1e5c89e4eSSatish Balay /* 2e5c89e4eSSatish Balay 3e5c89e4eSSatish Balay This file defines part of the initialization of PETSc 4e5c89e4eSSatish Balay 5f2d66bcaSShri Abhyankar This file uses regular malloc and free because it cannot known 6e5c89e4eSSatish Balay what malloc is being used until it has already processed the input. 7e5c89e4eSSatish Balay */ 8ef386f4bSSatish Balay 9ef386f4bSSatish Balay #include <petscsys.h> /*I "petscsys.h" I*/ 10665c2dedSJed Brown #include <petscviewer.h> 11ef386f4bSSatish Balay 12ba61063dSBarry Smith #if defined(PETSC_HAVE_SYS_SYSINFO_H) 1351d315f7SKerry Stevens #include <sys/sysinfo.h> 14ba61063dSBarry Smith #endif 15121deb67SSatish Balay #if defined(PETSC_HAVE_UNISTD_H) 1651d315f7SKerry Stevens #include <unistd.h> 17121deb67SSatish Balay #endif 18555d055bSBarry Smith 19e5c89e4eSSatish Balay /* ------------------------Nasty global variables -------------------------------*/ 20e5c89e4eSSatish Balay /* 21e5c89e4eSSatish Balay Indicates if PETSc started up MPI, or it was 22e5c89e4eSSatish Balay already started before PETSc was initialized. 23e5c89e4eSSatish Balay */ 240cbf60d0SJose E. Roman PetscBool PetscBeganMPI = PETSC_FALSE; 250cbf60d0SJose E. Roman PetscBool PetscInitializeCalled = PETSC_FALSE; 260cbf60d0SJose E. Roman PetscBool PetscFinalizeCalled = PETSC_FALSE; 27d6f2c3cbSBarry Smith 287087cfbeSBarry Smith PetscMPIInt PetscGlobalRank = -1; 297087cfbeSBarry Smith PetscMPIInt PetscGlobalSize = -1; 30ba61063dSBarry Smith 3150f81f78SJed Brown #if defined(PETSC_HAVE_COMPLEX) 32e5c89e4eSSatish Balay #if defined(PETSC_COMPLEX_INSTANTIATE) 33e5c89e4eSSatish Balay template <> class std::complex<double>; /* instantiate complex template class */ 34e5c89e4eSSatish Balay #endif 352c876bd9SBarry Smith #if !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX) 36500d8756SSatish Balay MPI_Datatype MPIU_C_DOUBLE_COMPLEX; 37500d8756SSatish Balay MPI_Datatype MPIU_C_COMPLEX; 382c876bd9SBarry Smith #endif 398619c96cSJed Brown 408619c96cSJed Brown /*MC 418619c96cSJed Brown PETSC_i - the imaginary number i 428619c96cSJed Brown 438619c96cSJed Brown Synopsis: 448619c96cSJed Brown #include <petscsys.h> 458619c96cSJed Brown PetscComplex PETSC_i; 468619c96cSJed Brown 478619c96cSJed Brown Level: beginner 488619c96cSJed Brown 498619c96cSJed Brown Note: 50*8cd53115SBarry Smith Complex numbers are automatically available if PETSc located a working complex implementation 518619c96cSJed Brown 528619c96cSJed Brown .seealso: PetscRealPart(), PetscImaginaryPart(), PetscRealPartComplex(), PetscImaginaryPartComplex() 538619c96cSJed Brown M*/ 5450f81f78SJed Brown PetscComplex PETSC_i; 55e5c89e4eSSatish Balay #endif 56ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) 57c90a1750SBarry Smith MPI_Datatype MPIU___FLOAT128 = 0; 587c2de775SJed Brown #if defined(PETSC_HAVE_COMPLEX) 598c764dc5SJose Roman MPI_Datatype MPIU___COMPLEX128 = 0; 608c764dc5SJose Roman #endif 61c90a1750SBarry Smith #endif 627087cfbeSBarry Smith MPI_Datatype MPIU_2SCALAR = 0; 6344041f26SJed Brown #if defined(PETSC_USE_64BIT_INDICES) || !defined(MPI_2INT) 647087cfbeSBarry Smith MPI_Datatype MPIU_2INT = 0; 6544041f26SJed Brown #endif 668ad47952SJed Brown MPI_Datatype MPIU_BOOL; 678ad47952SJed Brown MPI_Datatype MPIU_ENUM; 6875567043SBarry Smith 69e5c89e4eSSatish Balay /* 70e5c89e4eSSatish Balay Function that is called to display all error messages 71e5c89e4eSSatish Balay */ 727087cfbeSBarry Smith PetscErrorCode (*PetscErrorPrintf)(const char [],...) = PetscErrorPrintfDefault; 737087cfbeSBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char [],...) = PetscHelpPrintfDefault; 74238ccf28SShri Abhyankar #if defined(PETSC_HAVE_MATLAB_ENGINE) 757087cfbeSBarry Smith PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list) = PetscVFPrintf_Matlab; 76238ccf28SShri Abhyankar #else 777087cfbeSBarry Smith PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list) = PetscVFPrintfDefault; 78238ccf28SShri Abhyankar #endif 79bab1f7e6SVictor Minden /* 804cf1874eSKarl Rupp This is needed to turn on/off GPU synchronization 818b5db460SBarry Smith */ 828b5db460SBarry Smith PetscBool PetscCUSPSynchronize = PETSC_FALSE; 834cf1874eSKarl Rupp PetscBool PetscViennaCLSynchronize = PETSC_FALSE; 84bab1f7e6SVictor Minden 85e5c89e4eSSatish Balay /* ------------------------------------------------------------------------------*/ 86e5c89e4eSSatish Balay /* 87e5c89e4eSSatish Balay Optional file where all PETSc output from various prints is saved 88e5c89e4eSSatish Balay */ 890298fd71SBarry Smith FILE *petsc_history = NULL; 90e5c89e4eSSatish Balay 91e5c89e4eSSatish Balay #undef __FUNCT__ 92f3dea69dSBarry Smith #define __FUNCT__ "PetscOpenHistoryFile" 937087cfbeSBarry Smith PetscErrorCode PetscOpenHistoryFile(const char filename[],FILE **fd) 94e5c89e4eSSatish Balay { 95e5c89e4eSSatish Balay PetscErrorCode ierr; 96e5c89e4eSSatish Balay PetscMPIInt rank,size; 97e5c89e4eSSatish Balay char pfile[PETSC_MAX_PATH_LEN],pname[PETSC_MAX_PATH_LEN],fname[PETSC_MAX_PATH_LEN],date[64]; 98e5c89e4eSSatish Balay char version[256]; 99e5c89e4eSSatish Balay 100e5c89e4eSSatish Balay PetscFunctionBegin; 101e5c89e4eSSatish Balay ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr); 