xref: /petsc/src/sys/memory/mtr.c (revision efca3c55b02548817e185e5069a2acfe20fa4458)
17d0a6c19SBarry Smith 
2e5c89e4eSSatish Balay /*
3e5c89e4eSSatish Balay      Interface to malloc() and free(). This code allows for
4e5c89e4eSSatish Balay   logging of memory usage and some error checking
5e5c89e4eSSatish Balay */
6c6db04a5SJed Brown #include <petscsys.h>           /*I "petscsys.h" I*/
7665c2dedSJed Brown #include <petscviewer.h>
8e5c89e4eSSatish Balay #if defined(PETSC_HAVE_MALLOC_H)
9e5c89e4eSSatish Balay #include <malloc.h>
10e5c89e4eSSatish Balay #endif
11e5c89e4eSSatish Balay 
12e5c89e4eSSatish Balay 
13e5c89e4eSSatish Balay /*
14e5c89e4eSSatish Balay      These are defined in mal.c and ensure that malloced space is PetscScalar aligned
15e5c89e4eSSatish Balay */
16*efca3c55SSatish Balay extern PetscErrorCode  PetscMallocAlign(size_t,int,const char[],const char[],void**);
17*efca3c55SSatish Balay extern PetscErrorCode  PetscFreeAlign(void*,int,const char[],const char[]);
18*efca3c55SSatish Balay extern PetscErrorCode  PetscTrMallocDefault(size_t,int,const char[],const char[],void**);
19*efca3c55SSatish Balay extern PetscErrorCode  PetscTrFreeDefault(void*,int,const char[],const char[]);
20e5c89e4eSSatish Balay 
21e5c89e4eSSatish Balay 
220700a824SBarry Smith #define CLASSID_VALUE   ((PetscClassId) 0xf0e0d0c9)
230700a824SBarry Smith #define ALREADY_FREED  ((PetscClassId) 0x0f0e0d9c)
24e5c89e4eSSatish Balay 
25e5c89e4eSSatish Balay typedef struct _trSPACE {
26e5c89e4eSSatish Balay   size_t       size;
27e5c89e4eSSatish Balay   int          id;
28e5c89e4eSSatish Balay   int          lineno;
29e5c89e4eSSatish Balay   const char   *filename;
30e5c89e4eSSatish Balay   const char   *functionname;
310700a824SBarry Smith   PetscClassId classid;
328bf1f09cSShri Abhyankar #if defined(PETSC_USE_DEBUG)
33e5c89e4eSSatish Balay   PetscStack   stack;
34e5c89e4eSSatish Balay #endif
35e5c89e4eSSatish Balay   struct _trSPACE *next,*prev;
36e5c89e4eSSatish Balay } TRSPACE;
37e5c89e4eSSatish Balay 
3825b53cc9SJed Brown /* HEADER_BYTES is the number of bytes in a PetscMalloc() header.
3925b53cc9SJed Brown    It is sizeof(TRSPACE) padded to be a multiple of PETSC_MEMALIGN.
4025b53cc9SJed Brown */
41e5c89e4eSSatish Balay 
42a64a8e02SBarry Smith #define HEADER_BYTES      ((sizeof(TRSPACE)+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
43e5c89e4eSSatish Balay 
44e5c89e4eSSatish Balay 
4525b53cc9SJed Brown /* This union is used to insure that the block passed to the user retains
4625b53cc9SJed Brown    a minimum alignment of PETSC_MEMALIGN.
4725b53cc9SJed Brown */
48e5c89e4eSSatish Balay typedef union {
49e5c89e4eSSatish Balay   TRSPACE sp;
5025b53cc9SJed Brown   char    v[HEADER_BYTES];
51e5c89e4eSSatish Balay } TrSPACE;
52e5c89e4eSSatish Balay 
53b022a5c1SBarry Smith 
54e5c89e4eSSatish Balay static size_t    TRallocated  = 0;
55e5c89e4eSSatish Balay static int       TRfrags      = 0;
56e5c89e4eSSatish Balay static TRSPACE   *TRhead      = 0;
57e5c89e4eSSatish Balay static int       TRid         = 0;
58ace3abfcSBarry Smith static PetscBool TRdebugLevel = PETSC_FALSE;
59e5c89e4eSSatish Balay static size_t    TRMaxMem     = 0;
60e5c89e4eSSatish Balay /*
61e5c89e4eSSatish Balay       Arrays to log information on all Mallocs
62e5c89e4eSSatish Balay */
63e5c89e4eSSatish Balay static int        PetscLogMallocMax       = 10000,PetscLogMalloc = -1;
64574034a9SJed Brown static size_t     PetscLogMallocThreshold = 0;
65e5c89e4eSSatish Balay static size_t     *PetscLogMallocLength;
66*efca3c55SSatish Balay static const char **PetscLogMallocFile,**PetscLogMallocFunction;
67e5c89e4eSSatish Balay 
68e5c89e4eSSatish Balay #undef __FUNCT__
69b022a5c1SBarry Smith #define __FUNCT__ "PetscSetUseTrMalloc_Private"
70b022a5c1SBarry Smith PetscErrorCode PetscSetUseTrMalloc_Private(void)
71b022a5c1SBarry Smith {
72b022a5c1SBarry Smith   PetscErrorCode ierr;
73b022a5c1SBarry Smith 
74b022a5c1SBarry Smith   PetscFunctionBegin;
75b022a5c1SBarry Smith   ierr = PetscMallocSet(PetscTrMallocDefault,PetscTrFreeDefault);CHKERRQ(ierr);
76a297a907SKarl Rupp 
77b022a5c1SBarry Smith   TRallocated       = 0;
78b022a5c1SBarry Smith   TRfrags           = 0;
79b022a5c1SBarry Smith   TRhead            = 0;
80b022a5c1SBarry Smith   TRid              = 0;
81b022a5c1SBarry Smith   TRdebugLevel      = PETSC_FALSE;
82b022a5c1SBarry Smith   TRMaxMem          = 0;
83b022a5c1SBarry Smith   PetscLogMallocMax = 10000;
84b022a5c1SBarry Smith   PetscLogMalloc    = -1;
85b022a5c1SBarry Smith   PetscFunctionReturn(0);
86b022a5c1SBarry Smith }
87b022a5c1SBarry Smith 
88b022a5c1SBarry Smith #undef __FUNCT__
89e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocValidate"
90e5c89e4eSSatish Balay /*@C
91e5c89e4eSSatish Balay    PetscMallocValidate - Test the memory for corruption.  This can be used to
92e5c89e4eSSatish Balay    check for memory overwrites.
93e5c89e4eSSatish Balay 
94e5c89e4eSSatish Balay    Input Parameter:
95e5c89e4eSSatish Balay +  line - line number where call originated.
