1 2 /* 3 Code that allows one to set the error handlers 4 */ 5 #include <petsc-private/petscimpl.h> /*I "petscsys.h" I*/ 6 7 typedef struct _EH *EH; 8 struct _EH { 9 PetscErrorCode (*handler)(MPI_Comm,int,const char*,const char*,const char*,PetscErrorCode,PetscErrorType,const char*,void*); 10 void *ctx; 11 EH previous; 12 }; 13 14 static EH eh = 0; 15 16 #undef __FUNCT__ 17 #define __FUNCT__ "PetscEmacsClientErrorHandler" 18 /*@C 19 PetscEmacsClientErrorHandler - Error handler that uses the emacsclient program to 20 load the file where the error occured. Then calls the "previous" error handler. 21 22 Not Collective 23 24 Input Parameters: 25 + comm - communicator over which error occured 26 . line - the line number of the error (indicated by __LINE__) 27 . func - the function where error is detected (indicated by __FUNCT__) 28 . file - the file in which the error was detected (indicated by __FILE__) 29 . dir - the directory of the file (indicated by __SDIR__) 30 . mess - an error text string, usually just printed to the screen 31 . n - the generic error number 32 . p - specific error number 33 - ctx - error handler context 34 35 Options Database Key: 36 . -on_error_emacs <machinename> 37 38 Level: developer 39 40 Notes: 41 You must put (server-start) in your .emacs file for the emacsclient software to work 42 43 Most users need not directly employ this routine and the other error 44 handlers, but can instead use the simplified interface SETERRQ, which has 45 the calling sequence 46 $ SETERRQ(PETSC_COMM_SELF,number,p,mess) 47 48 Notes for experienced users: 49 Use PetscPushErrorHandler() to set the desired error handler. 50 51 Developer Note: Since this is an error handler it cannot call CHKERRQ(); thus we just return if an error is detected. 52 53 Concepts: emacs^going to on error 54 Concepts: error handler^going to line in emacs 55 56 .seealso: PetscPushErrorHandler(), PetscAttachDebuggerErrorHandler(), 57 PetscAbortErrorHandler() 58 @*/ 59 PetscErrorCode PetscEmacsClientErrorHandler(MPI_Comm comm,int line,const char *fun,const char *file,const char *dir,PetscErrorCode n,PetscErrorType p,const char *mess,void *ctx) 60 { 61 PetscErrorCode ierr; 62 char command[PETSC_MAX_PATH_LEN]; 63 const char *pdir; 64 FILE *fp; 65 PetscInt rval; 66 67 PetscFunctionBegin; 68 ierr = PetscGetPetscDir(&pdir);if (ierr) PetscFunctionReturn(ierr); 69 sprintf(command,"cd %s; emacsclient --no-wait +%d %s%s\n",pdir,line,dir,file); 70 #if defined(PETSC_HAVE_POPEN) 71 ierr = PetscPOpen(MPI_COMM_WORLD,(char*)ctx,command,"r",&fp);if (ierr) PetscFunctionReturn(ierr); 72 ierr = PetscPClose(MPI_COMM_WORLD,fp,&rval);if (ierr) PetscFunctionReturn(ierr); 73 #else 74 SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP_SYS,"Cannot run external programs on this machine"); 75 #endif 76 ierr = PetscPopErrorHandler();if (ierr) PetscFunctionReturn(ierr); /* remove this handler from the stack of handlers */ 77 if (!eh) { 78 ierr = PetscTraceBackErrorHandler(comm,line,fun,file,dir,n,p,mess,0);if (ierr) PetscFunctionReturn(ierr); 79 } else { 80 ierr = (*eh->handler)(comm,line,fun,file,dir,n,p,mess,eh->ctx);if (ierr) PetscFunctionReturn(ierr); 81 } 82 PetscFunctionReturn(ierr); 83 } 84 85 #undef __FUNCT__ 86 #define __FUNCT__ "PetscPushErrorHandler" 87 /*@C 88 PetscPushErrorHandler - Sets a routine to be called on detection of errors. 