102e5c89e4eSSatish Balay if (!rank) { 103e5c89e4eSSatish Balay char arch[10]; 104f56c2debSBarry Smith int err; 105f56c2debSBarry Smith 106e5c89e4eSSatish Balay ierr = PetscGetArchType(arch,10);CHKERRQ(ierr); 107e5c89e4eSSatish Balay ierr = PetscGetDate(date,64);CHKERRQ(ierr); 108a523d312SBarry Smith ierr = PetscGetVersion(version,256);CHKERRQ(ierr); 109e5c89e4eSSatish Balay ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRQ(ierr); 110e5c89e4eSSatish Balay if (filename) { 111e5c89e4eSSatish Balay ierr = PetscFixFilename(filename,fname);CHKERRQ(ierr); 112e5c89e4eSSatish Balay } else { 113e5c89e4eSSatish Balay ierr = PetscGetHomeDirectory(pfile,240);CHKERRQ(ierr); 114e5c89e4eSSatish Balay ierr = PetscStrcat(pfile,"/.petschistory");CHKERRQ(ierr); 115e5c89e4eSSatish Balay ierr = PetscFixFilename(pfile,fname);CHKERRQ(ierr); 116e5c89e4eSSatish Balay } 117e5c89e4eSSatish Balay 118a297a907SKarl Rupp *fd = fopen(fname,"a"); 119a297a907SKarl Rupp if (!fd) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_FILE_OPEN,"Cannot open file: %s",fname); 120a297a907SKarl Rupp 121e5c89e4eSSatish Balay ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"---------------------------------------------------------\n");CHKERRQ(ierr); 122e5c89e4eSSatish Balay ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"%s %s\n",version,date);CHKERRQ(ierr); 123e5c89e4eSSatish Balay ierr = PetscGetProgramName(pname,PETSC_MAX_PATH_LEN);CHKERRQ(ierr); 124e5c89e4eSSatish Balay ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"%s on a %s, %d proc. with options:\n",pname,arch,size);CHKERRQ(ierr); 125e5c89e4eSSatish Balay ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"---------------------------------------------------------\n");CHKERRQ(ierr); 126a297a907SKarl Rupp 127f56c2debSBarry Smith err = fflush(*fd); 128e32f2f54SBarry Smith if (err) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SYS,"fflush() failed on file"); 129e5c89e4eSSatish Balay } 130e5c89e4eSSatish Balay PetscFunctionReturn(0); 131e5c89e4eSSatish Balay } 132e5c89e4eSSatish Balay 133e5c89e4eSSatish Balay #undef __FUNCT__ 134f3dea69dSBarry Smith #define __FUNCT__ "PetscCloseHistoryFile" 1357087cfbeSBarry Smith PetscErrorCode PetscCloseHistoryFile(FILE **fd) 136e5c89e4eSSatish Balay { 137e5c89e4eSSatish Balay PetscErrorCode ierr; 138e5c89e4eSSatish Balay PetscMPIInt rank; 139e5c89e4eSSatish Balay char date[64]; 140f56c2debSBarry Smith int err; 141e5c89e4eSSatish Balay 142e5c89e4eSSatish Balay PetscFunctionBegin; 143e5c89e4eSSatish Balay ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr); 144e5c89e4eSSatish Balay if (!rank) { 145e5c89e4eSSatish Balay ierr = PetscGetDate(date,64);CHKERRQ(ierr); 146e5c89e4eSSatish Balay ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"---------------------------------------------------------\n");CHKERRQ(ierr); 147e5c89e4eSSatish Balay ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"Finished at %s\n",date);CHKERRQ(ierr); 148e5c89e4eSSatish Balay ierr = PetscFPrintf(PETSC_COMM_SELF,*fd,"---------------------------------------------------------\n");CHKERRQ(ierr); 149f56c2debSBarry Smith err = fflush(*fd); 150e32f2f54SBarry Smith if (err) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SYS,"fflush() failed on file"); 151f56c2debSBarry Smith err = fclose(*fd); 152e32f2f54SBarry Smith if (err) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SYS,"fclose() failed on file"); 153e5c89e4eSSatish Balay } 154e5c89e4eSSatish Balay PetscFunctionReturn(0); 155e5c89e4eSSatish Balay } 156e5c89e4eSSatish Balay 157e5c89e4eSSatish Balay /* ------------------------------------------------------------------------------*/ 158e5c89e4eSSatish Balay 159e5c89e4eSSatish Balay /* 160e5c89e4eSSatish Balay This is ugly and probably belongs somewhere else, but I want to 161e5c89e4eSSatish Balay be able to put a true MPI abort error handler with command line args. 162e5c89e4eSSatish Balay 163e5c89e4eSSatish Balay This is so MPI errors in the debugger will leave all the stack 1643c311c98SBarry Smith frames. The default MP_Abort() cleans up and exits thus providing no useful information 1653c311c98SBarry Smith in the debugger hence we call abort() instead of MPI_Abort(). 166e5c89e4eSSatish Balay */ 167e5c89e4eSSatish Balay 168e5c89e4eSSatish Balay #undef __FUNCT__ 169e5c89e4eSSatish Balay #define __FUNCT__ "Petsc_MPI_AbortOnError" 170e5c89e4eSSatish Balay void Petsc_MPI_AbortOnError(MPI_Comm *comm,PetscMPIInt *flag) 171e5c89e4eSSatish Balay { 172e5c89e4eSSatish Balay PetscFunctionBegin; 1733c311c98SBarry Smith (*PetscErrorPrintf)("MPI error %d\n",*flag); 174e5c89e4eSSatish Balay abort(); 175e5c89e4eSSatish Balay } 176e5c89e4eSSatish Balay 177e5c89e4eSSatish Balay #undef __FUNCT__ 178e5c89e4eSSatish Balay #define __FUNCT__ "Petsc_MPI_DebuggerOnError" 179e5c89e4eSSatish Balay void Petsc_MPI_DebuggerOnError(MPI_Comm *comm,PetscMPIInt *flag) 180e5c89e4eSSatish Balay { 181e5c89e4eSSatish Balay PetscErrorCode ierr; 182e5c89e4eSSatish Balay 183e5c89e4eSSatish Balay PetscFunctionBegin; 1843c311c98SBarry Smith (*PetscErrorPrintf)("MPI error %d\n",*flag); 185e5c89e4eSSatish Balay ierr = PetscAttachDebugger(); 186a297a907SKarl Rupp if (ierr) MPI_Abort(*comm,*flag); /* hopeless so get out */ 187e5c89e4eSSatish Balay } 188e5c89e4eSSatish Balay 189e5c89e4eSSatish Balay #undef __FUNCT__ 190e5c89e4eSSatish Balay #define __FUNCT__ "PetscEnd" 191e5c89e4eSSatish Balay /*@C 192e5c89e4eSSatish Balay PetscEnd - Calls PetscFinalize() and then ends the program. This is useful if one 193e5c89e4eSSatish Balay wishes a clean exit somewhere deep in the program. 