1 2 /* 3 Code that allows one to set the error handlers 4 */ 5 #include <petsc/private/petscimpl.h> /*I "petscsys.h" I*/ 6 #include <petscviewer.h> 7 8 /* A table of Petsc source files containing calls to PETSCABORT. We assume this table will 9 stay stable for a while. When things changed, we just need to add new files to the table. 10 */ 11 static const char* PetscAbortSourceFiles[] = { 12 "NotFound", /* 0, not found in petsc, but may be in users' code if they called PETSCABORT. */ 13 "sys/error/adebug.c", 14 "sys/error/err.c", 15 "src/sys/error/errstop.c", 16 "sys/error/fp.c", 17 "sys/error/signal.c", /* 5 */ 18 "sys/ftn-custom/zutils.c", 19 "sys/logging/utils/stagelog.c", 20 "sys/mpiuni/mpitime.c", 21 "sys/objects/init.c", 22 "sys/objects/pinit.c", /* 10 */ 23 "vec/vec/interface/dlregisvec.c", 24 "vec/vec/utils/comb.c" 25 }; 26 27 /* Find index of the soure file where a PETSCABORT was called. */ 28 PetscErrorCode PetscAbortFindSourceFile_Private(const char* filepath, PetscInt *idx) 29 { 30 PetscErrorCode ierr; 31 PetscInt i,n = sizeof(PetscAbortSourceFiles)/sizeof(PetscAbortSourceFiles[0]); 32 PetscBool match; 33 char subpath[256]; 34 35 PetscFunctionBegin; 36 PetscValidIntPointer(idx,2); 37 *idx = 0; 38 for (i=1; i<n; i++) { 39 ierr = PetscFixFilename(PetscAbortSourceFiles[i],subpath);CHKERRQ(ierr); 40 ierr = PetscStrendswith(filepath,subpath,&match);CHKERRQ(ierr); 41 if (match) {*idx = i; break;} 42 } 43 PetscFunctionReturn(0); 44 } 45 46 typedef struct _EH *EH; 47 struct _EH { 48 PetscErrorCode (*handler)(MPI_Comm,int,const char*,const char*,PetscErrorCode,PetscErrorType,const char*,void*); 49 void *ctx; 50 EH previous; 51 }; 52 53 static EH eh = 0; 54 55 /*@C 56 PetscEmacsClientErrorHandler - Error handler that uses the emacsclient program to 57 load the file where the error occured. Then calls the "previous" error handler. 58 59 Not Collective 60 61 Input Parameters: 62 + comm - communicator over which error occured 63 . line - the line number of the error (indicated by __LINE__) 64 . file - the file in which the error was detected (indicated by __FILE__) 65 . mess - an error text string, usually just printed to the screen 66 . n - the generic error number 67 . p - specific error number 68 - ctx - error handler context 69 70 Options Database Key: 71 . -on_error_emacs <machinename> 72 73 Level: developer 74 75 Notes: 76 You must put (server-start) in your .emacs file for the emacsclient software to work 77 78 Most users need not directly employ this routine and the other error 79 handlers, but can instead use the simplified interface SETERRQ, which has 80 the calling sequence 81 $ SETERRQ(PETSC_COMM_SELF,number,p,mess) 82 83 Notes for experienced users: 84 Use PetscPushErrorHandler() to set the desired error handler. 85 86 Developer Note: 87 Since this is an error handler it cannot call CHKERRQ(); thus we just return if an error is detected. 88 89 90 .seealso: PetscPushErrorHandler(), PetscAttachDebuggerErrorHandler(), 91 PetscAbortErrorHandler() 92 @*/ 93 PetscErrorCode PetscEmacsClientErrorHandler(MPI_Comm comm,int line,const char *fun,const char *file,PetscErrorCode n,PetscErrorType p,const char *mess,void *ctx) 94 { 95 PetscErrorCode ierr; 96 char command[PETSC_MAX_PATH_LEN]; 97 const char *pdir; 98 FILE *fp; 99 100 PetscFunctionBegin; 101 ierr = PetscGetPetscDir(&pdir);if (ierr) PetscFunctionReturn(ierr); 102 sprintf(command,"cd %s; emacsclient --no-wait +%d %s\n",pdir,line,file); 