96e5c89e4eSSatish Balay .  function - name of function calling
97*efca3c55SSatish Balay -  file - file where function is
98e5c89e4eSSatish Balay 
99e5c89e4eSSatish Balay    Return value:
100e5c89e4eSSatish Balay    The number of errors detected.
101e5c89e4eSSatish Balay 
102e5c89e4eSSatish Balay    Output Effect:
103e5c89e4eSSatish Balay    Error messages are written to stdout.
104e5c89e4eSSatish Balay 
105e5c89e4eSSatish Balay    Level: advanced
106e5c89e4eSSatish Balay 
107e5c89e4eSSatish Balay    Notes:
108e5c89e4eSSatish Balay     You should generally use CHKMEMQ as a short cut for calling this
109e5c89e4eSSatish Balay     routine.
110e5c89e4eSSatish Balay 
111*efca3c55SSatish Balay     The line, function, file are given by the C preprocessor as
112*efca3c55SSatish Balay     __LINE__, __FUNCT__, __FILE__
113e5c89e4eSSatish Balay 
114e5c89e4eSSatish Balay     The Fortran calling sequence is simply PetscMallocValidate(ierr)
115e5c89e4eSSatish Balay 
116e5c89e4eSSatish Balay    No output is generated if there are no problems detected.
117e5c89e4eSSatish Balay 
118e5c89e4eSSatish Balay .seealso: CHKMEMQ
119e5c89e4eSSatish Balay 
120e5c89e4eSSatish Balay @*/
121*efca3c55SSatish Balay PetscErrorCode  PetscMallocValidate(int line,const char function[],const char file[])
122e5c89e4eSSatish Balay {
1236c093d5bSvictor   TRSPACE      *head,*lasthead;
124e5c89e4eSSatish Balay   char         *a;
1250700a824SBarry Smith   PetscClassId *nend;
126e5c89e4eSSatish Balay 
127e5c89e4eSSatish Balay   PetscFunctionBegin;
1286c093d5bSvictor   head = TRhead; lasthead = NULL;
129e5c89e4eSSatish Balay   while (head) {
1300700a824SBarry Smith     if (head->classid != CLASSID_VALUE) {
131*efca3c55SSatish Balay       (*PetscErrorPrintf)("PetscMallocValidate: error detected at  %s() line %d in %s\n",function,line,file);
132e5c89e4eSSatish Balay       (*PetscErrorPrintf)("Memory at address %p is corrupted\n",head);
133e5c89e4eSSatish Balay       (*PetscErrorPrintf)("Probably write past beginning or end of array\n");
134*efca3c55SSatish Balay       if (lasthead) (*PetscErrorPrintf)("Last intact block allocated in %s() line %d in %s\n",lasthead->functionname,lasthead->lineno,lasthead->filename);
135e32f2f54SBarry Smith       SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC," ");
136e5c89e4eSSatish Balay     }
137e5c89e4eSSatish Balay     a    = (char*)(((TrSPACE*)head) + 1);
1380700a824SBarry Smith     nend = (PetscClassId*)(a + head->size);
1390700a824SBarry Smith     if (*nend != CLASSID_VALUE) {
140*efca3c55SSatish Balay       (*PetscErrorPrintf)("PetscMallocValidate: error detected at %s() line %d in %s\n",function,line,file);
141e5c89e4eSSatish Balay       if (*nend == ALREADY_FREED) {
142e5c89e4eSSatish Balay         (*PetscErrorPrintf)("Memory [id=%d(%.0f)] at address %p already freed\n",head->id,(PetscLogDouble)head->size,a);
143e32f2f54SBarry Smith         SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC," ");
144e5c89e4eSSatish Balay       } else {
145e5c89e4eSSatish Balay         (*PetscErrorPrintf)("Memory [id=%d(%.0f)] at address %p is corrupted (probably write past end of array)\n",head->id,(PetscLogDouble)head->size,a);
146*efca3c55SSatish Balay         (*PetscErrorPrintf)("Memory originally allocated in %s() line %d in %s\n",head->functionname,head->lineno,head->filename);
147e32f2f54SBarry Smith         SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC," ");
148e5c89e4eSSatish Balay       }
149e5c89e4eSSatish Balay     }
1506c093d5bSvictor     lasthead = head;
151e5c89e4eSSatish Balay     head     = head->next;
152e5c89e4eSSatish Balay   }
153e5c89e4eSSatish Balay   PetscFunctionReturn(0);
154e5c89e4eSSatish Balay }
155e5c89e4eSSatish Balay 
156e5c89e4eSSatish Balay #undef __FUNCT__
157e5c89e4eSSatish Balay #define __FUNCT__ "PetscTrMallocDefault"
158e5c89e4eSSatish Balay /*
159e5c89e4eSSatish Balay     PetscTrMallocDefault - Malloc with tracing.
160e5c89e4eSSatish Balay 
161e5c89e4eSSatish Balay     Input Parameters:
162e5c89e4eSSatish Balay +   a   - number of bytes to allocate
163e5c89e4eSSatish Balay .   lineno - line number where used.  Use __LINE__ for this
164e5c89e4eSSatish Balay .   function - function calling routine. Use __FUNCT__ for this
165*efca3c55SSatish Balay -   filename  - file name where used.  Use __FILE__ for this
166e5c89e4eSSatish Balay 
167e5c89e4eSSatish Balay     Returns:
168e5c89e4eSSatish Balay     double aligned pointer to requested storage, or null if not
169e5c89e4eSSatish Balay     available.
