xref: /petsc/src/sys/objects/options.c (revision 581bbe836705fb4885d6b76ea528977ffc16c8c2)
173fca5a0SBarry Smith /* Define Feature test macros to make sure atoll is available (SVr4, POSIX.1-2001, 4.3BSD, C99), not in (C89 and POSIX.1-1996) */
20039db0dSBarry Smith #define PETSC_DESIRE_FEATURE_TEST_MACROS /* for atoll() */
3e5ea902fSJed Brown 
4e5c89e4eSSatish Balay /*
53fc1eb6aSBarry Smith    These routines simplify the use of command line, file options, etc., and are used to manipulate the options database.
63fc1eb6aSBarry Smith    This provides the low-level interface, the high level interface is in aoptions.c
7e5c89e4eSSatish Balay 
83fc1eb6aSBarry Smith    Some routines use regular malloc and free because it cannot know  what malloc is requested with the
93fc1eb6aSBarry Smith    options database until it has already processed the input.
10e5c89e4eSSatish Balay */
11e5c89e4eSSatish Balay 
12af0996ceSBarry Smith #include <petsc/private/petscimpl.h>        /*I  "petscsys.h"   I*/
13665c2dedSJed Brown #include <petscviewer.h>
14ad1ac5ecSJed Brown #include <ctype.h>
15e5c89e4eSSatish Balay #if defined(PETSC_HAVE_MALLOC_H)
16e5c89e4eSSatish Balay #include <malloc.h>
17e5c89e4eSSatish Balay #endif
18ef279fd6SBarry Smith #if defined(PETSC_HAVE_STRINGS_H)
19ef279fd6SBarry Smith #  include <strings.h>          /* strcasecmp */
20ef279fd6SBarry Smith #endif
213bcbd388SSean Farley #if defined(PETSC_HAVE_YAML)
223bcbd388SSean Farley #include <yaml.h>
233bcbd388SSean Farley #endif
24e5c89e4eSSatish Balay 
252d747510SLisandro Dalcin #if defined(PETSC_HAVE_STRCASECMP)
262d747510SLisandro Dalcin #define PetscOptNameCmp(a,b) strcasecmp(a,b)
272d747510SLisandro Dalcin #elif defined(PETSC_HAVE_STRICMP)
282d747510SLisandro Dalcin #define PetscOptNameCmp(a,b) stricmp(a,b)
292d747510SLisandro Dalcin #else
302d747510SLisandro Dalcin #define PetscOptNameCmp(a,b) Error_strcasecmp_not_found
312d747510SLisandro Dalcin #endif
322d747510SLisandro Dalcin 
332d747510SLisandro Dalcin #include <petsc/private/hashtable.h>
342d747510SLisandro Dalcin 
352d747510SLisandro Dalcin /* This assumes ASCII encoding and ignores locale settings */
362d747510SLisandro Dalcin /* Using tolower() is about 2X slower in microbenchmarks   */
372d747510SLisandro Dalcin PETSC_STATIC_INLINE int PetscToLower(int c)
382d747510SLisandro Dalcin {
392d747510SLisandro Dalcin   return ((c >= 'A') & (c <= 'Z')) ? c + 'a' - 'A' : c;
402d747510SLisandro Dalcin }
412d747510SLisandro Dalcin 
422d747510SLisandro Dalcin /* Bob Jenkins's one at a time hash function (case-insensitive) */
432d747510SLisandro Dalcin PETSC_STATIC_INLINE unsigned int PetscOptHash(const char key[])
442d747510SLisandro Dalcin {
452d747510SLisandro Dalcin   unsigned int hash = 0;
462d747510SLisandro Dalcin   while (*key) {
472d747510SLisandro Dalcin     hash += PetscToLower(*key++);
482d747510SLisandro Dalcin     hash += hash << 10;
492d747510SLisandro Dalcin     hash ^= hash >>  6;
502d747510SLisandro Dalcin   }
512d747510SLisandro Dalcin   hash += hash <<  3;
522d747510SLisandro Dalcin   hash ^= hash >> 11;
532d747510SLisandro Dalcin   hash += hash << 15;
542d747510SLisandro Dalcin   return hash;
552d747510SLisandro Dalcin }
562d747510SLisandro Dalcin 
572d747510SLisandro Dalcin PETSC_STATIC_INLINE int PetscOptEqual(const char a[],const char b[])
582d747510SLisandro Dalcin {
592d747510SLisandro Dalcin   return !PetscOptNameCmp(a,b);
602d747510SLisandro Dalcin }
612d747510SLisandro Dalcin 
622d747510SLisandro Dalcin KHASH_INIT(HO, kh_cstr_t, int, 1, PetscOptHash, PetscOptEqual)
632d747510SLisandro Dalcin 
64e5c89e4eSSatish Balay /*
653fc1eb6aSBarry Smith     This table holds all the options set by the user. For simplicity, we use a static size database
66e5c89e4eSSatish Balay */
672d747510SLisandro Dalcin #define MAXOPTNAME 512
68e5c89e4eSSatish Balay #define MAXOPTIONS 512
69e5c89e4eSSatish Balay #define MAXALIASES  25
7074e0666dSJed Brown #define MAXPREFIXES 25
712d747510SLisandro Dalcin #define MAXOPTIONSMONITORS 5
72e5c89e4eSSatish Balay 
734416b707SBarry Smith struct  _n_PetscOptions {
743de2bfdfSBarry Smith   PetscOptions   previous;
752d747510SLisandro Dalcin   int            N;                    /* number of options */
762d747510SLisandro Dalcin   char           *names[MAXOPTIONS];   /* option names */
772d747510SLisandro Dalcin   char           *values[MAXOPTIONS];  /* option values */
782d747510SLisandro Dalcin   PetscBool      used[MAXOPTIONS];     /* flag option use */
79081c24baSBoyana Norris 
802d747510SLisandro Dalcin   /* Hash table */
812d747510SLisandro Dalcin   khash_t(HO)    *ht;
822d747510SLisandro Dalcin 
832d747510SLisandro Dalcin   /* Prefixes */
842d747510SLisandro Dalcin   int            prefixind;
852d747510SLisandro Dalcin   int            prefixstack[MAXPREFIXES];
862d747510SLisandro Dalcin   char           prefix[MAXOPTNAME];
872d747510SLisandro Dalcin 
882d747510SLisandro Dalcin   /* Aliases */
892d747510SLisandro Dalcin   int            Naliases;                   /* number or aliases */
902d747510SLisandro Dalcin   char           *aliases1[MAXALIASES];      /* aliased */
912d747510SLisandro Dalcin   char           *aliases2[MAXALIASES];      /* aliasee */
922d747510SLisandro Dalcin 
932d747510SLisandro Dalcin   /* Help */
942d747510SLisandro Dalcin   PetscBool      help; /* flag whether "-help" is in the database */
952d747510SLisandro Dalcin 
962d747510SLisandro Dalcin   /* Monitors */
97081c24baSBoyana Norris   PetscErrorCode (*monitor[MAXOPTIONSMONITORS])(const char[],const char[],void*); /* returns control to user after */
98c2efdce3SBarry Smith   PetscErrorCode (*monitordestroy[MAXOPTIONSMONITORS])(void**);         /* */
99081c24baSBoyana Norris   void           *monitorcontext[MAXOPTIONSMONITORS];                  /* to pass arbitrary user data into monitor */
100081c24baSBoyana Norris   PetscInt       numbermonitors;                                       /* to, for instance, detect options being set */
1014416b707SBarry Smith };
102e5c89e4eSSatish Balay 
103b4205f0bSBarry Smith static PetscOptions defaultoptions = NULL;  /* the options database routines query this object for options */
1042d747510SLisandro Dalcin 
105081c24baSBoyana Norris /*
106081c24baSBoyana Norris     Options events monitor
107081c24baSBoyana Norris */
1082d747510SLisandro Dalcin static PetscErrorCode PetscOptionsMonitor(PetscOptions options,const char name[],const char value[])
109e5c89e4eSSatish Balay {
1102d747510SLisandro Dalcin   PetscInt       i;
111e5c89e4eSSatish Balay   PetscErrorCode ierr;
112e5c89e4eSSatish Balay 
1132d747510SLisandro Dalcin   if (!PetscInitializeCalled) return 0;
114e5c89e4eSSatish Balay   PetscFunctionBegin;
1152d747510SLisandro Dalcin   for (i=0; i<options->numbermonitors; i++) {
1162d747510SLisandro Dalcin     ierr = (*options->monitor[i])(name,value,options->monitorcontext[i]);CHKERRQ(ierr);
117e5c89e4eSSatish Balay   }
118e5c89e4eSSatish Balay   PetscFunctionReturn(0);
119e5c89e4eSSatish Balay }
120e5c89e4eSSatish Balay 
1212d747510SLisandro Dalcin /*@
1222d747510SLisandro Dalcin    PetscOptionsCreate - Creates an empty options database.
123e5c89e4eSSatish Balay 
1241c9f3c13SBarry Smith    Logically collective
1251c9f3c13SBarry Smith 
126e5c89e4eSSatish Balay    Output Parameter:
1272d747510SLisandro Dalcin .  options - Options database object
128e5c89e4eSSatish Balay 
129e5c89e4eSSatish Balay    Level: advanced
130e5c89e4eSSatish Balay 
1311c9f3c13SBarry Smith    Developer Note: We may want eventually to pass a MPI_Comm to determine the ownership of the object
1321c9f3c13SBarry Smith 
133b4205f0bSBarry Smith .seealso: PetscOptionsDestroy(), PetscOptionsPush(), PetscOptionsPop(), PetscOptionsInsert(), PetscOptionsSetValue()
134e5c89e4eSSatish Balay @*/
1352d747510SLisandro Dalcin PetscErrorCode PetscOptionsCreate(PetscOptions *options)
1362d747510SLisandro Dalcin {
1372d747510SLisandro Dalcin   if (!options) return PETSC_ERR_ARG_NULL;
1382d747510SLisandro Dalcin   *options = (PetscOptions)calloc(1,sizeof(**options));
1392d747510SLisandro Dalcin   if (!*options) return PETSC_ERR_MEM;
1402d747510SLisandro Dalcin   return 0;
1412d747510SLisandro Dalcin }
1422d747510SLisandro Dalcin 
1432d747510SLisandro Dalcin /*@
1442d747510SLisandro Dalcin     PetscOptionsDestroy - Destroys an option database.
1452d747510SLisandro Dalcin 
1461c9f3c13SBarry Smith     Logically collective on whatever communicator was associated with the call to PetscOptionsCreate()
1471c9f3c13SBarry Smith 
1482d747510SLisandro Dalcin   Input Parameter:
1492d747510SLisandro Dalcin .  options - the PetscOptions object
1502d747510SLisandro Dalcin 
1513de2bfdfSBarry Smith    Level: advanced
1522d747510SLisandro Dalcin 
153b4205f0bSBarry Smith .seealso: PetscOptionsInsert(), PetscOptionsPush(), PetscOptionsPop(), PetscOptionsInsert(), PetscOptionsSetValue()
1542d747510SLisandro Dalcin @*/
1552d747510SLisandro Dalcin PetscErrorCode PetscOptionsDestroy(PetscOptions *options)
156e5c89e4eSSatish Balay {
157e5c89e4eSSatish Balay   PetscErrorCode ierr;
158e5c89e4eSSatish Balay 
1592d747510SLisandro Dalcin   if (!*options) return 0;
1603de2bfdfSBarry Smith   if ((*options)->previous) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"You are destroying an option that has been used with PetscOptionsPush() but does not have a corresponding PetscOptionsPop()");
1612d747510SLisandro Dalcin   ierr = PetscOptionsClear(*options);if (ierr) return ierr;
1622d747510SLisandro Dalcin   /* XXX what about monitors ? */
1632800570dSLisandro Dalcin   free(*options);
1642d747510SLisandro Dalcin   *options = NULL;
165e5c89e4eSSatish Balay   PetscFunctionReturn(0);
166e5c89e4eSSatish Balay }
167e5c89e4eSSatish Balay 
1682d747510SLisandro Dalcin /*
1692d747510SLisandro Dalcin     PetscOptionsCreateDefault - Creates the default global options database
1702d747510SLisandro Dalcin */
1712d747510SLisandro Dalcin PetscErrorCode PetscOptionsCreateDefault(void)
172e5c89e4eSSatish Balay {
173e5c89e4eSSatish Balay   PetscErrorCode ierr;
174e5c89e4eSSatish Balay 
1752d747510SLisandro Dalcin   if (!defaultoptions) {
1762d747510SLisandro Dalcin     ierr = PetscOptionsCreate(&defaultoptions);if (ierr) return ierr;
1772d747510SLisandro Dalcin   }
1782d747510SLisandro Dalcin   return 0;
1792d747510SLisandro Dalcin }
1802d747510SLisandro Dalcin 
181b4205f0bSBarry Smith /*@
182b4205f0bSBarry Smith       PetscOptionsPush - Push a new PetscOptions object as the default provider of options
1831c9f3c13SBarry Smith                          Allows using different parts of a code to use different options databases
184b4205f0bSBarry Smith 
185b4205f0bSBarry Smith   Logically Collective
186b4205f0bSBarry Smith 
187b4205f0bSBarry Smith   Input Parameter:
188b4205f0bSBarry Smith .   opt - the options obtained with PetscOptionsCreate()
189b4205f0bSBarry Smith 
190b4205f0bSBarry Smith   Notes:
191b4205f0bSBarry Smith   Use PetscOptionsPop() to return to the previous default options database
1921c9f3c13SBarry Smith 
1939666a313SBarry Smith   The collectivity of this routine is complex; only the MPI processes that call this routine will
1941c9f3c13SBarry Smith   have the affect of these options. If some processes that create objects call this routine and others do
1951c9f3c13SBarry Smith   not the code may fail in complicated ways because the same parallel solvers may incorrectly use different options
1961c9f3c13SBarry Smith   on different ranks.
197b4205f0bSBarry Smith 
1983de2bfdfSBarry Smith    Level: advanced
1993de2bfdfSBarry Smith 
2003c6db4c4SPierre Jolivet .seealso: PetscOptionsPop(), PetscOptionsCreate(), PetscOptionsInsert(), PetscOptionsSetValue(), PetscOptionsLeft()
201b4205f0bSBarry Smith 
202b4205f0bSBarry Smith @*/
203b4205f0bSBarry Smith PetscErrorCode PetscOptionsPush(PetscOptions opt)
204b4205f0bSBarry Smith {
205b4205f0bSBarry Smith   PetscErrorCode ierr;
206b4205f0bSBarry Smith 
207b4205f0bSBarry Smith   PetscFunctionBegin;
208b4205f0bSBarry Smith   ierr = PetscOptionsCreateDefault();CHKERRQ(ierr);
209b4205f0bSBarry Smith   opt->previous        = defaultoptions;
210b4205f0bSBarry Smith   defaultoptions       = opt;
211b4205f0bSBarry Smith   PetscFunctionReturn(0);
212b4205f0bSBarry Smith }
213b4205f0bSBarry Smith 
214b4205f0bSBarry Smith /*@
215b4205f0bSBarry Smith       PetscOptionsPop - Pop the most recent PetscOptionsPush() to return to the previous default options
216b4205f0bSBarry Smith 
2171c9f3c13SBarry Smith       Logically collective on whatever communicator was associated with the call to PetscOptionsCreate()
218b4205f0bSBarry Smith 
219b4205f0bSBarry Smith   Notes:
220b4205f0bSBarry Smith   Use PetscOptionsPop() to return to the previous default options database
221b4205f0bSBarry Smith   Allows using different parts of a code to use different options databases
222b4205f0bSBarry Smith 
2233de2bfdfSBarry Smith    Level: advanced
2243de2bfdfSBarry Smith 
2253c6db4c4SPierre Jolivet .seealso: PetscOptionsPop(), PetscOptionsCreate(), PetscOptionsInsert(), PetscOptionsSetValue(), PetscOptionsLeft()
226b4205f0bSBarry Smith 
227b4205f0bSBarry Smith @*/
228b4205f0bSBarry Smith PetscErrorCode PetscOptionsPop(void)
229b4205f0bSBarry Smith {
2303de2bfdfSBarry Smith   PetscOptions current = defaultoptions;
2313de2bfdfSBarry Smith 
232b4205f0bSBarry Smith   PetscFunctionBegin;
233b4205f0bSBarry Smith   if (!defaultoptions) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing default options");
234b4205f0bSBarry Smith   if (!defaultoptions->previous) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"PetscOptionsPop() called too many times");
235b4205f0bSBarry Smith   defaultoptions = defaultoptions->previous;
2363de2bfdfSBarry Smith   current->previous    = NULL;
237b4205f0bSBarry Smith   PetscFunctionReturn(0);
238b4205f0bSBarry Smith }
239b4205f0bSBarry Smith 
2402d747510SLisandro Dalcin /*
2412d747510SLisandro Dalcin     PetscOptionsDestroyDefault - Destroys the default global options database
2422d747510SLisandro Dalcin */
2432d747510SLisandro Dalcin PetscErrorCode PetscOptionsDestroyDefault(void)
2442d747510SLisandro Dalcin {
2452d747510SLisandro Dalcin   PetscErrorCode ierr;
2463de2bfdfSBarry Smith   PetscOptions   tmp;
2472d747510SLisandro Dalcin 
2483de2bfdfSBarry Smith   /* Destroy any options that the user forgot to pop */
2493de2bfdfSBarry Smith   while (defaultoptions->previous) {
2503de2bfdfSBarry Smith     tmp = defaultoptions;
2513de2bfdfSBarry Smith     ierr = PetscOptionsPop();CHKERRQ(ierr);
2523de2bfdfSBarry Smith     ierr = PetscOptionsDestroy(&tmp);CHKERRQ(ierr);
2533de2bfdfSBarry Smith   }
2542d747510SLisandro Dalcin   ierr = PetscOptionsDestroy(&defaultoptions);if (ierr) return ierr;
2552d747510SLisandro Dalcin   return 0;
256e5c89e4eSSatish Balay }
257e5c89e4eSSatish Balay 
25894ef8ddeSSatish Balay /*@C
2597cd08cecSJed Brown    PetscOptionsValidKey - PETSc Options database keys must begin with one or two dashes (-) followed by a letter.
2603fc1eb6aSBarry Smith 
261447722d5SBarry Smith    Not collective
2621c9f3c13SBarry Smith 
2633fc1eb6aSBarry Smith    Input Parameter:
2642d747510SLisandro Dalcin .  key - string to check if valid
2653fc1eb6aSBarry Smith 
2663fc1eb6aSBarry Smith    Output Parameter:
2672d747510SLisandro Dalcin .  valid - PETSC_TRUE if a valid key
2683fc1eb6aSBarry Smith 
269f6680f47SSatish Balay    Level: intermediate
2703fc1eb6aSBarry Smith @*/
2712d747510SLisandro Dalcin PetscErrorCode PetscOptionsValidKey(const char key[],PetscBool *valid)
27296fc60bcSBarry Smith {
273f603b5e9SToby Isaac   char           *ptr;
2747c5db45bSBarry Smith 
27596fc60bcSBarry Smith   PetscFunctionBegin;
2762d747510SLisandro Dalcin   if (key) PetscValidCharPointer(key,1);
2772d747510SLisandro Dalcin   PetscValidPointer(valid,2);
2782d747510SLisandro Dalcin   *valid = PETSC_FALSE;
2792d747510SLisandro Dalcin   if (!key) PetscFunctionReturn(0);
2802d747510SLisandro Dalcin   if (key[0] != '-') PetscFunctionReturn(0);
2812d747510SLisandro Dalcin   if (key[1] == '-') key++;
282c850d057SPierre Jolivet   if (!isalpha((int)key[1])) PetscFunctionReturn(0);
2832d747510SLisandro Dalcin   (void) strtod(key,&ptr);
284c850d057SPierre Jolivet   if (ptr != key && !(*ptr == '_' || isalnum((int)*ptr))) PetscFunctionReturn(0);
2852d747510SLisandro Dalcin   *valid = PETSC_TRUE;
28696fc60bcSBarry Smith   PetscFunctionReturn(0);
28796fc60bcSBarry Smith }
28896fc60bcSBarry Smith 
289e5c89e4eSSatish Balay /*@C
290e5c89e4eSSatish Balay    PetscOptionsInsertString - Inserts options into the database from a string
291e5c89e4eSSatish Balay 
2921c9f3c13SBarry Smith    Logically Collective
293e5c89e4eSSatish Balay 
294e5c89e4eSSatish Balay    Input Parameter:
295080f0011SToby Isaac +  options - options object
296080f0011SToby Isaac -  in_str - string that contains options separated by blanks
297e5c89e4eSSatish Balay 
298e5c89e4eSSatish Balay    Level: intermediate
299e5c89e4eSSatish Balay 
3009666a313SBarry Smith   The collectivity of this routine is complex; only the MPI processes that call this routine will
3011c9f3c13SBarry Smith   have the affect of these options. If some processes that create objects call this routine and others do
3021c9f3c13SBarry Smith   not the code may fail in complicated ways because the same parallel solvers may incorrectly use different options
3031c9f3c13SBarry Smith   on different ranks.
3041c9f3c13SBarry Smith 
305e5c89e4eSSatish Balay    Contributed by Boyana Norris
306e5c89e4eSSatish Balay 
30788c29154SBarry Smith .seealso: PetscOptionsSetValue(), PetscOptionsView(), PetscOptionsHasName(), PetscOptionsGetInt(),
308acfcf0e5SJed Brown           PetscOptionsGetReal(), PetscOptionsGetString(), PetscOptionsGetIntArray(), PetscOptionsBool(),
309e5c89e4eSSatish Balay           PetscOptionsName(), PetscOptionsBegin(), PetscOptionsEnd(), PetscOptionsHead(),
310e5c89e4eSSatish Balay           PetscOptionsStringArray(),PetscOptionsRealArray(), PetscOptionsScalar(),
311acfcf0e5SJed Brown           PetscOptionsBoolGroupBegin(), PetscOptionsBoolGroup(), PetscOptionsBoolGroupEnd(),
312a264d7a6SBarry Smith           PetscOptionsFList(), PetscOptionsEList(), PetscOptionsInsertFile()
313e5c89e4eSSatish Balay @*/
314c5929fdfSBarry Smith PetscErrorCode PetscOptionsInsertString(PetscOptions options,const char in_str[])
315e5c89e4eSSatish Balay {
31696fc60bcSBarry Smith   char           *first,*second;
317e5c89e4eSSatish Balay   PetscErrorCode ierr;
3189c9d3cfdSBarry Smith   PetscToken     token;
319bf9c6086SStefano Zampini   PetscBool      key,ispush,ispop,isopts;
320e5c89e4eSSatish Balay 
321e5c89e4eSSatish Balay   PetscFunctionBegin;
32296fc60bcSBarry Smith   ierr = PetscTokenCreate(in_str,' ',&token);CHKERRQ(ierr);
323e5c89e4eSSatish Balay   ierr = PetscTokenFind(token,&first);CHKERRQ(ierr);
32496fc60bcSBarry Smith   while (first) {
3259db968c8SJed Brown     ierr = PetscStrcasecmp(first,"-prefix_push",&ispush);CHKERRQ(ierr);
3269db968c8SJed Brown     ierr = PetscStrcasecmp(first,"-prefix_pop",&ispop);CHKERRQ(ierr);
327bf9c6086SStefano Zampini     ierr = PetscStrcasecmp(first,"-options_file",&isopts);CHKERRQ(ierr);
32896fc60bcSBarry Smith     ierr = PetscOptionsValidKey(first,&key);CHKERRQ(ierr);
3299db968c8SJed Brown     if (ispush) {
3309db968c8SJed Brown       ierr = PetscTokenFind(token,&second);CHKERRQ(ierr);
331c5929fdfSBarry Smith       ierr = PetscOptionsPrefixPush(options,second);CHKERRQ(ierr);
3329db968c8SJed Brown       ierr = PetscTokenFind(token,&first);CHKERRQ(ierr);
3339db968c8SJed Brown     } else if (ispop) {
334c5929fdfSBarry Smith       ierr = PetscOptionsPrefixPop(options);CHKERRQ(ierr);
3359db968c8SJed Brown       ierr = PetscTokenFind(token,&first);CHKERRQ(ierr);
336bf9c6086SStefano Zampini     } else if (isopts) {
337bf9c6086SStefano Zampini       ierr = PetscTokenFind(token,&second);CHKERRQ(ierr);
338bf9c6086SStefano Zampini       ierr = PetscOptionsInsertFile(PETSC_COMM_SELF,options,second,PETSC_TRUE);CHKERRQ(ierr);
339bf9c6086SStefano Zampini       ierr = PetscTokenFind(token,&first);CHKERRQ(ierr);
3409db968c8SJed Brown     } else if (key) {
341e5c89e4eSSatish Balay       ierr = PetscTokenFind(token,&second);CHKERRQ(ierr);
34296fc60bcSBarry Smith       ierr = PetscOptionsValidKey(second,&key);CHKERRQ(ierr);
34396fc60bcSBarry Smith       if (!key) {
344c5929fdfSBarry Smith         ierr = PetscOptionsSetValue(options,first,second);CHKERRQ(ierr);
34596fc60bcSBarry Smith         ierr = PetscTokenFind(token,&first);CHKERRQ(ierr);
34696fc60bcSBarry Smith       } else {
347c5929fdfSBarry Smith         ierr  = PetscOptionsSetValue(options,first,NULL);CHKERRQ(ierr);
34896fc60bcSBarry Smith         first = second;
34996fc60bcSBarry Smith       }
35096fc60bcSBarry Smith     } else {
35196fc60bcSBarry Smith       ierr = PetscTokenFind(token,&first);CHKERRQ(ierr);
352e5c89e4eSSatish Balay     }
353e5c89e4eSSatish Balay   }
3548c74ee41SBarry Smith   ierr = PetscTokenDestroy(&token);CHKERRQ(ierr);
355e5c89e4eSSatish Balay   PetscFunctionReturn(0);
356e5c89e4eSSatish Balay }
357e5c89e4eSSatish Balay 
3583fc1eb6aSBarry Smith /*
3593fc1eb6aSBarry Smith     Returns a line (ended by a \n, \r or null character of any length. Result should be freed with free()
3603fc1eb6aSBarry Smith */
3615fa91da5SBarry Smith static char *Petscgetline(FILE * f)
3625fa91da5SBarry Smith {
3635fa91da5SBarry Smith   size_t size  = 0;
3645fa91da5SBarry Smith   size_t len   = 0;
3655fa91da5SBarry Smith   size_t last  = 0;
3660298fd71SBarry Smith   char   *buf  = NULL;
3675fa91da5SBarry Smith 
36802c9f0b5SLisandro Dalcin   if (feof(f)) return NULL;
3695fa91da5SBarry Smith   do {
3705fa91da5SBarry Smith     size += 1024; /* BUFSIZ is defined as "the optimal read size for this platform" */
3716e0c8459SSatish Balay     buf   = (char*)realloc((void*)buf,size); /* realloc(NULL,n) is the same as malloc(n) */
3725fa91da5SBarry Smith     /* Actually do the read. Note that fgets puts a terminal '\0' on the
3735fa91da5SBarry Smith     end of the string, so we make sure we overwrite this */
374e86f3e45SDave May     if (!fgets(buf+len,1024,f)) buf[len]=0;
3755fa91da5SBarry Smith     PetscStrlen(buf,&len);
3765fa91da5SBarry Smith     last = len - 1;
3775fa91da5SBarry Smith   } while (!feof(f) && buf[last] != '\n' && buf[last] != '\r');
37808ac41f7SSatish Balay   if (len) return buf;
3795fa91da5SBarry Smith   free(buf);
38002c9f0b5SLisandro Dalcin   return NULL;
3815fa91da5SBarry Smith }
3825fa91da5SBarry Smith 
383e5c89e4eSSatish Balay /*@C
384e5c89e4eSSatish Balay      PetscOptionsInsertFile - Inserts options into the database from a file.
385e5c89e4eSSatish Balay 
386d083f849SBarry Smith      Collective
387e5c89e4eSSatish Balay 
388e5c89e4eSSatish Balay   Input Parameter:
3899b754dc9SBarry Smith +   comm - the processes that will share the options (usually PETSC_COMM_WORLD)
390c5929fdfSBarry Smith .   options - options database, use NULL for default global database
391e5c89e4eSSatish Balay .   file - name of file
3929b754dc9SBarry Smith -   require - if PETSC_TRUE will generate an error if the file does not exist
393e5c89e4eSSatish Balay 
394e5c89e4eSSatish Balay 
39595452b02SPatrick Sanan   Notes:
39695452b02SPatrick Sanan     Use  # for lines that are comments and which should be ignored.
