1 /* 2 Code for timestepping with Rosenbrock W methods 3 4 Notes: 5 The general system is written as 6 7 G(t,X,Xdot) = F(t,X) 8 9 where G represents the stiff part of the physics and F represents the non-stiff part. 10 This method is designed to be linearly implicit on G and can use an approximate and lagged Jacobian. 11 12 */ 13 #include <petsc-private/tsimpl.h> /*I "petscts.h" I*/ 14 15 #include <../src/mat/blockinvert.h> 16 17 static const TSRosWType TSRosWDefault = TSROSWRA34PW2; 18 static PetscBool TSRosWRegisterAllCalled; 19 static PetscBool TSRosWPackageInitialized; 20 21 typedef struct _RosWTableau *RosWTableau; 22 struct _RosWTableau { 23 char *name; 24 PetscInt order; /* Classical approximation order of the method */ 25 PetscInt s; /* Number of stages */ 26 PetscInt pinterp; /* Interpolation order */ 27 PetscReal *A; /* Propagation table, strictly lower triangular */ 28 PetscReal *Gamma; /* Stage table, lower triangular with nonzero diagonal */ 29 PetscBool *GammaZeroDiag; /* Diagonal entries that are zero in stage table Gamma, vector indicating explicit statages */ 30 PetscReal *GammaExplicitCorr; /* Coefficients for correction terms needed for explicit stages in transformed variables*/ 31 PetscReal *b; /* Step completion table */ 32 PetscReal *bembed; /* Step completion table for embedded method of order one less */ 33 PetscReal *ASum; /* Row sum of A */ 34 PetscReal *GammaSum; /* Row sum of Gamma, only needed for non-autonomous systems */ 35 PetscReal *At; /* Propagation table in transformed variables */ 36 PetscReal *bt; /* Step completion table in transformed variables */ 37 PetscReal *bembedt; /* Step completion table of order one less in transformed variables */ 38 PetscReal *GammaInv; /* Inverse of Gamma, used for transformed variables */ 39 PetscReal ccfl; /* Placeholder for CFL coefficient relative to forward Euler */ 40 PetscReal *binterpt; /* Dense output formula */ 41 }; 42 typedef struct _RosWTableauLink *RosWTableauLink; 43 struct _RosWTableauLink { 44 struct _RosWTableau tab; 45 RosWTableauLink next; 46 }; 47 static RosWTableauLink RosWTableauList; 48 49 typedef struct { 50 RosWTableau tableau; 51 Vec *Y; /* States computed during the step, used to complete the step */ 52 Vec Ydot; /* Work vector holding Ydot during residual evaluation */ 53 Vec Ystage; /* Work vector for the state value at each stage */ 54 Vec Zdot; /* Ydot = Zdot + shift*Y */ 55 Vec Zstage; /* Y = Zstage + Y */ 56 Vec VecSolPrev; /* Work vector holding the solution from the previous step (used for interpolation)*/ 57 PetscScalar *work; /* Scalar work space of length number of stages, used to prepare VecMAXPY() */ 58 PetscReal shift; 59 PetscReal stage_time; 60 PetscReal stage_explicit; /* Flag indicates that the current stage is explicit */ 61 PetscBool recompute_jacobian; /* Recompute the Jacobian at each stage, default is to freeze the Jacobian at the start of each step */ 62 TSStepStatus status; 63 } TS_RosW; 64 65 /*MC 66 TSROSWTHETA1 - One stage first order L-stable Rosenbrock-W scheme (aka theta method). 67 68 Only an approximate Jacobian is needed. 69 70 Level: intermediate 71 72 .seealso: TSROSW 73 M*/ 74 75 /*MC 76 TSROSWTHETA2 - One stage second order A-stable Rosenbrock-W scheme (aka theta method). 77 78 Only an approximate Jacobian is needed. 79 80 Level: intermediate 81 82 .seealso: TSROSW 83 M*/ 84 85 /*MC 86 TSROSW2M - Two stage second order L-stable Rosenbrock-W scheme. 87 88 Only an approximate Jacobian is needed. By default, it is only recomputed once per step. This method is a reflection of TSROSW2P. 89 90 Level: intermediate 91 92 .seealso: TSROSW 93 M*/ 94 95 /*MC 96 TSROSW2P - Two stage second order L-stable Rosenbrock-W scheme. 97 98 Only an approximate Jacobian is needed. By default, it is only recomputed once per step. This method is a reflection of TSROSW2M. 99 100 Level: intermediate 101 102 .seealso: TSROSW 103 M*/ 104 105 /*MC 106 TSROSWRA3PW - Three stage third order Rosenbrock-W scheme for PDAE of index 1. 107 108 Only an approximate Jacobian is needed. By default, it is only recomputed once per step. 109 110 This is strongly A-stable with R(infty) = 0.73. The embedded method of order 2 is strongly A-stable with R(infty) = 0.73. 111 112 References: 113 Rang and Angermann, New Rosenbrock-W methods of order 3 for partial differential algebraic equations of index 1, 2005. 114 115 Level: intermediate 116 117 .seealso: TSROSW 118 M*/ 119 120 /*MC 121 TSROSWRA34PW2 - Four stage third order L-stable Rosenbrock-W scheme for PDAE of index 1. 122 123 Only an approximate Jacobian is needed. By default, it is only recomputed once per step. 124 125 This is strongly A-stable with R(infty) = 0. The embedded method of order 2 is strongly A-stable with R(infty) = 0.48. 126 127 References: 128 Rang and Angermann, New Rosenbrock-W methods of order 3 for partial differential algebraic equations of index 1, 2005. 129 130 Level: intermediate 131 132 .seealso: TSROSW 133 M*/ 134 135 /*MC 136 TSROSWRODAS3 - Four stage third order L-stable Rosenbrock scheme 137 138 By default, the Jacobian is only recomputed once per step. 139 140 Both the third order and embedded second order methods are stiffly accurate and L-stable. 141 142 References: 143 Sandu et al, Benchmarking stiff ODE solvers for atmospheric chemistry problems II, Rosenbrock solvers, 1997. 144 145 Level: intermediate 146 147 .seealso: TSROSW, TSROSWSANDU3 148 M*/ 149 150 /*MC 151 TSROSWSANDU3 - Three stage third order L-stable Rosenbrock scheme 152 153 By default, the Jacobian is only recomputed once per step. 154 155 The third order method is L-stable, but not stiffly accurate. 156 The second order embedded method is strongly A-stable with R(infty) = 0.5. 157 The internal stages are L-stable. 158 This method is called ROS3 in the paper. 159 160 References: 161 Sandu et al, Benchmarking stiff ODE solvers for atmospheric chemistry problems II, Rosenbrock solvers, 1997. 162 163 Level: intermediate 164 165 .seealso: TSROSW, TSROSWRODAS3 166 M*/ 167 168 /*MC 169 TSROSWASSP3P3S1C - A-stable Rosenbrock-W method with SSP explicit part, third order, three stages 170 171 By default, the Jacobian is only recomputed once per step. 172 173 A-stable SPP explicit order 3, 3 stages, CFL 1 (eff = 1/3) 174 175 References: 176 Emil Constantinescu 177 178 Level: intermediate 179 180 .seealso: TSROSW, TSROSWLASSP3P4S2C, TSROSWLLSSP3P4S2C, SSP 181 M*/ 182 183 /*MC 184 TSROSWLASSP3P4S2C - L-stable Rosenbrock-W method with SSP explicit part, third order, four stages 185 186 By default, the Jacobian is only recomputed once per step. 187 188 L-stable (A-stable embedded) SPP explicit order 3, 4 stages, CFL 2 (eff = 1/2) 189 190 References: 191 Emil Constantinescu 192 193 Level: intermediate 194 195 .seealso: TSROSW, TSROSWASSP3P3S1C, TSROSWLLSSP3P4S2C, TSSSP 196 M*/ 197 198 /*MC 199 TSROSWLLSSP3P4S2C - L-stable Rosenbrock-W method with SSP explicit part, third order, four stages 200 201 By default, the Jacobian is only recomputed once per step. 202 203 L-stable (L-stable embedded) SPP explicit order 3, 4 stages, CFL 2 (eff = 1/2) 204 205 References: 206 Emil Constantinescu 207 208 Level: intermediate 209 210 .seealso: TSROSW, TSROSWASSP3P3S1C, TSROSWLASSP3P4S2C, TSSSP 211 M*/ 212 213 /*MC 214 TSROSWGRK4T - four stage, fourth order Rosenbrock (not W) method from Kaps and Rentrop 215 216 By default, the Jacobian is only recomputed once per step. 217 218 A(89.3 degrees)-stable, |R(infty)| = 0.454. 219 220 This method does not provide a dense output formula. 221 222 References: 223 Kaps and Rentrop, Generalized Runge-Kutta methods of order four with stepsize control for stiff ordinary differential equations, 1979. 