103 #if defined(PETSC_HAVE_POPEN) 104 ierr = PetscPOpen(MPI_COMM_WORLD,(char*)ctx,command,"r",&fp);if (ierr) PetscFunctionReturn(ierr); 105 ierr = PetscPClose(MPI_COMM_WORLD,fp);if (ierr) PetscFunctionReturn(ierr); 106 #else 107 SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP_SYS,"Cannot run external programs on this machine"); 108 #endif 109 ierr = PetscPopErrorHandler();if (ierr) PetscFunctionReturn(ierr); /* remove this handler from the stack of handlers */ 110 if (!eh) { 111 ierr = PetscTraceBackErrorHandler(comm,line,fun,file,n,p,mess,0);if (ierr) PetscFunctionReturn(ierr); 112 } else { 113 ierr = (*eh->handler)(comm,line,fun,file,n,p,mess,eh->ctx);if (ierr) PetscFunctionReturn(ierr); 114 } 115 PetscFunctionReturn(ierr); 116 } 117 118 /*@C 119 PetscPushErrorHandler - Sets a routine to be called on detection of errors. 120 121 Not Collective 122 123 Input Parameters: 124 + handler - error handler routine 125 - ctx - optional handler context that contains information needed by the handler (for 126 example file pointers for error messages etc.) 127 128 Calling sequence of handler: 129 $ int handler(MPI_Comm comm,int line,char *func,char *file,PetscErrorCode n,int p,char *mess,void *ctx); 130 131 + comm - communicator over which error occured 132 . line - the line number of the error (indicated by __LINE__) 133 . file - the file in which the error was detected (indicated by __FILE__) 134 . n - the generic error number (see list defined in include/petscerror.h) 135 . p - PETSC_ERROR_INITIAL if error just detected, otherwise PETSC_ERROR_REPEAT 136 . mess - an error text string, usually just printed to the screen 137 - ctx - the error handler context 138 139 Options Database Keys: 140 + -on_error_attach_debugger <noxterm,gdb or dbx> 141 - -on_error_abort 142 143 Level: intermediate 144 145 Notes: 146 The currently available PETSc error handlers include PetscTraceBackErrorHandler(), 147 PetscAttachDebuggerErrorHandler(), PetscAbortErrorHandler(), and PetscMPIAbortErrorHandler(), PetscReturnErrorHandler(). 148 149 Fortran Notes: 150 You can only push one error handler from Fortran before poping it. 151 152 .seealso: PetscPopErrorHandler(), PetscAttachDebuggerErrorHandler(), PetscAbortErrorHandler(), PetscTraceBackErrorHandler(), PetscPushSignalHandler() 153 154 @*/ 155 PetscErrorCode PetscPushErrorHandler(PetscErrorCode (*handler)(MPI_Comm comm,int,const char*,const char*,PetscErrorCode,PetscErrorType,const char*,void*),void *ctx) 156 { 157 EH neweh; 158 PetscErrorCode ierr; 159 160 PetscFunctionBegin; 161 ierr = PetscNew(&neweh);CHKERRQ(ierr); 162 if (eh) neweh->previous = eh; 163 else neweh->previous = 0; 164 neweh->handler = handler; 165 neweh->ctx = ctx; 166 eh = neweh; 167 PetscFunctionReturn(0); 168 } 169 170 /*@ 171 PetscPopErrorHandler - Removes the latest error handler that was 172 pushed with PetscPushErrorHandler(). 173 174 Not Collective 175 176 Level: intermediate 177 178 .seealso: PetscPushErrorHandler() 179 @*/ 180 PetscErrorCode PetscPopErrorHandler(void) 181 { 182 EH tmp; 183 PetscErrorCode ierr; 184 185 PetscFunctionBegin; 186 if (!eh) PetscFunctionReturn(0); 187 tmp = eh; 188 eh = eh->previous; 189 ierr = PetscFree(tmp);CHKERRQ(ierr); 190 PetscFunctionReturn(0); 191 } 192 193 /*@C 194 PetscReturnErrorHandler - Error handler that causes a return to the current 195 level. 