397f0feba65SBarry Smith     Usually, instead of using this command, one should list the file name in the call to PetscInitialize(), this insures that certain options
398609bdbeeSBarry Smith    such as -log_view or -malloc_debug are processed properly. This routine only sets options into the options database that will be processed by later
399f0feba65SBarry Smith    calls to XXXSetFromOptions() it should not be used for options listed under PetscInitialize().
4009666a313SBarry Smith    The collectivity of this routine is complex; only the MPI processes in comm will
4011c9f3c13SBarry Smith    have the affect of these options. If some processes that create objects call this routine and others do
4021c9f3c13SBarry Smith    not the code may fail in complicated ways because the same parallel solvers may incorrectly use different options
4031c9f3c13SBarry Smith    on different ranks.
404f0feba65SBarry Smith 
4053bcbd388SSean Farley   Level: developer
406e5c89e4eSSatish Balay 
40788c29154SBarry Smith .seealso: PetscOptionsSetValue(), PetscOptionsView(), PetscOptionsHasName(), PetscOptionsGetInt(),
408acfcf0e5SJed Brown           PetscOptionsGetReal(), PetscOptionsGetString(), PetscOptionsGetIntArray(), PetscOptionsBool(),
409e5c89e4eSSatish Balay           PetscOptionsName(), PetscOptionsBegin(), PetscOptionsEnd(), PetscOptionsHead(),
410e5c89e4eSSatish Balay           PetscOptionsStringArray(),PetscOptionsRealArray(), PetscOptionsScalar(),
411acfcf0e5SJed Brown           PetscOptionsBoolGroupBegin(), PetscOptionsBoolGroup(), PetscOptionsBoolGroupEnd(),
412a264d7a6SBarry Smith           PetscOptionsFList(), PetscOptionsEList()
413e5c89e4eSSatish Balay 
414e5c89e4eSSatish Balay @*/
415c5929fdfSBarry Smith PetscErrorCode PetscOptionsInsertFile(MPI_Comm comm,PetscOptions options,const char file[],PetscBool require)
416e5c89e4eSSatish Balay {
41702c9f0b5SLisandro Dalcin   char           *string,fname[PETSC_MAX_PATH_LEN],*first,*second,*third,*vstring = NULL,*astring = NULL,*packed = NULL;
418e5c89e4eSSatish Balay   PetscErrorCode ierr;
41913e3f751SJed Brown   size_t         i,len,bytes;
420e5c89e4eSSatish Balay   FILE           *fd;
4219c9d3cfdSBarry Smith   PetscToken     token;
422ed9cf6e9SBarry Smith   int            err;
423*581bbe83SVaclav Hapla   char           *cmatch;
424*581bbe83SVaclav Hapla   const char     cmt='#';
4253a018368SJed Brown   PetscMPIInt    rank,cnt=0,acnt=0,counts[2];
426ad38b122SPatrick Sanan   PetscBool      isdir;
427e5c89e4eSSatish Balay 
428e5c89e4eSSatish Balay   PetscFunctionBegin;
42905c7dedfSBarry Smith   ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
43005c7dedfSBarry Smith   if (!rank) {
43166af5158SSatish Balay     cnt        = 0;
43266af5158SSatish Balay     acnt       = 0;
43305c7dedfSBarry Smith 
434e5c89e4eSSatish Balay     ierr = PetscFixFilename(file,fname);CHKERRQ(ierr);
435e5c89e4eSSatish Balay     fd   = fopen(fname,"r");
436ad38b122SPatrick Sanan     ierr = PetscTestDirectory(fname,'r',&isdir);CHKERRQ(ierr);
437ad38b122SPatrick Sanan     if (isdir && require) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"Specified options file %s is a directory",fname);
438ad38b122SPatrick Sanan     if (fd && !isdir) {
4393a018368SJed Brown       PetscSegBuffer vseg,aseg;
4403a018368SJed Brown       ierr = PetscSegBufferCreate(1,4000,&vseg);CHKERRQ(ierr);
4413a018368SJed Brown       ierr = PetscSegBufferCreate(1,2000,&aseg);CHKERRQ(ierr);
4423a018368SJed Brown 
4439b754dc9SBarry Smith       /* the following line will not work when opening initial files (like .petscrc) since info is not yet set */
44402c9f0b5SLisandro Dalcin       ierr = PetscInfo1(NULL,"Opened options file %s\n",file);CHKERRQ(ierr);
445e24ecc5dSJed Brown 
4465fa91da5SBarry Smith       while ((string = Petscgetline(fd))) {
4474704e885SBarry Smith         /* eliminate comments from each line */
448*581bbe83SVaclav Hapla         ierr = PetscStrchr(string,cmt,&cmatch);CHKERRQ(ierr);
44990f79514SSatish Balay         if (cmatch) *cmatch = 0;
450e5c89e4eSSatish Balay         ierr = PetscStrlen(string,&len);CHKERRQ(ierr);
4515981331cSSatish Balay         /* replace tabs, ^M, \n with " " */
452e5c89e4eSSatish Balay         for (i=0; i<len; i++) {
4535981331cSSatish Balay           if (string[i] == '\t' || string[i] == '\r' || string[i] == '\n') {
454e5c89e4eSSatish Balay             string[i] = ' ';
455e5c89e4eSSatish Balay           }
456e5c89e4eSSatish Balay         }
45790f79514SSatish Balay         ierr = PetscTokenCreate(string,' ',&token);CHKERRQ(ierr);
458e5c89e4eSSatish Balay         ierr = PetscTokenFind(token,&first);CHKERRQ(ierr);
45990f79514SSatish Balay         if (!first) {
46002b0d46eSSatish Balay           goto destroy;
46190f79514SSatish Balay         } else if (!first[0]) { /* if first token is empty spaces, redo first token */
46290f79514SSatish Balay           ierr = PetscTokenFind(token,&first);CHKERRQ(ierr);
46390f79514SSatish Balay         }
464e5c89e4eSSatish Balay         ierr = PetscTokenFind(token,&second);CHKERRQ(ierr);
4652662f744SSatish Balay         if (!first) {
4662662f744SSatish Balay           goto destroy;
4672662f744SSatish Balay         } else if (first[0] == '-') {
468e24ecc5dSJed Brown           ierr = PetscStrlen(first,&len);CHKERRQ(ierr);
46913e3f751SJed Brown           ierr = PetscSegBufferGet(vseg,len+1,&vstring);CHKERRQ(ierr);
470580bdb30SBarry Smith           ierr = PetscArraycpy(vstring,first,len);CHKERRQ(ierr);
471e24ecc5dSJed Brown           vstring[len] = ' ';
47209192fe3SBarry Smith           if (second) {
473e24ecc5dSJed Brown             ierr = PetscStrlen(second,&len);CHKERRQ(ierr);
47413e3f751SJed Brown             ierr = PetscSegBufferGet(vseg,len+3,&vstring);CHKERRQ(ierr);
475e24ecc5dSJed Brown             vstring[0] = '"';
476580bdb30SBarry Smith             ierr = PetscArraycpy(vstring+1,second,len);CHKERRQ(ierr);
477e24ecc5dSJed Brown             vstring[len+1] = '"';
478e24ecc5dSJed Brown             vstring[len+2] = ' ';
47909192fe3SBarry Smith           }
48090f79514SSatish Balay         } else {
481ace3abfcSBarry Smith           PetscBool match;
482e5c89e4eSSatish Balay 
483e5c89e4eSSatish Balay           ierr = PetscStrcasecmp(first,"alias",&match);CHKERRQ(ierr);
484e5c89e4eSSatish Balay           if (match) {
485e5c89e4eSSatish Balay             ierr = PetscTokenFind(token,&third);CHKERRQ(ierr);
486e32f2f54SBarry Smith             if (!third) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Error in options file:alias missing (%s)",second);
487e24ecc5dSJed Brown             ierr = PetscStrlen(second,&len);CHKERRQ(ierr);
48813e3f751SJed Brown             ierr = PetscSegBufferGet(aseg,len+1,&astring);CHKERRQ(ierr);
489580bdb30SBarry Smith             ierr = PetscArraycpy(astring,second,len);CHKERRQ(ierr);
490e24ecc5dSJed Brown             astring[len] = ' ';
491e24ecc5dSJed Brown 
492e24ecc5dSJed Brown             ierr = PetscStrlen(third,&len);CHKERRQ(ierr);
49313e3f751SJed Brown             ierr = PetscSegBufferGet(aseg,len+1,&astring);CHKERRQ(ierr);
494580bdb30SBarry Smith             ierr = PetscArraycpy(astring,third,len);CHKERRQ(ierr);
495e24ecc5dSJed Brown             astring[len] = ' ';
496f23aa3ddSBarry Smith           } else SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Unknown statement in options file: (%s)",string);
497e5c89e4eSSatish Balay         }
49802b0d46eSSatish Balay destroy:
4994b40f50bSBarry Smith         free(string);
5008c74ee41SBarry Smith         ierr = PetscTokenDestroy(&token);CHKERRQ(ierr);
501e5c89e4eSSatish Balay       }
502ed9cf6e9SBarry Smith       err = fclose(fd);
503e32f2f54SBarry Smith       if (err) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SYS,"fclose() failed on file");
504e24ecc5dSJed Brown       ierr = PetscSegBufferGetSize(aseg,&bytes);CHKERRQ(ierr); /* size without null termination */
505e24ecc5dSJed Brown       ierr = PetscMPIIntCast(bytes,&acnt);CHKERRQ(ierr);
506e24ecc5dSJed Brown       ierr = PetscSegBufferGet(aseg,1,&astring);CHKERRQ(ierr);
507e24ecc5dSJed Brown       astring[0] = 0;
508e24ecc5dSJed Brown       ierr = PetscSegBufferGetSize(vseg,&bytes);CHKERRQ(ierr); /* size without null termination */
509e24ecc5dSJed Brown       ierr = PetscMPIIntCast(bytes,&cnt);CHKERRQ(ierr);
510e24ecc5dSJed Brown       ierr = PetscSegBufferGet(vseg,1,&vstring);CHKERRQ(ierr);
511e24ecc5dSJed Brown       vstring[0] = 0;
512854ce69bSBarry Smith       ierr = PetscMalloc1(2+acnt+cnt,&packed);CHKERRQ(ierr);
5133a018368SJed Brown       ierr = PetscSegBufferExtractTo(aseg,packed);CHKERRQ(ierr);
5143a018368SJed Brown       ierr = PetscSegBufferExtractTo(vseg,packed+acnt+1);CHKERRQ(ierr);
5153a018368SJed Brown       ierr = PetscSegBufferDestroy(&aseg);CHKERRQ(ierr);
5163a018368SJed Brown       ierr = PetscSegBufferDestroy(&vseg);CHKERRQ(ierr);
517f23aa3ddSBarry Smith     } else if (require) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"Unable to open Options File %s",fname);
5189b754dc9SBarry Smith   }
51905c7dedfSBarry Smith 
5203a018368SJed Brown   counts[0] = acnt;
5213a018368SJed Brown   counts[1] = cnt;
5223a018368SJed Brown   ierr = MPI_Bcast(counts,2,MPI_INT,0,comm);CHKERRQ(ierr);
5233a018368SJed Brown   acnt = counts[0];
5243a018368SJed Brown   cnt = counts[1];
5253a018368SJed Brown   if (rank) {
526854ce69bSBarry Smith     ierr = PetscMalloc1(2+acnt+cnt,&packed);CHKERRQ(ierr);
5273a018368SJed Brown   }
5283a018368SJed Brown   if (acnt || cnt) {
5293a018368SJed Brown     ierr = MPI_Bcast(packed,2+acnt+cnt,MPI_CHAR,0,comm);CHKERRQ(ierr);
5303a018368SJed Brown     astring = packed;
5313a018368SJed Brown     vstring = packed + acnt + 1;
5323a018368SJed Brown   }
5333a018368SJed Brown 
5349b754dc9SBarry Smith   if (acnt) {
5359b754dc9SBarry Smith     PetscToken token;
5369b754dc9SBarry Smith     char       *first,*second;
5379b754dc9SBarry Smith 
5389b754dc9SBarry Smith     ierr = PetscTokenCreate(astring,' ',&token);CHKERRQ(ierr);
5399b754dc9SBarry Smith     ierr = PetscTokenFind(token,&first);CHKERRQ(ierr);
5409b754dc9SBarry Smith     while (first) {
5419b754dc9SBarry Smith       ierr = PetscTokenFind(token,&second);CHKERRQ(ierr);
542c5929fdfSBarry Smith       ierr = PetscOptionsSetAlias(options,first,second);CHKERRQ(ierr);
5439b754dc9SBarry Smith       ierr = PetscTokenFind(token,&first);CHKERRQ(ierr);
5449b754dc9SBarry Smith     }
5458c74ee41SBarry Smith     ierr = PetscTokenDestroy(&token);CHKERRQ(ierr);
5469b754dc9SBarry Smith   }
5479b754dc9SBarry Smith 
5489b754dc9SBarry Smith   if (cnt) {
549c5929fdfSBarry Smith     ierr = PetscOptionsInsertString(options,vstring);CHKERRQ(ierr);
550e5c89e4eSSatish Balay   }
5513a018368SJed Brown   ierr = PetscFree(packed);CHKERRQ(ierr);
552e5c89e4eSSatish Balay   PetscFunctionReturn(0);
553e5c89e4eSSatish Balay }
554e5c89e4eSSatish Balay 
5552d747510SLisandro Dalcin static PetscErrorCode PetscOptionsInsertArgs(PetscOptions options,int argc,char *args[])
55685079163SJed Brown {
55785079163SJed Brown   PetscErrorCode ierr;
55885079163SJed Brown   int            left    = argc - 1;
55985079163SJed Brown   char           **eargs = args + 1;
56085079163SJed Brown 
56185079163SJed Brown   PetscFunctionBegin;
56285079163SJed Brown   while (left) {
563093de6efSBarry Smith     PetscBool isoptions_file,isprefixpush,isprefixpop,isp4,tisp4,isp4yourname,isp4rmrank,key;
56485079163SJed Brown     ierr = PetscStrcasecmp(eargs[0],"-options_file",&isoptions_file);CHKERRQ(ierr);
5659db968c8SJed Brown     ierr = PetscStrcasecmp(eargs[0],"-prefix_push",&isprefixpush);CHKERRQ(ierr);
5669db968c8SJed Brown     ierr = PetscStrcasecmp(eargs[0],"-prefix_pop",&isprefixpop);CHKERRQ(ierr);
56785079163SJed Brown     ierr = PetscStrcasecmp(eargs[0],"-p4pg",&isp4);CHKERRQ(ierr);
56885079163SJed Brown     ierr = PetscStrcasecmp(eargs[0],"-p4yourname",&isp4yourname);CHKERRQ(ierr);
56985079163SJed Brown     ierr = PetscStrcasecmp(eargs[0],"-p4rmrank",&isp4rmrank);CHKERRQ(ierr);
57085079163SJed Brown     ierr = PetscStrcasecmp(eargs[0],"-p4wd",&tisp4);CHKERRQ(ierr);
571ace3abfcSBarry Smith     isp4 = (PetscBool) (isp4 || tisp4);
57285079163SJed Brown     ierr = PetscStrcasecmp(eargs[0],"-np",&tisp4);CHKERRQ(ierr);
573ace3abfcSBarry Smith     isp4 = (PetscBool) (isp4 || tisp4);
57485079163SJed Brown     ierr = PetscStrcasecmp(eargs[0],"-p4amslave",&tisp4);CHKERRQ(ierr);
575093de6efSBarry Smith     ierr = PetscOptionsValidKey(eargs[0],&key);CHKERRQ(ierr);
57685079163SJed Brown 
577093de6efSBarry Smith     if (!key) {
57885079163SJed Brown       eargs++; left--;
57985079163SJed Brown     } else if (isoptions_file) {
58085079163SJed Brown       if (left <= 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"Missing filename for -options_file filename option");
58185079163SJed Brown       if (eargs[1][0] == '-') SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"Missing filename for -options_file filename option");
582c5929fdfSBarry Smith       ierr = PetscOptionsInsertFile(PETSC_COMM_WORLD,options,eargs[1],PETSC_TRUE);CHKERRQ(ierr);
58385079163SJed Brown       eargs += 2; left -= 2;
5849db968c8SJed Brown     } else if (isprefixpush) {
5859db968c8SJed Brown       if (left <= 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"Missing prefix for -prefix_push option");
5869db968c8SJed Brown       if (eargs[1][0] == '-') SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"Missing prefix for -prefix_push option (prefixes cannot start with '-')");
587c5929fdfSBarry Smith       ierr = PetscOptionsPrefixPush(options,eargs[1]);CHKERRQ(ierr);
5889db968c8SJed Brown       eargs += 2; left -= 2;
5899db968c8SJed Brown     } else if (isprefixpop) {
590c5929fdfSBarry Smith       ierr = PetscOptionsPrefixPop(options);CHKERRQ(ierr);
5919db968c8SJed Brown       eargs++; left--;
59285079163SJed Brown 
59385079163SJed Brown       /*
59485079163SJed Brown        These are "bad" options that MPICH, etc put on the command line
59585079163SJed Brown        we strip them out here.
59685079163SJed Brown        */
59785079163SJed Brown     } else if (tisp4 || isp4rmrank) {
59885079163SJed Brown       eargs += 1; left -= 1;
59985079163SJed Brown     } else if (isp4 || isp4yourname) {
60085079163SJed Brown       eargs += 2; left -= 2;
6017935c3d8SJed Brown     } else {
6027935c3d8SJed Brown       PetscBool nextiskey = PETSC_FALSE;
6037935c3d8SJed Brown       if (left >= 2) {ierr = PetscOptionsValidKey(eargs[1],&nextiskey);CHKERRQ(ierr);}
60498b6bf53SJed Brown       if (left < 2 || nextiskey) {
605c5929fdfSBarry Smith         ierr = PetscOptionsSetValue(options,eargs[0],NULL);CHKERRQ(ierr);
60685079163SJed Brown         eargs++; left--;
60785079163SJed Brown       } else {
608c5929fdfSBarry Smith         ierr = PetscOptionsSetValue(options,eargs[0],eargs[1]);CHKERRQ(ierr);
60985079163SJed Brown         eargs += 2; left -= 2;
61085079163SJed Brown       }
61185079163SJed Brown     }
6127935c3d8SJed Brown   }
61385079163SJed Brown   PetscFunctionReturn(0);
61485079163SJed Brown }
61585079163SJed Brown 
61685079163SJed Brown 
617e5c89e4eSSatish Balay /*@C
618e5c89e4eSSatish Balay    PetscOptionsInsert - Inserts into the options database from the command line,
619e5c89e4eSSatish Balay                         the environmental variable and a file.
620e5c89e4eSSatish Balay 
6211c9f3c13SBarry Smith    Collective on PETSC_COMM_WORLD
6221c9f3c13SBarry Smith 
623e5c89e4eSSatish Balay    Input Parameters:
624c5929fdfSBarry Smith +  options - options database or NULL for the default global database
625c5929fdfSBarry Smith .  argc - count of number of command line arguments
626e5c89e4eSSatish Balay .  args - the command line arguments
627e5c89e4eSSatish Balay -  file - optional filename, defaults to ~username/.petscrc
628e5c89e4eSSatish Balay 
629e5c89e4eSSatish Balay    Note:
630e5c89e4eSSatish Balay    Since PetscOptionsInsert() is automatically called by PetscInitialize(),
631e5c89e4eSSatish Balay    the user does not typically need to call this routine. PetscOptionsInsert()
632e5c89e4eSSatish Balay    can be called several times, adding additional entries into the database.
633e5c89e4eSSatish Balay 
634081c24baSBoyana Norris    Options Database Keys:
635081c24baSBoyana Norris +   -options_monitor <optional filename> - print options names and values as they are set
636a2b725a8SWilliam Gropp -   -options_file <filename> - read options from a file
637081c24baSBoyana Norris 
638e5c89e4eSSatish Balay    Level: advanced
639e5c89e4eSSatish Balay 
6402d747510SLisandro Dalcin .seealso: PetscOptionsDestroy(), PetscOptionsView(), PetscOptionsInsertString(), PetscOptionsInsertFile(),
64196fc60bcSBarry Smith           PetscInitialize()
642e5c89e4eSSatish Balay @*/
643c5929fdfSBarry Smith PetscErrorCode PetscOptionsInsert(PetscOptions options,int *argc,char ***args,const char file[])
644e5c89e4eSSatish Balay {
645e5c89e4eSSatish Balay   PetscErrorCode ierr;
646e5c89e4eSSatish Balay   PetscMPIInt    rank;
6472d747510SLisandro Dalcin   char           filename[PETSC_MAX_PATH_LEN];
648ace3abfcSBarry Smith   PetscBool      flag = PETSC_FALSE;
649e5c89e4eSSatish Balay 
6508dea33a6SBarry Smith 
651e5c89e4eSSatish Balay   PetscFunctionBegin;
652e5c89e4eSSatish Balay   ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr);
653e5c89e4eSSatish Balay 
6544b09e917SBarry Smith   if (file && file[0]) {
6552d747510SLisandro Dalcin     ierr = PetscStrreplace(PETSC_COMM_WORLD,file,filename,PETSC_MAX_PATH_LEN);CHKERRQ(ierr);
6562d747510SLisandro Dalcin     ierr = PetscOptionsInsertFile(PETSC_COMM_WORLD,options,filename,PETSC_TRUE);CHKERRQ(ierr);
657321366bcSBarry Smith   }
65885079163SJed Brown   /*
65985079163SJed Brown      We want to be able to give -skip_petscrc on the command line, but need to parse it first.  Since the command line
66085079163SJed Brown      should take precedence, we insert it twice.  It would be sufficient to just scan for -skip_petscrc.
66185079163SJed Brown   */
6622d747510SLisandro Dalcin   if (argc && args && *argc) {ierr = PetscOptionsInsertArgs(options,*argc,*args);CHKERRQ(ierr);}
663c5929fdfSBarry Smith   ierr = PetscOptionsGetBool(NULL,NULL,"-skip_petscrc",&flag,NULL);CHKERRQ(ierr);
664321366bcSBarry Smith   if (!flag) {
6652d747510SLisandro Dalcin     ierr = PetscGetHomeDirectory(filename,PETSC_MAX_PATH_LEN-16);CHKERRQ(ierr);
6661ea3218fSSatish Balay     /* PetscOptionsInsertFile() does a fopen() on rank0 only - so only rank0 HomeDir value is relavent */
6672d747510SLisandro Dalcin     if (filename[0]) { ierr = PetscStrcat(filename,"/.petscrc");CHKERRQ(ierr); }
6682d747510SLisandro Dalcin     ierr = PetscOptionsInsertFile(PETSC_COMM_WORLD,options,filename,PETSC_FALSE);CHKERRQ(ierr);
669c5929fdfSBarry Smith     ierr = PetscOptionsInsertFile(PETSC_COMM_WORLD,options,".petscrc",PETSC_FALSE);CHKERRQ(ierr);
670c5929fdfSBarry Smith     ierr = PetscOptionsInsertFile(PETSC_COMM_WORLD,options,"petscrc",PETSC_FALSE);CHKERRQ(ierr);
671e5c89e4eSSatish Balay   }
672e5c89e4eSSatish Balay 
6732d747510SLisandro Dalcin   /* insert environment options */
674e5c89e4eSSatish Balay   {
6752d747510SLisandro Dalcin     char   *eoptions = NULL;
676e5c89e4eSSatish Balay     size_t len       = 0;
677e5c89e4eSSatish Balay     if (!rank) {
678e5c89e4eSSatish Balay       eoptions = (char*)getenv("PETSC_OPTIONS");
679e5c89e4eSSatish Balay       ierr     = PetscStrlen(eoptions,&len);CHKERRQ(ierr);
68076434e50SSatish Balay       ierr     = MPI_Bcast(&len,1,MPIU_SIZE_T,0,PETSC_COMM_WORLD);CHKERRQ(ierr);
681e5c89e4eSSatish Balay     } else {
68276434e50SSatish Balay       ierr = MPI_Bcast(&len,1,MPIU_SIZE_T,0,PETSC_COMM_WORLD);CHKERRQ(ierr);
683e5c89e4eSSatish Balay       if (len) {
684854ce69bSBarry Smith         ierr = PetscMalloc1(len+1,&eoptions);CHKERRQ(ierr);
685e5c89e4eSSatish Balay       }
686e5c89e4eSSatish Balay     }
687e5c89e4eSSatish Balay     if (len) {
688e5c89e4eSSatish Balay       ierr = MPI_Bcast(eoptions,len,MPI_CHAR,0,PETSC_COMM_WORLD);CHKERRQ(ierr);
68996fc60bcSBarry Smith       if (rank) eoptions[len] = 0;
690c5929fdfSBarry Smith       ierr = PetscOptionsInsertString(options,eoptions);CHKERRQ(ierr);
691e5c89e4eSSatish Balay       if (rank) {ierr = PetscFree(eoptions);CHKERRQ(ierr);}
692e5c89e4eSSatish Balay     }
693e5c89e4eSSatish Balay   }
694e5c89e4eSSatish Balay 
6953bcbd388SSean Farley #if defined(PETSC_HAVE_YAML)
69656a31166SBarry Smith   {
6979fc438c3SToby Isaac     char   *eoptions = NULL;
6989fc438c3SToby Isaac     size_t len       = 0;
6999fc438c3SToby Isaac     if (!rank) {
7009fc438c3SToby Isaac       eoptions = (char*)getenv("PETSC_OPTIONS_YAML");
7019fc438c3SToby Isaac       ierr     = PetscStrlen(eoptions,&len);CHKERRQ(ierr);
7029fc438c3SToby Isaac       ierr     = MPI_Bcast(&len,1,MPIU_SIZE_T,0,PETSC_COMM_WORLD);CHKERRQ(ierr);
7039fc438c3SToby Isaac     } else {
7049fc438c3SToby Isaac       ierr = MPI_Bcast(&len,1,MPIU_SIZE_T,0,PETSC_COMM_WORLD);CHKERRQ(ierr);
7059fc438c3SToby Isaac       if (len) {
7069fc438c3SToby Isaac         ierr = PetscMalloc1(len+1,&eoptions);CHKERRQ(ierr);
7079fc438c3SToby Isaac       }
7089fc438c3SToby Isaac     }
7099fc438c3SToby Isaac     if (len) {
7109fc438c3SToby Isaac       ierr = MPI_Bcast(eoptions,len,MPI_CHAR,0,PETSC_COMM_WORLD);CHKERRQ(ierr);
7119fc438c3SToby Isaac       if (rank) eoptions[len] = 0;
7129fc438c3SToby Isaac       ierr = PetscOptionsInsertStringYAML(options,eoptions);CHKERRQ(ierr);
7139fc438c3SToby Isaac       if (rank) {ierr = PetscFree(eoptions);CHKERRQ(ierr);}
7149fc438c3SToby Isaac     }
7159fc438c3SToby Isaac   }
7169fc438c3SToby Isaac   {
7173bcbd388SSean Farley     char      yaml_file[PETSC_MAX_PATH_LEN];
718080f0011SToby Isaac     char      yaml_string[BUFSIZ];
71956a31166SBarry Smith     PetscBool yaml_flg;
720c5929fdfSBarry Smith     ierr = PetscOptionsGetString(NULL,NULL,"-options_file_yaml",yaml_file,PETSC_MAX_PATH_LEN,&yaml_flg);CHKERRQ(ierr);
72156a31166SBarry Smith     if (yaml_flg) {
72256a31166SBarry Smith       ierr = PetscOptionsInsertFileYAML(PETSC_COMM_WORLD,yaml_file,PETSC_TRUE);CHKERRQ(ierr);
72356a31166SBarry Smith     }
724080f0011SToby Isaac     ierr = PetscOptionsGetString(NULL,NULL,"-options_string_yaml",yaml_string,BUFSIZ,&yaml_flg);CHKERRQ(ierr);
725080f0011SToby Isaac     if (yaml_flg) {
726080f0011SToby Isaac       ierr = PetscOptionsInsertStringYAML(NULL,yaml_string);CHKERRQ(ierr);
727080f0011SToby Isaac     }
72856a31166SBarry Smith   }
7293bcbd388SSean Farley #endif
7303bcbd388SSean Farley 
73185079163SJed Brown   /* insert command line options again because they take precedence over arguments in petscrc/environment */
7322d747510SLisandro Dalcin   if (argc && args && *argc) {ierr = PetscOptionsInsertArgs(options,*argc,*args);CHKERRQ(ierr);}
733e5c89e4eSSatish Balay   PetscFunctionReturn(0);
734e5c89e4eSSatish Balay }
735e5c89e4eSSatish Balay 
736e5c89e4eSSatish Balay /*@C
73788c29154SBarry Smith    PetscOptionsView - Prints the options that have been loaded. This is
738e5c89e4eSSatish Balay    useful for debugging purposes.
