1e5c89e4eSSatish Balay #define PETSC_DLL 2e5c89e4eSSatish Balay /* 3e5c89e4eSSatish Balay 4e5c89e4eSSatish Balay This file defines part of the initialization of PETSc 5e5c89e4eSSatish Balay 6e5c89e4eSSatish Balay This file uses regular malloc and free because it cannot know 7e5c89e4eSSatish Balay what malloc is being used until it has already processed the input. 8e5c89e4eSSatish Balay */ 9e5c89e4eSSatish Balay 10e5c89e4eSSatish Balay #include "petsc.h" /*I "petsc.h" I*/ 11e5c89e4eSSatish Balay #include "petscsys.h" 12e5c89e4eSSatish Balay #if defined(PETSC_HAVE_STDLIB_H) 13e5c89e4eSSatish Balay #include <stdlib.h> 14e5c89e4eSSatish Balay #endif 15e5c89e4eSSatish Balay #if defined(PETSC_HAVE_MALLOC_H) 16e5c89e4eSSatish Balay #include <malloc.h> 17e5c89e4eSSatish Balay #endif 18e5c89e4eSSatish Balay #include "petscfix.h" 196dc8fec2Sbcordonn #include "zope.h" 20e5c89e4eSSatish Balay /* ------------------------Nasty global variables -------------------------------*/ 21e5c89e4eSSatish Balay /* 22e5c89e4eSSatish Balay Indicates if PETSc started up MPI, or it was 23e5c89e4eSSatish Balay already started before PETSc was initialized. 24e5c89e4eSSatish Balay */ 25e5c89e4eSSatish Balay PetscTruth PETSC_DLLEXPORT PetscBeganMPI = PETSC_FALSE; 26e5c89e4eSSatish Balay PetscTruth PETSC_DLLEXPORT PetscInitializeCalled = PETSC_FALSE; 27e5c89e4eSSatish Balay PetscTruth PETSC_DLLEXPORT PetscFinalizeCalled = PETSC_FALSE; 28e5c89e4eSSatish Balay PetscMPIInt PETSC_DLLEXPORT PetscGlobalRank = -1; 29e5c89e4eSSatish Balay PetscMPIInt PETSC_DLLEXPORT PetscGlobalSize = -1; 30e5c89e4eSSatish Balay 31e5c89e4eSSatish Balay #if defined(PETSC_USE_COMPLEX) 32e5c89e4eSSatish Balay #if defined(PETSC_COMPLEX_INSTANTIATE) 33e5c89e4eSSatish Balay template <> class std::complex<double>; /* instantiate complex template class */ 34e5c89e4eSSatish Balay #endif 35e5c89e4eSSatish Balay MPI_Datatype PETSC_DLLEXPORT MPIU_COMPLEX; 36e5c89e4eSSatish Balay PetscScalar PETSC_DLLEXPORT PETSC_i; 37e5c89e4eSSatish Balay #else 38e5c89e4eSSatish Balay PetscScalar PETSC_DLLEXPORT PETSC_i = 0.0; 39e5c89e4eSSatish Balay #endif 40e5c89e4eSSatish Balay MPI_Datatype PETSC_DLLEXPORT MPIU_2SCALAR = 0; 41e5c89e4eSSatish Balay MPI_Datatype PETSC_DLLEXPORT MPIU_2INT = 0; 42e5c89e4eSSatish Balay /* 43e5c89e4eSSatish Balay These are needed by petscbt.h 44e5c89e4eSSatish Balay */ 45421d60dfSSatish Balay #include "petscbt.h" 46e5c89e4eSSatish Balay char PETSC_DLLEXPORT _BT_mask = ' '; 47e5c89e4eSSatish Balay char PETSC_DLLEXPORT _BT_c = ' '; 48e5c89e4eSSatish Balay PetscInt PETSC_DLLEXPORT _BT_idx = 0; 49e5c89e4eSSatish Balay 50e5c89e4eSSatish Balay /* 51e5c89e4eSSatish Balay Function that is called to display all error messages 52e5c89e4eSSatish Balay */ 53e5c89e4eSSatish Balay PetscErrorCode PETSC_DLLEXPORT (*PetscErrorPrintf)(const char [],...) = PetscErrorPrintfDefault; 54e5c89e4eSSatish Balay PetscErrorCode PETSC_DLLEXPORT (*PetscHelpPrintf)(MPI_Comm,const char [],...) = PetscHelpPrintfDefault; 551179db26SBarry Smith PetscErrorCode PETSC_DLLEXPORT (*PetscVFPrintf)(FILE*,const char[],va_list) = PetscVFPrintfDefault; 56e5c89e4eSSatish Balay 57e5c89e4eSSatish Balay /* ------------------------------------------------------------------------------*/ 58e5c89e4eSSatish Balay /* 59e5c89e4eSSatish Balay Optional file where all PETSc output from various prints is saved 60e5c89e4eSSatish Balay */ 61e5c89e4eSSatish Balay FILE *petsc_history = PETSC_NULL; 62e5c89e4eSSatish Balay 63e5c89e4eSSatish Balay #undef __FUNCT__ 64e5c89e4eSSatish Balay #define __FUNCT__ "PetscLogOpenHistoryFile" 65e5c89e4eSSatish Balay PetscErrorCode PETSC_DLLEXPORT PetscLogOpenHistoryFile(const char filename[],FILE **fd) 66e5c89e4eSSatish Balay { 67e5c89e4eSSatish Balay PetscErrorCode ierr; 68e5c89e4eSSatish Balay PetscMPIInt rank,size; 69e5c89e4eSSatish Balay char pfile[PETSC_MAX_PATH_LEN],pname[PETSC_MAX_PATH_LEN],fname[PETSC_MAX_PATH_LEN],date[64]; 70e5c89e4eSSatish Balay char version[256]; 71e5c89e4eSSatish Balay 72e5c89e4eSSatish Balay PetscFunctionBegin; 73e5c89e4eSSatish Balay ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr); 74e5c89e4eSSatish Balay if (!rank) { 75e5c89e4eSSatish Balay char arch[10]; 76f56c2debSBarry Smith int err; 77f56c2debSBarry Smith 78e5c89e4eSSatish Balay ierr = PetscGetArchType(arch,10);CHKERRQ(ierr); 79e5c89e4eSSatish Balay ierr = PetscGetDate(date,64);CHKERRQ(ierr); 80a523d312SBarry Smith ierr = PetscGetVersion(version,256);CHKERRQ(ierr); 81e5c89e4eSSatish Balay ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRQ(ierr); 82e5c89e4eSSatish Balay if (filename) { 83e5c89e4eSSatish Balay ierr = PetscFixFilename(filename,fname);CHKERRQ(ierr); 84e5c89e4eSSatish Balay } else { 85e5c89e4eSSatish Balay ierr = PetscGetHomeDirectory(pfile,240);CHKERRQ(ierr); 86e5c89e4eSSatish Balay ierr = PetscStrcat(pfile,"/.petschistory");CHKERRQ(ierr); 87e5c89e4eSSatish Balay ierr = PetscFixFilename(pfile,fname);CHKERRQ(ierr); 88e5c89e4eSSatish Balay } 89e5c89e4eSSatish Balay 90e5c89e4eSSatish Balay *fd = fopen(fname,"a"); if (!fd) SETERRQ1(PETSC_ERR_FILE_OPEN,"Cannot open file: %s",fname); 91e5c89e4eSSatish Balay ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"---------------------------------------------------------\n");CHKERRQ(ierr); 92e5c89e4eSSatish Balay ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"%s %s\n",version,date);CHKERRQ(ierr); 93e5c89e4eSSatish Balay ierr = PetscGetProgramName(pname,PETSC_MAX_PATH_LEN);CHKERRQ(ierr); 94e5c89e4eSSatish Balay ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"%s on a %s, %d proc. with options:\n",pname,arch,size);CHKERRQ(ierr); 95e5c89e4eSSatish Balay ierr = PetscOptionsPrint(*fd);CHKERRQ(ierr); 96e5c89e4eSSatish Balay ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"---------------------------------------------------------\n");CHKERRQ(ierr); 97f56c2debSBarry Smith err = fflush(*fd); 98f56c2debSBarry Smith if (err) SETERRQ(PETSC_ERR_SYS,"fflush() failed on file"); 99e5c89e4eSSatish Balay } 100e5c89e4eSSatish Balay PetscFunctionReturn(0); 101e5c89e4eSSatish Balay } 102e5c89e4eSSatish Balay 103e5c89e4eSSatish Balay #undef __FUNCT__ 104e5c89e4eSSatish Balay #define __FUNCT__ "PetscLogCloseHistoryFile" 105e5c89e4eSSatish Balay PetscErrorCode PETSC_DLLEXPORT PetscLogCloseHistoryFile(FILE **fd) 106e5c89e4eSSatish Balay { 107e5c89e4eSSatish Balay PetscErrorCode ierr; 108e5c89e4eSSatish Balay PetscMPIInt rank; 109e5c89e4eSSatish Balay char date[64]; 110f56c2debSBarry Smith int err; 111e5c89e4eSSatish Balay 112e5c89e4eSSatish Balay PetscFunctionBegin; 113e5c89e4eSSatish Balay ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr); 114e5c89e4eSSatish Balay if (!rank) { 115e5c89e4eSSatish Balay ierr = PetscGetDate(date,64);CHKERRQ(ierr); 116e5c89e4eSSatish Balay ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"---------------------------------------------------------\n");CHKERRQ(ierr); 117e5c89e4eSSatish Balay ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"Finished at %s\n",date);CHKERRQ(ierr); 118e5c89e4eSSatish Balay ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"---------------------------------------------------------\n");CHKERRQ(ierr); 119f56c2debSBarry Smith err = fflush(*fd); 120f56c2debSBarry Smith if (err) SETERRQ(PETSC_ERR_SYS,"fflush() failed on file"); 121f56c2debSBarry Smith err = fclose(*fd); 122f56c2debSBarry Smith if (err) SETERRQ(PETSC_ERR_SYS,"fclose() failed on file"); 123e5c89e4eSSatish Balay } 124e5c89e4eSSatish Balay PetscFunctionReturn(0); 125e5c89e4eSSatish Balay } 126e5c89e4eSSatish Balay 127e5c89e4eSSatish Balay /* ------------------------------------------------------------------------------*/ 128e5c89e4eSSatish Balay 129e5c89e4eSSatish Balay /* 130e5c89e4eSSatish Balay This is ugly and probably belongs somewhere else, but I want to 131e5c89e4eSSatish Balay be able to put a true MPI abort error handler with command line args. 132e5c89e4eSSatish Balay 133e5c89e4eSSatish Balay This is so MPI errors in the debugger will leave all the stack 134e5c89e4eSSatish Balay frames. The default abort cleans up and exits. 