1 2 /* 3 Code that allows one to set the error handlers 4 */ 5 #include <petsc-private/petscimpl.h> /*I "petscsys.h" I*/ 6 #include <petscviewer.h> 7 8 typedef struct _EH *EH; 9 struct _EH { 10 PetscErrorCode (*handler)(MPI_Comm,int,const char*,const char*,PetscErrorCode,PetscErrorType,const char*,void*); 11 void *ctx; 12 EH previous; 13 }; 14 15 static EH eh = 0; 16 17 #undef __FUNCT__ 18 #define __FUNCT__ "PetscEmacsClientErrorHandler" 19 /*@C 20 PetscEmacsClientErrorHandler - Error handler that uses the emacsclient program to 21 load the file where the error occured. Then calls the "previous" error handler. 22 23 Not Collective 24 25 Input Parameters: 26 + comm - communicator over which error occured 27 . line - the line number of the error (indicated by __LINE__) 28 . func - the function where error is detected (indicated by __FUNCT__) 29 . file - the file in which the error was detected (indicated by __FILE__) 30 . mess - an error text string, usually just printed to the screen 31 . n - the generic error number 32 . p - specific error number 33 - ctx - error handler context 34 35 Options Database Key: 36 . -on_error_emacs <machinename> 37 38 Level: developer 39 40 Notes: 41 You must put (server-start) in your .emacs file for the emacsclient software to work 42 43 Most users need not directly employ this routine and the other error 44 handlers, but can instead use the simplified interface SETERRQ, which has 45 the calling sequence 46 $ SETERRQ(PETSC_COMM_SELF,number,p,mess) 47 48 Notes for experienced users: 49 Use PetscPushErrorHandler() to set the desired error handler. 50 51 Developer Note: Since this is an error handler it cannot call CHKERRQ(); thus we just return if an error is detected. 52 53 Concepts: emacs^going to on error 54 Concepts: error handler^going to line in emacs 55 56 .seealso: PetscPushErrorHandler(), PetscAttachDebuggerErrorHandler(), 57 PetscAbortErrorHandler() 58 @*/ 59 PetscErrorCode PetscEmacsClientErrorHandler(MPI_Comm comm,int line,const char *fun,const char *file,PetscErrorCode n,PetscErrorType p,const char *mess,void *ctx) 60 { 61 PetscErrorCode ierr; 62 char command[PETSC_MAX_PATH_LEN]; 63 const char *pdir; 64 FILE *fp; 65 int rval; 66 67 PetscFunctionBegin; 68 ierr = PetscGetPetscDir(&pdir);if (ierr) PetscFunctionReturn(ierr); 69 sprintf(command,"cd %s; emacsclient --no-wait +%d %s\n",pdir,line,file); 70 #if defined(PETSC_HAVE_POPEN) 71 ierr = PetscPOpen(MPI_COMM_WORLD,(char*)ctx,command,"r",&fp);if (ierr) PetscFunctionReturn(ierr); 72 ierr = PetscPClose(MPI_COMM_WORLD,fp,&rval);if (ierr) PetscFunctionReturn(ierr); 73 #else 74 SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP_SYS,"Cannot run external programs on this machine"); 75 #endif 76 ierr = PetscPopErrorHandler();if (ierr) PetscFunctionReturn(ierr); /* remove this handler from the stack of handlers */ 77 if (!eh) { 78 ierr = PetscTraceBackErrorHandler(comm,line,fun,file,n,p,mess,0);if (ierr) PetscFunctionReturn(ierr); 79 } else { 80 ierr = (*eh->handler)(comm,line,fun,file,n,p,mess,eh->ctx);if (ierr) PetscFunctionReturn(ierr); 81 } 82 PetscFunctionReturn(ierr); 83 } 84 85 #undef __FUNCT__ 86 #define __FUNCT__ "PetscPushErrorHandler" 87 /*@C 88 PetscPushErrorHandler - Sets a routine to be called on detection of errors. 