739e5c89e4eSSatish Balay 
740c139c21fSBarry Smith    Logically Collective on PetscViewer
741e5c89e4eSSatish Balay 
742e5c89e4eSSatish Balay    Input Parameter:
743a2b725a8SWilliam Gropp +  options - options database, use NULL for default global database
744a2b725a8SWilliam Gropp -  viewer - must be an PETSCVIEWERASCII viewer
745e5c89e4eSSatish Balay 
746e5c89e4eSSatish Balay    Options Database Key:
74726a7e8d4SBarry Smith .  -options_view - Activates PetscOptionsView() within PetscFinalize()
748e5c89e4eSSatish Balay 
7499666a313SBarry Smith    Notes:
7509666a313SBarry Smith    Only the rank zero process of MPI_Comm used to create view prints the option values. Other processes
7511c9f3c13SBarry Smith    may have different values but they are not printed.
7521c9f3c13SBarry Smith 
753e5c89e4eSSatish Balay    Level: advanced
754e5c89e4eSSatish Balay 
755e5c89e4eSSatish Balay .seealso: PetscOptionsAllUsed()
756e5c89e4eSSatish Balay @*/
757c5929fdfSBarry Smith PetscErrorCode PetscOptionsView(PetscOptions options,PetscViewer viewer)
758e5c89e4eSSatish Balay {
759e5c89e4eSSatish Balay   PetscErrorCode ierr;
760431c96f7SBarry Smith   PetscInt       i;
76188c29154SBarry Smith   PetscBool      isascii;
762e5c89e4eSSatish Balay 
763e5c89e4eSSatish Balay   PetscFunctionBegin;
7642d747510SLisandro Dalcin   if (viewer) PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,2);
765c5929fdfSBarry Smith   options = options ? options : defaultoptions;
76688c29154SBarry Smith   if (!viewer) viewer = PETSC_VIEWER_STDOUT_WORLD;
767251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&isascii);CHKERRQ(ierr);
768ce94432eSBarry Smith   if (!isascii) SETERRQ(PetscObjectComm((PetscObject)viewer),PETSC_ERR_SUP,"Only supports ASCII viewer");
76988c29154SBarry Smith 
7702d747510SLisandro Dalcin   if (!options->N) {
77188c29154SBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"#No PETSc Option Table entries\n");CHKERRQ(ierr);
7722d747510SLisandro Dalcin     PetscFunctionReturn(0);
77330694fe9SBarry Smith   }
7742d747510SLisandro Dalcin 
7752d747510SLisandro Dalcin   ierr = PetscViewerASCIIPrintf(viewer,"#PETSc Option Table entries:\n");CHKERRQ(ierr);
776e5c89e4eSSatish Balay   for (i=0; i<options->N; i++) {
777e5c89e4eSSatish Balay     if (options->values[i]) {
77888c29154SBarry Smith       ierr = PetscViewerASCIIPrintf(viewer,"-%s %s\n",options->names[i],options->values[i]);CHKERRQ(ierr);
779e5c89e4eSSatish Balay     } else {
78088c29154SBarry Smith       ierr = PetscViewerASCIIPrintf(viewer,"-%s\n",options->names[i]);CHKERRQ(ierr);
781e5c89e4eSSatish Balay     }
782e5c89e4eSSatish Balay   }
78388c29154SBarry Smith   ierr = PetscViewerASCIIPrintf(viewer,"#End of PETSc Option Table entries\n");CHKERRQ(ierr);
784e5c89e4eSSatish Balay   PetscFunctionReturn(0);
785e5c89e4eSSatish Balay }
786e5c89e4eSSatish Balay 
787e11779c2SBarry Smith /*
788e11779c2SBarry Smith    Called by error handlers to print options used in run
789e11779c2SBarry Smith */
79095c0884eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscOptionsViewError(void)
791e11779c2SBarry Smith {
792e11779c2SBarry Smith   PetscInt     i;
7934416b707SBarry Smith   PetscOptions options = defaultoptions;
794e11779c2SBarry Smith 
795e11779c2SBarry Smith   PetscFunctionBegin;
796e11779c2SBarry Smith   if (options->N) {
797e11779c2SBarry Smith     (*PetscErrorPrintf)("PETSc Option Table entries:\n");
798e11779c2SBarry Smith   } else {
799e11779c2SBarry Smith     (*PetscErrorPrintf)("No PETSc Option Table entries\n");
800e11779c2SBarry Smith   }
801e11779c2SBarry Smith   for (i=0; i<options->N; i++) {
802e11779c2SBarry Smith     if (options->values[i]) {
803e11779c2SBarry Smith       (*PetscErrorPrintf)("-%s %s\n",options->names[i],options->values[i]);
804e11779c2SBarry Smith     } else {
805e11779c2SBarry Smith       (*PetscErrorPrintf)("-%s\n",options->names[i]);
806e11779c2SBarry Smith     }
807e11779c2SBarry Smith   }
808e11779c2SBarry Smith   PetscFunctionReturn(0);
809e11779c2SBarry Smith }
810e11779c2SBarry Smith 
811e5c89e4eSSatish Balay /*@C
81274e0666dSJed Brown    PetscOptionsPrefixPush - Designate a prefix to be used by all options insertions to follow.
81374e0666dSJed Brown 
8141c9f3c13SBarry Smith    Logically Collective
81574e0666dSJed Brown 
8169db968c8SJed Brown    Input Parameter:
817c5929fdfSBarry Smith +  options - options database, or NULL for the default global database
818c5929fdfSBarry Smith -  prefix - The string to append to the existing prefix
8199db968c8SJed Brown 
8209db968c8SJed Brown    Options Database Keys:
8219db968c8SJed Brown +   -prefix_push <some_prefix_> - push the given prefix
8229db968c8SJed Brown -   -prefix_pop - pop the last prefix
8239db968c8SJed Brown 
8249db968c8SJed Brown    Notes:
8259db968c8SJed Brown    It is common to use this in conjunction with -options_file as in
8269db968c8SJed Brown 
8279db968c8SJed Brown $ -prefix_push system1_ -options_file system1rc -prefix_pop -prefix_push system2_ -options_file system2rc -prefix_pop
8289db968c8SJed Brown 
8299db968c8SJed Brown    where the files no longer require all options to be prefixed with -system2_.
83074e0666dSJed Brown 
8319666a313SBarry Smith    The collectivity of this routine is complex; only the MPI processes that call this routine will
8321c9f3c13SBarry Smith    have the affect of these options. If some processes that create objects call this routine and others do
8331c9f3c13SBarry Smith    not the code may fail in complicated ways because the same parallel solvers may incorrectly use different options
8341c9f3c13SBarry Smith    on different ranks.
8351c9f3c13SBarry Smith 
83674e0666dSJed Brown Level: advanced
83774e0666dSJed Brown 
8381c9f3c13SBarry Smith .seealso: PetscOptionsPrefixPop(), PetscOptionsPush(), PetscOptionsPop(), PetscOptionsCreate(), PetscOptionsSetValue()
83974e0666dSJed Brown @*/
840c5929fdfSBarry Smith PetscErrorCode PetscOptionsPrefixPush(PetscOptions options,const char prefix[])
84174e0666dSJed Brown {
84274e0666dSJed Brown   PetscErrorCode ierr;
84374e0666dSJed Brown   size_t         n;
84474e0666dSJed Brown   PetscInt       start;
8452d747510SLisandro Dalcin   char           key[MAXOPTNAME+1];
8462d747510SLisandro Dalcin   PetscBool      valid;
84774e0666dSJed Brown 
84874e0666dSJed Brown   PetscFunctionBegin;
8499db968c8SJed Brown   PetscValidCharPointer(prefix,1);
850c5929fdfSBarry Smith   options = options ? options : defaultoptions;
85174e0666dSJed Brown   if (options->prefixind >= MAXPREFIXES) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Maximum depth of prefix stack %d exceeded, recompile \n src/sys/objects/options.c with larger value for MAXPREFIXES",MAXPREFIXES);
8522d747510SLisandro Dalcin   key[0] = '-'; /* keys must start with '-' */
8532d747510SLisandro Dalcin   ierr = PetscStrncpy(key+1,prefix,sizeof(key)-1);CHKERRQ(ierr);
8542d747510SLisandro Dalcin   ierr = PetscOptionsValidKey(key,&valid);CHKERRQ(ierr);
8552d747510SLisandro Dalcin   if (!valid) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"Given prefix \"%s\" not valid (the first character must be a letter, do not include leading '-')",prefix);
85674e0666dSJed Brown   start = options->prefixind ? options->prefixstack[options->prefixind-1] : 0;
85774e0666dSJed Brown   ierr = PetscStrlen(prefix,&n);CHKERRQ(ierr);
85874e0666dSJed Brown   if (n+1 > sizeof(options->prefix)-start) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Maximum prefix length %d exceeded",sizeof(options->prefix));
859580bdb30SBarry Smith   ierr = PetscArraycpy(options->prefix+start,prefix,n+1);CHKERRQ(ierr);
86074e0666dSJed Brown   options->prefixstack[options->prefixind++] = start+n;
86174e0666dSJed Brown   PetscFunctionReturn(0);
86274e0666dSJed Brown }
86374e0666dSJed Brown 
864c5929fdfSBarry Smith /*@C
86574e0666dSJed Brown    PetscOptionsPrefixPop - Remove the latest options prefix, see PetscOptionsPrefixPush() for details
86674e0666dSJed Brown 
8671c9f3c13SBarry Smith    Logically Collective on the MPI_Comm that called PetscOptionsPrefixPush()
86874e0666dSJed Brown 
869c5929fdfSBarry Smith   Input Parameters:
870c5929fdfSBarry Smith .  options - options database, or NULL for the default global database
871c5929fdfSBarry Smith 
87274e0666dSJed Brown    Level: advanced
87374e0666dSJed Brown 
8741c9f3c13SBarry Smith .seealso: PetscOptionsPrefixPush(), PetscOptionsPush(), PetscOptionsPop(), PetscOptionsCreate(), PetscOptionsSetValue()
87574e0666dSJed Brown @*/
876c5929fdfSBarry Smith PetscErrorCode PetscOptionsPrefixPop(PetscOptions options)
87774e0666dSJed Brown {
87874e0666dSJed Brown   PetscInt offset;
87974e0666dSJed Brown 
88074e0666dSJed Brown   PetscFunctionBegin;
881c5929fdfSBarry Smith   options = options ? options : defaultoptions;
88274e0666dSJed Brown   if (options->prefixind < 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"More prefixes popped than pushed");
88374e0666dSJed Brown   options->prefixind--;
88474e0666dSJed Brown   offset = options->prefixind ? options->prefixstack[options->prefixind-1] : 0;
88574e0666dSJed Brown   options->prefix[offset] = 0;
88674e0666dSJed Brown   PetscFunctionReturn(0);
88774e0666dSJed Brown }
88874e0666dSJed Brown 
889a542b6e8SBarry Smith /*@C
890a542b6e8SBarry Smith     PetscOptionsClear - Removes all options form the database leaving it empty.
891a542b6e8SBarry Smith 
8921c9f3c13SBarry Smith     Logically Collective
8931c9f3c13SBarry Smith 
894c5929fdfSBarry Smith   Input Parameters:
895c5929fdfSBarry Smith .  options - options database, use NULL for the default global database
896c5929fdfSBarry Smith 
8979666a313SBarry Smith    The collectivity of this routine is complex; only the MPI processes that call this routine will
8981c9f3c13SBarry Smith    have the affect of these options. If some processes that create objects call this routine and others do
8991c9f3c13SBarry Smith    not the code may fail in complicated ways because the same parallel solvers may incorrectly use different options
9001c9f3c13SBarry Smith    on different ranks.
9011c9f3c13SBarry Smith 
902a542b6e8SBarry Smith    Level: developer
903a542b6e8SBarry Smith 
904a542b6e8SBarry Smith .seealso: PetscOptionsInsert()
905a542b6e8SBarry Smith @*/
906c5929fdfSBarry Smith PetscErrorCode PetscOptionsClear(PetscOptions options)
907a542b6e8SBarry Smith {
908a542b6e8SBarry Smith   PetscInt i;
909a542b6e8SBarry Smith 
910c5929fdfSBarry Smith   options = options ? options : defaultoptions;
9112d747510SLisandro Dalcin   if (!options) return 0;
9122d747510SLisandro Dalcin 
913a542b6e8SBarry Smith   for (i=0; i<options->N; i++) {
914a542b6e8SBarry Smith     if (options->names[i])  free(options->names[i]);
915a542b6e8SBarry Smith     if (options->values[i]) free(options->values[i]);
916a542b6e8SBarry Smith   }
9172d747510SLisandro Dalcin   options->N = 0;
9182d747510SLisandro Dalcin 
919a542b6e8SBarry Smith   for (i=0; i<options->Naliases; i++) {
920a542b6e8SBarry Smith     free(options->aliases1[i]);
921a542b6e8SBarry Smith     free(options->aliases2[i]);
922a542b6e8SBarry Smith   }
923a542b6e8SBarry Smith   options->Naliases = 0;
924a542b6e8SBarry Smith 
9252d747510SLisandro Dalcin   /* destroy hash table */
9262d747510SLisandro Dalcin   kh_destroy(HO,options->ht);
9272d747510SLisandro Dalcin   options->ht = NULL;
9280eb63584SBarry Smith 
9292d747510SLisandro Dalcin   options->prefixind = 0;
9302d747510SLisandro Dalcin   options->prefix[0] = 0;
9312d747510SLisandro Dalcin   options->help      = PETSC_FALSE;
9324416b707SBarry Smith   return 0;
9334416b707SBarry Smith }
9344416b707SBarry Smith 
9352d747510SLisandro Dalcin /*@C
9362d747510SLisandro Dalcin    PetscOptionsSetAlias - Makes a key and alias for another key
9372d747510SLisandro Dalcin 
9381c9f3c13SBarry Smith    Logically Collective
9392d747510SLisandro Dalcin 
9402d747510SLisandro Dalcin    Input Parameters:
9412d747510SLisandro Dalcin +  options - options database, or NULL for default global database
9422d747510SLisandro Dalcin .  newname - the alias
9432d747510SLisandro Dalcin -  oldname - the name that alias will refer to
9442d747510SLisandro Dalcin 
9452d747510SLisandro Dalcin    Level: advanced
9462d747510SLisandro Dalcin 
9479666a313SBarry Smith    The collectivity of this routine is complex; only the MPI processes that call this routine will
9481c9f3c13SBarry Smith    have the affect of these options. If some processes that create objects call this routine and others do
9491c9f3c13SBarry Smith    not the code may fail in complicated ways because the same parallel solvers may incorrectly use different options
9501c9f3c13SBarry Smith    on different ranks.
9511c9f3c13SBarry Smith 
9522d747510SLisandro Dalcin .seealso: PetscOptionsGetInt(), PetscOptionsGetReal(),OptionsHasName(),
9532d747510SLisandro Dalcin           PetscOptionsGetString(), PetscOptionsGetIntArray(), PetscOptionsGetRealArray(),PetscOptionsBool(),
9542d747510SLisandro Dalcin           PetscOptionsName(), PetscOptionsBegin(), PetscOptionsEnd(), PetscOptionsHead(),
9552d747510SLisandro Dalcin           PetscOptionsStringArray(),PetscOptionsRealArray(), PetscOptionsScalar(),
9562d747510SLisandro Dalcin           PetscOptionsBoolGroupBegin(), PetscOptionsBoolGroup(), PetscOptionsBoolGroupEnd(),
9572d747510SLisandro Dalcin           PetscOptionsFList(), PetscOptionsEList()
9582d747510SLisandro Dalcin @*/
9592d747510SLisandro Dalcin PetscErrorCode PetscOptionsSetAlias(PetscOptions options,const char newname[],const char oldname[])
9602d747510SLisandro Dalcin {
9612d747510SLisandro Dalcin   PetscInt       n;
9622d747510SLisandro Dalcin   size_t         len;
9632d747510SLisandro Dalcin   PetscErrorCode ierr;
9642d747510SLisandro Dalcin 
9652d747510SLisandro Dalcin   PetscFunctionBegin;
9662d747510SLisandro Dalcin   PetscValidCharPointer(newname,2);
9672d747510SLisandro Dalcin   PetscValidCharPointer(oldname,3);
9682d747510SLisandro Dalcin   options = options ? options : defaultoptions;
9692d747510SLisandro Dalcin   if (newname[0] != '-') SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"aliased must start with '-': Instead %s",newname);
9702d747510SLisandro Dalcin   if (oldname[0] != '-') SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"aliasee must start with '-': Instead %s",oldname);
9712d747510SLisandro Dalcin 
9722d747510SLisandro Dalcin   n = options->Naliases;
9732d747510SLisandro Dalcin   if (n >= MAXALIASES) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_MEM,"You have defined to many PETSc options aliases, limit %d recompile \n  src/sys/objects/options.c with larger value for MAXALIASES",MAXALIASES);
9742d747510SLisandro Dalcin 
9752d747510SLisandro Dalcin   newname++; oldname++;
9762d747510SLisandro Dalcin   ierr = PetscStrlen(newname,&len);CHKERRQ(ierr);
9772d747510SLisandro Dalcin   options->aliases1[n] = (char*)malloc((len+1)*sizeof(char));
9782d747510SLisandro Dalcin   ierr = PetscStrcpy(options->aliases1[n],newname);CHKERRQ(ierr);
9792d747510SLisandro Dalcin   ierr = PetscStrlen(oldname,&len);CHKERRQ(ierr);
9802d747510SLisandro Dalcin   options->aliases2[n] = (char*)malloc((len+1)*sizeof(char));
9812d747510SLisandro Dalcin   ierr = PetscStrcpy(options->aliases2[n],oldname);CHKERRQ(ierr);
9822d747510SLisandro Dalcin   options->Naliases++;
9832d747510SLisandro Dalcin   PetscFunctionReturn(0);
9842d747510SLisandro Dalcin }
9854416b707SBarry Smith 
986e5c89e4eSSatish Balay /*@C
987e5c89e4eSSatish Balay    PetscOptionsSetValue - Sets an option name-value pair in the options
988e5c89e4eSSatish Balay    database, overriding whatever is already present.
989e5c89e4eSSatish Balay 
9901c9f3c13SBarry Smith    Logically Collective
991e5c89e4eSSatish Balay 
992e5c89e4eSSatish Balay    Input Parameters:
993c5929fdfSBarry Smith +  options - options database, use NULL for the default global database
994c5929fdfSBarry Smith .  name - name of option, this SHOULD have the - prepended
9952d747510SLisandro Dalcin -  value - the option value (not used for all options, so can be NULL)
996e5c89e4eSSatish Balay 
997e5c89e4eSSatish Balay    Level: intermediate
998e5c89e4eSSatish Balay 
999e5c89e4eSSatish Balay    Note:
1000d49172ceSBarry Smith    This function can be called BEFORE PetscInitialize()
1001d49172ceSBarry Smith 
10029666a313SBarry Smith    The collectivity of this routine is complex; only the MPI processes that call this routine will
10031c9f3c13SBarry Smith    have the affect of these options. If some processes that create objects call this routine and others do
10041c9f3c13SBarry Smith    not the code may fail in complicated ways because the same parallel solvers may incorrectly use different options
10051c9f3c13SBarry Smith    on different ranks.
10061c9f3c13SBarry Smith 
10072d747510SLisandro Dalcin    Developers Note: Uses malloc() directly because PETSc may not be initialized yet.
1008b0250c70SBarry Smith 
10092d747510SLisandro Dalcin .seealso: PetscOptionsInsert(), PetscOptionsClearValue()
1010e5c89e4eSSatish Balay @*/
10112d747510SLisandro Dalcin PetscErrorCode PetscOptionsSetValue(PetscOptions options,const char name[],const char value[])
1012e5c89e4eSSatish Balay {
1013e5c89e4eSSatish Balay   size_t         len;
10142d747510SLisandro Dalcin   int            N,n,i;
1015e5c89e4eSSatish Balay   char           **names;
10162d747510SLisandro Dalcin   char           fullname[MAXOPTNAME] = "";
10172d747510SLisandro Dalcin   PetscErrorCode ierr;
1018e5c89e4eSSatish Balay 
10197272c0d2SVaclav Hapla   if (!options) {
10202d747510SLisandro Dalcin     ierr = PetscOptionsCreateDefault();if (ierr) return ierr;
10217272c0d2SVaclav Hapla     options = defaultoptions;
1022c5929fdfSBarry Smith   }
10232d747510SLisandro Dalcin 
10242d747510SLisandro Dalcin   if (name[0] != '-') return PETSC_ERR_ARG_OUTOFRANGE;
1025e5c89e4eSSatish Balay 
1026d49172ceSBarry Smith   /* this is so that -h and -help are equivalent (p4 does not like -help)*/
10277272c0d2SVaclav Hapla   if (!PetscOptNameCmp(name,"-h")) name = "-help";
10282d747510SLisandro Dalcin   if (!PetscOptNameCmp(name,"-help")) options->help = PETSC_TRUE;
1029e5c89e4eSSatish Balay 
10302d747510SLisandro Dalcin   name++; /* skip starting dash */
10312d747510SLisandro Dalcin 
103274e0666dSJed Brown   if (options->prefixind > 0) {
1033d49172ceSBarry Smith     strncpy(fullname,options->prefix,sizeof(fullname));
10342d747510SLisandro Dalcin     fullname[sizeof(fullname)-1] = 0;
103589ae1891SBarry Smith     strncat(fullname,name,sizeof(fullname)-strlen(fullname)-1);
10362d747510SLisandro Dalcin     fullname[sizeof(fullname)-1] = 0;
103774e0666dSJed Brown     name = fullname;
103874e0666dSJed Brown   }
103974e0666dSJed Brown 
104074e0666dSJed Brown   /* check against aliases */
1041e5c89e4eSSatish Balay   N = options->Naliases;
1042e5c89e4eSSatish Balay   for (i=0; i<N; i++) {
10432d747510SLisandro Dalcin     int result = PetscOptNameCmp(options->aliases1[i],name);
10442d747510SLisandro Dalcin     if (!result) { name = options->aliases2[i]; break; }
1045e5c89e4eSSatish Balay   }
1046e5c89e4eSSatish Balay 
10472d747510SLisandro Dalcin   /* slow search */
10482d747510SLisandro Dalcin   N = n = options->N;
1049e5c89e4eSSatish Balay   names = options->names;
1050e5c89e4eSSatish Balay   for (i=0; i<N; i++) {
10512d747510SLisandro Dalcin     int result = PetscOptNameCmp(names[i],name);
10522d747510SLisandro Dalcin     if (!result) {
10532d747510SLisandro Dalcin       n = i; goto setvalue;
10542d747510SLisandro Dalcin     } else if (result > 0) {
10552d747510SLisandro Dalcin       n = i; break;
1056e5c89e4eSSatish Balay     }
1057e5c89e4eSSatish Balay   }
10582d747510SLisandro Dalcin   if (N >= MAXOPTIONS) return PETSC_ERR_MEM;
10592d747510SLisandro Dalcin   /* shift remaining values up 1 */
1060e5c89e4eSSatish Balay   for (i=N; i>n; i--) {
10615e8c5e88SLisandro Dalcin     options->names[i]  = options->names[i-1];
1062e5c89e4eSSatish Balay     options->values[i] = options->values[i-1];
1063e5c89e4eSSatish Balay     options->used[i]   = options->used[i-1];
1064e5c89e4eSSatish Balay   }
10652d747510SLisandro Dalcin   options->names[n]  = NULL;
10662d747510SLisandro Dalcin   options->values[n] = NULL;
10672d747510SLisandro Dalcin   options->used[n]   = PETSC_FALSE;
10682d747510SLisandro Dalcin   options->N++;
10692d747510SLisandro Dalcin 
10702d747510SLisandro Dalcin   /* destroy hash table */
10712d747510SLisandro Dalcin   kh_destroy(HO,options->ht);
10722d747510SLisandro Dalcin   options->ht = NULL;
10732d747510SLisandro Dalcin 
10742d747510SLisandro Dalcin   /* set new name */
107570d8d27cSBarry Smith   len = strlen(name);
10765e8c5e88SLisandro Dalcin   options->names[n] = (char*)malloc((len+1)*sizeof(char));
1077d49172ceSBarry Smith   if (!options->names[n]) return PETSC_ERR_MEM;
1078d49172ceSBarry Smith   strcpy(options->names[n],name);
10792d747510SLisandro Dalcin 
10802d747510SLisandro Dalcin setvalue:
10812d747510SLisandro Dalcin   /* set new value */
10822d747510SLisandro Dalcin   if (options->values[n]) free(options->values[n]);
1083d49172ceSBarry Smith   len = value ? strlen(value) : 0;
10845e8c5e88SLisandro Dalcin   if (len) {
1085e5c89e4eSSatish Balay     options->values[n] = (char*)malloc((len+1)*sizeof(char));
1086d49172ceSBarry Smith     if (!options->values[n]) return PETSC_ERR_MEM;
1087d49172ceSBarry Smith     strcpy(options->values[n],value);
10882d747510SLisandro Dalcin   } else {
10892d747510SLisandro Dalcin     options->values[n] = NULL;
10902d747510SLisandro Dalcin   }
10912d747510SLisandro Dalcin 
10922d747510SLisandro Dalcin   ierr = PetscOptionsMonitor(options,name,value?value:"");if (ierr) return ierr;
1093d49172ceSBarry Smith   return 0;
1094e5c89e4eSSatish Balay }
1095e5c89e4eSSatish Balay 
1096e5c89e4eSSatish Balay /*@C
1097e5c89e4eSSatish Balay    PetscOptionsClearValue - Clears an option name-value pair in the options
1098e5c89e4eSSatish Balay    database, overriding whatever is already present.
1099e5c89e4eSSatish Balay 
11001c9f3c13SBarry Smith    Logically Collective
1101e5c89e4eSSatish Balay 
1102e5c89e4eSSatish Balay    Input Parameter:
1103c5929fdfSBarry Smith +  options - options database, use NULL for the default global database
1104a2b725a8SWilliam Gropp -  name - name of option, this SHOULD have the - prepended
1105e5c89e4eSSatish Balay 
1106e5c89e4eSSatish Balay    Level: intermediate
1107e5c89e4eSSatish Balay 
11089666a313SBarry Smith    The collectivity of this routine is complex; only the MPI processes that call this routine will
11091c9f3c13SBarry Smith    have the affect of these options. If some processes that create objects call this routine and others do
11101c9f3c13SBarry Smith    not the code may fail in complicated ways because the same parallel solvers may incorrectly use different options
11111c9f3c13SBarry Smith    on different ranks.
11121c9f3c13SBarry Smith 
1113e5c89e4eSSatish Balay .seealso: PetscOptionsInsert()
1114e5c89e4eSSatish Balay @*/
11152d747510SLisandro Dalcin PetscErrorCode PetscOptionsClearValue(PetscOptions options,const char name[])
1116e5c89e4eSSatish Balay {
11172d747510SLisandro Dalcin   int            N,n,i;
11182d747510SLisandro Dalcin   char           **names;
1119e5c89e4eSSatish Balay   PetscErrorCode ierr;
1120e5c89e4eSSatish Balay 
1121e5c89e4eSSatish Balay   PetscFunctionBegin;
1122c5929fdfSBarry Smith   options = options ? options : defaultoptions;
11232d747510SLisandro Dalcin   if (name[0] != '-') SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Name must begin with '-': Instead %s",name);
1124e5c89e4eSSatish Balay 
11252d747510SLisandro Dalcin   /* this is so that -h and -help are equivalent (p4 does not like -help)*/
11262d747510SLisandro Dalcin   if (!strcmp(name,"-h")) name = "-help";
11272d747510SLisandro Dalcin   if (!PetscOptNameCmp(name,"-help")) options->help = PETSC_FALSE;
11282d747510SLisandro Dalcin 
11292d747510SLisandro Dalcin   name++; /* skip starting dash */
11302d747510SLisandro Dalcin 
11312d747510SLisandro Dalcin   /* slow search */
11322d747510SLisandro Dalcin   N = n = options->N;
1133e5c89e4eSSatish Balay   names = options->names;
1134e5c89e4eSSatish Balay   for (i=0; i<N; i++) {
11352d747510SLisandro Dalcin     int result = PetscOptNameCmp(names[i],name);
11362d747510SLisandro Dalcin     if (!result) {
11372d747510SLisandro Dalcin       n = i; break;
11382d747510SLisandro Dalcin     } else if (result > 0) {
11392d747510SLisandro Dalcin       n = N; break;
1140e5c89e4eSSatish Balay     }
11412d747510SLisandro Dalcin   }
11422d747510SLisandro Dalcin   if (n == N) PetscFunctionReturn(0); /* it was not present */
1143e5c89e4eSSatish Balay 
11442d747510SLisandro Dalcin   /* remove name and value */
11452d747510SLisandro Dalcin   if (options->names[n])  free(options->names[n]);
11462d747510SLisandro Dalcin   if (options->values[n]) free(options->values[n]);
1147e5c89e4eSSatish Balay   /* shift remaining values down 1 */
1148e5c89e4eSSatish Balay   for (i=n; i<N-1; i++) {
11495e8c5e88SLisandro Dalcin     options->names[i]  = options->names[i+1];
1150e5c89e4eSSatish Balay     options->values[i] = options->values[i+1];
1151e5c89e4eSSatish Balay     options->used[i]   = options->used[i+1];
1152e5c89e4eSSatish Balay   }
1153e5c89e4eSSatish Balay   options->N--;
11542d747510SLisandro Dalcin 
11552d747510SLisandro Dalcin   /* destroy hash table */
11562d747510SLisandro Dalcin   kh_destroy(HO,options->ht);
11572d747510SLisandro Dalcin   options->ht = NULL;
11582d747510SLisandro Dalcin 
11592d747510SLisandro Dalcin   ierr = PetscOptionsMonitor(options,name,NULL);CHKERRQ(ierr);
1160e5c89e4eSSatish Balay   PetscFunctionReturn(0);
1161e5c89e4eSSatish Balay }
1162e5c89e4eSSatish Balay 
1163e5c89e4eSSatish Balay /*@C
11642d747510SLisandro Dalcin    PetscOptionsFindPair - Gets an option name-value pair from the options database.