224 225 Hairer and Wanner, Solving Ordinary Differential Equations II, Section 4 Table 7.2. 226 227 Hairer's code ros4.f 228 229 Level: intermediate 230 231 .seealso: TSROSW, TSROSWSHAMP4, TSROSWVELDD4, TSROSW4L 232 M*/ 233 234 /*MC 235 TSROSWSHAMP4 - four stage, fourth order Rosenbrock (not W) method from Shampine 236 237 By default, the Jacobian is only recomputed once per step. 238 239 A-stable, |R(infty)| = 1/3. 240 241 This method does not provide a dense output formula. 242 243 References: 244 Shampine, Implementation of Rosenbrock methods, 1982. 245 246 Hairer and Wanner, Solving Ordinary Differential Equations II, Section 4 Table 7.2. 247 248 Hairer's code ros4.f 249 250 Level: intermediate 251 252 .seealso: TSROSW, TSROSWGRK4T, TSROSWVELDD4, TSROSW4L 253 M*/ 254 255 /*MC 256 TSROSWVELDD4 - four stage, fourth order Rosenbrock (not W) method from van Veldhuizen 257 258 By default, the Jacobian is only recomputed once per step. 259 260 A(89.5 degrees)-stable, |R(infty)| = 0.24. 261 262 This method does not provide a dense output formula. 263 264 References: 265 van Veldhuizen, D-stability and Kaps-Rentrop methods, 1984. 266 267 Hairer and Wanner, Solving Ordinary Differential Equations II, Section 4 Table 7.2. 268 269 Hairer's code ros4.f 270 271 Level: intermediate 272 273 .seealso: TSROSW, TSROSWGRK4T, TSROSWSHAMP4, TSROSW4L 274 M*/ 275 276 /*MC 277 TSROSW4L - four stage, fourth order Rosenbrock (not W) method 278 279 By default, the Jacobian is only recomputed once per step. 280 281 A-stable and L-stable 282 283 This method does not provide a dense output formula. 284 285 References: 286 Hairer and Wanner, Solving Ordinary Differential Equations II, Section 4 Table 7.2. 287 288 Hairer's code ros4.f 289 290 Level: intermediate 291 292 .seealso: TSROSW, TSROSWGRK4T, TSROSWSHAMP4, TSROSW4L 293 M*/ 294 295 #undef __FUNCT__ 296 #define __FUNCT__ "TSRosWRegisterAll" 297 /*@C 298 TSRosWRegisterAll - Registers all of the additive Runge-Kutta implicit-explicit methods in TSRosW 299 300 Not Collective, but should be called by all processes which will need the schemes to be registered 301 302 Level: advanced 303 304 .keywords: TS, TSRosW, register, all 305 306 .seealso: TSRosWRegisterDestroy() 307 @*/ 308 PetscErrorCode TSRosWRegisterAll(void) 309 { 310 PetscErrorCode ierr; 311 312 PetscFunctionBegin; 313 if (TSRosWRegisterAllCalled) PetscFunctionReturn(0); 314 TSRosWRegisterAllCalled = PETSC_TRUE; 315 316 { 317 const PetscReal 318 A = 0, 319 Gamma = 1, 320 b = 1, 321 binterpt=1; 322 323 ierr = TSRosWRegister(TSROSWTHETA1,1,1,&A,&Gamma,&b,PETSC_NULL,1,&binterpt);CHKERRQ(ierr); 324 } 325 326 { 327 const PetscReal 328 A= 0, 329 Gamma = 0.5, 330 b = 1, 331 binterpt=1; 332 ierr = TSRosWRegister(TSROSWTHETA2,2,1,&A,&Gamma,&b,PETSC_NULL,1,&binterpt);CHKERRQ(ierr); 333 } 334 335 { 336 const PetscReal g = 1. + 1./PetscSqrtReal(2.0); 337 const PetscReal 338 A[2][2] = {{0,0}, {1.,0}}, 339 Gamma[2][2] = {{g,0}, {-2.*g,g}}, 340 b[2] = {0.5,0.5}, 341 b1[2] = {1.0,0.0}; 342 PetscReal binterpt[2][2]; 343 binterpt[0][0]=g-1.0; 344 binterpt[1][0]=2.0-g; 345 binterpt[0][1]=g-1.5; 346 binterpt[1][1]=1.5-g; 347 ierr = TSRosWRegister(TSROSW2P,2,2,&A[0][0],&Gamma[0][0],b,b1,2,&binterpt[0][0]);CHKERRQ(ierr); 348 } 349 { 350 const PetscReal g = 1. - 1./PetscSqrtReal(2.0); 351 const PetscReal 352 A[2][2] = {{0,0}, {1.,0}}, 353 Gamma[2][2] = {{g,0}, {-2.*g,g}}, 354 b[2] = {0.5,0.5}, 355 b1[2] = {1.0,0.0}; 356 PetscReal binterpt[2][2]; 357 binterpt[0][0]=g-1.0; 358 binterpt[1][0]=2.0-g; 359 binterpt[0][1]=g-1.5; 360 binterpt[1][1]=1.5-g; 361 ierr = TSRosWRegister(TSROSW2M,2,2,&A[0][0],&Gamma[0][0],b,b1,2,&binterpt[0][0]);CHKERRQ(ierr); 362 } 363 { 364 const PetscReal g = 7.8867513459481287e-01; 365 PetscReal binterpt[3][2]; 366 const PetscReal 367 A[3][3] = {{0,0,0}, 368 {1.5773502691896257e+00,0,0}, 369 {0.5,0,0}}, 370 Gamma[3][3] = {{g,0,0}, 371 {-1.5773502691896257e+00,g,0}, 372 {-6.7075317547305480e-01,-1.7075317547305482e-01,g}}, 373 b[3] = {1.0566243270259355e-01,4.9038105676657971e-02,8.4529946162074843e-01}, 374 b2[3] = {-1.7863279495408180e-01,1./3.,8.4529946162074843e-01}; 375 376 binterpt[0][0]=-0.8094010767585034; 377 binterpt[1][0]=-0.5; 378 binterpt[2][0]=2.3094010767585034; 379 binterpt[0][1]=0.9641016151377548; 380 binterpt[1][1]=0.5; 381 binterpt[2][1]=-1.4641016151377548; 382 ierr = TSRosWRegister(TSROSWRA3PW,3,3,&A[0][0],&Gamma[0][0],b,b2,2,&binterpt[0][0]);CHKERRQ(ierr); 383 } 384 { 385 PetscReal binterpt[4][3]; 386 const PetscReal g = 4.3586652150845900e-01; 387 const PetscReal 388 A[4][4] = {{0,0,0,0}, 389 {8.7173304301691801e-01,0,0,0}, 390 {8.4457060015369423e-01,-1.1299064236484185e-01,0,0}, 391 {0,0,1.,0}}, 392 Gamma[4][4] = {{g,0,0,0}, 393 {-8.7173304301691801e-01,g,0,0}, 394 {-9.0338057013044082e-01,5.4180672388095326e-02,g,0}, 395 {2.4212380706095346e-01,-1.2232505839045147e+00,5.4526025533510214e-01,g}}, 396 b[4] = {2.4212380706095346e-01,-1.2232505839045147e+00,1.5452602553351020e+00,4.3586652150845900e-01}, 397 b2[4] = {3.7810903145819369e-01,-9.6042292212423178e-02,5.0000000000000000e-01,2.1793326075422950e-01}; 398 399 binterpt[0][0]=1.0564298455794094; 400 binterpt[1][0]=2.296429974281067; 401 binterpt[2][0]=-1.307599564525376; 402 binterpt[3][0]=-1.045260255335102; 403 binterpt[0][1]=-1.3864882699759573; 404 binterpt[1][1]=-8.262611700275677; 405 binterpt[2][1]=7.250979895056055; 406 binterpt[3][1]=2.398120075195581; 407 binterpt[0][2]=0.5721822314575016; 408 binterpt[1][2]=4.742931142090097; 409 binterpt[2][2]=-4.398120075195578; 410 binterpt[3][2]=-0.9169932983520199; 411 412 ierr = TSRosWRegister(TSROSWRA34PW2,3,4,&A[0][0],&Gamma[0][0],b,b2,3,&binterpt[0][0]);CHKERRQ(ierr); 413 } 414 { 415 const PetscReal g = 0.5; 416 const PetscReal 417 A[4][4] = {{0,0,0,0}, 418 {0,0,0,0}, 419 {1.,0,0,0}, 420 {0.75,-0.25,0.5,0}}, 421 Gamma[4][4] = {{g,0,0,0}, 422 {1.,g,0,0}, 423 {-0.25,-0.25,g,0}, 424 {1./12,1./12,-2./3,g}}, 425 b[4] = {5./6,-1./6,-1./6,0.5}, 426 b2[4] = {0.75,-0.25,0.5,0}; 427 ierr = TSRosWRegister(TSROSWRODAS3,3,4,&A[0][0],&Gamma[0][0],b,b2,0,PETSC_NULL);CHKERRQ(ierr); 428 } 429 { 430 const PetscReal g = 0.43586652150845899941601945119356; 431 const PetscReal 432 A[3][3] = {{0,0,0}, 433 {g,0,0}, 434 {g,0,0}}, 435 Gamma[3][3] = {{g,0,0}, 436 {-0.19294655696029095575009695436041,g,0}, 437 {0,1.74927148125794685173529749738960,g}}, 438 b[3] = {-0.75457412385404315829818998646589,1.94100407061964420292840123379419,-0.18642994676560104463021124732829}, 439 b2[3] = {-1.53358745784149585370766523913002,2.81745131148625772213931745457622,-0.28386385364476186843165221544619}; 440 441 PetscReal binterpt[3][2]; 442 binterpt[0][0]=3.793692883777660870425141387941; 443 binterpt[1][0]=-2.918692883777660870425141387941; 444 binterpt[2][0]=0.125; 445 binterpt[0][1]=-0.725741064379812106687651020584; 446 binterpt[1][1]=0.559074397713145440020984353917; 447 binterpt[2][1]=0.16666666666666666666666666666667; 448 449 ierr = TSRosWRegister(TSROSWSANDU3,3,3,&A[0][0],&Gamma[0][0],b,b2,2,&binterpt[0][0]);CHKERRQ(ierr); 450 } 451 { 452 const PetscReal s3 = PetscSqrtReal(3.),g = (3.0+s3)/6.0; 453 const PetscReal 454 A[3][3] = {{0,0,0}, 455 {1,0,0}, 456 {0.25,0.25,0}}, 457 Gamma[3][3] = {{0,0,0}, 458 {(-3.0-s3)/6.0,g,0}, 459 {(-3.0-s3)/24.0,(-3.0-s3)/8.0,g}}, 460 b[3] = {1./6.,1./6.,2./3.}, 461 b2[3] = {1./4.,1./4.,1./2.