1 2 #include <petsc/private/bagimpl.h> /*I "petscbag.h" I*/ 3 #include <petscviewer.h> 4 5 /* 6 Adds item to the linked list in a bag 7 */ 8 static PetscErrorCode PetscBagRegister_Private(PetscBag bag,PetscBagItem item,const char *name,const char *help) 9 { 10 PetscErrorCode ierr; 11 12 PetscFunctionBegin; 13 ierr = PetscStrncpy(item->name,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 14 ierr = PetscStrncpy(item->help,help,PETSC_BAG_HELP_LENGTH-1);CHKERRQ(ierr); 15 if (!bag->bagitems) bag->bagitems = item; 16 else { 17 PetscBagItem nitem = bag->bagitems; 18 while (nitem->next) { 19 nitem = nitem->next; 20 } 21 nitem->next = item; 22 } 23 bag->count++; 24 PetscFunctionReturn(0); 25 } 26 27 /*@C 28 PetscBagRegisterEnum - add an enum value to the bag 29 30 Logically Collective on PetscBag 31 32 Input Parameter: 33 + bag - the bag of values 34 . addr - location of enum in struct 35 . mdefault - the initial value 36 . list - array of strings containing names of enum values followed by enum name followed by enum prefix 37 - help - longer string with more information about the value 38 39 Level: beginner 40 41 .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 42 PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 43 PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName() 44 45 @*/ 46 PetscErrorCode PetscBagRegisterEnum(PetscBag bag,void *addr,const char *const *list,PetscEnum mdefault, const char *name, const char *help) 47 { 48 PetscErrorCode ierr; 49 PetscBagItem item; 50 char nname[PETSC_BAG_NAME_LENGTH+1]; 51 PetscBool printhelp; 52 PetscInt i = 0; 53 54 PetscFunctionBegin; 55 nname[0] = '-'; 56 nname[1] = 0; 57 ierr = PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH);CHKERRQ(ierr); 58 ierr = PetscOptionsHasHelp(NULL,&printhelp);CHKERRQ(ierr); 59 if (printhelp) { 60 while (list[i++]) ; 61 ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%s>: (%s) %s (choose one of) ",bag->bagprefix ? bag->bagprefix : "",name,list[mdefault],list[i-3],help);CHKERRQ(ierr); 62 for (i=0; list[i+2]; i++) { 63 ierr = (*PetscHelpPrintf)(bag->bagcomm," %s",list[i]);CHKERRQ(ierr); 64 } 65 ierr = (*PetscHelpPrintf)(bag->bagcomm,"\n");CHKERRQ(ierr); 66 } 67 ierr = PetscOptionsGetEnum(NULL,bag->bagprefix,nname,list,&mdefault,NULL);CHKERRQ(ierr); 68 69 ierr = PetscNew(&item);CHKERRQ(ierr); 70 item->dtype = PETSC_ENUM; 71 item->offset = ((char*)addr) - ((char*)bag); 72 if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 73 item->next = NULL; 74 item->msize = 1; 75 ierr = PetscStrArrayallocpy(list,(char***)&item->list);CHKERRQ(ierr); 76 *(PetscEnum*)addr = mdefault; 77 ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 78 PetscFunctionReturn(0); 79 } 80 81 /*@C 82 PetscBagRegisterIntArray - add an integer value to the bag 83 84 Logically Collective on PetscBag 85 86 Input Parameter: 87 + bag - the bag of values 88 . addr - location of integer in struct 89 . msize - number of entries in array 90 . name - name of the integer array 91 - help - longer string with more information about the value 92 93 Level: beginner 94 95 .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 96 PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 97 PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 98 99 @*/ 100 PetscErrorCode PetscBagRegisterIntArray(PetscBag bag,void *addr,PetscInt msize, const char *name, const char *help) 101 { 102 PetscErrorCode ierr; 103 PetscBagItem item; 104 char nname[PETSC_BAG_NAME_LENGTH+1]; 105 PetscBool printhelp; 106 PetscInt i,tmp = msize; 107 108 PetscFunctionBegin; 109 nname[0] = '-'; 110 nname[1] = 0; 111 ierr = PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH);CHKERRQ(ierr); 112 ierr = PetscOptionsHasHelp(NULL,&printhelp);CHKERRQ(ierr); 113 if (printhelp) { 114 ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <",bag->bagprefix ? bag->bagprefix : "",name);CHKERRQ(ierr); 115 for (i=0; i<msize; i++) { 116 ierr = (*PetscHelpPrintf)(bag->bagcomm,"%D ",*((PetscInt*)addr)+i);CHKERRQ(ierr); 117 } 118 ierr = (*PetscHelpPrintf)(bag->bagcomm,">: %s \n",help);CHKERRQ(ierr); 119 } 120 ierr = PetscOptionsGetIntArray(NULL,bag->bagprefix,nname,(PetscInt*)addr,&tmp,NULL);CHKERRQ(ierr); 121 122 ierr = PetscNew(&item);CHKERRQ(ierr); 123 item->dtype = PETSC_INT; 124 item->offset = ((char*)addr) - ((char*)bag); 125 if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 126 item->next = NULL; 127 item->msize = msize; 128 ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 129 PetscFunctionReturn(0); 130 } 131 132 /*@C 133 PetscBagRegisterRealArray - add an real array to the bag 134 135 Logically Collective on PetscBag 136 137 Input Parameter: 138 + bag - the bag of values 139 . addr - location of real array in struct 140 . msize - number of entries in array 141 . name - name of the integer array 142 - help - longer string with more information about the value 143 144 Level: beginner 145 146 .