSJed Brown xb =user->bottom[i+1]; 322c4762a1bSJed Brown xrb = user->bottom[i+2]; 323c4762a1bSJed Brown } else xb = x[j-1][i]; 324c4762a1bSJed Brown 325c4762a1bSJed Brown /* Right */ 326c4762a1bSJed Brown if (i+1 == mx) { 327c4762a1bSJed Brown xr =user->right[j+1]; 328c4762a1bSJed Brown xrb = user->right[j]; 329c4762a1bSJed Brown } else xr = x[j][i+1]; 330c4762a1bSJed Brown 331c4762a1bSJed Brown /* Top */ 332c4762a1bSJed Brown if (j+1==my) { 333c4762a1bSJed Brown xt =user->top[i+1]; 334c4762a1bSJed Brown xlt = user->top[i]; 335c4762a1bSJed Brown } else xt = x[j+1][i]; 336c4762a1bSJed Brown 337c4762a1bSJed Brown /* Top left */ 338c4762a1bSJed Brown if (i>0 && j+1<my) xlt = x[j+1][i-1]; 339c4762a1bSJed Brown 340c4762a1bSJed Brown /* Bottom right */ 341c4762a1bSJed Brown if (j>0 && i+1<mx) xrb = x[j-1][i+1]; 342c4762a1bSJed Brown 343c4762a1bSJed Brown d1 = (xc-xl)/hx; 344c4762a1bSJed Brown d2 = (xc-xr)/hx; 345c4762a1bSJed Brown d3 = (xc-xt)/hy; 346c4762a1bSJed Brown d4 = (xc-xb)/hy; 347c4762a1bSJed Brown d5 = (xrb-xr)/hy; 348c4762a1bSJed Brown d6 = (xrb-xb)/hx; 349c4762a1bSJed Brown d7 = (xlt-xl)/hy; 350c4762a1bSJed Brown d8 = (xlt-xt)/hx; 351c4762a1bSJed Brown 352c4762a1bSJed Brown f1 = PetscSqrtScalar(1.0 + d1*d1 + d7*d7); 353c4762a1bSJed Brown f2 = PetscSqrtScalar(1.0 + d1*d1 + d4*d4); 354c4762a1bSJed Brown f3 = PetscSqrtScalar(1.0 + d3*d3 + d8*d8); 355c4762a1bSJed Brown f4 = PetscSqrtScalar(1.0 + d3*d3 + d2*d2); 356c4762a1bSJed Brown f5 = PetscSqrtScalar(1.0 + d2*d2 + d5*d5); 357c4762a1bSJed Brown f6 = PetscSqrtScalar(1.0 + d4*d4 + d6*d6); 358c4762a1bSJed Brown 359c4762a1bSJed Brown hl = (-hydhx*(1.0+d7*d7)+d1*d7)/(f1*f1*f1)+ 360c4762a1bSJed Brown (-hydhx*(1.0+d4*d4)+d1*d4)/(f2*f2*f2); 361c4762a1bSJed Brown hr = (-hydhx*(1.0+d5*d5)+d2*d5)/(f5*f5*f5)+ 362c4762a1bSJed Brown (-hydhx*(1.0+d3*d3)+d2*d3)/(f4*f4*f4); 363c4762a1bSJed Brown ht = (-hxdhy*(1.0+d8*d8)+d3*d8)/(f3*f3*f3)+ 364c4762a1bSJed Brown (-hxdhy*(1.0+d2*d2)+d2*d3)/(f4*f4*f4); 365c4762a1bSJed Brown hb = (-hxdhy*(1.0+d6*d6)+d4*d6)/(f6*f6*f6)+ 366c4762a1bSJed Brown (-hxdhy*(1.0+d1*d1)+d1*d4)/(f2*f2*f2); 367c4762a1bSJed Brown 368c4762a1bSJed Brown hbr = -d2*d5/(f5*f5*f5) - d4*d6/(f6*f6*f6); 369c4762a1bSJed Brown htl = -d1*d7/(f1*f1*f1) - d3*d8/(f3*f3*f3); 370c4762a1bSJed Brown 371c4762a1bSJed Brown hc = hydhx*(1.0+d7*d7)/(f1*f1*f1) + hxdhy*(1.0+d8*d8)/(f3*f3*f3) + 372c4762a1bSJed Brown hydhx*(1.0+d5*d5)/(f5*f5*f5) + hxdhy*(1.0+d6*d6)/(f6*f6*f6) + 373c4762a1bSJed Brown (hxdhy*(1.0+d1*d1)+hydhx*(1.0+d4*d4)-2.0*d1*d4)/(f2*f2*f2) + 374c4762a1bSJed Brown (hxdhy*(1.0+d2*d2)+hydhx*(1.0+d3*d3)-2.0*d2*d3)/(f4*f4*f4); 375c4762a1bSJed Brown 376c4762a1bSJed Brown hl/=2.0; hr/=2.0; ht/=2.0; hb/=2.0; hbr/=2.0; htl/=2.0; hc/=2.0; 377c4762a1bSJed Brown 378c4762a1bSJed Brown k =0; 379c4762a1bSJed Brown row.i = i;row.j= j; 380c4762a1bSJed Brown /* Bottom */ 381c4762a1bSJed Brown if (j>0) { 382c4762a1bSJed Brown v[k] =hb; 383c4762a1bSJed Brown col[k].i = i; col[k].j=j-1; k++; 384c4762a1bSJed Brown } 385c4762a1bSJed Brown 386c4762a1bSJed Brown /* Bottom right */ 387c4762a1bSJed Brown if (j>0 && i < mx -1) { 388c4762a1bSJed Brown v[k] =hbr; 389c4762a1bSJed Brown col[k].i = i+1; col[k].j = j-1; k++; 390c4762a1bSJed Brown } 391c4762a1bSJed Brown 392c4762a1bSJed Brown /* left */ 393c4762a1bSJed Brown if (i>0) { 394c4762a1bSJed Brown v[k] = hl; 395c4762a1bSJed Brown col[k].i = i-1; col[k].j = j; k++; 396c4762a1bSJed Brown } 397c4762a1bSJed Brown 398c4762a1bSJed Brown /* Centre */ 399c4762a1bSJed Brown v[k]= hc; col[k].i= row.i; col[k].j = row.j; k++; 400c4762a1bSJed Brown 401c4762a1bSJed Brown /* Right */ 402c4762a1bSJed Brown if (i < mx-1) { 403c4762a1bSJed Brown v[k] = hr; 404c4762a1bSJed Brown col[k].i= i+1; col[k].j = j;k++; 405c4762a1bSJed Brown } 406c4762a1bSJed Brown 407c4762a1bSJed Brown /* Top left */ 408c4762a1bSJed Brown if (i>0 && j < my-1) { 409c4762a1bSJed Brown v[k] = htl; 410c4762a1bSJed Brown col[k].i = i-1;col[k].j = j+1; k++; 411c4762a1bSJed Brown } 412c4762a1bSJed Brown 413c4762a1bSJed Brown /* Top */ 414c4762a1bSJed Brown if (j < my-1) { 415c4762a1bSJed Brown v[k] = ht; 416c4762a1bSJed Brown col[k].i = i; col[k].j = j+1; k++; 417c4762a1bSJed Brown } 418c4762a1bSJed Brown 419*5f80ce2aSJacob Faibussowitsch CHKERRQ(MatSetValuesStencil(H,1,&row,k,col,v,INSERT_VALUES)); 420c4762a1bSJed Brown } 421c4762a1bSJed Brown } 422c4762a1bSJed Brown 423c4762a1bSJed Brown /* Assemble the matrix */ 424*5f80ce2aSJacob Faibussowitsch CHKERRQ(MatAssemblyBegin(H,MAT_FINAL_ASSEMBLY)); 425*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDAVecRestoreArray(da,localX,&x)); 426*5f80ce2aSJacob Faibussowitsch CHKERRQ(MatAssemblyEnd(H,MAT_FINAL_ASSEMBLY)); 427*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMRestoreLocalVector(da,&localX)); 428c4762a1bSJed Brown 429*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogFlops(199.0*mx*my)); 430c4762a1bSJed Brown PetscFunctionReturn(0); 431c4762a1bSJed Brown } 432c4762a1bSJed Brown 433c4762a1bSJed Brown /* ------------------------------------------------------------------- */ 434c4762a1bSJed Brown /* 435c4762a1bSJed Brown FormBoundaryConditions - Calculates the boundary conditions for 436c4762a1bSJed Brown the region. 437c4762a1bSJed Brown 438c4762a1bSJed Brown Input Parameter: 439c4762a1bSJed Brown . user - user-defined application context 440c4762a1bSJed Brown 441c4762a1bSJed Brown Output Parameter: 442c4762a1bSJed Brown . user - user-defined application context 443c4762a1bSJed Brown */ 444c4762a1bSJed Brown PetscErrorCode FormBoundaryConditions(SNES snes,AppCtx **ouser) 445c4762a1bSJed Brown { 446c4762a1bSJed Brown PetscInt i,j,k,limit=0,maxits=5; 447c4762a1bSJed Brown PetscInt mx,my; 448c4762a1bSJed Brown PetscInt bsize=0, lsize=0, tsize=0, rsize=0; 449c4762a1bSJed Brown PetscScalar one =1.0, two=2.0, three=3.0; 450c4762a1bSJed Brown PetscScalar det,hx,hy,xt=0,yt=0; 451c4762a1bSJed Brown PetscReal fnorm, tol=1e-10; 452c4762a1bSJed Brown PetscScalar u1,u2,nf1,nf2,njac11,njac12,njac21,njac22; 453c4762a1bSJed Brown PetscScalar b=-0.5, t=0.5, l=-0.5, r=0.5; 454c4762a1bSJed Brown PetscScalar *boundary; 455c4762a1bSJed Brown AppCtx *user; 456c4762a1bSJed Brown DM da; 457c4762a1bSJed Brown 458c4762a1bSJed Brown PetscFunctionBeginUser; 459*5f80ce2aSJacob Faibussowitsch CHKERRQ(SNESGetDM(snes,&da)); 460*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscNew(&user)); 461c4762a1bSJed Brown *ouser = user; 462c4762a1bSJed Brown