194e5c89e4eSSatish Balay 195e5c89e4eSSatish Balay Collective on PETSC_COMM_WORLD 196e5c89e4eSSatish Balay 197e5c89e4eSSatish Balay Options Database Keys are the same as for PetscFinalize() 198e5c89e4eSSatish Balay 199e5c89e4eSSatish Balay Level: advanced 200e5c89e4eSSatish Balay 201e5c89e4eSSatish Balay Note: 202e5c89e4eSSatish Balay See PetscInitialize() for more general runtime options. 203e5c89e4eSSatish Balay 20488c29154SBarry Smith .seealso: PetscInitialize(), PetscOptionsView(), PetscMallocDump(), PetscMPIDump(), PetscFinalize() 205e5c89e4eSSatish Balay @*/ 2067087cfbeSBarry Smith PetscErrorCode PetscEnd(void) 207e5c89e4eSSatish Balay { 208e5c89e4eSSatish Balay PetscFunctionBegin; 209e5c89e4eSSatish Balay PetscFinalize(); 210e5c89e4eSSatish Balay exit(0); 211e5c89e4eSSatish Balay return 0; 212e5c89e4eSSatish Balay } 213e5c89e4eSSatish Balay 214ace3abfcSBarry Smith PetscBool PetscOptionsPublish = PETSC_FALSE; 21509573ac7SBarry Smith extern PetscErrorCode PetscSetUseTrMalloc_Private(void); 216ace3abfcSBarry Smith extern PetscBool petscsetmallocvisited; 217e5c89e4eSSatish Balay static char emacsmachinename[256]; 218e5c89e4eSSatish Balay 219e5c89e4eSSatish Balay PetscErrorCode (*PetscExternalVersionFunction)(MPI_Comm) = 0; 220e5c89e4eSSatish Balay PetscErrorCode (*PetscExternalHelpFunction)(MPI_Comm) = 0; 221e5c89e4eSSatish Balay 222e5c89e4eSSatish Balay #undef __FUNCT__ 223e5c89e4eSSatish Balay #define __FUNCT__ "PetscSetHelpVersionFunctions" 224e5c89e4eSSatish Balay /*@C 225e5c89e4eSSatish Balay PetscSetHelpVersionFunctions - Sets functions that print help and version information 226e5c89e4eSSatish Balay before the PETSc help and version information is printed. Must call BEFORE PetscInitialize(). 227e5c89e4eSSatish Balay This routine enables a "higher-level" package that uses PETSc to print its messages first. 228e5c89e4eSSatish Balay 229e5c89e4eSSatish Balay Input Parameter: 2300298fd71SBarry Smith + help - the help function (may be NULL) 2310298fd71SBarry Smith - version - the version function (may be NULL) 232e5c89e4eSSatish Balay 233e5c89e4eSSatish Balay Level: developer 234e5c89e4eSSatish Balay 235e5c89e4eSSatish Balay Concepts: package help message 236e5c89e4eSSatish Balay 237e5c89e4eSSatish Balay @*/ 2387087cfbeSBarry Smith PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*help)(MPI_Comm),PetscErrorCode (*version)(MPI_Comm)) 239e5c89e4eSSatish Balay { 240e5c89e4eSSatish Balay PetscFunctionBegin; 241e5c89e4eSSatish Balay PetscExternalHelpFunction = help; 242e5c89e4eSSatish Balay PetscExternalVersionFunction = version; 243e5c89e4eSSatish Balay PetscFunctionReturn(0); 244e5c89e4eSSatish Balay } 245e5c89e4eSSatish Balay 2464b0a73b2SBarry Smith #if defined(PETSC_HAVE_CUDA) 2474b0a73b2SBarry Smith #include <cublas.h> 2484b0a73b2SBarry Smith #endif 2494b0a73b2SBarry Smith 250e5c89e4eSSatish Balay #undef __FUNCT__ 251e5c89e4eSSatish Balay #define __FUNCT__ "PetscOptionsCheckInitial_Private" 2527087cfbeSBarry Smith PetscErrorCode PetscOptionsCheckInitial_Private(void) 253e5c89e4eSSatish Balay { 254e5c89e4eSSatish Balay char string[64],mname[PETSC_MAX_PATH_LEN],*f; 255e5c89e4eSSatish Balay MPI_Comm comm = PETSC_COMM_WORLD; 256019f2bb8SSatish Balay PetscBool flg1 = PETSC_FALSE,flg2 = PETSC_FALSE,flg3 = PETSC_FALSE,flg4 = PETSC_FALSE,flag; 257e5c89e4eSSatish Balay PetscErrorCode ierr; 258574034a9SJed Brown PetscReal si,logthreshold; 25928559dc8SJed Brown PetscInt intensity; 260e5c89e4eSSatish Balay int i; 261e5c89e4eSSatish Balay PetscMPIInt rank; 262e5c89e4eSSatish Balay char version[256]; 263e5c89e4eSSatish Balay 264e5c89e4eSSatish Balay PetscFunctionBegin; 265e5c89e4eSSatish Balay ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr); 266e5c89e4eSSatish Balay 267e5c89e4eSSatish Balay /* 268e5c89e4eSSatish Balay Setup the memory management; support for tracing malloc() usage 269e5c89e4eSSatish Balay */ 2700298fd71SBarry Smith ierr = PetscOptionsHasName(NULL,"-malloc_log",&flg3);CHKERRQ(ierr); 271574034a9SJed Brown logthreshold = 0.0; 2720298fd71SBarry Smith ierr = PetscOptionsGetReal(NULL,"-malloc_log_threshold",&logthreshold,&flg1);CHKERRQ(ierr); 273574034a9SJed Brown if (flg1) flg3 = PETSC_TRUE; 2748bf1f09cSShri Abhyankar #if defined(PETSC_USE_DEBUG) 2750298fd71SBarry Smith ierr = PetscOptionsGetBool(NULL,"-malloc",&flg1,&flg2);CHKERRQ(ierr); 276e5c89e4eSSatish Balay if ((!flg2 || flg1) && !petscsetmallocvisited) { 277dc92acbaSJed Brown if (flg2 || !