89 90 Not Collective 91 92 Input Parameters: 93 + handler - error handler routine 94 - ctx - optional handler context that contains information needed by the handler (for 95 example file pointers for error messages etc.) 96 97 Calling sequence of handler: 98 $ int handler(MPI_Comm comm,int line,char *func,char *file,char *dir,PetscErrorCode n,int p,char *mess,void *ctx); 99 100 + comm - communicator over which error occured 101 . func - the function where the error occured (indicated by __FUNCT__) 102 . line - the line number of the error (indicated by __LINE__) 103 . file - the file in which the error was detected (indicated by __FILE__) 104 . dir - the directory of the file (indicated by __SDIR__) 105 . n - the generic error number (see list defined in include/petscerror.h) 106 . p - PETSC_ERROR_INITIAL if error just detected, otherwise PETSC_ERROR_REPEAT 107 . mess - an error text string, usually just printed to the screen 108 - ctx - the error handler context 109 110 Options Database Keys: 111 + -on_error_attach_debugger <noxterm,gdb or dbx> 112 - -on_error_abort 113 114 Level: intermediate 115 116 Notes: 117 The currently available PETSc error handlers include PetscTraceBackErrorHandler(), 118 PetscAttachDebuggerErrorHandler(), PetscAbortErrorHandler(), and PetscMPIAbortErrorHandler(), PetscReturnErrorHandler(). 119 120 Fortran Notes: You can only push one error handler from Fortran before poping it. 121 122 .seealso: PetscPopErrorHandler(), PetscAttachDebuggerErrorHandler(), PetscAbortErrorHandler(), PetscTraceBackErrorHandler(), PetscPushSignalHandler() 123 124 @*/ 125 PetscErrorCode PetscPushErrorHandler(PetscErrorCode (*handler)(MPI_Comm comm,int,const char*,const char*,const char*,PetscErrorCode,PetscErrorType,const char*,void*),void *ctx) 126 { 127 EH neweh; 128 PetscErrorCode ierr; 129 130 PetscFunctionBegin; 131 ierr = PetscNew(struct _EH,&neweh);CHKERRQ(ierr); 132 if (eh) neweh->previous = eh; 133 else neweh->previous = 0; 134 neweh->handler = handler; 135 neweh->ctx = ctx; 136 eh = neweh; 137 PetscFunctionReturn(0); 138 } 139 140 #undef __FUNCT__ 141 #define __FUNCT__ "PetscPopErrorHandler" 142 /*@ 143 PetscPopErrorHandler - Removes the latest error handler that was 144 pushed with PetscPushErrorHandler(). 145 146 Not Collective 147 148 Level: intermediate 149 150 Concepts: error handler^setting 151 152 .seealso: PetscPushErrorHandler() 153 @*/ 154 PetscErrorCode PetscPopErrorHandler(void) 155 { 156 EH tmp; 157 PetscErrorCode ierr; 158 159 PetscFunctionBegin; 160 if (!eh) PetscFunctionReturn(0); 161 tmp = eh; 162 eh = eh->previous; 163 ierr = PetscFree(tmp);CHKERRQ(ierr); 164 PetscFunctionReturn(0); 165 } 166 167 #undef __FUNCT__ 168 #define __FUNCT__ "PetscReturnErrorHandler" 169 /*@C 170 PetscReturnErrorHandler - Error handler that causes a return to the current 171 level. 172 173 Not Collective 174 175 Input Parameters: 176 + comm - communicator over which error occurred 177 . line - the line number of the error (indicated by __LINE__) 178 . func - the function where error is detected (indicated by __FUNCT__) 179 . file - the file in which the error was detected (indicated by __FILE__) 180 . dir - the directory of the file (indicated by __SDIR__) 181 . mess - an error text string, usually just printed to the screen 182 . n - the generic error number 183 . p - specific error number 184 - ctx - error handler context 185 186 Level: developer 187 188 Notes: 189 Most users need not directly employ this routine and the other error 190 handlers, but can instead use the simplified interface SETERRQ, which has 191 the calling sequence 192 $ SETERRQ(comm,number,mess) 193 194 Notes for experienced users: 195 This routine is good for catching errors such as zero pivots in preconditioners 196 or breakdown of iterative methods. It is not appropriate for memory violations 197 and similar errors. 