170e5c89e4eSSatish Balay  */
171*efca3c55SSatish Balay PetscErrorCode  PetscTrMallocDefault(size_t a,int lineno,const char function[],const char filename[],void **result)
172e5c89e4eSSatish Balay {
173e5c89e4eSSatish Balay   TRSPACE        *head;
174e5c89e4eSSatish Balay   char           *inew;
175e5c89e4eSSatish Balay   size_t         nsize;
176e5c89e4eSSatish Balay   PetscErrorCode ierr;
177e5c89e4eSSatish Balay 
178e5c89e4eSSatish Balay   PetscFunctionBegin;
17917186662SBarry Smith   if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Trying to malloc zero size array");
1802a6744ebSBarry Smith 
181e5c89e4eSSatish Balay   if (TRdebugLevel) {
182*efca3c55SSatish Balay     ierr = PetscMallocValidate(lineno,function,filename); if (ierr) PetscFunctionReturn(ierr);
183e5c89e4eSSatish Balay   }
184e5c89e4eSSatish Balay 
18525b53cc9SJed Brown   nsize = (a + (PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1);
186*efca3c55SSatish Balay   ierr  = PetscMallocAlign(nsize+sizeof(TrSPACE)+sizeof(PetscClassId),lineno,function,filename,(void**)&inew);CHKERRQ(ierr);
187e5c89e4eSSatish Balay 
188e5c89e4eSSatish Balay   head  = (TRSPACE*)inew;
189e5c89e4eSSatish Balay   inew += sizeof(TrSPACE);
190e5c89e4eSSatish Balay 
191e5c89e4eSSatish Balay   if (TRhead) TRhead->prev = head;
192e5c89e4eSSatish Balay   head->next   = TRhead;
193e5c89e4eSSatish Balay   TRhead       = head;
194e5c89e4eSSatish Balay   head->prev   = 0;
195e5c89e4eSSatish Balay   head->size   = nsize;
196e5c89e4eSSatish Balay   head->id     = TRid;
197e5c89e4eSSatish Balay   head->lineno = lineno;
198e5c89e4eSSatish Balay 
199e5c89e4eSSatish Balay   head->filename                 = filename;
200e5c89e4eSSatish Balay   head->functionname             = function;
2010700a824SBarry Smith   head->classid                  = CLASSID_VALUE;
2020700a824SBarry Smith   *(PetscClassId*)(inew + nsize) = CLASSID_VALUE;
203e5c89e4eSSatish Balay 
204e5c89e4eSSatish Balay   TRallocated += nsize;
205a297a907SKarl Rupp   if (TRallocated > TRMaxMem) TRMaxMem = TRallocated;
206e5c89e4eSSatish Balay   TRfrags++;
207e5c89e4eSSatish Balay 
2088bf1f09cSShri Abhyankar #if defined(PETSC_USE_DEBUG)
20976386721SLisandro Dalcin   if (PetscStackActive()) {
2101f46d60fSShri Abhyankar     ierr = PetscStackCopy((PetscStack*)PetscThreadLocalGetValue(petscstack),&head->stack);CHKERRQ(ierr);
2112c9581d2SBarry Smith     /* fix the line number to where the malloc() was called, not the PetscFunctionBegin; */
2122c9581d2SBarry Smith     head->stack.line[head->stack.currentsize-2] = lineno;
21376386721SLisandro Dalcin   }
214e5c89e4eSSatish Balay #endif
215e5c89e4eSSatish Balay 
216e5c89e4eSSatish Balay   /*
217e5c89e4eSSatish Balay          Allow logging of all mallocs made
218e5c89e4eSSatish Balay   */
219574034a9SJed Brown   if (PetscLogMalloc > -1 && PetscLogMalloc < PetscLogMallocMax && a >= PetscLogMallocThreshold) {
220e5c89e4eSSatish Balay     if (!PetscLogMalloc) {
221e5c89e4eSSatish Balay       PetscLogMallocLength = (size_t*)malloc(PetscLogMallocMax*sizeof(size_t));
222e32f2f54SBarry Smith       if (!PetscLogMallocLength) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM," ");
223a297a907SKarl Rupp 
224a2ea699eSBarry Smith       PetscLogMallocFile = (const char**)malloc(PetscLogMallocMax*sizeof(char*));
225e32f2f54SBarry Smith       if (!PetscLogMallocFile) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM," ");
226a297a907SKarl Rupp 
227a2ea699eSBarry Smith       PetscLogMallocFunction = (const char**)malloc(PetscLogMallocMax*sizeof(char*));
228e32f2f54SBarry Smith       if (!PetscLogMallocFunction) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM," ");
229e5c89e4eSSatish Balay     }
230e5c89e4eSSatish Balay     PetscLogMallocLength[PetscLogMalloc]     = nsize;
231e5c89e4eSSatish Balay     PetscLogMallocFile[PetscLogMalloc]       = filename;
232e5c89e4eSSatish Balay     PetscLogMallocFunction[PetscLogMalloc++] = function;
233e5c89e4eSSatish Balay   }
234e5c89e4eSSatish Balay   *result = (void*)inew;
235e5c89e4eSSatish Balay   PetscFunctionReturn(0);
236e5c89e4eSSatish Balay }
237e5c89e4eSSatish Balay 
238e5c89e4eSSatish Balay 
239e5c89e4eSSatish Balay #undef __FUNCT__
240e5c89e4eSSatish Balay #define __FUNCT__ "PetscTrFreeDefault"
241e5c89e4eSSatish Balay /*
242e5c89e4eSSatish Balay    PetscTrFreeDefault - Free with tracing.
243e5c89e4eSSatish Balay 
244e5c89e4eSSatish Balay    Input Parameters:
245e5c89e4eSSatish Balay .   a    - pointer to a block allocated with PetscTrMalloc
246e5c89e4eSSatish Balay .   lineno - line number where used.  Use __LINE__ for this
247e5c89e4eSSatish Balay .   function - function calling routine. Use __FUNCT__ for this
248e5c89e4eSSatish Balay .   file  - file name where used.  Use __FILE__ for this
249e5c89e4eSSatish Balay  */
250*efca3c55SSatish Balay PetscErrorCode  PetscTrFreeDefault(void *aa,int line,const char function[],const char file[])
251e5c89e4eSSatish Balay {
252e5c89e4eSSatish Balay   char           *a = (char*)aa;
253e5c89e4eSSatish Balay   TRSPACE        *head;
254e5c89e4eSSatish Balay   char           *ahead;
255e5c89e4eSSatish Balay   PetscErrorCode ierr;
2560700a824SBarry Smith   PetscClassId   *nend;
257e5c89e4eSSatish Balay 
258e5c89e4eSSatish Balay   PetscFunctionBegin;
259e5c89e4eSSatish Balay   /* Do not try to handle empty blocks */
260e5c89e4eSSatish Balay   if (!a) {
261*efca3c55SSatish Balay     (*PetscErrorPrintf)("PetscTrFreeDefault called from %s() line %d in %s\n",function,line,file);
262*efca3c55SSatish Balay     SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Trying to free null block: Free called from %s() line %d in %s\n",function,line,file);
263e5c89e4eSSatish Balay   }
264e5c89e4eSSatish Balay 
265e5c89e4eSSatish Balay   if (TRdebugLevel) {
266*efca3c55SSatish Balay     ierr = PetscMallocValidate(line,function,file);CHKERRQ(ierr);
267e5c89e4eSSatish Balay   }
268e5c89e4eSSatish Balay 
269e5c89e4eSSatish Balay   ahead = a;
270e5c89e4eSSatish Balay   a     = a - sizeof(TrSPACE);
271e5c89e4eSSatish Balay   head  = (TRSPACE*)a;
272e5c89e4eSSatish Balay 
2730700a824SBarry Smith   if (head->classid != CLASSID_VALUE) {
