xref: /petsc/src/sys/python/pythonsys.c (revision 412d63f862cb26880e02c0170a08c78bd206d72b)
1af0996ceSBarry Smith #include <petsc/private/petscimpl.h>       /*I "petscsys.h" I*/
2c4aff060SBarry Smith 
3c4aff060SBarry Smith /* ---------------------------------------------------------------- */
4c4aff060SBarry Smith 
5c4aff060SBarry Smith #if !defined(PETSC_PYTHON_EXE)
6c4aff060SBarry Smith #define PETSC_PYTHON_EXE "python"
7c4aff060SBarry Smith #endif
8c4aff060SBarry Smith 
9c4aff060SBarry Smith static PetscErrorCode PetscPythonFindExecutable(char pythonexe[PETSC_MAX_PATH_LEN])
10c4aff060SBarry Smith {
11ace3abfcSBarry Smith   PetscBool      flag;
12c4aff060SBarry Smith   PetscErrorCode ierr;
136e111a19SKarl Rupp 
14c4aff060SBarry Smith   PetscFunctionBegin;
15c4aff060SBarry Smith   /* get the path for the Python interpreter executable */
16c4aff060SBarry Smith   ierr = PetscStrncpy(pythonexe,PETSC_PYTHON_EXE,PETSC_MAX_PATH_LEN);CHKERRQ(ierr);
17c5929fdfSBarry Smith   ierr = PetscOptionsGetString(NULL,NULL,"-python",pythonexe,PETSC_MAX_PATH_LEN,&flag);CHKERRQ(ierr);
18c4aff060SBarry Smith   if (!flag || pythonexe[0]==0) {
19c4aff060SBarry Smith     ierr = PetscStrncpy(pythonexe,PETSC_PYTHON_EXE,PETSC_MAX_PATH_LEN);CHKERRQ(ierr);
20c4aff060SBarry Smith   }
21c4aff060SBarry Smith   PetscFunctionReturn(0);
22c4aff060SBarry Smith }
23c4aff060SBarry Smith 
24*412d63f8SBarry Smith static PetscErrorCode PetscPythonFindLibrary(const char pythonexe[PETSC_MAX_PATH_LEN],char pythonlib[PETSC_MAX_PATH_LEN])
25c4aff060SBarry Smith {
26*412d63f8SBarry Smith   const char     cmdline[] = "-c 'from distutils import sysconfig; print(sysconfig.get_config_var('LIBPYTHON'))";
27*412d63f8SBarry Smith   char           command[PETSC_MAX_PATH_LEN+1+sizeof(cmdline)+1],*eol;
28c4aff060SBarry Smith   FILE           *fp = NULL;
29ace3abfcSBarry Smith   PetscBool      found = PETSC_FALSE;
30c4aff060SBarry Smith   PetscErrorCode ierr;
31c4aff060SBarry Smith 
326e111a19SKarl Rupp   PetscFunctionBegin;
33c4aff060SBarry Smith #if defined(PETSC_PYTHON_LIB)
34c4aff060SBarry Smith   ierr = PetscStrcpy(pythonlib,PETSC_PYTHON_LIB);CHKERRQ(ierr);
35c4aff060SBarry Smith   PetscFunctionReturn(0);
36c4aff060SBarry Smith #endif
37c4aff060SBarry Smith 
38c4aff060SBarry Smith   /* call Python to find out the name of the Python dynamic library */
39c4aff060SBarry Smith   ierr = PetscStrncpy(command,pythonexe,PETSC_MAX_PATH_LEN);CHKERRQ(ierr);
40c4aff060SBarry Smith   ierr = PetscStrcat(command," ");CHKERRQ(ierr);
41c4aff060SBarry Smith   ierr = PetscStrcat(command,cmdline);CHKERRQ(ierr);
42c4aff060SBarry Smith #if defined(PETSC_HAVE_POPEN)
430298fd71SBarry Smith   ierr = PetscPOpen(PETSC_COMM_SELF,NULL,command,"r",&fp);CHKERRQ(ierr);
44*412d63f8SBarry Smith   if (!fgets(pythonlib,PETSC_MAX_PATH_LEN,fp)) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Python: bad output from executable: %s",pythonexe);
45016831caSBarry Smith   ierr = PetscPClose(PETSC_COMM_SELF,fp);CHKERRQ(ierr);
46c4aff060SBarry Smith #else
