xref: /petsc/src/ts/impls/implicit/discgrad/tsdiscgrad.c (revision bfe80ac4a46d58cb7760074b25f5e81b2f541d8a)
1 /*
2   Code for timestepping with discrete gradient integrators
3 */
4 #include <petsc/private/tsimpl.h> /*I   "petscts.h"   I*/
5 #include <petscdm.h>
6 
7 PetscBool  DGCite       = PETSC_FALSE;
8 const char DGCitation[] = "@article{Gonzalez1996,\n"
9                           "  title   = {Time integration and discrete Hamiltonian systems},\n"
10                           "  author  = {Oscar Gonzalez},\n"
11                           "  journal = {Journal of Nonlinear Science},\n"
12                           "  volume  = {6},\n"
13                           "  pages   = {449--467},\n"
14                           "  doi     = {10.1007/978-1-4612-1246-1_10},\n"
15                           "  year    = {1996}\n}\n";
16 
17 typedef struct {
18   PetscReal stage_time;
19   Vec       X0, X, Xdot;
20   void     *funcCtx;
21   PetscBool gonzalez;
22   PetscErrorCode (*Sfunc)(TS, PetscReal, Vec, Mat, void *);
23   PetscErrorCode (*Ffunc)(TS, PetscReal, Vec, PetscScalar *, void *);
24   PetscErrorCode (*Gfunc)(TS, PetscReal, Vec, Vec, void *);
25 } TS_DiscGrad;
26 
27 static PetscErrorCode TSDiscGradGetX0AndXdot(TS ts, DM dm, Vec *X0, Vec *Xdot)
28 {
29   TS_DiscGrad *dg = (TS_DiscGrad *)ts->data;
30 
31   PetscFunctionBegin;
32   if (X0) {
33     if (dm && dm != ts->dm) PetscCall(DMGetNamedGlobalVector(dm, "TSDiscGrad_X0", X0));
34     else *X0 = ts->vec_sol;
35   }
36   if (Xdot) {
37     if (dm && dm != ts->dm) PetscCall(DMGetNamedGlobalVector(dm, "TSDiscGrad_Xdot", Xdot));
38     else *Xdot = dg->Xdot;
39   }
40   PetscFunctionReturn(PETSC_SUCCESS);
41 }
42 
43 static PetscErrorCode TSDiscGradRestoreX0AndXdot(TS ts, DM dm, Vec *X0, Vec *Xdot)
44 {
45   PetscFunctionBegin;
46   if (X0) {
47     if (dm && dm != ts->dm) PetscCall(DMRestoreNamedGlobalVector(dm, "TSDiscGrad_X0", X0));
48   }
49   if (Xdot) {
50     if (dm && dm != ts->dm) PetscCall(DMRestoreNamedGlobalVector(dm, "TSDiscGrad_Xdot", Xdot));
51   }
52   PetscFunctionReturn(PETSC_SUCCESS);
53 }
54 
55 static PetscErrorCode DMCoarsenHook_TSDiscGrad(DM fine, DM coarse, void *ctx)
56 {
57   PetscFunctionBegin;
58   PetscFunctionReturn(PETSC_SUCCESS);
59 }
60 
61 static PetscErrorCode DMRestrictHook_TSDiscGrad(DM fine, Mat restrct, Vec rscale, Mat inject, DM coarse, void *ctx)
62 {
63   TS  ts = (TS)ctx;
64   Vec X0, Xdot, X0_c, Xdot_c;
65 
66   PetscFunctionBegin;
67   PetscCall(TSDiscGradGetX0AndXdot(ts, fine, &X0, &Xdot));
68   PetscCall(TSDiscGradGetX0AndXdot(ts, coarse, &X0_c, &Xdot_c));
69   PetscCall(MatRestrict(restrct, X0, X0_c));
70   PetscCall(MatRestrict(restrct, Xdot, Xdot_c));
71   PetscCall(VecPointwiseMult(X0_c, rscale, X0_c));
72   PetscCall(VecPointwiseMult(Xdot_c, rscale, Xdot_c));
73   PetscCall(TSDiscGradRestoreX0AndXdot(ts, fine, &X0, &Xdot));
