1d0c080abSJoseph Pusztay #include <petsc/private/tsimpl.h> /*I "petscts.h" I*/ 2d0c080abSJoseph Pusztay #include <petscdm.h> 307eaae0cSMatthew G. Knepley #include <petscds.h> 4ab43fcacSJoe Pusztay #include <petscdmswarm.h> 5d0c080abSJoseph Pusztay #include <petscdraw.h> 6d0c080abSJoseph Pusztay 7d0c080abSJoseph Pusztay /*@C 8bcf0153eSBarry Smith TSMonitor - Runs all user-provided monitor routines set using `TSMonitorSet()` 9d0c080abSJoseph Pusztay 10c3339decSBarry Smith Collective 11d0c080abSJoseph Pusztay 12d0c080abSJoseph Pusztay Input Parameters: 13bcf0153eSBarry Smith + ts - time stepping context obtained from `TSCreate()` 14d0c080abSJoseph Pusztay . step - step number that has just completed 15d0c080abSJoseph Pusztay . ptime - model time of the state 16d0c080abSJoseph Pusztay - u - state at the current model time 17d0c080abSJoseph Pusztay 18bcf0153eSBarry Smith Level: developer 19bcf0153eSBarry Smith 20d0c080abSJoseph Pusztay Notes: 21bcf0153eSBarry Smith `TSMonitor()` is typically used automatically within the time stepping implementations. 22d0c080abSJoseph Pusztay Users would almost never call this routine directly. 23d0c080abSJoseph Pusztay 24d0c080abSJoseph Pusztay A step of -1 indicates that the monitor is being called on a solution obtained by interpolating from computed solutions 25d0c080abSJoseph Pusztay 26bcf0153eSBarry Smith .seealso: `TS`, `TSMonitorSet()`, `TSMonitorSetFromOptions()` 27d0c080abSJoseph Pusztay @*/ 28d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitor(TS ts, PetscInt step, PetscReal ptime, Vec u) 29d71ae5a4SJacob Faibussowitsch { 30d0c080abSJoseph Pusztay DM dm; 31d0c080abSJoseph Pusztay PetscInt i, n = ts->numbermonitors; 32d0c080abSJoseph Pusztay 33d0c080abSJoseph Pusztay PetscFunctionBegin; 34d0c080abSJoseph Pusztay PetscValidHeaderSpecific(ts, TS_CLASSID, 1); 35d0c080abSJoseph Pusztay PetscValidHeaderSpecific(u, VEC_CLASSID, 4); 36d0c080abSJoseph Pusztay 379566063dSJacob Faibussowitsch PetscCall(TSGetDM(ts, &dm)); 389566063dSJacob Faibussowitsch PetscCall(DMSetOutputSequenceNumber(dm, step, ptime)); 39d0c080abSJoseph Pusztay 409566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(u)); 4148a46eb9SPierre Jolivet for (i = 0; i < n; i++) PetscCall((*ts->monitor[i])(ts, step, ptime, u, ts->monitorcontext[i])); 429566063dSJacob Faibussowitsch PetscCall(VecLockReadPop(u)); 433ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 44d0c080abSJoseph Pusztay } 45d0c080abSJoseph Pusztay 46d0c080abSJoseph Pusztay /*@C 47d0c080abSJoseph Pusztay TSMonitorSetFromOptions - Sets a monitor function and viewer appropriate for the type indicated by the user 48d0c080abSJoseph Pusztay 49c3339decSBarry Smith Collective 50d0c080abSJoseph Pusztay 51d0c080abSJoseph Pusztay Input Parameters: 52bcf0153eSBarry Smith + ts - `TS` object you wish to monitor 53d0c080abSJoseph Pusztay . name - the monitor type one is seeking 54d0c080abSJoseph Pusztay . help - message indicating what monitoring is done 55d0c080abSJoseph Pusztay . manual - manual page for the monitor 56*49abdd8aSBarry Smith . monitor - the monitor function, this must use a `PetscViewerFormat` as its context 57bcf0153eSBarry Smith - monitorsetup - a function that is called once ONLY if the user selected this monitor that may set additional features of the `TS` or `PetscViewer` objects 58d0c080abSJoseph Pusztay 59d0c080abSJoseph Pusztay Level: developer 60d0c080abSJoseph Pusztay 61648c30bcSBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `PetscOptionsCreateViewer()`, `PetscOptionsGetReal()`, `PetscOptionsHasName()`, `PetscOptionsGetString()`, 62db781477SPatrick Sanan `PetscOptionsGetIntArray()`, `PetscOptionsGetRealArray()`, `PetscOptionsBool()` 63b43aa488SJacob Faibussowitsch `PetscOptionsInt()`, `PetscOptionsString()`, `PetscOptionsReal()`, 64db781477SPatrick Sanan `PetscOptionsName()`, `PetscOptionsBegin()`, `PetscOptionsEnd()`, `PetscOptionsHeadBegin()`, 65c2e3fba1SPatrick Sanan `PetscOptionsStringArray()`, `PetscOptionsRealArray()`, `PetscOptionsScalar()`, 66db781477SPatrick Sanan `PetscOptionsBoolGroupBegin()`, `PetscOptionsBoolGroup()`, `PetscOptionsBoolGroupEnd()`, 67db781477SPatrick Sanan `PetscOptionsFList()`, `PetscOptionsEList()` 68d0c080abSJoseph Pusztay @*/ 69d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorSetFromOptions(TS ts, const char name[], const char help[], const char manual[], PetscErrorCode (*monitor)(TS, PetscInt, PetscReal, Vec, PetscViewerAndFormat *), PetscErrorCode (*monitorsetup)(TS, PetscViewerAndFormat *)) 70d71ae5a4SJacob Faibussowitsch { 71d0c080abSJoseph Pusztay PetscViewer viewer; 72d0c080abSJoseph Pusztay PetscViewerFormat format; 73d0c080abSJoseph Pusztay PetscBool flg; 74d0c080abSJoseph Pusztay 