47e32f2f54SBarry Smith   SETERRQ(PETSC_COMM_SELF,1,"Python: Aborted due to missing popen()");
48c4aff060SBarry Smith #endif
49c4aff060SBarry Smith   /* remove newlines */
50*412d63f8SBarry Smith   ierr = PetscStrchr(pythonlib,'\n',&eol);CHKERRQ(ierr);
51c4aff060SBarry Smith   if (eol) eol[0] = 0;
52*412d63f8SBarry Smith   ierr = PetscTestFile(pythonlib,'r',&found);CHKERRQ(ierr);
53*412d63f8SBarry Smith   ierr = PetscInfo2(0,"Python library  %s found %d\n",pythonlib,found);CHKERRQ(ierr);
54c4aff060SBarry Smith   PetscFunctionReturn(0);
55c4aff060SBarry Smith }
56c4aff060SBarry Smith 
57c4aff060SBarry Smith /* ---------------------------------------------------------------- */
58c4aff060SBarry Smith 
59c4aff060SBarry Smith typedef struct _Py_object_t PyObject; /* fake definition */
60c4aff060SBarry Smith 
61e0ab9aedSLisandro Dalcin static PyObject* Py_None = 0;
62e0ab9aedSLisandro Dalcin 
639ac80d5eSLisandro Dalcin static const char* (*Py_GetVersion)(void);
649ac80d5eSLisandro Dalcin 
65c4aff060SBarry Smith static int       (*Py_IsInitialized)(void);
66c4aff060SBarry Smith static void      (*Py_InitializeEx)(int);
67c4aff060SBarry Smith static void      (*Py_Finalize)(void);
68c4aff060SBarry Smith 
69c4aff060SBarry Smith static void      (*PySys_SetArgv)(int,char**);
702f2e82b0SLisandro Dalcin static PyObject* (*PySys_GetObject)(const char*);
712f2e82b0SLisandro Dalcin static PyObject* (*PyObject_CallMethod)(PyObject*,const char*, const char*, ...);
72c4aff060SBarry Smith static PyObject* (*PyImport_ImportModule)(const char*);
73c4aff060SBarry Smith 
74c4aff060SBarry Smith static void      (*Py_IncRef)(PyObject*);
75c4aff060SBarry Smith static void      (*Py_DecRef)(PyObject*);
76c4aff060SBarry Smith 
77c4aff060SBarry Smith static void      (*PyErr_Clear)(void);
78c4aff060SBarry Smith static PyObject* (*PyErr_Occurred)(void);
79e0ab9aedSLisandro Dalcin static void      (*PyErr_Fetch)(PyObject**,PyObject**,PyObject**);
80e0ab9aedSLisandro Dalcin static void      (*PyErr_NormalizeException)(PyObject**,PyObject**, PyObject**);
81e0ab9aedSLisandro Dalcin static void      (*PyErr_Display)(PyObject*,PyObject*,PyObject*);
82e0ab9aedSLisandro Dalcin static void      (*PyErr_Restore)(PyObject*,PyObject*,PyObject*);
83c4aff060SBarry Smith 
84c4aff060SBarry Smith 
85c4aff060SBarry Smith #define PetscDLPyLibOpen(libname) \
86d44a1e48SBarry Smith   PetscDLLibraryAppend(PETSC_COMM_SELF,&PetscDLLibrariesLoaded,libname)
87c4aff060SBarry Smith #define PetscDLPyLibSym(symbol, value) \
880298fd71SBarry Smith   PetscDLLibrarySym(PETSC_COMM_SELF,&PetscDLLibrariesLoaded,NULL,symbol,(void**)value)
89c4aff060SBarry Smith #define PetscDLPyLibClose(comm) \
90c4aff060SBarry Smith   do { } while (0)
91c4aff060SBarry Smith 
92c4aff060SBarry Smith static PetscErrorCode PetscPythonLoadLibrary(const char pythonlib[])
93c4aff060SBarry Smith {
94c4aff060SBarry Smith   PetscErrorCode ierr;
95c4aff060SBarry Smith 
966e111a19SKarl Rupp   PetscFunctionBegin;
97c4aff060SBarry Smith   /* open the Python dynamic library */