89 90 Not Collective 91 92 Input Parameters: 93 + handler - error handler routine 94 - ctx - optional handler context that contains information needed by the handler (for 95 example file pointers for error messages etc.) 96 97 Calling sequence of handler: 98 $ int handler(MPI_Comm comm,int line,char *func,char *file,PetscErrorCode n,int p,char *mess,void *ctx); 99 100 + comm - communicator over which error occured 101 . func - the function where the error occured (indicated by __FUNCT__) 102 . line - the line number of the error (indicated by __LINE__) 103 . file - the file in which the error was detected (indicated by __FILE__) 104 . n - the generic error number (see list defined in include/petscerror.h) 105 . p - PETSC_ERROR_INITIAL if error just detected, otherwise PETSC_ERROR_REPEAT 106 . mess - an error text string, usually just printed to the screen 107 - ctx - the error handler context 108 109 Options Database Keys: 110 + -on_error_attach_debugger <noxterm,gdb or dbx> 111 - -on_error_abort 112 113 Level: intermediate 114 115 Notes: 116 The currently available PETSc error handlers include PetscTraceBackErrorHandler(), 117 PetscAttachDebuggerErrorHandler(), PetscAbortErrorHandler(), and PetscMPIAbortErrorHandler(), PetscReturnErrorHandler(). 118 119 Fortran Notes: You can only push one error handler from Fortran before poping it. 120 121 .seealso: PetscPopErrorHandler(), PetscAttachDebuggerErrorHandler(), PetscAbortErrorHandler(), PetscTraceBackErrorHandler(), PetscPushSignalHandler() 122 123 @*/ 124 PetscErrorCode PetscPushErrorHandler(PetscErrorCode (*handler)(MPI_Comm comm,int,const char*,const char*,PetscErrorCode,PetscErrorType,const char*,void*),void *ctx) 125 { 126 EH neweh; 127 PetscErrorCode ierr; 128 129 PetscFunctionBegin; 130 ierr = PetscNew(&neweh);CHKERRQ(ierr); 131 if (eh) neweh->previous = eh; 132 else neweh->previous = 0; 133 neweh->handler = handler; 134 neweh->ctx = ctx; 135 eh = neweh; 136 PetscFunctionReturn(0); 137 } 138 139 #undef __FUNCT__ 140 #define __FUNCT__ "PetscPopErrorHandler" 141 /*@ 142 PetscPopErrorHandler - Removes the latest error handler that was 143 pushed with PetscPushErrorHandler(). 144 145 Not Collective 146 147 Level: intermediate 148 149 Concepts: error handler^setting 150 151 .seealso: PetscPushErrorHandler() 152 @*/ 153 PetscErrorCode PetscPopErrorHandler(void) 154 { 155 EH tmp; 156 PetscErrorCode ierr; 157 158 PetscFunctionBegin; 159 if (!eh) PetscFunctionReturn(0); 160 tmp = eh; 161 eh = eh->previous; 162 ierr = PetscFree(tmp);CHKERRQ(ierr); 163 PetscFunctionReturn(0); 164 } 165 166 #undef __FUNCT__ 167 #define __FUNCT__ "PetscReturnErrorHandler" 168 /*@C 169 PetscReturnErrorHandler - Error handler that causes a return to the current 170 level. 