(PETSC_RUNNING_ON_VALGRIND)) { 278555d055bSBarry Smith /* turn off default -malloc if valgrind is being used */ 279e5c89e4eSSatish Balay ierr = PetscSetUseTrMalloc_Private();CHKERRQ(ierr); 280555d055bSBarry Smith } 281e5c89e4eSSatish Balay } 282e5c89e4eSSatish Balay #else 2830298fd71SBarry Smith ierr = PetscOptionsGetBool(NULL,"-malloc_dump",&flg1,NULL);CHKERRQ(ierr); 2840298fd71SBarry Smith ierr = PetscOptionsGetBool(NULL,"-malloc",&flg2,NULL);CHKERRQ(ierr); 285e5c89e4eSSatish Balay if (flg1 || flg2 || flg3) {ierr = PetscSetUseTrMalloc_Private();CHKERRQ(ierr);} 286e5c89e4eSSatish Balay #endif 287e5c89e4eSSatish Balay if (flg3) { 288574034a9SJed Brown ierr = PetscMallocSetDumpLogThreshold((PetscLogDouble)logthreshold);CHKERRQ(ierr); 289e5c89e4eSSatish Balay } 29090d69ab7SBarry Smith flg1 = PETSC_FALSE; 2910298fd71SBarry Smith ierr = PetscOptionsGetBool(NULL,"-malloc_debug",&flg1,NULL);CHKERRQ(ierr); 292e5c89e4eSSatish Balay if (flg1) { 293e5c89e4eSSatish Balay ierr = PetscSetUseTrMalloc_Private();CHKERRQ(ierr); 294e5c89e4eSSatish Balay ierr = PetscMallocDebug(PETSC_TRUE);CHKERRQ(ierr); 295e5c89e4eSSatish Balay } 296dc92acbaSJed Brown flg1 = PETSC_FALSE; 2970298fd71SBarry Smith ierr = PetscOptionsGetBool(NULL,"-malloc_test",&flg1,NULL);CHKERRQ(ierr); 2988bf1f09cSShri Abhyankar #if defined(PETSC_USE_DEBUG) 299dc92acbaSJed Brown if (flg1 && !PETSC_RUNNING_ON_VALGRIND) { 300dc92acbaSJed Brown ierr = PetscSetUseTrMalloc_Private();CHKERRQ(ierr); 301dc92acbaSJed Brown ierr = PetscMallocSetDumpLog();CHKERRQ(ierr); 302dc92acbaSJed Brown ierr = PetscMallocDebug(PETSC_TRUE);CHKERRQ(ierr); 303dc92acbaSJed Brown } 304dc92acbaSJed Brown #endif 305e5c89e4eSSatish Balay 30690d69ab7SBarry Smith flg1 = PETSC_FALSE; 3070298fd71SBarry Smith ierr = PetscOptionsGetBool(NULL,"-malloc_info",&flg1,NULL);CHKERRQ(ierr); 3087783f70dSSatish Balay if (!flg1) { 30990d69ab7SBarry Smith flg1 = PETSC_FALSE; 3100298fd71SBarry Smith ierr = PetscOptionsGetBool(NULL,"-memory_info",&flg1,NULL);CHKERRQ(ierr); 3117783f70dSSatish Balay } 312e5c89e4eSSatish Balay if (flg1) { 313e5c89e4eSSatish Balay ierr = PetscMemorySetGetMaximumUsage();CHKERRQ(ierr); 314e5c89e4eSSatish Balay } 315e5c89e4eSSatish Balay 316e5c89e4eSSatish Balay /* 317e5c89e4eSSatish Balay Set the display variable for graphics 318e5c89e4eSSatish Balay */ 319e5c89e4eSSatish Balay ierr = PetscSetDisplay();CHKERRQ(ierr); 320e5c89e4eSSatish Balay 32151dcc849SKerry Stevens /* 322e5c89e4eSSatish Balay Print the PETSc version information 323e5c89e4eSSatish Balay */ 3240298fd71SBarry Smith ierr = PetscOptionsHasName(NULL,"-v",&flg1);CHKERRQ(ierr); 3250298fd71SBarry Smith ierr = PetscOptionsHasName(NULL,"-version",&flg2);CHKERRQ(ierr); 3260298fd71SBarry Smith ierr = PetscOptionsHasName(NULL,"-help",&flg3);CHKERRQ(ierr); 327e5c89e4eSSatish Balay if (flg1 || flg2 || flg3) { 328e5c89e4eSSatish Balay 329e5c89e4eSSatish Balay /* 330e5c89e4eSSatish Balay Print "higher-level" package version message 331e5c89e4eSSatish Balay */ 332e5c89e4eSSatish Balay if (PetscExternalVersionFunction) { 333e5c89e4eSSatish Balay ierr = (*PetscExternalVersionFunction)(comm);CHKERRQ(ierr); 334e5c89e4eSSatish Balay } 335e5c89e4eSSatish Balay 336a523d312SBarry Smith ierr = PetscGetVersion(version,256);CHKERRQ(ierr); 337e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"--------------------------------------------\ 338e5c89e4eSSatish Balay ------------------------------\n");CHKERRQ(ierr); 339e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"%s\n",version);CHKERRQ(ierr); 340e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"%s",PETSC_AUTHOR_INFO);CHKERRQ(ierr); 341e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"See docs/changes/index.html for recent updates.\n");CHKERRQ(ierr); 34284e42920SBarry Smith ierr = (*PetscHelpPrintf)(comm,"See docs/faq.html for problems.\n");CHKERRQ(ierr); 343e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"See docs/manualpages/index.html for help. \n");CHKERRQ(ierr); 344e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"Libraries linked from %s\n",PETSC_LIB_DIR);CHKERRQ(ierr); 345e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"--------------------------------------------\ 346e5c89e4eSSatish Balay ------------------------------\n");CHKERRQ(ierr); 347e5c89e4eSSatish Balay } 348e5c89e4eSSatish Balay 349e5c89e4eSSatish Balay /* 350e5c89e4eSSatish Balay Print "higher-level" package help message 351e5c89e4eSSatish Balay */ 352e5c89e4eSSatish Balay if (flg3) { 353e5c89e4eSSatish Balay if (PetscExternalHelpFunction) { 354e5c89e4eSSatish Balay ierr = (*PetscExternalHelpFunction)(comm);CHKERRQ(ierr); 355e5c89e4eSSatish Balay } 356e5c89e4eSSatish Balay } 357e5c89e4eSSatish Balay 358e5c89e4eSSatish Balay /* 359e5c89e4eSSatish Balay Setup the error handling 360e5c89e4eSSatish Balay */ 36190d69ab7SBarry Smith flg1 = PETSC_FALSE; 3620298fd71SBarry Smith ierr = PetscOptionsGetBool(NULL,"-on_error_abort",&flg1,NULL);CHKERRQ(ierr); 363b59baad1SJed Brown if (flg1) { 364d54338ecSKarl Rupp ierr = MPI_Comm_set_errhandler(PETSC_COMM_WORLD,MPI_ERRORS_ARE_FATAL);CHKERRQ(ierr); 365b59baad1SJed Brown ierr = PetscPushErrorHandler(PetscAbortErrorHandler,0);CHKERRQ(ierr); 366b59baad1SJed Brown } 36790d69ab7SBarry Smith flg1 = PETSC_FALSE; 3680298fd71SBarry Smith ierr = PetscOptionsGetBool(NULL,"-on_error_mpiabort",&flg1,NULL);CHKERRQ(ierr); 369cb9801acSJed Brown if (flg1) { ierr = PetscPushErrorHandler(PetscMPIAbortErrorHandler,0);CHKERRQ(ierr);} 