196 197 Not Collective 198 199 Input Parameters: 200 + comm - communicator over which error occurred 201 . line - the line number of the error (indicated by __LINE__) 202 . file - the file in which the error was detected (indicated by __FILE__) 203 . mess - an error text string, usually just printed to the screen 204 . n - the generic error number 205 . p - specific error number 206 - ctx - error handler context 207 208 Level: developer 209 210 Notes: 211 Most users need not directly employ this routine and the other error 212 handlers, but can instead use the simplified interface SETERRQ, which has 213 the calling sequence 214 $ SETERRQ(comm,number,mess) 215 216 Notes for experienced users: 217 This routine is good for catching errors such as zero pivots in preconditioners 218 or breakdown of iterative methods. It is not appropriate for memory violations 219 and similar errors. 220 221 Use PetscPushErrorHandler() to set the desired error handler. The 222 currently available PETSc error handlers include PetscTraceBackErrorHandler(), 223 PetscAttachDebuggerErrorHandler(), PetscAbortErrorHandler(), and PetscAbortErrorHandler() 224 225 .seealso: PetscPushErrorHandler(), PetscPopErrorHandler(). 226 @*/ 227 228 PetscErrorCode PetscReturnErrorHandler(MPI_Comm comm,int line,const char *fun,const char *file,PetscErrorCode n,PetscErrorType p,const char *mess,void *ctx) 229 { 230 PetscFunctionBegin; 231 PetscFunctionReturn(n); 232 } 233 234 static char PetscErrorBaseMessage[1024]; 235 /* 236 The numerical values for these are defined in include/petscerror.h; any changes 237 there must also be made here 238 */ 239 static const char *PetscErrorStrings[] = { 240 /*55 */ "Out of memory", 241 "No support for this operation for this object type", 242 "No support for this operation on this system", 243 /*58 */ "Operation done in wrong order", 244 /*59 */ "Signal received", 245 /*60 */ "Nonconforming object sizes", 246 "Argument aliasing not permitted", 247 "Invalid argument", 248 /*63 */ "Argument out of range", 249 "Corrupt argument: https://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind", 250 "Unable to open file", 251 "Read from file failed", 252 "Write to file failed", 253 "Invalid pointer", 254 /*69 */ "Arguments must have same type", 255 /*70 */ "Attempt to use a pointer that does not point to a valid accessible location", 256 /*71 */ "Zero pivot in LU factorization: https://www.mcs.anl.gov/petsc/documentation/faq.html#zeropivot", 257 /*72 */ "Floating point exception", 258 /*73 */ "Object is in wrong state", 259 "Corrupted Petsc object", 260 "Arguments are incompatible", 261 "Error in external library", 262 /*77 */ "Petsc has generated inconsistent data", 263 "Memory corruption: https://www.mcs.anl.gov/petsc/documentation/installation.html#valgrind", 264 "Unexpected data in file", 265 /*80 */ "Arguments must have same communicators", 266 /*81 */ "Zero pivot in Cholesky factorization: https://www.mcs.anl.gov/petsc/documentation/faq.html#zeropivot", 267 " ", 268 " ", 269 "Overflow in integer operation: https://www.mcs.anl.gov/petsc/documentation/faq.html#64-bit-indices", 270 /*85 */ "Null argument, when expecting valid pointer", 271 /*86 */ "Unknown type. Check for miss-spelling or missing package: https://www.mcs.anl.gov/petsc/documentation/installation.html#external", 272 /*87 */ "MPI library at runtime is not compatible with MPI used at compile time", 273 /*88 */ "Error in system call", 274 /*89 */ "Object Type not set: https://www.mcs.anl.gov/petsc/documentation/faq.html#objecttypenotset", 275 /*90 */ " ", 276 /* */ " ", 277 /*92 */ "See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers", 278 /*93 */ "You cannot overwrite this option since that will conflict with other previously set options", 279 /*94 */ "Example/application run with number of MPI ranks it does not support", 280 /*95 */ "Missing or incorrect user input ", 281 }; 282 283 /*@C 284 PetscErrorMessage - returns the text string associated with a PETSc error code. 285 286 Not Collective 287 288 Input Parameter: 289 . errnum - the error code 290 291 Output Parameter: 292 + text - the error message (NULL if not desired) 293 - specific - the specific error message that was set with SETERRxxx() or PetscError(). (NULL if not desired) 294 295 Level: developer 296 297 .seealso: PetscPushErrorHandler(), PetscAttachDebuggerErrorHandler(), PetscError(), SETERRQ(), CHKERRQ() 298 PetscAbortErrorHandler(), PetscTraceBackErrorHandler() 299 @*/ 300 PetscErrorCode PetscErrorMessage(int errnum,const char *text[],char **specific) 301 { 302 PetscFunctionBegin; 303 if (text && errnum > PETSC_ERR_MIN_VALUE && errnum < PETSC_ERR_MAX_VALUE) *text = PetscErrorStrings[errnum-PETSC_ERR_MIN_VALUE-1]; 304 else if (text) *text = 0; 305 306 if (specific) *specific = PetscErrorBaseMessage; 307 PetscFunctionReturn(0); 308 } 309 310 #if defined(PETSC_CLANGUAGE_CXX) 311 /* C++ exceptions are formally not allowed to propagate through extern "C" code. In practice, far too much software 312 * would be broken if implementations did not handle it it some common cases. However, keep in mind 313 * 314 * Rule 62. Don't allow exceptions to propagate across module boundaries 315 * 316 * in "C++ Coding Standards" by Sutter and Alexandrescu. (This accounts for part of the ongoing C++ binary interface 317 * instability.) Having PETSc raise errors as C++ exceptions was probably misguided and should eventually be removed. 318 * 319 * Here is the problem: You have a C++ function call a PETSc function, and you would like to maintain the error message 320 * and stack information from the PETSc error. You could make everyone write exactly this code in their C++, but that 321 * seems crazy to me. 322 */ 323 #include <sstream> 324 #include <stdexcept> 325 static void PetscCxxErrorThrow() { 326 const char *str; 327 if (eh && eh->ctx) { 328 std::ostringstream *msg; 329 msg = (std::ostringstream*) eh->ctx; 330 str = msg->str().c_str(); 331 } else str = "Error detected in C PETSc"; 332 333 throw std::runtime_error(str); 334 } 335 #endif 336 337 /*@C 338 PetscError - Routine that is called when an error has been detected, 339 usually called through the macro SETERRQ(PETSC_COMM_SELF,). 340 341 Not Collective 342 343 Input Parameters: 344 + comm - communicator over which error occurred. ALL ranks of this communicator MUST call this routine 345 . line - the line number of the error (indicated by __LINE__) 346 . func - the function name in which the error was detected 347 . file - the file in which the error was detected (indicated by __FILE__) 348 . n - the generic error number 349 . p - PETSC_ERROR_INITIAL indicates the error was initially detected, PETSC_ERROR_REPEAT indicates this is a traceback from a previously detected error 350 - mess - formatted message string - aka printf 351 352 Level: intermediate 353 354 Notes: 355 Most users need not directly use this routine and the error handlers, but 356 can instead use the simplified interface SETERRQ, which has the calling 357 sequence 358 $ SETERRQ(comm,n,mess) 359 360 Fortran Note: 361 This routine is used differently from Fortran 362 $ PetscError(MPI_Comm comm,PetscErrorCode n,PetscErrorType p,char *message) 363 364 Experienced users can set the error handler with PetscPushErrorHandler(). 