98c4aff060SBarry Smith   ierr = PetscDLPyLibOpen(pythonlib);CHKERRQ(ierr);
99c4aff060SBarry Smith   ierr = PetscInfo1(0,"Python: loaded dynamic library %s\n", pythonlib);CHKERRQ(ierr);
100c4aff060SBarry Smith   /* look required symbols from the Python C-API */
101e0ab9aedSLisandro Dalcin   ierr = PetscDLPyLibSym("_Py_NoneStruct"        , &Py_None               );CHKERRQ(ierr);
1029ac80d5eSLisandro Dalcin   ierr = PetscDLPyLibSym("Py_GetVersion"         , &Py_GetVersion         );CHKERRQ(ierr);
103c4aff060SBarry Smith   ierr = PetscDLPyLibSym("Py_IsInitialized"      , &Py_IsInitialized      );CHKERRQ(ierr);
104c4aff060SBarry Smith   ierr = PetscDLPyLibSym("Py_InitializeEx"       , &Py_InitializeEx       );CHKERRQ(ierr);
105c4aff060SBarry Smith   ierr = PetscDLPyLibSym("Py_Finalize"           , &Py_Finalize           );CHKERRQ(ierr);
1062f2e82b0SLisandro Dalcin   ierr = PetscDLPyLibSym("PySys_GetObject"       , &PySys_GetObject       );CHKERRQ(ierr);
107c4aff060SBarry Smith   ierr = PetscDLPyLibSym("PySys_SetArgv"         , &PySys_SetArgv         );CHKERRQ(ierr);
1082f2e82b0SLisandro Dalcin   ierr = PetscDLPyLibSym("PyObject_CallMethod"   , &PyObject_CallMethod   );CHKERRQ(ierr);
109c4aff060SBarry Smith   ierr = PetscDLPyLibSym("PyImport_ImportModule" , &PyImport_ImportModule );CHKERRQ(ierr);
110c4aff060SBarry Smith   ierr = PetscDLPyLibSym("Py_IncRef"             , &Py_IncRef             );CHKERRQ(ierr);
111c4aff060SBarry Smith   ierr = PetscDLPyLibSym("Py_DecRef"             , &Py_DecRef             );CHKERRQ(ierr);
112c4aff060SBarry Smith   ierr = PetscDLPyLibSym("PyErr_Clear"           , &PyErr_Clear           );CHKERRQ(ierr);
113c4aff060SBarry Smith   ierr = PetscDLPyLibSym("PyErr_Occurred"        , &PyErr_Occurred        );CHKERRQ(ierr);
114e0ab9aedSLisandro Dalcin   ierr = PetscDLPyLibSym("PyErr_Fetch"             , &PyErr_Fetch             );CHKERRQ(ierr);
115e0ab9aedSLisandro Dalcin   ierr = PetscDLPyLibSym("PyErr_NormalizeException", &PyErr_NormalizeException);CHKERRQ(ierr);
116e0ab9aedSLisandro Dalcin   ierr = PetscDLPyLibSym("PyErr_Display",            &PyErr_Display           );CHKERRQ(ierr);
117e0ab9aedSLisandro Dalcin   ierr = PetscDLPyLibSym("PyErr_Restore",            &PyErr_Restore           );CHKERRQ(ierr);
118c4aff060SBarry Smith   /* XXX TODO: check that ALL symbols were there !!! */
119e0ab9aedSLisandro Dalcin   if (!Py_None)          SETERRQ(PETSC_COMM_SELF,1,"Python: failed to load symbols from dynamic library");
1209ac80d5eSLisandro Dalcin   if (!Py_GetVersion)    SETERRQ(PETSC_COMM_SELF,1,"Python: failed to load symbols from dynamic library");
121c1235816SBarry Smith   if (!Py_IsInitialized) SETERRQ(PETSC_COMM_SELF,1,"Python: failed to load symbols from dynamic library");
122c1235816SBarry Smith   if (!Py_InitializeEx)  SETERRQ(PETSC_COMM_SELF,1,"Python: failed to load symbols from dynamic library");
123c1235816SBarry Smith   if (!Py_Finalize)      SETERRQ(PETSC_COMM_SELF,1,"Python: failed to load symbols from dynamic library");