75d0c080abSJoseph Pusztay PetscFunctionBegin; 76648c30bcSBarry Smith PetscCall(PetscOptionsCreateViewer(PetscObjectComm((PetscObject)ts), ((PetscObject)ts)->options, ((PetscObject)ts)->prefix, name, &viewer, &format, &flg)); 77d0c080abSJoseph Pusztay if (flg) { 78d0c080abSJoseph Pusztay PetscViewerAndFormat *vf; 799812b6beSJed Brown char interval_key[1024]; 80c17ba870SStefano Zampini 819812b6beSJed Brown PetscCall(PetscSNPrintf(interval_key, sizeof interval_key, "%s_interval", name)); 82c17ba870SStefano Zampini PetscCall(PetscViewerAndFormatCreate(viewer, format, &vf)); 83c17ba870SStefano Zampini vf->view_interval = 1; 849812b6beSJed Brown PetscCall(PetscOptionsGetInt(((PetscObject)ts)->options, ((PetscObject)ts)->prefix, interval_key, &vf->view_interval, NULL)); 85648c30bcSBarry Smith PetscCall(PetscViewerDestroy(&viewer)); 861baa6e33SBarry Smith if (monitorsetup) PetscCall((*monitorsetup)(ts, vf)); 87*49abdd8aSBarry Smith PetscCall(TSMonitorSet(ts, (PetscErrorCode (*)(TS, PetscInt, PetscReal, Vec, void *))monitor, vf, (PetscCtxDestroyFn *)PetscViewerAndFormatDestroy)); 88d0c080abSJoseph Pusztay } 893ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 90d0c080abSJoseph Pusztay } 91d0c080abSJoseph Pusztay 92d0c080abSJoseph Pusztay /*@C 93d0c080abSJoseph Pusztay TSMonitorSet - Sets an ADDITIONAL function that is to be used at every 94d0c080abSJoseph Pusztay timestep to display the iteration's progress. 95d0c080abSJoseph Pusztay 96c3339decSBarry Smith Logically Collective 97d0c080abSJoseph Pusztay 98d0c080abSJoseph Pusztay Input Parameters: 99bcf0153eSBarry Smith + ts - the `TS` context obtained from `TSCreate()` 100d0c080abSJoseph Pusztay . monitor - monitoring routine 101195e9b02SBarry Smith . mctx - [optional] user-defined context for private data for the monitor routine (use `NULL` if no context is desired) 102*49abdd8aSBarry Smith - mdestroy - [optional] routine that frees monitor context (may be `NULL`), see `PetscCtxDestroyFn` for the calling sequence 103d0c080abSJoseph Pusztay 10420f4b53cSBarry Smith Calling sequence of `monitor`: 10520f4b53cSBarry Smith + ts - the `TS` context 106d0c080abSJoseph Pusztay . steps - iteration number (after the final time step the monitor routine may be called with a step of -1, this indicates the solution has been interpolated to this time) 107d0c080abSJoseph Pusztay . time - current time 108d0c080abSJoseph Pusztay . u - current iterate 10914d0ab18SJacob Faibussowitsch - ctx - [optional] monitoring context 110d0c080abSJoseph Pusztay 111bcf0153eSBarry Smith Level: intermediate 112bcf0153eSBarry Smith 113bcf0153eSBarry Smith Note: 114195e9b02SBarry Smith This routine adds an additional monitor to the list of monitors that already has been loaded. 115d0c080abSJoseph Pusztay 116b43aa488SJacob Faibussowitsch Fortran Notes: 117bcf0153eSBarry Smith Only a single monitor function can be set for each `TS` object 118d0c080abSJoseph Pusztay 1191cc06b55SBarry Smith .seealso: [](ch_ts), `TSMonitorDefault()`, `TSMonitorCancel()`, `TSDMSwarmMonitorMoments()`, `TSMonitorExtreme()`, `TSMonitorDrawSolution()`, 1203a61192cSBarry Smith `TSMonitorDrawSolutionPhase()`, `TSMonitorDrawSolutionFunction()`, `TSMonitorDrawError()`, `TSMonitorSolution()`, `TSMonitorSolutionVTK()`, 121*49abdd8aSBarry Smith `TSMonitorLGSolution()`, `TSMonitorLGError()`, `TSMonitorSPSwarmSolution()`, `TSMonitorError()`, `TSMonitorEnvelope()`, `PetscCtxDestroyFn` 122d0c080abSJoseph Pusztay @*/ 123*49abdd8aSBarry Smith PetscErrorCode TSMonitorSet(TS ts, PetscErrorCode (*monitor)(TS ts, PetscInt steps, PetscReal time, Vec u, void *ctx), void *mctx, PetscCtxDestroyFn *mdestroy) 124d71ae5a4SJacob Faibussowitsch { 125d0c080abSJoseph Pusztay PetscInt i; 126d0c080abSJoseph Pusztay PetscBool identical; 127d0c080abSJoseph Pusztay 128d0c080abSJoseph Pusztay PetscFunctionBegin; 129d0c080abSJoseph Pusztay PetscValidHeaderSpecific(ts, TS_CLASSID, 1); 130d0c080abSJoseph Pusztay for (i = 0; i < ts->numbermonitors; i++) { 1319566063dSJacob Faibussowitsch PetscCall(PetscMonitorCompare((PetscErrorCode (*)(void))monitor, mctx, mdestroy, (PetscErrorCode (*)(void))ts->monitor[i], ts->monitorcontext[i], ts->monitordestroy[i], &identical)); 1323ba16761SJacob Faibussowitsch if (identical) PetscFunctionReturn(PETSC_SUCCESS); 133d0c080abSJoseph Pusztay } 1343c633725SBarry Smith PetscCheck(ts->numbermonitors < MAXTSMONITORS, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Too many monitors set"); 135d0c080abSJoseph Pusztay ts->monitor[ts->numbermonitors] = monitor; 136d0c080abSJoseph Pusztay ts->monitordestroy[ts->numbermonitors] = mdestroy; 137d0c080abSJoseph Pusztay ts->monitorcontext[ts->numbermonitors++] = (void *)mctx; 1383ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 139d0c080abSJoseph Pusztay } 140d0c080abSJoseph Pusztay 141d0c080abSJoseph Pusztay /*@C 142d0c080abSJoseph Pusztay TSMonitorCancel - Clears all the monitors that have been set on a time-step object. 