198 199 Use PetscPushErrorHandler() to set the desired error handler. The 200 currently available PETSc error handlers include PetscTraceBackErrorHandler(), 201 PetscAttachDebuggerErrorHandler(), PetscAbortErrorHandler(), and PetscAbortErrorHandler() 202 203 Concepts: error handler 204 205 .seealso: PetscPushErrorHandler(), PetscPopErrorHandler(). 206 @*/ 207 208 PetscErrorCode PetscReturnErrorHandler(MPI_Comm comm,int line,const char *fun,const char *file,const char *dir,PetscErrorCode n,PetscErrorType p,const char *mess,void *ctx) 209 { 210 PetscFunctionBegin; 211 PetscFunctionReturn(n); 212 } 213 214 static char PetscErrorBaseMessage[1024]; 215 /* 216 The numerical values for these are defined in include/petscerror.h; any changes 217 there must also be made here 218 */ 219 static const char *PetscErrorStrings[] = { 220 /*55 */ "Out of memory", 221 "No support for this operation for this object type", 222 "No support for this operation on this system", 223 /*58 */ "Operation done in wrong order", 224 /*59 */ "Signal received", 225 /*60 */ "Nonconforming object sizes", 226 "Argument aliasing not permitted", 227 "Invalid argument", 228 /*63 */ "Argument out of range", 229 "Corrupt argument:\nsee http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind", 230 "Unable to open file", 231 "Read from file failed", 232 "Write to file failed", 233 "Invalid pointer", 234 /*69 */ "Arguments must have same type", 235 /*70 */ "Attempt to use a pointer that does not point to a valid accessible location", 236 /*71 */ "Detected zero pivot in LU factorization:\nsee http://www.mcs.anl.gov/petsc/documentation/faq.html#ZeroPivot", 237 /*72 */ "Floating point exception", 238 /*73 */ "Object is in wrong state", 239 "Corrupted Petsc object", 240 "Arguments are incompatible", 241 "Error in external library", 242 /*77 */ "Petsc has generated inconsistent data", 243 "Memory corruption", 244 "Unexpected data in file", 245 /*80 */ "Arguments must have same communicators", 246 /*81 */ "Detected zero pivot in Cholesky factorization:\nsee http://www.mcs.anl.gov/petsc/documentation/faq.html#ZeroPivot", 247 " ", 248 " ", 249 "Overflow in integer operation:\nsee http://www.mcs.anl.gov/petsc/documentation/faq.html#64-bit-indices", 250 /*85 */ "Null argument, when expecting valid pointer", 251 /*86 */ "Unknown type. Check for miss-spelling or missing external package needed for type:\nsee http://www.mcs.anl.gov/petsc/documentation/installation.html#external", 252 /*87 */ "Not used", 253 /*88 */ "Error in system call", 254 /*89 */ "Object Type not set:\nsee http://www.mcs.anl.gov/petsc/documentation/faq.html#objecttypenotset" 255 /*90 */ " ", 256 /* */ " ", 257 /* */ " ", 258 /* */ " ", 259 /* */ " ", 260 /*95 */ " ", 261 }; 262 263 #undef __FUNCT__ 264 #define __FUNCT__ "PetscErrorMessage" 265 /*@C 266 PetscErrorMessage - returns the text string associated with a PETSc error code. 267 268 Not Collective 269 270 Input Parameter: 271 . errnum - the error code 272 273 Output Parameter: 274 + text - the error message (NULL if not desired) 275 - specific - the specific error message that was set with SETERRxxx() or PetscError(). (NULL if not desired) 276 277 Level: developer 278 279 Concepts: error handler^messages 280 281 .seealso: PetscPushErrorHandler(), PetscAttachDebuggerErrorHandler(), 282 PetscAbortErrorHandler(), PetscTraceBackErrorHandler() 283 @*/ 284 PetscErrorCode PetscErrorMessage(int errnum,const char *text[],char **specific) 285 { 286 PetscFunctionBegin; 287 if (text && errnum > PETSC_ERR_MIN_VALUE && errnum < PETSC_ERR_MAX_VALUE) *text = PetscErrorStrings[errnum-PETSC_ERR_MIN_VALUE-1]; 288 else if (text) *text = 0; 289 290 if (specific) *specific = PetscErrorBaseMessage; 291 PetscFunctionReturn(0); 292 } 293 294 #undef __FUNCT__ 295 #define __FUNCT__ "PetscError" 296 /*@C 297 PetscError - Routine that is called when an error has been detected, 298 usually called through the macro SETERRQ(PETSC_COMM_SELF,). 