365 366 Developer Note: Since this is called after an error condition it should not be calling any error handlers (currently it ignores any error codes) 367 BUT this routine does call regular PETSc functions that may call error handlers, this is problematic and could be fixed by never calling other PETSc routines 368 but this annoying. 369 370 .seealso: PetscTraceBackErrorHandler(), PetscPushErrorHandler(), SETERRQ(), CHKERRQ(), CHKMEMQ, SETERRQ1(), SETERRQ2(), PetscErrorMessage() 371 @*/ 372 PetscErrorCode PetscError(MPI_Comm comm,int line,const char *func,const char *file,PetscErrorCode n,PetscErrorType p,const char *mess,...) 373 { 374 va_list Argp; 375 size_t fullLength; 376 char buf[2048],*lbuf = 0; 377 PetscBool ismain; 378 PetscErrorCode ierr; 379 380 PetscFunctionBegin; 381 if (!func) func = "User provided function"; 382 if (!file) file = "User file"; 383 if (comm == MPI_COMM_NULL) comm = PETSC_COMM_SELF; 384 385 /* Compose the message evaluating the print format */ 386 if (mess) { 387 va_start(Argp,mess); 388 PetscVSNPrintf(buf,2048,mess,&fullLength,Argp); 389 va_end(Argp); 390 lbuf = buf; 391 if (p == PETSC_ERROR_INITIAL) PetscStrncpy(PetscErrorBaseMessage,lbuf,1023); 392 } 393 394 if (!eh) ierr = PetscTraceBackErrorHandler(comm,line,func,file,n,p,lbuf,0); 395 else ierr = (*eh->handler)(comm,line,func,file,n,p,lbuf,eh->ctx); 396 397 /* 398 If this is called from the main() routine we call PETSCABORT instead of 399 return to allow the parallel program to be properly shutdown. 400 401 Since this is in the error handler we don't check the errors below. Of course, 402 PetscStrncmp() does its own error checking which is problamatic 403 */ 404 PetscStrncmp(func,"main",4,&ismain); 405 if (ismain) PETSCABORT(PETSC_COMM_WORLD,(int)ierr); 406 407 #if defined(PETSC_CLANGUAGE_CXX) 408 if (p == PETSC_ERROR_IN_CXX) { 409 PetscCxxErrorThrow(); 410 } 411 #endif 412 PetscFunctionReturn(ierr); 413 } 414 415 /* -------------------------------------------------------------------------*/ 416 417 /*@C 418 PetscIntView - Prints an array of integers; useful for debugging. 419 420 Collective on PetscViewer 421 422 Input Parameters: 423 + N - number of integers in array 424 . idx - array of integers 425 - viewer - location to print array, PETSC_VIEWER_STDOUT_WORLD, PETSC_VIEWER_STDOUT_SELF or 0 426 427 Level: intermediate 428 429 Developer Notes: 430 idx cannot be const because may be passed to binary viewer where byte swapping is done 431 432 .seealso: PetscRealView() 433 @*/ 434 PetscErrorCode PetscIntView(PetscInt N,const PetscInt idx[],PetscViewer viewer) 435 { 436 PetscErrorCode ierr; 437 PetscMPIInt rank,size; 438 PetscInt j,i,n = N/20,p = N % 20; 439 PetscBool iascii,isbinary; 440 MPI_Comm comm; 441 442 PetscFunctionBegin; 443 if (!viewer) viewer = PETSC_VIEWER_STDOUT_SELF; 444 PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,3); 445 if (N) PetscValidIntPointer(idx,2); 446 ierr = PetscObjectGetComm((PetscObject)viewer,&comm);CHKERRQ(ierr); 447 ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr); 448 ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 449 450 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 451 