274*efca3c55SSatish Balay     (*PetscErrorPrintf)("PetscTrFreeDefault() called from %s() line %d in %s\n",function,line,file);
275e5c89e4eSSatish Balay     (*PetscErrorPrintf)("Block at address %p is corrupted; cannot free;\nmay be block not allocated with PetscMalloc()\n",a);
276e32f2f54SBarry Smith     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC,"Bad location or corrupted memory");
277e5c89e4eSSatish Balay   }
2780700a824SBarry Smith   nend = (PetscClassId*)(ahead + head->size);
2790700a824SBarry Smith   if (*nend != CLASSID_VALUE) {
280e5c89e4eSSatish Balay     if (*nend == ALREADY_FREED) {
281*efca3c55SSatish Balay       (*PetscErrorPrintf)("PetscTrFreeDefault() called from %s() line %d in %s\n",function,line,file);
282e5c89e4eSSatish Balay       (*PetscErrorPrintf)("Block [id=%d(%.0f)] at address %p was already freed\n",head->id,(PetscLogDouble)head->size,a + sizeof(TrSPACE));
283e5c89e4eSSatish Balay       if (head->lineno > 0 && head->lineno < 50000 /* sanity check */) {
284*efca3c55SSatish Balay         (*PetscErrorPrintf)("Block freed in %s() line %d in %s\n",head->functionname,head->lineno,head->filename);
285e5c89e4eSSatish Balay       } else {
286*efca3c55SSatish Balay         (*PetscErrorPrintf)("Block allocated in %s() line %d in %s\n",head->functionname,-head->lineno,head->filename);
287e5c89e4eSSatish Balay       }
288e32f2f54SBarry Smith       SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Memory already freed");
289e5c89e4eSSatish Balay     } else {
290e5c89e4eSSatish Balay       /* Damaged tail */
291*efca3c55SSatish Balay       (*PetscErrorPrintf)("PetscTrFreeDefault() called from %s() line %d in %s\n",function,line,file);
292e5c89e4eSSatish Balay       (*PetscErrorPrintf)("Block [id=%d(%.0f)] at address %p is corrupted (probably write past end of array)\n",head->id,(PetscLogDouble)head->size,a);
293*efca3c55SSatish Balay       (*PetscErrorPrintf)("Block allocated in %s() line %d in %s\n",head->functionname,head->lineno,head->filename);
294e32f2f54SBarry Smith       SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC,"Corrupted memory");
295e5c89e4eSSatish Balay     }
296e5c89e4eSSatish Balay   }
297e5c89e4eSSatish Balay   /* Mark the location freed */
298e5c89e4eSSatish Balay   *nend = ALREADY_FREED;
299e5c89e4eSSatish Balay   /* Save location where freed.  If we suspect the line number, mark as  allocated location */
300e5c89e4eSSatish Balay   if (line > 0 && line < 50000) {
301e5c89e4eSSatish Balay     head->lineno       = line;
302e5c89e4eSSatish Balay     head->filename     = file;
303e5c89e4eSSatish Balay     head->functionname = function;
304e5c89e4eSSatish Balay   } else {
305e5c89e4eSSatish Balay     head->lineno = -head->lineno;
306e5c89e4eSSatish Balay   }
307e5c89e4eSSatish Balay   /* zero out memory - helps to find some reuse of already freed memory */
308e5c89e4eSSatish Balay   ierr = PetscMemzero(aa,head->size);CHKERRQ(ierr);
309e5c89e4eSSatish Balay 
310e5c89e4eSSatish Balay   TRallocated -= head->size;
311e5c89e4eSSatish Balay   TRfrags--;
312e5c89e4eSSatish Balay   if (head->prev) head->prev->next = head->next;
313e5c89e4eSSatish Balay   else TRhead = head->next;
314e5c89e4eSSatish Balay 
315e5c89e4eSSatish Balay   if (head->next) head->next->prev = head->prev;
316*efca3c55SSatish Balay   ierr = PetscFreeAlign(a,line,function,file);CHKERRQ(ierr);
317e5c89e4eSSatish Balay   PetscFunctionReturn(0);
318e5c89e4eSSatish Balay }
319e5c89e4eSSatish Balay 
320e5c89e4eSSatish Balay 
321e5c89e4eSSatish Balay #undef __FUNCT__
322e5c89e4eSSatish Balay #define __FUNCT__ "PetscMemoryShowUsage"
323fe7fb379SMatthew Knepley /*@C
324e5c89e4eSSatish Balay     PetscMemoryShowUsage - Shows the amount of memory currently being used
325e5c89e4eSSatish Balay         in a communicator.
326e5c89e4eSSatish Balay 
327e5c89e4eSSatish Balay     Collective on PetscViewer
328e5c89e4eSSatish Balay 
329e5c89e4eSSatish Balay     Input Parameter:
330e5c89e4eSSatish Balay +    viewer - the viewer that defines the communicator
331e5c89e4eSSatish Balay -    message - string printed before values
332e5c89e4eSSatish Balay 
333e5c89e4eSSatish Balay     Level: intermediate
334e5c89e4eSSatish Balay 
335e5c89e4eSSatish Balay     Concepts: memory usage
336e5c89e4eSSatish Balay 
3371bb97394SVictor Eijkhout .seealso: PetscMallocDump(), PetscMemoryGetCurrentUsage()
338e5c89e4eSSatish Balay  @*/
3397087cfbeSBarry Smith PetscErrorCode  PetscMemoryShowUsage(PetscViewer viewer,const char message[])
340e5c89e4eSSatish Balay {
341e5c89e4eSSatish Balay   PetscLogDouble allocated,maximum,resident,residentmax;
342e5c89e4eSSatish Balay   PetscErrorCode ierr;
343e5c89e4eSSatish Balay   PetscMPIInt    rank;
344e5c89e4eSSatish Balay   MPI_Comm       comm;
345e5c89e4eSSatish Balay 
346e5c89e4eSSatish Balay   PetscFunctionBegin;
347e5c89e4eSSatish Balay   if (!viewer) viewer = PETSC_VIEWER_STDOUT_WORLD;
348e5c89e4eSSatish Balay   ierr = PetscMallocGetCurrentUsage(&allocated);CHKERRQ(ierr);
349e5c89e4eSSatish Balay   ierr = PetscMallocGetMaximumUsage(&maximum);CHKERRQ(ierr);
350e5c89e4eSSatish Balay   ierr = PetscMemoryGetCurrentUsage(&resident);CHKERRQ(ierr);
351e5c89e4eSSatish Balay   ierr = PetscMemoryGetMaximumUsage(&residentmax);CHKERRQ(ierr);
352e5c89e4eSSatish Balay   if (residentmax > 0) residentmax = PetscMax(resident,residentmax);
353e5c89e4eSSatish Balay   ierr = PetscObjectGetComm((PetscObject)viewer,&comm);CHKERRQ(ierr);
354e5c89e4eSSatish Balay   ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
355e5c89e4eSSatish Balay   ierr = PetscViewerASCIIPrintf(viewer,message);CHKERRQ(ierr);
3567b23a99aSBarry Smith   ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_TRUE);CHKERRQ(ierr);
357e5c89e4eSSatish Balay   if (resident && residentmax && allocated) {
358e5c89e4eSSatish Balay     ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d]Current space PetscMalloc()ed %g, max space PetscMalloced() %g\n[%d]Current process memory %g max process memory %g\n",rank,allocated,maximum,rank,resident,residentmax);CHKERRQ(ierr);
359e5c89e4eSSatish Balay   } else if (resident && residentmax) {