user->lb = .05; 463c4762a1bSJed Brown user->ub = PETSC_INFINITY; 464*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDAGetInfo(da,PETSC_IGNORE,&mx,&my,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE)); 465c4762a1bSJed Brown 466c4762a1bSJed Brown /* Check if lower and upper bounds are set */ 467*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsGetScalar(NULL,NULL, "-lb", &user->lb, 0)); 468*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsGetScalar(NULL,NULL, "-ub", &user->ub, 0)); 469c4762a1bSJed Brown bsize=mx+2; lsize=my+2; rsize=my+2; tsize=mx+2; 470c4762a1bSJed Brown 471*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscMalloc1(bsize, &user->bottom)); 472*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscMalloc1(tsize, &user->top)); 473*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscMalloc1(lsize, &user->left)); 474*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscMalloc1(rsize, &user->right)); 475c4762a1bSJed Brown 476c4762a1bSJed Brown hx= (r-l)/(mx+1.0); hy=(t-b)/(my+1.0); 477c4762a1bSJed Brown 478c4762a1bSJed Brown for (j=0; j<4; j++) { 479c4762a1bSJed Brown if (j==0) { 480c4762a1bSJed Brown yt = b; 481c4762a1bSJed Brown xt = l; 482c4762a1bSJed Brown limit = bsize; 483c4762a1bSJed Brown boundary = user->bottom; 484c4762a1bSJed Brown } else if (j==1) { 485c4762a1bSJed Brown yt = t; 486c4762a1bSJed Brown xt = l; 487c4762a1bSJed Brown limit = tsize; 488c4762a1bSJed Brown boundary = user->top; 489c4762a1bSJed Brown } else if (j==2) { 490c4762a1bSJed Brown yt = b; 491c4762a1bSJed Brown xt = l; 492c4762a1bSJed Brown limit = lsize; 493c4762a1bSJed Brown boundary = user->left; 494c4762a1bSJed Brown } else { /* if (j==3) */ 495c4762a1bSJed Brown yt = b; 496c4762a1bSJed Brown xt = r; 497c4762a1bSJed Brown limit = rsize; 498c4762a1bSJed Brown boundary = user->right; 499c4762a1bSJed Brown } 500c4762a1bSJed Brown 501c4762a1bSJed Brown for (i=0; i<limit; i++) { 502c4762a1bSJed Brown u1=xt; 503c4762a1bSJed Brown u2=-yt; 504c4762a1bSJed Brown for (k=0; k<maxits; k++) { 505c4762a1bSJed Brown nf1 = u1 + u1*u2*u2 - u1*u1*u1/three-xt; 506c4762a1bSJed Brown nf2 = -u2 - u1*u1*u2 + u2*u2*u2/three-yt; 507c4762a1bSJed Brown fnorm = PetscRealPart(PetscSqrtScalar(nf1*nf1+nf2*nf2)); 508c4762a1bSJed Brown if (fnorm <= tol) break; 509c4762a1bSJed Brown njac11=one+u2*u2-u1*u1; 510c4762a1bSJed Brown njac12=two*u1*u2; 511c4762a1bSJed Brown njac21=-two*u1*u2; 512c4762a1bSJed Brown njac22=-one - u1*u1 + u2*u2; 513c4762a1bSJed Brown det = njac11*njac22-njac21*njac12; 514c4762a1bSJed Brown u1 = u1-(njac22*nf1-njac12*nf2)/det; 515c4762a1bSJed Brown u2 = u2-(njac11*nf2-njac21*nf1)/det; 516c4762a1bSJed Brown } 517c4762a1bSJed Brown 518c4762a1bSJed Brown boundary[i]=u1*u1-u2*u2; 519c4762a1bSJed Brown if (j==0 || j==1) xt=xt+hx; 520c4762a1bSJed Brown else yt=yt+hy; /* if (j==2 || j==3) */ 521c4762a1bSJed Brown } 522c4762a1bSJed Brown } 523c4762a1bSJed Brown PetscFunctionReturn(0); 524c4762a1bSJed Brown } 525c4762a1bSJed Brown 526c4762a1bSJed Brown PetscErrorCode DestroyBoundaryConditions(AppCtx **ouser) 527c4762a1bSJed Brown { 528c4762a1bSJed Brown AppCtx *user = *ouser; 529c4762a1bSJed Brown 530c4762a1bSJed Brown PetscFunctionBeginUser; 