1165e5c89e4eSSatish Balay 
11662d747510SLisandro Dalcin    Not Collective
1167e5c89e4eSSatish Balay 
1168e5c89e4eSSatish Balay    Input Parameters:
11692d747510SLisandro Dalcin +  options - options database, use NULL for the default global database
11702d747510SLisandro Dalcin .  pre - the string to prepend to the name or NULL, this SHOULD NOT have the "-" prepended
11712d747510SLisandro Dalcin -  name - name of option, this SHOULD have the "-" prepended
1172e5c89e4eSSatish Balay 
11732d747510SLisandro Dalcin    Output Parameters:
11742d747510SLisandro Dalcin +  value - the option value (optional, not used for all options)
11752d747510SLisandro Dalcin -  set - whether the option is set (optional)
1176e5c89e4eSSatish Balay 
11779666a313SBarry Smith    Notes:
11789666a313SBarry Smith    Each process may find different values or no value depending on how options were inserted into the database
11791c9f3c13SBarry Smith 
11802d747510SLisandro Dalcin    Level: developer
11812d747510SLisandro Dalcin 
11822d747510SLisandro Dalcin .seealso: PetscOptionsSetValue(), PetscOptionsClearValue()
1183e5c89e4eSSatish Balay @*/
11842d747510SLisandro Dalcin PetscErrorCode PetscOptionsFindPair(PetscOptions options,const char pre[],const char name[],const char *value[],PetscBool *set)
1185e5c89e4eSSatish Balay {
11862d747510SLisandro Dalcin   char           buf[MAXOPTNAME];
1187daabea38SBarry Smith   PetscBool      usehashtable = PETSC_TRUE;
11882d747510SLisandro Dalcin   PetscBool      matchnumbers = PETSC_TRUE;
1189e5c89e4eSSatish Balay   PetscErrorCode ierr;
1190e5c89e4eSSatish Balay 
1191e5c89e4eSSatish Balay   PetscFunctionBegin;
1192c5929fdfSBarry Smith   options = options ? options : defaultoptions;
11932d747510SLisandro Dalcin   if (pre && PetscUnlikely(pre[0] == '-')) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Prefix cannot begin with '-': Instead %s",pre);
11942d747510SLisandro Dalcin   if (PetscUnlikely(name[0] != '-')) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Name must begin with '-': Instead %s",name);
1195e5c89e4eSSatish Balay 
11962d747510SLisandro Dalcin   name++; /* skip starting dash */
1197e5c89e4eSSatish Balay 
11987cd08cecSJed Brown   /* append prefix to name, if prefix="foo_" and option='--bar", prefixed option is --foo_bar */
11992d747510SLisandro Dalcin   if (pre && pre[0]) {
12002d747510SLisandro Dalcin     char *ptr = buf;
12012d747510SLisandro Dalcin     if (name[0] == '-') { *ptr++ = '-';  name++; }
12022d747510SLisandro Dalcin     ierr = PetscStrncpy(ptr,pre,buf+sizeof(buf)-ptr);CHKERRQ(ierr);
12032d747510SLisandro Dalcin     ierr = PetscStrlcat(buf,name,sizeof(buf));CHKERRQ(ierr);
12042d747510SLisandro Dalcin     name = buf;
12057cd08cecSJed Brown   }
12062d747510SLisandro Dalcin 
120776bd3646SJed Brown   if (PetscDefined(USE_DEBUG)) {
12082f828895SJed Brown     PetscBool valid;
12092d747510SLisandro Dalcin     char      key[MAXOPTNAME+1] = "-";
12102d747510SLisandro Dalcin     ierr = PetscStrncpy(key+1,name,sizeof(key)-1);CHKERRQ(ierr);
12112f828895SJed Brown     ierr = PetscOptionsValidKey(key,&valid);CHKERRQ(ierr);
12122f828895SJed Brown     if (!valid) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Invalid option '%s' obtained from pre='%s' and name='%s'",key,pre?pre:"",name);
12132f828895SJed Brown   }
1214e5c89e4eSSatish Balay 
12152d747510SLisandro Dalcin   if (!options->ht && usehashtable) {
12162d747510SLisandro Dalcin     int i,ret;
12172d747510SLisandro Dalcin     khiter_t it;
12182d747510SLisandro Dalcin     khash_t(HO) *ht;
12192d747510SLisandro Dalcin     ht = kh_init(HO);
12202d747510SLisandro Dalcin     if (PetscUnlikely(!ht)) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Hash table allocation failed");
12212d747510SLisandro Dalcin     ret = kh_resize(HO,ht,options->N*2); /* twice the required size to reduce risk of collisions */
12222d747510SLisandro Dalcin     if (PetscUnlikely(ret)) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Hash table allocation failed");
12232d747510SLisandro Dalcin     for (i=0; i<options->N; i++) {
12242d747510SLisandro Dalcin       it = kh_put(HO,ht,options->names[i],&ret);
12252d747510SLisandro Dalcin       if (PetscUnlikely(ret != 1)) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Hash table allocation failed");
12262d747510SLisandro Dalcin       kh_val(ht,it) = i;
12272d747510SLisandro Dalcin     }
12282d747510SLisandro Dalcin     options->ht = ht;
12292d747510SLisandro Dalcin   }
12302d747510SLisandro Dalcin 
12312d747510SLisandro Dalcin   if (usehashtable)
12322d747510SLisandro Dalcin   { /* fast search */
12332d747510SLisandro Dalcin     khash_t(HO) *ht = options->ht;
12342d747510SLisandro Dalcin     khiter_t it = kh_get(HO,ht,name);
12352d747510SLisandro Dalcin     if (it != kh_end(ht)) {
12362d747510SLisandro Dalcin       int i = kh_val(ht,it);
1237e5c89e4eSSatish Balay       options->used[i]  = PETSC_TRUE;
12382d747510SLisandro Dalcin       if (value) *value = options->values[i];
12392d747510SLisandro Dalcin       if (set)   *set   = PETSC_TRUE;
12402d747510SLisandro Dalcin       PetscFunctionReturn(0);
12412d747510SLisandro Dalcin     }
12422d747510SLisandro Dalcin   } else
12432d747510SLisandro Dalcin   { /* slow search */
12442d747510SLisandro Dalcin     int i, N = options->N;
12452d747510SLisandro Dalcin     for (i=0; i<N; i++) {
1246daabea38SBarry Smith       int result = PetscOptNameCmp(options->names[i],name);
12472d747510SLisandro Dalcin       if (!result) {
12482d747510SLisandro Dalcin         options->used[i]  = PETSC_TRUE;
12492d747510SLisandro Dalcin         if (value) *value = options->values[i];
12502d747510SLisandro Dalcin         if (set)   *set   = PETSC_TRUE;
12512d747510SLisandro Dalcin         PetscFunctionReturn(0);
12522d747510SLisandro Dalcin       } else if (result > 0) {
1253e5c89e4eSSatish Balay         break;
1254e5c89e4eSSatish Balay       }
1255e5c89e4eSSatish Balay     }
12562d747510SLisandro Dalcin   }
12572d747510SLisandro Dalcin 
12582d747510SLisandro Dalcin   /*
12592d747510SLisandro Dalcin    The following block slows down all lookups in the most frequent path (most lookups are unsuccessful).
12602d747510SLisandro Dalcin    Maybe this special lookup mode should be enabled on request with a push/pop API.
12612d747510SLisandro Dalcin    The feature of matching _%d_ used sparingly in the codebase.
12622d747510SLisandro Dalcin    */
12632d747510SLisandro Dalcin   if (matchnumbers) {
12642d747510SLisandro Dalcin     int i,j,cnt = 0,locs[16],loce[16];
1265e5c89e4eSSatish Balay     /* determine the location and number of all _%d_ in the key */
12662d747510SLisandro Dalcin     for (i=0; name[i]; i++) {
12672d747510SLisandro Dalcin       if (name[i] == '_') {
12682d747510SLisandro Dalcin         for (j=i+1; name[j]; j++) {
12692d747510SLisandro Dalcin           if (name[j] >= '0' && name[j] <= '9') continue;
12702d747510SLisandro Dalcin           if (name[j] == '_' && j > i+1) { /* found a number */
1271e5c89e4eSSatish Balay             locs[cnt]   = i+1;
1272e5c89e4eSSatish Balay             loce[cnt++] = j+1;
1273e5c89e4eSSatish Balay           }
12742d747510SLisandro Dalcin           i = j-1;
1275e5c89e4eSSatish Balay           break;
1276e5c89e4eSSatish Balay         }
1277e5c89e4eSSatish Balay       }
1278e5c89e4eSSatish Balay     }
1279e5c89e4eSSatish Balay     for (i=0; i<cnt; i++) {
12802d747510SLisandro Dalcin       PetscBool found;
12812d747510SLisandro Dalcin       char      opt[MAXOPTNAME+1] = "-", tmp[MAXOPTNAME];
12822d747510SLisandro Dalcin       ierr = PetscStrncpy(tmp,name,PetscMin((size_t)(locs[i]+1),sizeof(tmp)));CHKERRQ(ierr);
12832d747510SLisandro Dalcin       ierr = PetscStrlcat(opt,tmp,sizeof(opt));CHKERRQ(ierr);
12842d747510SLisandro Dalcin       ierr = PetscStrlcat(opt,name+loce[i],sizeof(opt));CHKERRQ(ierr);
12852d747510SLisandro Dalcin       ierr = PetscOptionsFindPair(options,NULL,opt,value,&found);CHKERRQ(ierr);
12862d747510SLisandro Dalcin       if (found) {if (set) *set = PETSC_TRUE; PetscFunctionReturn(0);}
1287e5c89e4eSSatish Balay     }
1288e5c89e4eSSatish Balay   }
12892d747510SLisandro Dalcin 
12902d747510SLisandro Dalcin   if (set) *set = PETSC_FALSE;
1291e5c89e4eSSatish Balay   PetscFunctionReturn(0);
1292e5c89e4eSSatish Balay }
1293e5c89e4eSSatish Balay 
1294d6ced9c0SMatthew G. Knepley /* Check whether any option begins with pre+name */
12952d747510SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscOptionsFindPairPrefix_Private(PetscOptions options,const char pre[], const char name[],const char *value[],PetscBool *set)
1296514bf10dSMatthew G Knepley {
12972d747510SLisandro Dalcin   char           buf[MAXOPTNAME];
1298d6ced9c0SMatthew G. Knepley   int            numCnt = 0, locs[16],loce[16];
1299514bf10dSMatthew G Knepley   PetscErrorCode ierr;
1300514bf10dSMatthew G Knepley 
1301514bf10dSMatthew G Knepley   PetscFunctionBegin;
1302c5929fdfSBarry Smith   options = options ? options : defaultoptions;
13032d747510SLisandro Dalcin   if (pre && pre[0] == '-') SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Prefix cannot begin with '-': Instead %s",pre);
13042d747510SLisandro Dalcin   if (name[0] != '-') SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Name must begin with '-': Instead %s",name);
1305514bf10dSMatthew G Knepley 
13062d747510SLisandro Dalcin   name++; /* skip starting dash */
1307514bf10dSMatthew G Knepley 
1308514bf10dSMatthew G Knepley   /* append prefix to name, if prefix="foo_" and option='--bar", prefixed option is --foo_bar */
13092d747510SLisandro Dalcin   if (pre && pre[0]) {
13102d747510SLisandro Dalcin     char *ptr = buf;
13112d747510SLisandro Dalcin     if (name[0] == '-') { *ptr++ = '-';  name++; }
13122d747510SLisandro Dalcin     ierr = PetscStrncpy(ptr,pre,sizeof(buf)+(size_t)(ptr-buf));CHKERRQ(ierr);
13132d747510SLisandro Dalcin     ierr = PetscStrlcat(buf,name,sizeof(buf));CHKERRQ(ierr);
13142d747510SLisandro Dalcin     name = buf;
1315514bf10dSMatthew G Knepley   }
13162d747510SLisandro Dalcin 
131776bd3646SJed Brown   if (PetscDefined(USE_DEBUG)) {
1318514bf10dSMatthew G Knepley     PetscBool valid;
13192d747510SLisandro Dalcin     char      key[MAXOPTNAME+1] = "-";
13202d747510SLisandro Dalcin     ierr = PetscStrncpy(key+1,name,sizeof(key)-1);CHKERRQ(ierr);
1321514bf10dSMatthew G Knepley     ierr = PetscOptionsValidKey(key,&valid);CHKERRQ(ierr);
1322514bf10dSMatthew G Knepley     if (!valid) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Invalid option '%s' obtained from pre='%s' and name='%s'",key,pre?pre:"",name);
1323514bf10dSMatthew G Knepley   }
1324514bf10dSMatthew G Knepley 
1325d6ced9c0SMatthew G. Knepley   /* determine the location and number of all _%d_ in the key */
1326d6ced9c0SMatthew G. Knepley   {
1327d6ced9c0SMatthew G. Knepley     int i,j;
1328d6ced9c0SMatthew G. Knepley     for (i=0; name[i]; i++) {
1329d6ced9c0SMatthew G. Knepley       if (name[i] == '_') {
1330d6ced9c0SMatthew G. Knepley         for (j=i+1; name[j]; j++) {
1331d6ced9c0SMatthew G. Knepley           if (name[j] >= '0' && name[j] <= '9') continue;
1332d6ced9c0SMatthew G. Knepley           if (name[j] == '_' && j > i+1) { /* found a number */
1333d6ced9c0SMatthew G. Knepley             locs[numCnt]   = i+1;
1334d6ced9c0SMatthew G. Knepley             loce[numCnt++] = j+1;
1335d6ced9c0SMatthew G. Knepley           }
1336d6ced9c0SMatthew G. Knepley           i = j-1;
1337d6ced9c0SMatthew G. Knepley           break;
1338d6ced9c0SMatthew G. Knepley         }
1339d6ced9c0SMatthew G. Knepley       }
1340d6ced9c0SMatthew G. Knepley     }
1341d6ced9c0SMatthew G. Knepley   }
1342d6ced9c0SMatthew G. Knepley 
13432d747510SLisandro Dalcin   { /* slow search */
1344d6ced9c0SMatthew G. Knepley     int       c, i;
13452d747510SLisandro Dalcin     size_t    len;
13462d747510SLisandro Dalcin     PetscBool match;
1347d6ced9c0SMatthew G. Knepley 
1348d6ced9c0SMatthew G. Knepley     for (c = -1; c < numCnt; ++c) {
1349d6ced9c0SMatthew G. Knepley       char opt[MAXOPTNAME+1] = "", tmp[MAXOPTNAME];
1350d6ced9c0SMatthew G. Knepley 
1351d6ced9c0SMatthew G. Knepley       if (c < 0) {
1352d6ced9c0SMatthew G. Knepley         ierr = PetscStrcpy(opt,name);CHKERRQ(ierr);
1353d6ced9c0SMatthew G. Knepley       } else {
1354d6ced9c0SMatthew G. Knepley         ierr = PetscStrncpy(tmp,name,PetscMin((size_t)(locs[c]+1),sizeof(tmp)));CHKERRQ(ierr);
1355d6ced9c0SMatthew G. Knepley         ierr = PetscStrlcat(opt,tmp,sizeof(opt));CHKERRQ(ierr);
1356d6ced9c0SMatthew G. Knepley         ierr = PetscStrlcat(opt,name+loce[c],sizeof(opt));CHKERRQ(ierr);
1357d6ced9c0SMatthew G. Knepley       }
1358d6ced9c0SMatthew G. Knepley       ierr = PetscStrlen(opt,&len);CHKERRQ(ierr);
13592d747510SLisandro Dalcin       for (i=0; i<options->N; i++) {
1360d6ced9c0SMatthew G. Knepley         ierr = PetscStrncmp(options->names[i],opt,len,&match);CHKERRQ(ierr);
1361514bf10dSMatthew G Knepley         if (match) {
1362514bf10dSMatthew G Knepley           options->used[i]  = PETSC_TRUE;
13632d747510SLisandro Dalcin           if (value) *value = options->values[i];
13642d747510SLisandro Dalcin           if (set)   *set   = PETSC_TRUE;
13652d747510SLisandro Dalcin           PetscFunctionReturn(0);
1366514bf10dSMatthew G Knepley         }
1367514bf10dSMatthew G Knepley       }
13682d747510SLisandro Dalcin     }
1369d6ced9c0SMatthew G. Knepley   }
13702d747510SLisandro Dalcin 
13712d747510SLisandro Dalcin   if (set) *set = PETSC_FALSE;
1372514bf10dSMatthew G Knepley   PetscFunctionReturn(0);
1373514bf10dSMatthew G Knepley }
1374514bf10dSMatthew G Knepley 
1375e5c89e4eSSatish Balay /*@C
1376e5c89e4eSSatish Balay    PetscOptionsReject - Generates an error if a certain option is given.
1377e5c89e4eSSatish Balay 
13781c9f3c13SBarry Smith    Not Collective
1379e5c89e4eSSatish Balay 
1380e5c89e4eSSatish Balay    Input Parameters:
13815c9cc608SHong Zhang +  options - options database, use NULL for default global database
13822d747510SLisandro Dalcin .  pre - the option prefix (may be NULL)
13832d747510SLisandro Dalcin .  name - the option name one is seeking
13840298fd71SBarry Smith -  mess - error message (may be NULL)
1385e5c89e4eSSatish Balay 
1386e5c89e4eSSatish Balay    Level: advanced
1387e5c89e4eSSatish Balay 
1388e5c89e4eSSatish Balay .seealso: PetscOptionsGetInt(), PetscOptionsGetReal(),OptionsHasName(),
1389acfcf0e5SJed Brown           PetscOptionsGetString(), PetscOptionsGetIntArray(), PetscOptionsGetRealArray(), PetscOptionsBool(),
1390e5c89e4eSSatish Balay           PetscOptionsName(), PetscOptionsBegin(), PetscOptionsEnd(), PetscOptionsHead(),
1391e5c89e4eSSatish Balay           PetscOptionsStringArray(),PetscOptionsRealArray(), PetscOptionsScalar(),
1392acfcf0e5SJed Brown           PetscOptionsBoolGroupBegin(), PetscOptionsBoolGroup(), PetscOptionsBoolGroupEnd(),
1393a264d7a6SBarry Smith           PetscOptionsFList(), PetscOptionsEList()
1394e5c89e4eSSatish Balay @*/
13952d747510SLisandro Dalcin PetscErrorCode PetscOptionsReject(PetscOptions options,const char pre[],const char name[],const char mess[])
1396e5c89e4eSSatish Balay {
1397e5c89e4eSSatish Balay   PetscErrorCode ierr;
1398ace3abfcSBarry Smith   PetscBool      flag = PETSC_FALSE;
1399e5c89e4eSSatish Balay 
1400e5c89e4eSSatish Balay   PetscFunctionBegin;
14012d747510SLisandro Dalcin   ierr = PetscOptionsHasName(options,pre,name,&flag);CHKERRQ(ierr);
1402e5c89e4eSSatish Balay   if (flag) {
14032d747510SLisandro Dalcin     if (mess && mess[0]) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Program has disabled option: -%s%s with %s",pre?pre:"",name+1,mess);
14042d747510SLisandro Dalcin     else SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Program has disabled option: -%s%s",pre?pre:"",name+1);
1405e5c89e4eSSatish Balay   }
1406e5c89e4eSSatish Balay   PetscFunctionReturn(0);
1407e5c89e4eSSatish Balay }
1408e5c89e4eSSatish Balay 
1409e5c89e4eSSatish Balay /*@C
14102d747510SLisandro Dalcin    PetscOptionsHasHelp - Determines whether the "-help" option is in the database.
14112d747510SLisandro Dalcin 
14122d747510SLisandro Dalcin    Not Collective
14132d747510SLisandro Dalcin 
14142d747510SLisandro Dalcin    Input Parameters:
14152d747510SLisandro Dalcin .  options - options database, use NULL for default global database
14162d747510SLisandro Dalcin 
14172d747510SLisandro Dalcin    Output Parameters:
14182d747510SLisandro Dalcin .  set - PETSC_TRUE if found else PETSC_FALSE.
14192d747510SLisandro Dalcin 
14202d747510SLisandro Dalcin    Level: advanced
14212d747510SLisandro Dalcin 
14222d747510SLisandro Dalcin .seealso: PetscOptionsHasName()
14232d747510SLisandro Dalcin @*/
14242d747510SLisandro Dalcin PetscErrorCode PetscOptionsHasHelp(PetscOptions options,PetscBool *set)
14252d747510SLisandro Dalcin {
14262d747510SLisandro Dalcin   PetscFunctionBegin;
14272d747510SLisandro Dalcin   PetscValidPointer(set,2);
14282d747510SLisandro Dalcin   options = options ? options : defaultoptions;
14292d747510SLisandro Dalcin   *set = options->help;
14302d747510SLisandro Dalcin   PetscFunctionReturn(0);
14312d747510SLisandro Dalcin }
14322d747510SLisandro Dalcin 
14332d747510SLisandro Dalcin /*@C
143490d69ab7SBarry Smith    PetscOptionsHasName - Determines whether a certain option is given in the database. This returns true whether the option is a number, string or boolean, even
143590d69ab7SBarry Smith                       its value is set to false.
1436e5c89e4eSSatish Balay 
1437e5c89e4eSSatish Balay    Not Collective
1438e5c89e4eSSatish Balay 
1439e5c89e4eSSatish Balay    Input Parameters:
14405c9cc608SHong Zhang +  options - options database, use NULL for default global database
14413de71b31SHong Zhang .  pre - string to prepend to the name or NULL
14423de71b31SHong Zhang -  name - the option one is seeking
1443e5c89e4eSSatish Balay 
1444e5c89e4eSSatish Balay    Output Parameters:
144596ef3cdfSSatish Balay .  set - PETSC_TRUE if found else PETSC_FALSE.
1446e5c89e4eSSatish Balay 
1447e5c89e4eSSatish Balay    Level: beginner
1448e5c89e4eSSatish Balay 
144995452b02SPatrick Sanan    Notes:
14502d747510SLisandro Dalcin    Name cannot be simply "-h".
1451431c96f7SBarry Smith 
1452acfcf0e5SJed Brown    In many cases you probably want to use PetscOptionsGetBool() instead of calling this, to allowing toggling values.
145390d69ab7SBarry Smith 
1454e5c89e4eSSatish Balay .seealso: PetscOptionsGetInt(), PetscOptionsGetReal(),
1455f3e3d7dfSBarry Smith           PetscOptionsGetString(), PetscOptionsGetIntArray(), PetscOptionsGetRealArray(), PetscOptionsBool(),
1456e5c89e4eSSatish Balay           PetscOptionsName(), PetscOptionsBegin(), PetscOptionsEnd(), PetscOptionsHead(),
1457e5c89e4eSSatish Balay           PetscOptionsStringArray(),PetscOptionsRealArray(), PetscOptionsScalar(),
1458acfcf0e5SJed Brown           PetscOptionsBoolGroupBegin(), PetscOptionsBoolGroup(), PetscOptionsBoolGroupEnd(),
1459a264d7a6SBarry Smith           PetscOptionsFList(), PetscOptionsEList()
1460e5c89e4eSSatish Balay @*/
1461c5929fdfSBarry Smith PetscErrorCode PetscOptionsHasName(PetscOptions options,const char pre[],const char name[],PetscBool *set)
1462e5c89e4eSSatish Balay {
14632d747510SLisandro Dalcin   const char     *value;
1464e5c89e4eSSatish Balay   PetscErrorCode ierr;
1465ace3abfcSBarry Smith   PetscBool      flag;
1466e5c89e4eSSatish Balay 
1467e5c89e4eSSatish Balay   PetscFunctionBegin;
14682d747510SLisandro Dalcin   ierr = PetscOptionsFindPair(options,pre,name,&value,&flag);CHKERRQ(ierr);
146996ef3cdfSSatish Balay   if (set) *set = flag;
1470e5c89e4eSSatish Balay   PetscFunctionReturn(0);
1471e5c89e4eSSatish Balay }
1472e5c89e4eSSatish Balay 
1473e5c89e4eSSatish Balay /*@C
14742d747510SLisandro Dalcin    PetscOptionsGetAll - Lists all the options the program was run with in a single string.
14752d747510SLisandro Dalcin 
14762d747510SLisandro Dalcin    Not Collective
14772d747510SLisandro Dalcin 
1478fd292e60Sprj-    Input Parameter:
14792d747510SLisandro Dalcin .  options - the options database, use NULL for the default global database
14802d747510SLisandro Dalcin 
14812d747510SLisandro Dalcin    Output Parameter:
14822d747510SLisandro Dalcin .  copts - pointer where string pointer is stored
14832d747510SLisandro Dalcin 
14842d747510SLisandro Dalcin    Notes:
14851c9f3c13SBarry Smith     The array and each entry in the array should be freed with PetscFree()
14861c9f3c13SBarry Smith     Each process may have different values depending on how the options were inserted into the database
14872d747510SLisandro Dalcin 
14882d747510SLisandro Dalcin    Level: advanced
14892d747510SLisandro Dalcin 
14901c9f3c13SBarry Smith .seealso: PetscOptionsAllUsed(), PetscOptionsView(), PetscOptionsPush(), PetscOptionsPop()
14912d747510SLisandro Dalcin @*/
14922d747510SLisandro Dalcin PetscErrorCode PetscOptionsGetAll(PetscOptions options,char *copts[])
14932d747510SLisandro Dalcin {
14942d747510SLisandro Dalcin   PetscErrorCode ierr;
14952d747510SLisandro Dalcin   PetscInt       i;
14962d747510SLisandro Dalcin   size_t         len = 1,lent = 0;
14972d747510SLisandro Dalcin   char           *coptions = NULL;
14982d747510SLisandro Dalcin 
14992d747510SLisandro Dalcin   PetscFunctionBegin;
15002d747510SLisandro Dalcin   PetscValidPointer(copts,2);
15012d747510SLisandro Dalcin   options = options ? options : defaultoptions;
15022d747510SLisandro Dalcin   /* count the length of the required string */
15032d747510SLisandro Dalcin   for (i=0; i<options->N; i++) {
15042d747510SLisandro Dalcin     ierr = PetscStrlen(options->names[i],&lent);CHKERRQ(ierr);
15052d747510SLisandro Dalcin     len += 2 + lent;
15062d747510SLisandro Dalcin     if (options->values[i]) {
15072d747510SLisandro Dalcin       ierr = PetscStrlen(options->values[i],&lent);CHKERRQ(ierr);
15082d747510SLisandro Dalcin       len += 1 + lent;
15092d747510SLisandro Dalcin     }
15102d747510SLisandro Dalcin   }
15112d747510SLisandro Dalcin   ierr = PetscMalloc1(len,&coptions);CHKERRQ(ierr);
15122d747510SLisandro Dalcin   coptions[0] = 0;
15132d747510SLisandro Dalcin   for (i=0; i<options->N; i++) {
15142d747510SLisandro Dalcin     ierr = PetscStrcat(coptions,"-");CHKERRQ(ierr);
15152d747510SLisandro Dalcin     ierr = PetscStrcat(coptions,options->names[i]);CHKERRQ(ierr);
15162d747510SLisandro Dalcin     ierr = PetscStrcat(coptions," ");CHKERRQ(ierr);
15172d747510SLisandro Dalcin     if (options->values[i]) {
15182d747510SLisandro Dalcin       ierr = PetscStrcat(coptions,options->values[i]);CHKERRQ(ierr);
15192d747510SLisandro Dalcin       ierr = PetscStrcat(coptions," ");CHKERRQ(ierr);
15202d747510SLisandro Dalcin     }
15212d747510SLisandro Dalcin   }
15222d747510SLisandro Dalcin   *copts = coptions;
15232d747510SLisandro Dalcin   PetscFunctionReturn(0);
15242d747510SLisandro Dalcin }
15252d747510SLisandro Dalcin 
15262d747510SLisandro Dalcin /*@C
15272d747510SLisandro Dalcin    PetscOptionsUsed - Indicates if PETSc has used a particular option set in the database
15282d747510SLisandro Dalcin 
15292d747510SLisandro Dalcin    Not Collective
15302d747510SLisandro Dalcin 
15312d747510SLisandro Dalcin    Input Parameter:
15322d747510SLisandro Dalcin +  options - options database, use NULL for default global database
15332d747510SLisandro Dalcin -  name - string name of option
15342d747510SLisandro Dalcin 
15352d747510SLisandro Dalcin    Output Parameter:
15362d747510SLisandro Dalcin .  used - PETSC_TRUE if the option was used, otherwise false, including if option was not found in options database
15372d747510SLisandro Dalcin 
15382d747510SLisandro Dalcin    Level: advanced
15392d747510SLisandro Dalcin 
15409666a313SBarry Smith    Notes:
15419666a313SBarry Smith    The value returned may be different on each process and depends on which options have been processed
15421c9f3c13SBarry Smith    on the given process
15431c9f3c13SBarry Smith 
15442d747510SLisandro Dalcin .seealso: PetscOptionsView(), PetscOptionsLeft(), PetscOptionsAllUsed()
15452d747510SLisandro Dalcin @*/
15462d747510SLisandro Dalcin PetscErrorCode PetscOptionsUsed(PetscOptions options,const char *name,PetscBool *used)
15472d747510SLisandro Dalcin {
15482d747510SLisandro Dalcin   PetscInt       i;
15492d747510SLisandro Dalcin   PetscErrorCode ierr;
15502d747510SLisandro Dalcin 
15512d747510SLisandro Dalcin   PetscFunctionBegin;
15522d747510SLisandro Dalcin   PetscValidCharPointer(name,2);
15532d747510SLisandro Dalcin   PetscValidPointer(used,3);
15542d747510SLisandro Dalcin   options = options ? options : defaultoptions;
15552d747510SLisandro Dalcin   *used = PETSC_FALSE;
15562d747510SLisandro Dalcin   for (i=0; i<options->N; i++) {
15572d747510SLisandro Dalcin     ierr = PetscStrcmp(options->names[i],name,used);CHKERRQ(ierr);
15582d747510SLisandro Dalcin     if (*used) {
15592d747510SLisandro Dalcin       *used = options->used[i];
15602d747510SLisandro Dalcin       break;
15612d747510SLisandro Dalcin     }
15622d747510SLisandro Dalcin   }
15632d747510SLisandro Dalcin   PetscFunctionReturn(0);
15642d747510SLisandro Dalcin }
15652d747510SLisandro Dalcin 
1566487a658cSBarry Smith /*@
15672d747510SLisandro Dalcin    PetscOptionsAllUsed - Returns a count of the number of options in the
15682d747510SLisandro Dalcin    database that have never been selected.