37090d69ab7SBarry Smith flg1 = PETSC_FALSE; 3710298fd71SBarry Smith ierr = PetscOptionsGetBool(NULL,"-mpi_return_on_error",&flg1,NULL);CHKERRQ(ierr); 372e5c89e4eSSatish Balay if (flg1) { 373d54338ecSKarl Rupp ierr = MPI_Comm_set_errhandler(comm,MPI_ERRORS_RETURN);CHKERRQ(ierr); 374e5c89e4eSSatish Balay } 37590d69ab7SBarry Smith flg1 = PETSC_FALSE; 3760298fd71SBarry Smith ierr = PetscOptionsGetBool(NULL,"-no_signal_handler",&flg1,NULL);CHKERRQ(ierr); 3778d359177SBarry Smith if (!flg1) {ierr = PetscPushSignalHandler(PetscSignalHandlerDefault,(void*)0);CHKERRQ(ierr);} 37896cc47afSJed Brown flg1 = PETSC_FALSE; 3790298fd71SBarry Smith ierr = PetscOptionsGetBool(NULL,"-fp_trap",&flg1,NULL);CHKERRQ(ierr); 38096cc47afSJed Brown if (flg1) {ierr = PetscSetFPTrap(PETSC_FP_TRAP_ON);CHKERRQ(ierr);} 38128559dc8SJed Brown ierr = PetscOptionsGetInt(NULL,"-check_pointer_intensity",&intensity,&flag);CHKERRQ(ierr); 38228559dc8SJed Brown if (flag) {ierr = PetscCheckPointerSetIntensity(intensity);CHKERRQ(ierr);} 383e5c89e4eSSatish Balay 384e5c89e4eSSatish Balay /* 385e5c89e4eSSatish Balay Setup debugger information 386e5c89e4eSSatish Balay */ 387e5c89e4eSSatish Balay ierr = PetscSetDefaultDebugger();CHKERRQ(ierr); 3880298fd71SBarry Smith ierr = PetscOptionsGetString(NULL,"-on_error_attach_debugger",string,64,&flg1);CHKERRQ(ierr); 389e5c89e4eSSatish Balay if (flg1) { 390e5c89e4eSSatish Balay MPI_Errhandler err_handler; 391e5c89e4eSSatish Balay 392e5c89e4eSSatish Balay ierr = PetscSetDebuggerFromString(string);CHKERRQ(ierr); 393d54338ecSKarl Rupp ierr = MPI_Comm_create_errhandler((MPI_Handler_function*)Petsc_MPI_DebuggerOnError,&err_handler);CHKERRQ(ierr); 394d54338ecSKarl Rupp ierr = MPI_Comm_set_errhandler(comm,err_handler);CHKERRQ(ierr); 395e5c89e4eSSatish Balay ierr = PetscPushErrorHandler(PetscAttachDebuggerErrorHandler,0);CHKERRQ(ierr); 396e5c89e4eSSatish Balay } 3970298fd71SBarry Smith ierr = PetscOptionsGetString(NULL,"-debug_terminal",string,64,&flg1);CHKERRQ(ierr); 3985e96ac45SJed Brown if (flg1) { ierr = PetscSetDebugTerminal(string);CHKERRQ(ierr); } 3990298fd71SBarry Smith ierr = PetscOptionsGetString(NULL,"-start_in_debugger",string,64,&flg1);CHKERRQ(ierr); 4000298fd71SBarry Smith ierr = PetscOptionsGetString(NULL,"-stop_for_debugger",string,64,&flg2);CHKERRQ(ierr); 401e5c89e4eSSatish Balay if (flg1 || flg2) { 402e5c89e4eSSatish Balay PetscMPIInt size; 403e5c89e4eSSatish Balay PetscInt lsize,*nodes; 404e5c89e4eSSatish Balay MPI_Errhandler err_handler; 405e5c89e4eSSatish Balay /* 406e5c89e4eSSatish Balay we have to make sure that all processors have opened 407e5c89e4eSSatish Balay connections to all other processors, otherwise once the 408e5c89e4eSSatish Balay debugger has stated it is likely to receive a SIGUSR1 409e5c89e4eSSatish Balay and kill the program. 410e5c89e4eSSatish Balay */ 411e5c89e4eSSatish Balay ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRQ(ierr); 412e5c89e4eSSatish Balay if (size > 2) { 413533163c2SBarry Smith PetscMPIInt dummy = 0; 414e5c89e4eSSatish Balay MPI_Status status; 415e5c89e4eSSatish Balay for (i=0; i<size; i++) { 416e5c89e4eSSatish Balay if (rank != i) { 417e5c89e4eSSatish Balay ierr = MPI_Send(&dummy,1,MPI_INT,i,109,PETSC_COMM_WORLD);CHKERRQ(ierr); 418e5c89e4eSSatish Balay } 419e5c89e4eSSatish Balay } 420e5c89e4eSSatish Balay for (i=0; i<size; i++) { 421e5c89e4eSSatish Balay if (rank != i) { 422e5c89e4eSSatish Balay ierr = MPI_Recv(&dummy,1,MPI_INT,i,109,PETSC_COMM_WORLD,&status);CHKERRQ(ierr); 423e5c89e4eSSatish Balay } 424e5c89e4eSSatish Balay } 425e5c89e4eSSatish Balay } 426e5c89e4eSSatish Balay /* check if this processor node should be in debugger */ 427785e854fSJed Brown ierr = PetscMalloc1(size,&nodes);CHKERRQ(ierr); 428e5c89e4eSSatish Balay lsize = size; 4290298fd71SBarry Smith ierr = PetscOptionsGetIntArray(NULL,"-debugger_nodes",nodes,&lsize,&flag);CHKERRQ(ierr); 430e5c89e4eSSatish Balay if (flag) { 431e5c89e4eSSatish Balay for (i=0; i<lsize; i++) { 432e5c89e4eSSatish Balay if (nodes[i] == rank) { flag = PETSC_FALSE; break; } 433e5c89e4eSSatish Balay } 434e5c89e4eSSatish Balay } 435e5c89e4eSSatish Balay if (!flag) { 436e5c89e4eSSatish Balay ierr = PetscSetDebuggerFromString(string);CHKERRQ(ierr); 437e5c89e4eSSatish Balay ierr = PetscPushErrorHandler(PetscAbortErrorHandler,0);CHKERRQ(ierr); 438e5c89e4eSSatish Balay if (flg1) { 439e5c89e4eSSatish Balay ierr = PetscAttachDebugger();CHKERRQ(ierr); 440e5c89e4eSSatish Balay } else { 441e5c89e4eSSatish Balay ierr = PetscStopForDebugger();CHKERRQ(ierr); 442e5c89e4eSSatish Balay } 443d54338ecSKarl Rupp ierr = MPI_Comm_create_errhandler((MPI_Handler_function*)Petsc_MPI_AbortOnError,&err_handler);CHKERRQ(ierr); 444d54338ecSKarl Rupp ierr = MPI_Comm_set_errhandler(comm,err_handler);CHKERRQ(ierr); 445e5c89e4eSSatish Balay } 446e5c89e4eSSatish Balay ierr = PetscFree(nodes);CHKERRQ(ierr); 447e5c89e4eSSatish Balay } 448e5c89e4eSSatish Balay 4490298fd71SBarry Smith ierr = PetscOptionsGetString(NULL,"-on_error_emacs",emacsmachinename,128,&flg1);CHKERRQ(ierr); 450cb9801acSJed Brown if (flg1 && !rank) {ierr = PetscPushErrorHandler(PetscEmacsClientErrorHandler,emacsmachinename);CHKERRQ(ierr);} 451e5c89e4eSSatish