1c4762a1bSJed Brown 2c4762a1bSJed Brown static char help[] = "Demonstrates using the PetscBag Object\n\n"; 3c4762a1bSJed Brown 4c4762a1bSJed Brown /*T 5c4762a1bSJed Brown Concepts: bags; 6c4762a1bSJed Brown Processors: n 7c4762a1bSJed Brown T*/ 8c4762a1bSJed Brown 9c4762a1bSJed Brown 10c4762a1bSJed Brown #include <petscsys.h> 11c4762a1bSJed Brown #include <petscbag.h> 12c4762a1bSJed Brown #include <petscviewer.h> 13c4762a1bSJed Brown 14c4762a1bSJed Brown /* 15c4762a1bSJed Brown Enum variables can be stored in a bag but require a string array 16c4762a1bSJed Brown to name their fields. The fourth entry in this example is the name 17c4762a1bSJed Brown of the enum, the fifth is the prefix (none in this case), and the last 18c4762a1bSJed Brown entry is the null string. 19c4762a1bSJed Brown */ 20c4762a1bSJed Brown typedef enum { 21c4762a1bSJed Brown THIS = 0, THAT = 1, THE_OTHER = 2 22c4762a1bSJed Brown } YourChoice; 23c4762a1bSJed Brown const char *EnumeratedChoices[] = {"THIS","THAT","THE_OTHER","EnumeratedChoices","",0}; 24c4762a1bSJed Brown 25c4762a1bSJed Brown /* 26c4762a1bSJed Brown Data structures can be used in a bag as long as they 27c4762a1bSJed Brown are declared in the bag with a variable, not with a pointer. 28c4762a1bSJed Brown */ 29c4762a1bSJed Brown typedef struct { 30c4762a1bSJed Brown PetscReal x1,x2; 31c4762a1bSJed Brown } TwoVec; 32c4762a1bSJed Brown 33c4762a1bSJed Brown /* 34c4762a1bSJed Brown Define a C struct that will contain my program's parameters. 35c4762a1bSJed Brown 36c4762a1bSJed Brown A PETSc bag is merely a representation of a C struct that can be printed, saved to a file and loaded from a file. 37c4762a1bSJed Brown */ 38c4762a1bSJed Brown typedef struct { 39c4762a1bSJed Brown PetscScalar W; 40c4762a1bSJed Brown PetscReal rho; 41c4762a1bSJed Brown TwoVec pos; 42c4762a1bSJed Brown PetscInt Ii; 43c4762a1bSJed Brown PetscInt iarray[3]; 44c4762a1bSJed Brown PetscReal rarray[2]; 45c4762a1bSJed Brown PetscBool T; 46c4762a1bSJed Brown PetscBool Tarray[3]; 47c4762a1bSJed Brown PetscDataType dt; 48c4762a1bSJed Brown char filename[PETSC_MAX_PATH_LEN]; 49c4762a1bSJed Brown YourChoice which; 50c4762a1bSJed Brown } Parameter; 51c4762a1bSJed Brown 52c4762a1bSJed Brown 53c4762a1bSJed Brown int main(int argc,char **argv) 54c4762a1bSJed Brown { 55c4762a1bSJed Brown PetscErrorCode ierr; 56c4762a1bSJed Brown PetscBag bag; 57c4762a1bSJed Brown Parameter *params; 58c4762a1bSJed Brown PetscViewer viewer; 59c4762a1bSJed Brown PetscBool flg; 60c4762a1bSJed Brown char filename[PETSC_MAX_PATH_LEN] = "binaryoutput"; 61c4762a1bSJed Brown 62c4762a1bSJed Brown /* 63c4762a1bSJed Brown Every PETSc routine should begin with the PetscInitialize() routine. 