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 147 PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 148 PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 149 150 @*/ 151 PetscErrorCode PetscBagRegisterRealArray(PetscBag bag,void *addr,PetscInt msize, const char *name, const char *help) 152 { 153 PetscErrorCode ierr; 154 PetscBagItem item; 155 char nname[PETSC_BAG_NAME_LENGTH+1]; 156 PetscBool printhelp; 157 PetscInt i,tmp = msize; 158 159 PetscFunctionBegin; 160 nname[0] = '-'; 161 nname[1] = 0; 162 ierr = PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH);CHKERRQ(ierr); 163 ierr = PetscOptionsHasHelp(NULL,&printhelp);CHKERRQ(ierr); 164 if (printhelp) { 165 ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <",bag->bagprefix ? bag->bagprefix : "",name);CHKERRQ(ierr); 166 for (i=0; i<msize; i++) { 167 ierr = (*PetscHelpPrintf)(bag->bagcomm,"%g ",(double)*((PetscReal*)addr)+i);CHKERRQ(ierr); 168 } 169 ierr = (*PetscHelpPrintf)(bag->bagcomm,">: %s \n",help);CHKERRQ(ierr); 170 } 171 ierr = PetscOptionsGetRealArray(NULL,bag->bagprefix,nname,(PetscReal*)addr,&tmp,NULL);CHKERRQ(ierr); 172 173 ierr = PetscNew(&item);CHKERRQ(ierr); 174 item->dtype = PETSC_REAL; 175 item->offset = ((char*)addr) - ((char*)bag); 176 if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 177 item->next = NULL; 178 item->msize = msize; 179 ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 180 PetscFunctionReturn(0); 181 } 182 183 /*@C 184 PetscBagRegisterInt - add an integer value to the bag 185 186 Logically Collective on PetscBag 187 188 Input Parameter: 189 + bag - the bag of values 190 . addr - location of integer in struct 191 . mdefault - the initial value 192 . name - name of the integer 193 - help - longer string with more information about the value 194 195 Level: beginner 196 197 .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 198 PetscBagRegisterInt64(), PetscBagRegisterBool(), PetscBagRegisterScalar() 199 PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 200 201 @*/ 202 PetscErrorCode PetscBagRegisterInt(PetscBag bag,void *addr,PetscInt mdefault,const char *name,const char *help) 203 { 204 PetscErrorCode ierr; 205 PetscBagItem item; 206 char nname[PETSC_BAG_NAME_LENGTH+1]; 207 PetscBool printhelp; 208 209 PetscFunctionBegin; 210 nname[0] = '-'; 211 nname[1] = 0; 212 ierr = PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH);CHKERRQ(ierr); 213 ierr = PetscOptionsHasHelp(NULL,&printhelp);CHKERRQ(ierr); 214 if (printhelp) { 215 ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%d>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,mdefault,help);CHKERRQ(ierr); 216 } 217 ierr = PetscOptionsGetInt(NULL,bag->bagprefix,nname,&mdefault,NULL);CHKERRQ(ierr); 218 219 ierr = PetscNew(&item);CHKERRQ(ierr); 220 item->dtype = PETSC_INT; 221 item->offset = ((char*)addr) - ((char*)bag); 222 if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 223 item->next = NULL; 224 item->msize = 1; 225 *(PetscInt*)addr = mdefault; 226 ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 227 PetscFunctionReturn(0); 228 } 229 230 /*@C 231 PetscBagRegisterInt64 - add an integer value to the bag 232 233 Logically Collective on PetscBag 234 235 Input Parameter: 236 + bag - the bag of values 237 . addr - location of integer in struct 238 . mdefault - the initial value 239 . name - name of the integer 240 - help - longer string with more information about the value 241 242 Level: beginner 243 244 .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 245 PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 246 PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 247 248 @*/ 249 PetscErrorCode PetscBagRegisterInt64(PetscBag bag,void *addr,PetscInt64 mdefault,const char *name,const char *help) 250 { 251 PetscErrorCode ierr; 252 PetscBagItem item; 253 char nname[PETSC_BAG_NAME_LENGTH+1]; 254 PetscBool printhelp; 255 PetscInt odefault = (PetscInt)mdefault; 256 PetscBool flg; 257 258 PetscFunctionBegin; 259 nname[0] = '-'; 260 nname[1] = 0; 261 ierr = PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH);CHKERRQ(ierr); 262 ierr = PetscOptionsHasHelp(NULL,&printhelp);CHKERRQ(ierr); 263 if (printhelp) { 264 ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%d>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,odefault,help);CHKERRQ(ierr); 265 } 266 ierr = PetscOptionsGetInt(NULL,bag->bagprefix,nname,&odefault,&flg);CHKERRQ(ierr); 267 if (flg) mdefault = (PetscInt64)odefault; 268 269 ierr = PetscNew(&item);CHKERRQ(ierr); 270 item->dtype = PETSC_INT; 271 item->offset = ((char*)addr) - ((char*)bag); 272 if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 273 item->next = NULL; 274 item->msize = 1; 275 *(PetscInt64*)addr = mdefault; 276 ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 277 PetscFunctionReturn(0); 278 } 279 280 /*@C 281 PetscBagRegisterBoolArray - add a n logical values to the bag 282 283 Logically Collective on PetscBag 284 285 Input Parameter: 286 + bag - the bag of values 287 . addr - location of boolean array in struct 288 . msize - number of entries in array 289 . name - name of the boolean array 290 - help - longer string with more information about the value 291 292 Level: beginner 293 294 .