171 172 Not Collective 173 174 Input Parameters: 175 + comm - communicator over which error occurred 176 . line - the line number of the error (indicated by __LINE__) 177 . func - the function where error is detected (indicated by __FUNCT__) 178 . file - the file in which the error was detected (indicated by __FILE__) 179 . mess - an error text string, usually just printed to the screen 180 . n - the generic error number 181 . p - specific error number 182 - ctx - error handler context 183 184 Level: developer 185 186 Notes: 187 Most users need not directly employ this routine and the other error 188 handlers, but can instead use the simplified interface SETERRQ, which has 189 the calling sequence 190 $ SETERRQ(comm,number,mess) 191 192 Notes for experienced users: 193 This routine is good for catching errors such as zero pivots in preconditioners 194 or breakdown of iterative methods. It is not appropriate for memory violations 195 and similar errors. 196 197 Use PetscPushErrorHandler() to set the desired error handler. The 198 currently available PETSc error handlers include PetscTraceBackErrorHandler(), 199 PetscAttachDebuggerErrorHandler(), PetscAbortErrorHandler(), and PetscAbortErrorHandler() 200 201 Concepts: error handler 202 203 .seealso: PetscPushErrorHandler(), PetscPopErrorHandler(). 204 @*/ 205 206 PetscErrorCode PetscReturnErrorHandler(MPI_Comm comm,int line,const char *fun,const char *file,PetscErrorCode n,PetscErrorType p,const char *mess,void *ctx) 207 { 208 PetscFunctionBegin; 209 PetscFunctionReturn(n); 210 } 211 212 static char PetscErrorBaseMessage[1024]; 213 /* 214 The numerical values for these are defined in include/petscerror.h; any changes 215 there must also be made here 216 */ 217 static const char *PetscErrorStrings[] = { 218 /*55 */ "Out of memory", 219 "No support for this operation for this object type", 220 "No support for this operation on this system", 221 /*58 */ "Operation done in wrong order", 222 /*59 */ "Signal received", 223 /*60 */ "Nonconforming object sizes", 224 "Argument aliasing not permitted", 225 "Invalid argument", 226 /*63 */ "Argument out of range", 227 "Corrupt argument:\nsee http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind", 228 "Unable to open file", 229 "Read from file failed", 230 "Write to file failed", 231 "Invalid pointer", 232 /*69 */ "Arguments must have same type", 233 /*70 */ "Attempt to use a pointer that does not point to a valid accessible location", 234 /*71 */ "Detected zero pivot in LU factorization:\nsee http://www.mcs.anl.gov/petsc/documentation/faq.html#ZeroPivot", 235 /*72 */ "Floating point exception", 236 /*73 */ "Object is in wrong state", 237 "Corrupted Petsc object", 238 "Arguments are incompatible", 239 "Error in external library", 240 /*77 */ "Petsc has generated inconsistent data", 241 "Memory corruption", 242 "Unexpected data in file", 243 /*80 */ "Arguments must have same communicators", 244 /*81 */ "Detected zero pivot in Cholesky factorization:\nsee http://www.mcs.anl.gov/petsc/documentation/faq.html#ZeroPivot", 245 " ", 246 " ", 247 "Overflow in integer operation:\nsee http://www.mcs.anl.gov/petsc/documentation/faq.html#64-bit-indices", 248 /*85 */ "Null argument, when expecting valid pointer", 249 /*86 */ "Unknown type. Check for miss-spelling or missing external package needed for type:\nsee http://www.mcs.anl.gov/petsc/documentation/installation.html#external", 250 /*87 */ "Not used", 251 /*88 */ "Error in system call", 252 /*89 */ "Object Type not set:\nsee http://www.mcs.anl.gov/petsc/documentation/faq.html#objecttypenotset" 253 /*90 */ " ", 254 /* */ " ", 255 /* */ " ", 256 /* */ " ", 257 /* */ " ", 258 /*95 */ " ", 259 }; 260 261 #undef __FUNCT__ 262 #define __FUNCT__ "PetscErrorMessage" 263 /*@C 264 PetscErrorMessage - returns the text string associated with a PETSc error code. 265 266 Not Collective 267 268 Input Parameter: 269 . errnum - the error code 270 271 Output Parameter: 272 + text - the error message (NULL if not desired) 273 - specific - the specific error message that was set with SETERRxxx() or PetscError(). (NULL if not desired) 274 275 Level: developer 276 277 Concepts: error handler^messages 278 279 .seealso: PetscPushErrorHandler(), PetscAttachDebuggerErrorHandler(), 280 PetscAbortErrorHandler(), PetscTraceBackErrorHandler() 281 @*/ 282 PetscErrorCode PetscErrorMessage(int errnum,const char *text[],char **specific) 283 { 284 PetscFunctionBegin; 285 if (text && errnum > PETSC_ERR_MIN_VALUE && errnum < PETSC_ERR_MAX_VALUE) *text = PetscErrorStrings[errnum-PETSC_ERR_MIN_VALUE-1]; 286 else if (text) *text = 0; 287 288 if (specific) *specific = PetscErrorBaseMessage; 289 PetscFunctionReturn(0); 290 } 291 292 #if defined(PETSC_CLANGUAGE_CXX) 293 /* C++ exceptions are formally not allowed to propagate through extern "C" code. In practice, far too much software 294 * would be broken if implementations did not handle it it some common cases. However, keep in mind 295 * 296 * Rule 62. Don't allow exceptions to propagate across module boundaries 297 * 298 * in "C++ Coding Standards" by Sutter and Alexandrescu. (This accounts for part of the ongoing C++ binary interface 299 * instability.) Having PETSc raise errors as C++ exceptions was probably misguided and should eventually be removed. 300 */ 301 #include <sstream> 302 static void PetscCxxErrorThrow() { 303 const char *str; 304 if (eh && eh->ctx) { 305 std::ostringstream *msg; 306 msg = (std::ostringstream*) eh->ctx; 307 str = msg->str().c_str(); 308 } else str = "Error detected in C PETSc"; 309 310 throw std::exception(str); 311 } 312 #endif 313 314 #undef __FUNCT__ 315 #define __FUNCT__ "PetscError" 316 /*@C 317 PetscError - Routine that is called when an error has been detected, 318 usually called through the macro SETERRQ(PETSC_COMM_SELF,). 319 320 Not Collective 321 322 Input Parameters: 323 + comm - communicator over which error occurred. ALL ranks of this communicator MUST call this routine 324 . line - the line number of the error (indicated by __LINE__) 325 . func - the function where the error occured (indicated by __FUNCT__) 326 . file - the file in which the error was detected (indicated by __FILE__) 327 . mess - an error text string, usually just printed to the screen 328 . n - the generic error number 329 . p - PETSC_ERROR_INITIAL indicates the error was initially detected, PETSC_ERROR_REPEAT indicates this is a traceback from a previously detected error 330 - mess - formatted message string - aka printf 331 332 Level: intermediate 333 334 Notes: 335 Most users need not directly use this routine and the error handlers, but 336 can instead use the simplified interface SETERRQ, which has the calling 337 sequence 338 $ SETERRQ(comm,n,mess) 339 340 Experienced users can set the error handler with PetscPushErrorHandler(). 