Balay 452e5c89e4eSSatish Balay /* 453e5c89e4eSSatish Balay Setup profiling and logging 454e5c89e4eSSatish Balay */ 4556cf91177SBarry Smith #if defined(PETSC_USE_INFO) 4568bb29257SSatish Balay { 457e5c89e4eSSatish Balay char logname[PETSC_MAX_PATH_LEN]; logname[0] = 0; 4580298fd71SBarry Smith ierr = PetscOptionsGetString(NULL,"-info",logname,250,&flg1);CHKERRQ(ierr); 4598bb29257SSatish Balay if (flg1 && logname[0]) { 460fcc2139eSBarry Smith ierr = PetscInfoAllow(PETSC_TRUE,logname);CHKERRQ(ierr); 4618bb29257SSatish Balay } else if (flg1) { 4620298fd71SBarry Smith ierr = PetscInfoAllow(PETSC_TRUE,NULL);CHKERRQ(ierr); 463e5c89e4eSSatish Balay } 464e5c89e4eSSatish Balay } 465865f6aa8SSatish Balay #endif 466865f6aa8SSatish Balay #if defined(PETSC_USE_LOG) 467865f6aa8SSatish Balay mname[0] = 0; 4680298fd71SBarry Smith ierr = PetscOptionsGetString(NULL,"-history",mname,PETSC_MAX_PATH_LEN,&flg1);CHKERRQ(ierr); 469865f6aa8SSatish Balay if (flg1) { 470865f6aa8SSatish Balay if (mname[0]) { 471f3dea69dSBarry Smith ierr = PetscOpenHistoryFile(mname,&petsc_history);CHKERRQ(ierr); 472865f6aa8SSatish Balay } else { 473706d7a88SBarry Smith ierr = PetscOpenHistoryFile(NULL,&petsc_history);CHKERRQ(ierr); 474865f6aa8SSatish Balay } 475865f6aa8SSatish Balay } 476e5c89e4eSSatish Balay #if defined(PETSC_HAVE_MPE) 47790d69ab7SBarry Smith flg1 = PETSC_FALSE; 4780298fd71SBarry Smith ierr = PetscOptionsHasName(NULL,"-log_mpe",&flg1);CHKERRQ(ierr); 479495fc317SBarry Smith if (flg1) {ierr = PetscLogMPEBegin();CHKERRQ(ierr);} 480e5c89e4eSSatish Balay #endif 48190d69ab7SBarry Smith flg1 = PETSC_FALSE; 48290d69ab7SBarry Smith flg2 = PETSC_FALSE; 48390d69ab7SBarry Smith flg3 = PETSC_FALSE; 4840298fd71SBarry Smith ierr = PetscOptionsGetBool(NULL,"-log_all",&flg1,NULL);CHKERRQ(ierr); 4850298fd71SBarry Smith ierr = PetscOptionsGetBool(NULL,"-log",&flg2,NULL);CHKERRQ(ierr); 4860298fd71SBarry Smith ierr = PetscOptionsHasName(NULL,"-log_summary",&flg3);CHKERRQ(ierr); 487f14045dbSBarry Smith ierr = PetscOptionsHasName(NULL,"-log_view",&flg4);CHKERRQ(ierr); 488e5c89e4eSSatish Balay if (flg1) { ierr = PetscLogAllBegin();CHKERRQ(ierr); } 4899f7b6320SBarry Smith else if (flg2 || flg3 || flg4) { ierr = PetscLogBegin();CHKERRQ(ierr);} 490e5c89e4eSSatish Balay 4910298fd71SBarry Smith ierr = PetscOptionsGetString(NULL,"-log_trace",mname,250,&flg1);CHKERRQ(ierr); 492e5c89e4eSSatish Balay if (flg1) { 493e5c89e4eSSatish Balay char name[PETSC_MAX_PATH_LEN],fname[PETSC_MAX_PATH_LEN]; 494e5c89e4eSSatish Balay FILE *file; 495e5c89e4eSSatish Balay if (mname[0]) { 496e5c89e4eSSatish Balay sprintf(name,"%s.%d",mname,rank); 497e5c89e4eSSatish Balay ierr = PetscFixFilename(name,fname);CHKERRQ(ierr); 498e5c89e4eSSatish Balay file = fopen(fname,"w"); 499f3dea69dSBarry Smith if (!file) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_FILE_OPEN,"Unable to open trace file: %s",fname); 500a297a907SKarl Rupp } else file = PETSC_STDOUT; 501a297a907SKarl Rupp 502e5c89e4eSSatish Balay ierr = PetscLogTraceBegin(file);CHKERRQ(ierr); 503e5c89e4eSSatish Balay } 504e5c89e4eSSatish Balay #endif 505e5c89e4eSSatish Balay 506e78c4b8cSBarry Smith ierr = PetscOptionsGetBool(NULL,"-saws_options",&PetscOptionsPublish,NULL);CHKERRQ(ierr); 507e5c89e4eSSatish Balay 5084b0a73b2SBarry Smith #if defined(PETSC_HAVE_CUDA) 5090298fd71SBarry Smith ierr = PetscOptionsHasName(NULL,"-cuda_show_devices",&flg1);CHKERRQ(ierr); 5104b0a73b2SBarry Smith if (flg1) { 5114b0a73b2SBarry Smith struct cudaDeviceProp prop; 5124b0a73b2SBarry Smith int devCount; 5134b0a73b2SBarry Smith int device; 5142692e278SPaul Mullowney cudaError_t err = cudaSuccess; 5152692e278SPaul Mullowney err = cudaGetDeviceCount(&devCount); 5162692e278SPaul Mullowney if (err != cudaSuccess) 5172692e278SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SYS,"error in cudaGetDeviceCount %s",cudaGetErrorString(err)); 5184b0a73b2SBarry Smith for (device = 0; device < devCount; ++device) { 5192692e278SPaul Mullowney err = cudaGetDeviceProperties(&prop, device); 5202692e278SPaul Mullowney if (err != cudaSuccess) 5212692e278SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SYS,"error in cudaGetDeviceProperties %s",cudaGetErrorString(err)); 5224b0a73b2SBarry Smith ierr = PetscPrintf(PETSC_COMM_WORLD, "CUDA device %d: %s\n", device, prop.name);CHKERRQ(ierr); 5234b0a73b2SBarry Smith } 5244b0a73b2SBarry Smith } 5254b0a73b2SBarry Smith { 526bd72cc96SPaul Mullowney int size; 527bd72cc96SPaul Mullowney ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRQ(ierr); 528bd72cc96SPaul Mullowney if (size>1) { 529bd72cc96SPaul Mullowney int devCount, device, rank; 5302692e278SPaul Mullowney cudaError_t err = cudaSuccess; 5312692e278SPaul Mullowney 5322692e278SPaul Mullowney /* check to see if we force multiple ranks to hit the same GPU */ 5332692e278SPaul Mullowney ierr = PetscOptionsGetInt(NULL,"-cuda_set_device", &device, &flg1);CHKERRQ(ierr); 5342692e278SPaul Mullowney if (flg1) { 5352692e278SPaul Mullowney ierr = cudaSetDevice(device);CHKERRQ(ierr); 5362692e278SPaul Mullowney if (err != cudaSuccess) 5372692e278SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SYS,"error in cudaSetDevice %s",cudaGetErrorString(err)); 