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 295 PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 296 PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 297 298 @*/ 299 PetscErrorCode PetscBagRegisterBoolArray(PetscBag bag,void *addr,PetscInt msize, const char* name, const char* help) 300 { 301 PetscErrorCode ierr; 302 PetscBagItem item; 303 char nname[PETSC_BAG_NAME_LENGTH+1]; 304 PetscBool printhelp; 305 PetscInt i,tmp = msize; 306 307 PetscFunctionBegin; 308 nname[0] = '-'; 309 nname[1] = 0; 310 ierr = PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH);CHKERRQ(ierr); 311 ierr = PetscOptionsHasHelp(NULL,&printhelp);CHKERRQ(ierr); 312 if (printhelp) { 313 ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <",bag->bagprefix?bag->bagprefix:"",name);CHKERRQ(ierr); 314 for (i=0; i<msize; i++) { 315 ierr = (*PetscHelpPrintf)(bag->bagcomm,"%D ",*((PetscInt*)addr)+i);CHKERRQ(ierr); 316 } 317 ierr = (*PetscHelpPrintf)(bag->bagcomm,">: %s \n",help);CHKERRQ(ierr); 318 } 319 ierr = PetscOptionsGetBoolArray(NULL,bag->bagprefix,nname,(PetscBool*)addr,&tmp,NULL);CHKERRQ(ierr); 320 321 ierr = PetscNew(&item);CHKERRQ(ierr); 322 item->dtype = PETSC_BOOL; 323 item->offset = ((char*)addr) - ((char*)bag); 324 if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 325 item->next = NULL; 326 item->msize = msize; 327 ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 328 PetscFunctionReturn(0); 329 } 330 331 /*@C 332 PetscBagRegisterString - add a string value to the bag 333 334 Logically Collective on PetscBag 335 336 Input Parameter: 337 + bag - the bag of values 338 . addr - location of start of string in struct 339 . msize - length of the string space in the struct 340 . mdefault - the initial value 341 . name - name of the string 342 - help - longer string with more information about the value 343 344 Level: beginner 345 346 Note: The struct should have the field char mystring[msize]; not char *mystring 347 348 .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 349 PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 350 PetscBagSetFromOptions(),PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 351 352 @*/ 353 PetscErrorCode PetscBagRegisterString(PetscBag bag,void *addr,PetscInt msize,const char* mdefault,const char* name,const char* help) 354 { 355 PetscErrorCode ierr; 356 PetscBagItem item; 357 char nname[PETSC_BAG_NAME_LENGTH+1]; 358 PetscBool printhelp; 359 360 PetscFunctionBegin; 361 nname[0] = '-'; 362 nname[1] = 0; 363 ierr = PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH);CHKERRQ(ierr); 364 ierr = PetscOptionsHasHelp(NULL,&printhelp);CHKERRQ(ierr); 365 if (printhelp) { 366 ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%s>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,mdefault,help);CHKERRQ(ierr); 367 } 368 369 ierr = PetscNew(&item);CHKERRQ(ierr); 370 item->dtype = PETSC_CHAR; 371 item->offset = ((char*)addr) - ((char*)bag); 372 if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 373 item->next = NULL; 374 item->msize = msize; 375 if (mdefault != (char*)addr) { 376 ierr = PetscStrncpy((char*)addr,mdefault,msize-1);CHKERRQ(ierr); 377 } 378 ierr = PetscOptionsGetString(NULL,bag->bagprefix,nname,(char*)addr,msize,NULL);CHKERRQ(ierr); 379 ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 380 PetscFunctionReturn(0); 381 } 382 383 /*@C 384 PetscBagRegisterReal - add a real value to the bag 385 386 Logically Collective on PetscBag 387 388 Input Parameter: 389 + bag - the bag of values 390 . addr - location of double in struct 391 . mdefault - the initial value 392 . name - name of the variable 393 - help - longer string with more information about the value 394 395 Level: beginner 396 397 .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 398 PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 399 PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 400 401 @*/ 402 PetscErrorCode PetscBagRegisterReal(PetscBag bag,void *addr,PetscReal mdefault, const char *name, const char *help) 403 { 404 PetscErrorCode ierr; 405 PetscBagItem item; 406 char nname[PETSC_BAG_NAME_LENGTH+1]; 407 PetscBool printhelp; 408 409 PetscFunctionBegin; 410 nname[0] = '-'; 411 nname[1] = 0; 412 ierr = PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH);CHKERRQ(ierr); 413 ierr = PetscOptionsHasHelp(NULL,&printhelp);CHKERRQ(ierr); 414 if (printhelp) { 415 ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%g>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,(double)mdefault,help);CHKERRQ(ierr); 416 } 417 ierr = PetscOptionsGetReal(NULL,bag->bagprefix,nname,&mdefault,NULL);CHKERRQ(ierr); 418 419 ierr = PetscNew(&item);CHKERRQ(ierr); 420 item->dtype = PETSC_REAL; 421 item->offset = ((char*)addr) - ((char*)bag); 422 if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 423 item->next = NULL; 424 item->msize = 1; 425 *(PetscReal*)addr = mdefault; 426 ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 427 PetscFunctionReturn(0); 428 } 429 430 /*@C 431 PetscBagRegisterScalar - add a real or complex number value to the bag 432 433 Logically Collective on PetscBag 434 435 Input Parameter: 436 + bag - the bag of values 437 . addr - location of scalar in struct 438 . mdefault - the initial value 439 . name - name of the variable 440 - help - longer string with more information about the value 441 442 Level: beginner 443 444 .