143d0c080abSJoseph Pusztay 144c3339decSBarry Smith Logically Collective 145d0c080abSJoseph Pusztay 1462fe279fdSBarry Smith Input Parameter: 147bcf0153eSBarry Smith . ts - the `TS` context obtained from `TSCreate()` 148d0c080abSJoseph Pusztay 149d0c080abSJoseph Pusztay Level: intermediate 150d0c080abSJoseph Pusztay 151bcf0153eSBarry Smith Note: 152bcf0153eSBarry Smith There is no way to remove a single, specific monitor. 153bcf0153eSBarry Smith 1541cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorDefault()`, `TSMonitorSet()` 155d0c080abSJoseph Pusztay @*/ 156d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorCancel(TS ts) 157d71ae5a4SJacob Faibussowitsch { 158d0c080abSJoseph Pusztay PetscInt i; 159d0c080abSJoseph Pusztay 160d0c080abSJoseph Pusztay PetscFunctionBegin; 161d0c080abSJoseph Pusztay PetscValidHeaderSpecific(ts, TS_CLASSID, 1); 162d0c080abSJoseph Pusztay for (i = 0; i < ts->numbermonitors; i++) { 16348a46eb9SPierre Jolivet if (ts->monitordestroy[i]) PetscCall((*ts->monitordestroy[i])(&ts->monitorcontext[i])); 164d0c080abSJoseph Pusztay } 165d0c080abSJoseph Pusztay ts->numbermonitors = 0; 1663ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 167d0c080abSJoseph Pusztay } 168d0c080abSJoseph Pusztay 169d0c080abSJoseph Pusztay /*@C 170195e9b02SBarry Smith TSMonitorDefault - The default monitor, prints the timestep and time for each step 171d0c080abSJoseph Pusztay 17214d0ab18SJacob Faibussowitsch Input Parameters: 17314d0ab18SJacob Faibussowitsch + ts - the `TS` context 17414d0ab18SJacob Faibussowitsch . step - iteration number (after the final time step the monitor routine may be called with a step of -1, this indicates the solution has been interpolated to this time) 17514d0ab18SJacob Faibussowitsch . ptime - current time 17614d0ab18SJacob Faibussowitsch . v - current iterate 17714d0ab18SJacob Faibussowitsch - vf - the viewer and format 17814d0ab18SJacob Faibussowitsch 179bcf0153eSBarry Smith Options Database Key: 1803a61192cSBarry Smith . -ts_monitor - monitors the time integration 1813a61192cSBarry Smith 182d0c080abSJoseph Pusztay Level: intermediate 183d0c080abSJoseph Pusztay 184bcf0153eSBarry Smith Notes: 185bcf0153eSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 186bcf0153eSBarry Smith to be used during the `TS` integration. 187bcf0153eSBarry Smith 1881cc06b55SBarry Smith .seealso: [](ch_ts), `TSMonitorSet()`, `TSDMSwarmMonitorMoments()`, `TSMonitorExtreme()`, `TSMonitorDrawSolution()`, 1893a61192cSBarry Smith `TSMonitorDrawSolutionPhase()`, `TSMonitorDrawSolutionFunction()`, `TSMonitorDrawError()`, `TSMonitorSolution()`, `TSMonitorSolutionVTK()`, 190b43aa488SJacob Faibussowitsch `TSMonitorLGSolution()`, `TSMonitorLGError()`, `TSMonitorSPSwarmSolution()`, `TSMonitorError()`, `TSMonitorEnvelope()` 191d0c080abSJoseph Pusztay @*/ 192d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDefault(TS ts, PetscInt step, PetscReal ptime, Vec v, PetscViewerAndFormat *vf) 193d71ae5a4SJacob Faibussowitsch { 194d0c080abSJoseph Pusztay PetscViewer viewer = vf->viewer; 195d0c080abSJoseph Pusztay PetscBool iascii, ibinary; 196d0c080abSJoseph Pusztay 197d0c080abSJoseph Pusztay PetscFunctionBegin; 198064a246eSJacob Faibussowitsch PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 5); 1999566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 2009566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &ibinary)); 2019566063dSJacob Faibussowitsch PetscCall(PetscViewerPushFormat(viewer, vf->format)); 202d0c080abSJoseph Pusztay if (iascii) { 2039566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIAddTab(viewer, ((PetscObject)ts)->tablevel)); 204d0c080abSJoseph Pusztay if (step == -1) { /* this indicates it is an interpolated solution */ 20563a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Interpolated solution at time %g between steps %" PetscInt_FMT " and %" PetscInt_FMT "\n", (double)ptime, ts->steps - 1, ts->steps)); 206d0c080abSJoseph Pusztay } else { 20763a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "%" PetscInt_FMT " TS dt %g time %g%s", step, (double)ts->time_step, (double)ptime, ts->steprollback ? " (r)\n" : "\n")); 208d0c080abSJoseph Pusztay } 2099566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIISubtractTab(viewer, ((PetscObject)ts)->tablevel)); 210d0c080abSJoseph Pusztay } else if (ibinary) { 211d0c080abSJoseph Pusztay PetscMPIInt rank; 2129566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)viewer), &rank)); 213c5853193SPierre Jolivet if (rank == 0) { 