341 342 Developer Note: Since this is called after an error condition it should not be calling any error handlers (currently it ignores any error codes) 343 BUT this routine does call regular PETSc functions that may call error handlers, this is problematic and could be fixed by never calling other PETSc routines 344 but this annoying. 345 346 Concepts: error^setting condition 347 348 .seealso: PetscTraceBackErrorHandler(), PetscPushErrorHandler(), SETERRQ(), CHKERRQ(), CHKMEMQ, SETERRQ1(), SETERRQ2() 349 @*/ 350 PetscErrorCode PetscError(MPI_Comm comm,int line,const char *func,const char *file,PetscErrorCode n,PetscErrorType p,const char *mess,...) 351 { 352 va_list Argp; 353 size_t fullLength; 354 char buf[2048],*lbuf = 0; 355 PetscBool ismain,isunknown; 356 PetscErrorCode ierr; 357 358 PetscFunctionBegin; 359 if (!func) func = "User provided function"; 360 if (!file) file = "User file"; 361 if (comm == MPI_COMM_NULL) comm = PETSC_COMM_SELF; 362 363 /* Compose the message evaluating the print format */ 364 if (mess) { 365 va_start(Argp,mess); 366 PetscVSNPrintf(buf,2048,mess,&fullLength,Argp); 367 va_end(Argp); 368 lbuf = buf; 369 if (p == 1) PetscStrncpy(PetscErrorBaseMessage,lbuf,1023); 370 } 371 372 if (!eh) ierr = PetscTraceBackErrorHandler(comm,line,func,file,n,p,lbuf,0); 373 else ierr = (*eh->handler)(comm,line,func,file,n,p,lbuf,eh->ctx); 374 375 /* 376 If this is called from the main() routine we call MPI_Abort() instead of 377 return to allow the parallel program to be properly shutdown. 378 379 Since this is in the error handler we don't check the errors below. Of course, 380 PetscStrncmp() does its own error checking which is problamatic 381 */ 382 PetscStrncmp(func,"main",4,&ismain); 383 PetscStrncmp(func,"unknown",7,&isunknown); 384 if (ismain || isunknown) MPI_Abort(PETSC_COMM_WORLD,(int)ierr); 385 386 #if defined(PETSC_CLANGUAGE_CXX) 387 if (p == PETSC_ERROR_IN_CXX) { 388 PetscCxxErrorThrow(); 389 } 390 #endif 391 PetscFunctionReturn(ierr); 392 } 393 394 /* -------------------------------------------------------------------------*/ 395 396 #undef __FUNCT__ 397 #define __FUNCT__ "PetscIntView" 398 /*@C 399 PetscIntView - Prints an array of integers; useful for debugging. 400 401 Collective on PetscViewer 402 403 Input Parameters: 404 + N - number of integers in array 405 . idx - array of integers 406 - viewer - location to print array, PETSC_VIEWER_STDOUT_WORLD, PETSC_VIEWER_STDOUT_SELF or 0 407 408 Level: intermediate 409 410 Developer Notes: idx cannot be const because may be passed to binary viewer where byte swappping is done 411 412 .seealso: PetscRealView() 413 @*/ 414 PetscErrorCode PetscIntView(PetscInt N,const PetscInt idx[],PetscViewer viewer) 415 { 416 PetscErrorCode ierr; 417 PetscInt j,i,n = N/20,p = N % 20; 418 PetscBool iascii,isbinary; 419 MPI_Comm comm; 420 421 PetscFunctionBegin; 422 if (!viewer) viewer = PETSC_VIEWER_STDOUT_SELF; 423 PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,3); 424 if (N) PetscValidIntPointer(idx,2); 425 ierr = PetscObjectGetComm((PetscObject)viewer,&comm);CHKERRQ(ierr); 426 427 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 428 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr); 429 if (iascii) { 430 ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_TRUE);CHKERRQ(ierr); 431 for (i=0; i<n; i++) { 432 