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 445 PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 446 PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 447 448 @*/ 449 PetscErrorCode PetscBagRegisterScalar(PetscBag bag,void *addr,PetscScalar mdefault,const char *name,const char *help) 450 { 451 PetscErrorCode ierr; 452 PetscBagItem item; 453 char nname[PETSC_BAG_NAME_LENGTH+1]; 454 PetscBool printhelp; 455 456 PetscFunctionBegin; 457 nname[0] = '-'; 458 nname[1] = 0; 459 ierr = PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH);CHKERRQ(ierr); 460 ierr = PetscOptionsHasHelp(NULL,&printhelp);CHKERRQ(ierr); 461 if (printhelp) { 462 ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%g + %gi>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,(double)PetscRealPart(mdefault),(double)PetscImaginaryPart(mdefault),help);CHKERRQ(ierr); 463 } 464 ierr = PetscOptionsGetScalar(NULL,bag->bagprefix,nname,&mdefault,NULL);CHKERRQ(ierr); 465 466 ierr = PetscNew(&item);CHKERRQ(ierr); 467 item->dtype = PETSC_SCALAR; 468 item->offset = ((char*)addr) - ((char*)bag); 469 if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 470 item->next = NULL; 471 item->msize = 1; 472 *(PetscScalar*)addr = mdefault; 473 ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 474 PetscFunctionReturn(0); 475 } 476 477 /*@C 478 PetscBagRegisterBool - add a logical value to the bag 479 480 Logically Collective on PetscBag 481 482 Input Parameter: 483 + bag - the bag of values 484 . addr - location of logical in struct 485 . mdefault - the initial value 486 . name - name of the variable 487 - help - longer string with more information about the value 488 489 Level: beginner 490 491 .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 492 PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 493 PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 494 495 @*/ 496 PetscErrorCode PetscBagRegisterBool(PetscBag bag,void *addr,PetscBool mdefault,const char *name,const char *help) 497 { 498 PetscErrorCode ierr; 499 PetscBagItem item; 500 char nname[PETSC_BAG_NAME_LENGTH+1]; 501 PetscBool printhelp; 502 503 PetscFunctionBegin; 504 /* the checks here with != PETSC_FALSE and PETSC_TRUE is a special case; here we truly demand that the value be 0 or 1 */ 505 if (mdefault != PETSC_FALSE && mdefault != PETSC_TRUE) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Boolean %s %s must be boolean; integer value %d",name,help,(int)mdefault); 506 nname[0] = '-'; 507 nname[1] = 0; 508 ierr = PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH);CHKERRQ(ierr); 509 ierr = PetscOptionsHasHelp(NULL,&printhelp);CHKERRQ(ierr); 510 if (printhelp) { 511 ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%s>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,PetscBools[mdefault],help);CHKERRQ(ierr); 512 } 513 ierr = PetscOptionsGetBool(NULL,bag->bagprefix,nname,&mdefault,NULL);CHKERRQ(ierr); 514 515 ierr = PetscNew(&item);CHKERRQ(ierr); 516 item->dtype = PETSC_BOOL; 517 item->offset = ((char*)addr) - ((char*)bag); 518 if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 519 item->next = NULL; 520 item->msize = 1; 521 *(PetscBool*)addr = mdefault; 522 ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 523 PetscFunctionReturn(0); 524 } 525 526 /*@C 527 PetscBagDestroy - Destroys a bag values 528 529 Collective on PetscBag 530 531 Input Parameter: 532 . bag - the bag of values 533 534 Level: beginner 535 536 .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 537 PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 538 PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 539 540 @*/ 541 PetscErrorCode PetscBagDestroy(PetscBag *bag) 542 { 543 PetscErrorCode ierr; 544 PetscBagItem nitem = (*bag)->bagitems,item; 545 546 PetscFunctionBegin; 547 while (nitem) { 548 item = nitem->next; 549 if (nitem->list) { 550 ierr = PetscStrArrayDestroy(&nitem->list);CHKERRQ(ierr); 551 } 552 ierr = PetscFree(nitem);CHKERRQ(ierr); 553 nitem = item; 554 } 555 if ((*bag)->bagprefix) { ierr = PetscFree((*bag)->bagprefix);CHKERRQ(ierr); } 556 ierr = PetscFree(*bag);CHKERRQ(ierr); 557 PetscFunctionReturn(0); 558 } 559 560 /*@ 561 PetscBagSetFromOptions - Allows setting options from a bag 562 563 Collective on PetscBag 564 565 Input Parameter: 566 . bag - the bag of values 567 568 Level: beginner 569 570 .seealso: PetscBag, PetscBagSetName(), PetscBagDestroy(), PetscBagLoad(), PetscBagGetData() 571 PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 572 PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagView(), PetscBagRegisterEnum() 