214d0c080abSJoseph Pusztay PetscBool skipHeader; 215d0c080abSJoseph Pusztay PetscInt classid = REAL_FILE_CLASSID; 216d0c080abSJoseph Pusztay 2179566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryGetSkipHeader(viewer, &skipHeader)); 21848a46eb9SPierre Jolivet if (!skipHeader) PetscCall(PetscViewerBinaryWrite(viewer, &classid, 1, PETSC_INT)); 2199566063dSJacob Faibussowitsch PetscCall(PetscRealView(1, &ptime, viewer)); 220d0c080abSJoseph Pusztay } else { 2219566063dSJacob Faibussowitsch PetscCall(PetscRealView(0, &ptime, viewer)); 222d0c080abSJoseph Pusztay } 223d0c080abSJoseph Pusztay } 2249566063dSJacob Faibussowitsch PetscCall(PetscViewerPopFormat(viewer)); 2253ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 226d0c080abSJoseph Pusztay } 227d0c080abSJoseph Pusztay 228d0c080abSJoseph Pusztay /*@C 229d0c080abSJoseph Pusztay TSMonitorExtreme - Prints the extreme values of the solution at each timestep 230d0c080abSJoseph Pusztay 23114d0ab18SJacob Faibussowitsch Input Parameters: 23214d0ab18SJacob Faibussowitsch + ts - the `TS` context 23314d0ab18SJacob Faibussowitsch . step - iteration number (after the final time step the monitor routine may be called with a step of -1, this indicates the solution has been interpolated to this time) 23414d0ab18SJacob Faibussowitsch . ptime - current time 23514d0ab18SJacob Faibussowitsch . v - current iterate 23614d0ab18SJacob Faibussowitsch - vf - the viewer and format 23714d0ab18SJacob Faibussowitsch 238bcf0153eSBarry Smith Level: intermediate 239bcf0153eSBarry Smith 240195e9b02SBarry Smith Note: 2413a61192cSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 242195e9b02SBarry Smith to be used during the `TS` integration. 2433a61192cSBarry Smith 2441cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()` 245d0c080abSJoseph Pusztay @*/ 246d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorExtreme(TS ts, PetscInt step, PetscReal ptime, Vec v, PetscViewerAndFormat *vf) 247d71ae5a4SJacob Faibussowitsch { 248d0c080abSJoseph Pusztay PetscViewer viewer = vf->viewer; 249d0c080abSJoseph Pusztay PetscBool iascii; 250d0c080abSJoseph Pusztay PetscReal max, min; 251d0c080abSJoseph Pusztay 252d0c080abSJoseph Pusztay PetscFunctionBegin; 253064a246eSJacob Faibussowitsch PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 5); 2549566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 2559566063dSJacob Faibussowitsch PetscCall(PetscViewerPushFormat(viewer, vf->format)); 256d0c080abSJoseph Pusztay if (iascii) { 2579566063dSJacob Faibussowitsch PetscCall(VecMax(v, NULL, &max)); 2589566063dSJacob Faibussowitsch PetscCall(VecMin(v, NULL, &min)); 2599566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIAddTab(viewer, ((PetscObject)ts)->tablevel)); 26063a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "%" PetscInt_FMT " TS dt %g time %g%s max %g min %g\n", step, (double)ts->time_step, (double)ptime, ts->steprollback ? " (r)" : "", (double)max, (double)min)); 2619566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIISubtractTab(viewer, ((PetscObject)ts)->tablevel)); 262d0c080abSJoseph Pusztay } 2639566063dSJacob Faibussowitsch PetscCall(PetscViewerPopFormat(viewer)); 2643ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 265d0c080abSJoseph Pusztay } 266d0c080abSJoseph Pusztay 267d0c080abSJoseph Pusztay /*@C 268bcf0153eSBarry Smith TSMonitorLGCtxCreate - Creates a `TSMonitorLGCtx` context for use with 269bcf0153eSBarry Smith `TS` to monitor the solution process graphically in various ways 270d0c080abSJoseph Pusztay 271c3339decSBarry Smith Collective 272d0c080abSJoseph Pusztay 273d0c080abSJoseph Pusztay Input Parameters: 27414d0ab18SJacob Faibussowitsch + comm - the MPI communicator to use 27514d0ab18SJacob Faibussowitsch . host - the X display to open, or `NULL` for the local machine 276d0c080abSJoseph Pusztay . label - the title to put in the title bar 27714d0ab18SJacob Faibussowitsch . x - the x screen coordinates of the upper left coordinate of the window 27814d0ab18SJacob Faibussowitsch . y - the y screen coordinates of the upper left coordinate of the window 27914d0ab18SJacob Faibussowitsch . m - the screen width in pixels 28014d0ab18SJacob Faibussowitsch . n - the screen height in pixels 281d0c080abSJoseph Pusztay - howoften - if positive then determines the frequency of the plotting, if -1 then only at the final time 282d0c080abSJoseph Pusztay 283d0c080abSJoseph Pusztay Output Parameter: 284d0c080abSJoseph Pusztay . ctx - the context 285d0c080abSJoseph Pusztay 286bcf0153eSBarry Smith Options Database Keys: 287d0c080abSJoseph Pusztay + -ts_monitor_lg_timestep - automatically sets line graph monitor 288b43aa488SJacob Faibussowitsch . -ts_monitor_lg_timestep_log - automatically sets