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"%D:",20*i);CHKERRQ(ierr); 433 for (j=0; j<20; j++) { 434 ierr = PetscViewerASCIISynchronizedPrintf(viewer," %D",idx[i*20+j]);CHKERRQ(ierr); 435 } 436 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr); 437 } 438 if (p) { 439 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"%D:",20*n);CHKERRQ(ierr); 440 for (i=0; i<p; i++) { ierr = PetscViewerASCIISynchronizedPrintf(viewer," %D",idx[20*n+i]);CHKERRQ(ierr);} 441 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr); 442 } 443 ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 444 ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_FALSE);CHKERRQ(ierr); 445 } else if (isbinary) { 446 PetscMPIInt rank,size,*sizes,Ntotal,*displs,NN; 447 PetscInt *array; 448 449 ierr = PetscMPIIntCast(N,&NN);CHKERRQ(ierr); 450 ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 451 ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr); 452 453 if (size > 1) { 454 if (rank) { 455 ierr = MPI_Gather(&NN,1,MPI_INT,0,0,MPI_INT,0,comm);CHKERRQ(ierr); 456 ierr = MPI_Gatherv((void*)idx,NN,MPIU_INT,0,0,0,MPIU_INT,0,comm);CHKERRQ(ierr); 457 } else { 458 ierr = PetscMalloc1(size,&sizes);CHKERRQ(ierr); 459 ierr = MPI_Gather(&NN,1,MPI_INT,sizes,1,MPI_INT,0,comm);CHKERRQ(ierr); 460 Ntotal = sizes[0]; 461 ierr = PetscMalloc1(size,&displs);CHKERRQ(ierr); 462 displs[0] = 0; 463 for (i=1; i<size; i++) { 464 Ntotal += sizes[i]; 465 displs[i] = displs[i-1] + sizes[i-1]; 466 } 467 ierr = PetscMalloc1(Ntotal,&array);CHKERRQ(ierr); 468 ierr = MPI_Gatherv((void*)idx,NN,MPIU_INT,array,sizes,displs,MPIU_INT,0,comm);CHKERRQ(ierr); 469 ierr = PetscViewerBinaryWrite(viewer,array,Ntotal,PETSC_INT,PETSC_TRUE);CHKERRQ(ierr); 470 ierr = PetscFree(sizes);CHKERRQ(ierr); 471 ierr = PetscFree(displs);CHKERRQ(ierr); 472 ierr = PetscFree(array);CHKERRQ(ierr); 473 } 474 } else { 475 ierr = PetscViewerBinaryWrite(viewer,(void*) idx,N,PETSC_INT,PETSC_FALSE);CHKERRQ(ierr); 476 } 477 } else { 478 const char *tname; 479 ierr = PetscObjectGetName((PetscObject)viewer,&tname);CHKERRQ(ierr); 480 SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot handle that PetscViewer of type %s",tname); 481 } 482 PetscFunctionReturn(0); 483 } 484 485 #undef __FUNCT__ 486 #define __FUNCT__ "PetscRealView" 487 /*@C 488 PetscRealView - Prints an array of doubles; useful for debugging. 489 490 Collective on PetscViewer 491 492 Input Parameters: 493 + N - number of PetscReal in array 494 . idx - array of PetscReal 495 - viewer - location to print array, PETSC_VIEWER_STDOUT_WORLD, PETSC_VIEWER_STDOUT_SELF or 0 496 497 Level: intermediate 498 499 Developer Notes: idx cannot be const because may be passed to binary viewer where byte swappping is done 500 501 .seealso: PetscIntView() 502 @*/ 503 PetscErrorCode PetscRealView(PetscInt N,const PetscReal idx[],PetscViewer viewer) 504 { 505 PetscErrorCode ierr; 506 PetscInt j,i,n = N/5,p = N % 5; 507 PetscBool iascii,isbinary; 508 MPI_Comm comm; 509 510 PetscFunctionBegin; 511 if (!viewer) viewer = PETSC_VIEWER_STDOUT_SELF; 512 PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,3); 513 PetscValidScalarPointer(idx,2); 514 ierr = PetscObjectGetComm((PetscObject)viewer,&comm);CHKERRQ(ierr); 515 516 