573 574 @*/ 575 PetscErrorCode PetscBagSetFromOptions(PetscBag bag) 576 { 577 PetscErrorCode ierr; 578 PetscBagItem nitem = bag->bagitems; 579 char name[PETSC_BAG_NAME_LENGTH+1],helpname[PETSC_BAG_NAME_LENGTH+PETSC_BAG_HELP_LENGTH+3]; 580 PetscInt n; 581 582 PetscFunctionBegin; 583 ierr = PetscStrncpy(helpname,bag->bagname,sizeof(helpname));CHKERRQ(ierr); 584 ierr = PetscStrlcat(helpname," ",sizeof(helpname));CHKERRQ(ierr); 585 ierr = PetscStrlcat(helpname,bag->baghelp,sizeof(helpname));CHKERRQ(ierr); 586 ierr = PetscOptionsBegin(bag->bagcomm,bag->bagprefix,helpname,NULL);CHKERRQ(ierr); 587 while (nitem) { 588 name[0] = '-'; 589 name[1] = 0; 590 ierr = PetscStrlcat(name,nitem->name,sizeof(name));CHKERRQ(ierr); 591 if (nitem->dtype == PETSC_CHAR) { /* special handling for fortran required? [due to space padding vs null termination] */ 592 char *value = (char*)(((char*)bag) + nitem->offset); 593 ierr = PetscOptionsString(name,nitem->help,"",value,value,nitem->msize,NULL);CHKERRQ(ierr); 594 } else if (nitem->dtype == PETSC_REAL) { 595 PetscReal *value = (PetscReal*)(((char*)bag) + nitem->offset); 596 if (nitem->msize == 1) { 597 ierr = PetscOptionsReal(name,nitem->help,"",*value,value,NULL);CHKERRQ(ierr); 598 } else { 599 n = nitem->msize; 600 ierr = PetscOptionsRealArray(name,nitem->help,"",value,&n,NULL);CHKERRQ(ierr); 601 } 602 } else if (nitem->dtype == PETSC_SCALAR) { 603 PetscScalar *value = (PetscScalar*)(((char*)bag) + nitem->offset); 604 ierr = PetscOptionsScalar(name,nitem->help,"",*value,value,NULL);CHKERRQ(ierr); 605 } else if (nitem->dtype == PETSC_INT) { 606 PetscInt *value = (PetscInt*)(((char*)bag) + nitem->offset); 607 if (nitem->msize == 1) { 608 ierr = PetscOptionsInt(name,nitem->help,"",*value,value,NULL);CHKERRQ(ierr); 609 } else { 610 n = nitem->msize; 611 ierr = PetscOptionsIntArray(name,nitem->help,"",value,&n,NULL);CHKERRQ(ierr); 612 } 613 } else if (nitem->dtype == PETSC_ENUM) { 614 PetscEnum *value = (PetscEnum*)(((char*)bag) + nitem->offset); 615 PetscInt i = 0; 616 while (nitem->list[i++]) ; 617 ierr = PetscOptionsEnum(name,nitem->help,nitem->list[i-3],(const char*const*)nitem->list,*value,value,NULL);CHKERRQ(ierr); 618 } else if (nitem->dtype == PETSC_BOOL) { 619 PetscBool *value = (PetscBool*)(((char*)bag) + nitem->offset); 620 if (nitem->msize == 1) { 621 ierr = PetscOptionsBool(name,nitem->help,"",*value,value,NULL);CHKERRQ(ierr); 622 } else { 623 n = nitem->msize; 624 ierr = PetscOptionsBoolArray(name,nitem->help,"",value,&n,NULL);CHKERRQ(ierr); 625 } 626 } 627 nitem = nitem->next; 628 } 629 PetscOptionsEnd(); 630 PetscFunctionReturn(0); 631 } 632 633 /*@C 634 PetscBagView - Views a bag of values as either ASCII text or a binary file 635 636 Collective on PetscBag 637 638 Input Parameter: 639 + bag - the bag of values 640 - viewer - location to view the values 641 642 Level: beginner 643 644 Warning: Currently PETSc bags saved in a binary file can only be read back 645 in on a machine of the same architecture. Let us know when this is a problem 646 and we'll fix it. 647 648 .seealso: PetscBag, PetscBagSetName(), PetscBagDestroy(), PetscBagLoad(), PetscBagGetData() 649 PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar(), PetscBagRegisterEnum() 650 PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName() 651 652 @*/ 653 PetscErrorCode PetscBagView(PetscBag bag,PetscViewer view) 654 { 655 PetscBool isascii,isbinary; 656 PetscErrorCode ierr; 657 PetscBagItem nitem = bag->bagitems; 658 659 PetscFunctionBegin; 660 ierr = PetscObjectTypeCompare((PetscObject)view,PETSCVIEWERASCII,&isascii);CHKERRQ(ierr); 661 ierr = PetscObjectTypeCompare((PetscObject)view,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr); 662 if (isascii) { 663 if (bag->bagprefix) { 664 ierr = PetscViewerASCIIPrintf(view,"PetscBag Object: %s (%s) %s\n",bag->bagname,bag->bagprefix,bag->baghelp);CHKERRQ(ierr); 665 } else { 666 ierr = PetscViewerASCIIPrintf(view,"PetscBag Object: %s %s\n",bag->bagname,bag->baghelp);CHKERRQ(ierr); 667 } 668 while (nitem) { 669 if (nitem->dtype == PETSC_CHAR) { 670 char *value = (char*)(((char*)bag) + nitem->offset); 671 char tmp = value[nitem->msize-1]; /* special handling for fortran chars wihout null terminator */ 672 value[nitem->msize-1] =0; 673 ierr = PetscViewerASCIIPrintf(view," %s = %s; %s\n",nitem->name,value,nitem->help);CHKERRQ(ierr); 674 value[nitem->msize-1] = tmp; 675 } else if (nitem->dtype == PETSC_REAL) { 676 PetscReal *value = (PetscReal*)(((char*)bag) + nitem->offset); 677 PetscInt i; 678 ierr = PetscViewerASCIIPrintf(view," %s = ",nitem->name);CHKERRQ(ierr); 679 for (i=0; i<nitem->msize; i++) { 680 ierr = PetscViewerASCIIPrintf(view,"%g ",(double)value[i]);CHKERRQ(ierr); 681 } 682 ierr = PetscViewerASCIIPrintf(view,"; %s\n",nitem->help);CHKERRQ(ierr); 683 } else if (nitem->dtype == PETSC_SCALAR) { 684 PetscScalar value = *(PetscScalar*)(((char*)bag) + nitem->offset); 685 #if defined(PETSC_USE_COMPLEX) 686 if ((double)PetscImaginaryPart(value)) { 687 ierr = PetscViewerASCIIPrintf(view," %s = %g + %gi; %s\n",nitem->name,(double)PetscRealPart(value),(double)PetscImaginaryPart(value),nitem->help);CHKERRQ(ierr); 688 } else { 689 ierr = PetscViewerASCIIPrintf(view," %s = %g; %s\n",nitem->name,(double)PetscRealPart(value),nitem->help);CHKERRQ(ierr); 690 } 691 #else 692 ierr = PetscViewerASCIIPrintf(view," %s = %g; %s\n",nitem->name,(double)value,nitem->help);CHKERRQ(ierr); 693 #endif 694 } else if (nitem->dtype == PETSC_INT) { 695 PetscInt i,*value = (PetscInt*)(((char*)bag) + nitem->offset); 696 ierr = PetscViewerASCIIPrintf(view," %s = ",nitem->name);CHKERRQ(ierr); 697 for (i=0; i<nitem->msize; i++) { 698 ierr = PetscViewerASCIIPrintf(view,"%D ",value[i]);CHKERRQ(ierr); 699 } 700 ierr = PetscViewerASCIIPrintf(view,"; %s\n",nitem->help);CHKERRQ(ierr); 701 } else if (nitem->dtype == PETSC_BOOL) { 702 PetscBool *value = (PetscBool*)(((char*)bag) + nitem->offset); 703 PetscInt i; 704 /* some Fortran compilers use -1 as boolean */ 705 ierr = PetscViewerASCIIPrintf(view," %s = ",nitem->name);CHKERRQ(ierr); 706 for (i=0; i<nitem->msize; i++) { 707 if (((int) value[i]) == -1) value[i] = PETSC_TRUE; 708 /* the checks here with != PETSC_FALSE and PETSC_TRUE is a special case; here we truly demand that the value be 0 or 1 */ 709 if (value[i] != PETSC_FALSE && value[i] != PETSC_TRUE) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Boolean value for %s %s is corrupt; integer value %d",nitem->name,nitem->help,value); 710 ierr = PetscViewerASCIIPrintf(view," %s",PetscBools[value[i]]);CHKERRQ(ierr); 711 } 712 ierr = PetscViewerASCIIPrintf(view,"; %s\n",nitem->help);CHKERRQ(ierr); 713 } else if (nitem->dtype == PETSC_ENUM) { 714 PetscEnum value = *(PetscEnum*)(((char*)bag) + nitem->offset); 715 PetscInt i = 0; 716 while (nitem->list[i++]) ; 717 ierr = PetscViewerASCIIPrintf(view," %s = %s; (%s) %s\n",nitem->name,nitem->list[value],nitem->list[i-3],nitem->help);CHKERRQ(ierr); 718 } 719 nitem = nitem->next; 720 } 721 } else if (isbinary) { 722 PetscInt classid = PETSC_BAG_FILE_CLASSID, dtype; 723 PetscInt deprecatedbagsize = 0; 724 PetscViewerFormat format; 725 ierr = PetscViewerBinaryWrite(view,&classid,1,PETSC_INT);CHKERRQ(ierr); 726 ierr = PetscViewerBinaryWrite(view,&deprecatedbagsize,1,PETSC_INT);CHKERRQ(ierr); 727 ierr = PetscViewerBinaryWrite(view,&bag->count,1,PETSC_INT);CHKERRQ(ierr); 728 ierr = PetscViewerBinaryWrite(view,bag->bagname,PETSC_BAG_NAME_LENGTH,PETSC_CHAR);CHKERRQ(ierr); 729 ierr = PetscViewerBinaryWrite(view,bag->baghelp,PETSC_BAG_HELP_LENGTH,PETSC_CHAR);CHKERRQ(ierr); 730 while (nitem) { 731 ierr = PetscViewerBinaryWrite(view,&nitem->offset,1,PETSC_INT);CHKERRQ(ierr); 732 dtype = (PetscInt)nitem->dtype; 733 ierr = PetscViewerBinaryWrite(view,&dtype,1,PETSC_INT);CHKERRQ(ierr); 734 ierr = PetscViewerBinaryWrite(view,nitem->name,PETSC_BAG_NAME_LENGTH,PETSC_CHAR);CHKERRQ(ierr); 735 ierr = PetscViewerBinaryWrite(view,nitem->help,PETSC_BAG_HELP_LENGTH,PETSC_CHAR);CHKERRQ(ierr); 736 ierr = PetscViewerBinaryWrite(view,&nitem->msize,1,PETSC_INT);CHKERRQ(ierr); 737 /* some Fortran compilers use -1 as boolean */ 738 if (dtype == PETSC_BOOL && ((*(int*) (((char*)bag) + nitem->offset) == -1))) *(int*) (((char*)bag) + nitem->offset) = PETSC_TRUE; 739 740 ierr = PetscViewerBinaryWrite(view,(((char*)bag) + nitem->offset),nitem->msize,nitem->dtype);CHKERRQ(ierr); 741 if (dtype == PETSC_ENUM) { 742 ierr = PetscViewerBinaryWriteStringArray(view,(const char* const*)nitem->list);CHKERRQ(ierr); 743 } 744 nitem = nitem->next; 745 } 746 ierr = PetscViewerGetFormat(view,&format);CHKERRQ(ierr); 747 if (format == PETSC_VIEWER_BINARY_MATLAB) { 748 MPI_Comm comm; 749 FILE *info; 750 ierr = PetscObjectGetComm((PetscObject)view,&comm);CHKERRQ(ierr); 751 ierr = PetscViewerBinaryGetInfoPointer(view,&info);CHKERRQ(ierr); 752 ierr = PetscFPrintf(comm,info,"#--- begin code written by PetscViewerBinary for MATLAB format ---#\n");CHKERRQ(ierr); 753 ierr = PetscFPrintf(comm,info,"#$$ Set.%s = PetscBinaryRead(fd);\n",bag->bagname);CHKERRQ(ierr); 754 ierr = PetscFPrintf(comm,info,"#--- end code written by PetscViewerBinary for MATLAB format ---#\n\n");CHKERRQ(ierr); 755 } 756 } 757 PetscFunctionReturn(0); 758 } 759 760 /*@C 761 PetscBagViewFromOptions - Processes command line options to determine if/how a PetscBag is to be viewed. 