360e5c89e4eSSatish Balay     ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d]Run with -malloc to get statistics on PetscMalloc() calls\n[%d]Current process memory %g max process memory %g\n",rank,rank,resident,residentmax);CHKERRQ(ierr);
361e5c89e4eSSatish Balay   } else if (resident && allocated) {
362e5c89e4eSSatish Balay     ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d]Current space PetscMalloc()ed %g, max space PetscMalloced() %g\n[%d]Current process memory %g, run with -memory_info to get max memory usage\n",rank,allocated,maximum,rank,resident);CHKERRQ(ierr);
363e5c89e4eSSatish Balay   } else if (allocated) {
364e5c89e4eSSatish Balay     ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d]Current space PetscMalloc()ed %g, max space PetscMalloced() %g\n[%d]OS cannot compute process memory\n",rank,allocated,maximum,rank);CHKERRQ(ierr);
365e5c89e4eSSatish Balay   } else {
366e5c89e4eSSatish Balay     ierr = PetscViewerASCIIPrintf(viewer,"Run with -malloc to get statistics on PetscMalloc() calls\nOS cannot compute process memory\n");CHKERRQ(ierr);
367e5c89e4eSSatish Balay   }
368e5c89e4eSSatish Balay   ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
3697b23a99aSBarry Smith   ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_FALSE);CHKERRQ(ierr);
370e5c89e4eSSatish Balay   PetscFunctionReturn(0);
371e5c89e4eSSatish Balay }
372e5c89e4eSSatish Balay 
373e5c89e4eSSatish Balay #undef __FUNCT__
374e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocGetCurrentUsage"
375e5c89e4eSSatish Balay /*@C
376e5c89e4eSSatish Balay     PetscMallocGetCurrentUsage - gets the current amount of memory used that was PetscMalloc()ed
377e5c89e4eSSatish Balay 
378e5c89e4eSSatish Balay     Not Collective
379e5c89e4eSSatish Balay 
380e5c89e4eSSatish Balay     Output Parameters:
381e5c89e4eSSatish Balay .   space - number of bytes currently allocated
382e5c89e4eSSatish Balay 
383e5c89e4eSSatish Balay     Level: intermediate
384e5c89e4eSSatish Balay 
385e5c89e4eSSatish Balay     Concepts: memory usage
386e5c89e4eSSatish Balay 
387e5c89e4eSSatish Balay .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocGetMaximumUsage(), PetscMemoryGetCurrentUsage(),
388e5c89e4eSSatish Balay           PetscMemoryGetMaximumUsage()
389e5c89e4eSSatish Balay  @*/
3907087cfbeSBarry Smith PetscErrorCode  PetscMallocGetCurrentUsage(PetscLogDouble *space)
391e5c89e4eSSatish Balay {
392e5c89e4eSSatish Balay   PetscFunctionBegin;
393e5c89e4eSSatish Balay   *space = (PetscLogDouble) TRallocated;
394e5c89e4eSSatish Balay   PetscFunctionReturn(0);
395e5c89e4eSSatish Balay }
396e5c89e4eSSatish Balay 
397e5c89e4eSSatish Balay #undef __FUNCT__
398e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocGetMaximumUsage"
399e5c89e4eSSatish Balay /*@C
400e5c89e4eSSatish Balay     PetscMallocGetMaximumUsage - gets the maximum amount of memory used that was PetscMalloc()ed at any time
401e5c89e4eSSatish Balay         during this run.
402e5c89e4eSSatish Balay 
403e5c89e4eSSatish Balay     Not Collective
404e5c89e4eSSatish Balay 
405e5c89e4eSSatish Balay     Output Parameters:
406e5c89e4eSSatish Balay .   space - maximum number of bytes ever allocated at one time
407e5c89e4eSSatish Balay 
408e5c89e4eSSatish Balay     Level: intermediate
409e5c89e4eSSatish Balay 
410e5c89e4eSSatish Balay     Concepts: memory usage
411e5c89e4eSSatish Balay 
412e5c89e4eSSatish Balay .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocGetMaximumUsage(), PetscMemoryGetCurrentUsage(),
413e5c89e4eSSatish Balay           PetscMemoryGetCurrentUsage()
414e5c89e4eSSatish Balay  @*/
4157087cfbeSBarry Smith PetscErrorCode  PetscMallocGetMaximumUsage(PetscLogDouble *space)
416e5c89e4eSSatish Balay {
417e5c89e4eSSatish Balay   PetscFunctionBegin;
418e5c89e4eSSatish Balay   *space = (PetscLogDouble) TRMaxMem;
419e5c89e4eSSatish Balay   PetscFunctionReturn(0);
420e5c89e4eSSatish Balay }
421e5c89e4eSSatish Balay 
422a64a8e02SBarry Smith #if defined(PETSC_USE_DEBUG)
423a64a8e02SBarry Smith #undef __FUNCT__
424a64a8e02SBarry Smith #define __FUNCT__ "PetscMallocGetStack"
425a64a8e02SBarry Smith /*@C
426a64a8e02SBarry Smith    PetscMallocGetStack - returns a pointer to the stack for the location in the program a call to PetscMalloc() was used to obtain that memory
427a64a8e02SBarry Smith 
428a64a8e02SBarry Smith    Collective on PETSC_COMM_WORLD
429a64a8e02SBarry Smith 
430a64a8e02SBarry Smith    Input Parameter:
431a64a8e02SBarry Smith .    ptr - the memory location
432a64a8e02SBarry Smith 
433a64a8e02SBarry Smith    Output Paramter:
434a64a8e02SBarry Smith .    stack - the stack indicating where the program allocated this memory
435a64a8e02SBarry Smith 
436a64a8e02SBarry Smith    Level: intermediate
437a64a8e02SBarry Smith 
438a64a8e02SBarry Smith .seealso:  PetscMallocGetCurrentUsage(), PetscMallocDumpLog()
439a64a8e02SBarry Smith @*/
440a64a8e02SBarry Smith PetscErrorCode  PetscMallocGetStack(void *ptr,PetscStack **stack)
441a64a8e02SBarry Smith {
442a64a8e02SBarry Smith   TRSPACE *head;
443a64a8e02SBarry Smith 
444a64a8e02SBarry Smith   PetscFunctionBegin;
445a64a8e02SBarry Smith   head   = (TRSPACE*) (((char*)ptr) - HEADER_BYTES);
446a64a8e02SBarry Smith   *stack = &head->stack;
447a64a8e02SBarry Smith   PetscFunctionReturn(0);
448a64a8e02SBarry Smith }
44976386721SLisandro Dalcin #else
45076386721SLisandro Dalcin #undef __FUNCT__
45176386721SLisandro Dalcin #define __FUNCT__ "PetscMallocGetStack"
45276386721SLisandro Dalcin PetscErrorCode  PetscMallocGetStack(void *ptr,void **stack)
45376386721SLisandro Dalcin {
45476386721SLisandro Dalcin   PetscFunctionBegin;
45576386721SLisandro Dalcin   *stack = 0;
45676386721SLisandro Dalcin   PetscFunctionReturn(0);
45776386721SLisandro Dalcin }
458a64a8e02SBarry Smith #endif
459a64a8e02SBarry Smith 
460e5c89e4eSSatish Balay #undef __FUNCT__
461e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocDump"
462e5c89e4eSSatish Balay /*@C
463e5c89e4eSSatish Balay    PetscMallocDump - Dumps the allocated memory blocks to a file. The information
464e5c89e4eSSatish Balay    printed is: size of space (in bytes), address of space, id of space,
465e5c89e4eSSatish Balay    file in which space was allocated, and line number at which it was
466e5c89e4eSSatish Balay    allocated.
