xref: /petsc/src/sys/objects/init.c (revision 8cd53115ffcc1a11430390fa03a09f6efc0acda5)
1e5c89e4eSSatish Balay /*
2e5c89e4eSSatish Balay 
3e5c89e4eSSatish Balay    This file defines part of the initialization of PETSc
4e5c89e4eSSatish Balay 
5f2d66bcaSShri Abhyankar   This file uses regular malloc and free because it cannot known
6e5c89e4eSSatish Balay   what malloc is being used until it has already processed the input.
7e5c89e4eSSatish Balay */
8ef386f4bSSatish Balay 
9ef386f4bSSatish Balay #include <petscsys.h>        /*I  "petscsys.h"   I*/
10665c2dedSJed Brown #include <petscviewer.h>
11ef386f4bSSatish Balay 
12ba61063dSBarry Smith #if defined(PETSC_HAVE_SYS_SYSINFO_H)
1351d315f7SKerry Stevens #include <sys/sysinfo.h>
14ba61063dSBarry Smith #endif
15121deb67SSatish Balay #if defined(PETSC_HAVE_UNISTD_H)
1651d315f7SKerry Stevens #include <unistd.h>
17121deb67SSatish Balay #endif
18555d055bSBarry Smith 
19e5c89e4eSSatish Balay /* ------------------------Nasty global variables -------------------------------*/
20e5c89e4eSSatish Balay /*
21e5c89e4eSSatish Balay      Indicates if PETSc started up MPI, or it was
22e5c89e4eSSatish Balay    already started before PETSc was initialized.
23e5c89e4eSSatish Balay */
240cbf60d0SJose E. Roman PetscBool   PetscBeganMPI         = PETSC_FALSE;
250cbf60d0SJose E. Roman PetscBool   PetscInitializeCalled = PETSC_FALSE;
260cbf60d0SJose E. Roman PetscBool   PetscFinalizeCalled   = PETSC_FALSE;
27d6f2c3cbSBarry Smith 
287087cfbeSBarry Smith PetscMPIInt PetscGlobalRank       = -1;
297087cfbeSBarry Smith PetscMPIInt PetscGlobalSize       = -1;
30ba61063dSBarry Smith 
3150f81f78SJed Brown #if defined(PETSC_HAVE_COMPLEX)
32e5c89e4eSSatish Balay #if defined(PETSC_COMPLEX_INSTANTIATE)
33e5c89e4eSSatish Balay template <> class std::complex<double>; /* instantiate complex template class */
34e5c89e4eSSatish Balay #endif
352c876bd9SBarry Smith #if !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)
36500d8756SSatish Balay MPI_Datatype MPIU_C_DOUBLE_COMPLEX;
37500d8756SSatish Balay MPI_Datatype MPIU_C_COMPLEX;
382c876bd9SBarry Smith #endif
398619c96cSJed Brown 
408619c96cSJed Brown /*MC
418619c96cSJed Brown    PETSC_i - the imaginary number i
428619c96cSJed Brown 
438619c96cSJed Brown    Synopsis:
448619c96cSJed Brown    #include <petscsys.h>
458619c96cSJed Brown    PetscComplex PETSC_i;
468619c96cSJed Brown 
478619c96cSJed Brown    Level: beginner
488619c96cSJed Brown 
498619c96cSJed Brown    Note:
50*8cd53115SBarry Smith    Complex numbers are automatically available if PETSc located a working complex implementation
518619c96cSJed Brown 
528619c96cSJed Brown .seealso: PetscRealPart(), PetscImaginaryPart(), PetscRealPartComplex(), PetscImaginaryPartComplex()
538619c96cSJed Brown M*/
5450f81f78SJed Brown PetscComplex PETSC_i;
55e5c89e4eSSatish Balay #endif
56ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL___FLOAT128)
57c90a1750SBarry Smith MPI_Datatype MPIU___FLOAT128 = 0;
587c2de775SJed Brown #if defined(PETSC_HAVE_COMPLEX)
598c764dc5SJose Roman MPI_Datatype MPIU___COMPLEX128 = 0;
608c764dc5SJose Roman #endif
61c90a1750SBarry Smith #endif
627087cfbeSBarry Smith MPI_Datatype MPIU_2SCALAR = 0;
6344041f26SJed Brown #if defined(PETSC_USE_64BIT_INDICES) || !defined(MPI_2INT)
647087cfbeSBarry Smith MPI_Datatype MPIU_2INT = 0;
6544041f26SJed Brown #endif
668ad47952SJed Brown MPI_Datatype MPIU_BOOL;
678ad47952SJed Brown MPI_Datatype MPIU_ENUM;
6875567043SBarry Smith 
69e5c89e4eSSatish Balay /*
70e5c89e4eSSatish Balay        Function that is called to display all error messages
71e5c89e4eSSatish Balay */
727087cfbeSBarry Smith PetscErrorCode (*PetscErrorPrintf)(const char [],...)          = PetscErrorPrintfDefault;
737087cfbeSBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char [],...)  = PetscHelpPrintfDefault;
74238ccf28SShri Abhyankar #if defined(PETSC_HAVE_MATLAB_ENGINE)
757087cfbeSBarry Smith PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list)    = PetscVFPrintf_Matlab;
76238ccf28SShri Abhyankar #else
777087cfbeSBarry Smith PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list)    = PetscVFPrintfDefault;
78238ccf28SShri Abhyankar #endif
79bab1f7e6SVictor Minden /*
804cf1874eSKarl Rupp   This is needed to turn on/off GPU synchronization
818b5db460SBarry Smith */
828b5db460SBarry Smith PetscBool PetscCUSPSynchronize = PETSC_FALSE;
834cf1874eSKarl Rupp PetscBool PetscViennaCLSynchronize = PETSC_FALSE;
84bab1f7e6SVictor Minden 
85e5c89e4eSSatish Balay /* ------------------------------------------------------------------------------*/
86e5c89e4eSSatish Balay /*
87e5c89e4eSSatish Balay    Optional file where all PETSc output from various prints is saved
88e5c89e4eSSatish Balay */
890298fd71SBarry Smith FILE *petsc_history = NULL;
90e5c89e4eSSatish Balay 
91e5c89e4eSSatish Balay #undef __FUNCT__
92f3dea69dSBarry Smith #define __FUNCT__ "PetscOpenHistoryFile"
937087cfbeSBarry Smith PetscErrorCode  PetscOpenHistoryFile(const char filename[],FILE **fd)
94e5c89e4eSSatish Balay {
95e5c89e4eSSatish Balay   PetscErrorCode ierr;
96e5c89e4eSSatish Balay   PetscMPIInt    rank,size;
97e5c89e4eSSatish Balay   char           pfile[PETSC_MAX_PATH_LEN],pname[PETSC_MAX_PATH_LEN],fname[PETSC_MAX_PATH_LEN],date[64];
98e5c89e4eSSatish Balay   char           version[256];
99e5c89e4eSSatish Balay 
100e5c89e4eSSatish Balay   PetscFunctionBegin;
101e5c89e4eSSatish Balay   ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr);
102e5c89e4eSSatish Balay   if (!rank) {
103e5c89e4eSSatish Balay     char        arch[10];
104f56c2debSBarry Smith     int         err;
105f56c2debSBarry Smith 
106e5c89e4eSSatish Balay     ierr = PetscGetArchType(arch,10);CHKERRQ(ierr);