74   PetscCall(TSDiscGradRestoreX0AndXdot(ts, coarse, &X0_c, &Xdot_c));
75   PetscFunctionReturn(PETSC_SUCCESS);
76 }
77 
78 static PetscErrorCode DMSubDomainHook_TSDiscGrad(DM dm, DM subdm, void *ctx)
79 {
80   PetscFunctionBegin;
81   PetscFunctionReturn(PETSC_SUCCESS);
82 }
83 
84 static PetscErrorCode DMSubDomainRestrictHook_TSDiscGrad(DM dm, VecScatter gscat, VecScatter lscat, DM subdm, void *ctx)
85 {
86   TS  ts = (TS)ctx;
87   Vec X0, Xdot, X0_sub, Xdot_sub;
88 
89   PetscFunctionBegin;
90   PetscCall(TSDiscGradGetX0AndXdot(ts, dm, &X0, &Xdot));
91   PetscCall(TSDiscGradGetX0AndXdot(ts, subdm, &X0_sub, &Xdot_sub));
92 
93   PetscCall(VecScatterBegin(gscat, X0, X0_sub, INSERT_VALUES, SCATTER_FORWARD));
94   PetscCall(VecScatterEnd(gscat, X0, X0_sub, INSERT_VALUES, SCATTER_FORWARD));
95 
96   PetscCall(VecScatterBegin(gscat, Xdot, Xdot_sub, INSERT_VALUES, SCATTER_FORWARD));
97   PetscCall(VecScatterEnd(gscat, Xdot, Xdot_sub, INSERT_VALUES, SCATTER_FORWARD));
98 
99   PetscCall(TSDiscGradRestoreX0AndXdot(ts, dm, &X0, &Xdot));
100   PetscCall(TSDiscGradRestoreX0AndXdot(ts, subdm, &X0_sub, &Xdot_sub));
101   PetscFunctionReturn(PETSC_SUCCESS);
102 }
103 
104 static PetscErrorCode TSSetUp_DiscGrad(TS ts)
105 {
106   TS_DiscGrad *dg = (TS_DiscGrad *)ts->data;
107   DM           dm;
108 
109   PetscFunctionBegin;
110   if (!dg->X) PetscCall(VecDuplicate(ts->vec_sol, &dg->X));
111   if (!dg->X0) PetscCall(VecDuplicate(ts->vec_sol, &dg->X0));
112   if (!dg->Xdot) PetscCall(VecDuplicate(ts->vec_sol, &dg->Xdot));
113 
114   PetscCall(TSGetDM(ts, &dm));
115   PetscCall(DMCoarsenHookAdd(dm, DMCoarsenHook_TSDiscGrad, DMRestrictHook_TSDiscGrad, ts));
116   PetscCall(DMSubDomainHookAdd(dm, DMSubDomainHook_TSDiscGrad, DMSubDomainRestrictHook_TSDiscGrad, ts));
117   PetscFunctionReturn(PETSC_SUCCESS);
118 }
119 
120 static PetscErrorCode TSSetFromOptions_DiscGrad(TS ts, PetscOptionItems PetscOptionsObject)
121 {
122   TS_DiscGrad *dg = (TS_DiscGrad *)ts->data;
123 
124   PetscFunctionBegin;
125   PetscOptionsHeadBegin(PetscOptionsObject, "Discrete Gradients ODE solver options");
126   {
127     PetscCall(PetscOptionsBool("-ts_discgrad_gonzalez", "Use Gonzalez term in discrete gradients formulation", "TSDiscGradUseGonzalez", dg->gonzalez, &dg->gonzalez, NULL));
128   }
129   PetscOptionsHeadEnd();
130   PetscFunctionReturn(PETSC_SUCCESS);
131 }
132 
133 static PetscErrorCode TSView_DiscGrad(TS ts, PetscViewer viewer)
134 {
135   PetscBool iascii;
136 
137   PetscFunctionBegin;
138   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii));
139   if (iascii) PetscCall(PetscViewerASCIIPrintf(viewer, "  Discrete Gradients\n"));
140   PetscFunctionReturn(PETSC_SUCCESS);
141 }
142 
143 static PetscErrorCode TSDiscGradIsGonzalez_DiscGrad(TS ts, PetscBool *gonzalez)
144 {
145   TS_DiscGrad *dg = (TS_DiscGrad *)ts->data;