}; 462 463 PetscReal binterpt[3][2]; 464 binterpt[0][0]=0.089316397477040902157517886164709; 465 binterpt[1][0]=-0.91068360252295909784248211383529; 466 binterpt[2][0]=1.8213672050459181956849642276706; 467 binterpt[0][1]=0.077350269189625764509148780501957; 468 binterpt[1][1]=1.077350269189625764509148780502; 469 binterpt[2][1]=-1.1547005383792515290182975610039; 470 ierr = TSRosWRegister(TSROSWASSP3P3S1C,3,3,&A[0][0],&Gamma[0][0],b,b2,2,&binterpt[0][0]);CHKERRQ(ierr); 471 } 472 473 { 474 const PetscReal 475 A[4][4] = {{0,0,0,0}, 476 {1./2.,0,0,0}, 477 {1./2.,1./2.,0,0}, 478 {1./6.,1./6.,1./6.,0}}, 479 Gamma[4][4] = {{1./2.,0,0,0}, 480 {0.0,1./4.,0,0}, 481 {-2.,-2./3.,2./3.,0}, 482 {1./2.,5./36.,-2./9,0}}, 483 b[4] = {1./6.,1./6.,1./6.,1./2.}, 484 b2[4] = {1./8.,3./4.,1./8.,0}; 485 PetscReal binterpt[4][3]; 486 binterpt[0][0]=6.25; 487 binterpt[1][0]=-30.25; 488 binterpt[2][0]=1.75; 489 binterpt[3][0]=23.25; 490 binterpt[0][1]=-9.75; 491 binterpt[1][1]=58.75; 492 binterpt[2][1]=-3.25; 493 binterpt[3][1]=-45.75; 494 binterpt[0][2]=3.6666666666666666666666666666667; 495 binterpt[1][2]=-28.333333333333333333333333333333; 496 binterpt[2][2]=1.6666666666666666666666666666667; 497 binterpt[3][2]=23.; 498 ierr = TSRosWRegister(TSROSWLASSP3P4S2C,3,4,&A[0][0],&Gamma[0][0],b,b2,3,&binterpt[0][0]);CHKERRQ(ierr); 499 } 500 501 { 502 const PetscReal 503 A[4][4] = {{0,0,0,0}, 504 {1./2.,0,0,0}, 505 {1./2.,1./2.,0,0}, 506 {1./6.,1./6.,1./6.,0}}, 507 Gamma[4][4] = {{1./2.,0,0,0}, 508 {0.0,3./4.,0,0}, 509 {-2./3.,-23./9.,2./9.,0}, 510 {1./18.,65./108.,-2./27,0}}, 511 b[4] = {1./6.,1./6.,1./6.,1./2.}, 512 b2[4] = {3./16.,10./16.,3./16.,0}; 513 514 PetscReal binterpt[4][3]; 515 binterpt[0][0]=1.6911764705882352941176470588235; 516 binterpt[1][0]=3.6813725490196078431372549019608; 517 binterpt[2][0]=0.23039215686274509803921568627451; 518 binterpt[3][0]=-4.6029411764705882352941176470588; 519 binterpt[0][1]=-0.95588235294117647058823529411765; 520 binterpt[1][1]=-6.2401960784313725490196078431373; 521 binterpt[2][1]=-0.31862745098039215686274509803922; 522 binterpt[3][1]=7.5147058823529411764705882352941; 523 binterpt[0][2]=-0.56862745098039215686274509803922; 524 binterpt[1][2]=2.7254901960784313725490196078431; 525 binterpt[2][2]=0.25490196078431372549019607843137; 526 binterpt[3][2]=-2.4117647058823529411764705882353; 527 ierr = TSRosWRegister(TSROSWLLSSP3P4S2C,3,4,&A[0][0],&Gamma[0][0],b,b2,3,&binterpt[0][0]);CHKERRQ(ierr); 528 } 529 530 { 531 PetscReal A[4][4],Gamma[4][4],b[4],b2[4]; 532 PetscReal binterpt[4][3]; 533 534 Gamma[0][0]=0.4358665215084589994160194475295062513822671686978816; 535 Gamma[0][1]=0; Gamma[0][2]=0; Gamma[0][3]=0; 536 Gamma[1][0]=-1.997527830934941248426324674704153457289527280554476; 537 Gamma[1][1]=0.4358665215084589994160194475295062513822671686978816; 538 Gamma[1][2]=0; Gamma[1][3]=0; 539 Gamma[2][0]=-1.007948511795029620852002345345404191008352770119903; 540 Gamma[2][1]=-0.004648958462629345562774289390054679806993396798458131; 541 Gamma[2][2]=0.4358665215084589994160194475295062513822671686978816; 542 Gamma[2][3]=0; 543 Gamma[3][0]=-0.6685429734233467180451604600279552604364311322650783; 544 Gamma[3][1]=0.6056625986449338476089525334450053439525178740492984; 545 Gamma[3][2]=-0.9717899277217721234705114616271378792182450260943198; 546 Gamma[3][3]=0; 547 548 A[0][0]=0; A[0][1]=0; A[0][2]=0; A[0][3]=0; 549 A[1][0]=0.8717330430169179988320388950590125027645343373957631; 550 A[1][1]=0; A[1][2]=0; A[1][3]=0; 551 A[2][0]=0.5275890119763004115618079766722914408876108660811028; 552 A[2][1]=0.07241098802369958843819203208518599088698057726988732; 553 A[2][2]=0; A[2][3]=0; 554 A[3][0]=0.3990960076760701320627260685975778145384666450351314; 555 A[3][1]=-0.4375576546135194437228463747348862825846903771419953; 556 A[3][2]=1.038461646937449311660120300601880176655352737312713; 557 A[3][3]=0; 558 559 b[0]=0.1876410243467238251612921333138006734899663569186926; 560 b[1]=-0.5952974735769549480478230473706443582188442040780541; 561 b[2]=0.9717899277217721234705114616271378792182450260943198; 562 b[3]=0.4358665215084589994160194475295062513822671686978816; 563 564 b2[0]=0.2147402862233891404862383521089097657790734483804460; 565 b2[1]=-0.4851622638849390928209050538171743017757490232519684; 566 b2[2]=0.8687250025203875511662123688667549217531982787600080; 567 b2[3]=0.4016969751411624011684543450940068201770721128357014; 568 569 binterpt[0][0]=2.2565812720167954547104627844105; 570 binterpt[1][0]=1.349166413351089573796243820819; 571 binterpt[2][0]=-2.4695174540533503758652847586647; 572 binterpt[3][0]=-0.13623023131453465264142184656474; 573 binterpt[0][1]=-3.0826699111559187902922463354557; 574 binterpt[1][1]=-2.4689115685996042534544925650515; 575 binterpt[2][1]=5.7428279814696677152129332773553; 576 binterpt[3][1]=-0.19124650171414467146619437684812; 577 binterpt[0][2]=1.0137296634858471607430756831148; 578 binterpt[1][2]=0.52444768167155973161042570784064; 579 binterpt[2][2]=-2.3015205996945452158771370439586; 580 binterpt[3][2]=0.76334325453713832352363565300308; 581 582 ierr = TSRosWRegister(TSROSWARK3,3,4,&A[0][0],&Gamma[0][0],b,b2,3,&binterpt[0][0]);CHKERRQ(ierr); 583 } 584 ierr = TSRosWRegisterRos4(TSROSWGRK4T,0.231,PETSC_DEFAULT,PETSC_DEFAULT,0,-0.1282612945269037e+01);CHKERRQ(ierr); 585 ierr = TSRosWRegisterRos4(TSROSWSHAMP4,0.5,PETSC_DEFAULT,PETSC_DEFAULT,0,125./108.);CHKERRQ(ierr); 586 ierr = TSRosWRegisterRos4(TSROSWVELDD4,0.22570811482256823492,PETSC_DEFAULT,PETSC_DEFAULT,0,-1.355958941201148);CHKERRQ(ierr); 587 ierr = TSRosWRegisterRos4(TSROSW4L,0.57282,PETSC_DEFAULT,PETSC_DEFAULT,0,-1.093502252409163);CHKERRQ(ierr); 588 PetscFunctionReturn(0); 589 } 590 591 592 593 #undef __FUNCT__ 594 #define __FUNCT__ "TSRosWRegisterDestroy" 595 /*@C 596 TSRosWRegisterDestroy - Frees the list of schemes that were registered by TSRosWRegister(). 597 598 Not Collective 599 600 Level: advanced 601 602 .keywords: TSRosW, register, destroy 603 .seealso: TSRosWRegister(), TSRosWRegisterAll(), TSRosWRegisterDynamic() 604 @*/ 605 PetscErrorCode TSRosWRegisterDestroy(void) 606 { 607 PetscErrorCode ierr; 608 RosWTableauLink link; 609 610 PetscFunctionBegin; 611 while ((link = RosWTableauList)) { 612 RosWTableau t = &link->tab; 613 RosWTableauList = link->next; 614 ierr = PetscFree5(t->A,t->Gamma,t->b,t->ASum,t->GammaSum);CHKERRQ(ierr); 615 ierr = PetscFree5(t->At,t->bt,t->GammaInv,t->GammaZeroDiag,t->GammaExplicitCorr);CHKERRQ(ierr); 616 ierr = PetscFree2(t->bembed,t->bembedt);CHKERRQ(ierr); 617 ierr = PetscFree(t->binterpt);CHKERRQ(ierr); 618 ierr = PetscFree(t->name);CHKERRQ(ierr); 619 ierr = PetscFree(link);CHKERRQ(ierr); 620 } 621 TSRosWRegisterAllCalled = PETSC_FALSE; 622 PetscFunctionReturn(0); 623 } 624 625 #undef __FUNCT__ 626 #define __FUNCT__ "TSRosWInitializePackage" 627 /*@C 628 TSRosWInitializePackage - This function initializes everything in the TSRosW package. It is called 629 from PetscDLLibraryRegister() when using dynamic libraries, and on the first call to TSCreate_RosW() 630 when using static libraries. 631 632 Input Parameter: 633 path - The dynamic library path, or PETSC_NULL 634 635 Level: developer 636 637 .keywords: TS, TSRosW, initialize, package 638 .seealso: PetscInitialize() 639 @*/ 640 PetscErrorCode TSRosWInitializePackage(const char path[]) 641 { 642 PetscErrorCode ierr; 643 644 PetscFunctionBegin; 645 if (TSRosWPackageInitialized) PetscFunctionReturn(0); 646 TSRosWPackageInitialized = PETSC_TRUE; 647 ierr = TSRosWRegisterAll();CHKERRQ(ierr); 648 ierr = PetscRegisterFinalize(TSRosWFinalizePackage);CHKERRQ(ierr); 649 PetscFunctionReturn(0); 650 } 651 652 #undef __FUNCT__ 653 #define __FUNCT__ "TSRosWFinalizePackage" 654 /*@C 655 TSRosWFinalizePackage - This function destroys everything in the TSRosW package. It is 656 called from PetscFinalize(). 