107e5c89e4eSSatish Balay     ierr = PetscGetDate(date,64);CHKERRQ(ierr);
108a523d312SBarry Smith     ierr = PetscGetVersion(version,256);CHKERRQ(ierr);
109e5c89e4eSSatish Balay     ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRQ(ierr);
110e5c89e4eSSatish Balay     if (filename) {
111e5c89e4eSSatish Balay       ierr = PetscFixFilename(filename,fname);CHKERRQ(ierr);
112e5c89e4eSSatish Balay     } else {
113e5c89e4eSSatish Balay       ierr = PetscGetHomeDirectory(pfile,240);CHKERRQ(ierr);
114e5c89e4eSSatish Balay       ierr = PetscStrcat(pfile,"/.petschistory");CHKERRQ(ierr);
115e5c89e4eSSatish Balay       ierr = PetscFixFilename(pfile,fname);CHKERRQ(ierr);
116e5c89e4eSSatish Balay     }
117e5c89e4eSSatish Balay 
118a297a907SKarl Rupp     *fd = fopen(fname,"a");
119a297a907SKarl Rupp     if (!fd) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_FILE_OPEN,"Cannot open file: %s",fname);
120a297a907SKarl Rupp 
121e5c89e4eSSatish Balay     ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"---------------------------------------------------------\n");CHKERRQ(ierr);
122e5c89e4eSSatish Balay     ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"%s %s\n",version,date);CHKERRQ(ierr);
123e5c89e4eSSatish Balay     ierr = PetscGetProgramName(pname,PETSC_MAX_PATH_LEN);CHKERRQ(ierr);
124e5c89e4eSSatish Balay     ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"%s on a %s, %d proc. with options:\n",pname,arch,size);CHKERRQ(ierr);
125e5c89e4eSSatish Balay     ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"---------------------------------------------------------\n");CHKERRQ(ierr);
126a297a907SKarl Rupp 
127f56c2debSBarry Smith     err = fflush(*fd);
128e32f2f54SBarry Smith     if (err) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SYS,"fflush() failed on file");
129e5c89e4eSSatish Balay   }
130e5c89e4eSSatish Balay   PetscFunctionReturn(0);
131e5c89e4eSSatish Balay }
132e5c89e4eSSatish Balay 
133e5c89e4eSSatish Balay #undef __FUNCT__
134f3dea69dSBarry Smith #define __FUNCT__ "PetscCloseHistoryFile"
1357087cfbeSBarry Smith PetscErrorCode  PetscCloseHistoryFile(FILE **fd)
136e5c89e4eSSatish Balay {
137e5c89e4eSSatish Balay   PetscErrorCode ierr;
138e5c89e4eSSatish Balay   PetscMPIInt    rank;
139e5c89e4eSSatish Balay   char           date[64];
140f56c2debSBarry Smith   int            err;
141e5c89e4eSSatish Balay 
142e5c89e4eSSatish Balay   PetscFunctionBegin;
143e5c89e4eSSatish Balay   ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr);
144e5c89e4eSSatish Balay   if (!rank) {
145e5c89e4eSSatish Balay     ierr = PetscGetDate(date,64);CHKERRQ(ierr);
146e5c89e4eSSatish Balay     ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"---------------------------------------------------------\n");CHKERRQ(ierr);
147e5c89e4eSSatish Balay     ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"Finished at %s\n",date);CHKERRQ(ierr);
148e5c89e4eSSatish Balay     ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"---------------------------------------------------------\n");CHKERRQ(ierr);
149f56c2debSBarry Smith     err  = fflush(*fd);
150e32f2f54SBarry Smith     if (err) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SYS,"fflush() failed on file");
151f56c2debSBarry Smith     err = fclose(*fd);
152e32f2f54SBarry Smith     if (err) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SYS,"fclose() failed on file");
153e5c89e4eSSatish Balay   }
154e5c89e4eSSatish Balay   PetscFunctionReturn(0);
155e5c89e4eSSatish Balay }
156e5c89e4eSSatish Balay 
157e5c89e4eSSatish Balay /* ------------------------------------------------------------------------------*/
158e5c89e4eSSatish Balay 
159e5c89e4eSSatish Balay /*
160e5c89e4eSSatish Balay    This is ugly and probably belongs somewhere else, but I want to
161e5c89e4eSSatish Balay   be able to put a true MPI abort error handler with command line args.
162e5c89e4eSSatish Balay 
163e5c89e4eSSatish Balay     This is so MPI errors in the debugger will leave all the stack
1643c311c98SBarry Smith   frames. The default MP_Abort() cleans up and exits thus providing no useful information
1653c311c98SBarry Smith   in the debugger hence we call abort() instead of MPI_Abort().
166e5c89e4eSSatish Balay */
167e5c89e4eSSatish Balay 
168e5c89e4eSSatish Balay #undef __FUNCT__
169e5c89e4eSSatish Balay #define __FUNCT__ "Petsc_MPI_AbortOnError"
170e5c89e4eSSatish Balay void Petsc_MPI_AbortOnError(MPI_Comm *comm,PetscMPIInt *flag)
171e5c89e4eSSatish Balay {
172e5c89e4eSSatish Balay   PetscFunctionBegin;
1733c311c98SBarry Smith   (*PetscErrorPrintf)("MPI error %d\n",*flag);
174e5c89e4eSSatish Balay   abort();
175e5c89e4eSSatish Balay }
176e5c89e4eSSatish Balay 
177e5c89e4eSSatish Balay #undef __FUNCT__
178e5c89e4eSSatish Balay #define __FUNCT__ "Petsc_MPI_DebuggerOnError"
179e5c89e4eSSatish Balay void Petsc_MPI_DebuggerOnError(MPI_Comm *comm,PetscMPIInt *flag)
180e5c89e4eSSatish Balay {
181e5c89e4eSSatish Balay   PetscErrorCode ierr;
182e5c89e4eSSatish Balay 
183e5c89e4eSSatish Balay   PetscFunctionBegin;
1843c311c98SBarry Smith   (*PetscErrorPrintf)("MPI error %d\n",*flag);
185e5c89e4eSSatish Balay   ierr = PetscAttachDebugger();
186a297a907SKarl Rupp   if (ierr) MPI_Abort(*comm,*flag); /* hopeless so get out */
187e5c89e4eSSatish Balay }
188e5c89e4eSSatish Balay 
189e5c89e4eSSatish Balay #undef __FUNCT__
190e5c89e4eSSatish Balay #define __FUNCT__ "PetscEnd"
191e5c89e4eSSatish Balay /*@C
192e5c89e4eSSatish Balay    PetscEnd - Calls PetscFinalize() and then ends the program. This is useful if one
193e5c89e4eSSatish Balay      wishes a clean exit somewhere deep in the program.