531*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscFree(user->bottom)); 532*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscFree(user->top)); 533*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscFree(user->left)); 534*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscFree(user->right)); 535*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscFree(*ouser)); 536c4762a1bSJed Brown PetscFunctionReturn(0); 537c4762a1bSJed Brown } 538c4762a1bSJed Brown 539c4762a1bSJed Brown /* ------------------------------------------------------------------- */ 540c4762a1bSJed Brown /* 541c4762a1bSJed Brown ComputeInitialGuess - Calculates the initial guess 542c4762a1bSJed Brown 543c4762a1bSJed Brown Input Parameters: 544c4762a1bSJed Brown . user - user-defined application context 545c4762a1bSJed Brown . X - vector for initial guess 546c4762a1bSJed Brown 547c4762a1bSJed Brown Output Parameters: 548c4762a1bSJed Brown . X - newly computed initial guess 549c4762a1bSJed Brown */ 550c4762a1bSJed Brown PetscErrorCode ComputeInitialGuess(SNES snes, Vec X,void *dummy) 551c4762a1bSJed Brown { 552c4762a1bSJed Brown PetscInt i,j,mx,my; 553c4762a1bSJed Brown DM da; 554c4762a1bSJed Brown AppCtx *user; 555c4762a1bSJed Brown PetscScalar **x; 556c4762a1bSJed Brown PetscInt xs,xm,ys,ym; 557c4762a1bSJed Brown 558c4762a1bSJed Brown PetscFunctionBeginUser; 559*5f80ce2aSJacob Faibussowitsch CHKERRQ(SNESGetDM(snes,&da)); 560*5f80ce2aSJacob Faibussowitsch CHKERRQ(SNESGetApplicationContext(snes,&user)); 561c4762a1bSJed Brown 562*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDAGetCorners(da,&xs,&ys,NULL,&xm,&ym,NULL)); 563*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDAGetInfo(da,PETSC_IGNORE,&mx,&my,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE)); 564c4762a1bSJed Brown 565c4762a1bSJed Brown /* Get pointers to vector data */ 566*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDAVecGetArray(da,X,&x)); 567c4762a1bSJed Brown /* Perform local computations */ 568c4762a1bSJed Brown for (j=ys; j<ys+ym; j++) { 569c4762a1bSJed Brown for (i=xs; i< xs+xm; i++) { 570c4762a1bSJed Brown x[j][i] = (((j+1.0)*user->bottom[i+1]+(my-j+1.0)*user->top[i+1])/(my+2.0)+((i+1.0)*user->left[j+1]+(mx-i+1.0)*user->right[j+1])/(mx+2.0))/2.0; 571c4762a1bSJed Brown } 572c4762a1bSJed Brown } 573c4762a1bSJed Brown /* Restore vectors */ 574*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDAVecRestoreArray(da,X,&x)); 575c4762a1bSJed Brown PetscFunctionReturn(0); 576c4762a1bSJed Brown } 577c4762a1bSJed Brown 578c4762a1bSJed Brown /*TEST 579c4762a1bSJed Brown 580c4762a1bSJed Brown test: 581c4762a1bSJed Brown args: -snes_type vinewtonrsls -pc_type mg -ksp_monitor_short -pc_mg_galerkin pmat -da_refine 5 -snes_vi_monitor -pc_mg_type full -snes_max_it 100 -snes_converged_reason 582c4762a1bSJed Brown requires: !single 583c4762a1bSJed Brown 584c4762a1bSJed Brown test: 585c4762a1bSJed Brown suffix: 2 586c4762a1bSJed Brown args: -snes_type vinewtonssls -pc_type mg -ksp_monitor_short -pc_mg_galerkin pmat -da_refine 5 -snes_vi_monitor -pc_mg_type full -snes_max_it 100 -snes_converged_reason 587c4762a1bSJed Brown requires: !single 588c4762a1bSJed Brown 589c4762a1bSJed Brown TEST*/ 590