657 658 Level: developer 659 660 .keywords: Petsc, destroy, package 661 .seealso: PetscFinalize() 662 @*/ 663 PetscErrorCode TSRosWFinalizePackage(void) 664 { 665 PetscErrorCode ierr; 666 667 PetscFunctionBegin; 668 TSRosWPackageInitialized = PETSC_FALSE; 669 ierr = TSRosWRegisterDestroy();CHKERRQ(ierr); 670 PetscFunctionReturn(0); 671 } 672 673 #undef __FUNCT__ 674 #define __FUNCT__ "TSRosWRegister" 675 /*@C 676 TSRosWRegister - register a Rosenbrock W scheme by providing the entries in the Butcher tableau and optionally embedded approximations and interpolation 677 678 Not Collective, but the same schemes should be registered on all processes on which they will be used 679 680 Input Parameters: 681 + name - identifier for method 682 . order - approximation order of method 683 . s - number of stages, this is the dimension of the matrices below 684 . A - Table of propagated stage coefficients (dimension s*s, row-major), strictly lower triangular 685 . Gamma - Table of coefficients in implicit stage equations (dimension s*s, row-major), lower triangular with nonzero diagonal 686 . b - Step completion table (dimension s) 687 . bembed - Step completion table for a scheme of order one less (dimension s, PETSC_NULL if no embedded scheme is available) 688 . pinterp - Order of the interpolation scheme, equal to the number of columns of binterpt 689 - binterpt - Coefficients of the interpolation formula (dimension s*pinterp) 690 691 Notes: 692 Several Rosenbrock W methods are provided, this function is only needed to create new methods. 693 694 Level: advanced 695 696 .keywords: TS, register 697 698 .seealso: TSRosW 699 @*/ 700 PetscErrorCode TSRosWRegister(const TSRosWType name,PetscInt order,PetscInt s, 701 const PetscReal A[],const PetscReal Gamma[],const PetscReal b[],const PetscReal bembed[], 702 PetscInt pinterp,const PetscReal binterpt[]) 703 { 704 PetscErrorCode ierr; 705 RosWTableauLink link; 706 RosWTableau t; 707 PetscInt i,j,k; 708 PetscScalar *GammaInv; 709 710 PetscFunctionBegin; 711 PetscValidCharPointer(name,1); 712 PetscValidPointer(A,4); 713 PetscValidPointer(Gamma,5); 714 PetscValidPointer(b,6); 715 if (bembed) PetscValidPointer(bembed,7); 716 717 ierr = PetscMalloc(sizeof(*link),&link);CHKERRQ(ierr); 718 ierr = PetscMemzero(link,sizeof(*link));CHKERRQ(ierr); 719 t = &link->tab; 720 ierr = PetscStrallocpy(name,&t->name);CHKERRQ(ierr); 721 t->order = order; 722 t->s = s; 723 ierr = PetscMalloc5(s*s,PetscReal,&t->A,s*s,PetscReal,&t->Gamma,s,PetscReal,&t->b,s,PetscReal,&t->ASum,s,PetscReal,&t->GammaSum);CHKERRQ(ierr); 724 ierr = PetscMalloc5(s*s,PetscReal,&t->At,s,PetscReal,&t->bt,s*s,PetscReal,&t->GammaInv,s,PetscBool,&t->GammaZeroDiag,s*s,PetscReal,&t->GammaExplicitCorr);CHKERRQ(ierr); 725 ierr = PetscMemcpy(t->A,A,s*s*sizeof(A[0]));CHKERRQ(ierr); 726 ierr = PetscMemcpy(t->Gamma,Gamma,s*s*sizeof(Gamma[0]));CHKERRQ(ierr); 727 ierr = PetscMemcpy(t->GammaExplicitCorr,Gamma,s*s*sizeof(Gamma[0]));CHKERRQ(ierr); 728 ierr = PetscMemcpy(t->b,b,s*sizeof(b[0]));CHKERRQ(ierr); 729 if (bembed) { 730 ierr = PetscMalloc2(s,PetscReal,&t->bembed,s,PetscReal,&t->bembedt);CHKERRQ(ierr); 731 ierr = PetscMemcpy(t->bembed,bembed,s*sizeof(bembed[0]));CHKERRQ(ierr); 732 } 733 for (i=0; i<s; i++) { 734 t->ASum[i] = 0; 735 t->GammaSum[i] = 0; 736 for (j=0; j<s; j++) { 737 t->ASum[i] += A[i*s+j]; 738 t->GammaSum[i] += Gamma[i*s+j]; 739 } 740 } 741 ierr = PetscMalloc(s*s*sizeof(PetscScalar),&GammaInv);CHKERRQ(ierr); /* Need to use Scalar for inverse, then convert back to Real */ 742 for (i=0; i<s*s; i++) GammaInv[i] = Gamma[i]; 743 for (i=0; i<s; i++) { 744 if (Gamma[i*s+i] == 0.0) { 745 GammaInv[i*s+i] = 1.0; 746 t->GammaZeroDiag[i] = PETSC_TRUE; 747 } else { 748 t->GammaZeroDiag[i] = PETSC_FALSE; 749 } 750 } 751 752 switch (s) { 753 case 1: GammaInv[0] = 1./GammaInv[0]; break; 754 case 2: ierr = PetscKernel_A_gets_inverse_A_2(GammaInv,0);CHKERRQ(ierr); break; 755 case 3: ierr = PetscKernel_A_gets_inverse_A_3(GammaInv,0);CHKERRQ(ierr); break; 756 case 4: ierr = PetscKernel_A_gets_inverse_A_4(GammaInv,0);CHKERRQ(ierr); break; 757 case 5: { 758 PetscInt ipvt5[5]; 759 MatScalar work5[5*5]; 760 ierr = PetscKernel_A_gets_inverse_A_5(GammaInv,ipvt5,work5,0);CHKERRQ(ierr); break; 761 } 762 case 6: ierr = PetscKernel_A_gets_inverse_A_6(GammaInv,0);CHKERRQ(ierr); break; 763 case 7: ierr = PetscKernel_A_gets_inverse_A_7(GammaInv,0);CHKERRQ(ierr); break; 764 default: SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented for %D stages",s); 765 } 766 for (i=0; i<s*s; i++) t->GammaInv[i] = PetscRealPart(GammaInv[i]); 767 ierr = PetscFree(GammaInv);CHKERRQ(ierr); 768 769 for (i=0; i<s; i++) { 770 for (k=0; k<i+1; k++) { 771 t->GammaExplicitCorr[i*s+k]=(t->GammaExplicitCorr[i*s+k])*(t->GammaInv[k*s+k]); 772 for (j=k+1; j<i+1; j++) { 773 t->GammaExplicitCorr[i*s+k]+=(t->GammaExplicitCorr[i*s+j])*(t->GammaInv[j*s+k]); 774 } 775 } 776 } 777 778 for (i=0; i<s; i++) { 779 for (j=0; j<s; j++) { 780 t->At[i*s+j] = 0; 781 for (k=0; k<s; k++) { 782 t->At[i*s+j] += t->A[i*s+k] * t->GammaInv[k*s+j]; 783 } 784 } 785 t->bt[i] = 0; 786 for (j=0; j<s; j++) { 787 t->bt[i] += t->b[j] * t->GammaInv[j*s+i]; 788 } 789 if (bembed) { 790 t->bembedt[i] = 0; 791 for (j=0; j<s; j++) { 792 t->bembedt[i] += t->bembed[j] * t->GammaInv[j*s+i]; 793 } 794 } 795 } 796 t->ccfl = 1.0; /* Fix this */ 797 798 t->pinterp = pinterp; 799 ierr = PetscMalloc(s*pinterp*sizeof(binterpt[0]),&t->binterpt);CHKERRQ(ierr); 800 ierr = PetscMemcpy(t->binterpt,binterpt,s*pinterp*sizeof(binterpt[0]));CHKERRQ(ierr); 801 link->next = RosWTableauList; 802 RosWTableauList = link; 803 PetscFunctionReturn(0); 804 } 805 806 #undef __FUNCT__ 807 #define __FUNCT__ "TSRosWRegisterRos4" 808 /*@C 809 TSRosWRegisterRos4 - register a fourth order Rosenbrock scheme by providing paramter choices 810 811 Not Collective, but the same schemes should be registered on all processes on which they will be used 812 813 Input Parameters: 814 + name - identifier for method 815 . gamma - leading coefficient (diagonal entry) 816 . a2 - design parameter, see Table 7.2 of Hairer&Wanner 817 . a3 - design parameter or PETSC_DEFAULT to satisfy one of the order five conditions (Eq 7.22) 818 . b3 - design parameter, see Table 7.2 of Hairer&Wanner 819 . beta43 - design parameter or PETSC_DEFAULT to use Equation 7.21 of Hairer&Wanner 820 . e4 - design parameter for embedded method, see coefficient E4 in ros4.f code from Hairer 821 822 Notes: 823 This routine encodes the design of fourth order Rosenbrock methods as described in Hairer and Wanner volume 2. 824 It is used here to implement several methods from the book and can be used to experiment with new methods. 825 It was written this way instead of by copying coefficients in order to provide better than double precision satisfaction of the order conditions. 