194e5c89e4eSSatish Balay 
195e5c89e4eSSatish Balay    Collective on PETSC_COMM_WORLD
196e5c89e4eSSatish Balay 
197e5c89e4eSSatish Balay    Options Database Keys are the same as for PetscFinalize()
198e5c89e4eSSatish Balay 
199e5c89e4eSSatish Balay    Level: advanced
200e5c89e4eSSatish Balay 
201e5c89e4eSSatish Balay    Note:
202e5c89e4eSSatish Balay    See PetscInitialize() for more general runtime options.
203e5c89e4eSSatish Balay 
20488c29154SBarry Smith .seealso: PetscInitialize(), PetscOptionsView(), PetscMallocDump(), PetscMPIDump(), PetscFinalize()
205e5c89e4eSSatish Balay @*/
2067087cfbeSBarry Smith PetscErrorCode  PetscEnd(void)
207e5c89e4eSSatish Balay {
208e5c89e4eSSatish Balay   PetscFunctionBegin;
209e5c89e4eSSatish Balay   PetscFinalize();
210e5c89e4eSSatish Balay   exit(0);
211e5c89e4eSSatish Balay   return 0;
212e5c89e4eSSatish Balay }
213e5c89e4eSSatish Balay 
214ace3abfcSBarry Smith PetscBool PetscOptionsPublish = PETSC_FALSE;
21509573ac7SBarry Smith extern PetscErrorCode PetscSetUseTrMalloc_Private(void);
216ace3abfcSBarry Smith extern PetscBool      petscsetmallocvisited;
217e5c89e4eSSatish Balay static char           emacsmachinename[256];
218e5c89e4eSSatish Balay 
219e5c89e4eSSatish Balay PetscErrorCode (*PetscExternalVersionFunction)(MPI_Comm) = 0;
220e5c89e4eSSatish Balay PetscErrorCode (*PetscExternalHelpFunction)(MPI_Comm)    = 0;
221e5c89e4eSSatish Balay 
222e5c89e4eSSatish Balay #undef __FUNCT__
223e5c89e4eSSatish Balay #define __FUNCT__ "PetscSetHelpVersionFunctions"
224e5c89e4eSSatish Balay /*@C
225e5c89e4eSSatish Balay    PetscSetHelpVersionFunctions - Sets functions that print help and version information
226e5c89e4eSSatish Balay    before the PETSc help and version information is printed. Must call BEFORE PetscInitialize().
227e5c89e4eSSatish Balay    This routine enables a "higher-level" package that uses PETSc to print its messages first.
228e5c89e4eSSatish Balay 
229e5c89e4eSSatish Balay    Input Parameter:
2300298fd71SBarry Smith +  help - the help function (may be NULL)
2310298fd71SBarry Smith -  version - the version function (may be NULL)
232e5c89e4eSSatish Balay 
233e5c89e4eSSatish Balay    Level: developer
234e5c89e4eSSatish Balay 
235e5c89e4eSSatish Balay    Concepts: package help message
236e5c89e4eSSatish Balay 
237e5c89e4eSSatish Balay @*/
2387087cfbeSBarry Smith PetscErrorCode  PetscSetHelpVersionFunctions(PetscErrorCode (*help)(MPI_Comm),PetscErrorCode (*version)(MPI_Comm))
239e5c89e4eSSatish Balay {
240e5c89e4eSSatish Balay   PetscFunctionBegin;
241e5c89e4eSSatish Balay   PetscExternalHelpFunction    = help;
242e5c89e4eSSatish Balay   PetscExternalVersionFunction = version;
243e5c89e4eSSatish Balay   PetscFunctionReturn(0);
244e5c89e4eSSatish Balay }
245e5c89e4eSSatish Balay 
2464b0a73b2SBarry Smith #if defined(PETSC_HAVE_CUDA)
2474b0a73b2SBarry Smith #include <cublas.h>
2484b0a73b2SBarry Smith #endif
2494b0a73b2SBarry Smith 
250e5c89e4eSSatish Balay #undef __FUNCT__
251e5c89e4eSSatish Balay #define __FUNCT__ "PetscOptionsCheckInitial_Private"
2527087cfbeSBarry Smith PetscErrorCode  PetscOptionsCheckInitial_Private(void)
253e5c89e4eSSatish Balay {
254e5c89e4eSSatish Balay   char           string[64],mname[PETSC_MAX_PATH_LEN],*f;
255e5c89e4eSSatish Balay   MPI_Comm       comm = PETSC_COMM_WORLD;
256019f2bb8SSatish Balay   PetscBool      flg1 = PETSC_FALSE,flg2 = PETSC_FALSE,flg3 = PETSC_FALSE,flg4 = PETSC_FALSE,flag;
257e5c89e4eSSatish Balay   PetscErrorCode ierr;
258574034a9SJed Brown   PetscReal      si,logthreshold;
25928559dc8SJed Brown   PetscInt       intensity;
260e5c89e4eSSatish Balay   int            i;
261e5c89e4eSSatish Balay   PetscMPIInt    rank;
262e5c89e4eSSatish Balay   char           version[256];
263e5c89e4eSSatish Balay 
264e5c89e4eSSatish Balay   PetscFunctionBegin;
265e5c89e4eSSatish Balay   ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr);
266e5c89e4eSSatish Balay 
267e5c89e4eSSatish Balay   /*
268e5c89e4eSSatish Balay       Setup the memory management; support for tracing malloc() usage
269e5c89e4eSSatish Balay   */
2700298fd71SBarry Smith   ierr = PetscOptionsHasName(NULL,"-malloc_log",&flg3);CHKERRQ(ierr);
271574034a9SJed Brown   logthreshold = 0.0;
2720298fd71SBarry Smith   ierr = PetscOptionsGetReal(NULL,"-malloc_log_threshold",&logthreshold,&flg1);CHKERRQ(ierr);
273574034a9SJed Brown   if (flg1) flg3 = PETSC_TRUE;
2748bf1f09cSShri Abhyankar #if defined(PETSC_USE_DEBUG)
2750298fd71SBarry Smith   ierr = PetscOptionsGetBool(NULL,"-malloc",&flg1,&flg2);CHKERRQ(ierr);
276e5c89e4eSSatish Balay   if ((!flg2 || flg1) && !petscsetmallocvisited) {
277dc92acbaSJed Brown     if (flg2 || !(PETSC_RUNNING_ON_VALGRIND)) {
278555d055bSBarry Smith       /* turn off default -malloc if valgrind is being used */
279e5c89e4eSSatish Balay       ierr = PetscSetUseTrMalloc_Private();CHKERRQ(ierr);
280555d055bSBarry Smith     }
281e5c89e4eSSatish Balay   }
282e5c89e4eSSatish Balay #else
2830298fd71SBarry Smith   ierr = PetscOptionsGetBool(NULL,"-malloc_dump",&flg1,NULL);CHKERRQ(ierr);
2840298fd71SBarry Smith   ierr = PetscOptionsGetBool(NULL,"-malloc",&flg2,NULL);CHKERRQ(ierr);
285e5c89e4eSSatish Balay   if (flg1 || flg2 || flg3) {ierr = PetscSetUseTrMalloc_Private();CHKERRQ(ierr);}
286e5c89e4eSSatish Balay #endif
287e5c89e4eSSatish Balay   if (flg3) {
288574034a9SJed Brown     ierr = PetscMallocSetDumpLogThreshold((PetscLogDouble)logthreshold);CHKERRQ(ierr);