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr); 452 if (iascii) { 453 ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr); 454 for (i=0; i<n; i++) { 455 if (size > 1) { 456 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] %D:", rank, 20*i);CHKERRQ(ierr); 457 } else { 458 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"%D:",20*i);CHKERRQ(ierr); 459 } 460 for (j=0; j<20; j++) { 461 ierr = PetscViewerASCIISynchronizedPrintf(viewer," %D",idx[i*20+j]);CHKERRQ(ierr); 462 } 463 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr); 464 } 465 if (p) { 466 if (size > 1) { 467 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] %D:",rank ,20*n);CHKERRQ(ierr); 468 } else { 469 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"%D:",20*n);CHKERRQ(ierr); 470 } 471 for (i=0; i<p; i++) { ierr = PetscViewerASCIISynchronizedPrintf(viewer," %D",idx[20*n+i]);CHKERRQ(ierr);} 472 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr); 473 } 474 ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 475 ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr); 476 } else if (isbinary) { 477 PetscMPIInt *sizes,Ntotal,*displs,NN; 478 PetscInt *array; 479 480 ierr = PetscMPIIntCast(N,&NN);CHKERRQ(ierr); 481 482 if (size > 1) { 483 if (rank) { 484 ierr = MPI_Gather(&NN,1,MPI_INT,0,0,MPI_INT,0,comm);CHKERRQ(ierr); 485 ierr = MPI_Gatherv((void*)idx,NN,MPIU_INT,0,0,0,MPIU_INT,0,comm);CHKERRQ(ierr); 486 } else { 487 ierr = PetscMalloc1(size,&sizes);CHKERRQ(ierr); 488 ierr = MPI_Gather(&NN,1,MPI_INT,sizes,1,MPI_INT,0,comm);CHKERRQ(ierr); 489 Ntotal = sizes[0]; 490 ierr = PetscMalloc1(size,&displs);CHKERRQ(ierr); 491 displs[0] = 0; 492 for (i=1; i<size; i++) { 493 Ntotal += sizes[i]; 494 displs[i] = displs[i-1] + sizes[i-1]; 495 } 496 ierr = PetscMalloc1(Ntotal,&array);CHKERRQ(ierr); 497 ierr = MPI_Gatherv((void*)idx,NN,MPIU_INT,array,sizes,displs,MPIU_INT,0,comm);CHKERRQ(ierr); 498 ierr = PetscViewerBinaryWrite(viewer,array,Ntotal,PETSC_INT,PETSC_TRUE);CHKERRQ(ierr); 499 ierr = PetscFree(sizes);CHKERRQ(ierr); 500 ierr = PetscFree(displs);CHKERRQ(ierr); 501 ierr = PetscFree(array);CHKERRQ(ierr); 502 } 503 } else { 504 ierr = PetscViewerBinaryWrite(viewer,(void*) idx,N,PETSC_INT,PETSC_FALSE);CHKERRQ(ierr); 505 } 506 } else { 507 const char *tname; 508 ierr = PetscObjectGetName((PetscObject)viewer,&tname);CHKERRQ(ierr); 509 SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot handle that PetscViewer of type %s",tname); 510 } 511 PetscFunctionReturn(0); 512 } 513 514 /*@C 515 PetscRealView - Prints an array of doubles; useful for debugging. 516 517 Collective on PetscViewer 518 519 Input Parameters: 520 + N - number of PetscReal in array 521 . idx - array of PetscReal 522 - viewer - location to print array, PETSC_VIEWER_STDOUT_WORLD, PETSC_VIEWER_STDOUT_SELF or 0 523 524 Level: intermediate 525 526 Developer Notes: 527 idx cannot be const because may be passed to binary viewer where byte swapping is done 528 529 .seealso: PetscIntView() 530 @*/ 531 PetscErrorCode PetscRealView(PetscInt N,const PetscReal idx[],PetscViewer viewer) 532 { 533 PetscErrorCode ierr; 534 PetscMPIInt rank,size; 535 PetscInt j,i,n = N/5,p = N % 5; 536 PetscBool iascii,isbinary; 537 MPI_Comm comm; 538 539 PetscFunctionBegin; 540 if (!viewer) viewer = PETSC_VIEWER_STDOUT_SELF; 541 PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,3); 542 PetscValidScalarPointer(idx,2); 543 ierr = PetscObjectGetComm((PetscObject)viewer,&comm);CHKERRQ(ierr); 