146 
147   PetscFunctionBegin;
148   *gonzalez = dg->gonzalez;
149   PetscFunctionReturn(PETSC_SUCCESS);
150 }
151 
152 static PetscErrorCode TSDiscGradUseGonzalez_DiscGrad(TS ts, PetscBool flg)
153 {
154   TS_DiscGrad *dg = (TS_DiscGrad *)ts->data;
155 
156   PetscFunctionBegin;
157   dg->gonzalez = flg;
158   PetscFunctionReturn(PETSC_SUCCESS);
159 }
160 
161 static PetscErrorCode TSReset_DiscGrad(TS ts)
162 {
163   TS_DiscGrad *dg = (TS_DiscGrad *)ts->data;
164 
165   PetscFunctionBegin;
166   PetscCall(VecDestroy(&dg->X));
167   PetscCall(VecDestroy(&dg->X0));
168   PetscCall(VecDestroy(&dg->Xdot));
169   PetscFunctionReturn(PETSC_SUCCESS);
170 }
171 
172 static PetscErrorCode TSDestroy_DiscGrad(TS ts)
173 {
174   DM dm;
175 
176   PetscFunctionBegin;
177   PetscCall(TSReset_DiscGrad(ts));
178   PetscCall(TSGetDM(ts, &dm));
179   if (dm) {
180     PetscCall(DMCoarsenHookRemove(dm, DMCoarsenHook_TSDiscGrad, DMRestrictHook_TSDiscGrad, ts));
181     PetscCall(DMSubDomainHookRemove(dm, DMSubDomainHook_TSDiscGrad, DMSubDomainRestrictHook_TSDiscGrad, ts));
182   }
183   PetscCall(PetscFree(ts->data));
184   PetscCall(PetscObjectComposeFunction((PetscObject)ts, "TSDiscGradGetFormulation_C", NULL));
185   PetscCall(PetscObjectComposeFunction((PetscObject)ts, "TSDiscGradSetFormulation_C", NULL));
186   PetscCall(PetscObjectComposeFunction((PetscObject)ts, "TSDiscGradIsGonzalez_C", NULL));
187   PetscCall(PetscObjectComposeFunction((PetscObject)ts, "TSDiscGradUseGonzalez_C", NULL));
188   PetscFunctionReturn(PETSC_SUCCESS);
189 }
190 
191 static PetscErrorCode TSInterpolate_DiscGrad(TS ts, PetscReal t, Vec X)
192 {
193   TS_DiscGrad *dg = (TS_DiscGrad *)ts->data;
194   PetscReal    dt = t - ts->ptime;
195 
196   PetscFunctionBegin;
197   PetscCall(VecCopy(ts->vec_sol, dg->X));
198   PetscCall(VecWAXPY(X, dt, dg->Xdot, dg->X));
199   PetscFunctionReturn(PETSC_SUCCESS);
200 }
201 
202 static PetscErrorCode TSDiscGrad_SNESSolve(TS ts, Vec b, Vec x)
203 {
204   SNES     snes;
205   PetscInt nits, lits;
206 
207   PetscFunctionBegin;
208   PetscCall(TSGetSNES(ts, &snes));
209   PetscCall(SNESSolve(snes, b, x));
210   PetscCall(SNESGetIterationNumber(snes, &nits));
211   PetscCall(SNESGetLinearSolveIterations(snes, &lits));
212   ts->snes_its += nits;
213   ts->ksp_its += lits;
214   PetscFunctionReturn(PETSC_SUCCESS);
215 }
216 
217 static PetscErrorCode TSStep_DiscGrad(TS ts)
218 {
219   TS_DiscGrad *dg = (TS_DiscGrad *)ts->data;
220   TSAdapt      adapt;
221   TSStepStatus status     = TS_STEP_INCOMPLETE;
222   PetscInt     rejections = 0;
223   PetscBool    stageok, accept = PETSC_TRUE;
224   PetscReal    next_time_step = ts->time_step;
225 
226   PetscFunctionBegin;
227   PetscCall(TSGetAdapt(ts, &adapt));
228   if (!ts->steprollback) PetscCall(VecCopy(ts->vec_sol, dg->X0));
229 