289e5c89e4eSSatish Balay   }
29090d69ab7SBarry Smith   flg1 = PETSC_FALSE;
2910298fd71SBarry Smith   ierr = PetscOptionsGetBool(NULL,"-malloc_debug",&flg1,NULL);CHKERRQ(ierr);
292e5c89e4eSSatish Balay   if (flg1) {
293e5c89e4eSSatish Balay     ierr = PetscSetUseTrMalloc_Private();CHKERRQ(ierr);
294e5c89e4eSSatish Balay     ierr = PetscMallocDebug(PETSC_TRUE);CHKERRQ(ierr);
295e5c89e4eSSatish Balay   }
296dc92acbaSJed Brown   flg1 = PETSC_FALSE;
2970298fd71SBarry Smith   ierr = PetscOptionsGetBool(NULL,"-malloc_test",&flg1,NULL);CHKERRQ(ierr);
2988bf1f09cSShri Abhyankar #if defined(PETSC_USE_DEBUG)
299dc92acbaSJed Brown   if (flg1 && !PETSC_RUNNING_ON_VALGRIND) {
300dc92acbaSJed Brown     ierr = PetscSetUseTrMalloc_Private();CHKERRQ(ierr);
301dc92acbaSJed Brown     ierr = PetscMallocSetDumpLog();CHKERRQ(ierr);
302dc92acbaSJed Brown     ierr = PetscMallocDebug(PETSC_TRUE);CHKERRQ(ierr);
303dc92acbaSJed Brown   }
304dc92acbaSJed Brown #endif
305e5c89e4eSSatish Balay 
30690d69ab7SBarry Smith   flg1 = PETSC_FALSE;
3070298fd71SBarry Smith   ierr = PetscOptionsGetBool(NULL,"-malloc_info",&flg1,NULL);CHKERRQ(ierr);
3087783f70dSSatish Balay   if (!flg1) {
30990d69ab7SBarry Smith     flg1 = PETSC_FALSE;
3100298fd71SBarry Smith     ierr = PetscOptionsGetBool(NULL,"-memory_info",&flg1,NULL);CHKERRQ(ierr);
3117783f70dSSatish Balay   }
312e5c89e4eSSatish Balay   if (flg1) {
313e5c89e4eSSatish Balay     ierr = PetscMemorySetGetMaximumUsage();CHKERRQ(ierr);
314e5c89e4eSSatish Balay   }
315e5c89e4eSSatish Balay 
316e5c89e4eSSatish Balay   /*
317e5c89e4eSSatish Balay       Set the display variable for graphics
318e5c89e4eSSatish Balay   */
319e5c89e4eSSatish Balay   ierr = PetscSetDisplay();CHKERRQ(ierr);
320e5c89e4eSSatish Balay 
32151dcc849SKerry Stevens   /*
322e5c89e4eSSatish Balay       Print the PETSc version information
323e5c89e4eSSatish Balay   */
3240298fd71SBarry Smith   ierr = PetscOptionsHasName(NULL,"-v",&flg1);CHKERRQ(ierr);
3250298fd71SBarry Smith   ierr = PetscOptionsHasName(NULL,"-version",&flg2);CHKERRQ(ierr);
3260298fd71SBarry Smith   ierr = PetscOptionsHasName(NULL,"-help",&flg3);CHKERRQ(ierr);
327e5c89e4eSSatish Balay   if (flg1 || flg2 || flg3) {
328e5c89e4eSSatish Balay 
329e5c89e4eSSatish Balay     /*
330e5c89e4eSSatish Balay        Print "higher-level" package version message
331e5c89e4eSSatish Balay     */
332e5c89e4eSSatish Balay     if (PetscExternalVersionFunction) {
333e5c89e4eSSatish Balay       ierr = (*PetscExternalVersionFunction)(comm);CHKERRQ(ierr);
334e5c89e4eSSatish Balay     }
335e5c89e4eSSatish Balay 
336a523d312SBarry Smith     ierr = PetscGetVersion(version,256);CHKERRQ(ierr);
337e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm,"--------------------------------------------\
338e5c89e4eSSatish Balay ------------------------------\n");CHKERRQ(ierr);
339e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm,"%s\n",version);CHKERRQ(ierr);
340e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm,"%s",PETSC_AUTHOR_INFO);CHKERRQ(ierr);
341e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm,"See docs/changes/index.html for recent updates.\n");CHKERRQ(ierr);
34284e42920SBarry Smith     ierr = (*PetscHelpPrintf)(comm,"See docs/faq.html for problems.\n");CHKERRQ(ierr);
343e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm,"See docs/manualpages/index.html for help. \n");CHKERRQ(ierr);
344e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm,"Libraries linked from %s\n",PETSC_LIB_DIR);CHKERRQ(ierr);
345e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm,"--------------------------------------------\
346e5c89e4eSSatish Balay ------------------------------\n");CHKERRQ(ierr);
347e5c89e4eSSatish Balay   }
348e5c89e4eSSatish Balay 
349e5c89e4eSSatish Balay   /*
350e5c89e4eSSatish Balay        Print "higher-level" package help message
351e5c89e4eSSatish Balay   */
352e5c89e4eSSatish Balay   if (flg3) {
353e5c89e4eSSatish Balay     if (PetscExternalHelpFunction) {
354e5c89e4eSSatish Balay       ierr = (*PetscExternalHelpFunction)(comm);CHKERRQ(ierr);
355e5c89e4eSSatish Balay     }
356e5c89e4eSSatish Balay   }
357e5c89e4eSSatish Balay 
358e5c89e4eSSatish Balay   /*
359e5c89e4eSSatish Balay       Setup the error handling
360e5c89e4eSSatish Balay   */
36190d69ab7SBarry Smith   flg1 = PETSC_FALSE;
3620298fd71SBarry Smith   ierr = PetscOptionsGetBool(NULL,"-on_error_abort",&flg1,NULL);CHKERRQ(ierr);
363b59baad1SJed Brown   if (flg1) {
364d54338ecSKarl Rupp     ierr = MPI_Comm_set_errhandler(PETSC_COMM_WORLD,MPI_ERRORS_ARE_FATAL);CHKERRQ(ierr);
365b59baad1SJed Brown     ierr = PetscPushErrorHandler(PetscAbortErrorHandler,0);CHKERRQ(ierr);
366b59baad1SJed Brown   }
36790d69ab7SBarry Smith   flg1 = PETSC_FALSE;
3680298fd71SBarry Smith   ierr = PetscOptionsGetBool(NULL,"-on_error_mpiabort",&flg1,NULL);CHKERRQ(ierr);
369cb9801acSJed Brown   if (flg1) { ierr = PetscPushErrorHandler(PetscMPIAbortErrorHandler,0);CHKERRQ(ierr);}
37090d69ab7SBarry Smith   flg1 = PETSC_FALSE;
3710298fd71SBarry Smith   ierr = PetscOptionsGetBool(NULL,"-mpi_return_on_error",&flg1,NULL);CHKERRQ(ierr);
372e5c89e4eSSatish Balay   if (flg1) {
373d54338ecSKarl Rupp     ierr = MPI_Comm_set_errhandler(comm,MPI_ERRORS_RETURN);CHKERRQ(ierr);
374e5c89e4eSSatish Balay   }
37590d69ab7SBarry Smith   flg1 = PETSC_FALSE;
3760298fd71SBarry Smith   ierr = PetscOptionsGetBool(NULL,"-no_signal_handler",&flg1,NULL);CHKERRQ(ierr);
