1c4762a1bSJed Brown 2c4762a1bSJed Brown static char help[] = "Demonstrates using the PetscBag Object\n\n"; 3c4762a1bSJed Brown 4c4762a1bSJed Brown /*T 5c4762a1bSJed Brown Concepts: bags; 6c4762a1bSJed Brown Processors: n 7c4762a1bSJed Brown T*/ 8c4762a1bSJed Brown 9c4762a1bSJed Brown #include <petscsys.h> 10c4762a1bSJed Brown #include <petscbag.h> 11c4762a1bSJed Brown #include <petscviewer.h> 12c4762a1bSJed Brown 13c4762a1bSJed Brown /* 14c4762a1bSJed Brown Enum variables can be stored in a bag but require a string array 15c4762a1bSJed Brown to name their fields. The fourth entry in this example is the name 16c4762a1bSJed Brown of the enum, the fifth is the prefix (none in this case), and the last 17c4762a1bSJed Brown entry is the null string. 18c4762a1bSJed Brown */ 19c4762a1bSJed Brown typedef enum { 20c4762a1bSJed Brown THIS = 0, THAT = 1, THE_OTHER = 2 21c4762a1bSJed Brown } YourChoice; 22c4762a1bSJed Brown const char *EnumeratedChoices[] = {"THIS","THAT","THE_OTHER","EnumeratedChoices","",0}; 23c4762a1bSJed Brown 24c4762a1bSJed Brown /* 25c4762a1bSJed Brown Data structures can be used in a bag as long as they 26c4762a1bSJed Brown are declared in the bag with a variable, not with a pointer. 27c4762a1bSJed Brown */ 28c4762a1bSJed Brown typedef struct { 29c4762a1bSJed Brown PetscReal x1,x2; 30c4762a1bSJed Brown } TwoVec; 31c4762a1bSJed Brown 32c4762a1bSJed Brown /* 33c4762a1bSJed Brown Define a C struct that will contain my program's parameters. 34c4762a1bSJed Brown 35c4762a1bSJed Brown A PETSc bag is merely a representation of a C struct that can be printed, saved to a file and loaded from a file. 36c4762a1bSJed Brown */ 37c4762a1bSJed Brown typedef struct { 38c4762a1bSJed Brown PetscScalar W; 39c4762a1bSJed Brown PetscReal rho; 40c4762a1bSJed Brown TwoVec pos; 41c4762a1bSJed Brown PetscInt Ii; 42c4762a1bSJed Brown PetscInt iarray[3]; 43c4762a1bSJed Brown PetscReal rarray[2]; 44c4762a1bSJed Brown PetscBool T; 45c4762a1bSJed Brown PetscBool Tarray[3]; 46c4762a1bSJed Brown PetscDataType dt; 47c4762a1bSJed Brown char filename[PETSC_MAX_PATH_LEN]; 48c4762a1bSJed Brown YourChoice which; 49c4762a1bSJed Brown } Parameter; 50c4762a1bSJed Brown 51c4762a1bSJed Brown int main(int argc,char **argv) 52c4762a1bSJed Brown { 53c4762a1bSJed Brown PetscErrorCode ierr; 54c4762a1bSJed Brown PetscBag bag; 55c4762a1bSJed Brown Parameter *params; 56c4762a1bSJed Brown PetscViewer viewer; 57c4762a1bSJed Brown PetscBool flg; 58c4762a1bSJed Brown char filename[PETSC_MAX_PATH_LEN] = "binaryoutput"; 59c4762a1bSJed Brown 60c4762a1bSJed Brown /* 61c4762a1bSJed Brown Every PETSc routine should begin with the PetscInitialize() routine. 62c4762a1bSJed Brown argc, argv - These command line arguments are taken to extract the options 63c4762a1bSJed Brown supplied to PETSc and options supplied to MPI. 64c4762a1bSJed Brown help - When PETSc executable is invoked with the option -help, 65c4762a1bSJed Brown it prints the various options that can be applied at 66c4762a1bSJed Brown runtime. The user can use the "help" variable place 67c4762a1bSJed Brown additional help messages in this printout. 68c4762a1bSJed Brown */ 69c4762a1bSJed Brown ierr = PetscInitialize(&argc,&argv,(char*)0,help);if (ierr) return ierr; 70c4762a1bSJed Brown 71c4762a1bSJed Brown /* Create an empty bag */ 72*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagCreate(PETSC_COMM_WORLD,sizeof(Parameter),&bag)); 73*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagGetData(bag,(void**)¶ms)); 74c4762a1bSJed Brown 75c4762a1bSJed Brown /* register variables, defaults, names, help strings */ 76*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagSetName(bag,"ParameterBag","contains parameters for simulations of top-secret, dangerous physics")); 77*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagSetOptionsPrefix(bag, "pbag_")); 78*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterString(bag,¶ms->filename,PETSC_MAX_PATH_LEN,"myfile","filename","Name of secret file")); 79*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterReal (bag,¶ms->rho,3.0,"rho","Density, kg/m^3")); 80*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterScalar(bag,¶ms->W, 5.0,"W","Vertical velocity, m/sec")); 