135e5c89e4eSSatish Balay */ 136e5c89e4eSSatish Balay 137e5c89e4eSSatish Balay #undef __FUNCT__ 138e5c89e4eSSatish Balay #define __FUNCT__ "Petsc_MPI_AbortOnError" 139e5c89e4eSSatish Balay void Petsc_MPI_AbortOnError(MPI_Comm *comm,PetscMPIInt *flag) 140e5c89e4eSSatish Balay { 141e5c89e4eSSatish Balay PetscFunctionBegin; 142e5c89e4eSSatish Balay (*PetscErrorPrintf)("MPI error %d\n",(int)*flag); 143e5c89e4eSSatish Balay abort(); 144e5c89e4eSSatish Balay } 145e5c89e4eSSatish Balay 146e5c89e4eSSatish Balay #undef __FUNCT__ 147e5c89e4eSSatish Balay #define __FUNCT__ "Petsc_MPI_DebuggerOnError" 148e5c89e4eSSatish Balay void Petsc_MPI_DebuggerOnError(MPI_Comm *comm,PetscMPIInt *flag) 149e5c89e4eSSatish Balay { 150e5c89e4eSSatish Balay PetscErrorCode ierr; 151e5c89e4eSSatish Balay 152e5c89e4eSSatish Balay PetscFunctionBegin; 153e5c89e4eSSatish Balay (*PetscErrorPrintf)("MPI error %d\n",(int)*flag); 154e5c89e4eSSatish Balay ierr = PetscAttachDebugger(); 155e5c89e4eSSatish Balay if (ierr) { /* hopeless so get out */ 156e5c89e4eSSatish Balay MPI_Finalize(); 157e5c89e4eSSatish Balay exit(*flag); 158e5c89e4eSSatish Balay } 159e5c89e4eSSatish Balay } 160e5c89e4eSSatish Balay 161e5c89e4eSSatish Balay #undef __FUNCT__ 162e5c89e4eSSatish Balay #define __FUNCT__ "PetscEnd" 163e5c89e4eSSatish Balay /*@C 164e5c89e4eSSatish Balay PetscEnd - Calls PetscFinalize() and then ends the program. This is useful if one 165e5c89e4eSSatish Balay wishes a clean exit somewhere deep in the program. 166e5c89e4eSSatish Balay 167e5c89e4eSSatish Balay Collective on PETSC_COMM_WORLD 168e5c89e4eSSatish Balay 169e5c89e4eSSatish Balay Options Database Keys are the same as for PetscFinalize() 170e5c89e4eSSatish Balay 171e5c89e4eSSatish Balay Level: advanced 172e5c89e4eSSatish Balay 173e5c89e4eSSatish Balay Note: 174e5c89e4eSSatish Balay See PetscInitialize() for more general runtime options. 175e5c89e4eSSatish Balay 176e5c89e4eSSatish Balay .seealso: PetscInitialize(), PetscOptionsPrint(), PetscMallocDump(), PetscMPIDump(), PetscFinalize() 177e5c89e4eSSatish Balay @*/ 178e5c89e4eSSatish Balay PetscErrorCode PETSC_DLLEXPORT PetscEnd(void) 179e5c89e4eSSatish Balay { 180e5c89e4eSSatish Balay PetscFunctionBegin; 181e5c89e4eSSatish Balay PetscFinalize(); 182e5c89e4eSSatish Balay exit(0); 183e5c89e4eSSatish Balay return 0; 184e5c89e4eSSatish Balay } 185e5c89e4eSSatish Balay 186e5c89e4eSSatish Balay PetscTruth PetscOptionsPublish = PETSC_FALSE; 187e5c89e4eSSatish Balay EXTERN PetscErrorCode PetscSetUseTrMalloc_Private(void); 188e5c89e4eSSatish Balay extern PetscTruth petscsetmallocvisited; 189e5c89e4eSSatish Balay static char emacsmachinename[256]; 190e5c89e4eSSatish Balay 191e5c89e4eSSatish Balay PetscErrorCode (*PetscExternalVersionFunction)(MPI_Comm) = 0; 192e5c89e4eSSatish Balay PetscErrorCode (*PetscExternalHelpFunction)(MPI_Comm) = 0; 193e5c89e4eSSatish Balay 194e5c89e4eSSatish Balay #undef __FUNCT__ 195e5c89e4eSSatish Balay #define __FUNCT__ "PetscSetHelpVersionFunctions" 196e5c89e4eSSatish Balay /*@C 197e5c89e4eSSatish Balay PetscSetHelpVersionFunctions - Sets functions that print help and version information 198e5c89e4eSSatish Balay before the PETSc help and version information is printed. Must call BEFORE PetscInitialize(). 199e5c89e4eSSatish Balay This routine enables a "higher-level" package that uses PETSc to print its messages first. 200e5c89e4eSSatish Balay 201e5c89e4eSSatish Balay Input Parameter: 202e5c89e4eSSatish Balay + help - the help function (may be PETSC_NULL) 203e5c89e4eSSatish Balay - version - the version function (may be PETSc null) 204e5c89e4eSSatish Balay 205e5c89e4eSSatish Balay Level: developer 206e5c89e4eSSatish Balay 207e5c89e4eSSatish Balay Concepts: package help message 208e5c89e4eSSatish Balay 209e5c89e4eSSatish Balay @*/ 210e5c89e4eSSatish Balay PetscErrorCode PETSC_DLLEXPORT PetscSetHelpVersionFunctions(PetscErrorCode (*help)(MPI_Comm),PetscErrorCode (*version)(MPI_Comm)) 211e5c89e4eSSatish Balay { 212e5c89e4eSSatish Balay PetscFunctionBegin; 213e5c89e4eSSatish Balay PetscExternalHelpFunction = help; 214e5c89e4eSSatish Balay PetscExternalVersionFunction = version; 215e5c89e4eSSatish Balay PetscFunctionReturn(0); 216e5c89e4eSSatish Balay } 217e5c89e4eSSatish Balay 218e5c89e4eSSatish Balay #undef __FUNCT__ 219e5c89e4eSSatish Balay #define __FUNCT__ "PetscOptionsCheckInitial_Private" 220e5c89e4eSSatish Balay PetscErrorCode PETSC_DLLEXPORT PetscOptionsCheckInitial_Private(void) 221e5c89e4eSSatish Balay { 222e5c89e4eSSatish Balay char string[64],mname[PETSC_MAX_PATH_LEN],*f; 223e5c89e4eSSatish Balay MPI_Comm comm = PETSC_COMM_WORLD; 224ac8aedf1SMatthew Knepley PetscTruth flg1,flg2,flg3,flag,flgz,flgzout; 225e5c89e4eSSatish Balay PetscErrorCode ierr; 226e5c89e4eSSatish