544 ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr); 545 ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 546 547 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 548 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr); 549 if (iascii) { 550 ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr); 551 for (i=0; i<n; i++) { 552 if (size > 1) { 553 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] %2d:",rank ,(int)5*i);CHKERRQ(ierr); 554 } else { 555 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"%2d:",(int)5*i);CHKERRQ(ierr); 556 } 557 for (j=0; j<5; j++) { 558 ierr = PetscViewerASCIISynchronizedPrintf(viewer," %12.4e",(double)idx[i*5+j]);CHKERRQ(ierr); 559 } 560 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr); 561 } 562 if (p) { 563 if (size > 1) { 564 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] %2d:",rank ,(int)5*n);CHKERRQ(ierr); 565 } else { 566 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"%2d:",(int)5*n);CHKERRQ(ierr); 567 } 568 for (i=0; i<p; i++) { PetscViewerASCIISynchronizedPrintf(viewer," %12.4e",(double)idx[5*n+i]);CHKERRQ(ierr);} 569 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr); 570 } 571 ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 572 ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr); 573 } else if (isbinary) { 574 PetscMPIInt *sizes,*displs, Ntotal,NN; 575 PetscReal *array; 576 577 ierr = PetscMPIIntCast(N,&NN);CHKERRQ(ierr); 578 579 if (size > 1) { 580 if (rank) { 581 ierr = MPI_Gather(&NN,1,MPI_INT,0,0,MPI_INT,0,comm);CHKERRQ(ierr); 582 ierr = MPI_Gatherv((PetscReal*)idx,NN,MPIU_REAL,0,0,0,MPIU_REAL,0,comm);CHKERRQ(ierr); 583 } else { 584 ierr = PetscMalloc1(size,&sizes);CHKERRQ(ierr); 585 ierr = MPI_Gather(&NN,1,MPI_INT,sizes,1,MPI_INT,0,comm);CHKERRQ(ierr); 586 Ntotal = sizes[0]; 587 ierr = PetscMalloc1(size,&displs);CHKERRQ(ierr); 588 displs[0] = 0; 589 for (i=1; i<size; i++) { 590 Ntotal += sizes[i]; 591 displs[i] = displs[i-1] + sizes[i-1]; 592 } 593 ierr = PetscMalloc1(Ntotal,&array);CHKERRQ(ierr); 594 ierr = MPI_Gatherv((PetscReal*)idx,NN,MPIU_REAL,array,sizes,displs,MPIU_REAL,0,comm);CHKERRQ(ierr); 595 ierr = PetscViewerBinaryWrite(viewer,array,Ntotal,PETSC_REAL,PETSC_TRUE);CHKERRQ(ierr); 596 ierr = PetscFree(sizes);CHKERRQ(ierr); 597 ierr = PetscFree(displs);CHKERRQ(ierr); 598 ierr = PetscFree(array);CHKERRQ(ierr); 599 } 600 } else { 601 ierr = PetscViewerBinaryWrite(viewer,(void*) idx,N,PETSC_REAL,PETSC_FALSE);CHKERRQ(ierr); 602 } 603 } else { 604 const char *tname; 605 ierr = PetscObjectGetName((PetscObject)viewer,&tname);CHKERRQ(ierr); 606 SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot handle that PetscViewer of type %s",tname); 607 } 608 PetscFunctionReturn(0); 609 } 610 611 /*@C 612 PetscScalarView - Prints an array of scalars; useful for debugging. 613 614 Collective on PetscViewer 615 616 Input Parameters: 617 + N - number of scalars in array 618 . idx - array of scalars 619 - viewer - location to print array, PETSC_VIEWER_STDOUT_WORLD, PETSC_VIEWER_STDOUT_SELF or 0 620 621 Level: intermediate 622 623 Developer Notes: 624 idx cannot be const because may be passed to binary viewer where byte swapping is done 625 626 .seealso: PetscIntView(), PetscRealView() 627 @*/ 628 PetscErrorCode PetscScalarView(PetscInt N,const PetscScalar idx[],PetscViewer viewer) 629 { 630 PetscErrorCode ierr; 631 PetscMPIInt rank,size; 632 PetscInt j,i,n = N/3,p = N % 3; 633 PetscBool