467e5c89e4eSSatish Balay 
468e5c89e4eSSatish Balay    Collective on PETSC_COMM_WORLD
469e5c89e4eSSatish Balay 
470e5c89e4eSSatish Balay    Input Parameter:
471e5c89e4eSSatish Balay .  fp  - file pointer.  If fp is NULL, stdout is assumed.
472e5c89e4eSSatish Balay 
473e5c89e4eSSatish Balay    Options Database Key:
474e5c89e4eSSatish Balay .  -malloc_dump - Dumps unfreed memory during call to PetscFinalize()
475e5c89e4eSSatish Balay 
476e5c89e4eSSatish Balay    Level: intermediate
477e5c89e4eSSatish Balay 
478e5c89e4eSSatish Balay    Fortran Note:
479e5c89e4eSSatish Balay    The calling sequence in Fortran is PetscMallocDump(integer ierr)
480e5c89e4eSSatish Balay    The fp defaults to stdout.
481e5c89e4eSSatish Balay 
482e5c89e4eSSatish Balay    Notes: uses MPI_COMM_WORLD, because this may be called in PetscFinalize() after PETSC_COMM_WORLD
483e5c89e4eSSatish Balay           has been freed.
484e5c89e4eSSatish Balay 
485e5c89e4eSSatish Balay    Concepts: memory usage
486e5c89e4eSSatish Balay    Concepts: memory bleeding
487e5c89e4eSSatish Balay    Concepts: bleeding memory
488e5c89e4eSSatish Balay 
4899e9a1f8fSvictor .seealso:  PetscMallocGetCurrentUsage(), PetscMallocDumpLog()
490e5c89e4eSSatish Balay @*/
4917087cfbeSBarry Smith PetscErrorCode  PetscMallocDump(FILE *fp)
492e5c89e4eSSatish Balay {
493e5c89e4eSSatish Balay   TRSPACE        *head;
494e5c89e4eSSatish Balay   PetscErrorCode ierr;
495e5c89e4eSSatish Balay   PetscMPIInt    rank;
496e5c89e4eSSatish Balay 
497e5c89e4eSSatish Balay   PetscFunctionBegin;
498e5c89e4eSSatish Balay   ierr = MPI_Comm_rank(MPI_COMM_WORLD,&rank);CHKERRQ(ierr);
499da9f1d6bSBarry Smith   if (!fp) fp = PETSC_STDOUT;
500a297a907SKarl Rupp   if (TRallocated > 0) fprintf(fp,"[%d]Total space allocated %.0f bytes\n",rank,(PetscLogDouble)TRallocated);
501e5c89e4eSSatish Balay   head = TRhead;
502e5c89e4eSSatish Balay   while (head) {
503*efca3c55SSatish Balay     fprintf(fp,"[%2d]%.0f bytes %s() line %d in %s\n",rank,(PetscLogDouble)head->size,head->functionname,head->lineno,head->filename);
5048bf1f09cSShri Abhyankar #if defined(PETSC_USE_DEBUG)
505e5c89e4eSSatish Balay     ierr = PetscStackPrint(&head->stack,fp);CHKERRQ(ierr);
506e5c89e4eSSatish Balay #endif
507e5c89e4eSSatish Balay     head = head->next;
508e5c89e4eSSatish Balay   }
509e5c89e4eSSatish Balay   PetscFunctionReturn(0);
510e5c89e4eSSatish Balay }
511e5c89e4eSSatish Balay 
512e5c89e4eSSatish Balay /* ---------------------------------------------------------------------------- */
513e5c89e4eSSatish Balay 
514e5c89e4eSSatish Balay #undef __FUNCT__
515e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocSetDumpLog"
516e5c89e4eSSatish Balay /*@C
517e5c89e4eSSatish Balay     PetscMallocSetDumpLog - Activates logging of all calls to PetscMalloc().
518e5c89e4eSSatish Balay 
519e5c89e4eSSatish Balay     Not Collective
520e5c89e4eSSatish Balay 
521e5c89e4eSSatish Balay     Options Database Key:
522574034a9SJed Brown +  -malloc_log <filename> - Activates PetscMallocDumpLog()
523574034a9SJed Brown -  -malloc_log_threshold <min> - Activates logging and sets a minimum size
524e5c89e4eSSatish Balay 
525e5c89e4eSSatish Balay     Level: advanced
526e5c89e4eSSatish Balay 
527574034a9SJed Brown .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocSetDumpLogThreshold()
528e5c89e4eSSatish Balay @*/
5297087cfbeSBarry Smith PetscErrorCode PetscMallocSetDumpLog(void)
530e5c89e4eSSatish Balay {
53121b680ceSJed Brown   PetscErrorCode ierr;
53221b680ceSJed Brown 
533e5c89e4eSSatish Balay   PetscFunctionBegin;
534e5c89e4eSSatish Balay   PetscLogMalloc = 0;
535a297a907SKarl Rupp 
53621b680ceSJed Brown   ierr = PetscMemorySetGetMaximumUsage();CHKERRQ(ierr);
537e5c89e4eSSatish Balay   PetscFunctionReturn(0);
538e5c89e4eSSatish Balay }
539e5c89e4eSSatish Balay 
540e5c89e4eSSatish Balay #undef __FUNCT__
541574034a9SJed Brown #define __FUNCT__ "PetscMallocSetDumpLogThreshold"
542574034a9SJed Brown /*@C
543574034a9SJed Brown     PetscMallocSetDumpLogThreshold - Activates logging of all calls to PetscMalloc().