826 827 Level: developer 828 829 .keywords: TS, register 830 831 .seealso: TSRosW, TSRosWRegister() 832 @*/ 833 PetscErrorCode TSRosWRegisterRos4(const TSRosWType name,PetscReal gamma,PetscReal a2,PetscReal a3,PetscReal b3,PetscReal e4) 834 { 835 PetscErrorCode ierr; 836 /* Declare numeric constants so they can be quad precision without being truncated at double */ 837 const PetscReal one = 1,two = 2,three = 3,four = 4,five = 5,six = 6,eight = 8,twelve = 12,twenty = 20,twentyfour = 24, 838 p32 = one/six - gamma + gamma*gamma, 839 p42 = one/eight - gamma/three, 840 p43 = one/twelve - gamma/three, 841 p44 = one/twentyfour - gamma/two + three/two*gamma*gamma - gamma*gamma*gamma, 842 p56 = one/twenty - gamma/four; 843 PetscReal a4,a32,a42,a43,b1,b2,b4,beta2p,beta3p,beta4p,beta32,beta42,beta43,beta32beta2p,beta4jbetajp; 844 PetscReal A[4][4],Gamma[4][4],b[4],bm[4]; 845 PetscScalar M[3][3],rhs[3]; 846 847 PetscFunctionBegin; 848 /* Step 1: choose Gamma (input) */ 849 /* Step 2: choose a2,a3,a4; b1,b2,b3,b4 to satisfy order conditions */ 850 if (a3 == PETSC_DEFAULT) a3 = (one/five - a2/four)/(one/four - a2/three); /* Eq 7.22 */ 851 a4 = a3; /* consequence of 7.20 */ 852 853 /* Solve order conditions 7.15a, 7.15c, 7.15e */ 854 M[0][0] = one; M[0][1] = one; M[0][2] = one; /* 7.15a */ 855 M[1][0] = 0.0; M[1][1] = a2*a2; M[1][2] = a4*a4; /* 7.15c */ 856 M[2][0] = 0.0; M[2][1] = a2*a2*a2; M[2][2] = a4*a4*a4; /* 7.15e */ 857 rhs[0] = one - b3; 858 rhs[1] = one/three - a3*a3*b3; 859 rhs[2] = one/four - a3*a3*a3*b3; 860 ierr = PetscKernel_A_gets_inverse_A_3(&M[0][0],0);CHKERRQ(ierr); 861 b1 = PetscRealPart(M[0][0]*rhs[0] + M[0][1]*rhs[1] + M[0][2]*rhs[2]); 862 b2 = PetscRealPart(M[1][0]*rhs[0] + M[1][1]*rhs[1] + M[1][2]*rhs[2]); 863 b4 = PetscRealPart(M[2][0]*rhs[0] + M[2][1]*rhs[1] + M[2][2]*rhs[2]); 864 865 /* Step 3 */ 866 beta43 = (p56 - a2*p43) / (b4*a3*a3*(a3 - a2)); /* 7.21 */ 867 beta32beta2p = p44 / (b4*beta43); /* 7.15h */ 868 beta4jbetajp = (p32 - b3*beta32beta2p) / b4; 869 M[0][0] = b2; M[0][1] = b3; M[0][2] = b4; 870 M[1][0] = a4*a4*beta32beta2p-a3*a3*beta4jbetajp; M[1][1] = a2*a2*beta4jbetajp; M[1][2] = -a2*a2*beta32beta2p; 871 M[2][0] = b4*beta43*a3*a3-p43; M[2][1] = -b4*beta43*a2*a2; M[2][2] = 0; 872 rhs[0] = one/two - gamma; rhs[1] = 0; rhs[2] = -a2*a2*p32; 873 ierr = PetscKernel_A_gets_inverse_A_3(&M[0][0],0);CHKERRQ(ierr); 874 beta2p = PetscRealPart(M[0][0]*rhs[0] + M[0][1]*rhs[1] + M[0][2]*rhs[2]); 875 beta3p = PetscRealPart(M[1][0]*rhs[0] + M[1][1]*rhs[1] + M[1][2]*rhs[2]); 876 beta4p = PetscRealPart(M[2][0]*rhs[0] + M[2][1]*rhs[1] + M[2][2]*rhs[2]); 877 878 /* Step 4: back-substitute */ 879 beta32 = beta32beta2p / beta2p; 880 beta42 = (beta4jbetajp - beta43*beta3p) / beta2p; 881 882 /* Step 5: 7.15f and 7.20, then 7.16 */ 883 a43 = 0; 884 a32 = p42 / (b3*a3*beta2p + b4*a4*beta2p); 885 a42 = a32; 886 887 A[0][0] = 0; A[0][1] = 0; A[0][2] = 0; A[0][3] = 0; 888 A[1][0] = a2; A[1][1] = 0; A[1][2] = 0; A[1][3] = 0; 889 A[2][0] = a3-a32; A[2][1] = a32; A[2][2] = 0; A[2][3] = 0; 890 A[3][0] = a4-a43-a42; A[3][1] = a42; A[3][2] = a43; A[3][3] = 0; 891 Gamma[0][0] = gamma; Gamma[0][1] = 0; Gamma[0][2] = 0; Gamma[0][3] = 0; 892 Gamma[1][0] = beta2p-A[1][0]; Gamma[1][1] = gamma; Gamma[1][2] = 0; Gamma[1][3] = 0; 893 Gamma[2][0] = beta3p-beta32-A[2][0]; Gamma[2][1] = beta32-A[2][1]; Gamma[2][2] = gamma; Gamma[2][3] = 0; 894 Gamma[3][0] = beta4p-beta42-beta43-A[3][0]; Gamma[3][1] = beta42-A[3][1]; Gamma[3][2] = beta43-A[3][2]; Gamma[3][3] = gamma; 895 b[0] = b1; b[1] = b2; b[2] = b3; b[3] = b4; 896 897 /* Construct embedded formula using given e4. We are solving Equation 7.18. */ 898 bm[3] = b[3] - e4*gamma; /* using definition of E4 */ 899 bm[2] = (p32 - beta4jbetajp*bm[3]) / (beta32*beta2p); /* fourth row of 7.18 */ 900 bm[1] = (one/two - gamma - beta3p*bm[2] - beta4p*bm[3]) / beta2p; /* second row */ 901 bm[0] = one - bm[1] - bm[2] - bm[3]; /* first row */ 902 903 { 904 const PetscReal misfit = a2*a2*bm[1] + a3*a3*bm[2] + a4*a4*bm[3] - one/three; 905 if (PetscAbs(misfit) > PETSC_SMALL) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Assumptions violated, could not construct a third order embedded method"); 906 } 907 ierr = TSRosWRegister(name,4,4,&A[0][0],&Gamma[0][0],b,bm,0,PETSC_NULL);CHKERRQ(ierr); 908 PetscFunctionReturn(0); 909 } 910 911 #undef __FUNCT__ 912 #define __FUNCT__ "TSEvaluateStep_RosW" 913 /* 914 The step completion formula is 915 916 x1 = x0 + b^T Y 917 918 where Y is the multi-vector of stages corrections. This function can be called before or after ts->vec_sol has been 919 updated. Suppose we have a completion formula b and an embedded formula be of different order. We can write 920 921 x1e = x0 + be^T Y 922 = x1 - b^T Y + be^T Y 923 = x1 + (be - b)^T Y 924 925 so we can evaluate the method of different order even after the step has been optimistically completed. 926 */ 927 static PetscErrorCode TSEvaluateStep_RosW(TS ts,PetscInt order,Vec X,PetscBool *done) 928 { 929 TS_RosW *ros = (TS_RosW*)ts->data; 930 RosWTableau tab = ros->tableau; 931 PetscScalar *w = ros->work; 932 PetscInt i; 933 PetscErrorCode ierr; 934 935 PetscFunctionBegin; 936 if (order == tab->order) { 937 if (ros->status == TS_STEP_INCOMPLETE) { /* Use standard completion formula */ 938 ierr = VecCopy(ts->vec_sol,X);CHKERRQ(ierr); 939 for (i=0; i<tab->s; i++) w[i] = tab->bt[i]; 940 ierr = VecMAXPY(X,tab->s,w,ros->Y);CHKERRQ(ierr); 941 } else {ierr = VecCopy(ts->vec_sol,X);CHKERRQ(ierr);} 942 if (done) *done = PETSC_TRUE; 943 PetscFunctionReturn(0); 944 } else if (order == tab->order-1) { 945 if (!tab->bembedt) goto unavailable; 946 if (ros->status == TS_STEP_INCOMPLETE) { /* Use embedded completion formula */ 947 ierr = VecCopy(ts->vec_sol,X);CHKERRQ(ierr); 948 for (i=0; i<tab->s; i++) w[i] = tab->bembedt[i]; 949 ierr = VecMAXPY(X,tab->s,w,ros->Y);CHKERRQ(ierr); 950 } else { /* Use rollback-and-recomplete formula (bembedt - bt) */ 951 for (i=0; i<tab->s; i++) w[i] = tab->bembedt[i] - tab->bt[i]; 952 ierr = VecCopy(ts->vec_sol,X);CHKERRQ(ierr); 953 ierr = VecMAXPY(X,tab->s,w,ros->Y);CHKERRQ(ierr); 954 } 955 if (done) *done = PETSC_TRUE; 956 PetscFunctionReturn(0); 957 } 958 unavailable: 959 if (done) *done = PETSC_FALSE; 960 else SETERRQ3(((PetscObject)ts)->comm,PETSC_ERR_SUP,"Rosenbrock-W '%s' of order %D cannot evaluate step at order %D",tab->name,tab->order,order); 961 PetscFunctionReturn(0); 962 } 963 964 #undef __FUNCT__ 965 #define __FUNCT__ "TSStep_RosW" 966 static PetscErrorCode TSStep_RosW(TS ts) 967 { 968 TS_RosW *ros = (TS_RosW*)ts->data; 969 RosWTableau tab = ros->tableau; 970 const PetscInt s = tab->s; 971 const PetscReal *At = tab->At,*Gamma = tab->Gamma,*ASum = tab->ASum,*GammaInv = tab->GammaInv; 972 const PetscReal *GammaExplicitCorr = tab->GammaExplicitCorr; 973 const PetscBool *GammaZeroDiag = tab->GammaZeroDiag; 974 PetscScalar *w = ros->work; 975 Vec *Y = ros->Y,Ydot = ros->Ydot,Zdot = ros->Zdot,Zstage = ros->Zstage; 976 SNES snes; 977 TSAdapt adapt; 978 PetscInt i,j,its,lits,reject,next_scheme; 979 PetscReal next_time_step; 980 PetscBool accept; 981 PetscErrorCode ierr; 982 MatStructure str; 983 984 PetscFunctionBegin; 985 ierr = TSGetSNES(ts,&snes);CHKERRQ(ierr); 986 next_time_step = ts->time_step; 987 accept = PETSC_TRUE; 988 ros->status = TS_STEP_INCOMPLETE; 989 990 for (reject=0; reject<ts->max_reject && !ts->reason; reject++,ts->reject++) { 991 const PetscReal h = ts->time_step; 992 ierr = VecCopy(ts->vec_sol,ros->VecSolPrev);CHKERRQ(ierr);/*move this at the end*/ 993 for (i=0; i<s; i++) { 994 ros->stage_time = ts->ptime + h*ASum[i]; 995 if (GammaZeroDiag[i]) { 996 ros->stage_explicit = PETSC_TRUE; 997 ros->shift = 1./h; 998 } else { 999 ros->stage_explicit = PETSC_FALSE; 1000 ros->shift = 1./(h*Gamma[i*s+i]); 1001 } 1002 1003 ierr = VecCopy(ts->vec_sol,Zstage);CHKERRQ(ierr); 1004 for (j=0; j<i; j++) w[j] = At[i*s+j]; 1005 ierr = VecMAXPY(Zstage,i,w,Y);CHKERRQ(ierr); 1006 1007 for (j=0; j<i; j++) w[j] = 1./h * GammaInv[i*s+j]; 1008 ierr = VecZeroEntries(Zdot);CHKERRQ(ierr); 1009 ierr = VecMAXPY(Zdot,i,w,Y);CHKERRQ(ierr); 1010 1011 /* Initial guess taken from last stage */ 1012 ierr = VecZeroEntries(Y[i]);CHKERRQ(ierr); 1013 1014 if (!ros->stage_explicit) { 1015 if (!ros->recompute_jacobian && !i) { 1016 ierr = SNESSetLagJacobian(snes,-2);CHKERRQ(ierr); /* Recompute the Jacobian on this solve, but not again */ 1017 } 1018 ierr = SNESSolve(snes,PETSC_NULL,Y[i]);CHKERRQ(ierr); 1019 ierr = SNESGetIterationNumber(snes,&its);CHKERRQ(ierr); 1020 ierr = SNESGetLinearSolveIterations(snes,&lits);CHKERRQ(ierr); 