line graph monitor 289bcf0153eSBarry Smith . -ts_monitor_lg_solution - monitor the solution (or certain values of the solution by calling `TSMonitorLGSetDisplayVariables()` or `TSMonitorLGCtxSetDisplayVariables()`) 290d0c080abSJoseph Pusztay . -ts_monitor_lg_error - monitor the error 291bcf0153eSBarry Smith . -ts_monitor_lg_ksp_iterations - monitor the number of `KSP` iterations needed for each timestep 292bcf0153eSBarry Smith . -ts_monitor_lg_snes_iterations - monitor the number of `SNES` iterations needed for each timestep 293d0c080abSJoseph Pusztay - -lg_use_markers <true,false> - mark the data points (at each time step) on the plot; default is true 294d0c080abSJoseph Pusztay 295d0c080abSJoseph Pusztay Level: intermediate 296d0c080abSJoseph Pusztay 297bcf0153eSBarry Smith Notes: 298bcf0153eSBarry Smith Pass the context and `TSMonitorLGCtxDestroy()` to `TSMonitorSet()` to have the context destroyed when no longer needed. 299bcf0153eSBarry Smith 300bcf0153eSBarry Smith One can provide a function that transforms the solution before plotting it with `TSMonitorLGCtxSetTransform()` or `TSMonitorLGSetTransform()` 301bcf0153eSBarry Smith 3021d27aa22SBarry Smith Many of the functions that control the monitoring have two forms\: TSMonitorLGSet/GetXXXX() and TSMonitorLGCtxSet/GetXXXX() the first take a `TS` object as the 303bcf0153eSBarry Smith first argument (if that `TS` object does not have a `TSMonitorLGCtx` associated with it the function call is ignored) and the second takes a `TSMonitorLGCtx` object 304bcf0153eSBarry Smith as the first argument. 305bcf0153eSBarry Smith 306bcf0153eSBarry Smith One can control the names displayed for each solution or error variable with `TSMonitorLGCtxSetVariableNames()` or `TSMonitorLGSetVariableNames()` 307bcf0153eSBarry Smith 3081cc06b55SBarry Smith .seealso: [](ch_ts), `TSMonitorLGTimeStep()`, `TSMonitorSet()`, `TSMonitorLGSolution()`, `TSMonitorLGError()`, `TSMonitorDefault()`, `VecView()`, 30942747ad1SJacob Faibussowitsch `TSMonitorLGCtxSetVariableNames()`, `TSMonitorLGCtxGetVariableNames()`, 310db781477SPatrick Sanan `TSMonitorLGSetVariableNames()`, `TSMonitorLGGetVariableNames()`, `TSMonitorLGSetDisplayVariables()`, `TSMonitorLGCtxSetDisplayVariables()`, 311b43aa488SJacob Faibussowitsch `TSMonitorLGCtxSetTransform()`, `TSMonitorLGSetTransform()`, `TSMonitorLGSNESIterations()`, `TSMonitorLGKSPIterations()`, 312db781477SPatrick Sanan `TSMonitorEnvelopeCtxCreate()`, `TSMonitorEnvelopeGetBounds()`, `TSMonitorEnvelopeCtxDestroy()`, `TSMonitorEnvelop()` 313d0c080abSJoseph Pusztay @*/ 314d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGCtxCreate(MPI_Comm comm, const char host[], const char label[], int x, int y, int m, int n, PetscInt howoften, TSMonitorLGCtx *ctx) 315d71ae5a4SJacob Faibussowitsch { 316d0c080abSJoseph Pusztay PetscDraw draw; 317d0c080abSJoseph Pusztay 318d0c080abSJoseph Pusztay PetscFunctionBegin; 3199566063dSJacob Faibussowitsch PetscCall(PetscNew(ctx)); 3209566063dSJacob Faibussowitsch PetscCall(PetscDrawCreate(comm, host, label, x, y, m, n, &draw)); 3219566063dSJacob Faibussowitsch PetscCall(PetscDrawSetFromOptions(draw)); 3229566063dSJacob Faibussowitsch PetscCall(PetscDrawLGCreate(draw, 1, &(*ctx)->lg)); 3239566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSetFromOptions((*ctx)->lg)); 3249566063dSJacob Faibussowitsch PetscCall(PetscDrawDestroy(&draw)); 325d0c080abSJoseph Pusztay (*ctx)->howoften = howoften; 3263ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 327d0c080abSJoseph Pusztay } 328d0c080abSJoseph Pusztay 329a54bb2a9SBarry Smith /*@C 330a54bb2a9SBarry Smith TSMonitorLGTimeStep - Monitors a `TS` by printing the time-steps 331a54bb2a9SBarry Smith 332a54bb2a9SBarry Smith Collective 333a54bb2a9SBarry Smith 334a54bb2a9SBarry Smith Input Parameters: 335a54bb2a9SBarry Smith + ts - the time integrator 336a54bb2a9SBarry Smith . step - the current time step 337a54bb2a9SBarry Smith . ptime - the current time 338a54bb2a9SBarry Smith . v - the current state 339a54bb2a9SBarry Smith - monctx - the monitor context obtained with `TSMonitorLGCtxCreate()` 340a54bb2a9SBarry Smith 341a54bb2a9SBarry Smith Level: advanced 342a54bb2a9SBarry Smith 343a54bb2a9SBarry Smith Note: 344a54bb2a9SBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()` along the `ctx` created by `TSMonitorLGCtxCreate()` 345a54bb2a9SBarry Smith and `TSMonitorLGCtxDestroy()` 346a54bb2a9SBarry Smith 347a54bb2a9SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorLGCtxCreate()`, `TSMonitorSet()`, `TSMonitorLGCtxDestroy()` 348a54bb2a9SBarry Smith @*/ 349d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGTimeStep(TS ts, PetscInt step, PetscReal ptime, Vec v, void *monctx) 350d71ae5a4SJacob Faibussowitsch { 351d0c080abSJoseph Pusztay TSMonitorLGCtx ctx = (TSMonitorLGCtx)monctx; 352d0c080abSJoseph Pusztay PetscReal x = ptime, y; 353d0c080abSJoseph Pusztay 354d0c080abSJoseph Pusztay PetscFunctionBegin; 3553ba16761SJacob Faibussowitsch if (step < 0) PetscFunctionReturn(PETSC_SUCCESS); /* -1 indicates an interpolated solution */ 356d0c080abSJoseph Pusztay if (!step) { 357d0c080abSJoseph Pusztay PetscDrawAxis axis; 358d0c080abSJoseph Pusztay const char *ylabel = ctx->semilogy ? "Log Time Step" : "Time Step"; 3599566063dSJacob Faibussowitsch PetscCall(PetscDrawLGGetAxis(ctx->lg, &axis)); 3609566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisSetLabels(axis, "Timestep as function of time", "Time", ylabel)); 3619566063dSJacob Faibussowitsch PetscCall(PetscDrawLGReset(ctx->lg)); 362d0c080abSJoseph Pusztay } 3639566063dSJacob Faibussowitsch PetscCall(TSGetTimeStep(ts, &y)); 364d0c080abSJoseph Pusztay if (ctx->semilogy) y = PetscLog10Real(y); 3659566063dSJacob Faibussowitsch PetscCall(PetscDrawLGAddPoint(ctx->lg, &x, &y)); 366d0c080abSJoseph Pusztay if (((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason)) { 3679566063dSJacob Faibussowitsch PetscCall(PetscDrawLGDraw(ctx->lg)); 3689566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSave(ctx->lg)); 369d0c080abSJoseph Pusztay } 3703ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 371d0c080abSJoseph Pusztay } 372d0c080abSJoseph Pusztay 373d0c080abSJoseph Pusztay /*@C 374195e9b02SBarry Smith TSMonitorLGCtxDestroy - Destroys a line graph context that was created with `TSMonitorLGCtxCreate()`. 375d0c080abSJoseph Pusztay 376c3339decSBarry Smith Collective 377d0c080abSJoseph Pusztay 378d0c080abSJoseph Pusztay Input Parameter: 379d0c080abSJoseph Pusztay . ctx - the monitor context 380d0c080abSJoseph Pusztay 381d0c080abSJoseph Pusztay Level: intermediate 382d0c080abSJoseph Pusztay 383bcf0153eSBarry Smith Note: 384bcf0153eSBarry Smith Pass to `TSMonitorSet()` along with the context and `TSMonitorLGTimeStep()` 385bcf0153eSBarry Smith 386a54bb2a9SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorLGCtxCreate()`, `TSMonitorSet()`, `TSMonitorLGTimeStep()` 387d0c080abSJoseph Pusztay @*/ 388d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGCtxDestroy(TSMonitorLGCtx *ctx) 389d71ae5a4SJacob Faibussowitsch { 390d0c080abSJoseph Pusztay PetscFunctionBegin; 391*49abdd8aSBarry Smith if ((*ctx)->transformdestroy) PetscCall(((*ctx)->transformdestroy)((void **)&(*ctx)->transformctx)); 3929566063dSJacob Faibussowitsch PetscCall(PetscDrawLGDestroy(&(*ctx)->lg)); 3939566063dSJacob Faibussowitsch PetscCall(PetscStrArrayDestroy(&(*ctx)->names)); 3949566063dSJacob Faibussowitsch PetscCall(PetscStrArrayDestroy(&(*ctx)->displaynames)); 3959566063dSJacob Faibussowitsch PetscCall(PetscFree((*ctx)->displayvariables)); 3969566063dSJacob Faibussowitsch PetscCall(PetscFree((*ctx)->displayvalues)); 3979566063dSJacob Faibussowitsch PetscCall(PetscFree(*ctx)); 3983ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 399d0c080abSJoseph Pusztay } 400d0c080abSJoseph Pusztay 401d7462660SMatthew Knepley /* Creates a TSMonitorSPCtx for use with DMSwarm particle visualizations */ 40260e16b1bSMatthew G. Knepley PetscErrorCode TSMonitorSPCtxCreate(MPI_Comm comm, const char host[], const char label[], int x, int y, int m, int n, PetscInt howoften, PetscInt retain, PetscBool phase, PetscBool multispecies, TSMonitorSPCtx *ctx) 403d71ae5a4SJacob Faibussowitsch { 404d0c080abSJoseph Pusztay PetscDraw draw; 405d0c080abSJoseph Pusztay 406d0c080abSJoseph Pusztay PetscFunctionBegin; 4079566063dSJacob Faibussowitsch PetscCall(PetscNew(ctx)); 4089566063dSJacob Faibussowitsch PetscCall(PetscDrawCreate(comm, host, label, x, y, m, n, &draw)); 4099566063dSJacob Faibussowitsch PetscCall(PetscDrawSetFromOptions(draw)); 4109566063dSJacob Faibussowitsch PetscCall(PetscDrawSPCreate(draw, 1, &(*ctx)->sp)); 4119566063dSJacob Faibussowitsch PetscCall(PetscDrawDestroy(&draw)); 412d0c080abSJoseph Pusztay (*ctx)->howoften = howoften; 413d7462660SMatthew Knepley (*ctx)->retain = retain; 414d7462660SMatthew Knepley (*ctx)->phase = phase; 41560e16b1bSMatthew G. Knepley (*ctx)->multispecies = multispecies; 4163ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 417d0c080abSJoseph Pusztay } 418d0c080abSJoseph Pusztay 41960e16b1bSMatthew G. Knepley /* Destroys a TSMonitorSPCtx that was created with TSMonitorSPCtxCreate */ 420d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorSPCtxDestroy(TSMonitorSPCtx *ctx) 421d71ae5a4SJacob Faibussowitsch { 422d0c080abSJoseph Pusztay PetscFunctionBegin; 4239566063dSJacob Faibussowitsch PetscCall(PetscDrawSPDestroy(&(*ctx)->sp)); 4249566063dSJacob Faibussowitsch PetscCall(PetscFree(*ctx)); 