762 763 Collective on PetscBag 764 765 Input Parameters: 766 + obj - the object 767 . bobj - optional other object that provides prefix (if NULL then the prefix in obj is used) 768 - optionname - option to activate viewing 769 770 Level: intermediate 771 772 .seealso: PetscBagCreate(), PetscBag, PetscViewer 773 @*/ 774 PetscErrorCode PetscBagViewFromOptions(PetscBag bag, PetscObject bobj, const char optionname[]) 775 { 776 static PetscBool incall = PETSC_FALSE; 777 PetscViewer viewer; 778 PetscViewerFormat format; 779 const char *prefix, *bprefix = NULL; 780 PetscBool flg; 781 PetscErrorCode ierr; 782 783 PetscFunctionBegin; 784 if (incall) PetscFunctionReturn(0); 785 incall = PETSC_TRUE; 786 if (bobj) {ierr = PetscObjectGetOptionsPrefix(bobj, &bprefix);CHKERRQ(ierr);} 787 prefix = bobj ? bprefix : bag->bagprefix; 788 ierr = PetscOptionsGetViewer(bag->bagcomm, NULL, prefix, optionname, &viewer, &format, &flg);CHKERRQ(ierr); 789 if (flg) { 790 ierr = PetscViewerPushFormat(viewer, format);CHKERRQ(ierr); 791 ierr = PetscBagView(bag, viewer);CHKERRQ(ierr); 792 ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 793 ierr = PetscViewerPopFormat(viewer);CHKERRQ(ierr); 794 ierr = PetscViewerDestroy(&viewer);CHKERRQ(ierr); 795 } 796 incall = PETSC_FALSE; 797 PetscFunctionReturn(0); 798 } 799 800 /*@C 801 PetscBagLoad - Loads a bag of values from a binary file 802 803 Collective on PetscViewer 804 805 Input Parameter: 806 + viewer - file to load values from 807 - bag - the bag of values 808 809 Notes: 810 You must have created and registered all the fields in the bag before loading into it. 811 812 Notes: 813 Level: beginner 814 815 .seealso: PetscBag, PetscBagSetName(), PetscBagDestroy(), PetscBagView(), PetscBagGetData() 816 PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 817 PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 818 819 @*/ 820 PetscErrorCode PetscBagLoad(PetscViewer view,PetscBag bag) 821 { 822 PetscErrorCode ierr; 823 PetscBool isbinary; 824 PetscInt classid,bagcount,i,dtype,msize,offset,deprecatedbagsize; 825 char name[PETSC_BAG_NAME_LENGTH],help[PETSC_BAG_HELP_LENGTH],**list; 826 PetscBagItem nitem; 827 MPI_Comm comm; 828 PetscMPIInt flag; 829 830 PetscFunctionBegin; 831 ierr = PetscObjectGetComm((PetscObject)view,&comm);CHKERRQ(ierr); 832 ierr = MPI_Comm_compare(comm,bag->bagcomm,&flag);CHKERRMPI(ierr); 833 if (flag != MPI_CONGRUENT && flag != MPI_IDENT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NOTSAMECOMM,"Different communicators in the viewer and bag"); \ 834 ierr = PetscObjectTypeCompare((PetscObject)view,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr); 835 if (!isbinary) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"No support for this viewer type"); 836 837 ierr = PetscViewerBinaryRead(view,&classid,1,NULL,PETSC_INT);CHKERRQ(ierr); 838 if (classid != PETSC_BAG_FILE_CLASSID) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Not PetscBag next in binary file"); 839 ierr = PetscViewerBinaryRead(view,&deprecatedbagsize,1,NULL,PETSC_INT);CHKERRQ(ierr); 840 ierr = PetscViewerBinaryRead(view,&bagcount,1,NULL,PETSC_INT);CHKERRQ(ierr); 841 if (bagcount != bag->count) SETERRQ2(comm,PETSC_ERR_ARG_INCOMP,"Bag in file has different number of entries %d then passed in bag %d\n",(int)bagcount,(int)bag->count); 842 ierr = PetscViewerBinaryRead(view,bag->bagname,PETSC_BAG_NAME_LENGTH,NULL,PETSC_CHAR);CHKERRQ(ierr); 843 ierr = PetscViewerBinaryRead(view,bag->baghelp,PETSC_BAG_HELP_LENGTH,NULL,PETSC_CHAR);CHKERRQ(ierr); 844 845 nitem = bag->bagitems; 846 for (i=0; i<bagcount; i++) { 847 ierr = PetscViewerBinaryRead(view,&offset,1,NULL,PETSC_INT);CHKERRQ(ierr); 848 /* ignore the offset in the file */ 849 ierr = PetscViewerBinaryRead(view,&dtype,1,NULL,PETSC_INT);CHKERRQ(ierr); 850 ierr = PetscViewerBinaryRead(view,name,PETSC_BAG_NAME_LENGTH,NULL,PETSC_CHAR);CHKERRQ(ierr); 851 ierr = PetscViewerBinaryRead(view,help,PETSC_BAG_HELP_LENGTH,NULL,PETSC_CHAR);CHKERRQ(ierr); 852 ierr = PetscViewerBinaryRead(view,&msize,1,NULL,PETSC_INT);CHKERRQ(ierr); 853 854 if (dtype == (PetscInt) PETSC_CHAR) { 855 ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_CHAR);CHKERRQ(ierr); 856 } else if (dtype == (PetscInt) PETSC_REAL) { 857 ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_REAL);CHKERRQ(ierr); 858 } else if (dtype == (PetscInt) PETSC_SCALAR) { 859 ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,1,NULL,PETSC_SCALAR);CHKERRQ(ierr); 860 } else if (dtype == (PetscInt) PETSC_INT) { 861 ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_INT);CHKERRQ(ierr); 862 } else if (dtype == (PetscInt) PETSC_BOOL) { 863 ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_BOOL);CHKERRQ(ierr); 864 } else if (dtype == (PetscInt) PETSC_ENUM) { 865 ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,1,NULL,PETSC_ENUM);CHKERRQ(ierr); 866 ierr = PetscViewerBinaryReadStringArray(view,&list);CHKERRQ(ierr); 867 /* don't need to save list because it is already registered in the bag */ 868 ierr = PetscFree(list);CHKERRQ(ierr); 869 } 870 nitem = nitem->next; 871 } 872 PetscFunctionReturn(0); 873 } 874 875 /*@C 876 PetscBagCreate - Create a bag of values 877 878 Collective 879 880 Level: Intermediate 881 882 Input Parameters: 883 + comm - communicator to share bag 884 - bagsize - size of the C structure holding the values 885 886 Output Parameter: 887 . bag - the bag of values 888 889 Notes: 890 The size of the A struct must be small enough to fit in a PetscInt; by default 891 PetscInt is 4 bytes; this means a bag cannot be larger than 2 gigabytes in length. 