299 300 Not Collective 301 302 Input Parameters: 303 + comm - communicator over which error occurred. ALL ranks of this communicator MUST call this routine 304 . line - the line number of the error (indicated by __LINE__) 305 . func - the function where the error occured (indicated by __FUNCT__) 306 . dir - the directory of file (indicated by __SDIR__) 307 . file - the file in which the error was detected (indicated by __FILE__) 308 . mess - an error text string, usually just printed to the screen 309 . n - the generic error number 310 . p - PETSC_ERROR_INITIAL indicates the error was initially detected, PETSC_ERROR_REPEAT indicates this is a traceback from a previously detected error 311 - mess - formatted message string - aka printf 312 313 Level: intermediate 314 315 Notes: 316 Most users need not directly use this routine and the error handlers, but 317 can instead use the simplified interface SETERRQ, which has the calling 318 sequence 319 $ SETERRQ(comm,n,mess) 320 321 Experienced users can set the error handler with PetscPushErrorHandler(). 322 323 Developer Note: Since this is called after an error condition it should not be calling any error handlers (currently it ignores any error codes) 324 BUT this routine does call regular PETSc functions that may call error handlers, this is problematic and could be fixed by never calling other PETSc routines 325 but this annoying. 326 327 Concepts: error^setting condition 328 329 .seealso: PetscTraceBackErrorHandler(), PetscPushErrorHandler(), SETERRQ(), CHKERRQ(), CHKMEMQ, SETERRQ1(), SETERRQ2() 330 @*/ 331 PetscErrorCode PetscError(MPI_Comm comm,int line,const char *func,const char *file,const char *dir,PetscErrorCode n,PetscErrorType p,const char *mess,...) 332 { 333 va_list Argp; 334 size_t fullLength; 335 char buf[2048],*lbuf = 0; 336 PetscBool ismain,isunknown; 337 PetscErrorCode ierr; 338 339 if (!func) func = "User provided function"; 340 if (!file) file = "User file"; 341 if (!dir) dir = " "; 342 343 PetscFunctionBegin; 344 /* Compose the message evaluating the print format */ 345 if (mess) { 346 va_start(Argp,mess); 347 PetscVSNPrintf(buf,2048,mess,&fullLength,Argp); 348 va_end(Argp); 349 lbuf = buf; 350 if (p == 1) PetscStrncpy(PetscErrorBaseMessage,lbuf,1023); 351 } 352 353 if (!eh) ierr = PetscTraceBackErrorHandler(comm,line,func,file,dir,n,p,lbuf,0); 354 else ierr = (*eh->handler)(comm,line,func,file,dir,n,p,lbuf,eh->ctx); 355 356 /* 357 If this is called from the main() routine we call MPI_Abort() instead of 358 return to allow the parallel program to be properly shutdown. 359 360 Since this is in the error handler we don't check the errors below. Of course, 361 PetscStrncmp() does its own error checking which is problamatic 362 */ 363 PetscStrncmp(func,"main",4,&ismain); 364 PetscStrncmp(func,"unknown",7,&isunknown); 365 if (ismain || isunknown) MPI_Abort(PETSC_COMM_WORLD,(int)ierr); 366 367 #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) 368 if (p == PETSC_ERROR_IN_CXX) { 369 const char *str; 370 if (eh && eh->ctx) { 371 std::ostringstream *msg; 372 msg = (std::ostringstream*) eh->ctx; 373 str = msg->str().c_str(); 374 } else str = "Error detected in C PETSc"; 375 376 throw PETSc::Exception(str); 377 } 378 #endif 379 PetscFunctionReturn(ierr); 380 } 381 382 /* -------------------------------------------------------------------------*/ 383 384 #undef __FUNCT__ 385 #define __FUNCT__ "PetscIntView" 386 /*@C 387 PetscIntView - Prints an array of integers; useful for debugging. 