3778d359177SBarry Smith   if (!flg1) {ierr = PetscPushSignalHandler(PetscSignalHandlerDefault,(void*)0);CHKERRQ(ierr);}
37896cc47afSJed Brown   flg1 = PETSC_FALSE;
3790298fd71SBarry Smith   ierr = PetscOptionsGetBool(NULL,"-fp_trap",&flg1,NULL);CHKERRQ(ierr);
38096cc47afSJed Brown   if (flg1) {ierr = PetscSetFPTrap(PETSC_FP_TRAP_ON);CHKERRQ(ierr);}
38128559dc8SJed Brown   ierr = PetscOptionsGetInt(NULL,"-check_pointer_intensity",&intensity,&flag);CHKERRQ(ierr);
38228559dc8SJed Brown   if (flag) {ierr = PetscCheckPointerSetIntensity(intensity);CHKERRQ(ierr);}
383e5c89e4eSSatish Balay 
384e5c89e4eSSatish Balay   /*
385e5c89e4eSSatish Balay       Setup debugger information
386e5c89e4eSSatish Balay   */
387e5c89e4eSSatish Balay   ierr = PetscSetDefaultDebugger();CHKERRQ(ierr);
3880298fd71SBarry Smith   ierr = PetscOptionsGetString(NULL,"-on_error_attach_debugger",string,64,&flg1);CHKERRQ(ierr);
389e5c89e4eSSatish Balay   if (flg1) {
390e5c89e4eSSatish Balay     MPI_Errhandler err_handler;
391e5c89e4eSSatish Balay 
392e5c89e4eSSatish Balay     ierr = PetscSetDebuggerFromString(string);CHKERRQ(ierr);
393d54338ecSKarl Rupp     ierr = MPI_Comm_create_errhandler((MPI_Handler_function*)Petsc_MPI_DebuggerOnError,&err_handler);CHKERRQ(ierr);
394d54338ecSKarl Rupp     ierr = MPI_Comm_set_errhandler(comm,err_handler);CHKERRQ(ierr);
395e5c89e4eSSatish Balay     ierr = PetscPushErrorHandler(PetscAttachDebuggerErrorHandler,0);CHKERRQ(ierr);
396e5c89e4eSSatish Balay   }
3970298fd71SBarry Smith   ierr = PetscOptionsGetString(NULL,"-debug_terminal",string,64,&flg1);CHKERRQ(ierr);
3985e96ac45SJed Brown   if (flg1) { ierr = PetscSetDebugTerminal(string);CHKERRQ(ierr); }
3990298fd71SBarry Smith   ierr = PetscOptionsGetString(NULL,"-start_in_debugger",string,64,&flg1);CHKERRQ(ierr);
4000298fd71SBarry Smith   ierr = PetscOptionsGetString(NULL,"-stop_for_debugger",string,64,&flg2);CHKERRQ(ierr);
401e5c89e4eSSatish Balay   if (flg1 || flg2) {
402e5c89e4eSSatish Balay     PetscMPIInt    size;
403e5c89e4eSSatish Balay     PetscInt       lsize,*nodes;
404e5c89e4eSSatish Balay     MPI_Errhandler err_handler;
405e5c89e4eSSatish Balay     /*
406e5c89e4eSSatish Balay        we have to make sure that all processors have opened
407e5c89e4eSSatish Balay        connections to all other processors, otherwise once the
408e5c89e4eSSatish Balay        debugger has stated it is likely to receive a SIGUSR1
409e5c89e4eSSatish Balay        and kill the program.
410e5c89e4eSSatish Balay     */
411e5c89e4eSSatish Balay     ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRQ(ierr);
412e5c89e4eSSatish Balay     if (size > 2) {
413533163c2SBarry Smith       PetscMPIInt dummy = 0;
414e5c89e4eSSatish Balay       MPI_Status  status;
415e5c89e4eSSatish Balay       for (i=0; i<size; i++) {
416e5c89e4eSSatish Balay         if (rank != i) {
417e5c89e4eSSatish Balay           ierr = MPI_Send(&dummy,1,MPI_INT,i,109,PETSC_COMM_WORLD);CHKERRQ(ierr);
418e5c89e4eSSatish Balay         }
419e5c89e4eSSatish Balay       }
420e5c89e4eSSatish Balay       for (i=0; i<size; i++) {
421e5c89e4eSSatish Balay         if (rank != i) {
422e5c89e4eSSatish Balay           ierr = MPI_Recv(&dummy,1,MPI_INT,i,109,PETSC_COMM_WORLD,&status);CHKERRQ(ierr);
423e5c89e4eSSatish Balay         }
424e5c89e4eSSatish Balay       }
425e5c89e4eSSatish Balay     }
426e5c89e4eSSatish Balay     /* check if this processor node should be in debugger */
427785e854fSJed Brown     ierr  = PetscMalloc1(size,&nodes);CHKERRQ(ierr);
428e5c89e4eSSatish Balay     lsize = size;
4290298fd71SBarry Smith     ierr  = PetscOptionsGetIntArray(NULL,"-debugger_nodes",nodes,&lsize,&flag);CHKERRQ(ierr);
430e5c89e4eSSatish Balay     if (flag) {
431e5c89e4eSSatish Balay       for (i=0; i<lsize; i++) {
432e5c89e4eSSatish Balay         if (nodes[i] == rank) { flag = PETSC_FALSE; break; }
433e5c89e4eSSatish Balay       }
434e5c89e4eSSatish Balay     }
435e5c89e4eSSatish Balay     if (!flag) {
436e5c89e4eSSatish Balay       ierr = PetscSetDebuggerFromString(string);CHKERRQ(ierr);
437e5c89e4eSSatish Balay       ierr = PetscPushErrorHandler(PetscAbortErrorHandler,0);CHKERRQ(ierr);
438e5c89e4eSSatish Balay       if (flg1) {
439e5c89e4eSSatish Balay         ierr = PetscAttachDebugger();CHKERRQ(ierr);
440e5c89e4eSSatish Balay       } else {
441e5c89e4eSSatish Balay         ierr = PetscStopForDebugger();CHKERRQ(ierr);
442e5c89e4eSSatish Balay       }
443d54338ecSKarl Rupp       ierr = MPI_Comm_create_errhandler((MPI_Handler_function*)Petsc_MPI_AbortOnError,&err_handler);CHKERRQ(ierr);
444d54338ecSKarl Rupp       ierr = MPI_Comm_set_errhandler(comm,err_handler);CHKERRQ(ierr);
445e5c89e4eSSatish Balay     }
446e5c89e4eSSatish Balay     ierr = PetscFree(nodes);CHKERRQ(ierr);
447e5c89e4eSSatish Balay   }
448e5c89e4eSSatish Balay 
4490298fd71SBarry Smith   ierr = PetscOptionsGetString(NULL,"-on_error_emacs",emacsmachinename,128,&flg1);CHKERRQ(ierr);
450cb9801acSJed Brown   if (flg1 && !rank) {ierr = PetscPushErrorHandler(PetscEmacsClientErrorHandler,emacsmachinename);CHKERRQ(ierr);}
451e5c89e4eSSatish Balay 
452e5c89e4eSSatish Balay   /*
453e5c89e4eSSatish Balay         Setup profiling and logging
454e5c89e4eSSatish Balay   */
4556cf91177SBarry Smith #if defined(PETSC_USE_INFO)
4568bb29257SSatish Balay   {
457e5c89e4eSSatish Balay     char logname[PETSC_MAX_PATH_LEN]; logname[0] = 0;