Balay PetscInt si; 227e5c89e4eSSatish Balay int i; 228e5c89e4eSSatish Balay PetscMPIInt rank; 229e5c89e4eSSatish Balay char version[256]; 230e5c89e4eSSatish Balay 231e5c89e4eSSatish Balay PetscFunctionBegin; 232e5c89e4eSSatish Balay ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr); 233e5c89e4eSSatish Balay 234e5c89e4eSSatish Balay /* 235e5c89e4eSSatish Balay Setup the memory management; support for tracing malloc() usage 236e5c89e4eSSatish Balay */ 237e5c89e4eSSatish Balay ierr = PetscOptionsHasName(PETSC_NULL,"-malloc_log",&flg3);CHKERRQ(ierr); 238e5c89e4eSSatish Balay #if defined(PETSC_USE_DEBUG) 239e5c89e4eSSatish Balay ierr = PetscOptionsGetTruth(PETSC_NULL,"-malloc",&flg1,&flg2);CHKERRQ(ierr); 240e5c89e4eSSatish Balay if ((!flg2 || flg1) && !petscsetmallocvisited) { 241e5c89e4eSSatish Balay ierr = PetscSetUseTrMalloc_Private();CHKERRQ(ierr); 242e5c89e4eSSatish Balay } 243e5c89e4eSSatish Balay #else 244e5c89e4eSSatish Balay ierr = PetscOptionsHasName(PETSC_NULL,"-malloc_dump",&flg1);CHKERRQ(ierr); 245e5c89e4eSSatish Balay ierr = PetscOptionsHasName(PETSC_NULL,"-malloc",&flg2);CHKERRQ(ierr); 246e5c89e4eSSatish Balay if (flg1 || flg2 || flg3) {ierr = PetscSetUseTrMalloc_Private();CHKERRQ(ierr);} 247e5c89e4eSSatish Balay #endif 248e5c89e4eSSatish Balay if (flg3) { 249e5c89e4eSSatish Balay ierr = PetscMallocSetDumpLog();CHKERRQ(ierr); 250e5c89e4eSSatish Balay } 251e5c89e4eSSatish Balay ierr = PetscOptionsHasName(PETSC_NULL,"-malloc_debug",&flg1);CHKERRQ(ierr); 252e5c89e4eSSatish Balay if (flg1) { 253e5c89e4eSSatish Balay ierr = PetscSetUseTrMalloc_Private();CHKERRQ(ierr); 254e5c89e4eSSatish Balay ierr = PetscMallocDebug(PETSC_TRUE);CHKERRQ(ierr); 255e5c89e4eSSatish Balay } 256e5c89e4eSSatish Balay 2577783f70dSSatish Balay ierr = PetscOptionsHasName(PETSC_NULL,"-malloc_info",&flg1);CHKERRQ(ierr); 2587783f70dSSatish Balay if (!flg1) { 259e5c89e4eSSatish Balay ierr = PetscOptionsHasName(PETSC_NULL,"-memory_info",&flg1);CHKERRQ(ierr); 2607783f70dSSatish Balay } 261e5c89e4eSSatish Balay if (flg1) { 262e5c89e4eSSatish Balay ierr = PetscMemorySetGetMaximumUsage();CHKERRQ(ierr); 263e5c89e4eSSatish Balay } 264e5c89e4eSSatish Balay 265e5c89e4eSSatish Balay /* 266e5c89e4eSSatish Balay Set the display variable for graphics 267e5c89e4eSSatish Balay */ 268e5c89e4eSSatish Balay ierr = PetscSetDisplay();CHKERRQ(ierr); 269e5c89e4eSSatish Balay 270e5c89e4eSSatish Balay /* 271e5c89e4eSSatish Balay Print the PETSc version information 272e5c89e4eSSatish Balay */ 273e5c89e4eSSatish Balay ierr = PetscOptionsHasName(PETSC_NULL,"-v",&flg1);CHKERRQ(ierr); 274e5c89e4eSSatish Balay ierr = PetscOptionsHasName(PETSC_NULL,"-version",&flg2);CHKERRQ(ierr); 275e5c89e4eSSatish Balay ierr = PetscOptionsHasName(PETSC_NULL,"-help",&flg3);CHKERRQ(ierr); 276e5c89e4eSSatish Balay if (flg1 || flg2 || flg3){ 277e5c89e4eSSatish Balay 278e5c89e4eSSatish Balay /* 279e5c89e4eSSatish Balay Print "higher-level" package version message 280e5c89e4eSSatish Balay */ 281e5c89e4eSSatish Balay if (PetscExternalVersionFunction) { 282e5c89e4eSSatish Balay ierr = (*PetscExternalVersionFunction)(comm);CHKERRQ(ierr); 283e5c89e4eSSatish Balay } 284e5c89e4eSSatish Balay 285a523d312SBarry Smith ierr = PetscGetVersion(version,256);CHKERRQ(ierr); 286e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"--------------------------------------------\ 287e5c89e4eSSatish Balay ------------------------------\n");CHKERRQ(ierr); 288e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"%s\n",version);CHKERRQ(ierr); 289e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"%s",PETSC_AUTHOR_INFO);CHKERRQ(ierr); 290e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"See docs/copyright.html for copyright information\n");CHKERRQ(ierr); 291e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"See docs/changes/index.html for recent updates.\n");CHKERRQ(ierr); 292e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"See docs/troubleshooting.html for problems.