42560e16b1bSMatthew G. Knepley PetscFunctionReturn(PETSC_SUCCESS); 42660e16b1bSMatthew G. Knepley } 427d0c080abSJoseph Pusztay 42860e16b1bSMatthew G. Knepley /* Creates a TSMonitorHGCtx for use with DMSwarm particle visualizations */ 42960e16b1bSMatthew G. Knepley PetscErrorCode TSMonitorHGCtxCreate(MPI_Comm comm, const char host[], const char label[], int x, int y, int m, int n, PetscInt howoften, PetscInt Ns, PetscInt Nb, PetscBool velocity, TSMonitorHGCtx *ctx) 43060e16b1bSMatthew G. Knepley { 43160e16b1bSMatthew G. Knepley PetscDraw draw; 43260e16b1bSMatthew G. Knepley PetscInt s; 43360e16b1bSMatthew G. Knepley 43460e16b1bSMatthew G. Knepley PetscFunctionBegin; 43560e16b1bSMatthew G. Knepley PetscCall(PetscNew(ctx)); 43660e16b1bSMatthew G. Knepley PetscCall(PetscMalloc1(Ns, &(*ctx)->hg)); 43760e16b1bSMatthew G. Knepley for (s = 0; s < Ns; ++s) { 4386497c311SBarry Smith PetscCall(PetscDrawCreate(comm, host, label, (int)(x + s * m), y, m, n, &draw)); 43960e16b1bSMatthew G. Knepley PetscCall(PetscDrawSetFromOptions(draw)); 4406497c311SBarry Smith PetscCall(PetscDrawHGCreate(draw, (int)Nb, &(*ctx)->hg[s])); 44160e16b1bSMatthew G. Knepley PetscCall(PetscDrawHGCalcStats((*ctx)->hg[s], PETSC_TRUE)); 44260e16b1bSMatthew G. Knepley PetscCall(PetscDrawDestroy(&draw)); 44360e16b1bSMatthew G. Knepley } 44460e16b1bSMatthew G. Knepley (*ctx)->howoften = howoften; 44560e16b1bSMatthew G. Knepley (*ctx)->Ns = Ns; 44660e16b1bSMatthew G. Knepley (*ctx)->velocity = velocity; 44760e16b1bSMatthew G. Knepley PetscFunctionReturn(PETSC_SUCCESS); 44860e16b1bSMatthew G. Knepley } 44960e16b1bSMatthew G. Knepley 45060e16b1bSMatthew G. Knepley /* Destroys a TSMonitorHGCtx that was created with TSMonitorHGCtxCreate */ 45160e16b1bSMatthew G. Knepley PetscErrorCode TSMonitorHGCtxDestroy(TSMonitorHGCtx *ctx) 45260e16b1bSMatthew G. Knepley { 45360e16b1bSMatthew G. Knepley PetscInt s; 45460e16b1bSMatthew G. Knepley 45560e16b1bSMatthew G. Knepley PetscFunctionBegin; 45660e16b1bSMatthew G. Knepley for (s = 0; s < (*ctx)->Ns; ++s) PetscCall(PetscDrawHGDestroy(&(*ctx)->hg[s])); 45760e16b1bSMatthew G. Knepley PetscCall(PetscFree((*ctx)->hg)); 45860e16b1bSMatthew G. Knepley PetscCall(PetscFree(*ctx)); 4593ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 460d0c080abSJoseph Pusztay } 461d0c080abSJoseph Pusztay 462d0c080abSJoseph Pusztay /*@C 463bcf0153eSBarry Smith TSMonitorDrawSolution - Monitors progress of the `TS` solvers by calling 464bcf0153eSBarry Smith `VecView()` for the solution at each timestep 465d0c080abSJoseph Pusztay 466c3339decSBarry Smith Collective 467d0c080abSJoseph Pusztay 468d0c080abSJoseph Pusztay Input Parameters: 469bcf0153eSBarry Smith + ts - the `TS` context 470d0c080abSJoseph Pusztay . step - current time-step 471d0c080abSJoseph Pusztay . ptime - current time 47214d0ab18SJacob Faibussowitsch . u - the solution at the current time 473195e9b02SBarry Smith - dummy - either a viewer or `NULL` 474d0c080abSJoseph Pusztay 475bcf0153eSBarry Smith Options Database Keys: 476bcf0153eSBarry Smith + -ts_monitor_draw_solution - draw the solution at each time-step 477bcf0153eSBarry Smith - -ts_monitor_draw_solution_initial - show initial solution as well as current solution 478bcf0153eSBarry Smith 479bcf0153eSBarry Smith Level: intermediate 480d0c080abSJoseph Pusztay 481d0c080abSJoseph Pusztay Notes: 482195e9b02SBarry Smith The initial solution and current solution are not displayed with a common axis scaling so generally the option `-ts_monitor_draw_solution_initial` 483d0c080abSJoseph Pusztay will look bad 484d0c080abSJoseph Pusztay 485bcf0153eSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, as well as the context created with 486bcf0153eSBarry Smith `TSMonitorDrawCtxCreate()` and the function `TSMonitorDrawCtxDestroy()` to cause the monitor to be used during the `TS` integration. 4873a61192cSBarry Smith 4881cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorDrawCtxCreate()`, `TSMonitorDrawCtxDestroy()` 489d0c080abSJoseph Pusztay @*/ 490d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDrawSolution(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dummy) 491d71ae5a4SJacob Faibussowitsch { 492d0c080abSJoseph Pusztay TSMonitorDrawCtx ictx = (TSMonitorDrawCtx)dummy; 493d0c080abSJoseph Pusztay PetscDraw draw; 494d0c080abSJoseph Pusztay 495d0c080abSJoseph Pusztay PetscFunctionBegin; 496d0c080abSJoseph Pusztay if (!step && ictx->showinitial) { 49748a46eb9SPierre Jolivet if (!ictx->initialsolution) PetscCall(VecDuplicate(u, &ictx->initialsolution)); 4989566063dSJacob Faibussowitsch PetscCall(VecCopy(u, ictx->initialsolution)); 499d0c080abSJoseph Pusztay } 5003ba16761SJacob Faibussowitsch if (!(((ictx->howoften > 0) && (!