4580298fd71SBarry Smith     ierr = PetscOptionsGetString(NULL,"-info",logname,250,&flg1);CHKERRQ(ierr);
4598bb29257SSatish Balay     if (flg1 && logname[0]) {
460fcc2139eSBarry Smith       ierr = PetscInfoAllow(PETSC_TRUE,logname);CHKERRQ(ierr);
4618bb29257SSatish Balay     } else if (flg1) {
4620298fd71SBarry Smith       ierr = PetscInfoAllow(PETSC_TRUE,NULL);CHKERRQ(ierr);
463e5c89e4eSSatish Balay     }
464e5c89e4eSSatish Balay   }
465865f6aa8SSatish Balay #endif
466865f6aa8SSatish Balay #if defined(PETSC_USE_LOG)
467865f6aa8SSatish Balay   mname[0] = 0;
4680298fd71SBarry Smith   ierr = PetscOptionsGetString(NULL,"-history",mname,PETSC_MAX_PATH_LEN,&flg1);CHKERRQ(ierr);
469865f6aa8SSatish Balay   if (flg1) {
470865f6aa8SSatish Balay     if (mname[0]) {
471f3dea69dSBarry Smith       ierr = PetscOpenHistoryFile(mname,&petsc_history);CHKERRQ(ierr);
472865f6aa8SSatish Balay     } else {
473706d7a88SBarry Smith       ierr = PetscOpenHistoryFile(NULL,&petsc_history);CHKERRQ(ierr);
474865f6aa8SSatish Balay     }
475865f6aa8SSatish Balay   }
476e5c89e4eSSatish Balay #if defined(PETSC_HAVE_MPE)
47790d69ab7SBarry Smith   flg1 = PETSC_FALSE;
4780298fd71SBarry Smith   ierr = PetscOptionsHasName(NULL,"-log_mpe",&flg1);CHKERRQ(ierr);
479495fc317SBarry Smith   if (flg1) {ierr = PetscLogMPEBegin();CHKERRQ(ierr);}
480e5c89e4eSSatish Balay #endif
48190d69ab7SBarry Smith   flg1 = PETSC_FALSE;
48290d69ab7SBarry Smith   flg2 = PETSC_FALSE;
48390d69ab7SBarry Smith   flg3 = PETSC_FALSE;
4840298fd71SBarry Smith   ierr = PetscOptionsGetBool(NULL,"-log_all",&flg1,NULL);CHKERRQ(ierr);
4850298fd71SBarry Smith   ierr = PetscOptionsGetBool(NULL,"-log",&flg2,NULL);CHKERRQ(ierr);
4860298fd71SBarry Smith   ierr = PetscOptionsHasName(NULL,"-log_summary",&flg3);CHKERRQ(ierr);
487f14045dbSBarry Smith   ierr = PetscOptionsHasName(NULL,"-log_view",&flg4);CHKERRQ(ierr);
488e5c89e4eSSatish Balay   if (flg1)                      { ierr = PetscLogAllBegin();CHKERRQ(ierr); }
4899f7b6320SBarry Smith   else if (flg2 || flg3 || flg4) { ierr = PetscLogBegin();CHKERRQ(ierr);}
490e5c89e4eSSatish Balay 
4910298fd71SBarry Smith   ierr = PetscOptionsGetString(NULL,"-log_trace",mname,250,&flg1);CHKERRQ(ierr);
492e5c89e4eSSatish Balay   if (flg1) {
493e5c89e4eSSatish Balay     char name[PETSC_MAX_PATH_LEN],fname[PETSC_MAX_PATH_LEN];
494e5c89e4eSSatish Balay     FILE *file;
495e5c89e4eSSatish Balay     if (mname[0]) {
496e5c89e4eSSatish Balay       sprintf(name,"%s.%d",mname,rank);
497e5c89e4eSSatish Balay       ierr = PetscFixFilename(name,fname);CHKERRQ(ierr);
498e5c89e4eSSatish Balay       file = fopen(fname,"w");
499f3dea69dSBarry Smith       if (!file) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_FILE_OPEN,"Unable to open trace file: %s",fname);
500a297a907SKarl Rupp     } else file = PETSC_STDOUT;
501a297a907SKarl Rupp 
502e5c89e4eSSatish Balay     ierr = PetscLogTraceBegin(file);CHKERRQ(ierr);
503e5c89e4eSSatish Balay   }
504e5c89e4eSSatish Balay #endif
505e5c89e4eSSatish Balay 
506e78c4b8cSBarry Smith   ierr = PetscOptionsGetBool(NULL,"-saws_options",&PetscOptionsPublish,NULL);CHKERRQ(ierr);
507e5c89e4eSSatish Balay 
5084b0a73b2SBarry Smith #if defined(PETSC_HAVE_CUDA)
5090298fd71SBarry Smith   ierr = PetscOptionsHasName(NULL,"-cuda_show_devices",&flg1);CHKERRQ(ierr);
5104b0a73b2SBarry Smith   if (flg1) {
5114b0a73b2SBarry Smith     struct cudaDeviceProp prop;
5124b0a73b2SBarry Smith     int                   devCount;
5134b0a73b2SBarry Smith     int                   device;
5142692e278SPaul Mullowney     cudaError_t           err = cudaSuccess;
5152692e278SPaul Mullowney     err = cudaGetDeviceCount(&devCount);
5162692e278SPaul Mullowney     if (err != cudaSuccess)
5172692e278SPaul Mullowney       SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SYS,"error in cudaGetDeviceCount %s",cudaGetErrorString(err));
5184b0a73b2SBarry Smith     for (device = 0; device < devCount; ++device) {
5192692e278SPaul Mullowney       err = cudaGetDeviceProperties(&prop, device);
5202692e278SPaul Mullowney       if (err != cudaSuccess)
5212692e278SPaul Mullowney         SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SYS,"error in cudaGetDeviceProperties %s",cudaGetErrorString(err));
5224b0a73b2SBarry Smith       ierr = PetscPrintf(PETSC_COMM_WORLD, "CUDA device %d: %s\n", device, prop.name);CHKERRQ(ierr);
5234b0a73b2SBarry Smith     }
5244b0a73b2SBarry Smith   }
5254b0a73b2SBarry Smith   {
526bd72cc96SPaul Mullowney     int size;
527bd72cc96SPaul Mullowney     ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRQ(ierr);
528bd72cc96SPaul Mullowney     if (size>1) {
529bd72cc96SPaul Mullowney       int devCount, device, rank;
5302692e278SPaul Mullowney       cudaError_t err = cudaSuccess;
5312692e278SPaul Mullowney 
5322692e278SPaul Mullowney       /* check to see if we force multiple ranks to hit the same GPU */
5332692e278SPaul Mullowney       ierr = PetscOptionsGetInt(NULL,"-cuda_set_device", &device, &flg1);CHKERRQ(ierr);
5342692e278SPaul Mullowney       if (flg1) {
5352692e278SPaul Mullowney         ierr = cudaSetDevice(device);CHKERRQ(ierr);
5362692e278SPaul Mullowney         if (err != cudaSuccess)
5372692e278SPaul Mullowney           SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SYS,"error in cudaSetDevice %s",cudaGetErrorString(err));
5382692e278SPaul Mullowney       } else {