230   while (!ts->reason && status != TS_STEP_COMPLETE) {
231     PetscReal shift = 1 / (0.5 * ts->time_step);
232 
233     dg->stage_time = ts->ptime + 0.5 * ts->time_step;
234 
235     PetscCall(VecCopy(dg->X0, dg->X));
236     PetscCall(TSPreStage(ts, dg->stage_time));
237     PetscCall(TSDiscGrad_SNESSolve(ts, NULL, dg->X));
238     PetscCall(TSPostStage(ts, dg->stage_time, 0, &dg->X));
239     PetscCall(TSAdaptCheckStage(adapt, ts, dg->stage_time, dg->X, &stageok));
240     if (!stageok) goto reject_step;
241 
242     status = TS_STEP_PENDING;
243     PetscCall(VecAXPBYPCZ(dg->Xdot, -shift, shift, 0, dg->X0, dg->X));
244     PetscCall(VecAXPY(ts->vec_sol, ts->time_step, dg->Xdot));
245     PetscCall(TSAdaptChoose(adapt, ts, ts->time_step, NULL, &next_time_step, &accept));
246     status = accept ? TS_STEP_COMPLETE : TS_STEP_INCOMPLETE;
247     if (!accept) {
248       PetscCall(VecCopy(dg->X0, ts->vec_sol));
249       ts->time_step = next_time_step;
250       goto reject_step;
251     }
252     ts->ptime += ts->time_step;
253     ts->time_step = next_time_step;
254     break;
255 
256   reject_step:
257     ts->reject++;
258     accept = PETSC_FALSE;
259     if (!ts->reason && ts->max_reject >= 0 && ++rejections > ts->max_reject) {
260       ts->reason = TS_DIVERGED_STEP_REJECTED;
261       PetscCall(PetscInfo(ts, "Step=%" PetscInt_FMT ", step rejections %" PetscInt_FMT " greater than current TS allowed, stopping solve\n", ts->steps, rejections));
262     }
263   }
264   PetscFunctionReturn(PETSC_SUCCESS);
265 }
266 
267 static PetscErrorCode TSGetStages_DiscGrad(TS ts, PetscInt *ns, Vec **Y)
268 {
269   TS_DiscGrad *dg = (TS_DiscGrad *)ts->data;
270 
271   PetscFunctionBegin;
272   if (ns) *ns = 1;
273   if (Y) *Y = &dg->X;
274   PetscFunctionReturn(PETSC_SUCCESS);
275 }
276 
277 /*
278   This defines the nonlinear equation that is to be solved with SNES
279     G(U) = F[t0 + 0.5*dt, U, (U-U0)/dt] = 0
280 */
281 
282 /* x = (x+x')/2 */
283 /* NEED TO CALCULATE x_{n+1} from x and x_{n}*/
284 static PetscErrorCode SNESTSFormFunction_DiscGrad(SNES snes, Vec x, Vec y, TS ts)
285 {
286   TS_DiscGrad *dg = (TS_DiscGrad *)ts->data;
287   PetscReal    norm, shift = 1 / (0.5 * ts->time_step);
288   PetscInt     n;
289   Vec          X0, Xdot, Xp, Xdiff;
290   Mat          S;
291   PetscScalar  F = 0, F0 = 0, Gp;
292   Vec          G, SgF;
293   DM           dm, dmsave;
294 
295   PetscFunctionBegin;
296   PetscCall(SNESGetDM(snes, &dm));
297 
298   PetscCall(VecDuplicate(y, &Xp));
299   PetscCall(VecDuplicate(y, &Xdiff));
300   PetscCall(VecDuplicate(y, &SgF));
301   PetscCall(VecDuplicate(y, &G));
302 
303   PetscCall(VecGetLocalSize(y, &n));
304   PetscCall(MatCreate(PETSC_COMM_WORLD, &S));
305   PetscCall(MatSetSizes(S, PETSC_DECIDE, PETSC_DECIDE, n, n));
306   PetscCall(MatSetFromOptions(S));
307   PetscCall(MatSetUp(S));