388 389 Collective on PetscViewer 390 391 Input Parameters: 392 + N - number of integers in array 393 . idx - array of integers 394 - viewer - location to print array, PETSC_VIEWER_STDOUT_WORLD, PETSC_VIEWER_STDOUT_SELF or 0 395 396 Level: intermediate 397 398 Developer Notes: idx cannot be const because may be passed to binary viewer where byte swappping is done 399 400 .seealso: PetscRealView() 401 @*/ 402 PetscErrorCode PetscIntView(PetscInt N,const PetscInt idx[],PetscViewer viewer) 403 { 404 PetscErrorCode ierr; 405 PetscInt j,i,n = N/20,p = N % 20; 406 PetscBool iascii,isbinary; 407 MPI_Comm comm; 408 409 PetscFunctionBegin; 410 if (!viewer) viewer = PETSC_VIEWER_STDOUT_SELF; 411 PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,3); 412 if (N) PetscValidIntPointer(idx,2); 413 ierr = PetscObjectGetComm((PetscObject)viewer,&comm);CHKERRQ(ierr); 414 415 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 416 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr); 417 if (iascii) { 418 ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_TRUE);CHKERRQ(ierr); 419 for (i=0; i<n; i++) { 420 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"%D:",20*i);CHKERRQ(ierr); 421 for (j=0; j<20; j++) { 422 ierr = PetscViewerASCIISynchronizedPrintf(viewer," %D",idx[i*20+j]);CHKERRQ(ierr); 423 } 424 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr); 425 } 426 if (p) { 427 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"%D:",20*n);CHKERRQ(ierr); 428 for (i=0; i<p; i++) { ierr = PetscViewerASCIISynchronizedPrintf(viewer," %D",idx[20*n+i]);CHKERRQ(ierr);} 429 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr); 430 } 431 ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 432 ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_FALSE);CHKERRQ(ierr); 433 } else if (isbinary) { 434 PetscMPIInt rank,size,*sizes,Ntotal,*displs,NN; 435 PetscInt *array; 436 437 ierr = PetscMPIIntCast(N,&NN);CHKERRQ(ierr); 438 ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 439 ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr); 440 441 if (size > 1) { 442 if (rank) { 443 ierr = MPI_Gather(&NN,1,MPI_INT,0,0,MPI_INT,0,comm);CHKERRQ(ierr); 444 ierr = MPI_Gatherv((void*)idx,NN,MPIU_INT,0,0,0,MPIU_INT,0,comm);CHKERRQ(ierr); 445 } else { 446 ierr = PetscMalloc(size*sizeof(PetscMPIInt),&sizes);CHKERRQ(ierr); 447 ierr = MPI_Gather(&NN,1,MPI_INT,sizes,1,MPI_INT,0,comm);CHKERRQ(ierr); 448 Ntotal = sizes[0]; 449 ierr = PetscMalloc(size*sizeof(PetscMPIInt),&displs);CHKERRQ(ierr); 450 displs[0] = 0; 451 for (i=1; i<size; i++) { 452 Ntotal += sizes[i]; 453 displs[i] = displs[i-1] + sizes[i-1]; 454 } 455 ierr = PetscMalloc(Ntotal*sizeof(PetscInt),&array);CHKERRQ(ierr); 456 ierr = MPI_Gatherv((void*)idx,NN,MPIU_INT,array,sizes,displs,MPIU_INT,0,comm);CHKERRQ(ierr); 457 ierr = PetscViewerBinaryWrite(viewer,array,Ntotal,PETSC_INT,PETSC_TRUE);CHKERRQ(ierr); 458 ierr = PetscFree(sizes);CHKERRQ(ierr); 459 ierr = PetscFree(displs);CHKERRQ(ierr); 460 ierr = PetscFree(array);CHKERRQ(ierr); 461 } 462 } else { 463 ierr = PetscViewerBinaryWrite(viewer,(void*) idx,N,PETSC_INT,PETSC_FALSE);CHKERRQ(ierr); 464 } 465 } else { 466 const char *tname; 467 ierr = PetscObjectGetName((PetscObject)viewer,&tname);CHKERRQ(ierr); 468 SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot handle that PetscViewer of type %s",tname); 469 } 470 PetscFunctionReturn(0); 471 } 472 473 #undef __FUNCT__ 474 #define __FUNCT__ "PetscRealView" 475 /*@C 476 PetscRealView - Prints an array of doubles; useful for debugging. 