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 517 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr); 518 if (iascii) { 519 ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_TRUE);CHKERRQ(ierr); 520 for (i=0; i<n; i++) { 521 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"%2d:",5*i);CHKERRQ(ierr); 522 for (j=0; j<5; j++) { 523 ierr = PetscViewerASCIISynchronizedPrintf(viewer," %12.4e",(double)idx[i*5+j]);CHKERRQ(ierr); 524 } 525 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr); 526 } 527 if (p) { 528 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"%2d:",5*n);CHKERRQ(ierr); 529 for (i=0; i<p; i++) { PetscViewerASCIISynchronizedPrintf(viewer," %12.4e",(double)idx[5*n+i]);CHKERRQ(ierr);} 530 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr); 531 } 532 ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 533 ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_FALSE);CHKERRQ(ierr); 534 } else if (isbinary) { 535 PetscMPIInt rank,size,*sizes,*displs, Ntotal,NN; 536 PetscReal *array; 537 538 ierr = PetscMPIIntCast(N,&NN);CHKERRQ(ierr); 539 ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 540 ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr); 541 542 if (size > 1) { 543 if (rank) { 544 ierr = MPI_Gather(&NN,1,MPI_INT,0,0,MPI_INT,0,comm);CHKERRQ(ierr); 545 ierr = MPI_Gatherv((PetscReal*)idx,NN,MPIU_REAL,0,0,0,MPIU_REAL,0,comm);CHKERRQ(ierr); 546 } else { 547 ierr = PetscMalloc1(size,&sizes);CHKERRQ(ierr); 548 ierr = MPI_Gather(&NN,1,MPI_INT,sizes,1,MPI_INT,0,comm);CHKERRQ(ierr); 549 Ntotal = sizes[0]; 550 ierr = PetscMalloc1(size,&displs);CHKERRQ(ierr); 551 displs[0] = 0; 552 for (i=1; i<size; i++) { 553 Ntotal += sizes[i]; 554 displs[i] = displs[i-1] + sizes[i-1]; 555 } 556 ierr = PetscMalloc1(Ntotal,&array);CHKERRQ(ierr); 557 ierr = MPI_Gatherv((PetscReal*)idx,NN,MPIU_REAL,array,sizes,displs,MPIU_REAL,0,comm);CHKERRQ(ierr); 558 ierr = PetscViewerBinaryWrite(viewer,array,Ntotal,PETSC_REAL,PETSC_TRUE);CHKERRQ(ierr); 559 ierr = PetscFree(sizes);CHKERRQ(ierr); 560 ierr = PetscFree(displs);CHKERRQ(ierr); 561 ierr = PetscFree(array);CHKERRQ(ierr); 562 } 563 } else { 564 ierr = PetscViewerBinaryWrite(viewer,(void*) idx,N,PETSC_REAL,PETSC_FALSE);CHKERRQ(ierr); 565 } 566 } else { 567 const char *tname; 568 ierr = PetscObjectGetName((PetscObject)viewer,&tname);CHKERRQ(ierr); 569 SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot handle that PetscViewer of type %s",tname); 570 } 571 PetscFunctionReturn(0); 572 } 573 574 #undef __FUNCT__ 575 #define __FUNCT__ "PetscScalarView" 576 /*@C 577 PetscScalarView - Prints an array of scalars; useful for debugging. 578 579 Collective on PetscViewer 580 581 Input Parameters: 582 + N - number of scalars in array 583 . idx - array of scalars 584 - viewer - location to print array, PETSC_VIEWER_STDOUT_WORLD, PETSC_VIEWER_STDOUT_SELF or 0 585 586 Level: intermediate 587 588 Developer Notes: idx cannot be const because may be passed to binary viewer where byte swappping is done 589 590 .seealso: PetscIntView(), PetscRealView() 591 @*/ 592 PetscErrorCode PetscScalarView(PetscInt N,const PetscScalar idx[],PetscViewer viewer) 593 { 594 PetscErrorCode ierr; 595 PetscInt j,i,n = N/3,p = N % 3; 596 PetscBool