5382692e278SPaul Mullowney } else { 5392692e278SPaul Mullowney /* we're not using the same GPU on multiple MPI threads. So try to allocated different 5402692e278SPaul Mullowney GPUs to different threads */ 5412692e278SPaul Mullowney 5422692e278SPaul Mullowney /* First get the device count */ 5432692e278SPaul Mullowney err = cudaGetDeviceCount(&devCount);CHKERRQ(ierr); 5442692e278SPaul Mullowney if (err != cudaSuccess) 5452692e278SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SYS,"error in cudaGetDeviceCount %s",cudaGetErrorString(err)); 5462692e278SPaul Mullowney 5472692e278SPaul Mullowney /* next determine the rank and then set the device via a mod */ 548bd72cc96SPaul Mullowney ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr); 549bd72cc96SPaul Mullowney device = rank % devCount; 5502692e278SPaul Mullowney err = cudaSetDevice(device); 5512692e278SPaul Mullowney if (err != cudaSuccess) 5522692e278SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SYS,"error in cudaSetDevice %s",cudaGetErrorString(err)); 5532692e278SPaul Mullowney } 5542692e278SPaul Mullowney 5552692e278SPaul Mullowney /* set the device flags so that it can map host memory ... do NOT throw exception on err!=cudaSuccess 5562692e278SPaul Mullowney multiple devices may try to set the flags on the same device. So long as one of them succeeds, things 5572692e278SPaul Mullowney are ok. */ 5582692e278SPaul Mullowney err = cudaSetDeviceFlags(cudaDeviceMapHost); 5592692e278SPaul Mullowney 560a297a907SKarl Rupp } else { 5614b0a73b2SBarry Smith int device; 5622692e278SPaul Mullowney cudaError_t err = cudaSuccess; 5632692e278SPaul Mullowney 564f297a14cSJed Brown /* the code below works for serial GPU simulations */ 5650298fd71SBarry Smith ierr = PetscOptionsGetInt(NULL,"-cuda_set_device", &device, &flg1);CHKERRQ(ierr); 5664b0a73b2SBarry Smith if (flg1) { 5674b0a73b2SBarry Smith ierr = cudaSetDevice(device);CHKERRQ(ierr); 5684b0a73b2SBarry Smith } 5692692e278SPaul Mullowney 5702692e278SPaul Mullowney /* set the device flags so that it can map host memory ... here, we error check. */ 5712692e278SPaul Mullowney err = cudaSetDeviceFlags(cudaDeviceMapHost); 5722692e278SPaul Mullowney if (err != cudaSuccess) 5732692e278SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SYS,"error in cudaSetDevice %s",cudaGetErrorString(err)); 5744b0a73b2SBarry Smith } 575bd72cc96SPaul Mullowney } 5764b0a73b2SBarry Smith #endif 5774b0a73b2SBarry Smith 5784b0a73b2SBarry Smith 579e5c89e4eSSatish Balay /* 580e5c89e4eSSatish Balay Print basic help message 581e5c89e4eSSatish Balay */ 5820298fd71SBarry Smith ierr = PetscOptionsHasName(NULL,"-help",&flg1);CHKERRQ(ierr); 583e5c89e4eSSatish Balay if (flg1) { 584e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"Options for all PETSc programs:\n");CHKERRQ(ierr); 585301d30feSBarry Smith ierr = (*PetscHelpPrintf)(comm," -help: prints help method for each option\n");CHKERRQ(ierr); 586301d30feSBarry Smith ierr = (*PetscHelpPrintf)(comm," -on_error_abort: cause an abort when an error is detected. Useful \n ");CHKERRQ(ierr); 587301d30feSBarry Smith ierr = (*PetscHelpPrintf)(comm," only when run in the debugger\n");CHKERRQ(ierr); 588e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -on_error_attach_debugger [gdb,dbx,xxgdb,ups,noxterm]\n");CHKERRQ(ierr); 589e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," start the debugger in new xterm\n");CHKERRQ(ierr); 590e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," unless noxterm is given\n");CHKERRQ(ierr); 591e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -start_in_debugger [gdb,dbx,xxgdb,ups,noxterm]\n");CHKERRQ(ierr); 592e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," start all processes in the debugger\n");CHKERRQ(ierr); 593e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -on_error_emacs <machinename>\n");CHKERRQ(ierr); 594e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," emacs jumps to error file\n");CHKERRQ(ierr); 595e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -debugger_nodes [n1,n2,..] Nodes to start in debugger\n");CHKERRQ(ierr); 596e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -debugger_pause [m] : delay (in seconds) to attach debugger\n");CHKERRQ(ierr); 597e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -stop_for_debugger : prints message on how to attach debugger manually\n");CHKERRQ(ierr); 598e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," waits the delay for you to attach\n");CHKERRQ(ierr); 5991cda70a7SBarry Smith ierr = (*PetscHelpPrintf)(comm," -display display: Location where X window graphics and debuggers are displayed\n");CHKERRQ(ierr); 600e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -no_signal_handler: do not trap error signals\n");CHKERRQ(ierr); 601e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -mpi_return_on_error: MPI returns error code, rather than abort on internal error\n");CHKERRQ(ierr); 602e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -fp_trap: stop on floating point exceptions\n");CHKERRQ(ierr); 603e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," note on IBM RS6000 this slows run greatly\n");CHKERRQ(ierr); 