15692d747510SLisandro Dalcin 
15702d747510SLisandro Dalcin    Not Collective
15712d747510SLisandro Dalcin 
15722d747510SLisandro Dalcin    Input Parameter:
15732d747510SLisandro Dalcin .  options - options database, use NULL for default global database
15742d747510SLisandro Dalcin 
15752d747510SLisandro Dalcin    Output Parameter:
15762d747510SLisandro Dalcin .  N - count of options not used
15772d747510SLisandro Dalcin 
15782d747510SLisandro Dalcin    Level: advanced
15792d747510SLisandro Dalcin 
15809666a313SBarry Smith    Notes:
15819666a313SBarry Smith    The value returned may be different on each process and depends on which options have been processed
15821c9f3c13SBarry Smith    on the given process
15831c9f3c13SBarry Smith 
15842d747510SLisandro Dalcin .seealso: PetscOptionsView()
15852d747510SLisandro Dalcin @*/
15862d747510SLisandro Dalcin PetscErrorCode PetscOptionsAllUsed(PetscOptions options,PetscInt *N)
15872d747510SLisandro Dalcin {
15882d747510SLisandro Dalcin   PetscInt     i,n = 0;
15892d747510SLisandro Dalcin 
15902d747510SLisandro Dalcin   PetscFunctionBegin;
15912d747510SLisandro Dalcin   PetscValidIntPointer(N,2);
15922d747510SLisandro Dalcin   options = options ? options : defaultoptions;
15932d747510SLisandro Dalcin   for (i=0; i<options->N; i++) {
15942d747510SLisandro Dalcin     if (!options->used[i]) n++;
15952d747510SLisandro Dalcin   }
15962d747510SLisandro Dalcin   *N = n;
15972d747510SLisandro Dalcin   PetscFunctionReturn(0);
15982d747510SLisandro Dalcin }
15992d747510SLisandro Dalcin 
1600487a658cSBarry Smith /*@
16012d747510SLisandro Dalcin    PetscOptionsLeft - Prints to screen any options that were set and never used.
16022d747510SLisandro Dalcin 
16032d747510SLisandro Dalcin    Not Collective
16042d747510SLisandro Dalcin 
16052d747510SLisandro Dalcin    Input Parameter:
16062d747510SLisandro Dalcin .  options - options database; use NULL for default global database
16072d747510SLisandro Dalcin 
16082d747510SLisandro Dalcin    Options Database Key:
16093c6db4c4SPierre Jolivet .  -options_left - activates PetscOptionsAllUsed() within PetscFinalize()
16102d747510SLisandro Dalcin 
16113de2bfdfSBarry Smith    Notes:
16123de2bfdfSBarry Smith       This is rarely used directly, it is called by PetscFinalize() in debug more or if -options_left
16131c9f3c13SBarry Smith       is passed otherwise to help users determine possible mistakes in their usage of options. This
16141c9f3c13SBarry Smith       only prints values on process zero of PETSC_COMM_WORLD. Other processes depending the objects
16151c9f3c13SBarry Smith       used may have different options that are left unused.
16163de2bfdfSBarry Smith 
16172d747510SLisandro Dalcin    Level: advanced
16182d747510SLisandro Dalcin 
16192d747510SLisandro Dalcin .seealso: PetscOptionsAllUsed()
16202d747510SLisandro Dalcin @*/
16212d747510SLisandro Dalcin PetscErrorCode PetscOptionsLeft(PetscOptions options)
16222d747510SLisandro Dalcin {
16232d747510SLisandro Dalcin   PetscErrorCode ierr;
16242d747510SLisandro Dalcin   PetscInt       i;
16253de2bfdfSBarry Smith   PetscInt       cnt = 0;
16263de2bfdfSBarry Smith   PetscOptions   toptions;
16272d747510SLisandro Dalcin 
16282d747510SLisandro Dalcin   PetscFunctionBegin;
16293de2bfdfSBarry Smith   toptions = options ? options : defaultoptions;
16303de2bfdfSBarry Smith   for (i=0; i<toptions->N; i++) {
16313de2bfdfSBarry Smith     if (!toptions->used[i]) {
16323de2bfdfSBarry Smith       if (toptions->values[i]) {
16333de2bfdfSBarry Smith         ierr = PetscPrintf(PETSC_COMM_WORLD,"Option left: name:-%s value: %s\n",toptions->names[i],toptions->values[i]);CHKERRQ(ierr);
16342d747510SLisandro Dalcin       } else {
16353de2bfdfSBarry Smith         ierr = PetscPrintf(PETSC_COMM_WORLD,"Option left: name:-%s (no value)\n",toptions->names[i]);CHKERRQ(ierr);
16362d747510SLisandro Dalcin       }
16372d747510SLisandro Dalcin     }
16382d747510SLisandro Dalcin   }
16393de2bfdfSBarry Smith   if (!options) {
16403de2bfdfSBarry Smith     toptions = defaultoptions;
16413de2bfdfSBarry Smith     while (toptions->previous) {
16423de2bfdfSBarry Smith       cnt++;
16433de2bfdfSBarry Smith       toptions = toptions->previous;
16443de2bfdfSBarry Smith     }
16453de2bfdfSBarry Smith     if (cnt) {
16463de2bfdfSBarry Smith       ierr = PetscPrintf(PETSC_COMM_WORLD,"Option left: You may have forgotten some calls to PetscOptionsPop(),\n             PetscOptionsPop() has been called %D less times than PetscOptionsPush()\n",cnt);CHKERRQ(ierr);
16473de2bfdfSBarry Smith     }
16483de2bfdfSBarry Smith   }
16492d747510SLisandro Dalcin   PetscFunctionReturn(0);
16502d747510SLisandro Dalcin }
16512d747510SLisandro Dalcin 
16522d747510SLisandro Dalcin /*@C
16532d747510SLisandro Dalcin    PetscOptionsLeftGet - Returns all options that were set and never used.
16542d747510SLisandro Dalcin 
16552d747510SLisandro Dalcin    Not Collective
16562d747510SLisandro Dalcin 
16572d747510SLisandro Dalcin    Input Parameter:
16582d747510SLisandro Dalcin .  options - options database, use NULL for default global database
16592d747510SLisandro Dalcin 
16602d747510SLisandro Dalcin    Output Parameter:
1661a2b725a8SWilliam Gropp +  N - count of options not used
16622d747510SLisandro Dalcin .  names - names of options not used
1663a2b725a8SWilliam Gropp -  values - values of options not used
16642d747510SLisandro Dalcin 
16652d747510SLisandro Dalcin    Level: advanced
16662d747510SLisandro Dalcin 
16672d747510SLisandro Dalcin    Notes:
16682d747510SLisandro Dalcin    Users should call PetscOptionsLeftRestore() to free the memory allocated in this routine
16691c9f3c13SBarry Smith    Notes: The value returned may be different on each process and depends on which options have been processed
16701c9f3c13SBarry Smith    on the given process
16712d747510SLisandro Dalcin 
16722d747510SLisandro Dalcin .seealso: PetscOptionsAllUsed(), PetscOptionsLeft()
16732d747510SLisandro Dalcin @*/
16742d747510SLisandro Dalcin PetscErrorCode PetscOptionsLeftGet(PetscOptions options,PetscInt *N,char **names[],char **values[])
16752d747510SLisandro Dalcin {
16762d747510SLisandro Dalcin   PetscErrorCode ierr;
16772d747510SLisandro Dalcin   PetscInt       i,n;
16782d747510SLisandro Dalcin 
16792d747510SLisandro Dalcin   PetscFunctionBegin;
16802d747510SLisandro Dalcin   if (N) PetscValidIntPointer(N,2);
16812d747510SLisandro Dalcin   if (names) PetscValidPointer(names,3);
16822d747510SLisandro Dalcin   if (values) PetscValidPointer(values,4);
16832d747510SLisandro Dalcin   options = options ? options : defaultoptions;
16842d747510SLisandro Dalcin 
16852d747510SLisandro Dalcin   /* The number of unused PETSc options */
16862d747510SLisandro Dalcin   n = 0;
16872d747510SLisandro Dalcin   for (i=0; i<options->N; i++) {
16882d747510SLisandro Dalcin     if (!options->used[i]) n++;
16892d747510SLisandro Dalcin   }
16902d747510SLisandro Dalcin   if (N) { *N = n; }
16912d747510SLisandro Dalcin   if (names)  { ierr = PetscMalloc1(n,names);CHKERRQ(ierr); }
16922d747510SLisandro Dalcin   if (values) { ierr = PetscMalloc1(n,values);CHKERRQ(ierr); }
16932d747510SLisandro Dalcin 
16942d747510SLisandro Dalcin   n = 0;
16952d747510SLisandro Dalcin   if (names || values) {
16962d747510SLisandro Dalcin     for (i=0; i<options->N; i++) {
16972d747510SLisandro Dalcin       if (!options->used[i]) {
16982d747510SLisandro Dalcin         if (names)  (*names)[n]  = options->names[i];
16992d747510SLisandro Dalcin         if (values) (*values)[n] = options->values[i];
17002d747510SLisandro Dalcin         n++;
17012d747510SLisandro Dalcin       }
17022d747510SLisandro Dalcin     }
17032d747510SLisandro Dalcin   }
17042d747510SLisandro Dalcin   PetscFunctionReturn(0);
17052d747510SLisandro Dalcin }
17062d747510SLisandro Dalcin 
17072d747510SLisandro Dalcin /*@C
17082d747510SLisandro Dalcin    PetscOptionsLeftRestore - Free memory for the unused PETSc options obtained using PetscOptionsLeftGet.
17092d747510SLisandro Dalcin 
17102d747510SLisandro Dalcin    Not Collective
17112d747510SLisandro Dalcin 
17122d747510SLisandro Dalcin    Input Parameter:
1713a2b725a8SWilliam Gropp +  options - options database, use NULL for default global database
17142d747510SLisandro Dalcin .  names - names of options not used
1715a2b725a8SWilliam Gropp -  values - values of options not used
17162d747510SLisandro Dalcin 
17172d747510SLisandro Dalcin    Level: advanced
17182d747510SLisandro Dalcin 
17192d747510SLisandro Dalcin .seealso: PetscOptionsAllUsed(), PetscOptionsLeft(), PetscOptionsLeftGet()
17202d747510SLisandro Dalcin @*/
17212d747510SLisandro Dalcin PetscErrorCode PetscOptionsLeftRestore(PetscOptions options,PetscInt *N,char **names[],char **values[])
17222d747510SLisandro Dalcin {
17232d747510SLisandro Dalcin   PetscErrorCode ierr;
17242d747510SLisandro Dalcin 
17252d747510SLisandro Dalcin   PetscFunctionBegin;
17262d747510SLisandro Dalcin   if (N) PetscValidIntPointer(N,2);
17272d747510SLisandro Dalcin   if (names) PetscValidPointer(names,3);
17282d747510SLisandro Dalcin   if (values) PetscValidPointer(values,4);
17292d747510SLisandro Dalcin   if (N) { *N = 0; }
17302d747510SLisandro Dalcin   if (names)  { ierr = PetscFree(*names);CHKERRQ(ierr); }
17312d747510SLisandro Dalcin   if (values) { ierr = PetscFree(*values);CHKERRQ(ierr); }
17322d747510SLisandro Dalcin   PetscFunctionReturn(0);
17332d747510SLisandro Dalcin }
17342d747510SLisandro Dalcin 
17352d747510SLisandro Dalcin /*@C
17362d747510SLisandro Dalcin    PetscOptionsSetFromOptions - Sets options related to the handling of options in PETSc
17372d747510SLisandro Dalcin 
17382d747510SLisandro Dalcin    Collective on PETSC_COMM_WORLD
17392d747510SLisandro Dalcin 
17402d747510SLisandro Dalcin    Input Parameter:
17412d747510SLisandro Dalcin .  options - options database, use NULL for default global database
17422d747510SLisandro Dalcin 
17432d747510SLisandro Dalcin    Options Database Keys:
17442d747510SLisandro Dalcin +  -options_monitor <optional filename> - prints the names and values of all runtime options as they are set. The monitor functionality is not
17452d747510SLisandro Dalcin                 available for options set through a file, environment variable, or on
17462d747510SLisandro Dalcin                 the command line. Only options set after PetscInitialize() completes will
17472d747510SLisandro Dalcin                 be monitored.
1748a2b725a8SWilliam Gropp -  -options_monitor_cancel - cancel all options database monitors
17492d747510SLisandro Dalcin 
17502d747510SLisandro Dalcin    Notes:
17511c9f3c13SBarry Smith    To see all options, run your program with the -help option
17522d747510SLisandro Dalcin 
17532d747510SLisandro Dalcin    Level: intermediate
17542d747510SLisandro Dalcin 
17552d747510SLisandro Dalcin @*/
17562d747510SLisandro Dalcin PetscErrorCode PetscOptionsSetFromOptions(PetscOptions options)
17572d747510SLisandro Dalcin {
17582d747510SLisandro Dalcin   PetscBool      flgc = PETSC_FALSE,flgm;
17592d747510SLisandro Dalcin   PetscErrorCode ierr;
17602d747510SLisandro Dalcin   char           monfilename[PETSC_MAX_PATH_LEN];
17612d747510SLisandro Dalcin   PetscViewer    monviewer;
17622d747510SLisandro Dalcin 
17632d747510SLisandro Dalcin   PetscFunctionBegin;
17642d747510SLisandro Dalcin   /*
17652d747510SLisandro Dalcin      The options argument is currently ignored since we currently maintain only a single options database
17662d747510SLisandro Dalcin 
17672d747510SLisandro Dalcin      options = options ? options : defaultoptions;
17682d747510SLisandro Dalcin   */
17692d747510SLisandro Dalcin   ierr = PetscOptionsBegin(PETSC_COMM_WORLD,NULL,"Options for handling options","PetscOptions");CHKERRQ(ierr);
17702d747510SLisandro Dalcin   ierr = PetscOptionsString("-options_monitor","Monitor options database","PetscOptionsMonitorSet","stdout",monfilename,PETSC_MAX_PATH_LEN,&flgm);CHKERRQ(ierr);
17712d747510SLisandro Dalcin   ierr = PetscOptionsBool("-options_monitor_cancel","Cancel all options database monitors","PetscOptionsMonitorCancel",flgc,&flgc,NULL);CHKERRQ(ierr);
17722d747510SLisandro Dalcin   ierr = PetscOptionsEnd();CHKERRQ(ierr);
17732d747510SLisandro Dalcin   if (flgm) {
17742d747510SLisandro Dalcin     ierr = PetscViewerASCIIOpen(PETSC_COMM_WORLD,monfilename,&monviewer);CHKERRQ(ierr);
17752d747510SLisandro Dalcin     ierr = PetscOptionsMonitorSet(PetscOptionsMonitorDefault,monviewer,(PetscErrorCode (*)(void**))PetscViewerDestroy);CHKERRQ(ierr);
17762d747510SLisandro Dalcin   }
17772d747510SLisandro Dalcin   if (flgc) { ierr = PetscOptionsMonitorCancel();CHKERRQ(ierr); }
17782d747510SLisandro Dalcin   PetscFunctionReturn(0);
17792d747510SLisandro Dalcin }
17802d747510SLisandro Dalcin 
17812d747510SLisandro Dalcin /*@C
17822d747510SLisandro Dalcin    PetscOptionsMonitorDefault - Print all options set value events.
17832d747510SLisandro Dalcin 
17841c9f3c13SBarry Smith    Logically Collective on ctx
17852d747510SLisandro Dalcin 
17862d747510SLisandro Dalcin    Input Parameters:
17872d747510SLisandro Dalcin +  name  - option name string
17882d747510SLisandro Dalcin .  value - option value string
17892d747510SLisandro Dalcin -  ctx - an ASCII viewer
17902d747510SLisandro Dalcin 
17912d747510SLisandro Dalcin    Level: intermediate
17922d747510SLisandro Dalcin 
17939666a313SBarry Smith    Notes:
17949666a313SBarry Smith      The first MPI rank in the PetscViewer viewer actually prints the values, other
17951c9f3c13SBarry Smith      processes may have different values set
17961c9f3c13SBarry Smith 
17972d747510SLisandro Dalcin .seealso: PetscOptionsMonitorSet()
17982d747510SLisandro Dalcin @*/
17992d747510SLisandro Dalcin PetscErrorCode PetscOptionsMonitorDefault(const char name[],const char value[],void *ctx)
18002d747510SLisandro Dalcin {
18012d747510SLisandro Dalcin   PetscErrorCode ierr;
18022d747510SLisandro Dalcin   PetscViewer    viewer = (PetscViewer)ctx;
18032d747510SLisandro Dalcin 
18042d747510SLisandro Dalcin   PetscFunctionBegin;
18052d747510SLisandro Dalcin   if (!value) {
18062d747510SLisandro Dalcin     ierr = PetscViewerASCIIPrintf(viewer,"Removing option: %s\n",name,value);CHKERRQ(ierr);
18072d747510SLisandro Dalcin   } else if (!value[0]) {
18082d747510SLisandro Dalcin     ierr = PetscViewerASCIIPrintf(viewer,"Setting option: %s (no value)\n",name);CHKERRQ(ierr);
18092d747510SLisandro Dalcin   } else {
18102d747510SLisandro Dalcin     ierr = PetscViewerASCIIPrintf(viewer,"Setting option: %s = %s\n",name,value);CHKERRQ(ierr);
18112d747510SLisandro Dalcin   }
18122d747510SLisandro Dalcin   PetscFunctionReturn(0);
18132d747510SLisandro Dalcin }
18142d747510SLisandro Dalcin 
18152d747510SLisandro Dalcin /*@C
18162d747510SLisandro Dalcin    PetscOptionsMonitorSet - Sets an ADDITIONAL function to be called at every method that
18172d747510SLisandro Dalcin    modified the PETSc options database.
18182d747510SLisandro Dalcin 
18192d747510SLisandro Dalcin    Not Collective
18202d747510SLisandro Dalcin 
18212d747510SLisandro Dalcin    Input Parameters:
18222d747510SLisandro Dalcin +  monitor - pointer to function (if this is NULL, it turns off monitoring
18232d747510SLisandro Dalcin .  mctx    - [optional] context for private data for the
18242d747510SLisandro Dalcin              monitor routine (use NULL if no context is desired)
18252d747510SLisandro Dalcin -  monitordestroy - [optional] routine that frees monitor context
18262d747510SLisandro Dalcin           (may be NULL)
18272d747510SLisandro Dalcin 
18282d747510SLisandro Dalcin    Calling Sequence of monitor:
18292d747510SLisandro Dalcin $     monitor (const char name[], const char value[], void *mctx)
18302d747510SLisandro Dalcin 
18312d747510SLisandro Dalcin +  name - option name string
18322d747510SLisandro Dalcin .  value - option value string
18332d747510SLisandro Dalcin -  mctx  - optional monitoring context, as set by PetscOptionsMonitorSet()
18342d747510SLisandro Dalcin 
18352d747510SLisandro Dalcin    Options Database Keys:
18362d747510SLisandro Dalcin +    -options_monitor    - sets PetscOptionsMonitorDefault()
18372d747510SLisandro Dalcin -    -options_monitor_cancel - cancels all monitors that have
18382d747510SLisandro Dalcin                           been hardwired into a code by
18392d747510SLisandro Dalcin                           calls to PetscOptionsMonitorSet(), but
18402d747510SLisandro Dalcin                           does not cancel those set via
18412d747510SLisandro Dalcin                           the options database.
18422d747510SLisandro Dalcin 
18432d747510SLisandro Dalcin    Notes:
18442d747510SLisandro Dalcin    The default is to do nothing.  To print the name and value of options
18452d747510SLisandro Dalcin    being inserted into the database, use PetscOptionsMonitorDefault() as the monitoring routine,
18462d747510SLisandro Dalcin    with a null monitoring context.
18472d747510SLisandro Dalcin 
18482d747510SLisandro Dalcin    Several different monitoring routines may be set by calling
18492d747510SLisandro Dalcin    PetscOptionsMonitorSet() multiple times; all will be called in the
18502d747510SLisandro Dalcin    order in which they were set.
18512d747510SLisandro Dalcin 
18522d747510SLisandro Dalcin    Level: beginner
18532d747510SLisandro Dalcin 
18542d747510SLisandro Dalcin .seealso: PetscOptionsMonitorDefault(), PetscOptionsMonitorCancel()
18552d747510SLisandro Dalcin @*/
18562d747510SLisandro Dalcin PetscErrorCode PetscOptionsMonitorSet(PetscErrorCode (*monitor)(const char name[], const char value[], void*),void *mctx,PetscErrorCode (*monitordestroy)(void**))
18572d747510SLisandro Dalcin {
18582d747510SLisandro Dalcin   PetscOptions options = defaultoptions;
18592d747510SLisandro Dalcin 
18602d747510SLisandro Dalcin   PetscFunctionBegin;
18612d747510SLisandro Dalcin   if (options->numbermonitors >= MAXOPTIONSMONITORS) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Too many PetscOptions monitors set");
18622d747510SLisandro Dalcin   options->monitor[options->numbermonitors]          = monitor;
18632d747510SLisandro Dalcin   options->monitordestroy[options->numbermonitors]   = monitordestroy;
18642d747510SLisandro Dalcin   options->monitorcontext[options->numbermonitors++] = (void*)mctx;
18652d747510SLisandro Dalcin   PetscFunctionReturn(0);
18662d747510SLisandro Dalcin }
18672d747510SLisandro Dalcin 
18682d747510SLisandro Dalcin /*@
18692d747510SLisandro Dalcin    PetscOptionsMonitorCancel - Clears all monitors for a PetscOptions object.
18702d747510SLisandro Dalcin 
18712d747510SLisandro Dalcin    Not Collective
18722d747510SLisandro Dalcin 
18732d747510SLisandro Dalcin    Options Database Key:
18742d747510SLisandro Dalcin .  -options_monitor_cancel - Cancels all monitors that have
18752d747510SLisandro Dalcin     been hardwired into a code by calls to PetscOptionsMonitorSet(),
18762d747510SLisandro Dalcin     but does not cancel those set via the options database.
18772d747510SLisandro Dalcin 
18782d747510SLisandro Dalcin    Level: intermediate
18792d747510SLisandro Dalcin 
18802d747510SLisandro Dalcin .seealso: PetscOptionsMonitorDefault(), PetscOptionsMonitorSet()
18812d747510SLisandro Dalcin @*/
18822d747510SLisandro Dalcin PetscErrorCode PetscOptionsMonitorCancel(void)
18832d747510SLisandro Dalcin {
18842d747510SLisandro Dalcin   PetscErrorCode ierr;
18852d747510SLisandro Dalcin   PetscInt       i;
18862d747510SLisandro Dalcin   PetscOptions   options = defaultoptions;
18872d747510SLisandro Dalcin 
18882d747510SLisandro Dalcin   PetscFunctionBegin;
18892d747510SLisandro Dalcin   for (i=0; i<options->numbermonitors; i++) {
18902d747510SLisandro Dalcin     if (options->monitordestroy[i]) {
18912d747510SLisandro Dalcin       ierr = (*options->monitordestroy[i])(&options->monitorcontext[i]);CHKERRQ(ierr);
18922d747510SLisandro Dalcin     }
18932d747510SLisandro Dalcin   }
18942d747510SLisandro Dalcin   options->numbermonitors = 0;
18952d747510SLisandro Dalcin   PetscFunctionReturn(0);
18962d747510SLisandro Dalcin }
18972d747510SLisandro Dalcin 
18982d747510SLisandro Dalcin /*
18992d747510SLisandro Dalcin    PetscOptionsStringToBool - Converts string to PetscBool , handles cases like "yes", "no", "true", "false", "0", "1", "off", "on".