477 478 Collective on PetscViewer 479 480 Input Parameters: 481 + N - number of doubles in array 482 . idx - array of doubles 483 - viewer - location to print array, PETSC_VIEWER_STDOUT_WORLD, PETSC_VIEWER_STDOUT_SELF or 0 484 485 Level: intermediate 486 487 Developer Notes: idx cannot be const because may be passed to binary viewer where byte swappping is done 488 489 .seealso: PetscIntView() 490 @*/ 491 PetscErrorCode PetscRealView(PetscInt N,const PetscReal idx[],PetscViewer viewer) 492 { 493 PetscErrorCode ierr; 494 PetscInt j,i,n = N/5,p = N % 5; 495 PetscBool iascii,isbinary; 496 MPI_Comm comm; 497 498 PetscFunctionBegin; 499 if (!viewer) viewer = PETSC_VIEWER_STDOUT_SELF; 500 PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,3); 501 PetscValidScalarPointer(idx,2); 502 ierr = PetscObjectGetComm((PetscObject)viewer,&comm);CHKERRQ(ierr); 503 504 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 505 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr); 506 if (iascii) { 507 ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_TRUE);CHKERRQ(ierr); 508 for (i=0; i<n; i++) { 509 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"%2d:",5*i);CHKERRQ(ierr); 510 for (j=0; j<5; j++) { 511 ierr = PetscViewerASCIISynchronizedPrintf(viewer," %12.4e",idx[i*5+j]);CHKERRQ(ierr); 512 } 513 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr); 514 } 515 if (p) { 516 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"%2d:",5*n);CHKERRQ(ierr); 517 for (i=0; i<p; i++) { PetscViewerASCIISynchronizedPrintf(viewer," %12.4e",idx[5*n+i]);CHKERRQ(ierr);} 518 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr); 519 } 520 ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 521 ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_FALSE);CHKERRQ(ierr); 522 } else if (isbinary) { 523 PetscMPIInt rank,size,*sizes,*displs, Ntotal,NN; 524 PetscReal *array; 525 526 ierr = PetscMPIIntCast(N,&NN);CHKERRQ(ierr); 527 ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 528 ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr); 529 530 if (size > 1) { 531 if (rank) { 532 ierr = MPI_Gather(&NN,1,MPI_INT,0,0,MPI_INT,0,comm);CHKERRQ(ierr); 533 ierr = MPI_Gatherv((PetscReal*)idx,NN,MPIU_REAL,0,0,0,MPIU_REAL,0,comm);CHKERRQ(ierr); 534 } else { 535 ierr = PetscMalloc(size*sizeof(PetscMPIInt),&sizes);CHKERRQ(ierr); 536 ierr = MPI_Gather(&NN,1,MPI_INT,sizes,1,MPI_INT,0,comm);CHKERRQ(ierr); 537 Ntotal = sizes[0]; 538 ierr = PetscMalloc(size*sizeof(PetscMPIInt),&displs);CHKERRQ(ierr); 539 displs[0] = 0; 540 for (i=1; i<size; i++) { 541 Ntotal += sizes[i]; 542 displs[i] = displs[i-1] + sizes[i-1]; 543 } 544 ierr = PetscMalloc(Ntotal*sizeof(PetscReal),&array);CHKERRQ(ierr); 545 ierr = MPI_Gatherv((PetscReal*)idx,NN,MPIU_REAL,array,sizes,displs,MPIU_REAL,0,comm);CHKERRQ(ierr); 546 ierr = PetscViewerBinaryWrite(viewer,array,Ntotal,PETSC_REAL,PETSC_TRUE);CHKERRQ(ierr); 547 ierr = PetscFree(sizes);CHKERRQ(ierr); 548 ierr = PetscFree(displs);CHKERRQ(ierr); 549 ierr = PetscFree(array);CHKERRQ(ierr); 550 } 551 } else { 552 ierr = PetscViewerBinaryWrite(viewer,(void*) idx,N,PETSC_REAL,PETSC_FALSE);CHKERRQ(ierr); 553 } 554 } else { 555 const char *tname; 556 ierr = PetscObjectGetName((PetscObject)viewer,&tname);CHKERRQ(ierr); 557 SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot handle that PetscViewer of type %s",tname); 558 } 559 PetscFunctionReturn(0); 560 } 561 562 #undef __FUNCT__ 563 #define __FUNCT__ "PetscScalarView" 564 /*@C 565 PetscScalarView - Prints an array of scalars; useful for debugging. 