308   PetscCall(MatAssemblyBegin(S, MAT_FINAL_ASSEMBLY));
309   PetscCall(MatAssemblyEnd(S, MAT_FINAL_ASSEMBLY));
310 
311   PetscCall(TSDiscGradGetX0AndXdot(ts, dm, &X0, &Xdot));
312   PetscCall(VecAXPBYPCZ(Xdot, -shift, shift, 0, X0, x)); /* Xdot = shift (x - X0) */
313 
314   PetscCall(VecAXPBYPCZ(Xp, -1, 2, 0, X0, x));     /* Xp = 2*x - X0 + (0)*Xmid */
315   PetscCall(VecAXPBYPCZ(Xdiff, -1, 1, 0, X0, Xp)); /* Xdiff = xp - X0 + (0)*Xdiff */
316 
317   if (dg->gonzalez) {
318     PetscCall((*dg->Sfunc)(ts, dg->stage_time, x, S, dg->funcCtx));
319     PetscCall((*dg->Ffunc)(ts, dg->stage_time, Xp, &F, dg->funcCtx));
320     PetscCall((*dg->Ffunc)(ts, dg->stage_time, X0, &F0, dg->funcCtx));
321     PetscCall((*dg->Gfunc)(ts, dg->stage_time, x, G, dg->funcCtx));
322 
323     /* Adding Extra Gonzalez Term */
324     PetscCall(VecDot(Xdiff, G, &Gp));
325     PetscCall(VecNorm(Xdiff, NORM_2, &norm));
326     if (norm < PETSC_SQRT_MACHINE_EPSILON) {
327       Gp = 0;
328     } else {
329       /* Gp = (1/|xn+1 - xn|^2) * (F(xn+1) - F(xn) - Gp) */
330       Gp = (F - F0 - Gp) / PetscSqr(norm);
331     }
332     PetscCall(VecAXPY(G, Gp, Xdiff));
333     PetscCall(MatMult(S, G, SgF)); /* S*gradF */
334 
335   } else {
336     PetscCall((*dg->Sfunc)(ts, dg->stage_time, x, S, dg->funcCtx));
337     PetscCall((*dg->Gfunc)(ts, dg->stage_time, x, G, dg->funcCtx));
338 
339     PetscCall(MatMult(S, G, SgF)); /* Xdot = S*gradF */
340   }
341   /* DM monkey-business allows user code to call TSGetDM() inside of functions evaluated on levels of FAS */
342   dmsave = ts->dm;
343   ts->dm = dm;
344   PetscCall(VecAXPBYPCZ(y, 1, -1, 0, Xdot, SgF));
345   ts->dm = dmsave;
346   PetscCall(TSDiscGradRestoreX0AndXdot(ts, dm, &X0, &Xdot));
347 
348   PetscCall(VecDestroy(&Xp));
349   PetscCall(VecDestroy(&Xdiff));
350   PetscCall(VecDestroy(&SgF));
351   PetscCall(VecDestroy(&G));
352   PetscCall(MatDestroy(&S));
353   PetscFunctionReturn(PETSC_SUCCESS);
354 }
355 
356 static PetscErrorCode SNESTSFormJacobian_DiscGrad(SNES snes, Vec x, Mat A, Mat B, TS ts)
357 {
358   TS_DiscGrad *dg    = (TS_DiscGrad *)ts->data;
359   PetscReal    shift = 1 / (0.5 * ts->time_step);
360   Vec          Xdot;
361   DM           dm, dmsave;
362 
363   PetscFunctionBegin;
364   PetscCall(SNESGetDM(snes, &dm));
365   /* Xdot has already been computed in SNESTSFormFunction_DiscGrad (SNES guarantees this) */
366   PetscCall(TSDiscGradGetX0AndXdot(ts, dm, NULL, &Xdot));
367 
368   dmsave = ts->dm;
369   ts->dm = dm;
370   PetscCall(TSComputeIJacobian(ts, dg->stage_time, x, Xdot, shift, A, B, PETSC_FALSE));
371   ts->dm = dmsave;
372   PetscCall(TSDiscGradRestoreX0AndXdot(ts, dm, NULL, &Xdot));
373   PetscFunctionReturn(PETSC_SUCCESS);
374 }
375 