64c4762a1bSJed Brown argc, argv - These command line arguments are taken to extract the options 65c4762a1bSJed Brown supplied to PETSc and options supplied to MPI. 66c4762a1bSJed Brown help - When PETSc executable is invoked with the option -help, 67c4762a1bSJed Brown it prints the various options that can be applied at 68c4762a1bSJed Brown runtime. The user can use the "help" variable place 69c4762a1bSJed Brown additional help messages in this printout. 70c4762a1bSJed Brown */ 71c4762a1bSJed Brown ierr = PetscInitialize(&argc,&argv,(char*)0,help);if (ierr) return ierr; 72c4762a1bSJed Brown 73c4762a1bSJed Brown /* Create an empty bag */ 74c4762a1bSJed Brown ierr = PetscBagCreate(PETSC_COMM_WORLD,sizeof(Parameter),&bag);CHKERRQ(ierr); 75c4762a1bSJed Brown ierr = PetscBagGetData(bag,(void**)¶ms);CHKERRQ(ierr); 76c4762a1bSJed Brown 77c4762a1bSJed Brown /* register variables, defaults, names, help strings */ 78c4762a1bSJed Brown ierr = PetscBagSetName(bag,"ParameterBag","contains parameters for simulations of top-secret, dangerous physics");CHKERRQ(ierr); 79c4762a1bSJed Brown ierr = PetscBagSetOptionsPrefix(bag, "pbag_");CHKERRQ(ierr); 80c4762a1bSJed Brown ierr = PetscBagRegisterString(bag,¶ms->filename,PETSC_MAX_PATH_LEN,"myfile","filename","Name of secret file");CHKERRQ(ierr); 81c4762a1bSJed Brown ierr = PetscBagRegisterReal (bag,¶ms->rho,3.0,"rho","Density, kg/m^3");CHKERRQ(ierr); 82c4762a1bSJed Brown ierr = PetscBagRegisterScalar(bag,¶ms->W, 5.0,"W","Vertical velocity, m/sec");CHKERRQ(ierr); 83c4762a1bSJed Brown ierr = PetscBagRegisterInt (bag,¶ms->Ii, 2,"modes_x","Number of modes in x-direction");CHKERRQ(ierr); 84c4762a1bSJed Brown 85c4762a1bSJed Brown params->iarray[0] = 1; 86c4762a1bSJed Brown params->iarray[1] = 2; 87c4762a1bSJed Brown params->iarray[2] = 3; 88c4762a1bSJed Brown 89c4762a1bSJed Brown ierr = PetscBagRegisterIntArray(bag,¶ms->iarray, 3,"int_array","Int array with 3 locations");CHKERRQ(ierr); 90c4762a1bSJed Brown 91c4762a1bSJed Brown params->rarray[0] = -1.0; 92c4762a1bSJed Brown params->rarray[1] = -2.0; 93c4762a1bSJed Brown 94c4762a1bSJed Brown ierr = PetscBagRegisterRealArray(bag,¶ms->rarray, 2,"real_array","Real array with 2 locations");CHKERRQ(ierr); 95c4762a1bSJed Brown ierr = PetscBagRegisterBool (bag,¶ms->T, PETSC_FALSE,"do_output","Write output file (yes/no)");CHKERRQ(ierr); 96c4762a1bSJed Brown ierr = PetscBagRegisterBoolArray(bag,¶ms->Tarray, 3,"bool_array","Bool array with 3 locations");CHKERRQ(ierr); 97c4762a1bSJed Brown ierr = PetscBagRegisterEnum (bag,¶ms->dt, PetscDataTypes,(PetscEnum)PETSC_INT,"dt","meaningless datatype");CHKERRQ(ierr); 98c4762a1bSJed Brown ierr = PetscBagRegisterReal (bag,¶ms->pos.x1,1.0,"x1","x position");CHKERRQ(ierr); 99c4762a1bSJed Brown ierr = PetscBagRegisterReal (bag,¶ms->pos.x2,1.9,"x2","y position");CHKERRQ(ierr); 100c4762a1bSJed Brown ierr = PetscBagRegisterEnum (bag,¶ms->which, EnumeratedChoices, (PetscEnum)THAT, "choose","Express yourself by choosing among enumerated things");CHKERRQ(ierr); 101c4762a1bSJed Brown 102c4762a1bSJed Brown 103c4762a1bSJed Brown /* This option allows loading user-provided PetscBag */ 104c4762a1bSJed Brown ierr = PetscOptionsGetString(NULL,NULL,"-f",filename,sizeof(filename),&flg);CHKERRQ(ierr); 105c4762a1bSJed Brown if (!flg) { 106c4762a1bSJed Brown 107c4762a1bSJed Brown /* write bag to stdio & binary file */ 108c4762a1bSJed Brown ierr = PetscBagView(bag,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr); 109c4762a1bSJed Brown ierr = PetscViewerBinaryOpen(PETSC_COMM_WORLD,filename,FILE_MODE_WRITE,&viewer);CHKERRQ(ierr); 110c4762a1bSJed Brown ierr = PetscBagView(bag,viewer);CHKERRQ(ierr); 111c4762a1bSJed Brown ierr = PetscViewerDestroy(&viewer);CHKERRQ(ierr); 112c4762a1bSJed Brown } 113c4762a1bSJed Brown 114c4762a1bSJed Brown ierr = PetscMemzero(params,sizeof(Parameter));CHKERRQ(ierr); 115c4762a1bSJed Brown 116c4762a1bSJed Brown /* load bag from file & write to stdio */ 117c4762a1bSJed Brown ierr = PetscViewerBinaryOpen(PETSC_COMM_WORLD,filename,FILE_MODE_READ,&viewer);CHKERRQ(ierr); 118c4762a1bSJed Brown ierr = PetscBagLoad(viewer,bag);CHKERRQ(ierr); 119c4762a1bSJed Brown ierr = PetscViewerDestroy(&viewer);CHKERRQ(ierr); 120c4762a1bSJed Brown ierr = PetscBagSetFromOptions(bag);CHKERRQ(ierr); 121c4762a1bSJed Brown ierr = PetscBagView(bag,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr); 122c4762a1bSJed Brown 123c4762a1bSJed Brown /* reuse the parameter struct */ 124c4762a1bSJed Brown ierr = PetscBagGetData(bag,(void**)¶ms);CHKERRQ(ierr); 125c4762a1bSJed Brown ierr = PetscPrintf(PETSC_COMM_WORLD,"The value of rho after loading is: %f\n",(double)params->rho);CHKERRQ(ierr); 126c4762a1bSJed Brown 127c4762a1bSJed Brown /* clean up and exit */ 128c4762a1bSJed Brown ierr = PetscBagDestroy(&bag);CHKERRQ(ierr); 129c4762a1bSJed Brown ierr = PetscFinalize(); 130c4762a1bSJed Brown return ierr; 131c4762a1bSJed Brown } 132c4762a1bSJed Brown 133c4762a1bSJed Brown 134c4762a1bSJed Brown /*TEST 135c4762a1bSJed Brown 136c4762a1bSJed Brown test: 137c4762a1bSJed Brown args: -pbag_rho 44 -pbag_do_output true 13874a82d2eSLisandro Dalcin requires: !complex 139c4762a1bSJed Brown 140c4762a1bSJed Brown test: 141c4762a1bSJed Brown suffix: yaml 142*951eb098SLisandro Dalcin requires: !complex 143*951eb098SLisandro Dalcin args: -options_file bag.yml -options_view 144*951eb098SLisandro Dalcin filter: egrep -v "(options_left|options_view|malloc_dump|malloc_test|saws_port_auto_select|display|check_pointer_intensity|error_output_stdout|nox|vecscatter_mpi1|use_gpu_aware_mpi)" 145c4762a1bSJed Brown localrunfiles: bag.yml 146c4762a1bSJed Brown 147c4762a1bSJed Brown TEST*/ 148