81*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterInt (bag,¶ms->Ii, 2,"modes_x","Number of modes in x-direction")); 82c4762a1bSJed Brown 83c4762a1bSJed Brown params->iarray[0] = 1; 84c4762a1bSJed Brown params->iarray[1] = 2; 85c4762a1bSJed Brown params->iarray[2] = 3; 86c4762a1bSJed Brown 87*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterIntArray(bag,¶ms->iarray, 3,"int_array","Int array with 3 locations")); 88c4762a1bSJed Brown 89c4762a1bSJed Brown params->rarray[0] = -1.0; 90c4762a1bSJed Brown params->rarray[1] = -2.0; 91c4762a1bSJed Brown 92*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterRealArray(bag,¶ms->rarray, 2,"real_array","Real array with 2 locations")); 93*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterBool (bag,¶ms->T, PETSC_FALSE,"do_output","Write output file (yes/no)")); 94*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterBoolArray(bag,¶ms->Tarray, 3,"bool_array","Bool array with 3 locations")); 95*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterEnum (bag,¶ms->dt, PetscDataTypes,(PetscEnum)PETSC_INT,"dt","meaningless datatype")); 96*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterReal (bag,¶ms->pos.x1,1.0,"x1","x position")); 97*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterReal (bag,¶ms->pos.x2,1.9,"x2","y position")); 98*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterEnum (bag,¶ms->which, EnumeratedChoices, (PetscEnum)THAT, "choose","Express yourself by choosing among enumerated things")); 99c4762a1bSJed Brown 100c4762a1bSJed Brown /* This option allows loading user-provided PetscBag */ 101*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsGetString(NULL,NULL,"-f",filename,sizeof(filename),&flg)); 102c4762a1bSJed Brown if (!flg) { 103c4762a1bSJed Brown 104c4762a1bSJed Brown /* write bag to stdio & binary file */ 105*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagView(bag,PETSC_VIEWER_STDOUT_WORLD)); 106*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscViewerBinaryOpen(PETSC_COMM_WORLD,filename,FILE_MODE_WRITE,&viewer)); 107*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagView(bag,viewer)); 108*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscViewerDestroy(&viewer)); 109c4762a1bSJed Brown } 110c4762a1bSJed Brown 111*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscMemzero(params,sizeof(Parameter))); 112c4762a1bSJed Brown 113c4762a1bSJed Brown /* load bag from file & write to stdio */ 114*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscViewerBinaryOpen(PETSC_COMM_WORLD,filename,FILE_MODE_READ,&viewer)); 115*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagLoad(viewer,bag)); 116*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscViewerDestroy(&viewer)); 117*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagSetFromOptions(bag)); 118*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagView(bag,PETSC_VIEWER_STDOUT_WORLD)); 119c4762a1bSJed Brown 120c4762a1bSJed Brown /* reuse the parameter struct */ 121*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagGetData(bag,(void**)¶ms)); 122*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscPrintf(PETSC_COMM_WORLD,"The value of rho after loading is: %f\n",(double)params->rho)); 123c4762a1bSJed Brown 124c4762a1bSJed Brown /* clean up and exit */ 125*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagDestroy(&bag)); 126c4762a1bSJed Brown ierr = PetscFinalize(); 127c4762a1bSJed Brown return ierr; 128c4762a1bSJed Brown } 129c4762a1bSJed Brown 130c4762a1bSJed Brown /*TEST 131c4762a1bSJed Brown 132c4762a1bSJed Brown test: 133c4762a1bSJed Brown args: -pbag_rho 44 -pbag_do_output true 13474a82d2eSLisandro Dalcin requires: !complex 135c4762a1bSJed Brown 136c4762a1bSJed Brown test: 137c4762a1bSJed Brown suffix: yaml 138951eb098SLisandro Dalcin requires: !complex 139951eb098SLisandro Dalcin args: -options_file bag.yml -options_view 140362febeeSStefano Zampini filter: egrep -v "(options_left|options_view|malloc_dump|malloc_test|saws_port_auto_select|display|check_pointer_intensity|error_output_stdout|nox|vecscatter_mpi1|use_gpu_aware_mpi|checkstack)" 141c4762a1bSJed Brown localrunfiles: bag.yml 142c4762a1bSJed Brown 143c4762a1bSJed Brown TEST*/ 144