19002d747510SLisandro Dalcin */
19012d747510SLisandro Dalcin PetscErrorCode PetscOptionsStringToBool(const char value[],PetscBool *a)
19022d747510SLisandro Dalcin {
19032d747510SLisandro Dalcin   PetscBool      istrue,isfalse;
19042d747510SLisandro Dalcin   size_t         len;
19052d747510SLisandro Dalcin   PetscErrorCode ierr;
19062d747510SLisandro Dalcin 
19072d747510SLisandro Dalcin   PetscFunctionBegin;
19082d747510SLisandro Dalcin   ierr = PetscStrlen(value,&len);CHKERRQ(ierr);
19092d747510SLisandro Dalcin   if (!len) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Character string of length zero has no logical value");
19102d747510SLisandro Dalcin   ierr = PetscStrcasecmp(value,"TRUE",&istrue);CHKERRQ(ierr);
19112d747510SLisandro Dalcin   if (istrue) {*a = PETSC_TRUE; PetscFunctionReturn(0);}
19122d747510SLisandro Dalcin   ierr = PetscStrcasecmp(value,"YES",&istrue);CHKERRQ(ierr);
19132d747510SLisandro Dalcin   if (istrue) {*a = PETSC_TRUE; PetscFunctionReturn(0);}
19142d747510SLisandro Dalcin   ierr = PetscStrcasecmp(value,"1",&istrue);CHKERRQ(ierr);
19152d747510SLisandro Dalcin   if (istrue) {*a = PETSC_TRUE; PetscFunctionReturn(0);}
19162d747510SLisandro Dalcin   ierr = PetscStrcasecmp(value,"on",&istrue);CHKERRQ(ierr);
19172d747510SLisandro Dalcin   if (istrue) {*a = PETSC_TRUE; PetscFunctionReturn(0);}
19182d747510SLisandro Dalcin   ierr = PetscStrcasecmp(value,"FALSE",&isfalse);CHKERRQ(ierr);
19192d747510SLisandro Dalcin   if (isfalse) {*a = PETSC_FALSE; PetscFunctionReturn(0);}
19202d747510SLisandro Dalcin   ierr = PetscStrcasecmp(value,"NO",&isfalse);CHKERRQ(ierr);
19212d747510SLisandro Dalcin   if (isfalse) {*a = PETSC_FALSE; PetscFunctionReturn(0);}
19222d747510SLisandro Dalcin   ierr = PetscStrcasecmp(value,"0",&isfalse);CHKERRQ(ierr);
19232d747510SLisandro Dalcin   if (isfalse) {*a = PETSC_FALSE; PetscFunctionReturn(0);}
19242d747510SLisandro Dalcin   ierr = PetscStrcasecmp(value,"off",&isfalse);CHKERRQ(ierr);
19252d747510SLisandro Dalcin   if (isfalse) {*a = PETSC_FALSE; PetscFunctionReturn(0);}
19262d747510SLisandro Dalcin   SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Unknown logical value: %s",value);
19272d747510SLisandro Dalcin }
19282d747510SLisandro Dalcin 
19292d747510SLisandro Dalcin /*
19302d747510SLisandro Dalcin    PetscOptionsStringToInt - Converts a string to an integer value. Handles special cases such as "default" and "decide"
19312d747510SLisandro Dalcin */
19322d747510SLisandro Dalcin PetscErrorCode PetscOptionsStringToInt(const char name[],PetscInt *a)
19332d747510SLisandro Dalcin {
19342d747510SLisandro Dalcin   PetscErrorCode ierr;
19352d747510SLisandro Dalcin   size_t         len;
19362d747510SLisandro Dalcin   PetscBool      decide,tdefault,mouse;
19372d747510SLisandro Dalcin 
19382d747510SLisandro Dalcin   PetscFunctionBegin;
19392d747510SLisandro Dalcin   ierr = PetscStrlen(name,&len);CHKERRQ(ierr);
19402d747510SLisandro Dalcin   if (!len) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"character string of length zero has no numerical value");
19412d747510SLisandro Dalcin 
19422d747510SLisandro Dalcin   ierr = PetscStrcasecmp(name,"PETSC_DEFAULT",&tdefault);CHKERRQ(ierr);
19432d747510SLisandro Dalcin   if (!tdefault) {
19442d747510SLisandro Dalcin     ierr = PetscStrcasecmp(name,"DEFAULT",&tdefault);CHKERRQ(ierr);
19452d747510SLisandro Dalcin   }
19462d747510SLisandro Dalcin   ierr = PetscStrcasecmp(name,"PETSC_DECIDE",&decide);CHKERRQ(ierr);
19472d747510SLisandro Dalcin   if (!decide) {
19482d747510SLisandro Dalcin     ierr = PetscStrcasecmp(name,"DECIDE",&decide);CHKERRQ(ierr);
19492d747510SLisandro Dalcin   }
19502d747510SLisandro Dalcin   ierr = PetscStrcasecmp(name,"mouse",&mouse);CHKERRQ(ierr);
19512d747510SLisandro Dalcin 
19522d747510SLisandro Dalcin   if (tdefault)    *a = PETSC_DEFAULT;
19532d747510SLisandro Dalcin   else if (decide) *a = PETSC_DECIDE;
19542d747510SLisandro Dalcin   else if (mouse)  *a = -1;
19552d747510SLisandro Dalcin   else {
19562d747510SLisandro Dalcin     char *endptr;
19572d747510SLisandro Dalcin     long strtolval;
19582d747510SLisandro Dalcin 
19592d747510SLisandro Dalcin     strtolval = strtol(name,&endptr,10);
19602d747510SLisandro Dalcin     if ((size_t) (endptr - name) != len) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Input string %s has no integer value (do not include . in it)",name);
19612d747510SLisandro Dalcin 
19622d747510SLisandro Dalcin #if defined(PETSC_USE_64BIT_INDICES) && defined(PETSC_HAVE_ATOLL)
19632d747510SLisandro Dalcin     (void) strtolval;
19642d747510SLisandro Dalcin     *a = atoll(name);
19652d747510SLisandro Dalcin #elif defined(PETSC_USE_64BIT_INDICES) && defined(PETSC_HAVE___INT64)
19662d747510SLisandro Dalcin     (void) strtolval;
19672d747510SLisandro Dalcin     *a = _atoi64(name);
19682d747510SLisandro Dalcin #else
19692d747510SLisandro Dalcin     *a = (PetscInt)strtolval;
19702d747510SLisandro Dalcin #endif
19712d747510SLisandro Dalcin   }
19722d747510SLisandro Dalcin   PetscFunctionReturn(0);
19732d747510SLisandro Dalcin }
19742d747510SLisandro Dalcin 
19752d747510SLisandro Dalcin #if defined(PETSC_USE_REAL___FLOAT128)
19762d747510SLisandro Dalcin #include <quadmath.h>
19772d747510SLisandro Dalcin #endif
19782d747510SLisandro Dalcin 
19792d747510SLisandro Dalcin static PetscErrorCode PetscStrtod(const char name[],PetscReal *a,char **endptr)
19802d747510SLisandro Dalcin {
19812d747510SLisandro Dalcin   PetscFunctionBegin;
19822d747510SLisandro Dalcin #if defined(PETSC_USE_REAL___FLOAT128)
19832d747510SLisandro Dalcin   *a = strtoflt128(name,endptr);
19842d747510SLisandro Dalcin #else
19852d747510SLisandro Dalcin   *a = (PetscReal)strtod(name,endptr);
19862d747510SLisandro Dalcin #endif
19872d747510SLisandro Dalcin   PetscFunctionReturn(0);
19882d747510SLisandro Dalcin }
19892d747510SLisandro Dalcin 
19902d747510SLisandro Dalcin static PetscErrorCode PetscStrtoz(const char name[],PetscScalar *a,char **endptr,PetscBool *isImaginary)
19912d747510SLisandro Dalcin {
19922d747510SLisandro Dalcin   PetscBool      hasi = PETSC_FALSE;
19932d747510SLisandro Dalcin   char           *ptr;
19942d747510SLisandro Dalcin   PetscReal      strtoval;
19952d747510SLisandro Dalcin   PetscErrorCode ierr;
19962d747510SLisandro Dalcin 
19972d747510SLisandro Dalcin   PetscFunctionBegin;
19982d747510SLisandro Dalcin   ierr = PetscStrtod(name,&strtoval,&ptr);CHKERRQ(ierr);
19992d747510SLisandro Dalcin   if (ptr == name) {
20002d747510SLisandro Dalcin     strtoval = 1.;
20012d747510SLisandro Dalcin     hasi = PETSC_TRUE;
20022d747510SLisandro Dalcin     if (name[0] == 'i') {
20032d747510SLisandro Dalcin       ptr++;
20042d747510SLisandro Dalcin     } else if (name[0] == '+' && name[1] == 'i') {
20052d747510SLisandro Dalcin       ptr += 2;
20062d747510SLisandro Dalcin     } else if (name[0] == '-' && name[1] == 'i') {
20072d747510SLisandro Dalcin       strtoval = -1.;
20082d747510SLisandro Dalcin       ptr += 2;
20092d747510SLisandro Dalcin     }
20102d747510SLisandro Dalcin   } else if (*ptr == 'i') {
20112d747510SLisandro Dalcin     hasi = PETSC_TRUE;
20122d747510SLisandro Dalcin     ptr++;
20132d747510SLisandro Dalcin   }
20142d747510SLisandro Dalcin   *endptr = ptr;
20152d747510SLisandro Dalcin   *isImaginary = hasi;
20162d747510SLisandro Dalcin   if (hasi) {
20172d747510SLisandro Dalcin #if !defined(PETSC_USE_COMPLEX)
20182d747510SLisandro Dalcin     SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Input string %s contains imaginary but complex not supported ",name);
20192d747510SLisandro Dalcin #else
20202d747510SLisandro Dalcin     *a = PetscCMPLX(0.,strtoval);
20212d747510SLisandro Dalcin #endif
20222d747510SLisandro Dalcin   } else {
20232d747510SLisandro Dalcin     *a = strtoval;
20242d747510SLisandro Dalcin   }
20252d747510SLisandro Dalcin   PetscFunctionReturn(0);
20262d747510SLisandro Dalcin }
20272d747510SLisandro Dalcin 
20282d747510SLisandro Dalcin /*
20292d747510SLisandro Dalcin    Converts a string to PetscReal value. Handles special cases like "default" and "decide"
20302d747510SLisandro Dalcin */
20312d747510SLisandro Dalcin PetscErrorCode PetscOptionsStringToReal(const char name[],PetscReal *a)
20322d747510SLisandro Dalcin {
20332d747510SLisandro Dalcin   size_t         len;
20342d747510SLisandro Dalcin   PetscBool      match;
20352d747510SLisandro Dalcin   char           *endptr;
20362d747510SLisandro Dalcin   PetscErrorCode ierr;
20372d747510SLisandro Dalcin 
20382d747510SLisandro Dalcin   PetscFunctionBegin;
20392d747510SLisandro Dalcin   ierr = PetscStrlen(name,&len);CHKERRQ(ierr);
20402d747510SLisandro Dalcin   if (!len) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"String of length zero has no numerical value");
20412d747510SLisandro Dalcin 
20422d747510SLisandro Dalcin   ierr = PetscStrcasecmp(name,"PETSC_DEFAULT",&match);CHKERRQ(ierr);
20432d747510SLisandro Dalcin   if (!match) {
20442d747510SLisandro Dalcin     ierr = PetscStrcasecmp(name,"DEFAULT",&match);CHKERRQ(ierr);
20452d747510SLisandro Dalcin   }
20462d747510SLisandro Dalcin   if (match) {*a = PETSC_DEFAULT; PetscFunctionReturn(0);}
20472d747510SLisandro Dalcin 
20482d747510SLisandro Dalcin   ierr = PetscStrcasecmp(name,"PETSC_DECIDE",&match);CHKERRQ(ierr);
20492d747510SLisandro Dalcin   if (!match) {
20502d747510SLisandro Dalcin     ierr = PetscStrcasecmp(name,"DECIDE",&match);CHKERRQ(ierr);
20512d747510SLisandro Dalcin   }
20522d747510SLisandro Dalcin   if (match) {*a = PETSC_DECIDE; PetscFunctionReturn(0);}
20532d747510SLisandro Dalcin 
20542d747510SLisandro Dalcin   ierr = PetscStrtod(name,a,&endptr);CHKERRQ(ierr);
20552d747510SLisandro Dalcin   if ((size_t) (endptr - name) != len) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Input string %s has no numeric value",name);
20562d747510SLisandro Dalcin   PetscFunctionReturn(0);
20572d747510SLisandro Dalcin }
20582d747510SLisandro Dalcin 
20592d747510SLisandro Dalcin PetscErrorCode PetscOptionsStringToScalar(const char name[],PetscScalar *a)
20602d747510SLisandro Dalcin {
20612d747510SLisandro Dalcin   PetscBool      imag1;
20622d747510SLisandro Dalcin   size_t         len;
20632d747510SLisandro Dalcin   PetscScalar    val = 0.;
20642d747510SLisandro Dalcin   char           *ptr = NULL;
20652d747510SLisandro Dalcin   PetscErrorCode ierr;
20662d747510SLisandro Dalcin 
20672d747510SLisandro Dalcin   PetscFunctionBegin;
20682d747510SLisandro Dalcin   ierr = PetscStrlen(name,&len);CHKERRQ(ierr);
20692d747510SLisandro Dalcin   if (!len) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"character string of length zero has no numerical value");
20702d747510SLisandro Dalcin   ierr = PetscStrtoz(name,&val,&ptr,&imag1);CHKERRQ(ierr);
20712d747510SLisandro Dalcin #if defined(PETSC_USE_COMPLEX)
20722d747510SLisandro Dalcin   if ((size_t) (ptr - name) < len) {
20732d747510SLisandro Dalcin     PetscBool   imag2;
20742d747510SLisandro Dalcin     PetscScalar val2;
20752d747510SLisandro Dalcin 
20762d747510SLisandro Dalcin     ierr = PetscStrtoz(ptr,&val2,&ptr,&imag2);CHKERRQ(ierr);
20772d747510SLisandro Dalcin     if (imag1 || !imag2) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Input string %s: must specify imaginary component second",name);
20782d747510SLisandro Dalcin     val = PetscCMPLX(PetscRealPart(val),PetscImaginaryPart(val2));
20792d747510SLisandro Dalcin   }
20802d747510SLisandro Dalcin #endif
20812d747510SLisandro Dalcin   if ((size_t) (ptr - name) != len) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Input string %s has no numeric value ",name);
20822d747510SLisandro Dalcin   *a = val;
20832d747510SLisandro Dalcin   PetscFunctionReturn(0);
20842d747510SLisandro Dalcin }
20852d747510SLisandro Dalcin 
20862d747510SLisandro Dalcin /*@C
20872d747510SLisandro Dalcin    PetscOptionsGetBool - Gets the Logical (true or false) value for a particular
20882d747510SLisandro Dalcin             option in the database.
2089e5c89e4eSSatish Balay 
2090e5c89e4eSSatish Balay    Not Collective
2091e5c89e4eSSatish Balay 
2092e5c89e4eSSatish Balay    Input Parameters:
20935c9cc608SHong Zhang +  options - options database, use NULL for default global database
2094c5929fdfSBarry Smith .  pre - the string to prepend to the name or NULL
2095e5c89e4eSSatish Balay -  name - the option one is seeking
2096e5c89e4eSSatish Balay 
2097e5c89e4eSSatish Balay    Output Parameter:
20982d747510SLisandro Dalcin +  ivalue - the logical value to return
209996ef3cdfSSatish Balay -  set - PETSC_TRUE  if found, else PETSC_FALSE
2100e5c89e4eSSatish Balay 
2101e5c89e4eSSatish Balay    Level: beginner
2102e5c89e4eSSatish Balay 
210395452b02SPatrick Sanan    Notes:
21042d747510SLisandro Dalcin        TRUE, true, YES, yes, nostring, and 1 all translate to PETSC_TRUE
21052d747510SLisandro Dalcin        FALSE, false, NO, no, and 0 all translate to PETSC_FALSE
21062d747510SLisandro Dalcin 
21072d747510SLisandro Dalcin       If the option is given, but no value is provided, then ivalue and set are both given the value PETSC_TRUE. That is -requested_bool
21082d747510SLisandro Dalcin      is equivalent to -requested_bool true
21092d747510SLisandro Dalcin 
21102d747510SLisandro Dalcin        If the user does not supply the option at all ivalue is NOT changed. Thus
21112efd9cb1SBarry Smith      you should ALWAYS initialize the ivalue if you access it without first checking if the set flag is true.
21122efd9cb1SBarry Smith 
2113e5c89e4eSSatish Balay .seealso: PetscOptionsGetReal(), PetscOptionsHasName(), PetscOptionsGetString(),
21142d747510SLisandro Dalcin           PetscOptionsGetIntArray(), PetscOptionsGetRealArray(), PetscOptionsGetInt(), PetscOptionsBool(),
2115e5c89e4eSSatish Balay           PetscOptionsName(), PetscOptionsBegin(), PetscOptionsEnd(), PetscOptionsHead(),
2116e5c89e4eSSatish Balay           PetscOptionsStringArray(),PetscOptionsRealArray(), PetscOptionsScalar(),
2117acfcf0e5SJed Brown           PetscOptionsBoolGroupBegin(), PetscOptionsBoolGroup(), PetscOptionsBoolGroupEnd(),
2118a264d7a6SBarry Smith           PetscOptionsFList(), PetscOptionsEList()
2119e5c89e4eSSatish Balay @*/
21202d747510SLisandro Dalcin PetscErrorCode PetscOptionsGetBool(PetscOptions options,const char pre[],const char name[],PetscBool *ivalue,PetscBool *set)
2121e5c89e4eSSatish Balay {
21222d747510SLisandro Dalcin   const char     *value;
2123ace3abfcSBarry Smith   PetscBool      flag;
21242d747510SLisandro Dalcin   PetscErrorCode ierr;
2125e5c89e4eSSatish Balay 
2126e5c89e4eSSatish Balay   PetscFunctionBegin;
21272d747510SLisandro Dalcin   PetscValidCharPointer(name,3);
21282d747510SLisandro Dalcin   if (ivalue) PetscValidIntPointer(ivalue,4);
21292d747510SLisandro Dalcin   ierr = PetscOptionsFindPair(options,pre,name,&value,&flag);CHKERRQ(ierr);
2130e5c89e4eSSatish Balay   if (flag) {
213196ef3cdfSSatish Balay     if (set) *set = PETSC_TRUE;
21322d747510SLisandro Dalcin     if (!value) {
21332d747510SLisandro Dalcin       if (ivalue) *ivalue = PETSC_TRUE;
21342d747510SLisandro Dalcin     } else {
21352d747510SLisandro Dalcin       ierr = PetscOptionsStringToBool(value, &flag);CHKERRQ(ierr);
21362d747510SLisandro Dalcin       if (ivalue) *ivalue = flag;
2137e5c89e4eSSatish Balay     }
2138e5c89e4eSSatish Balay   } else {
213996ef3cdfSSatish Balay     if (set) *set = PETSC_FALSE;
2140e5c89e4eSSatish Balay   }
2141e5c89e4eSSatish Balay   PetscFunctionReturn(0);
2142e5c89e4eSSatish Balay }
2143e5c89e4eSSatish Balay 
2144e5c89e4eSSatish Balay /*@C
2145e5c89e4eSSatish Balay    PetscOptionsGetEList - Puts a list of option values that a single one may be selected from
2146e5c89e4eSSatish Balay 
2147e5c89e4eSSatish Balay    Not Collective
2148e5c89e4eSSatish Balay 
2149e5c89e4eSSatish Balay    Input Parameters:
21505c9cc608SHong Zhang +  options - options database, use NULL for default global database
2151c5929fdfSBarry Smith .  pre - the string to prepend to the name or NULL
2152e5c89e4eSSatish Balay .  opt - option name
2153a264d7a6SBarry Smith .  list - the possible choices (one of these must be selected, anything else is invalid)
2154a2b725a8SWilliam Gropp -  ntext - number of choices
2155e5c89e4eSSatish Balay 
2156e5c89e4eSSatish Balay    Output Parameter:
21572efd9cb1SBarry Smith +  value - the index of the value to return (defaults to zero if the option name is given but no choice is listed)
2158e5c89e4eSSatish Balay -  set - PETSC_TRUE if found, else PETSC_FALSE
2159e5c89e4eSSatish Balay 
2160e5c89e4eSSatish Balay    Level: intermediate
2161e5c89e4eSSatish Balay 
216295452b02SPatrick Sanan    Notes:
216395452b02SPatrick Sanan     If the user does not supply the option value is NOT changed. Thus
21642efd9cb1SBarry Smith      you should ALWAYS initialize the ivalue if you access it without first checking if the set flag is true.
21652efd9cb1SBarry Smith 
2166a264d7a6SBarry Smith    See PetscOptionsFList() for when the choices are given in a PetscFunctionList()
2167e5c89e4eSSatish Balay 
2168e5c89e4eSSatish Balay .seealso: PetscOptionsGetInt(), PetscOptionsGetReal(),
2169acfcf0e5SJed Brown           PetscOptionsHasName(), PetscOptionsGetIntArray(), PetscOptionsGetRealArray(), PetscOptionsBool(),
2170e5c89e4eSSatish Balay           PetscOptionsName(), PetscOptionsBegin(), PetscOptionsEnd(), PetscOptionsHead(),
2171e5c89e4eSSatish Balay           PetscOptionsStringArray(),PetscOptionsRealArray(), PetscOptionsScalar(),
2172acfcf0e5SJed Brown           PetscOptionsBoolGroupBegin(), PetscOptionsBoolGroup(), PetscOptionsBoolGroupEnd(),
2173a264d7a6SBarry Smith           PetscOptionsFList(), PetscOptionsEList()
2174e5c89e4eSSatish Balay @*/
2175c5929fdfSBarry Smith PetscErrorCode PetscOptionsGetEList(PetscOptions options,const char pre[],const char opt[],const char * const *list,PetscInt ntext,PetscInt *value,PetscBool *set)
2176e5c89e4eSSatish Balay {
2177e5c89e4eSSatish Balay   PetscErrorCode ierr;
217858b0ac4eSStefano Zampini   size_t         alen,len = 0, tlen = 0;
2179e5c89e4eSSatish Balay   char           *svalue;
2180ace3abfcSBarry Smith   PetscBool      aset,flg = PETSC_FALSE;
2181e5c89e4eSSatish Balay   PetscInt       i;
2182e5c89e4eSSatish Balay 
2183e5c89e4eSSatish Balay   PetscFunctionBegin;
21842d747510SLisandro Dalcin   PetscValidCharPointer(opt,3);
2185e5c89e4eSSatish Balay   for (i=0; i<ntext; i++) {
2186e5c89e4eSSatish Balay     ierr = PetscStrlen(list[i],&alen);CHKERRQ(ierr);
2187e5c89e4eSSatish Balay     if (alen > len) len = alen;
218858b0ac4eSStefano Zampini     tlen += len + 1;
2189e5c89e4eSSatish Balay   }
2190e5c89e4eSSatish Balay   len += 5; /* a little extra space for user mistypes */
2191785e854fSJed Brown   ierr = PetscMalloc1(len,&svalue);CHKERRQ(ierr);
2192c5929fdfSBarry Smith   ierr = PetscOptionsGetString(options,pre,opt,svalue,len,&aset);CHKERRQ(ierr);
2193e5c89e4eSSatish Balay   if (aset) {
2194fbedd5e0SJed Brown     ierr = PetscEListFind(ntext,list,svalue,value,&flg);CHKERRQ(ierr);
219558b0ac4eSStefano Zampini     if (!flg) {
219658b0ac4eSStefano Zampini       char *avail,*pavl;
219758b0ac4eSStefano Zampini 
219858b0ac4eSStefano Zampini       ierr = PetscMalloc1(tlen,&avail);CHKERRQ(ierr);
219958b0ac4eSStefano Zampini       pavl = avail;
220058b0ac4eSStefano Zampini       for (i=0; i<ntext; i++) {
220158b0ac4eSStefano Zampini         ierr = PetscStrlen(list[i],&alen);CHKERRQ(ierr);
220258b0ac4eSStefano Zampini         ierr = PetscStrcpy(pavl,list[i]);CHKERRQ(ierr);
220358b0ac4eSStefano Zampini         pavl += alen;
220458b0ac4eSStefano Zampini         ierr = PetscStrcpy(pavl," ");CHKERRQ(ierr);
220558b0ac4eSStefano Zampini         pavl += 1;
220658b0ac4eSStefano Zampini       }
220758b0ac4eSStefano Zampini       ierr = PetscStrtolower(avail);CHKERRQ(ierr);
220858b0ac4eSStefano Zampini       SETERRQ4(PETSC_COMM_SELF,PETSC_ERR_USER,"Unknown option %s for -%s%s. Available options: %s",svalue,pre ? pre : "",opt+1,avail);
220958b0ac4eSStefano Zampini     }
2210fbedd5e0SJed Brown     if (set) *set = PETSC_TRUE;
2211a297a907SKarl Rupp   } else if (set) *set = PETSC_FALSE;
2212e5c89e4eSSatish Balay   ierr = PetscFree(svalue);CHKERRQ(ierr);
2213e5c89e4eSSatish Balay   PetscFunctionReturn(0);
2214e5c89e4eSSatish Balay }
2215e5c89e4eSSatish Balay 
2216e5c89e4eSSatish Balay /*@C
2217e5c89e4eSSatish Balay    PetscOptionsGetEnum - Gets the enum value for a particular option in the database.
2218e5c89e4eSSatish Balay 
2219e5c89e4eSSatish Balay    Not Collective
2220e5c89e4eSSatish Balay 
2221e5c89e4eSSatish Balay    Input Parameters:
22225c9cc608SHong Zhang +  options - options database, use NULL for default global database
2223c5929fdfSBarry Smith .  pre - option prefix or NULL
2224e5c89e4eSSatish Balay .  opt - option name
2225e5c89e4eSSatish Balay .  list - array containing the list of choices, followed by the enum name, followed by the enum prefix, followed by a null
2226e5c89e4eSSatish Balay -  defaultv - the default (current) value
2227e5c89e4eSSatish Balay 
2228e5c89e4eSSatish Balay    Output Parameter:
2229e5c89e4eSSatish Balay +  value - the  value to return
223096ef3cdfSSatish Balay -  set - PETSC_TRUE if found, else PETSC_FALSE
2231e5c89e4eSSatish Balay 
2232e5c89e4eSSatish Balay    Level: beginner
2233e5c89e4eSSatish Balay 
223495452b02SPatrick Sanan    Notes:
223595452b02SPatrick Sanan     If the user does not supply the option value is NOT changed. Thus
22362efd9cb1SBarry Smith      you should ALWAYS initialize the ivalue if you access it without first checking if the set flag is true.
2237e5c89e4eSSatish Balay 
22382efd9cb1SBarry Smith           List is usually something like PCASMTypes or some other predefined list of enum names
2239e5c89e4eSSatish Balay 
2240e5c89e4eSSatish Balay .seealso: PetscOptionsGetReal(), PetscOptionsHasName(), PetscOptionsGetString(), PetscOptionsGetInt(),
2241acfcf0e5SJed Brown           PetscOptionsGetIntArray(), PetscOptionsGetRealArray(), PetscOptionsBool()
2242acfcf0e5SJed Brown           PetscOptionsInt(), PetscOptionsString(), PetscOptionsReal(), PetscOptionsBool(),
2243e5c89e4eSSatish Balay           PetscOptionsName(), PetscOptionsBegin(), PetscOptionsEnd(), PetscOptionsHead(),
2244e5c89e4eSSatish Balay           PetscOptionsStringArray(),PetscOptionsRealArray(), PetscOptionsScalar(),
2245acfcf0e5SJed Brown           PetscOptionsBoolGroupBegin(), PetscOptionsBoolGroup(), PetscOptionsBoolGroupEnd(),
2246a264d7a6SBarry Smith           PetscOptionsFList(), PetscOptionsEList(), PetscOptionsGetEList(), PetscOptionsEnum()
2247e5c89e4eSSatish Balay @*/
2248c5929fdfSBarry Smith PetscErrorCode PetscOptionsGetEnum(PetscOptions options,const char pre[],const char opt[],const char * const *list,PetscEnum *value,PetscBool *set)
2249e5c89e4eSSatish Balay {
2250e5c89e4eSSatish Balay   PetscErrorCode ierr;
225169a24498SJed Brown   PetscInt       ntext = 0,tval;
2252ace3abfcSBarry Smith   PetscBool      fset;
2253e5c89e4eSSatish Balay 
2254e5c89e4eSSatish Balay   PetscFunctionBegin;
22552d747510SLisandro Dalcin   PetscValidCharPointer(opt,3);
2256e5c89e4eSSatish Balay   while (list[ntext++]) {
2257e32f2f54SBarry Smith     if (ntext > 50) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"List argument appears to be wrong or have more than 50 entries");
2258e5c89e4eSSatish Balay   }
2259e32f2f54SBarry Smith   if (ntext < 3) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"List argument must have at least two entries: typename and type prefix");
2260e5c89e4eSSatish Balay   ntext -= 3;
2261c5929fdfSBarry Smith   ierr = PetscOptionsGetEList(options,pre,opt,list,ntext,&tval,&fset);CHKERRQ(ierr);
226269a24498SJed Brown   /* with PETSC_USE_64BIT_INDICES sizeof(PetscInt) != sizeof(PetscEnum) */
2263809ceb46SBarry Smith   if (fset) *value = (PetscEnum)tval;
2264809ceb46SBarry Smith   if (set) *set = fset;
2265e5c89e4eSSatish Balay   PetscFunctionReturn(0);
2266e5c89e4eSSatish Balay }
2267e5c89e4eSSatish Balay 
2268e5c89e4eSSatish Balay /*@C
22692d747510SLisandro Dalcin    PetscOptionsGetInt - Gets the integer value for a particular option in the database.
2270e5c89e4eSSatish Balay 
2271e5c89e4eSSatish Balay    Not Collective
2272e5c89e4eSSatish Balay 
2273e5c89e4eSSatish Balay    Input Parameters:
22745c9cc608SHong Zhang +  options - options database, use NULL for default global database
2275c5929fdfSBarry Smith .  pre - the string to prepend to the name or NULL
2276e5c89e4eSSatish Balay -  name - the option one is seeking
2277e5c89e4eSSatish Balay 
2278e5c89e4eSSatish Balay    Output Parameter:
22792d747510SLisandro Dalcin +  ivalue - the integer value to return
228096ef3cdfSSatish Balay -  set - PETSC_TRUE if found, else PETSC_FALSE
2281e5c89e4eSSatish Balay 
2282e5c89e4eSSatish Balay    Level: beginner
2283e5c89e4eSSatish Balay 
2284e5c89e4eSSatish Balay    Notes:
22852d747510SLisandro Dalcin    If the user does not supply the option ivalue is NOT changed. Thus
22862efd9cb1SBarry Smith    you should ALWAYS initialize the ivalue if you access it without first checking if the set flag is true.