\n");CHKERRQ(ierr); 293e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"See docs/manualpages/index.html for help. \n");CHKERRQ(ierr); 294e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"Libraries linked from %s\n",PETSC_LIB_DIR);CHKERRQ(ierr); 295e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"--------------------------------------------\ 296e5c89e4eSSatish Balay ------------------------------\n");CHKERRQ(ierr); 297e5c89e4eSSatish Balay } 298e5c89e4eSSatish Balay 299e5c89e4eSSatish Balay /* 300e5c89e4eSSatish Balay Print "higher-level" package help message 301e5c89e4eSSatish Balay */ 302e5c89e4eSSatish Balay if (flg3){ 303e5c89e4eSSatish Balay if (PetscExternalHelpFunction) { 304e5c89e4eSSatish Balay ierr = (*PetscExternalHelpFunction)(comm);CHKERRQ(ierr); 305e5c89e4eSSatish Balay } 306e5c89e4eSSatish Balay } 307e5c89e4eSSatish Balay 308e5c89e4eSSatish Balay /* 309e5c89e4eSSatish Balay Setup the error handling 310e5c89e4eSSatish Balay */ 311e5c89e4eSSatish Balay ierr = PetscOptionsHasName(PETSC_NULL,"-fp_trap",&flg1);CHKERRQ(ierr); 312e5c89e4eSSatish Balay if (flg1) { ierr = PetscSetFPTrap(PETSC_FP_TRAP_ON);CHKERRQ(ierr); } 313e5c89e4eSSatish Balay ierr = PetscOptionsHasName(PETSC_NULL,"-on_error_abort",&flg1);CHKERRQ(ierr); 314e5c89e4eSSatish Balay if (flg1) { ierr = PetscPushErrorHandler(PetscAbortErrorHandler,0);CHKERRQ(ierr)} 315e8fb0fc0SBarry Smith ierr = PetscOptionsHasName(PETSC_NULL,"-on_error_mpiabort",&flg1);CHKERRQ(ierr); 316e8fb0fc0SBarry Smith if (flg1) { ierr = PetscPushErrorHandler(PetscMPIAbortErrorHandler,0);CHKERRQ(ierr)} 317e5c89e4eSSatish Balay ierr = PetscOptionsHasName(PETSC_NULL,"-mpi_return_on_error",&flg1);CHKERRQ(ierr); 318e5c89e4eSSatish Balay if (flg1) { 319e5c89e4eSSatish Balay ierr = MPI_Errhandler_set(comm,MPI_ERRORS_RETURN);CHKERRQ(ierr); 320e5c89e4eSSatish Balay } 321e5c89e4eSSatish Balay ierr = PetscOptionsHasName(PETSC_NULL,"-no_signal_handler",&flg1);CHKERRQ(ierr); 322e5c89e4eSSatish Balay if (!flg1) { ierr = PetscPushSignalHandler(PetscDefaultSignalHandler,(void*)0);CHKERRQ(ierr) } 323e5c89e4eSSatish Balay 324e5c89e4eSSatish Balay /* 325e5c89e4eSSatish Balay Setup debugger information 326e5c89e4eSSatish Balay */ 327e5c89e4eSSatish Balay ierr = PetscSetDefaultDebugger();CHKERRQ(ierr); 328e5c89e4eSSatish Balay ierr = PetscOptionsGetString(PETSC_NULL,"-on_error_attach_debugger",string,64,&flg1);CHKERRQ(ierr); 329e5c89e4eSSatish Balay if (flg1) { 330e5c89e4eSSatish Balay MPI_Errhandler err_handler; 331e5c89e4eSSatish Balay 332e5c89e4eSSatish Balay ierr = PetscSetDebuggerFromString(string);CHKERRQ(ierr); 333e5c89e4eSSatish Balay ierr = MPI_Errhandler_create((MPI_Handler_function*)Petsc_MPI_DebuggerOnError,&err_handler);CHKERRQ(ierr); 334e5c89e4eSSatish Balay ierr = MPI_Errhandler_set(comm,err_handler);CHKERRQ(ierr); 335e5c89e4eSSatish Balay ierr = PetscPushErrorHandler(PetscAttachDebuggerErrorHandler,0);CHKERRQ(ierr); 336e5c89e4eSSatish Balay } 3375e96ac45SJed Brown ierr = PetscOptionsGetString(PETSC_NULL,"-debug_terminal",string,64,&flg1);CHKERRQ(ierr); 3385e96ac45SJed Brown if (flg1) { ierr = PetscSetDebugTerminal(string);CHKERRQ(ierr); } 339e5c89e4eSSatish Balay ierr = PetscOptionsGetString(PETSC_NULL,"-start_in_debugger",string,64,&flg1);CHKERRQ(ierr); 340e5c89e4eSSatish Balay ierr = PetscOptionsGetString(PETSC_NULL,"-stop_for_debugger",string,64,&flg2);CHKERRQ(ierr); 341e5c89e4eSSatish Balay if (flg1 || flg2) { 342e5c89e4eSSatish Balay PetscMPIInt size; 343e5c89e4eSSatish Balay PetscInt lsize,*nodes; 344e5c89e4eSSatish Balay MPI_Errhandler err_handler; 345e5c89e4eSSatish Balay /* 346e5c89e4eSSatish Balay we have to make sure that all processors have opened 347e5c89e4eSSatish Balay connections to all other processors, otherwise once the 348e5c89e4eSSatish Balay debugger has stated it is likely to receive a SIGUSR1 349e5c89e4eSSatish Balay and kill the program. 350e5c89e4eSSatish Balay */ 351e5c89e4eSSatish Balay ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRQ(ierr); 352e5c89e4eSSatish Balay if (size > 2) { 353e5c89e4eSSatish Balay PetscMPIInt dummy; 354e5c89e4eSSatish Balay MPI_Status status; 355e5c89e4eSSatish Balay for (i=0; i<size; i++) { 356e5c89e4eSSatish Balay if (rank != i) { 357e5c89e4eSSatish Balay ierr = MPI_Send(&dummy,1,MPI_INT,i,109,PETSC_COMM_WORLD);CHKERRQ(ierr); 358e5c89e4eSSatish Balay } 359e5c89e4eSSatish Balay } 360e5c89e4eSSatish Balay for (i=0; i<size; i++) { 361e5c89e4eSSatish Balay if (rank != i) { 362e5c89e4eSSatish Balay ierr = MPI_Recv(&dummy,1,MPI_INT,i,109,PETSC_COMM_WORLD,&status);CHKERRQ(ierr); 