1c4762a1bSJed Brown 2c4762a1bSJed Brown static char help[] = "Demonstrates using the PetscBag Object\n\n"; 3c4762a1bSJed Brown 4c4762a1bSJed Brown /*T 5c4762a1bSJed Brown Concepts: bags; 6c4762a1bSJed Brown Processors: n 7c4762a1bSJed Brown T*/ 8c4762a1bSJed Brown 9c4762a1bSJed Brown #include <petscsys.h> 10c4762a1bSJed Brown #include <petscbag.h> 11c4762a1bSJed Brown #include <petscviewer.h> 12c4762a1bSJed Brown 13c4762a1bSJed Brown /* 14c4762a1bSJed Brown Enum variables can be stored in a bag but require a string array 15c4762a1bSJed Brown to name their fields. The fourth entry in this example is the name 16c4762a1bSJed Brown of the enum, the fifth is the prefix (none in this case), and the last 17c4762a1bSJed Brown entry is the null string. 18c4762a1bSJed Brown */ 19c4762a1bSJed Brown typedef enum { 20c4762a1bSJed Brown THIS = 0, THAT = 1, THE_OTHER = 2 21c4762a1bSJed Brown } YourChoice; 22c4762a1bSJed Brown const char *EnumeratedChoices[] = {"THIS","THAT","THE_OTHER","EnumeratedChoices","",0}; 23c4762a1bSJed Brown 24c4762a1bSJed Brown /* 25c4762a1bSJed Brown Data structures can be used in a bag as long as they 26c4762a1bSJed Brown are declared in the bag with a variable, not with a pointer. 27c4762a1bSJed Brown */ 28c4762a1bSJed Brown typedef struct { 29c4762a1bSJed Brown PetscReal x1,x2; 30c4762a1bSJed Brown } TwoVec; 31c4762a1bSJed Brown 32c4762a1bSJed Brown /* 33c4762a1bSJed Brown Define a C struct that will contain my program's parameters. 34c4762a1bSJed Brown 35c4762a1bSJed Brown A PETSc bag is merely a representation of a C struct that can be printed, saved to a file and loaded from a file. 36c4762a1bSJed Brown */ 37c4762a1bSJed Brown typedef struct { 38c4762a1bSJed Brown PetscScalar W; 39c4762a1bSJed Brown PetscReal rho; 40c4762a1bSJed Brown TwoVec pos; 41c4762a1bSJed Brown PetscInt Ii; 42c4762a1bSJed Brown PetscInt iarray[3]; 43c4762a1bSJed Brown PetscReal rarray[2]; 44c4762a1bSJed Brown PetscBool T; 45c4762a1bSJed Brown PetscBool Tarray[3]; 46c4762a1bSJed Brown PetscDataType dt; 47c4762a1bSJed Brown char filename[PETSC_MAX_PATH_LEN]; 48c4762a1bSJed Brown YourChoice which; 49c4762a1bSJed Brown } Parameter; 50c4762a1bSJed Brown 51c4762a1bSJed Brown int main(int argc,char **argv) 52c4762a1bSJed Brown { 53c4762a1bSJed Brown PetscBag bag; 54c4762a1bSJed Brown Parameter *params; 55c4762a1bSJed Brown PetscViewer viewer; 56c4762a1bSJed Brown PetscBool flg; 57c4762a1bSJed Brown char filename[PETSC_MAX_PATH_LEN] = "binaryoutput"; 58c4762a1bSJed Brown 59c4762a1bSJed Brown /* 60c4762a1bSJed Brown Every PETSc routine should begin with the PetscInitialize() routine. 61c4762a1bSJed Brown argc, argv - These command line arguments are taken to extract the options 62c4762a1bSJed Brown supplied to PETSc and options supplied to MPI. 63c4762a1bSJed Brown help - When PETSc executable is invoked with the option -help, 64c4762a1bSJed Brown it prints the various options that can be applied at 65c4762a1bSJed Brown runtime. The user can use the "help" variable place 66c4762a1bSJed Brown additional help messages in this printout. 67c4762a1bSJed Brown */ 68*b122ec5aSJacob Faibussowitsch CHKERRQ(PetscInitialize(&argc,&argv,(char*)0,help)); 69c4762a1bSJed Brown 70c4762a1bSJed Brown /* Create an empty bag */ 715f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagCreate(PETSC_COMM_WORLD,sizeof(Parameter),&bag)); 725f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagGetData(bag,(void**)¶ms)); 73c4762a1bSJed Brown 74c4762a1bSJed Brown /* register variables, defaults, names, help strings */ 755f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagSetName(bag,"ParameterBag","contains parameters for simulations of top-secret, dangerous physics")); 765f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagSetOptionsPrefix(bag, "pbag_")); 775f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterString(bag,¶ms->filename,PETSC_MAX_PATH_LEN,"myfile","filename","Name of secret file")); 785f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterReal (bag,¶ms->rho,3.0,"rho","Density, kg/m^3")); 795f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterScalar(bag,¶ms->W, 5.0,"W","Vertical velocity, m/sec")); 