124c4aff060SBarry Smith   ierr = PetscInfo(0,"Python: all required symbols loaded from Python dynamic library\n");CHKERRQ(ierr);
125c4aff060SBarry Smith   PetscFunctionReturn(0);
126c4aff060SBarry Smith }
127c4aff060SBarry Smith 
128c4aff060SBarry Smith /* ---------------------------------------------------------------- */
129c4aff060SBarry Smith 
130c4aff060SBarry Smith static char      PetscPythonExe[PETSC_MAX_PATH_LEN] = { 0 };
131c4aff060SBarry Smith static char      PetscPythonLib[PETSC_MAX_PATH_LEN] = { 0 };
132ace3abfcSBarry Smith static PetscBool PetscBeganPython = PETSC_FALSE;
133c4aff060SBarry Smith 
134c4aff060SBarry Smith /*@C
135c4aff060SBarry Smith   PetscPythonFinalize - Finalize Python.
136c4aff060SBarry Smith 
137c4aff060SBarry Smith   Level: intermediate
138c4aff060SBarry Smith 
139c4aff060SBarry Smith .keywords: Python
140c4aff060SBarry Smith @*/
1417087cfbeSBarry Smith PetscErrorCode  PetscPythonFinalize(void)
142c4aff060SBarry Smith {
143c4aff060SBarry Smith   PetscFunctionBegin;
144c4aff060SBarry Smith   if (PetscBeganPython) { if (Py_IsInitialized()) Py_Finalize(); }
145c4aff060SBarry Smith   PetscBeganPython = PETSC_FALSE;
146c4aff060SBarry Smith   PetscFunctionReturn(0);
147c4aff060SBarry Smith }
148c4aff060SBarry Smith 
149c4aff060SBarry Smith /*@C
150c4aff060SBarry Smith   PetscPythonInitialize - Initialize Python and import petsc4py.
151c4aff060SBarry Smith 
152c4aff060SBarry Smith    Input Parameter:
1530298fd71SBarry Smith +  pyexe - path to the Python interpreter executable, or NULL.
1540298fd71SBarry Smith -  pylib - full path to the Python dynamic library, or NULL.
155c4aff060SBarry Smith 
156c4aff060SBarry Smith   Level: intermediate
157c4aff060SBarry Smith 
158c4aff060SBarry Smith .keywords: Python
159c4aff060SBarry Smith 
160c4aff060SBarry Smith @*/
1617087cfbeSBarry Smith PetscErrorCode  PetscPythonInitialize(const char pyexe[],const char pylib[])
162c4aff060SBarry Smith {
163c4aff060SBarry Smith   PyObject       *module = 0;
164c4aff060SBarry Smith   PetscErrorCode ierr;
1656e111a19SKarl Rupp 
166c4aff060SBarry Smith   PetscFunctionBegin;
167c4aff060SBarry Smith   if (PetscBeganPython) PetscFunctionReturn(0);
168c4aff060SBarry Smith   /* Python executable */
169c4aff060SBarry Smith   if (pyexe && pyexe[0] != 0) {
170c4aff060SBarry Smith     ierr = PetscStrncpy(PetscPythonExe,pyexe,sizeof(PetscPythonExe));CHKERRQ(ierr);
171c4aff060SBarry Smith   } else {
172c4aff060SBarry Smith     ierr = PetscPythonFindExecutable(PetscPythonExe);CHKERRQ(ierr);
173c4aff060SBarry Smith   }
174c4aff060SBarry Smith   /* Python dynamic library */
175c4aff060SBarry Smith   if (pylib && pylib[0] != 0) {
176c4aff060SBarry Smith     ierr = PetscStrncpy(PetscPythonLib,pylib,sizeof(PetscPythonLib));CHKERRQ(ierr);
177c4aff060SBarry Smith   } else {
178c4aff060SBarry Smith     ierr = PetscPythonFindLibrary(PetscPythonExe,PetscPythonLib);CHKERRQ(ierr);
179c4aff060SBarry Smith   }
180c4aff060SBarry Smith   /* dynamically load Python library */
181c4aff060SBarry Smith   ierr = PetscPythonLoadLibrary(PetscPythonLib);CHKERRQ(ierr);