22875c07ccb8SBarry Smith 
2288e5c89e4eSSatish Balay .seealso: PetscOptionsGetReal(), PetscOptionsHasName(), PetscOptionsGetString(),
22892d747510SLisandro Dalcin           PetscOptionsGetIntArray(), PetscOptionsGetRealArray(), PetscOptionsBool()
22902d747510SLisandro Dalcin           PetscOptionsInt(), PetscOptionsString(), PetscOptionsReal(), PetscOptionsBool(),
2291e5c89e4eSSatish Balay           PetscOptionsName(), PetscOptionsBegin(), PetscOptionsEnd(), PetscOptionsHead(),
2292e5c89e4eSSatish Balay           PetscOptionsStringArray(),PetscOptionsRealArray(), PetscOptionsScalar(),
2293acfcf0e5SJed Brown           PetscOptionsBoolGroupBegin(), PetscOptionsBoolGroup(), PetscOptionsBoolGroupEnd(),
2294a264d7a6SBarry Smith           PetscOptionsFList(), PetscOptionsEList()
2295e5c89e4eSSatish Balay @*/
22962d747510SLisandro Dalcin PetscErrorCode PetscOptionsGetInt(PetscOptions options,const char pre[],const char name[],PetscInt *ivalue,PetscBool *set)
2297e5c89e4eSSatish Balay {
22982d747510SLisandro Dalcin   const char     *value;
2299e5c89e4eSSatish Balay   PetscErrorCode ierr;
23002d747510SLisandro Dalcin   PetscBool      flag;
2301e5c89e4eSSatish Balay 
2302e5c89e4eSSatish Balay   PetscFunctionBegin;
23032d747510SLisandro Dalcin   PetscValidCharPointer(name,3);
23042d747510SLisandro Dalcin   PetscValidIntPointer(ivalue,4);
23052d747510SLisandro Dalcin   ierr = PetscOptionsFindPair(options,pre,name,&value,&flag);CHKERRQ(ierr);
2306e5c89e4eSSatish Balay   if (flag) {
230734a9cc2cSBarry Smith     if (!value) {
23082d747510SLisandro Dalcin       if (set) *set = PETSC_FALSE;
230934a9cc2cSBarry Smith     } else {
23102d747510SLisandro Dalcin       if (set) *set = PETSC_TRUE;
23112d747510SLisandro Dalcin       ierr = PetscOptionsStringToInt(value,ivalue);CHKERRQ(ierr);
2312e5c89e4eSSatish Balay     }
2313e5c89e4eSSatish Balay   } else {
231496ef3cdfSSatish Balay     if (set) *set = PETSC_FALSE;
2315e5c89e4eSSatish Balay   }
2316e5c89e4eSSatish Balay   PetscFunctionReturn(0);
2317e5c89e4eSSatish Balay }
2318e5c89e4eSSatish Balay 
2319e2446a98SMatthew Knepley /*@C
2320e5c89e4eSSatish Balay    PetscOptionsGetReal - Gets the double precision value for a particular
2321e5c89e4eSSatish Balay    option in the database.
2322e5c89e4eSSatish Balay 
2323e5c89e4eSSatish Balay    Not Collective
2324e5c89e4eSSatish Balay 
2325e5c89e4eSSatish Balay    Input Parameters:
23265c9cc608SHong Zhang +  options - options database, use NULL for default global database
2327c5929fdfSBarry Smith .  pre - string to prepend to each name or NULL
2328e5c89e4eSSatish Balay -  name - the option one is seeking
2329e5c89e4eSSatish Balay 
2330e5c89e4eSSatish Balay    Output Parameter:
2331e5c89e4eSSatish Balay +  dvalue - the double value to return
233296ef3cdfSSatish Balay -  set - PETSC_TRUE if found, PETSC_FALSE if not found
2333e5c89e4eSSatish Balay 
233495452b02SPatrick Sanan    Notes:
233595452b02SPatrick Sanan     If the user does not supply the option dvalue is NOT changed. Thus
23362efd9cb1SBarry Smith      you should ALWAYS initialize the ivalue if you access it without first checking if the set flag is true.
2337e4974155SBarry Smith 
2338e5c89e4eSSatish Balay    Level: beginner
2339e5c89e4eSSatish Balay 
2340e5c89e4eSSatish Balay .seealso: PetscOptionsGetInt(), PetscOptionsHasName(),
2341acfcf0e5SJed Brown           PetscOptionsGetString(), PetscOptionsGetIntArray(), PetscOptionsGetRealArray(),PetscOptionsBool(),
2342e5c89e4eSSatish Balay           PetscOptionsName(), PetscOptionsBegin(), PetscOptionsEnd(), PetscOptionsHead(),
2343e5c89e4eSSatish Balay           PetscOptionsStringArray(),PetscOptionsRealArray(), PetscOptionsScalar(),
2344acfcf0e5SJed Brown           PetscOptionsBoolGroupBegin(), PetscOptionsBoolGroup(), PetscOptionsBoolGroupEnd(),
2345a264d7a6SBarry Smith           PetscOptionsFList(), PetscOptionsEList()
2346e5c89e4eSSatish Balay @*/
2347c5929fdfSBarry Smith PetscErrorCode PetscOptionsGetReal(PetscOptions options,const char pre[],const char name[],PetscReal *dvalue,PetscBool *set)
2348e5c89e4eSSatish Balay {
23492d747510SLisandro Dalcin   const char     *value;
2350ace3abfcSBarry Smith   PetscBool      flag;
23512d747510SLisandro Dalcin   PetscErrorCode ierr;
2352e5c89e4eSSatish Balay 
2353e5c89e4eSSatish Balay   PetscFunctionBegin;
23542d747510SLisandro Dalcin   PetscValidCharPointer(name,3);
23552d747510SLisandro Dalcin   PetscValidRealPointer(dvalue,4);
23562d747510SLisandro Dalcin   ierr = PetscOptionsFindPair(options,pre,name,&value,&flag);CHKERRQ(ierr);
2357e5c89e4eSSatish Balay   if (flag) {
2358a297a907SKarl Rupp     if (!value) {
2359a297a907SKarl Rupp       if (set) *set = PETSC_FALSE;
2360a297a907SKarl Rupp     } else {
2361a297a907SKarl Rupp       if (set) *set = PETSC_TRUE;
2362a297a907SKarl Rupp       ierr = PetscOptionsStringToReal(value,dvalue);CHKERRQ(ierr);
2363a297a907SKarl Rupp     }
2364e5c89e4eSSatish Balay   } else {
236596ef3cdfSSatish Balay     if (set) *set = PETSC_FALSE;
2366e5c89e4eSSatish Balay   }
2367e5c89e4eSSatish Balay   PetscFunctionReturn(0);
2368e5c89e4eSSatish Balay }
2369e5c89e4eSSatish Balay 
2370e5c89e4eSSatish Balay /*@C
2371e5c89e4eSSatish Balay    PetscOptionsGetScalar - Gets the scalar value for a particular
2372e5c89e4eSSatish Balay    option in the database.
2373e5c89e4eSSatish Balay 
2374e5c89e4eSSatish Balay    Not Collective
2375e5c89e4eSSatish Balay 
2376e5c89e4eSSatish Balay    Input Parameters:
23775c9cc608SHong Zhang +  options - options database, use NULL for default global database
2378c5929fdfSBarry Smith .  pre - string to prepend to each name or NULL
2379e5c89e4eSSatish Balay -  name - the option one is seeking
2380e5c89e4eSSatish Balay 
2381e5c89e4eSSatish Balay    Output Parameter:
2382e5c89e4eSSatish Balay +  dvalue - the double value to return
238396ef3cdfSSatish Balay -  set - PETSC_TRUE if found, else PETSC_FALSE
2384e5c89e4eSSatish Balay 
2385e5c89e4eSSatish Balay    Level: beginner
2386e5c89e4eSSatish Balay 
2387e5c89e4eSSatish Balay    Usage:
2388eb4ae41dSBarry Smith    A complex number 2+3i must be specified with NO spaces
2389e5c89e4eSSatish Balay 
239095452b02SPatrick Sanan    Notes:
239195452b02SPatrick Sanan     If the user does not supply the option dvalue is NOT changed. Thus
23922efd9cb1SBarry Smith      you should ALWAYS initialize the ivalue if you access it without first checking if the set flag is true.
2393e4974155SBarry Smith 
2394e5c89e4eSSatish Balay .seealso: PetscOptionsGetInt(), PetscOptionsHasName(),
2395acfcf0e5SJed Brown           PetscOptionsGetString(), PetscOptionsGetIntArray(), PetscOptionsGetRealArray(), PetscOptionsBool(),
2396e5c89e4eSSatish Balay           PetscOptionsName(), PetscOptionsBegin(), PetscOptionsEnd(), PetscOptionsHead(),
2397e5c89e4eSSatish Balay           PetscOptionsStringArray(),PetscOptionsRealArray(), PetscOptionsScalar(),
2398acfcf0e5SJed Brown           PetscOptionsBoolGroupBegin(), PetscOptionsBoolGroup(), PetscOptionsBoolGroupEnd(),
2399a264d7a6SBarry Smith           PetscOptionsFList(), PetscOptionsEList()
2400e5c89e4eSSatish Balay @*/
2401c5929fdfSBarry Smith PetscErrorCode PetscOptionsGetScalar(PetscOptions options,const char pre[],const char name[],PetscScalar *dvalue,PetscBool *set)
2402e5c89e4eSSatish Balay {
24032d747510SLisandro Dalcin   const char     *value;
2404ace3abfcSBarry Smith   PetscBool      flag;
2405e5c89e4eSSatish Balay   PetscErrorCode ierr;
2406e5c89e4eSSatish Balay 
2407e5c89e4eSSatish Balay   PetscFunctionBegin;
24082d747510SLisandro Dalcin   PetscValidCharPointer(name,3);
24092d747510SLisandro Dalcin   PetscValidScalarPointer(dvalue,4);
24102d747510SLisandro Dalcin   ierr = PetscOptionsFindPair(options,pre,name,&value,&flag);CHKERRQ(ierr);
2411e5c89e4eSSatish Balay   if (flag) {
2412e5c89e4eSSatish Balay     if (!value) {
241396ef3cdfSSatish Balay       if (set) *set = PETSC_FALSE;
2414e5c89e4eSSatish Balay     } else {
2415e5c89e4eSSatish Balay #if !defined(PETSC_USE_COMPLEX)
2416cfbddea1SSatish Balay       ierr = PetscOptionsStringToReal(value,dvalue);CHKERRQ(ierr);
2417e5c89e4eSSatish Balay #else
2418eb4ae41dSBarry Smith       ierr = PetscOptionsStringToScalar(value,dvalue);CHKERRQ(ierr);
2419e5c89e4eSSatish Balay #endif
242096ef3cdfSSatish Balay       if (set) *set = PETSC_TRUE;
2421e5c89e4eSSatish Balay     }
2422e5c89e4eSSatish Balay   } else { /* flag */
242396ef3cdfSSatish Balay     if (set) *set = PETSC_FALSE;
2424e5c89e4eSSatish Balay   }
2425e5c89e4eSSatish Balay   PetscFunctionReturn(0);
2426e5c89e4eSSatish Balay }
2427e5c89e4eSSatish Balay 
2428e5c89e4eSSatish Balay /*@C
2429e5c89e4eSSatish Balay    PetscOptionsGetString - Gets the string value for a particular option in
2430e5c89e4eSSatish Balay    the database.
2431e5c89e4eSSatish Balay 
2432e5c89e4eSSatish Balay    Not Collective
2433e5c89e4eSSatish Balay 
2434e5c89e4eSSatish Balay    Input Parameters:
24355c9cc608SHong Zhang +  options - options database, use NULL for default global database
2436c5929fdfSBarry Smith .  pre - string to prepend to name or NULL
2437e5c89e4eSSatish Balay .  name - the option one is seeking
2438bcbf2dc5SJed Brown -  len - maximum length of the string including null termination
2439e5c89e4eSSatish Balay 
2440e5c89e4eSSatish Balay    Output Parameters:
2441e5c89e4eSSatish Balay +  string - location to copy string
244296ef3cdfSSatish Balay -  set - PETSC_TRUE if found, else PETSC_FALSE
2443e5c89e4eSSatish Balay 
2444e5c89e4eSSatish Balay    Level: beginner
2445e5c89e4eSSatish Balay 
2446e5c89e4eSSatish Balay    Fortran Note:
2447e5c89e4eSSatish Balay    The Fortran interface is slightly different from the C/C++
2448e5c89e4eSSatish Balay    interface (len is not used).  Sample usage in Fortran follows
2449e5c89e4eSSatish Balay .vb
2450e5c89e4eSSatish Balay       character *20    string
245193e6ba5cSBarry Smith       PetscErrorCode   ierr
245293e6ba5cSBarry Smith       PetscBool        set
24531b266c99SBarry Smith       call PetscOptionsGetString(PETSC_NULL_OPTIONS,PETSC_NULL_CHARACTER,'-s',string,set,ierr)
2454e5c89e4eSSatish Balay .ve
2455e5c89e4eSSatish Balay 
245695452b02SPatrick Sanan    Notes:
245795452b02SPatrick Sanan     if the option is given but no string is provided then an empty string is returned and set is given the value of PETSC_TRUE
2458e4974155SBarry Smith 
24592efd9cb1SBarry Smith            If the user does not use the option then the string is not changed. Thus
24602efd9cb1SBarry Smith            you should ALWAYS initialize the string if you access it without first checking if the set flag is true.
24612efd9cb1SBarry Smith 
2462f3dea69dSBarry Smith     Note:
2463f3dea69dSBarry Smith       Even if the user provided no string (for example -optionname -someotheroption) the flag is set to PETSC_TRUE (and the string is fulled with nulls).
2464f3dea69dSBarry Smith 
2465e5c89e4eSSatish Balay .seealso: PetscOptionsGetInt(), PetscOptionsGetReal(),
2466acfcf0e5SJed Brown           PetscOptionsHasName(), PetscOptionsGetIntArray(), PetscOptionsGetRealArray(), PetscOptionsBool(),
2467e5c89e4eSSatish Balay           PetscOptionsName(), PetscOptionsBegin(), PetscOptionsEnd(), PetscOptionsHead(),
2468e5c89e4eSSatish Balay           PetscOptionsStringArray(),PetscOptionsRealArray(), PetscOptionsScalar(),
2469acfcf0e5SJed Brown           PetscOptionsBoolGroupBegin(), PetscOptionsBoolGroup(), PetscOptionsBoolGroupEnd(),
2470a264d7a6SBarry Smith           PetscOptionsFList(), PetscOptionsEList()
2471e5c89e4eSSatish Balay @*/
2472c5929fdfSBarry Smith PetscErrorCode PetscOptionsGetString(PetscOptions options,const char pre[],const char name[],char string[],size_t len,PetscBool *set)
2473e5c89e4eSSatish Balay {
24742d747510SLisandro Dalcin   const char     *value;
2475ace3abfcSBarry Smith   PetscBool      flag;
24762d747510SLisandro Dalcin   PetscErrorCode ierr;
2477e5c89e4eSSatish Balay 
2478e5c89e4eSSatish Balay   PetscFunctionBegin;
24792d747510SLisandro Dalcin   PetscValidCharPointer(name,3);
24802d747510SLisandro Dalcin   PetscValidCharPointer(string,4);
24812d747510SLisandro Dalcin   ierr = PetscOptionsFindPair(options,pre,name,&value,&flag);CHKERRQ(ierr);
2482e5c89e4eSSatish Balay   if (!flag) {
248396ef3cdfSSatish Balay     if (set) *set = PETSC_FALSE;
2484e5c89e4eSSatish Balay   } else {
248596ef3cdfSSatish Balay     if (set) *set = PETSC_TRUE;
2486e5c89e4eSSatish Balay     if (value) {
2487e5c89e4eSSatish Balay       ierr = PetscStrncpy(string,value,len);CHKERRQ(ierr);
2488e5c89e4eSSatish Balay     } else {
2489580bdb30SBarry Smith       ierr = PetscArrayzero(string,len);CHKERRQ(ierr);
2490e5c89e4eSSatish Balay     }
2491e5c89e4eSSatish Balay   }
2492e5c89e4eSSatish Balay   PetscFunctionReturn(0);
2493e5c89e4eSSatish Balay }
2494e5c89e4eSSatish Balay 
2495c5929fdfSBarry Smith char *PetscOptionsGetStringMatlab(PetscOptions options,const char pre[],const char name[])
249614ce751eSBarry Smith {
24972d747510SLisandro Dalcin   const char     *value;
249814ce751eSBarry Smith   PetscBool      flag;
24992d747510SLisandro Dalcin   PetscErrorCode ierr;
250014ce751eSBarry Smith 
250114ce751eSBarry Smith   PetscFunctionBegin;
250202c9f0b5SLisandro Dalcin   ierr = PetscOptionsFindPair(options,pre,name,&value,&flag);if (ierr) PetscFunctionReturn(NULL);
25032d747510SLisandro Dalcin   if (flag) PetscFunctionReturn((char*)value);
250402c9f0b5SLisandro Dalcin   else PetscFunctionReturn(NULL);
250514ce751eSBarry Smith }
250614ce751eSBarry Smith 
25072d747510SLisandro Dalcin /*@C
25082d747510SLisandro Dalcin    PetscOptionsGetBoolArray - Gets an array of Logical (true or false) values for a particular
25092d747510SLisandro Dalcin    option in the database.  The values must be separated with commas with
25102d747510SLisandro Dalcin    no intervening spaces.
25112d747510SLisandro Dalcin 
25122d747510SLisandro Dalcin    Not Collective
25132d747510SLisandro Dalcin 
25142d747510SLisandro Dalcin    Input Parameters:
25152d747510SLisandro Dalcin +  options - options database, use NULL for default global database
25162d747510SLisandro Dalcin .  pre - string to prepend to each name or NULL
25172d747510SLisandro Dalcin .  name - the option one is seeking
25182d747510SLisandro Dalcin -  nmax - maximum number of values to retrieve
25192d747510SLisandro Dalcin 
25202d747510SLisandro Dalcin    Output Parameter:
25212d747510SLisandro Dalcin +  dvalue - the integer values to return
25222d747510SLisandro Dalcin .  nmax - actual number of values retreived
25232d747510SLisandro Dalcin -  set - PETSC_TRUE if found, else PETSC_FALSE
25242d747510SLisandro Dalcin 
25252d747510SLisandro Dalcin    Level: beginner
25262d747510SLisandro Dalcin 
25272d747510SLisandro Dalcin    Notes:
25282d747510SLisandro Dalcin        TRUE, true, YES, yes, nostring, and 1 all translate to PETSC_TRUE
25292d747510SLisandro Dalcin        FALSE, false, NO, no, and 0 all translate to PETSC_FALSE
25302d747510SLisandro Dalcin 
25312d747510SLisandro Dalcin .seealso: PetscOptionsGetInt(), PetscOptionsHasName(),
25322d747510SLisandro Dalcin           PetscOptionsGetString(), PetscOptionsGetRealArray(), PetscOptionsBool(),
25332d747510SLisandro Dalcin           PetscOptionsName(), PetscOptionsBegin(), PetscOptionsEnd(), PetscOptionsHead(),
25342d747510SLisandro Dalcin           PetscOptionsStringArray(),PetscOptionsRealArray(), PetscOptionsScalar(),
25352d747510SLisandro Dalcin           PetscOptionsBoolGroupBegin(), PetscOptionsBoolGroup(), PetscOptionsBoolGroupEnd(),
25362d747510SLisandro Dalcin           PetscOptionsFList(), PetscOptionsEList()
25372d747510SLisandro Dalcin @*/
25382d747510SLisandro Dalcin PetscErrorCode PetscOptionsGetBoolArray(PetscOptions options,const char pre[],const char name[],PetscBool dvalue[],PetscInt *nmax,PetscBool *set)
25392d747510SLisandro Dalcin {
25402d747510SLisandro Dalcin   const char     *svalue;
25412d747510SLisandro Dalcin   char           *value;
25422d747510SLisandro Dalcin   PetscErrorCode ierr;
25432d747510SLisandro Dalcin   PetscInt       n = 0;
25442d747510SLisandro Dalcin   PetscBool      flag;
25452d747510SLisandro Dalcin   PetscToken     token;
25462d747510SLisandro Dalcin 
25472d747510SLisandro Dalcin   PetscFunctionBegin;
25482d747510SLisandro Dalcin   PetscValidCharPointer(name,3);
25492d747510SLisandro Dalcin   PetscValidIntPointer(dvalue,4);
25502d747510SLisandro Dalcin   PetscValidIntPointer(nmax,5);
25512d747510SLisandro Dalcin 
25522d747510SLisandro Dalcin   ierr = PetscOptionsFindPair(options,pre,name,&svalue,&flag);CHKERRQ(ierr);
25532d747510SLisandro Dalcin   if (!flag || !svalue)  { if (set) *set = PETSC_FALSE; *nmax = 0; PetscFunctionReturn(0);}
25542d747510SLisandro Dalcin   if (set) *set = PETSC_TRUE;
25552d747510SLisandro Dalcin   ierr = PetscTokenCreate(svalue,',',&token);CHKERRQ(ierr);
25562d747510SLisandro Dalcin   ierr = PetscTokenFind(token,&value);CHKERRQ(ierr);
25572d747510SLisandro Dalcin   while (value && n < *nmax) {
25582d747510SLisandro Dalcin     ierr = PetscOptionsStringToBool(value,dvalue);CHKERRQ(ierr);
25592d747510SLisandro Dalcin     ierr = PetscTokenFind(token,&value);CHKERRQ(ierr);
25602d747510SLisandro Dalcin     dvalue++;
25612d747510SLisandro Dalcin     n++;
25622d747510SLisandro Dalcin   }
25632d747510SLisandro Dalcin   ierr  = PetscTokenDestroy(&token);CHKERRQ(ierr);
25642d747510SLisandro Dalcin   *nmax = n;
25652d747510SLisandro Dalcin   PetscFunctionReturn(0);
25662d747510SLisandro Dalcin }
25672d747510SLisandro Dalcin 
25682d747510SLisandro Dalcin /*@C
25692d747510SLisandro Dalcin    PetscOptionsGetEnumArray - Gets an array of enum values for a particular option in the database.
25702d747510SLisandro Dalcin 
25712d747510SLisandro Dalcin    Not Collective
25722d747510SLisandro Dalcin 
25732d747510SLisandro Dalcin    Input Parameters:
25742d747510SLisandro Dalcin +  options - options database, use NULL for default global database
25752d747510SLisandro Dalcin .  pre - option prefix or NULL
25762d747510SLisandro Dalcin .  name - option name
25772d747510SLisandro Dalcin .  list - array containing the list of choices, followed by the enum name, followed by the enum prefix, followed by a null
25782d747510SLisandro Dalcin -  nmax - maximum number of values to retrieve
25792d747510SLisandro Dalcin 
25802d747510SLisandro Dalcin    Output Parameters:
25812d747510SLisandro Dalcin +  ivalue - the  enum values to return
25822d747510SLisandro Dalcin .  nmax - actual number of values retreived
25832d747510SLisandro Dalcin -  set - PETSC_TRUE if found, else PETSC_FALSE
25842d747510SLisandro Dalcin 
25852d747510SLisandro Dalcin    Level: beginner
25862d747510SLisandro Dalcin 
25872d747510SLisandro Dalcin    Notes:
25882d747510SLisandro Dalcin    The array must be passed as a comma separated list.
25892d747510SLisandro Dalcin 
25902d747510SLisandro Dalcin    There must be no intervening spaces between the values.
25912d747510SLisandro Dalcin 
25922d747510SLisandro Dalcin    list is usually something like PCASMTypes or some other predefined list of enum names.
25932d747510SLisandro Dalcin 
25942d747510SLisandro Dalcin .seealso: PetscOptionsGetReal(), PetscOptionsHasName(), PetscOptionsGetString(), PetscOptionsGetInt(),
25952d747510SLisandro Dalcin           PetscOptionsGetEnum(), PetscOptionsGetIntArray(), PetscOptionsGetRealArray(), PetscOptionsBool()
25962d747510SLisandro Dalcin           PetscOptionsInt(), PetscOptionsString(), PetscOptionsReal(), PetscOptionsBool(), PetscOptionsName(),
25972d747510SLisandro Dalcin           PetscOptionsBegin(), PetscOptionsEnd(), PetscOptionsHead(), PetscOptionsStringArray(),PetscOptionsRealArray(),
25982d747510SLisandro Dalcin           PetscOptionsScalar(), PetscOptionsBoolGroupBegin(), PetscOptionsBoolGroup(), PetscOptionsBoolGroupEnd(),
25992d747510SLisandro Dalcin           PetscOptionsFList(), PetscOptionsEList(), PetscOptionsGetEList(), PetscOptionsEnum()
26002d747510SLisandro Dalcin @*/
26012d747510SLisandro Dalcin PetscErrorCode PetscOptionsGetEnumArray(PetscOptions options,const char pre[],const char name[],const char *const *list,PetscEnum ivalue[],PetscInt *nmax,PetscBool *set)
26022d747510SLisandro Dalcin {
26032d747510SLisandro Dalcin   const char     *svalue;
26042d747510SLisandro Dalcin   char           *value;
26052d747510SLisandro Dalcin   PetscInt       n = 0;
26062d747510SLisandro Dalcin   PetscEnum      evalue;
26072d747510SLisandro Dalcin   PetscBool      flag;
26082d747510SLisandro Dalcin   PetscToken     token;
26092d747510SLisandro Dalcin   PetscErrorCode ierr;
26102d747510SLisandro Dalcin 
26112d747510SLisandro Dalcin   PetscFunctionBegin;
26122d747510SLisandro Dalcin   PetscValidCharPointer(name,3);
26132d747510SLisandro Dalcin   PetscValidPointer(list,4);
26142d747510SLisandro Dalcin   PetscValidPointer(ivalue,5);
26152d747510SLisandro Dalcin   PetscValidIntPointer(nmax,6);
26162d747510SLisandro Dalcin 
26172d747510SLisandro Dalcin   ierr = PetscOptionsFindPair(options,pre,name,&svalue,&flag);CHKERRQ(ierr);
26182d747510SLisandro Dalcin   if (!flag || !svalue)  { if (set) *set = PETSC_FALSE; *nmax = 0; PetscFunctionReturn(0);}
26192d747510SLisandro Dalcin   if (set) *set = PETSC_TRUE;
26202d747510SLisandro Dalcin   ierr = PetscTokenCreate(svalue,',',&token);CHKERRQ(ierr);
26212d747510SLisandro Dalcin   ierr = PetscTokenFind(token,&value);CHKERRQ(ierr);
26222d747510SLisandro Dalcin   while (value && n < *nmax) {
26232d747510SLisandro Dalcin     ierr = PetscEnumFind(list,value,&evalue,&flag);CHKERRQ(ierr);
26242d747510SLisandro Dalcin     if (!flag) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_USER,"Unknown enum value '%s' for -%s%s",svalue,pre ? pre : "",name+1);
26252d747510SLisandro Dalcin     ivalue[n++] = evalue;
26262d747510SLisandro Dalcin     ierr = PetscTokenFind(token,&value);CHKERRQ(ierr);
26272d747510SLisandro Dalcin   }
26282d747510SLisandro Dalcin   ierr = PetscTokenDestroy(&token);CHKERRQ(ierr);
26292d747510SLisandro Dalcin   *nmax = n;
26302d747510SLisandro Dalcin   PetscFunctionReturn(0);
26312d747510SLisandro Dalcin }
26322d747510SLisandro Dalcin 
26332d747510SLisandro Dalcin /*@C
26342d747510SLisandro Dalcin    PetscOptionsGetIntArray - Gets an array of integer values for a particular
26352d747510SLisandro Dalcin    option in the database.