376 static PetscErrorCode TSDiscGradGetFormulation_DiscGrad(TS ts, PetscErrorCode (**Sfunc)(TS, PetscReal, Vec, Mat, void *), PetscErrorCode (**Ffunc)(TS, PetscReal, Vec, PetscScalar *, void *), PetscErrorCode (**Gfunc)(TS, PetscReal, Vec, Vec, void *), void *ctx)
377 {
378   TS_DiscGrad *dg = (TS_DiscGrad *)ts->data;
379 
380   PetscFunctionBegin;
381   *Sfunc = dg->Sfunc;
382   *Ffunc = dg->Ffunc;
383   *Gfunc = dg->Gfunc;
384   PetscFunctionReturn(PETSC_SUCCESS);
385 }
386 
387 static PetscErrorCode TSDiscGradSetFormulation_DiscGrad(TS ts, PetscErrorCode (*Sfunc)(TS, PetscReal, Vec, Mat, void *), PetscErrorCode (*Ffunc)(TS, PetscReal, Vec, PetscScalar *, void *), PetscErrorCode (*Gfunc)(TS, PetscReal, Vec, Vec, void *), void *ctx)
388 {
389   TS_DiscGrad *dg = (TS_DiscGrad *)ts->data;
390 
391   PetscFunctionBegin;
392   dg->Sfunc   = Sfunc;
393   dg->Ffunc   = Ffunc;
394   dg->Gfunc   = Gfunc;
395   dg->funcCtx = ctx;
396   PetscFunctionReturn(PETSC_SUCCESS);
397 }
398 
399 /*MC
400   TSDISCGRAD - ODE solver using the discrete gradients version of the implicit midpoint method
401 
402   Level: intermediate
403 
404   Notes:
405   This is the implicit midpoint rule, with an optional term that guarantees the discrete
406   gradient property. This timestepper applies to systems of the form $u_t = S(u) \nabla F(u)$
407   where $S(u)$ is a linear operator, and $F$ is a functional of $u$.
408 
409 .seealso: [](ch_ts), `TSCreate()`, `TSSetType()`, `TS`, `TSDISCGRAD`, `TSDiscGradSetFormulation()`
410 M*/
411 PETSC_EXTERN PetscErrorCode TSCreate_DiscGrad(TS ts)
412 {
413   TS_DiscGrad *th;
414 
415   PetscFunctionBegin;
416   PetscCall(PetscCitationsRegister(DGCitation, &DGCite));
417   ts->ops->reset          = TSReset_DiscGrad;
418   ts->ops->destroy        = TSDestroy_DiscGrad;
419   ts->ops->view           = TSView_DiscGrad;
420   ts->ops->setfromoptions = TSSetFromOptions_DiscGrad;
421   ts->ops->setup          = TSSetUp_DiscGrad;
422   ts->ops->step           = TSStep_DiscGrad;
423   ts->ops->interpolate    = TSInterpolate_DiscGrad;
424   ts->ops->getstages      = TSGetStages_DiscGrad;
425   ts->ops->snesfunction   = SNESTSFormFunction_DiscGrad;
426   ts->ops->snesjacobian   = SNESTSFormJacobian_DiscGrad;
427   ts->default_adapt_type  = TSADAPTNONE;
428 
429   ts->usessnes = PETSC_TRUE;
430 
431   PetscCall(PetscNew(&th));
432   ts->data = (void *)th;
433 
434   th->gonzalez = PETSC_FALSE;
435 
436   PetscCall(PetscObjectComposeFunction((PetscObject)ts, "TSDiscGradGetFormulation_C", TSDiscGradGetFormulation_DiscGrad));
437   PetscCall(PetscObjectComposeFunction((PetscObject)ts, "TSDiscGradSetFormulation_C", TSDiscGradSetFormulation_DiscGrad));
438   PetscCall(PetscObjectComposeFunction((PetscObject)ts, "TSDiscGradIsGonzalez_C", TSDiscGradIsGonzalez_DiscGrad));
439   PetscCall(PetscObjectComposeFunction((PetscObject)ts, "TSDiscGradUseGonzalez_C", TSDiscGradUseGonzalez_DiscGrad));
440   PetscFunctionReturn(PETSC_SUCCESS);
441 }
442 