182c4aff060SBarry Smith   /* initialize Python */
183c4aff060SBarry Smith   PetscBeganPython = PETSC_FALSE;
184c4aff060SBarry Smith   if (!Py_IsInitialized()) {
1852f2e82b0SLisandro Dalcin     static PetscBool registered = PETSC_FALSE;
1862f2e82b0SLisandro Dalcin     const char       *py_version;
1872f2e82b0SLisandro Dalcin     PyObject         *sys_path;
1882f2e82b0SLisandro Dalcin     char             path[PETSC_MAX_PATH_LEN] = { 0 };
189a297a907SKarl Rupp 
1902f2e82b0SLisandro Dalcin     /* initialize Python */
1912f2e82b0SLisandro Dalcin     Py_InitializeEx(0); /* 0: do not install signal handlers */
1922f2e82b0SLisandro Dalcin     /*  build 'sys.argv' list */
1932f2e82b0SLisandro Dalcin     py_version = Py_GetVersion();
1949ac80d5eSLisandro Dalcin     if (py_version[0] == '2') {
1952f2e82b0SLisandro Dalcin       int argc = 0; char **argv = 0;
196c4aff060SBarry Smith       ierr = PetscGetArgs(&argc,&argv);CHKERRQ(ierr);
1972f2e82b0SLisandro Dalcin       PySys_SetArgv(argc,argv);
1982f2e82b0SLisandro Dalcin     }
1992f2e82b0SLisandro Dalcin     if (py_version[0] == '3') {
2002f2e82b0SLisandro Dalcin       /* XXX 'argv' is type 'wchar_t**' */
2010298fd71SBarry Smith       PySys_SetArgv(0,NULL);
2022f2e82b0SLisandro Dalcin     }
2032f2e82b0SLisandro Dalcin     /* add PETSC_LIB_DIR in front of 'sys.path' */
2042f2e82b0SLisandro Dalcin     sys_path = PySys_GetObject("path");
2052f2e82b0SLisandro Dalcin     if (sys_path) {
2062f2e82b0SLisandro Dalcin       ierr = PetscStrreplace(PETSC_COMM_SELF,"${PETSC_LIB_DIR}",path,sizeof(path));CHKERRQ(ierr);
2072f2e82b0SLisandro Dalcin       Py_DecRef(PyObject_CallMethod(sys_path,"insert","is",(int)0,(char*)path));
2089ac80d5eSLisandro Dalcin     }
209c4aff060SBarry Smith     /* register finalizer */
210c4aff060SBarry Smith     if (!registered) {
211c4aff060SBarry Smith       ierr = PetscRegisterFinalize(PetscPythonFinalize);CHKERRQ(ierr);
212a297a907SKarl Rupp 
213c4aff060SBarry Smith       registered = PETSC_TRUE;
214c4aff060SBarry Smith     }
215c4aff060SBarry Smith     PetscBeganPython = PETSC_TRUE;
216c4aff060SBarry Smith   }
217c4aff060SBarry Smith   /* import 'petsc4py.PETSc' module */
218c4aff060SBarry Smith   module = PyImport_ImportModule("petsc4py.PETSc");
219c4aff060SBarry Smith   if (module) {
220c4aff060SBarry Smith     ierr = PetscInfo(0,"Python: successfully imported  module 'petsc4py.PETSc'\n");CHKERRQ(ierr);
221a297a907SKarl Rupp 
222c4aff060SBarry Smith     Py_DecRef(module); module = 0;
223c4aff060SBarry Smith   } else {
224e0ab9aedSLisandro Dalcin     PetscPythonPrintError();
225e32f2f54SBarry Smith     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Python: could not import module 'petsc4py.PETSc', perhaps your PYTHONPATH does not contain it\n");
226c4aff060SBarry Smith   }
227c4aff060SBarry Smith   PetscFunctionReturn(0);
228c4aff060SBarry Smith }
229c4aff060SBarry Smith 
230e0ab9aedSLisandro Dalcin /*@C
231e0ab9aedSLisandro Dalcin   PetscPythonPrintError - Print Python errors.