5392692e278SPaul Mullowney         /* we're not using the same GPU on multiple MPI threads. So try to allocated different
5402692e278SPaul Mullowney          GPUs to different threads */
5412692e278SPaul Mullowney 
5422692e278SPaul Mullowney         /* First get the device count */
5432692e278SPaul Mullowney         err   = cudaGetDeviceCount(&devCount);CHKERRQ(ierr);
5442692e278SPaul Mullowney         if (err != cudaSuccess)
5452692e278SPaul Mullowney           SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SYS,"error in cudaGetDeviceCount %s",cudaGetErrorString(err));
5462692e278SPaul Mullowney 
5472692e278SPaul Mullowney         /* next determine the rank and then set the device via a mod */
548bd72cc96SPaul Mullowney         ierr   = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr);
549bd72cc96SPaul Mullowney         device = rank % devCount;
5502692e278SPaul Mullowney         err   = cudaSetDevice(device);
5512692e278SPaul Mullowney         if (err != cudaSuccess)
5522692e278SPaul Mullowney           SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SYS,"error in cudaSetDevice %s",cudaGetErrorString(err));
5532692e278SPaul Mullowney       }
5542692e278SPaul Mullowney 
5552692e278SPaul Mullowney       /* set the device flags so that it can map host memory ... do NOT throw exception on err!=cudaSuccess
5562692e278SPaul Mullowney        multiple devices may try to set the flags on the same device. So long as one of them succeeds, things
5572692e278SPaul Mullowney        are ok. */
5582692e278SPaul Mullowney       err = cudaSetDeviceFlags(cudaDeviceMapHost);
5592692e278SPaul Mullowney 
560a297a907SKarl Rupp     } else {
5614b0a73b2SBarry Smith       int device;
5622692e278SPaul Mullowney       cudaError_t err = cudaSuccess;
5632692e278SPaul Mullowney 
564f297a14cSJed Brown       /* the code below works for serial GPU simulations */
5650298fd71SBarry Smith       ierr = PetscOptionsGetInt(NULL,"-cuda_set_device", &device, &flg1);CHKERRQ(ierr);
5664b0a73b2SBarry Smith       if (flg1) {
5674b0a73b2SBarry Smith         ierr = cudaSetDevice(device);CHKERRQ(ierr);
5684b0a73b2SBarry Smith       }
5692692e278SPaul Mullowney 
5702692e278SPaul Mullowney       /* set the device flags so that it can map host memory ... here, we error check. */
5712692e278SPaul Mullowney       err = cudaSetDeviceFlags(cudaDeviceMapHost);
5722692e278SPaul Mullowney       if (err != cudaSuccess)
5732692e278SPaul Mullowney         SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SYS,"error in cudaSetDevice %s",cudaGetErrorString(err));
5744b0a73b2SBarry Smith     }
575bd72cc96SPaul Mullowney   }
5764b0a73b2SBarry Smith #endif
5774b0a73b2SBarry Smith 
5784b0a73b2SBarry Smith 
579e5c89e4eSSatish Balay   /*
580e5c89e4eSSatish Balay        Print basic help message
581e5c89e4eSSatish Balay   */
5820298fd71SBarry Smith   ierr = PetscOptionsHasName(NULL,"-help",&flg1);CHKERRQ(ierr);
583e5c89e4eSSatish Balay   if (flg1) {
584e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm,"Options for all PETSc programs:\n");CHKERRQ(ierr);
585301d30feSBarry Smith     ierr = (*PetscHelpPrintf)(comm," -help: prints help method for each option\n");CHKERRQ(ierr);
586301d30feSBarry Smith     ierr = (*PetscHelpPrintf)(comm," -on_error_abort: cause an abort when an error is detected. Useful \n ");CHKERRQ(ierr);
587301d30feSBarry Smith     ierr = (*PetscHelpPrintf)(comm,"       only when run in the debugger\n");CHKERRQ(ierr);
588e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -on_error_attach_debugger [gdb,dbx,xxgdb,ups,noxterm]\n");CHKERRQ(ierr);
589e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm,"       start the debugger in new xterm\n");CHKERRQ(ierr);
590e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm,"       unless noxterm is given\n");CHKERRQ(ierr);
591e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -start_in_debugger [gdb,dbx,xxgdb,ups,noxterm]\n");CHKERRQ(ierr);
592e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm,"       start all processes in the debugger\n");CHKERRQ(ierr);
593e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -on_error_emacs <machinename>\n");CHKERRQ(ierr);
594e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm,"    emacs jumps to error file\n");CHKERRQ(ierr);
595e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -debugger_nodes [n1,n2,..] Nodes to start in debugger\n");CHKERRQ(ierr);
596e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -debugger_pause [m] : delay (in seconds) to attach debugger\n");CHKERRQ(ierr);
597e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -stop_for_debugger : prints message on how to attach debugger manually\n");CHKERRQ(ierr);
598e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm,"                      waits the delay for you to attach\n");CHKERRQ(ierr);
5991cda70a7SBarry Smith     ierr = (*PetscHelpPrintf)(comm," -display display: Location where X window graphics and debuggers are displayed\n");CHKERRQ(ierr);
600e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -no_signal_handler: do not trap error signals\n");CHKERRQ(ierr);
601e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -mpi_return_on_error: MPI returns error code, rather than abort on internal error\n");CHKERRQ(ierr);
602e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -fp_trap: stop on floating point exceptions\n");CHKERRQ(ierr);