443 /*@C
444   TSDiscGradGetFormulation - Get the construction method for S, F, and grad F from the
445   formulation $u_t = S \nabla F$ for `TSDISCGRAD`
446 
447   Not Collective
448 
449   Input Parameter:
450 . ts - timestepping context
451 
452   Output Parameters:
453 + Sfunc - constructor for the S matrix from the formulation
454 . Ffunc - functional F from the formulation
455 . Gfunc - constructor for the gradient of F from the formulation
456 - ctx   - the user context
457 
458   Calling sequence of `Sfunc`:
459 + ts   - the integrator
460 . time - the current time
461 . u    - the solution
462 . S    - the S-matrix from the formulation
463 - ctx  - the user context
464 
465   Calling sequence of `Ffunc`:
466 + ts   - the integrator
467 . time - the current time
468 . u    - the solution
469 . F    - the computed function from the formulation
470 - ctx  - the user context
471 
472   Calling sequence of `Gfunc`:
473 + ts   - the integrator
474 . time - the current time
475 . u    - the solution
476 . G    - the gradient of the computed function from the formulation
477 - ctx  - the user context
478 
479   Level: intermediate
480 
481 .seealso: [](ch_ts), `TS`, `TSDISCGRAD`, `TSDiscGradSetFormulation()`
482 @*/
483 PetscErrorCode TSDiscGradGetFormulation(TS ts, PetscErrorCode (**Sfunc)(TS ts, PetscReal time, Vec u, Mat S, void *ctx), PetscErrorCode (**Ffunc)(TS ts, PetscReal time, Vec u, PetscScalar *F, void *ctx), PetscErrorCode (**Gfunc)(TS ts, PetscReal time, Vec u, Vec G, void *ctx), void *ctx)
484 {
485   PetscFunctionBegin;
486   PetscValidHeaderSpecific(ts, TS_CLASSID, 1);
487   PetscAssertPointer(Sfunc, 2);
488   PetscAssertPointer(Ffunc, 3);
489   PetscAssertPointer(Gfunc, 4);
490   PetscUseMethod(ts, "TSDiscGradGetFormulation_C", (TS, PetscErrorCode (**Sfunc)(TS, PetscReal, Vec, Mat, void *), PetscErrorCode (**Ffunc)(TS, PetscReal, Vec, PetscScalar *, void *), PetscErrorCode (**Gfunc)(TS, PetscReal, Vec, Vec, void *), void *), (ts, Sfunc, Ffunc, Gfunc, ctx));
491   PetscFunctionReturn(PETSC_SUCCESS);
492 }
493 
494 /*@C
495   TSDiscGradSetFormulation - Set the construction method for S, F, and grad F from the
496   formulation $u_t = S(u) \nabla F(u)$ for `TSDISCGRAD`
497 
498   Not Collective
499 
500   Input Parameters:
501 + ts    - timestepping context
502 . Sfunc - constructor for the S matrix from the formulation
503 . Ffunc - functional F from the formulation
504 . Gfunc - constructor for the gradient of F from the formulation
505 - ctx   - optional context for the functions
506 
507   Calling sequence of `Sfunc`:
508 + ts   - the integrator
509 . time - the current time
510 . u    - the solution
511 . S    - the S-matrix from the formulation
512 - ctx  - the user context
513 
514   Calling sequence of `Ffunc`:
515 + ts   - the integrator
516 . time - the current time
517 . u    - the solution