604e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -malloc_dump <optional filename>: dump list of unfreed memory at conclusion\n");CHKERRQ(ierr); 605e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -malloc: use our error checking malloc\n");CHKERRQ(ierr); 606e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -malloc no: don't use error checking malloc\n");CHKERRQ(ierr); 6074161f2a3SBarry Smith ierr = (*PetscHelpPrintf)(comm," -malloc_info: prints total memory usage\n");CHKERRQ(ierr); 6084161f2a3SBarry Smith ierr = (*PetscHelpPrintf)(comm," -malloc_log: keeps log of all memory allocations\n");CHKERRQ(ierr); 609e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -malloc_debug: enables extended checking for memory corruption\n");CHKERRQ(ierr); 610e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -options_table: dump list of options inputted\n");CHKERRQ(ierr); 611e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -options_left: dump list of unused options\n");CHKERRQ(ierr); 612e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -options_left no: don't dump list of unused options\n");CHKERRQ(ierr); 613e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -tmp tmpdir: alternative /tmp directory\n");CHKERRQ(ierr); 614e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -shared_tmp: tmp directory is shared by all processors\n");CHKERRQ(ierr); 615a8c7a070SBarry Smith ierr = (*PetscHelpPrintf)(comm," -not_shared_tmp: each processor has separate tmp directory\n");CHKERRQ(ierr); 616e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -memory_info: print memory usage at end of run\n");CHKERRQ(ierr); 61740ab9619SBarry Smith ierr = (*PetscHelpPrintf)(comm," -server <port>: Run PETSc webserver (default port is 8080) see PetscWebServe()\n");CHKERRQ(ierr); 618e5c89e4eSSatish Balay #if defined(PETSC_USE_LOG) 619e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -get_total_flops: total flops over all processors\n");CHKERRQ(ierr); 620a64a8e02SBarry Smith ierr = (*PetscHelpPrintf)(comm," -log[_summary _summary_python]: logging objects and events\n");CHKERRQ(ierr); 621e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -log_trace [filename]: prints trace of all PETSc calls\n");CHKERRQ(ierr); 622e5c89e4eSSatish Balay #if defined(PETSC_HAVE_MPE) 623495fc317SBarry Smith ierr = (*PetscHelpPrintf)(comm," -log_mpe: Also create logfile viewable through Jumpshot\n");CHKERRQ(ierr); 624e5c89e4eSSatish Balay #endif 6256cf91177SBarry Smith ierr = (*PetscHelpPrintf)(comm," -info <optional filename>: print informative messages about the calculations\n");CHKERRQ(ierr); 626e5c89e4eSSatish Balay #endif 627e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -v: prints PETSc version number and release date\n");CHKERRQ(ierr); 628e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -options_file <file>: reads options from file\n");CHKERRQ(ierr); 629e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm," -petsc_sleep n: sleeps n seconds before running program\n");CHKERRQ(ierr); 630e5c89e4eSSatish Balay ierr = (*PetscHelpPrintf)(comm,"-----------------------------------------------\n");CHKERRQ(ierr); 631e5c89e4eSSatish Balay } 632e5c89e4eSSatish Balay 63374ba8654SBarry Smith #if defined(PETSC_HAVE_POPEN) 63474ba8654SBarry Smith { 63574ba8654SBarry Smith char machine[128]; 63674ba8654SBarry Smith ierr = PetscOptionsGetString(NULL,"-popen_machine",machine,128,&flg1);CHKERRQ(ierr); 63774ba8654SBarry Smith if (flg1) { 63874ba8654SBarry Smith ierr = PetscPOpenSetMachine(machine);CHKERRQ(ierr); 63974ba8654SBarry Smith } 64074ba8654SBarry Smith } 64174ba8654SBarry Smith #endif 64274ba8654SBarry Smith 6430298fd71SBarry Smith ierr = PetscOptionsGetReal(NULL,"-petsc_sleep",&si,&flg1);CHKERRQ(ierr); 644e5c89e4eSSatish Balay if (flg1) { 645e5c89e4eSSatish Balay ierr = PetscSleep(si);CHKERRQ(ierr); 646e5c89e4eSSatish Balay } 647e5c89e4eSSatish Balay 6480298fd71SBarry Smith ierr = PetscOptionsGetString(NULL,"-info_exclude",mname,PETSC_MAX_PATH_LEN,&flg1);CHKERRQ(ierr); 649e5c89e4eSSatish Balay ierr = PetscStrstr(mname,"null",&f);CHKERRQ(ierr); 650e5c89e4eSSatish Balay if (f) { 651ecd8bba6SJed Brown ierr = PetscInfoDeactivateClass(0);CHKERRQ(ierr); 652e5c89e4eSSatish Balay } 653827f890bSBarry Smith 654f14045dbSBarry Smith #if defined(PETSC_HAVE_CUSP) || defined(PETSC_HAVE_VIENNACL) 6550298fd71SBarry Smith ierr = PetscOptionsHasName(NULL,"-log_summary",&flg3);CHKERRQ(ierr); 656f14045dbSBarry Smith if (!flg3) { 657f14045dbSBarry Smith ierr = PetscOptionsHasName(NULL,"-log_view",&flg3);CHKERRQ(ierr); 658f14045dbSBarry Smith } 659bab1f7e6SVictor Minden #endif 660f14045dbSBarry Smith #if defined(PETSC_HAVE_CUSP) 661f14045dbSBarry Smith ierr = PetscOptionsGetBool(NULL,"-cusp_synchronize",&flg3,NULL);CHKERRQ(ierr); 662f14045dbSBarry Smith PetscCUSPSynchronize = flg3; 663f14045dbSBarry Smith #elif defined(PETSC_HAVE_VIENNACL) 664f14045dbSBarry Smith ierr = PetscOptionsGetBool(NULL,"-viennacl_synchronize",&flg3,NULL);CHKERRQ(ierr); 665f14045dbSBarry Smith PetscViennaCLSynchronize = flg3; 6664cf1874eSKarl Rupp #endif 667e5c89e4eSSatish Balay PetscFunctionReturn(0); 668e5c89e4eSSatish Balay } 669df413903SBarry Smith 670