1021 ts->snes_its += its; ts->ksp_its += lits; 1022 ierr = TSGetAdapt(ts,&adapt);CHKERRQ(ierr); 1023 ierr = TSAdaptCheckStage(adapt,ts,&accept);CHKERRQ(ierr); 1024 if (!accept) goto reject_step; 1025 } else { 1026 Mat J,Jp; 1027 ierr = VecZeroEntries(Ydot);CHKERRQ(ierr); /* Evaluate Y[i]=G(t,Ydot=0,Zstage) */ 1028 ierr = TSComputeIFunction(ts,ros->stage_time,Zstage,Ydot,Y[i],PETSC_FALSE);CHKERRQ(ierr); 1029 ierr = VecScale(Y[i],-1.0); 1030 ierr = VecAXPY(Y[i],-1.0,Zdot);CHKERRQ(ierr); /*Y[i]=F(Zstage)-Zdot[=GammaInv*Y]*/ 1031 1032 ierr = VecZeroEntries(Zstage);CHKERRQ(ierr); /* Zstage = GammaExplicitCorr[i,j] * Y[j] */ 1033 for (j=0; j<i; j++) w[j] = GammaExplicitCorr[i*s+j]; 1034 ierr = VecMAXPY(Zstage,i,w,Y);CHKERRQ(ierr); 1035 /*Y[i] += Y[i] + Jac*Zstage[=Jac*GammaExplicitCorr[i,j] * Y[j]] */ 1036 str = SAME_NONZERO_PATTERN; 1037 ierr = TSGetIJacobian(ts,&J,&Jp,PETSC_NULL,PETSC_NULL);CHKERRQ(ierr); 1038 ierr = TSComputeIJacobian(ts,ros->stage_time,ts->vec_sol,Ydot,0,&J,&Jp,&str,PETSC_FALSE);CHKERRQ(ierr); 1039 ierr = MatMult(J,Zstage,Zdot); 1040 1041 ierr = VecAXPY(Y[i],-1.0,Zdot);CHKERRQ(ierr); 1042 ierr = VecScale(Y[i],h); 1043 ts->ksp_its += 1; 1044 } 1045 } 1046 ierr = TSEvaluateStep(ts,tab->order,ts->vec_sol,PETSC_NULL);CHKERRQ(ierr); 1047 ros->status = TS_STEP_PENDING; 1048 1049 /* Register only the current method as a candidate because we're not supporting multiple candidates yet. */ 1050 ierr = TSGetAdapt(ts,&adapt);CHKERRQ(ierr); 1051 ierr = TSAdaptCandidatesClear(adapt);CHKERRQ(ierr); 1052 ierr = TSAdaptCandidateAdd(adapt,tab->name,tab->order,1,tab->ccfl,1.*tab->s,PETSC_TRUE);CHKERRQ(ierr); 1053 ierr = TSAdaptChoose(adapt,ts,ts->time_step,&next_scheme,&next_time_step,&accept);CHKERRQ(ierr); 1054 if (accept) { 1055 /* ignore next_scheme for now */ 1056 ts->ptime += ts->time_step; 1057 ts->time_step = next_time_step; 1058 ts->steps++; 1059 ros->status = TS_STEP_COMPLETE; 1060 break; 1061 } else { /* Roll back the current step */ 1062 for (i=0; i<s; i++) w[i] = -tab->bt[i]; 1063 ierr = VecMAXPY(ts->vec_sol,s,w,Y);CHKERRQ(ierr); 1064 ts->time_step = next_time_step; 1065 ros->status = TS_STEP_INCOMPLETE; 1066 } 1067 reject_step: continue; 1068 } 1069 if (ros->status != TS_STEP_COMPLETE && !ts->reason) ts->reason = TS_DIVERGED_STEP_REJECTED; 1070 PetscFunctionReturn(0); 1071 } 1072 1073 #undef __FUNCT__ 1074 #define __FUNCT__ "TSInterpolate_RosW" 1075 static PetscErrorCode TSInterpolate_RosW(TS ts,PetscReal itime,Vec X) 1076 { 1077 TS_RosW *ros = (TS_RosW*)ts->data; 1078 PetscInt s = ros->tableau->s,pinterp = ros->tableau->pinterp,i,j; 1079 PetscReal h; 1080 PetscReal tt,t; 1081 PetscScalar *bt; 1082 const PetscReal *Bt = ros->tableau->binterpt; 1083 PetscErrorCode ierr; 1084 const PetscReal *GammaInv = ros->tableau->GammaInv; 1085 PetscScalar *w = ros->work; 1086 Vec *Y = ros->Y; 1087 1088 PetscFunctionBegin; 1089 if (!Bt) SETERRQ1(((PetscObject)ts)->comm,PETSC_ERR_SUP,"TSRosW %s does not have an interpolation formula",ros->tableau->name); 1090 1091 switch (ros->status) { 1092 case TS_STEP_INCOMPLETE: 1093 case TS_STEP_PENDING: 1094 h = ts->time_step; 1095 t = (itime - ts->ptime)/h; 1096 break; 1097 case TS_STEP_COMPLETE: 1098 h = ts->time_step_prev; 1099 t = (itime - ts->ptime)/h + 1; /* In the interval [0,1] */ 1100 break; 1101 default: SETERRQ(((PetscObject)ts)->comm,PETSC_ERR_PLIB,"Invalid TSStepStatus"); 1102 } 1103 ierr = PetscMalloc(s*sizeof(bt[0]),&bt);CHKERRQ(ierr); 1104 for (i=0; i<s; i++) bt[i] = 0; 1105 for (j=0,tt=t; j<pinterp; j++,tt*=t) { 1106 for (i=0; i<s; i++) { 1107 bt[i] += Bt[i*pinterp+j] * tt; 1108 } 1109 } 1110 1111 /* y(t+tt*h) = y(t) + Sum bt(tt) * GammaInv * Ydot */ 1112 /*X<-0*/ 1113 ierr = VecZeroEntries(X);CHKERRQ(ierr); 1114 1115 /*X<- Sum bt_i * GammaInv(i,1:i) * Y(1:i) */ 1116 for (j=0; j<s; j++) w[j]=0; 1117 for (j=0; j<s; j++) { 1118 for (i=j; i<s; i++) { 1119 w[j] += bt[i]*GammaInv[i*s+j]; 1120 } 1121 } 1122 ierr = VecMAXPY(X,i,w,Y);CHKERRQ(ierr); 1123 1124 /*X<-y(t) + X*/ 1125 ierr = VecAXPY(X,1.0,ros->VecSolPrev);CHKERRQ(ierr); 1126 1127 ierr = PetscFree(bt);CHKERRQ(ierr); 1128 1129 PetscFunctionReturn(0); 1130 } 1131 1132 /*------------------------------------------------------------*/ 1133 #undef __FUNCT__ 1134 #define __FUNCT__ "TSReset_RosW" 1135 static PetscErrorCode TSReset_RosW(TS ts) 1136 { 1137 TS_RosW *ros = (TS_RosW*)ts->data; 1138 PetscInt s; 1139 PetscErrorCode ierr; 1140 1141 PetscFunctionBegin; 1142 if (!ros->tableau) PetscFunctionReturn(0); 1143 s = ros->tableau->s; 1144 ierr = VecDestroyVecs(s,&ros->Y);CHKERRQ(ierr); 1145 ierr = VecDestroy(&ros->Ydot);CHKERRQ(ierr); 1146 ierr = VecDestroy(&ros->Ystage);CHKERRQ(ierr); 1147 ierr = VecDestroy(&ros->Zdot);CHKERRQ(ierr); 1148 ierr = VecDestroy(&ros->Zstage);CHKERRQ(ierr); 1149 ierr = VecDestroy(&ros->VecSolPrev);CHKERRQ(ierr); 1150 ierr = PetscFree(ros->work);CHKERRQ(ierr); 1151 PetscFunctionReturn(0); 1152 } 1153 1154 #undef __FUNCT__ 1155 #define __FUNCT__ "TSDestroy_RosW" 1156 static PetscErrorCode TSDestroy_RosW(TS ts) 1157 { 1158 PetscErrorCode ierr; 1159 1160 PetscFunctionBegin; 1161 ierr = TSReset_RosW(ts);CHKERRQ(ierr); 1162 ierr = PetscFree(ts->data);CHKERRQ(ierr); 1163 ierr = PetscObjectComposeFunctionDynamic((PetscObject)ts,"TSRosWGetType_C","",PETSC_NULL);CHKERRQ(ierr); 1164 ierr = PetscObjectComposeFunctionDynamic((PetscObject)ts,"TSRosWSetType_C","",PETSC_NULL);CHKERRQ(ierr); 1165 ierr = PetscObjectComposeFunctionDynamic((PetscObject)ts,"TSRosWSetRecomputeJacobian_C","",PETSC_NULL);CHKERRQ(ierr); 1166 PetscFunctionReturn(0); 1167 } 1168 1169 1170 #undef __FUNCT__ 1171 #define __FUNCT__ "TSRosWGetVecs" 1172 static PetscErrorCode TSRosWGetVecs(TS ts,DM dm,Vec *Ydot,Vec *Zdot,Vec *Ystage,Vec *Zstage) 1173 { 1174 TS_RosW *rw = (TS_RosW*)ts->data; 1175 PetscErrorCode ierr; 1176 1177 PetscFunctionBegin; 1178 if (Ydot) { 1179 if (dm && dm != ts->dm) { 1180 ierr = DMGetNamedGlobalVector(dm,"TSRosW_Ydot",Ydot);CHKERRQ(ierr); 1181 } else *Ydot = rw->Ydot; 1182 } 1183 if (Zdot) { 1184 if (dm && dm != ts->dm) { 1185 ierr = DMGetNamedGlobalVector(dm,"TSRosW_Zdot",Zdot);CHKERRQ(ierr); 1186 } else *Zdot = rw->Zdot; 1187 } 1188 if (Ystage) { 1189 if (dm && dm != ts->dm) { 1190 ierr = DMGetNamedGlobalVector(dm,"TSRosW_Ystage",Ystage);CHKERRQ(ierr); 1191 } else *Ystage = rw->Ystage; 1192 } 1193 if (Zstage) { 1194 if (dm && dm != ts->dm) { 1195 ierr = DMGetNamedGlobalVector(dm,"TSRosW_Zstage",Zstage);CHKERRQ(ierr); 1196 } else *Zstage = rw->Zstage; 1197 } 1198 1199 PetscFunctionReturn(0); 1200 } 1201 1202 1203 #undef __FUNCT__ 1204 #define __FUNCT__ "TSRosWRestoreVecs" 1205 static PetscErrorCode TSRosWRestoreVecs(TS ts,DM dm,Vec *Ydot,Vec *Zdot, Vec *Ystage, Vec *Zstage) 1206 { 1207 PetscErrorCode ierr; 1208 1209 PetscFunctionBegin; 1210 if (Ydot) { 1211 if (dm && dm != ts->dm) { 1212 ierr = DMRestoreNamedGlobalVector(dm,"TSRosW_Ydot",Ydot);CHKERRQ(ierr); 1213 } 1214 } 1215 if (Zdot) { 1216 if (dm && dm != ts->dm) { 1217 ierr = DMRestoreNamedGlobalVector(dm,"TSRosW_Zdot",Zdot);CHKERRQ(ierr); 1218 } 1219 } 1220 if (Ystage) { 1221 if (dm && dm != ts->dm) { 1222 ierr = DMRestoreNamedGlobalVector(dm,"TSRosW_Ystage",Ystage);CHKERRQ(ierr); 1223 } 1224 } 1225 if (Zstage) { 1226 if (dm && dm != ts->dm) { 1227 ierr = DMRestoreNamedGlobalVector(dm,"TSRosW_Zstage",Zstage);CHKERRQ(ierr); 1228 } 1229 } 1230 PetscFunctionReturn(0); 1231 } 1232 1233 #undef __FUNCT__ 1234 #define __FUNCT__ "DMCoarsenHook_TSRosW" 1235 static PetscErrorCode DMCoarsenHook_TSRosW(DM fine,DM coarse,void *ctx) 1236 { 1237 1238 PetscFunctionBegin; 1239 PetscFunctionReturn(0); 1240 } 1241 1242 #undef __FUNCT__ 1243 #define __FUNCT__ "DMRestrictHook_TSRosW" 1244 static PetscErrorCode DMRestrictHook_TSRosW(DM fine,Mat restrct,Vec rscale,Mat inject,DM coarse,void *ctx) 1245 { 1246 TS ts = (TS)ctx; 1247 PetscErrorCode ierr; 1248 Vec Ydot,Zdot,Ystage,Zstage; 1249 Vec Ydotc,Zdotc,Ystagec,Zstagec; 1250 1251 PetscFunctionBegin; 1252 ierr = TSRosWGetVecs(ts,fine,&Ydot,&Ystage,&Zdot,&Zstage);CHKERRQ(ierr); 1253 ierr = TSRosWGetVecs(ts,coarse,&Ydotc,&Ystagec,&Zdotc,&Zstagec);CHKERRQ(ierr); 1254 ierr = MatRestrict(restrct,Ydot,Ydotc);CHKERRQ(ierr); 1255 ierr = VecPointwiseMult(Ydotc,rscale,Ydotc);CHKERRQ(ierr); 1256 ierr = MatRestrict(restrct,Ystage,Ystagec);CHKERRQ(ierr); 1257 ierr = VecPointwiseMult(Ystagec,rscale,Ystagec);CHKERRQ(ierr); 1258 ierr = MatRestrict(restrct,Zdot,Zdotc);CHKERRQ(ierr); 1259 ierr = VecPointwiseMult(Zdotc,rscale,Zdotc);CHKERRQ(ierr); 1260 ierr = MatRestrict(restrct,Zstage,Zstagec);CHKERRQ(ierr); 1261 ierr = VecPointwiseMult(Zstagec,rscale,Zstagec);CHKERRQ(ierr); 1262 ierr = TSRosWRestoreVecs(ts,fine,&Ydot,&Ystage,&Zdot,&Zstage);CHKERRQ(ierr); 1263 ierr = TSRosWRestoreVecs(ts,coarse,&Ydotc,&Ystagec,&Zdotc,&Zstagec);CHKERRQ(ierr); 1264 PetscFunctionReturn(0); 1265 } 1266 1267 /* 1268 This defines the nonlinear equation that is to be solved with SNES 1269 G(U) = F[t0+Theta*dt, U, (U-U0)*shift] = 0 1270 */ 1271 #undef __FUNCT__ 1272 #define __FUNCT__ "SNESTSFormFunction_RosW" 1273 static PetscErrorCode SNESTSFormFunction_RosW(SNES snes,Vec X,Vec F,TS ts) 1274 { 1275 TS_RosW *ros = (TS_RosW*)ts->data; 1276 PetscErrorCode ierr; 1277 Vec Ydot,Zdot,Ystage,Zstage; 1278 DM dm,dmsave; 1279 1280 PetscFunctionBegin; 1281 ierr = SNESGetDM(snes,&dm);CHKERRQ(ierr); 1282 ierr = TSRosWGetVecs(ts,dm,&Ydot,&Zdot,&Ystage,&Zstage);CHKERRQ(ierr); 1283 ierr = VecWAXPY(Ydot,ros->shift,X,Zdot);CHKERRQ(ierr); /* Ydot = shift*X + Zdot */ 1284 ierr = VecWAXPY(Ystage,1.0,X,Zstage);CHKERRQ(ierr); /* Ystage = X + Zstage */ 1285 dmsave = ts->dm; 1286 ts->dm = dm; 1287 ierr = TSComputeIFunction(ts,ros->stage_time,Ystage,Ydot,F,PETSC_FALSE);CHKERRQ(ierr); 1288 ts->dm = dmsave; 1289 ierr = TSRosWRestoreVecs(ts,dm,&Ydot,&Zdot,&Ystage,&Zstage);CHKERRQ(ierr); 1290 PetscFunctionReturn(0); 1291 } 1292 1293 #undef __FUNCT__ 1294 #define __FUNCT__ "SNESTSFormJacobian_RosW" 1295 static PetscErrorCode SNESTSFormJacobian_RosW(SNES snes,Vec X,Mat *A,Mat *B,MatStructure *str,TS ts) 1296 { 1297 TS_RosW *ros = (TS_RosW*)ts->data; 1298 Vec Ydot,Zdot,Ystage,Zstage; 1299 PetscErrorCode ierr; 1300 DM dm,dmsave; 1301 1302 PetscFunctionBegin; 1303 /* ros->Ydot and ros->Ystage have already been computed in SNESTSFormFunction_RosW (SNES guarantees this) */ 1304 ierr = SNESGetDM(snes,&dm);CHKERRQ(ierr); 1305 ierr = TSRosWGetVecs(ts,dm,&Ydot,&Zdot,&Ystage,&Zstage);CHKERRQ(ierr); 1306 dmsave = ts->dm; 1307 ts->dm = dm; 1308 ierr = TSComputeIJacobian(ts,ros->stage_time,Ystage,Ydot,ros->shift,A,B,str,PETSC_TRUE);CHKERRQ(ierr); 1309 ts->dm = dmsave; 1310 ierr = TSRosWRestoreVecs(ts,dm,&Ydot,&Zdot,&Ystage,&Zstage);CHKERRQ(ierr); 1311 PetscFunctionReturn(0); 1312 } 1313 1314 #undef __FUNCT__ 1315 #define __FUNCT__ "TSSetUp_RosW" 1316 static PetscErrorCode TSSetUp_RosW(TS ts) 1317 { 1318 TS_RosW *ros = (TS_RosW*)ts->data; 1319 RosWTableau tab = ros->tableau; 1320 PetscInt s = tab->s; 1321 PetscErrorCode ierr; 1322 DM dm; 1323 1324 PetscFunctionBegin; 1325 if (!ros->tableau) { 1326 ierr = TSRosWSetType(ts,TSRosWDefault);CHKERRQ(ierr); 1327 } 1328 ierr = VecDuplicateVecs(ts->vec_sol,s,&ros->Y);CHKERRQ(ierr); 1329 ierr = VecDuplicate(ts->vec_sol,&ros->Ydot);CHKERRQ(ierr); 1330 ierr = VecDuplicate(ts->vec_sol,&ros->Ystage);CHKERRQ(ierr); 1331 ierr = VecDuplicate(ts->vec_sol,&ros->Zdot);CHKERRQ(ierr); 1332 ierr = VecDuplicate(ts->vec_sol,&ros->Zstage);CHKERRQ(ierr); 1333 ierr = VecDuplicate(ts->vec_sol,&ros->VecSolPrev);CHKERRQ(ierr); 1334 ierr = PetscMalloc(s*sizeof(ros->work[0]),&ros->work);CHKERRQ(ierr); 1335 ierr = TSGetDM(ts,&dm); 1336 if (dm) { 1337 ierr = DMCoarsenHookAdd(dm,DMCoarsenHook_TSRosW,DMRestrictHook_TSRosW,ts);CHKERRQ(ierr); 1338 } 1339 PetscFunctionReturn(0); 1340 } 1341 /*------------------------------------------------------------*/ 1342 1343 #undef __FUNCT__ 1344 #define __FUNCT__ "TSSetFromOptions_RosW" 1345 static PetscErrorCode TSSetFromOptions_RosW(TS ts) 1346 { 1347 TS_RosW *ros = (TS_RosW*)ts->data; 1348 PetscErrorCode ierr; 1349 char rostype[256]; 1350 1351 PetscFunctionBegin; 1352 ierr = PetscOptionsHead("RosW ODE solver options");CHKERRQ(ierr); 1353 { 1354 RosWTableauLink link; 1355 PetscInt count,choice; 1356 PetscBool flg; 1357 const char **namelist; 1358 SNES snes; 1359 1360 ierr = PetscStrncpy(rostype,TSRosWDefault,sizeof rostype);CHKERRQ(ierr); 1361 for (link=RosWTableauList,count=0; link; link=link->next,count++) ; 1362 ierr = PetscMalloc(count*sizeof(char*),&namelist);CHKERRQ(ierr); 1363 for (link=RosWTableauList,count=0; link; link=link->next,count++) namelist[count] = link->tab.name; 1364 ierr = PetscOptionsEList("-ts_rosw_type","Family of Rosenbrock-W method","TSRosWSetType",(const char*const*)namelist,count,rostype,&choice,&flg);CHKERRQ(ierr); 1365 ierr = TSRosWSetType(ts,flg ? namelist[choice] : rostype);CHKERRQ(ierr); 1366 ierr = PetscFree(namelist);CHKERRQ(ierr); 1367 1368 ierr = PetscOptionsBool("-ts_rosw_recompute_jacobian","Recompute the Jacobian at each stage","TSRosWSetRecomputeJacobian",ros->recompute_jacobian,&ros->recompute_jacobian,PETSC_NULL);CHKERRQ(ierr); 1369 1370 /* Rosenbrock methods are linearly implicit, so set that unless the user has specifically asked for something else */ 1371 ierr = TSGetSNES(ts,&snes);CHKERRQ(ierr); 1372 if (!((PetscObject)snes)->type_name) { 1373 ierr = SNESSetType(snes,SNESKSPONLY);CHKERRQ(ierr); 1374 } 1375 ierr = SNESSetFromOptions(snes);CHKERRQ(ierr); 1376 } 1377 ierr = PetscOptionsTail();CHKERRQ(ierr); 1378 PetscFunctionReturn(0); 1379 } 1380 1381 #undef __FUNCT__ 1382 #define __FUNCT__ "PetscFormatRealArray" 1383 static PetscErrorCode PetscFormatRealArray(char buf[],size_t len,const char *fmt,PetscInt n,const PetscReal x[]) 1384 { 1385 PetscErrorCode ierr; 1386 PetscInt i; 1387 size_t left,count; 1388 char *p; 1389 1390 PetscFunctionBegin; 1391 for (i=0,p=buf,left=len; i<n; i++) { 1392 ierr = PetscSNPrintfCount(p,left,fmt,&count,x[i]);CHKERRQ(ierr); 1393 if (count >= left) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Insufficient space in buffer"); 1394 left -= count; 1395 p += count; 1396 *p++ = ' '; 1397 } 1398 p[i ? 0 : -1] = 0; 1399 PetscFunctionReturn(0); 1400 } 1401 1402 #undef __FUNCT__ 1403 #define __FUNCT__ "TSView_RosW" 1404 static PetscErrorCode TSView_RosW(TS ts,PetscViewer viewer) 1405 { 1406 TS_RosW *ros = (TS_RosW*)ts->data; 1407 RosWTableau tab = ros->tableau; 1408 PetscBool iascii; 1409 PetscErrorCode ierr; 1410 1411 PetscFunctionBegin; 1412 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 1413 if (iascii) { 1414 const TSRosWType rostype; 1415 PetscInt i; 1416 PetscReal abscissa[512]; 1417 char buf[512]; 1418 ierr = TSRosWGetType(ts,&rostype);CHKERRQ(ierr); 1419 ierr = PetscViewerASCIIPrintf(viewer," Rosenbrock-W %s\n",rostype);CHKERRQ(ierr); 1420 ierr = PetscFormatRealArray(buf,sizeof buf,"% 8.6f",tab->s,tab->ASum);CHKERRQ(ierr); 1421 ierr = PetscViewerASCIIPrintf(viewer," Abscissa of A = %s\n",buf);CHKERRQ(ierr); 1422 for (i=0; i<tab->s; i++) abscissa[i] = tab->ASum[i] + tab->Gamma[i]; 1423 ierr = PetscFormatRealArray(buf,sizeof buf,"% 8.6f",tab->s,abscissa);CHKERRQ(ierr); 1424 ierr = PetscViewerASCIIPrintf(viewer," Abscissa of A+Gamma = %s\n",buf);CHKERRQ(ierr); 1425 } 1426 ierr = SNESView(ts->snes,viewer);CHKERRQ(ierr); 1427 PetscFunctionReturn(0); 