232e0ab9aedSLisandro Dalcin 
233e0ab9aedSLisandro Dalcin   Level: developer
234e0ab9aedSLisandro Dalcin 
235e0ab9aedSLisandro Dalcin .keywords: Python
236e0ab9aedSLisandro Dalcin 
237e0ab9aedSLisandro Dalcin @*/
2387087cfbeSBarry Smith PetscErrorCode  PetscPythonPrintError(void)
239e0ab9aedSLisandro Dalcin {
240e0ab9aedSLisandro Dalcin   PyObject *exc=0, *val=0, *tb=0;
2416e111a19SKarl Rupp 
242e0ab9aedSLisandro Dalcin   PetscFunctionBegin;
243e0ab9aedSLisandro Dalcin   if (!PetscBeganPython) PetscFunctionReturn(0);
244e0ab9aedSLisandro Dalcin   if (!PyErr_Occurred()) PetscFunctionReturn(0);
245e0ab9aedSLisandro Dalcin   PyErr_Fetch(&exc,&val,&tb);
246e0ab9aedSLisandro Dalcin   PyErr_NormalizeException(&exc,&val,&tb);
247e0ab9aedSLisandro Dalcin   PyErr_Display(exc ? exc : Py_None,
248e0ab9aedSLisandro Dalcin                 val ? val : Py_None,
249e0ab9aedSLisandro Dalcin                 tb  ? tb  : Py_None);
250e0ab9aedSLisandro Dalcin   PyErr_Restore(exc,val,tb);
251e0ab9aedSLisandro Dalcin   PetscFunctionReturn(0);
252e0ab9aedSLisandro Dalcin }
253e0ab9aedSLisandro Dalcin 
254c4aff060SBarry Smith /* ---------------------------------------------------------------- */
2555180491cSLisandro Dalcin 
2568cc058d9SJed Brown PETSC_EXTERN PetscErrorCode (*PetscPythonMonitorSet_C)(PetscObject,const char[]);
2570298fd71SBarry Smith PetscErrorCode (*PetscPythonMonitorSet_C)(PetscObject,const char[]) = NULL;
2585180491cSLisandro Dalcin 
2595180491cSLisandro Dalcin /*@C
2605180491cSLisandro Dalcin   PetscPythonMonitorSet - Set Python monitor
2615180491cSLisandro Dalcin 
2625180491cSLisandro Dalcin   Level: developer
2635180491cSLisandro Dalcin 
2645180491cSLisandro Dalcin .keywords: Python
2655180491cSLisandro Dalcin 
2665180491cSLisandro Dalcin @*/
2675180491cSLisandro Dalcin PetscErrorCode PetscPythonMonitorSet(PetscObject obj, const char url[])
2685180491cSLisandro Dalcin {
2695180491cSLisandro Dalcin   PetscErrorCode ierr;
2706e111a19SKarl Rupp 
2715180491cSLisandro Dalcin   PetscFunctionBegin;
2725180491cSLisandro Dalcin   PetscValidHeader(obj,1);
2735180491cSLisandro Dalcin   PetscValidCharPointer(url,2);
2746c4ed002SBarry Smith   if (!PetscPythonMonitorSet_C) {
2750298fd71SBarry Smith     ierr = PetscPythonInitialize(NULL,NULL);CHKERRQ(ierr);
2766c4ed002SBarry Smith     if (!PetscPythonMonitorSet_C) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"Couldn't initialize Python support for monitors");
2775180491cSLisandro Dalcin   }
2785180491cSLisandro Dalcin   ierr = PetscPythonMonitorSet_C(obj,url);CHKERRQ(ierr);
2795180491cSLisandro Dalcin   PetscFunctionReturn(0);
2805180491cSLisandro Dalcin }
2815180491cSLisandro Dalcin 
2825180491cSLisandro Dalcin /* ---------------------------------------------------------------- */
283