iascii,isbinary; 634 MPI_Comm comm; 635 636 PetscFunctionBegin; 637 if (!viewer) viewer = PETSC_VIEWER_STDOUT_SELF; 638 PetscValidHeader(viewer,3); 639 if (N) PetscValidScalarPointer(idx,2); 640 ierr = PetscObjectGetComm((PetscObject)viewer,&comm);CHKERRQ(ierr); 641 ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr); 642 ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 643 644 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 645 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr); 646 if (iascii) { 647 ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr); 648 for (i=0; i<n; i++) { 649 if (size > 1) { 650 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] %2d:",rank ,3*i);CHKERRQ(ierr); 651 } else { 652 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"%2d:",3*i);CHKERRQ(ierr); 653 } 654 for (j=0; j<3; j++) { 655 #if defined(PETSC_USE_COMPLEX) 656 ierr = PetscViewerASCIISynchronizedPrintf(viewer," (%12.4e,%12.4e)", (double)PetscRealPart(idx[i*3+j]),(double)PetscImaginaryPart(idx[i*3+j]));CHKERRQ(ierr); 657 #else 658 ierr = PetscViewerASCIISynchronizedPrintf(viewer," %12.4e",(double)idx[i*3+j]);CHKERRQ(ierr); 659 #endif 660 } 661 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr); 662 } 663 if (p) { 664 if (size > 1) { 665 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] %2d:",rank ,3*n);CHKERRQ(ierr); 666 } else { 667 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"%2d:",3*n);CHKERRQ(ierr); 668 } 669 for (i=0; i<p; i++) { 670 #if defined(PETSC_USE_COMPLEX) 671 ierr = PetscViewerASCIISynchronizedPrintf(viewer," (%12.4e,%12.4e)", (double)PetscRealPart(idx[n*3+i]),(double)PetscImaginaryPart(idx[n*3+i]));CHKERRQ(ierr); 672 #else 673 ierr = PetscViewerASCIISynchronizedPrintf(viewer," %12.4e",(double)idx[3*n+i]);CHKERRQ(ierr); 674 #endif 675 } 676 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr); 677 } 678 ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 679 ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr); 680 } else if (isbinary) { 681 PetscMPIInt *sizes,Ntotal,*displs,NN; 682 PetscScalar *array; 683 684 ierr = PetscMPIIntCast(N,&NN);CHKERRQ(ierr); 685 686 if (size > 1) { 687 if (rank) { 688 ierr = MPI_Gather(&NN,1,MPI_INT,0,0,MPI_INT,0,comm);CHKERRQ(ierr); 689 ierr = MPI_Gatherv((void*)idx,NN,MPIU_SCALAR,0,0,0,MPIU_SCALAR,0,comm);CHKERRQ(ierr); 690 } else { 691 ierr = PetscMalloc1(size,&sizes);CHKERRQ(ierr); 692 ierr = MPI_Gather(&NN,1,MPI_INT,sizes,1,MPI_INT,0,comm);CHKERRQ(ierr); 693 Ntotal = sizes[0]; 694 ierr = PetscMalloc1(size,&displs);CHKERRQ(ierr); 695 displs[0] = 0; 696 for (i=1; i<size; i++) { 697 Ntotal += sizes[i]; 698 displs[i] = displs[i-1] + sizes[i-1]; 699 } 700 ierr = PetscMalloc1(Ntotal,&array);CHKERRQ(ierr); 701 ierr = MPI_Gatherv((void*)idx,NN,MPIU_SCALAR,array,sizes,displs,MPIU_SCALAR,0,comm);CHKERRQ(ierr); 702 ierr = PetscViewerBinaryWrite(viewer,array,Ntotal,PETSC_SCALAR,PETSC_TRUE);CHKERRQ(ierr); 703 ierr = PetscFree(sizes);CHKERRQ(ierr); 704 ierr = PetscFree(displs);CHKERRQ(ierr); 705 ierr = PetscFree(array);CHKERRQ(ierr); 706 } 707 } else { 708 ierr = PetscViewerBinaryWrite(viewer,(void*) idx,N,PETSC_SCALAR,PETSC_FALSE);CHKERRQ(ierr); 709 } 710 } else { 711 const char *tname; 712 ierr = PetscObjectGetName((PetscObject)viewer,&tname);CHKERRQ(ierr); 713 SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot handle that PetscViewer of type %s",tname); 714 } 715 PetscFunctionReturn(0); 716 } 717 718 719 720 721