1428 } 1429 1430 #undef __FUNCT__ 1431 #define __FUNCT__ "TSRosWSetType" 1432 /*@C 1433 TSRosWSetType - Set the type of Rosenbrock-W scheme 1434 1435 Logically collective 1436 1437 Input Parameter: 1438 + ts - timestepping context 1439 - rostype - type of Rosenbrock-W scheme 1440 1441 Level: beginner 1442 1443 .seealso: TSRosWGetType(), TSROSW, TSROSW2M, TSROSW2P, TSROSWRA3PW, TSROSWRA34PW2, TSROSWRODAS3, TSROSWSANDU3, TSROSWASSP3P3S1C, TSROSWLASSP3P4S2C, TSROSWLLSSP3P4S2C, TSROSWARK3 1444 @*/ 1445 PetscErrorCode TSRosWSetType(TS ts,const TSRosWType rostype) 1446 { 1447 PetscErrorCode ierr; 1448 1449 PetscFunctionBegin; 1450 PetscValidHeaderSpecific(ts,TS_CLASSID,1); 1451 ierr = PetscTryMethod(ts,"TSRosWSetType_C",(TS,const TSRosWType),(ts,rostype));CHKERRQ(ierr); 1452 PetscFunctionReturn(0); 1453 } 1454 1455 #undef __FUNCT__ 1456 #define __FUNCT__ "TSRosWGetType" 1457 /*@C 1458 TSRosWGetType - Get the type of Rosenbrock-W scheme 1459 1460 Logically collective 1461 1462 Input Parameter: 1463 . ts - timestepping context 1464 1465 Output Parameter: 1466 . rostype - type of Rosenbrock-W scheme 1467 1468 Level: intermediate 1469 1470 .seealso: TSRosWGetType() 1471 @*/ 1472 PetscErrorCode TSRosWGetType(TS ts,const TSRosWType *rostype) 1473 { 1474 PetscErrorCode ierr; 1475 1476 PetscFunctionBegin; 1477 PetscValidHeaderSpecific(ts,TS_CLASSID,1); 1478 ierr = PetscUseMethod(ts,"TSRosWGetType_C",(TS,const TSRosWType*),(ts,rostype));CHKERRQ(ierr); 1479 PetscFunctionReturn(0); 1480 } 1481 1482 #undef __FUNCT__ 1483 #define __FUNCT__ "TSRosWSetRecomputeJacobian" 1484 /*@C 1485 TSRosWSetRecomputeJacobian - Set whether to recompute the Jacobian at each stage. The default is to update the Jacobian once per step. 1486 1487 Logically collective 1488 1489 Input Parameter: 1490 + ts - timestepping context 1491 - flg - PETSC_TRUE to recompute the Jacobian at each stage 1492 1493 Level: intermediate 1494 1495 .seealso: TSRosWGetType() 1496 @*/ 1497 PetscErrorCode TSRosWSetRecomputeJacobian(TS ts,PetscBool flg) 1498 { 1499 PetscErrorCode ierr; 1500 1501 PetscFunctionBegin; 1502 PetscValidHeaderSpecific(ts,TS_CLASSID,1); 1503 ierr = PetscTryMethod(ts,"TSRosWSetRecomputeJacobian_C",(TS,PetscBool),(ts,flg));CHKERRQ(ierr); 1504 PetscFunctionReturn(0); 1505 } 1506 1507 EXTERN_C_BEGIN 1508 #undef __FUNCT__ 1509 #define __FUNCT__ "TSRosWGetType_RosW" 1510 PetscErrorCode TSRosWGetType_RosW(TS ts,const TSRosWType *rostype) 1511 { 1512 TS_RosW *ros = (TS_RosW*)ts->data; 1513 PetscErrorCode ierr; 1514 1515 PetscFunctionBegin; 1516 if (!ros->tableau) {ierr = TSRosWSetType(ts,TSRosWDefault);CHKERRQ(ierr);} 1517 *rostype = ros->tableau->name; 1518 PetscFunctionReturn(0); 1519 } 1520 #undef __FUNCT__ 1521 #define __FUNCT__ "TSRosWSetType_RosW" 1522 PetscErrorCode TSRosWSetType_RosW(TS ts,const TSRosWType rostype) 1523 { 1524 TS_RosW *ros = (TS_RosW*)ts->data; 1525 PetscErrorCode ierr; 1526 PetscBool match; 1527 RosWTableauLink link; 1528 1529 PetscFunctionBegin; 1530 if (ros->tableau) { 1531 ierr = PetscStrcmp(ros->tableau->name,rostype,&match);CHKERRQ(ierr); 1532 if (match) PetscFunctionReturn(0); 1533 } 1534 for (link = RosWTableauList; link; link=link->next) { 1535 ierr = PetscStrcmp(link->tab.name,rostype,&match);CHKERRQ(ierr); 1536 if (match) { 1537 ierr = TSReset_RosW(ts);CHKERRQ(ierr); 1538 ros->tableau = &link->tab; 1539 PetscFunctionReturn(0); 1540 } 1541 } 1542 SETERRQ1(((PetscObject)ts)->comm,PETSC_ERR_ARG_UNKNOWN_TYPE,"Could not find '%s'",rostype); 1543 PetscFunctionReturn(0); 1544 } 1545 1546 #undef __FUNCT__ 1547 #define __FUNCT__ "TSRosWSetRecomputeJacobian_RosW" 1548 PetscErrorCode TSRosWSetRecomputeJacobian_RosW(TS ts,PetscBool flg) 1549 { 1550 TS_RosW *ros = (TS_RosW*)ts->data; 1551 1552 PetscFunctionBegin; 1553 ros->recompute_jacobian = flg; 1554 PetscFunctionReturn(0); 1555 } 1556 EXTERN_C_END 1557 1558 1559 /* ------------------------------------------------------------ */ 1560 /*MC 1561 TSROSW - ODE solver using Rosenbrock-W schemes 1562 1563 These methods are intended for problems with well-separated time scales, especially when a slow scale is strongly 1564 nonlinear such that it is expensive to solve with a fully implicit method. The user should provide the stiff part 1565 of the equation using TSSetIFunction() and the non-stiff part with TSSetRHSFunction(). 1566 1567 Notes: 1568 This method currently only works with autonomous ODE and DAE. 1569 1570 Developer notes: 1571 Rosenbrock-W methods are typically specified for autonomous ODE 1572 1573 $ xdot = f(x) 1574 1575 by the stage equations 1576 1577 $ k_i = h f(x_0 + sum_j alpha_ij k_j) + h J sum_j gamma_ij k_j 1578 1579 and step completion formula 1580 1581 $ x_1 = x_0 + sum_j b_j k_j 1582 1583 with step size h and coefficients alpha_ij, gamma_ij, and b_i. Implementing the method in this form would require f(x) 1584 and the Jacobian J to be available, in addition to the shifted matrix I - h gamma_ii J. Following Hairer and Wanner, 1585 we define new variables for the stage equations 1586 1587 $ y_i = gamma_ij k_j 1588 1589 The k_j can be recovered because Gamma is invertible. Let C be the lower triangular part of Gamma^{-1} and define 1590 1591 $ A = Alpha Gamma^{-1}, bt^T = b^T Gamma^{-i} 1592 1593 to rewrite the method as 1594 1595 $ [M/(h gamma_ii) - J] y_i = f(x_0 + sum_j a_ij y_j) + M sum_j (c_ij/h) y_j 1596 $ x_1 = x_0 + sum_j bt_j y_j 1597 1598 where we have introduced the mass matrix M. Continue by defining 1599 1600 $ ydot_i = 1/(h gamma_ii) y_i - sum_j (c_ij/h) y_j 1601 1602 or, more compactly in tensor notation 1603 1604 $ Ydot = 1/h (Gamma^{-1} \otimes I) Y . 1605 1606 Note that Gamma^{-1} is lower triangular. With this definition of Ydot in terms of known quantities and the current 1607 stage y_i, the stage equations reduce to performing one Newton step (typically with a lagged Jacobian) on the 1608 equation 1609 1610 $ g(x_0 + sum_j a_ij y_j + y_i, ydot_i) = 0 1611 1612 with initial guess y_i = 0. 1613 1614 Level: beginner 1615 1616 .seealso: TSCreate(), TS, TSSetType(), TSRosWSetType(), TSRosWRegister(), TSROSW2M, TSROSW2P, TSROSWRA3PW, TSROSWRA34PW2, TSROSWRODAS3, 1617 TSROSWSANDU3, TSROSWASSP3P3S1C, TSROSWLASSP3P4S2C, TSROSWLLSSP3P4S2C, TSROSWGRK4T, TSROSWSHAMP4, TSROSWVELDD4, TSROSW4L 1618 M*/ 1619 EXTERN_C_BEGIN 1620 #undef __FUNCT__ 1621 #define __FUNCT__ "TSCreate_RosW" 1622 PetscErrorCode TSCreate_RosW(TS ts) 1623 { 1624 TS_RosW *ros; 1625 PetscErrorCode ierr; 1626 1627 PetscFunctionBegin; 1628 #if !defined(PETSC_USE_DYNAMIC_LIBRARIES) 1629 ierr = TSRosWInitializePackage(PETSC_NULL);CHKERRQ(ierr); 1630 #endif 1631 1632 ts->ops->reset = TSReset_RosW; 1633 ts->ops->destroy = TSDestroy_RosW; 1634 ts->ops->view = TSView_RosW; 1635 ts->ops->setup = TSSetUp_RosW; 1636 ts->ops->step = TSStep_RosW; 1637 ts->ops->interpolate = TSInterpolate_RosW; 1638 ts->ops->evaluatestep = TSEvaluateStep_RosW; 1639 ts->ops->setfromoptions = TSSetFromOptions_RosW; 1640 ts->ops->snesfunction = SNESTSFormFunction_RosW; 1641 ts->ops->snesjacobian = SNESTSFormJacobian_RosW; 1642 1643 ierr = PetscNewLog(ts,TS_RosW,&ros);CHKERRQ(ierr); 1644 ts->data = (void*)ros; 1645 1646 ierr = PetscObjectComposeFunctionDynamic((PetscObject)ts,"TSRosWGetType_C","TSRosWGetType_RosW",TSRosWGetType_RosW);CHKERRQ(ierr); 1647 ierr = PetscObjectComposeFunctionDynamic((PetscObject)ts,"TSRosWSetType_C","TSRosWSetType_RosW",TSRosWSetType_RosW);CHKERRQ(ierr); 1648 ierr = PetscObjectComposeFunctionDynamic((PetscObject)ts,"TSRosWSetRecomputeJacobian_C","TSRosWSetRecomputeJacobian_RosW",TSRosWSetRecomputeJacobian_RosW);CHKERRQ(ierr); 1649 PetscFunctionReturn(0); 1650 } 1651 EXTERN_C_END 1652