805f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterInt (bag,¶ms->Ii, 2,"modes_x","Number of modes in x-direction")); 81c4762a1bSJed Brown 82c4762a1bSJed Brown params->iarray[0] = 1; 83c4762a1bSJed Brown params->iarray[1] = 2; 84c4762a1bSJed Brown params->iarray[2] = 3; 85c4762a1bSJed Brown 865f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterIntArray(bag,¶ms->iarray, 3,"int_array","Int array with 3 locations")); 87c4762a1bSJed Brown 88c4762a1bSJed Brown params->rarray[0] = -1.0; 89c4762a1bSJed Brown params->rarray[1] = -2.0; 90c4762a1bSJed Brown 915f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterRealArray(bag,¶ms->rarray, 2,"real_array","Real array with 2 locations")); 925f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterBool (bag,¶ms->T, PETSC_FALSE,"do_output","Write output file (yes/no)")); 935f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterBoolArray(bag,¶ms->Tarray, 3,"bool_array","Bool array with 3 locations")); 945f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterEnum (bag,¶ms->dt, PetscDataTypes,(PetscEnum)PETSC_INT,"dt","meaningless datatype")); 955f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterReal (bag,¶ms->pos.x1,1.0,"x1","x position")); 965f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterReal (bag,¶ms->pos.x2,1.9,"x2","y position")); 975f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagRegisterEnum (bag,¶ms->which, EnumeratedChoices, (PetscEnum)THAT, "choose","Express yourself by choosing among enumerated things")); 98c4762a1bSJed Brown 99c4762a1bSJed Brown /* This option allows loading user-provided PetscBag */ 1005f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsGetString(NULL,NULL,"-f",filename,sizeof(filename),&flg)); 101c4762a1bSJed Brown if (!flg) { 102c4762a1bSJed Brown 103c4762a1bSJed Brown /* write bag to stdio & binary file */ 1045f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagView(bag,PETSC_VIEWER_STDOUT_WORLD)); 1055f80ce2aSJacob Faibussowitsch CHKERRQ(PetscViewerBinaryOpen(PETSC_COMM_WORLD,filename,FILE_MODE_WRITE,&viewer)); 1065f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagView(bag,viewer)); 1075f80ce2aSJacob Faibussowitsch CHKERRQ(PetscViewerDestroy(&viewer)); 108c4762a1bSJed Brown } 109c4762a1bSJed Brown 1105f80ce2aSJacob Faibussowitsch CHKERRQ(PetscMemzero(params,sizeof(Parameter))); 111c4762a1bSJed Brown 112c4762a1bSJed Brown /* load bag from file & write to stdio */ 1135f80ce2aSJacob Faibussowitsch CHKERRQ(PetscViewerBinaryOpen(PETSC_COMM_WORLD,filename,FILE_MODE_READ,&viewer)); 1145f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagLoad(viewer,bag)); 1155f80ce2aSJacob Faibussowitsch CHKERRQ(PetscViewerDestroy(&viewer)); 1165f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagSetFromOptions(bag)); 1175f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagView(bag,PETSC_VIEWER_STDOUT_WORLD)); 118c4762a1bSJed Brown 119c4762a1bSJed Brown /* reuse the parameter struct */ 1205f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagGetData(bag,(void**)¶ms)); 1215f80ce2aSJacob Faibussowitsch CHKERRQ(PetscPrintf(PETSC_COMM_WORLD,"The value of rho after loading is: %f\n",(double)params->rho)); 122c4762a1bSJed Brown 123c4762a1bSJed Brown /* clean up and exit */ 1245f80ce2aSJacob Faibussowitsch CHKERRQ(PetscBagDestroy(&bag)); 125*b122ec5aSJacob Faibussowitsch CHKERRQ(PetscFinalize()); 126*b122ec5aSJacob Faibussowitsch return 0; 127c4762a1bSJed Brown } 128c4762a1bSJed Brown 129c4762a1bSJed Brown /*TEST 130c4762a1bSJed Brown 131c4762a1bSJed Brown test: 132c4762a1bSJed Brown args: -pbag_rho 44 -pbag_do_output true 13374a82d2eSLisandro Dalcin requires: !complex 134c4762a1bSJed Brown 135c4762a1bSJed Brown test: 136c4762a1bSJed Brown suffix: yaml 137951eb098SLisandro Dalcin requires: !complex 138951eb098SLisandro Dalcin args: -options_file bag.yml -options_view 139362febeeSStefano Zampini filter: egrep -v "(options_left|options_view|malloc_dump|malloc_test|saws_port_auto_select|display|check_pointer_intensity|error_output_stdout|nox|vecscatter_mpi1|use_gpu_aware_mpi|checkstack)" 140c4762a1bSJed Brown localrunfiles: bag.yml 141c4762a1bSJed Brown 142c4762a1bSJed Brown TEST*/ 143