544574034a9SJed Brown 
545574034a9SJed Brown     Not Collective
546574034a9SJed Brown 
547574034a9SJed Brown     Input Arguments:
548574034a9SJed Brown .   logmin - minimum allocation size to log, or PETSC_DEFAULT
549574034a9SJed Brown 
550574034a9SJed Brown     Options Database Key:
551574034a9SJed Brown +  -malloc_log <filename> - Activates PetscMallocDumpLog()
552574034a9SJed Brown -  -malloc_log_threshold <min> - Activates logging and sets a minimum size
553574034a9SJed Brown 
554574034a9SJed Brown     Level: advanced
555574034a9SJed Brown 
556574034a9SJed Brown .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocSetDumpLog()
557574034a9SJed Brown @*/
558574034a9SJed Brown PetscErrorCode PetscMallocSetDumpLogThreshold(PetscLogDouble logmin)
559574034a9SJed Brown {
560574034a9SJed Brown   PetscErrorCode ierr;
561574034a9SJed Brown 
562574034a9SJed Brown   PetscFunctionBegin;
563574034a9SJed Brown   ierr = PetscMallocSetDumpLog();CHKERRQ(ierr);
564574034a9SJed Brown   if (logmin < 0) logmin = 0.0; /* PETSC_DEFAULT or PETSC_DECIDE */
565574034a9SJed Brown   PetscLogMallocThreshold = (size_t)logmin;
566574034a9SJed Brown   PetscFunctionReturn(0);
567574034a9SJed Brown }
568574034a9SJed Brown 
569574034a9SJed Brown #undef __FUNCT__
57018a2528dSJed Brown #define __FUNCT__ "PetscMallocGetDumpLog"
57118a2528dSJed Brown /*@C
57218a2528dSJed Brown     PetscMallocGetDumpLog - Determine whether all calls to PetscMalloc() are being logged
57318a2528dSJed Brown 
57418a2528dSJed Brown     Not Collective
57518a2528dSJed Brown 
57618a2528dSJed Brown     Output Arguments
57718a2528dSJed Brown .   logging - PETSC_TRUE if logging is active
57818a2528dSJed Brown 
57918a2528dSJed Brown     Options Database Key:
58018a2528dSJed Brown .  -malloc_log - Activates PetscMallocDumpLog()
58118a2528dSJed Brown 
58218a2528dSJed Brown     Level: advanced
58318a2528dSJed Brown 
58418a2528dSJed Brown .seealso: PetscMallocDump(), PetscMallocDumpLog()
58518a2528dSJed Brown @*/
58618a2528dSJed Brown PetscErrorCode PetscMallocGetDumpLog(PetscBool *logging)
58718a2528dSJed Brown {
58818a2528dSJed Brown 
58918a2528dSJed Brown   PetscFunctionBegin;
59018a2528dSJed Brown   *logging = (PetscBool)(PetscLogMalloc >= 0);
59118a2528dSJed Brown   PetscFunctionReturn(0);
59218a2528dSJed Brown }
59318a2528dSJed Brown 
59418a2528dSJed Brown #undef __FUNCT__
595e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocDumpLog"
596e5c89e4eSSatish Balay /*@C
597e5c89e4eSSatish Balay     PetscMallocDumpLog - Dumps the log of all calls to PetscMalloc(); also calls
59821b680ceSJed Brown        PetscMemoryGetMaximumUsage()
599e5c89e4eSSatish Balay 
600e5c89e4eSSatish Balay     Collective on PETSC_COMM_WORLD
601e5c89e4eSSatish Balay 
602e5c89e4eSSatish Balay     Input Parameter:
6030298fd71SBarry Smith .   fp - file pointer; or NULL
604e5c89e4eSSatish Balay 
605e5c89e4eSSatish Balay     Options Database Key:
606e5c89e4eSSatish Balay .  -malloc_log - Activates PetscMallocDumpLog()
607e5c89e4eSSatish Balay 
608e5c89e4eSSatish Balay     Level: advanced
609e5c89e4eSSatish Balay 
610e5c89e4eSSatish Balay    Fortran Note:
611e5c89e4eSSatish Balay    The calling sequence in Fortran is PetscMallocDumpLog(integer ierr)
612e5c89e4eSSatish Balay    The fp defaults to stdout.
613e5c89e4eSSatish Balay 
614e5c89e4eSSatish Balay .seealso: PetscMallocGetCurrentUsage(), PetscMallocDump(), PetscMallocSetDumpLog()
615e5c89e4eSSatish Balay @*/
6167087cfbeSBarry Smith PetscErrorCode  PetscMallocDumpLog(FILE *fp)
617e5c89e4eSSatish Balay {
618e5c89e4eSSatish Balay   PetscInt       i,j,n,dummy,*perm;
619e5c89e4eSSatish Balay   size_t         *shortlength;
620f56c2debSBarry Smith   int            *shortcount,err;
621e5c89e4eSSatish Balay   PetscMPIInt    rank,size,tag = 1212 /* very bad programming */;
622ace3abfcSBarry Smith   PetscBool      match;
623e5c89e4eSSatish Balay   const char     **shortfunction;
624e5c89e4eSSatish Balay   PetscLogDouble rss;
625e5c89e4eSSatish Balay   MPI_Status     status;
626e5c89e4eSSatish Balay   PetscErrorCode ierr;
627e5c89e4eSSatish Balay 
628e5c89e4eSSatish Balay   PetscFunctionBegin;
629e5c89e4eSSatish Balay   ierr = MPI_Comm_rank(MPI_COMM_WORLD,&rank);CHKERRQ(ierr);
630e5c89e4eSSatish Balay   ierr = MPI_Comm_size(MPI_COMM_WORLD,&size);CHKERRQ(ierr);
631e5c89e4eSSatish Balay   /*
632e5c89e4eSSatish Balay        Try to get the data printed in order by processor. This will only sometimes work
633e5c89e4eSSatish Balay   */
634f56c2debSBarry Smith   err = fflush(fp);
635e32f2f54SBarry Smith   if (err) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SYS,"fflush() failed on file");
636f56c2debSBarry Smith 
637e5c89e4eSSatish Balay   ierr = MPI_Barrier(MPI_COMM_WORLD);CHKERRQ(ierr);
638e5c89e4eSSatish Balay   if (rank) {
639e5c89e4eSSatish Balay     ierr = MPI_Recv(&dummy,1,MPIU_INT,rank-1,tag,MPI_COMM_WORLD,&status);CHKERRQ(ierr);
640e5c89e4eSSatish Balay   }
641e5c89e4eSSatish Balay 
642768aa557SSatish Balay   if (PetscLogMalloc < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"PetscMallocDumpLog() called without call to PetscMallocSetDumpLog() this is often due to\n                      setting the option -malloc_log AFTER PetscInitialize() with PetscOptionsInsert() or PetscOptionsInsertFile()");
643768aa557SSatish Balay 
644da9f1d6bSBarry Smith   if (!fp) fp = PETSC_STDOUT;
645f3d65365SJed Brown   ierr = PetscMemoryGetMaximumUsage(&rss);CHKERRQ(ierr);
646e5c89e4eSSatish Balay   if (rss) {