518 . F    - the computed function from the formulation
519 - ctx  - the user context
520 
521   Calling sequence of `Gfunc`:
522 + ts   - the integrator
523 . time - the current time
524 . u    - the solution
525 . G    - the gradient of the computed function from the formulation
526 - ctx  - the user context
527 
528   Level: intermediate
529 
530 .seealso: [](ch_ts), `TSDISCGRAD`, `TSDiscGradGetFormulation()`
531 @*/
532 PetscErrorCode TSDiscGradSetFormulation(TS ts, PetscErrorCode (*Sfunc)(TS ts, PetscReal time, Vec u, Mat S, void *ctx), PetscErrorCode (*Ffunc)(TS ts, PetscReal time, Vec u, PetscScalar *F, void *ctx), PetscErrorCode (*Gfunc)(TS ts, PetscReal time, Vec u, Vec G, void *ctx), void *ctx)
533 {
534   PetscFunctionBegin;
535   PetscValidHeaderSpecific(ts, TS_CLASSID, 1);
536   PetscValidFunction(Sfunc, 2);
537   PetscValidFunction(Ffunc, 3);
538   PetscValidFunction(Gfunc, 4);
539   PetscTryMethod(ts, "TSDiscGradSetFormulation_C", (TS, PetscErrorCode (*Sfunc)(TS, PetscReal, Vec, Mat, void *), PetscErrorCode (*Ffunc)(TS, PetscReal, Vec, PetscScalar *, void *), PetscErrorCode (*Gfunc)(TS, PetscReal, Vec, Vec, void *), void *), (ts, Sfunc, Ffunc, Gfunc, ctx));
540   PetscFunctionReturn(PETSC_SUCCESS);
541 }
542 
543 /*@
544   TSDiscGradIsGonzalez - Checks flag for whether to use additional conservative terms in
545   discrete gradient formulation for `TSDISCGRAD`
546 
547   Not Collective
548 
549   Input Parameter:
550 . ts - timestepping context
551 
552   Output Parameter:
553 . gonzalez - `PETSC_TRUE` when using the Gonzalez term
554 
555   Level: advanced
556 
557 .seealso: [](ch_ts), `TSDISCGRAD`, `TSDiscGradUseGonzalez()`
558 @*/
559 PetscErrorCode TSDiscGradIsGonzalez(TS ts, PetscBool *gonzalez)
560 {
561   PetscFunctionBegin;
562   PetscValidHeaderSpecific(ts, TS_CLASSID, 1);
563   PetscAssertPointer(gonzalez, 2);
564   PetscUseMethod(ts, "TSDiscGradIsGonzalez_C", (TS, PetscBool *), (ts, gonzalez));
565   PetscFunctionReturn(PETSC_SUCCESS);
566 }
567 
568 /*@
569   TSDiscGradUseGonzalez - Sets discrete gradient formulation with or without additional
570   conservative terms.
571 
572   Not Collective
573 
574   Input Parameters:
575 + ts  - timestepping context
576 - flg - `PETSC_TRUE` to use the Gonzalez term
577 
578   Options Database Key:
579 . -ts_discgrad_gonzalez <flg> - use the Gonzalez term for the discrete gradient formulation
580 
581   Level: intermediate
582 
583   Notes:
584   Without `flg`, the discrete gradients timestepper is just backwards Euler.
585 
586 .seealso: [](ch_ts), `TSDISCGRAD`
587 @*/
588 PetscErrorCode TSDiscGradUseGonzalez(TS ts, PetscBool flg)
589 {
590   PetscFunctionBegin;
591   PetscValidHeaderSpecific(ts, TS_CLASSID, 1);
592   PetscTryMethod(ts, "TSDiscGradUseGonzalez_C", (TS, PetscBool), (ts, flg));
593   PetscFunctionReturn(PETSC_SUCCESS);
594 }
595