363e5c89e4eSSatish Balay } 364e5c89e4eSSatish Balay } 365e5c89e4eSSatish Balay } 366e5c89e4eSSatish Balay /* check if this processor node should be in debugger */ 367e5c89e4eSSatish Balay ierr = PetscMalloc(size*sizeof(PetscInt),&nodes);CHKERRQ(ierr); 368e5c89e4eSSatish Balay lsize = size; 369e5c89e4eSSatish Balay ierr = PetscOptionsGetIntArray(PETSC_NULL,"-debugger_nodes",nodes,&lsize,&flag);CHKERRQ(ierr); 370e5c89e4eSSatish Balay if (flag) { 371e5c89e4eSSatish Balay for (i=0; i<lsize; i++) { 372e5c89e4eSSatish Balay if (nodes[i] == rank) { flag = PETSC_FALSE; break; } 373e5c89e4eSSatish Balay } 374e5c89e4eSSatish Balay } 375e5c89e4eSSatish Balay if (!flag) { 376e5c89e4eSSatish Balay ierr = PetscSetDebuggerFromString(string);CHKERRQ(ierr); 377e5c89e4eSSatish Balay ierr = PetscPushErrorHandler(PetscAbortErrorHandler,0);CHKERRQ(ierr); 378e5c89e4eSSatish Balay if (flg1) { 379e5c89e4eSSatish Balay ierr = PetscAttachDebugger();CHKERRQ(ierr); 380e5c89e4eSSatish Balay } else { 381e5c89e4eSSatish Balay ierr = PetscStopForDebugger();CHKERRQ(ierr); 382e5c89e4eSSatish Balay } 383e5c89e4eSSatish Balay ierr = MPI_Errhandler_create((MPI_Handler_function*)Petsc_MPI_AbortOnError,&err_handler);CHKERRQ(ierr); 384e5c89e4eSSatish Balay ierr = MPI_Errhandler_set(comm,err_handler);CHKERRQ(ierr); 385e5c89e4eSSatish Balay } 386e5c89e4eSSatish Balay ierr = PetscFree(nodes);CHKERRQ(ierr); 387e5c89e4eSSatish Balay } 388e5c89e4eSSatish Balay 389e5c89e4eSSatish Balay ierr = PetscOptionsGetString(PETSC_NULL,"-on_error_emacs",emacsmachinename,128,&flg1);CHKERRQ(ierr); 390e5c89e4eSSatish Balay if (flg1 && !rank) {ierr = PetscPushErrorHandler(PetscEmacsClientErrorHandler,emacsmachinename);CHKERRQ(ierr)} 391e5c89e4eSSatish Balay 392*192daf7cSBarry Smith 39322b84c2fSbcordonn /* 39422b84c2fSbcordonn Activates new sockets for zope if needed 39522b84c2fSbcordonn */ 39684ab5442Sbcordonn ierr=PetscOptionsHasName(PETSC_NULL,"-zope", &flgz); CHKERRQ(ierr); 397d8c6e182Sbcordonn ierr=PetscOptionsHasName(PETSC_NULL,"-nostdout", &flgzout); CHKERRQ(ierr); 3986dc8fec2Sbcordonn if(flgz){ 399d8c6e182Sbcordonn extern FILE* PETSC_ZOPEFD; 40022b84c2fSbcordonn int sockfd; 401f1384234SBarry Smith char hostname[256]; 40222b84c2fSbcordonn char username[256]; 4036dc8fec2Sbcordonn int remoteport = 9999; 40484ab5442Sbcordonn ierr=PetscOptionsGetString(PETSC_NULL, "-zope", hostname, 256, &flgz);CHKERRQ(ierr); 40584ab5442Sbcordonn if(!hostname[0]){ 40684ab5442Sbcordonn ierr=PetscGetHostName(hostname,256); CHKERRQ(ierr);} 40722b84c2fSbcordonn ierr=PetscOpenSocket(hostname, remoteport, &sockfd);CHKERRQ(ierr); 408606f100bSbcordonn ierr = PetscGetUserName(username, 256); 40922b84c2fSbcordonn PETSC_ZOPEFD = fdopen(sockfd, "w"); 41022b84c2fSbcordonn if(flgzout){ 41122b84c2fSbcordonn PETSC_STDOUT = PETSC_ZOPEFD; 412606f100bSbcordonn fprintf(PETSC_STDOUT, "<<<user>>> %s\n",username); 4136dc8fec2Sbcordonn fprintf(PETSC_STDOUT, "<<<start>>>"); 4146dc8fec2Sbcordonn } 415d8c6e182Sbcordonn else{ 416d8c6e182Sbcordonn fprintf(PETSC_ZOPEFD, "<<<user>>> %s\n",username); 417d8c6e182Sbcordonn fprintf(PETSC_ZOPEFD, "<<<start>>>"); 418d8c6e182Sbcordonn }} 4196dc8fec2Sbcordonn 420e5c89e4eSSatish Balay /* 421e5c89e4eSSatish Balay Setup profiling and logging 422e5c89e4eSSatish Balay */ 4236cf91177SBarry Smith #if defined (PETSC_USE_INFO) 4246cf91177SBarry Smith ierr = PetscOptionsHasName(PETSC_NULL,"-info",&flg1);CHKERRQ(ierr); 425e5c89e4eSSatish Balay if (flg1) { 426e5c89e4eSSatish Balay char logname[PETSC_MAX_PATH_LEN]; logname[0] = 0; 4276cf91177SBarry Smith ierr = PetscOptionsGetString(PETSC_NULL,"-info",logname,250,&flg1);CHKERRQ(ierr); 428e5c89e4eSSatish Balay if (logname[0]) { 4296cf91177SBarry Smith PetscInfoAllow(PETSC_TRUE,logname); 430e5c89e4eSSatish Balay } else { 4316cf91177SBarry Smith PetscInfoAllow(PETSC_TRUE,PETSC_NULL); 432e5c89e4eSSatish Balay } 433e5c89e4eSSatish Balay } 434865f6aa8SSatish Balay #endif 435865f6aa8SSatish Balay #if defined(PETSC_USE_LOG) 436865f6aa8SSatish Balay mname[0] = 0; 437865f6aa8SSatish Balay ierr = PetscOptionsGetString(PETSC_NULL,"-log_history",mname,PETSC_MAX_PATH_LEN,&flg1);CHKERRQ(ierr); 438865f6aa8SSatish Balay if (flg1) { 439865f6aa8SSatish Balay if (mname[0]) { 440865f6aa8SSatish Balay ierr = PetscLogOpenHistoryFile(mname,&petsc_history);CHKERRQ(ierr); 