647f3d65365SJed Brown     ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] Maximum memory PetscMalloc()ed %.0f maximum size of entire process %.0f\n",rank,(PetscLogDouble)TRMaxMem,rss);CHKERRQ(ierr);
648e5c89e4eSSatish Balay   } else {
649e5c89e4eSSatish Balay     ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] Maximum memory PetscMalloc()ed %.0f OS cannot compute size of entire process\n",rank,(PetscLogDouble)TRMaxMem);CHKERRQ(ierr);
650e5c89e4eSSatish Balay   }
651e32f2f54SBarry Smith   shortcount    = (int*)malloc(PetscLogMalloc*sizeof(int));if (!shortcount) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory");
652e32f2f54SBarry Smith   shortlength   = (size_t*)malloc(PetscLogMalloc*sizeof(size_t));if (!shortlength) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory");
653e32f2f54SBarry Smith   shortfunction = (const char**)malloc(PetscLogMalloc*sizeof(char*));if (!shortfunction) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory");
65497b9d747SJed Brown   for (i=0,n=0; i<PetscLogMalloc; i++) {
655e5c89e4eSSatish Balay     for (j=0; j<n; j++) {
656e5c89e4eSSatish Balay       ierr = PetscStrcmp(shortfunction[j],PetscLogMallocFunction[i],&match);CHKERRQ(ierr);
657e5c89e4eSSatish Balay       if (match) {
658e5c89e4eSSatish Balay         shortlength[j] += PetscLogMallocLength[i];
65959ffdab8SBarry Smith         shortcount[j]++;
660e5c89e4eSSatish Balay         goto foundit;
661e5c89e4eSSatish Balay       }
662e5c89e4eSSatish Balay     }
663e5c89e4eSSatish Balay     shortfunction[n] = PetscLogMallocFunction[i];
664e5c89e4eSSatish Balay     shortlength[n]   = PetscLogMallocLength[i];
66559ffdab8SBarry Smith     shortcount[n]    = 1;
666e5c89e4eSSatish Balay     n++;
667e5c89e4eSSatish Balay foundit:;
668e5c89e4eSSatish Balay   }
669e5c89e4eSSatish Balay 
670e32f2f54SBarry Smith   perm = (PetscInt*)malloc(n*sizeof(PetscInt));if (!perm) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory");
671e5c89e4eSSatish Balay   for (i=0; i<n; i++) perm[i] = i;
672e5c89e4eSSatish Balay   ierr = PetscSortStrWithPermutation(n,(const char**)shortfunction,perm);CHKERRQ(ierr);
673e5c89e4eSSatish Balay 
674e5c89e4eSSatish Balay   ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] Memory usage sorted by function\n",rank);CHKERRQ(ierr);
675e5c89e4eSSatish Balay   for (i=0; i<n; i++) {
67659ffdab8SBarry Smith     ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] %d %.0f %s()\n",rank,shortcount[perm[i]],(PetscLogDouble)shortlength[perm[i]],shortfunction[perm[i]]);CHKERRQ(ierr);
677e5c89e4eSSatish Balay   }
678e5c89e4eSSatish Balay   free(perm);
679e5c89e4eSSatish Balay   free(shortlength);
68059ffdab8SBarry Smith   free(shortcount);
681e5c89e4eSSatish Balay   free((char**)shortfunction);
682f56c2debSBarry Smith   err = fflush(fp);
683e32f2f54SBarry Smith   if (err) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SYS,"fflush() failed on file");
684e5c89e4eSSatish Balay   if (rank != size-1) {
685e5c89e4eSSatish Balay     ierr = MPI_Send(&dummy,1,MPIU_INT,rank+1,tag,MPI_COMM_WORLD);CHKERRQ(ierr);
686e5c89e4eSSatish Balay   }
687e5c89e4eSSatish Balay   PetscFunctionReturn(0);
688e5c89e4eSSatish Balay }
689e5c89e4eSSatish Balay 
690e5c89e4eSSatish Balay /* ---------------------------------------------------------------------------- */
691e5c89e4eSSatish Balay 
692e5c89e4eSSatish Balay #undef __FUNCT__
693e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocDebug"
694e5c89e4eSSatish Balay /*@C
695e5c89e4eSSatish Balay     PetscMallocDebug - Turns on/off debugging for the memory management routines.
696e5c89e4eSSatish Balay 
697e5c89e4eSSatish Balay     Not Collective
698e5c89e4eSSatish Balay 
699e5c89e4eSSatish Balay     Input Parameter:
700e5c89e4eSSatish Balay .   level - PETSC_TRUE or PETSC_FALSE
701e5c89e4eSSatish Balay 
702e5c89e4eSSatish Balay    Level: intermediate
703e5c89e4eSSatish Balay 
704e5c89e4eSSatish Balay .seealso: CHKMEMQ(), PetscMallocValidate()
705e5c89e4eSSatish Balay @*/
7067087cfbeSBarry Smith PetscErrorCode  PetscMallocDebug(PetscBool level)
707e5c89e4eSSatish Balay {
708e5c89e4eSSatish Balay   PetscFunctionBegin;
709e5c89e4eSSatish Balay   TRdebugLevel = level;
710e5c89e4eSSatish Balay   PetscFunctionReturn(0);
711e5c89e4eSSatish Balay }
7120acecf5bSBarry Smith 
7130acecf5bSBarry Smith #undef __FUNCT__
7140acecf5bSBarry Smith #define __FUNCT__ "PetscMallocGetDebug"
7150acecf5bSBarry Smith /*@C
7160acecf5bSBarry Smith     PetscMallocGetDebug - Indicates if any PETSc is doing ANY memory debugging.
7170acecf5bSBarry Smith 
7180acecf5bSBarry Smith     Not Collective
7190acecf5bSBarry Smith 
7200acecf5bSBarry Smith     Output Parameter:
7210acecf5bSBarry Smith .    flg - PETSC_TRUE if any debugger
7220acecf5bSBarry Smith 
7230acecf5bSBarry Smith    Level: intermediate
7240acecf5bSBarry Smith 
7250acecf5bSBarry Smith     Note that by default, the debug version always does some debugging unless you run with -malloc no
7260acecf5bSBarry Smith 
7270acecf5bSBarry Smith 
7280acecf5bSBarry Smith .seealso: CHKMEMQ(), PetscMallocValidate()
7290acecf5bSBarry Smith @*/
7300acecf5bSBarry Smith PetscErrorCode  PetscMallocGetDebug(PetscBool *flg)
7310acecf5bSBarry Smith {
7320acecf5bSBarry Smith   PetscFunctionBegin;
7330acecf5bSBarry Smith   if (PetscTrMalloc == PetscTrMallocDefault) *flg = PETSC_TRUE;
7340acecf5bSBarry Smith   else *flg = PETSC_FALSE;
7350acecf5bSBarry Smith   PetscFunctionReturn(0);
7360acecf5bSBarry Smith }
737