iascii,isbinary; 597 MPI_Comm comm; 598 599 PetscFunctionBegin; 600 if (!viewer) viewer = PETSC_VIEWER_STDOUT_SELF; 601 PetscValidHeader(viewer,3); 602 PetscValidScalarPointer(idx,2); 603 ierr = PetscObjectGetComm((PetscObject)viewer,&comm);CHKERRQ(ierr); 604 605 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 606 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr); 607 if (iascii) { 608 ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_TRUE);CHKERRQ(ierr); 609 for (i=0; i<n; i++) { 610 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"%2d:",3*i);CHKERRQ(ierr); 611 for (j=0; j<3; j++) { 612 #if defined(PETSC_USE_COMPLEX) 613 ierr = PetscViewerASCIISynchronizedPrintf(viewer," (%12.4e,%12.4e)", (double)PetscRealPart(idx[i*3+j]),(double)PetscImaginaryPart(idx[i*3+j]));CHKERRQ(ierr); 614 #else 615 ierr = PetscViewerASCIISynchronizedPrintf(viewer," %12.4e",(double)idx[i*3+j]);CHKERRQ(ierr); 616 #endif 617 } 618 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr); 619 } 620 if (p) { 621 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"%2d:",3*n);CHKERRQ(ierr); 622 for (i=0; i<p; i++) { 623 #if defined(PETSC_USE_COMPLEX) 624 ierr = PetscViewerASCIISynchronizedPrintf(viewer," (%12.4e,%12.4e)", (double)PetscRealPart(idx[n*3+i]),(double)PetscImaginaryPart(idx[n*3+i]));CHKERRQ(ierr); 625 #else 626 ierr = PetscViewerASCIISynchronizedPrintf(viewer," %12.4e",(double)idx[3*n+i]);CHKERRQ(ierr); 627 #endif 628 } 629 ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr); 630 } 631 ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 632 ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_FALSE);CHKERRQ(ierr); 633 } else if (isbinary) { 634 PetscMPIInt size,rank,*sizes,Ntotal,*displs,NN; 635 PetscScalar *array; 636 637 ierr = PetscMPIIntCast(N,&NN);CHKERRQ(ierr); 638 ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 639 ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr); 640 641 if (size > 1) { 642 if (rank) { 643 ierr = MPI_Gather(&NN,1,MPI_INT,0,0,MPI_INT,0,comm);CHKERRQ(ierr); 644 ierr = MPI_Gatherv((void*)idx,NN,MPIU_SCALAR,0,0,0,MPIU_SCALAR,0,comm);CHKERRQ(ierr); 645 } else { 646 ierr = PetscMalloc1(size,&sizes);CHKERRQ(ierr); 647 ierr = MPI_Gather(&NN,1,MPI_INT,sizes,1,MPI_INT,0,comm);CHKERRQ(ierr); 648 Ntotal = sizes[0]; 649 ierr = PetscMalloc1(size,&displs);CHKERRQ(ierr); 650 displs[0] = 0; 651 for (i=1; i<size; i++) { 652 Ntotal += sizes[i]; 653 displs[i] = displs[i-1] + sizes[i-1]; 654 } 655 ierr = PetscMalloc1(Ntotal,&array);CHKERRQ(ierr); 656 ierr = MPI_Gatherv((void*)idx,NN,MPIU_SCALAR,array,sizes,displs,MPIU_SCALAR,0,comm);CHKERRQ(ierr); 657 ierr = PetscViewerBinaryWrite(viewer,array,Ntotal,PETSC_SCALAR,PETSC_TRUE);CHKERRQ(ierr); 658 ierr = PetscFree(sizes);CHKERRQ(ierr); 659 ierr = PetscFree(displs);CHKERRQ(ierr); 660 ierr = PetscFree(array);CHKERRQ(ierr); 661 } 662 } else { 663 ierr = PetscViewerBinaryWrite(viewer,(void*) idx,N,PETSC_SCALAR,PETSC_FALSE);CHKERRQ(ierr); 664 } 665 } else { 666 const char *tname; 667 ierr = PetscObjectGetName((PetscObject)viewer,&tname);CHKERRQ(ierr); 668 SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot handle that PetscViewer of type %s",tname); 669 } 670 PetscFunctionReturn(0); 671 } 672 673 674 675 676