892 The warning about casting to a shorter length can be ignored below unless your A struct is too large 893 894 .seealso: PetscBag, PetscBagGetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 895 PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 896 PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum() 897 @*/ 898 PetscErrorCode PetscBagCreate(MPI_Comm comm, size_t bagsize, PetscBag *bag) 899 { 900 PetscErrorCode ierr; 901 size_t totalsize = bagsize+sizeof(struct _n_PetscBag)+sizeof(PetscScalar); 902 903 PetscFunctionBegin; 904 ierr = PetscInfo1(NULL,"Creating Bag with total size %d\n",(int)totalsize);CHKERRQ(ierr); 905 ierr = PetscMalloc(totalsize,bag);CHKERRQ(ierr); 906 ierr = PetscMemzero(*bag,bagsize+sizeof(struct _n_PetscBag)+sizeof(PetscScalar));CHKERRQ(ierr); 907 908 (*bag)->bagsize = bagsize+sizeof(struct _n_PetscBag)+sizeof(PetscScalar); 909 (*bag)->bagcomm = comm; 910 (*bag)->bagprefix = NULL; 911 (*bag)->structlocation = (void*)(((char*)(*bag)) + sizeof(PetscScalar)*(sizeof(struct _n_PetscBag)/sizeof(PetscScalar)) + sizeof(PetscScalar)); 912 PetscFunctionReturn(0); 913 } 914 915 /*@C 916 PetscBagSetName - Sets the name of a bag of values 917 918 Not Collective 919 920 Level: Intermediate 921 922 Input Parameters: 923 + bag - the bag of values 924 . name - the name assigned to the bag 925 - help - help message for bag 926 927 .seealso: PetscBag, PetscBagGetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 928 PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 929 PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum() 930 @*/ 931 932 PetscErrorCode PetscBagSetName(PetscBag bag, const char *name, const char *help) 933 { 934 PetscErrorCode ierr; 935 936 PetscFunctionBegin; 937 ierr = PetscStrncpy(bag->bagname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 938 ierr = PetscStrncpy(bag->baghelp,help,PETSC_BAG_HELP_LENGTH-1);CHKERRQ(ierr); 939 PetscFunctionReturn(0); 940 } 941 942 /*@C 943 PetscBagGetName - Gets the name of a bag of values 944 945 Not Collective 946 947 Level: Intermediate 948 949 Input Parameter: 950 . bag - the bag of values 951 952 Output Parameter: 953 . name - the name assigned to the bag 954 955 .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 956 PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 957 PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum() 958 @*/ 959 PetscErrorCode PetscBagGetName(PetscBag bag, char **name) 960 { 961 PetscFunctionBegin; 962 *name = bag->bagname; 963 PetscFunctionReturn(0); 964 } 965 966 /*@C 967 PetscBagGetData - Gives back the user - access to memory that 968 should be used for storing user-data-structure 969 970 Not Collective 971 972 Level: Intermediate 973 974 Input Parameter: 975 . bag - the bag of values 976 977 Output Parameter: 978 . data - pointer to memory that will have user-data-structure 979 980 .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad() 981 PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 982 PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum() 983 @*/ 984 PetscErrorCode PetscBagGetData(PetscBag bag, void **data) 985 { 986 PetscFunctionBegin; 987 *data = bag->structlocation; 988 PetscFunctionReturn(0); 989 } 990 991 /*@C 992 PetscBagSetOptionsPrefix - Sets the prefix used for searching for all 993 PetscBag items in the options database. 994 995 Logically collective on Bag. 996 997 Level: Intermediate 998 999 Input Parameters: 1000 + bag - the bag of values 1001 - prefix - the prefix to prepend all Bag item names with. 1002 1003 NOTES: Must be called prior to registering any of the bag items. 1004 1005 .seealso: PetscBag, PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 1006 PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum() 1007 @*/ 1008 1009 PetscErrorCode PetscBagSetOptionsPrefix(PetscBag bag, const char pre[]) 1010 { 1011 PetscErrorCode ierr; 1012 1013 PetscFunctionBegin; 1014 if (!pre) { 1015 ierr = PetscFree(bag->bagprefix);CHKERRQ(ierr); 1016 } else { 1017 if (pre[0] == '-') SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Options prefix should not begin with a hypen"); 1018 ierr = PetscFree(bag->bagprefix);CHKERRQ(ierr); 1019 ierr = PetscStrallocpy(pre,&(bag->bagprefix));CHKERRQ(ierr); 1020 } 1021 PetscFunctionReturn(0); 1022 } 1023 1024 /*@C 1025 PetscBagGetNames - Get the names of all entries in the bag 1026 1027 Not collective 1028 1029 Input Parameters: 1030 + bag - the bag of values 1031 - names - array of the correct size to hold names 1032 1033 Output Parameter: 1034 . names - array of char pointers for names 1035 1036 Level: intermediate 1037 1038 .seealso: PetscBag, PetscBagGetName(), PetscBagSetName(), PetscBagCreate(), PetscBagGetData() 1039 PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar(), PetscBagRegisterEnum() 1040 @*/ 1041 PetscErrorCode PetscBagGetNames(PetscBag bag, const char *names[]) 1042 { 1043 PetscBagItem nitem = bag->bagitems; 1044 PetscInt n; 1045 1046 PetscFunctionBegin; 1047 for (n = 0; nitem; ++n, nitem = nitem->next) {names[n] = nitem->name;} 1048 PetscFunctionReturn(0); 1049 } 1050