566 567 Collective on PetscViewer 568 569 Input Parameters: 570 + N - number of scalars in array 571 . idx - array of scalars 572 - viewer - location to print array, PETSC_VIEWER_STDOUT_WORLD, PETSC_VIEWER_STDOUT_SELF or 0 573 574 Level: intermediate 575 576 Developer Notes: idx cannot be const because may be passed to binary viewer where byte swappping is done 577 578 .seealso: PetscIntView(), PetscRealView() 579 @*/ 580 PetscErrorCode PetscScalarView(PetscInt N,const PetscScalar idx[],PetscViewer viewer) 581 { 582 PetscErrorCode ierr; 583 PetscInt j,i,n = N/3,p = N % 3; 584 PetscBool iascii,isbinary; 585 MPI_Comm comm; 586 587 PetscFunctionBegin; 588 if (!viewer) viewer = PETSC_VIEWER_STDOUT_SELF; 589 PetscValidHeader(viewer,3); 590 PetscValidScalarPointer(idx,2); 591 ierr = PetscObjectGetComm((PetscObject)viewer,&comm);CHKERRQ(ierr); 592 593 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 594 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr); 595 if (iascii) { 596 ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_TRUE);CHKERRQ(ierr); 597 for (i=0; i<n; i++) { 598 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"%2d:",3*i);CHKERRQ(ierr); 599 for (j=0; j<3; j++) { 600 #if defined(PETSC_USE_COMPLEX) 601 ierr = PetscViewerASCIISynchronizedPrintf(viewer," (%12.4e,%12.4e)", PetscRealPart(idx[i*3+j]),PetscImaginaryPart(idx[i*3+j]));CHKERRQ(ierr); 602 #else 603 ierr = PetscViewerASCIISynchronizedPrintf(viewer," %12.4e",idx[i*3+j]);CHKERRQ(ierr); 604 #endif 605 } 606 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr); 607 } 608 if (p) { 609 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"%2d:",3*n);CHKERRQ(ierr); 610 for (i=0; i<p; i++) { 611 #if defined(PETSC_USE_COMPLEX) 612 ierr = PetscViewerASCIISynchronizedPrintf(viewer," (%12.4e,%12.4e)", PetscRealPart(idx[n*3+i]),PetscImaginaryPart(idx[n*3+i]));CHKERRQ(ierr); 613 #else 614 ierr = PetscViewerASCIISynchronizedPrintf(viewer," %12.4e",idx[3*n+i]);CHKERRQ(ierr); 615 #endif 616 } 617 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr); 618 } 619 ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 620 ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_FALSE);CHKERRQ(ierr); 621 } else if (isbinary) { 622 PetscMPIInt size,rank,*sizes,Ntotal,*displs,NN; 623 PetscScalar *array; 624 625 ierr = PetscMPIIntCast(N,&NN);CHKERRQ(ierr); 626 ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 627 ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr); 628 629 if (size > 1) { 630 if (rank) { 631 ierr = MPI_Gather(&NN,1,MPI_INT,0,0,MPI_INT,0,comm);CHKERRQ(ierr); 632 ierr = MPI_Gatherv((void*)idx,NN,MPIU_SCALAR,0,0,0,MPIU_SCALAR,0,comm);CHKERRQ(ierr); 633 } else { 634 ierr = PetscMalloc(size*sizeof(PetscMPIInt),&sizes);CHKERRQ(ierr); 635 ierr = MPI_Gather(&NN,1,MPI_INT,sizes,1,MPI_INT,0,comm);CHKERRQ(ierr); 636 Ntotal = sizes[0]; 637 ierr = PetscMalloc(size*sizeof(PetscMPIInt),&displs);CHKERRQ(ierr); 638 displs[0] = 0; 639 for (i=1; i<size; i++) { 640 Ntotal += sizes[i]; 641 displs[i] = displs[i-1] + sizes[i-1]; 642 } 643 ierr = PetscMalloc(Ntotal*sizeof(PetscScalar),&array);CHKERRQ(ierr); 644 ierr = MPI_Gatherv((void*)idx,NN,MPIU_SCALAR,array,sizes,displs,MPIU_SCALAR,0,comm);CHKERRQ(ierr); 645 ierr = PetscViewerBinaryWrite(viewer,array,Ntotal,PETSC_SCALAR,PETSC_TRUE);CHKERRQ(ierr); 646 ierr = PetscFree(sizes);CHKERRQ(ierr); 647 ierr = PetscFree(displs);CHKERRQ(ierr); 648 ierr = PetscFree(array);CHKERRQ(ierr); 649 } 650 } else { 651 ierr = PetscViewerBinaryWrite(viewer,(void*) idx,N,PETSC_SCALAR,PETSC_FALSE);CHKERRQ(ierr); 652 } 653 } else { 654 const char *tname; 655 ierr = PetscObjectGetName((PetscObject)viewer,&tname);CHKERRQ(ierr); 656 SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot handle that PetscViewer of type %s",tname); 657 } 658 PetscFunctionReturn(0); 659 } 660 661 662 663 664