603e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm,"           note on IBM RS6000 this slows run greatly\n");CHKERRQ(ierr);
604e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -malloc_dump <optional filename>: dump list of unfreed memory at conclusion\n");CHKERRQ(ierr);
605e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -malloc: use our error checking malloc\n");CHKERRQ(ierr);
606e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -malloc no: don't use error checking malloc\n");CHKERRQ(ierr);
6074161f2a3SBarry Smith     ierr = (*PetscHelpPrintf)(comm," -malloc_info: prints total memory usage\n");CHKERRQ(ierr);
6084161f2a3SBarry Smith     ierr = (*PetscHelpPrintf)(comm," -malloc_log: keeps log of all memory allocations\n");CHKERRQ(ierr);
609e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -malloc_debug: enables extended checking for memory corruption\n");CHKERRQ(ierr);
610e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -options_table: dump list of options inputted\n");CHKERRQ(ierr);
611e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -options_left: dump list of unused options\n");CHKERRQ(ierr);
612e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -options_left no: don't dump list of unused options\n");CHKERRQ(ierr);
613e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -tmp tmpdir: alternative /tmp directory\n");CHKERRQ(ierr);
614e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -shared_tmp: tmp directory is shared by all processors\n");CHKERRQ(ierr);
615a8c7a070SBarry Smith     ierr = (*PetscHelpPrintf)(comm," -not_shared_tmp: each processor has separate tmp directory\n");CHKERRQ(ierr);
616e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -memory_info: print memory usage at end of run\n");CHKERRQ(ierr);
61740ab9619SBarry Smith     ierr = (*PetscHelpPrintf)(comm," -server <port>: Run PETSc webserver (default port is 8080) see PetscWebServe()\n");CHKERRQ(ierr);
618e5c89e4eSSatish Balay #if defined(PETSC_USE_LOG)
619e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -get_total_flops: total flops over all processors\n");CHKERRQ(ierr);
620a64a8e02SBarry Smith     ierr = (*PetscHelpPrintf)(comm," -log[_summary _summary_python]: logging objects and events\n");CHKERRQ(ierr);
621e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -log_trace [filename]: prints trace of all PETSc calls\n");CHKERRQ(ierr);
622e5c89e4eSSatish Balay #if defined(PETSC_HAVE_MPE)
623495fc317SBarry Smith     ierr = (*PetscHelpPrintf)(comm," -log_mpe: Also create logfile viewable through Jumpshot\n");CHKERRQ(ierr);
624e5c89e4eSSatish Balay #endif
6256cf91177SBarry Smith     ierr = (*PetscHelpPrintf)(comm," -info <optional filename>: print informative messages about the calculations\n");CHKERRQ(ierr);
626e5c89e4eSSatish Balay #endif
627e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -v: prints PETSc version number and release date\n");CHKERRQ(ierr);
628e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -options_file <file>: reads options from file\n");CHKERRQ(ierr);
629e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm," -petsc_sleep n: sleeps n seconds before running program\n");CHKERRQ(ierr);
630e5c89e4eSSatish Balay     ierr = (*PetscHelpPrintf)(comm,"-----------------------------------------------\n");CHKERRQ(ierr);
631e5c89e4eSSatish Balay   }
632e5c89e4eSSatish Balay 
63374ba8654SBarry Smith #if defined(PETSC_HAVE_POPEN)
63474ba8654SBarry Smith   {
63574ba8654SBarry Smith   char machine[128];
63674ba8654SBarry Smith   ierr = PetscOptionsGetString(NULL,"-popen_machine",machine,128,&flg1);CHKERRQ(ierr);
63774ba8654SBarry Smith   if (flg1) {
63874ba8654SBarry Smith     ierr = PetscPOpenSetMachine(machine);CHKERRQ(ierr);
63974ba8654SBarry Smith   }
64074ba8654SBarry Smith   }
64174ba8654SBarry Smith #endif
64274ba8654SBarry Smith 
6430298fd71SBarry Smith   ierr = PetscOptionsGetReal(NULL,"-petsc_sleep",&si,&flg1);CHKERRQ(ierr);
644e5c89e4eSSatish Balay   if (flg1) {
645e5c89e4eSSatish Balay     ierr = PetscSleep(si);CHKERRQ(ierr);
646e5c89e4eSSatish Balay   }
647e5c89e4eSSatish Balay 
6480298fd71SBarry Smith   ierr = PetscOptionsGetString(NULL,"-info_exclude",mname,PETSC_MAX_PATH_LEN,&flg1);CHKERRQ(ierr);
649e5c89e4eSSatish Balay   ierr = PetscStrstr(mname,"null",&f);CHKERRQ(ierr);
650e5c89e4eSSatish Balay   if (f) {
651ecd8bba6SJed Brown     ierr = PetscInfoDeactivateClass(0);CHKERRQ(ierr);
652e5c89e4eSSatish Balay   }
653827f890bSBarry Smith 
654f14045dbSBarry Smith #if defined(PETSC_HAVE_CUSP) || defined(PETSC_HAVE_VIENNACL)
6550298fd71SBarry Smith   ierr = PetscOptionsHasName(NULL,"-log_summary",&flg3);CHKERRQ(ierr);
656f14045dbSBarry Smith   if (!flg3) {
657f14045dbSBarry Smith   ierr = PetscOptionsHasName(NULL,"-log_view",&flg3);CHKERRQ(ierr);
658f14045dbSBarry Smith   }
659bab1f7e6SVictor Minden #endif
660f14045dbSBarry Smith #if defined(PETSC_HAVE_CUSP)
661f14045dbSBarry Smith   ierr = PetscOptionsGetBool(NULL,"-cusp_synchronize",&flg3,NULL);CHKERRQ(ierr);
662f14045dbSBarry Smith   PetscCUSPSynchronize = flg3;
663f14045dbSBarry Smith #elif defined(PETSC_HAVE_VIENNACL)
664f14045dbSBarry Smith   ierr = PetscOptionsGetBool(NULL,"-viennacl_synchronize",&flg3,NULL);CHKERRQ(ierr);
665f14045dbSBarry Smith   PetscViennaCLSynchronize = flg3;
6664cf1874eSKarl Rupp #endif
667e5c89e4eSSatish Balay   PetscFunctionReturn(0);
668e5c89e4eSSatish Balay }
669df413903SBarry Smith 
670