26362d747510SLisandro Dalcin 
26372d747510SLisandro Dalcin    Not Collective
26382d747510SLisandro Dalcin 
26392d747510SLisandro Dalcin    Input Parameters:
26402d747510SLisandro Dalcin +  options - options database, use NULL for default global database
26412d747510SLisandro Dalcin .  pre - string to prepend to each name or NULL
26422d747510SLisandro Dalcin .  name - the option one is seeking
26432d747510SLisandro Dalcin -  nmax - maximum number of values to retrieve
26442d747510SLisandro Dalcin 
26452d747510SLisandro Dalcin    Output Parameter:
26462d747510SLisandro Dalcin +  ivalue - the integer values to return
26472d747510SLisandro Dalcin .  nmax - actual number of values retreived
26482d747510SLisandro Dalcin -  set - PETSC_TRUE if found, else PETSC_FALSE
26492d747510SLisandro Dalcin 
26502d747510SLisandro Dalcin    Level: beginner
26512d747510SLisandro Dalcin 
26522d747510SLisandro Dalcin    Notes:
26532d747510SLisandro Dalcin    The array can be passed as
26542d747510SLisandro Dalcin    a comma separated list:                                 0,1,2,3,4,5,6,7
26552d747510SLisandro Dalcin    a range (start-end+1):                                  0-8
26562d747510SLisandro Dalcin    a range with given increment (start-end+1:inc):         0-7:2
26572d747510SLisandro Dalcin    a combination of values and ranges separated by commas: 0,1-8,8-15:2
26582d747510SLisandro Dalcin 
26592d747510SLisandro Dalcin    There must be no intervening spaces between the values.
26602d747510SLisandro Dalcin 
26612d747510SLisandro Dalcin .seealso: PetscOptionsGetInt(), PetscOptionsHasName(),
26622d747510SLisandro Dalcin           PetscOptionsGetString(), PetscOptionsGetRealArray(), PetscOptionsBool(),
26632d747510SLisandro Dalcin           PetscOptionsName(), PetscOptionsBegin(), PetscOptionsEnd(), PetscOptionsHead(),
26642d747510SLisandro Dalcin           PetscOptionsStringArray(),PetscOptionsRealArray(), PetscOptionsScalar(),
26652d747510SLisandro Dalcin           PetscOptionsBoolGroupBegin(), PetscOptionsBoolGroup(), PetscOptionsBoolGroupEnd(),
26662d747510SLisandro Dalcin           PetscOptionsFList(), PetscOptionsEList()
26672d747510SLisandro Dalcin @*/
26682d747510SLisandro Dalcin PetscErrorCode PetscOptionsGetIntArray(PetscOptions options,const char pre[],const char name[],PetscInt ivalue[],PetscInt *nmax,PetscBool *set)
26692d747510SLisandro Dalcin {
26702d747510SLisandro Dalcin   const char     *svalue;
26712d747510SLisandro Dalcin   char           *value;
26722d747510SLisandro Dalcin   PetscErrorCode ierr;
26732d747510SLisandro Dalcin   PetscInt       n = 0,i,j,start,end,inc,nvalues;
26742d747510SLisandro Dalcin   size_t         len;
26752d747510SLisandro Dalcin   PetscBool      flag,foundrange;
26762d747510SLisandro Dalcin   PetscToken     token;
26772d747510SLisandro Dalcin 
26782d747510SLisandro Dalcin   PetscFunctionBegin;
26792d747510SLisandro Dalcin   PetscValidCharPointer(name,3);
26802d747510SLisandro Dalcin   PetscValidIntPointer(ivalue,4);
26812d747510SLisandro Dalcin   PetscValidIntPointer(nmax,5);
26822d747510SLisandro Dalcin 
26832d747510SLisandro Dalcin   ierr = PetscOptionsFindPair(options,pre,name,&svalue,&flag);CHKERRQ(ierr);
26842d747510SLisandro Dalcin   if (!flag || !svalue)  { if (set) *set = PETSC_FALSE; *nmax = 0; PetscFunctionReturn(0);}
26852d747510SLisandro Dalcin   if (set) *set = PETSC_TRUE;
26862d747510SLisandro Dalcin   ierr = PetscTokenCreate(svalue,',',&token);CHKERRQ(ierr);
26872d747510SLisandro Dalcin   ierr = PetscTokenFind(token,&value);CHKERRQ(ierr);
26882d747510SLisandro Dalcin   while (value && n < *nmax) {
26892d747510SLisandro Dalcin     /* look for form  d-D where d and D are integers */
26902d747510SLisandro Dalcin     foundrange = PETSC_FALSE;
26912d747510SLisandro Dalcin     ierr       = PetscStrlen(value,&len);CHKERRQ(ierr);
26922d747510SLisandro Dalcin     if (value[0] == '-') i=2;
26932d747510SLisandro Dalcin     else i=1;
26942d747510SLisandro Dalcin     for (;i<(int)len; i++) {
26952d747510SLisandro Dalcin       if (value[i] == '-') {
26962d747510SLisandro Dalcin         if (i == (int)len-1) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"Error in %D-th array entry %s\n",n,value);
26972d747510SLisandro Dalcin         value[i] = 0;
26982d747510SLisandro Dalcin 
26992d747510SLisandro Dalcin         ierr = PetscOptionsStringToInt(value,&start);CHKERRQ(ierr);
27002d747510SLisandro Dalcin         inc  = 1;
27012d747510SLisandro Dalcin         j    = i+1;
27022d747510SLisandro Dalcin         for (;j<(int)len; j++) {
27032d747510SLisandro Dalcin           if (value[j] == ':') {
27042d747510SLisandro Dalcin             value[j] = 0;
27052d747510SLisandro Dalcin 
27062d747510SLisandro Dalcin             ierr = PetscOptionsStringToInt(value+j+1,&inc);CHKERRQ(ierr);
27072d747510SLisandro Dalcin             if (inc <= 0) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"Error in %D-th array entry,%s cannot have negative increment",n,value+j+1);
27082d747510SLisandro Dalcin             break;
27092d747510SLisandro Dalcin           }
27102d747510SLisandro Dalcin         }
27112d747510SLisandro Dalcin         ierr = PetscOptionsStringToInt(value+i+1,&end);CHKERRQ(ierr);
27122d747510SLisandro Dalcin         if (end <= start) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_USER,"Error in %D-th array entry, %s-%s cannot have decreasing list",n,value,value+i+1);
27132d747510SLisandro Dalcin         nvalues = (end-start)/inc + (end-start)%inc;
27142d747510SLisandro Dalcin         if (n + nvalues  > *nmax) SETERRQ4(PETSC_COMM_SELF,PETSC_ERR_USER,"Error in %D-th array entry, not enough space left in array (%D) to contain entire range from %D to %D",n,*nmax-n,start,end);
27152d747510SLisandro Dalcin         for (;start<end; start+=inc) {
27162d747510SLisandro Dalcin           *ivalue = start; ivalue++;n++;
27172d747510SLisandro Dalcin         }
27182d747510SLisandro Dalcin         foundrange = PETSC_TRUE;
27192d747510SLisandro Dalcin         break;
27202d747510SLisandro Dalcin       }
27212d747510SLisandro Dalcin     }
27222d747510SLisandro Dalcin     if (!foundrange) {
27232d747510SLisandro Dalcin       ierr = PetscOptionsStringToInt(value,ivalue);CHKERRQ(ierr);
27242d747510SLisandro Dalcin       ivalue++;
27252d747510SLisandro Dalcin       n++;
27262d747510SLisandro Dalcin     }
27272d747510SLisandro Dalcin     ierr = PetscTokenFind(token,&value);CHKERRQ(ierr);
27282d747510SLisandro Dalcin   }
27292d747510SLisandro Dalcin   ierr  = PetscTokenDestroy(&token);CHKERRQ(ierr);
27302d747510SLisandro Dalcin   *nmax = n;
27312d747510SLisandro Dalcin   PetscFunctionReturn(0);
27322d747510SLisandro Dalcin }
27332d747510SLisandro Dalcin 
27342d747510SLisandro Dalcin /*@C
27352d747510SLisandro Dalcin    PetscOptionsGetRealArray - Gets an array of double precision values for a
27362d747510SLisandro Dalcin    particular option in the database.  The values must be separated with
27372d747510SLisandro Dalcin    commas with no intervening spaces.
27382d747510SLisandro Dalcin 
27392d747510SLisandro Dalcin    Not Collective
27402d747510SLisandro Dalcin 
27412d747510SLisandro Dalcin    Input Parameters:
27422d747510SLisandro Dalcin +  options - options database, use NULL for default global database
27432d747510SLisandro Dalcin .  pre - string to prepend to each name or NULL
27442d747510SLisandro Dalcin .  name - the option one is seeking
27452d747510SLisandro Dalcin -  nmax - maximum number of values to retrieve
27462d747510SLisandro Dalcin 
27472d747510SLisandro Dalcin    Output Parameters:
27482d747510SLisandro Dalcin +  dvalue - the double values to return
27492d747510SLisandro Dalcin .  nmax - actual number of values retreived
27502d747510SLisandro Dalcin -  set - PETSC_TRUE if found, else PETSC_FALSE
27512d747510SLisandro Dalcin 
27522d747510SLisandro Dalcin    Level: beginner
27532d747510SLisandro Dalcin 
27542d747510SLisandro Dalcin .seealso: PetscOptionsGetInt(), PetscOptionsHasName(),
27552d747510SLisandro Dalcin           PetscOptionsGetString(), PetscOptionsGetIntArray(), PetscOptionsBool(),
27562d747510SLisandro Dalcin           PetscOptionsName(), PetscOptionsBegin(), PetscOptionsEnd(), PetscOptionsHead(),
27572d747510SLisandro Dalcin           PetscOptionsStringArray(),PetscOptionsRealArray(), PetscOptionsScalar(),
27582d747510SLisandro Dalcin           PetscOptionsBoolGroupBegin(), PetscOptionsBoolGroup(), PetscOptionsBoolGroupEnd(),
27592d747510SLisandro Dalcin           PetscOptionsFList(), PetscOptionsEList()
27602d747510SLisandro Dalcin @*/
27612d747510SLisandro Dalcin PetscErrorCode PetscOptionsGetRealArray(PetscOptions options,const char pre[],const char name[],PetscReal dvalue[],PetscInt *nmax,PetscBool *set)
27622d747510SLisandro Dalcin {
27632d747510SLisandro Dalcin   const char     *svalue;
27642d747510SLisandro Dalcin   char           *value;
27652d747510SLisandro Dalcin   PetscErrorCode ierr;
27662d747510SLisandro Dalcin   PetscInt       n = 0;
27672d747510SLisandro Dalcin   PetscBool      flag;
27682d747510SLisandro Dalcin   PetscToken     token;
27692d747510SLisandro Dalcin 
27702d747510SLisandro Dalcin   PetscFunctionBegin;
27712d747510SLisandro Dalcin   PetscValidCharPointer(name,3);
27722d747510SLisandro Dalcin   PetscValidRealPointer(dvalue,4);
27732d747510SLisandro Dalcin   PetscValidIntPointer(nmax,5);
27742d747510SLisandro Dalcin 
27752d747510SLisandro Dalcin   ierr = PetscOptionsFindPair(options,pre,name,&svalue,&flag);CHKERRQ(ierr);
27762d747510SLisandro Dalcin   if (!flag || !svalue)  { if (set) *set = PETSC_FALSE; *nmax = 0; PetscFunctionReturn(0);}
27772d747510SLisandro Dalcin   if (set) *set = PETSC_TRUE;
27782d747510SLisandro Dalcin   ierr = PetscTokenCreate(svalue,',',&token);CHKERRQ(ierr);
27792d747510SLisandro Dalcin   ierr = PetscTokenFind(token,&value);CHKERRQ(ierr);
27802d747510SLisandro Dalcin   while (value && n < *nmax) {
27812d747510SLisandro Dalcin     ierr = PetscOptionsStringToReal(value,dvalue++);CHKERRQ(ierr);
27822d747510SLisandro Dalcin     ierr = PetscTokenFind(token,&value);CHKERRQ(ierr);
27832d747510SLisandro Dalcin     n++;
27842d747510SLisandro Dalcin   }
27852d747510SLisandro Dalcin   ierr  = PetscTokenDestroy(&token);CHKERRQ(ierr);
27862d747510SLisandro Dalcin   *nmax = n;
27872d747510SLisandro Dalcin   PetscFunctionReturn(0);
27882d747510SLisandro Dalcin }
27892d747510SLisandro Dalcin 
27902d747510SLisandro Dalcin /*@C
27912d747510SLisandro Dalcin    PetscOptionsGetScalarArray - Gets an array of scalars for a
27922d747510SLisandro Dalcin    particular option in the database.  The values must be separated with
27932d747510SLisandro Dalcin    commas with no intervening spaces.
27942d747510SLisandro Dalcin 
27952d747510SLisandro Dalcin    Not Collective
27962d747510SLisandro Dalcin 
27972d747510SLisandro Dalcin    Input Parameters:
27982d747510SLisandro Dalcin +  options - options database, use NULL for default global database
27992d747510SLisandro Dalcin .  pre - string to prepend to each name or NULL
28002d747510SLisandro Dalcin .  name - the option one is seeking
28012d747510SLisandro Dalcin -  nmax - maximum number of values to retrieve
28022d747510SLisandro Dalcin 
28032d747510SLisandro Dalcin    Output Parameters:
28042d747510SLisandro Dalcin +  dvalue - the scalar values to return
28052d747510SLisandro Dalcin .  nmax - actual number of values retreived
28062d747510SLisandro Dalcin -  set - PETSC_TRUE if found, else PETSC_FALSE
28072d747510SLisandro Dalcin 
28082d747510SLisandro Dalcin    Level: beginner
28092d747510SLisandro Dalcin 
28102d747510SLisandro Dalcin .seealso: PetscOptionsGetInt(), PetscOptionsHasName(),
28112d747510SLisandro Dalcin           PetscOptionsGetString(), PetscOptionsGetIntArray(), PetscOptionsBool(),
28122d747510SLisandro Dalcin           PetscOptionsName(), PetscOptionsBegin(), PetscOptionsEnd(), PetscOptionsHead(),
28132d747510SLisandro Dalcin           PetscOptionsStringArray(),PetscOptionsRealArray(), PetscOptionsScalar(),
28142d747510SLisandro Dalcin           PetscOptionsBoolGroupBegin(), PetscOptionsBoolGroup(), PetscOptionsBoolGroupEnd(),
28152d747510SLisandro Dalcin           PetscOptionsFList(), PetscOptionsEList()
28162d747510SLisandro Dalcin @*/
28172d747510SLisandro Dalcin PetscErrorCode PetscOptionsGetScalarArray(PetscOptions options,const char pre[],const char name[],PetscScalar dvalue[],PetscInt *nmax,PetscBool *set)
28182d747510SLisandro Dalcin {
28192d747510SLisandro Dalcin   const char     *svalue;
28202d747510SLisandro Dalcin   char           *value;
28212d747510SLisandro Dalcin   PetscErrorCode ierr;
28222d747510SLisandro Dalcin   PetscInt       n = 0;
28232d747510SLisandro Dalcin   PetscBool      flag;
28242d747510SLisandro Dalcin   PetscToken     token;
28252d747510SLisandro Dalcin 
28262d747510SLisandro Dalcin   PetscFunctionBegin;
28272d747510SLisandro Dalcin   PetscValidCharPointer(name,3);
28282d747510SLisandro Dalcin   PetscValidRealPointer(dvalue,4);
28292d747510SLisandro Dalcin   PetscValidIntPointer(nmax,5);
28302d747510SLisandro Dalcin 
28312d747510SLisandro Dalcin   ierr = PetscOptionsFindPair(options,pre,name,&svalue,&flag);CHKERRQ(ierr);
28322d747510SLisandro Dalcin   if (!flag || !svalue)  { if (set) *set = PETSC_FALSE; *nmax = 0; PetscFunctionReturn(0);}
28332d747510SLisandro Dalcin   if (set) *set = PETSC_TRUE;
28342d747510SLisandro Dalcin   ierr = PetscTokenCreate(svalue,',',&token);CHKERRQ(ierr);
28352d747510SLisandro Dalcin   ierr = PetscTokenFind(token,&value);CHKERRQ(ierr);
28362d747510SLisandro Dalcin   while (value && n < *nmax) {
28372d747510SLisandro Dalcin     ierr = PetscOptionsStringToScalar(value,dvalue++);CHKERRQ(ierr);
28382d747510SLisandro Dalcin     ierr = PetscTokenFind(token,&value);CHKERRQ(ierr);
28392d747510SLisandro Dalcin     n++;
28402d747510SLisandro Dalcin   }
28412d747510SLisandro Dalcin   ierr  = PetscTokenDestroy(&token);CHKERRQ(ierr);
28422d747510SLisandro Dalcin   *nmax = n;
28432d747510SLisandro Dalcin   PetscFunctionReturn(0);
28442d747510SLisandro Dalcin }
284514ce751eSBarry Smith 
2846e5c89e4eSSatish Balay /*@C
2847e5c89e4eSSatish Balay    PetscOptionsGetStringArray - Gets an array of string values for a particular
2848e5c89e4eSSatish Balay    option in the database. The values must be separated with commas with
2849e5c89e4eSSatish Balay    no intervening spaces.
2850e5c89e4eSSatish Balay 
2851e5c89e4eSSatish Balay    Not Collective
2852e5c89e4eSSatish Balay 
2853e5c89e4eSSatish Balay    Input Parameters:
28545c9cc608SHong Zhang +  options - options database, use NULL for default global database
2855c5929fdfSBarry Smith .  pre - string to prepend to name or NULL
2856e5c89e4eSSatish Balay .  name - the option one is seeking
2857e5c89e4eSSatish Balay -  nmax - maximum number of strings
2858e5c89e4eSSatish Balay 
2859e5c89e4eSSatish Balay    Output Parameter:
2860e5c89e4eSSatish Balay +  strings - location to copy strings
286196ef3cdfSSatish Balay -  set - PETSC_TRUE if found, else PETSC_FALSE
2862e5c89e4eSSatish Balay 
2863e5c89e4eSSatish Balay    Level: beginner
2864e5c89e4eSSatish Balay 
2865e5c89e4eSSatish Balay    Notes:
2866e5c89e4eSSatish Balay    The user should pass in an array of pointers to char, to hold all the
2867e5c89e4eSSatish Balay    strings returned by this function.
2868e5c89e4eSSatish Balay 
2869e5c89e4eSSatish Balay    The user is responsible for deallocating the strings that are
2870e5c89e4eSSatish Balay    returned. The Fortran interface for this routine is not supported.
2871e5c89e4eSSatish Balay 
2872e5c89e4eSSatish Balay .seealso: PetscOptionsGetInt(), PetscOptionsGetReal(),
2873acfcf0e5SJed Brown           PetscOptionsHasName(), PetscOptionsGetIntArray(), PetscOptionsGetRealArray(), PetscOptionsBool(),
2874e5c89e4eSSatish Balay           PetscOptionsName(), PetscOptionsBegin(), PetscOptionsEnd(), PetscOptionsHead(),
2875e5c89e4eSSatish Balay           PetscOptionsStringArray(),PetscOptionsRealArray(), PetscOptionsScalar(),
2876acfcf0e5SJed Brown           PetscOptionsBoolGroupBegin(), PetscOptionsBoolGroup(), PetscOptionsBoolGroupEnd(),
2877a264d7a6SBarry Smith           PetscOptionsFList(), PetscOptionsEList()
2878e5c89e4eSSatish Balay @*/
2879c5929fdfSBarry Smith PetscErrorCode PetscOptionsGetStringArray(PetscOptions options,const char pre[],const char name[],char *strings[],PetscInt *nmax,PetscBool *set)
2880e5c89e4eSSatish Balay {
28812d747510SLisandro Dalcin   const char     *svalue;
2882e5c89e4eSSatish Balay   char           *value;
2883e5c89e4eSSatish Balay   PetscErrorCode ierr;
28842d747510SLisandro Dalcin   PetscInt       n = 0;
2885ace3abfcSBarry Smith   PetscBool      flag;
28869c9d3cfdSBarry Smith   PetscToken     token;
2887e5c89e4eSSatish Balay 
2888e5c89e4eSSatish Balay   PetscFunctionBegin;
28892d747510SLisandro Dalcin   PetscValidCharPointer(name,3);
28902d747510SLisandro Dalcin   PetscValidPointer(strings,4);
28912d747510SLisandro Dalcin   PetscValidIntPointer(nmax,5);
2892e5c89e4eSSatish Balay 
28932d747510SLisandro Dalcin   ierr = PetscOptionsFindPair(options,pre,name,&svalue,&flag);CHKERRQ(ierr);
28942d747510SLisandro Dalcin   if (!flag || !svalue)  { if (set) *set = PETSC_FALSE; *nmax = 0; PetscFunctionReturn(0);}
28952d747510SLisandro Dalcin   if (set) *set = PETSC_TRUE;
28962d747510SLisandro Dalcin   ierr = PetscTokenCreate(svalue,',',&token);CHKERRQ(ierr);
2897e5c89e4eSSatish Balay   ierr = PetscTokenFind(token,&value);CHKERRQ(ierr);
28982d747510SLisandro Dalcin   while (value && n < *nmax) {
2899e5c89e4eSSatish Balay     ierr = PetscStrallocpy(value,&strings[n]);CHKERRQ(ierr);
2900e5c89e4eSSatish Balay     ierr = PetscTokenFind(token,&value);CHKERRQ(ierr);
2901e5c89e4eSSatish Balay     n++;
2902e5c89e4eSSatish Balay   }
29038c74ee41SBarry Smith   ierr  = PetscTokenDestroy(&token);CHKERRQ(ierr);
2904e5c89e4eSSatish Balay   *nmax = n;
2905e5c89e4eSSatish Balay   PetscFunctionReturn(0);
2906e5c89e4eSSatish Balay }
290706824ed3SPatrick Sanan 
290806824ed3SPatrick Sanan /*@C
290906824ed3SPatrick Sanan    PetscOptionsDeprecated - mark an option as deprecated, optionally replacing it with a new one
291006824ed3SPatrick Sanan 
291106824ed3SPatrick Sanan    Prints a deprecation warning, unless an option is supplied to suppress.
291206824ed3SPatrick Sanan 
29131c9f3c13SBarry Smith    Logically Collective
291406824ed3SPatrick Sanan 
291506824ed3SPatrick Sanan    Input Parameters:
29169503aa97SPatrick Sanan +  pre - string to prepend to name or NULL
291706824ed3SPatrick Sanan .  oldname - the old, deprecated option
291806824ed3SPatrick Sanan .  newname - the new option, or NULL if option is purely removed
29199f3a6782SPatrick Sanan .  version - a string describing the version of first deprecation, e.g. "3.9"
29209f3a6782SPatrick Sanan -  info - additional information string, or NULL.
292106824ed3SPatrick Sanan 
292206824ed3SPatrick Sanan    Options Database Keys:
292306824ed3SPatrick Sanan . -options_suppress_deprecated_warnings - do not print deprecation warnings
292406824ed3SPatrick Sanan 
292506824ed3SPatrick Sanan    Notes:
29261c9f3c13SBarry Smith    Must be called between PetscOptionsBegin() (or PetscObjectOptionsBegin()) and PetscOptionsEnd().
29271c9f3c13SBarry Smith    Only the proces of rank zero that owns the PetscOptionsItems are argument (managed by PetscOptionsBegin() or
29281c9f3c13SBarry Smith    PetscObjectOptionsBegin() prints the information
2929b40114eaSPatrick Sanan    If newname is provided, the old option is replaced. Otherwise, it remains
2930b40114eaSPatrick Sanan    in the options database.
29319f3a6782SPatrick Sanan    If an option is not replaced, the info argument should be used to advise the user
29329f3a6782SPatrick Sanan    on how to proceed.
29339f3a6782SPatrick Sanan    There is a limit on the length of the warning printed, so very long strings
29349f3a6782SPatrick Sanan    provided as info may be truncated.
293506824ed3SPatrick Sanan 
293606824ed3SPatrick Sanan    Level: developer
293706824ed3SPatrick Sanan 
293806824ed3SPatrick Sanan .seealso: PetscOptionsBegin(), PetscOptionsEnd(), PetscOptionsScalar(), PetscOptionsBool(), PetscOptionsString(), PetscOptionsSetValue()
293906824ed3SPatrick Sanan 
294006824ed3SPatrick Sanan @*/
29419f3a6782SPatrick Sanan PetscErrorCode PetscOptionsDeprecated_Private(PetscOptionItems *PetscOptionsObject,const char oldname[],const char newname[],const char version[],const char info[])
294206824ed3SPatrick Sanan {
294306824ed3SPatrick Sanan   PetscErrorCode     ierr;
294406824ed3SPatrick Sanan   PetscBool          found,quiet;
294506824ed3SPatrick Sanan   const char         *value;
294606824ed3SPatrick Sanan   const char * const quietopt="-options_suppress_deprecated_warnings";
29479f3a6782SPatrick Sanan   char               msg[4096];
2948b0bdc838SStefano Zampini   char               *prefix = NULL;
2949b0bdc838SStefano Zampini   PetscOptions       options = NULL;
2950b0bdc838SStefano Zampini   MPI_Comm           comm = PETSC_COMM_SELF;
295106824ed3SPatrick Sanan 
295206824ed3SPatrick Sanan   PetscFunctionBegin;
295306824ed3SPatrick Sanan   PetscValidCharPointer(oldname,2);
295406824ed3SPatrick Sanan   PetscValidCharPointer(version,4);
2955b0bdc838SStefano Zampini   if (PetscOptionsObject) {
2956b0bdc838SStefano Zampini     prefix  = PetscOptionsObject->prefix;
2957b0bdc838SStefano Zampini     options = PetscOptionsObject->options;
2958b0bdc838SStefano Zampini     comm    = PetscOptionsObject->comm;
2959b0bdc838SStefano Zampini   }
2960b0bdc838SStefano Zampini   ierr = PetscOptionsFindPair(options,prefix,oldname,&value,&found);CHKERRQ(ierr);
296106824ed3SPatrick Sanan   if (found) {
296206824ed3SPatrick Sanan     if (newname) {
2963b0bdc838SStefano Zampini       if (prefix) {
2964b0bdc838SStefano Zampini         ierr = PetscOptionsPrefixPush(options,prefix);CHKERRQ(ierr);
2965d255429eSPatrick Sanan       }
2966b0bdc838SStefano Zampini       ierr = PetscOptionsSetValue(options,newname,value);CHKERRQ(ierr);
2967b0bdc838SStefano Zampini       if (prefix) {
2968b0bdc838SStefano Zampini         ierr = PetscOptionsPrefixPop(options);CHKERRQ(ierr);
2969d255429eSPatrick Sanan       }
2970b0bdc838SStefano Zampini       ierr = PetscOptionsClearValue(options,oldname);CHKERRQ(ierr);
2971b40114eaSPatrick Sanan     }
297206824ed3SPatrick Sanan     quiet = PETSC_FALSE;
2973b0bdc838SStefano Zampini     ierr = PetscOptionsGetBool(options,NULL,quietopt,&quiet,NULL);CHKERRQ(ierr);
297406824ed3SPatrick Sanan     if (!quiet) {
29759f3a6782SPatrick Sanan       ierr = PetscStrcpy(msg,"** PETSc DEPRECATION WARNING ** : the option ");CHKERRQ(ierr);
29761fa95f81SSatish Balay       ierr = PetscStrcat(msg,oldname);CHKERRQ(ierr);
2977928bb9adSStefano Zampini       ierr = PetscStrcat(msg," is deprecated as of version ");CHKERRQ(ierr);
29789f3a6782SPatrick Sanan       ierr = PetscStrcat(msg,version);CHKERRQ(ierr);
29799f3a6782SPatrick Sanan       ierr = PetscStrcat(msg," and will be removed in a future release.");CHKERRQ(ierr);
298006824ed3SPatrick Sanan       if (newname) {
29819f3a6782SPatrick Sanan         ierr = PetscStrcat(msg," Please use the option ");CHKERRQ(ierr);
29829f3a6782SPatrick Sanan         ierr = PetscStrcat(msg,newname);CHKERRQ(ierr);
29839f3a6782SPatrick Sanan         ierr = PetscStrcat(msg," instead.");CHKERRQ(ierr);
298406824ed3SPatrick Sanan       }
29859f3a6782SPatrick Sanan       if (info) {
29869f3a6782SPatrick Sanan         ierr = PetscStrcat(msg," ");CHKERRQ(ierr);
29879f3a6782SPatrick Sanan         ierr = PetscStrcat(msg,info);CHKERRQ(ierr);
29889f3a6782SPatrick Sanan       }
29899f3a6782SPatrick Sanan       ierr = PetscStrcat(msg," (Silence this warning with ");CHKERRQ(ierr);
29909f3a6782SPatrick Sanan       ierr = PetscStrcat(msg,quietopt);CHKERRQ(ierr);
29919f3a6782SPatrick Sanan       ierr = PetscStrcat(msg,")\n");CHKERRQ(ierr);
2992b0bdc838SStefano Zampini       ierr = PetscPrintf(comm,msg);CHKERRQ(ierr);
299306824ed3SPatrick Sanan     }
299406824ed3SPatrick Sanan   }
299506824ed3SPatrick Sanan   PetscFunctionReturn(0);
299606824ed3SPatrick Sanan }
2997