441865f6aa8SSatish Balay } else { 442865f6aa8SSatish Balay ierr = PetscLogOpenHistoryFile(0,&petsc_history);CHKERRQ(ierr); 443865f6aa8SSatish Balay } 444865f6aa8SSatish Balay } 445e5c89e4eSSatish Balay #if defined(PETSC_HAVE_MPE) 446e5c89e4eSSatish Balay ierr = PetscOptionsHasName(PETSC_NULL,"-log_mpe",&flg1);CHKERRQ(ierr); 447e5c89e4eSSatish Balay if (flg1) PetscLogMPEBegin(); 448e5c89e4eSSatish Balay #endif 449e5c89e4eSSatish Balay ierr = PetscOptionsHasName(PETSC_NULL,"-log_all",&flg1);CHKERRQ(ierr); 450e5c89e4eSSatish Balay ierr = PetscOptionsHasName(PETSC_NULL,"-log",&flg2);CHKERRQ(ierr); 451e5c89e4eSSatish Balay ierr = PetscOptionsHasName(PETSC_NULL,"-log_summary",&flg3);CHKERRQ(ierr); 452e5c89e4eSSatish Balay if (flg1) { ierr = PetscLogAllBegin();CHKERRQ(ierr); } 453e5c89e4eSSatish Balay else if (flg2 || flg3) { ierr = PetscLogBegin();CHKERRQ(ierr);} 454e5c89e4eSSatish Balay 455e5c89e4eSSatish Balay ierr = PetscOptionsGetString(PETSC_NULL,"-log_trace",mname,250,&flg1);CHKERRQ(ierr); 456e5c89e4eSSatish Balay if (flg1) { 457e5c89e4eSSatish Balay char name[PETSC_MAX_PATH_LEN],fname[PETSC_MAX_PATH_LEN]; 458e5c89e4eSSatish Balay FILE *file; 459e5c89e4eSSatish Balay if (mname[0]) { 460e5c89e4eSSatish Balay sprintf(name,"%s.%d",mname,rank); 461e5c89e4eSSatish Balay ierr = PetscFixFilename(name,fname);CHKERRQ(ierr); 462e5c89e4eSSatish Balay file = fopen(fname,"w"); 463e5c89e4eSSatish Balay if (!file) { 464e5c89e4eSSatish Balay SETERRQ1(PETSC_ERR_FILE_OPEN,"Unable to open trace file: %s",fname); 465e5c89e4eSSatish Balay } 466e5c89e4eSSatish Balay } else { 467da9f1d6bSBarry Smith file = PETSC_STDOUT; 468e5c89e4eSSatish Balay } 469e5c89e4eSSatish Balay ierr = PetscLogTraceBegin(file);CHKERRQ(ierr); 470e5c89e4eSSatish Balay } 471e5c89e4eSSatish Balay #endif 472e5c89e4eSSatish Balay 473e5c89e4eSSatish Balay /* 474e5c89e4eSSatish Balay Setup building of stack frames for all function calls 475e5c89e4eSSatish Balay */ 476e5c89e4eSSatish Balay #if defined(PETSC_USE_DEBUG) 477e5c89e4eSSatish Balay ierr = PetscStackCreate();CHKERRQ(ierr); 478e5c89e4eSSatish Balay #endif 479e5c89e4eSSatish Balay 48053acd3b1SBarry Smith ierr = PetscOptionsHasName(PETSC_NULL,"-options_gui",&PetscOptionsPublish);CHKERRQ(ierr); 481e5c89e4eSSatish Balay 482e5c89e4eSSatish Balay /* 483e5c89e4eSSatish Balay Print basic help message 484e5c89e4eSSatish Balay */ 485e5c89e4eSSatish Balay ierr = PetscOptionsHasName(PETSC_NULL,"-help",&flg1);CHKERRQ(ierr); 486e5c89e4eSSatish Balay if (flg1) { 487e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"Options for all PETSc programs:\n");CHKERRQ(ierr); 488e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -on_error_abort: cause an abort when an error is");CHKERRQ(ierr); 489e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," detected. Useful \n only when run in the debugger\n");CHKERRQ(ierr); 490e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -on_error_attach_debugger [gdb,dbx,xxgdb,ups,noxterm]\n");CHKERRQ(ierr); 491e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," start the debugger in new xterm\n");CHKERRQ(ierr); 492e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," unless noxterm is given\n");CHKERRQ(ierr); 493e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -start_in_debugger [gdb,dbx,xxgdb,ups,noxterm]\n");CHKERRQ(ierr); 494e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," start all processes in the debugger\n");CHKERRQ(ierr); 495e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -on_error_emacs <machinename>\n");CHKERRQ(ierr); 496e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," emacs jumps to error file\n");CHKERRQ(ierr); 497e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -debugger_nodes [n1,n2,..] Nodes to start in debugger\n");CHKERRQ(ierr); 498e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -debugger_pause [m] : delay (in seconds) to attach debugger\n");CHKERRQ(ierr); 499e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -stop_for_debugger : prints message on how to attach debugger manually\n");CHKERRQ(ierr); 500e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," waits the delay for you to attach\n");CHKERRQ(ierr); 501e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -display display: Location where graphics and debuggers are displayed\n");CHKERRQ(ierr); 502e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -no_signal_handler: do not trap error signals\n");CHKERRQ(ierr); 503e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -mpi_return_on_error: MPI returns error code, rather than abort on internal error\n");CHKERRQ(ierr); 504e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -fp_trap: stop on floating point exceptions\n");CHKERRQ(ierr); 505e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," note on IBM RS6000 this slows run greatly\n");CHKERRQ(ierr); 506e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -malloc_dump <optional filename>: dump list of unfreed memory at conclusion\n");CHKERRQ(ierr); 507e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -malloc: use our error checking malloc\n");CHKERRQ(ierr); 508e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -malloc no: don't use error checking malloc\n");CHKERRQ(ierr); 509e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -mallocinfo: prints total memory usage\n");CHKERRQ(ierr); 510e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -malloc_debug: enables extended checking for memory corruption\n");CHKERRQ(ierr); 511e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -options_table: dump list of options inputted\n");CHKERRQ(ierr); 512e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -options_left: dump list of unused options\n");CHKERRQ(ierr); 513e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -options_left no: don't dump list of unused options\n");CHKERRQ(ierr); 514e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -tmp tmpdir: alternative /tmp directory\n");CHKERRQ(ierr); 515e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -shared_tmp: tmp directory is shared by all processors\n");CHKERRQ(ierr); 516a8c7a070SBarry Smith ierr = (*PetscHelpPrintf)(comm," -not_shared_tmp: each processor has separate tmp directory\n");CHKERRQ(ierr); 517e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -memory_info: print memory usage at end of run\n");CHKERRQ(ierr); 518e5c89e4eSSatish Balay #if defined(PETSC_USE_LOG) 519e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -get_total_flops: total flops over all processors\n");CHKERRQ(ierr); 520e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -log[_all _summary]: logging objects and events\n");CHKERRQ(ierr); 521e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -log_trace [filename]: prints trace of all PETSc calls\n");CHKERRQ(ierr); 522e5c89e4eSSatish Balay #if defined(PETSC_HAVE_MPE) 523e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -log_mpe: Also create logfile viewable through upshot\n");CHKERRQ(ierr); 524e5c89e4eSSatish Balay #endif 5256cf91177SBarry Smith ierr = (*PetscHelpPrintf)(comm," -info <optional filename>: print informative messages about the calculations\n");CHKERRQ(ierr); 526e5c89e4eSSatish Balay #endif 527e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -v: prints PETSc version number and release date\n");CHKERRQ(ierr); 528e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -options_file <file>: reads options from file\n");CHKERRQ(ierr); 529e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -petsc_sleep n: sleeps n seconds before running program\n");CHKERRQ(ierr); 530e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"-----------------------------------------------\n");CHKERRQ(ierr); 531e5c89e4eSSatish Balay } 532e5c89e4eSSatish Balay 533e5c89e4eSSatish Balay ierr = PetscOptionsGetInt(PETSC_NULL,"-petsc_sleep",&si,&flg1);CHKERRQ(ierr); 534e5c89e4eSSatish Balay if (flg1) { 535e5c89e4eSSatish Balay ierr = PetscSleep(si);CHKERRQ(ierr); 536e5c89e4eSSatish Balay } 537e5c89e4eSSatish Balay 5386cf91177SBarry Smith ierr = PetscOptionsGetString(PETSC_NULL,"-info_exclude",mname,PETSC_MAX_PATH_LEN,&flg1);CHKERRQ(ierr); 539e5c89e4eSSatish Balay ierr = PetscStrstr(mname,"null",&f);CHKERRQ(ierr); 540e5c89e4eSSatish Balay if (f) { 5416cf91177SBarry Smith ierr = PetscInfoDeactivateClass(PETSC_NULL);CHKERRQ(ierr); 542e5c89e4eSSatish Balay } 543e5c89e4eSSatish Balay 544*192daf7cSBarry Smith 545e5c89e4eSSatish Balay PetscFunctionReturn(0); 546e5c89e4eSSatish Balay } 547e5c89e4eSSatish Balay 548e5c89e4eSSatish Balay 549