(step % ictx->howoften))) || ((ictx->howoften == -1) && ts->reason))) PetscFunctionReturn(PETSC_SUCCESS); 501d0c080abSJoseph Pusztay 502d0c080abSJoseph Pusztay if (ictx->showinitial) { 503d0c080abSJoseph Pusztay PetscReal pause; 5049566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawGetPause(ictx->viewer, &pause)); 5059566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawSetPause(ictx->viewer, 0.0)); 5069566063dSJacob Faibussowitsch PetscCall(VecView(ictx->initialsolution, ictx->viewer)); 5079566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawSetPause(ictx->viewer, pause)); 5089566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawSetHold(ictx->viewer, PETSC_TRUE)); 509d0c080abSJoseph Pusztay } 5109566063dSJacob Faibussowitsch PetscCall(VecView(u, ictx->viewer)); 511d0c080abSJoseph Pusztay if (ictx->showtimestepandtime) { 512d0c080abSJoseph Pusztay PetscReal xl, yl, xr, yr, h; 513d0c080abSJoseph Pusztay char time[32]; 514d0c080abSJoseph Pusztay 5159566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawGetDraw(ictx->viewer, 0, &draw)); 5169566063dSJacob Faibussowitsch PetscCall(PetscSNPrintf(time, 32, "Timestep %d Time %g", (int)step, (double)ptime)); 5179566063dSJacob Faibussowitsch PetscCall(PetscDrawGetCoordinates(draw, &xl, &yl, &xr, &yr)); 518d0c080abSJoseph Pusztay h = yl + .95 * (yr - yl); 5199566063dSJacob Faibussowitsch PetscCall(PetscDrawStringCentered(draw, .5 * (xl + xr), h, PETSC_DRAW_BLACK, time)); 5209566063dSJacob Faibussowitsch PetscCall(PetscDrawFlush(draw)); 521d0c080abSJoseph Pusztay } 522d0c080abSJoseph Pusztay 5231baa6e33SBarry Smith if (ictx->showinitial) PetscCall(PetscViewerDrawSetHold(ictx->viewer, PETSC_FALSE)); 5243ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 525d0c080abSJoseph Pusztay } 526d0c080abSJoseph Pusztay 527d0c080abSJoseph Pusztay /*@C 528bcf0153eSBarry Smith TSMonitorDrawSolutionPhase - Monitors progress of the `TS` solvers by plotting the solution as a phase diagram 529d0c080abSJoseph Pusztay 530c3339decSBarry Smith Collective 531d0c080abSJoseph Pusztay 532d0c080abSJoseph Pusztay Input Parameters: 533bcf0153eSBarry Smith + ts - the `TS` context 534d0c080abSJoseph Pusztay . step - current time-step 535d0c080abSJoseph Pusztay . ptime - current time 53614d0ab18SJacob Faibussowitsch . u - the solution at the current time 537195e9b02SBarry Smith - dummy - either a viewer or `NULL` 538d0c080abSJoseph Pusztay 539d0c080abSJoseph Pusztay Level: intermediate 540d0c080abSJoseph Pusztay 541bcf0153eSBarry Smith Notes: 542bcf0153eSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 543bcf0153eSBarry Smith to be used during the `TS` integration. 544bcf0153eSBarry Smith 5451cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()` 546d0c080abSJoseph Pusztay @*/ 547d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDrawSolutionPhase(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dummy) 548d71ae5a4SJacob Faibussowitsch { 549d0c080abSJoseph Pusztay TSMonitorDrawCtx ictx = (TSMonitorDrawCtx)dummy; 550d0c080abSJoseph Pusztay PetscDraw draw; 551d0c080abSJoseph Pusztay PetscDrawAxis axis; 552d0c080abSJoseph Pusztay PetscInt n; 553d0c080abSJoseph Pusztay PetscMPIInt size; 554d0c080abSJoseph Pusztay PetscReal U0, U1, xl, yl, xr, yr, h; 555d0c080abSJoseph Pusztay char time[32]; 556d0c080abSJoseph Pusztay const PetscScalar *U; 557d0c080abSJoseph Pusztay 558d0c080abSJoseph Pusztay PetscFunctionBegin; 5599566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)ts), &size)); 5603c633725SBarry Smith PetscCheck(size == 1, PetscObjectComm((PetscObject)ts), PETSC_ERR_SUP, "Only allowed for sequential runs"); 5619566063dSJacob Faibussowitsch PetscCall(VecGetSize(u, &n)); 5623c633725SBarry Smith PetscCheck(n == 2, PetscObjectComm((PetscObject)ts), PETSC_ERR_SUP, "Only for ODEs with two unknowns"); 563d0c080abSJoseph Pusztay 5649566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawGetDraw(ictx->viewer, 0, &draw)); 5659566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawGetDrawAxis(ictx->viewer, 0, &axis)); 5669566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisGetLimits(axis, &xl, &xr, &yl, &yr)); 567d0c080abSJoseph Pusztay if (!step) { 5689566063dSJacob Faibussowitsch PetscCall(PetscDrawClear(draw)); 5699566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisDraw(axis)); 570d0c080abSJoseph Pusztay } 571d0c080abSJoseph Pusztay 5729566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(u, &U)); 573d0c080abSJoseph Pusztay U0 = PetscRealPart(U[0]); 574d0c080abSJoseph Pusztay U1 = PetscRealPart(U[1]); 5759566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(u, &U)); 5763ba16761SJacob Faibussowitsch if ((U0 < xl) || (U1 < yl) || (U0 > xr) || (U1 > yr)) PetscFunctionReturn(PETSC_SUCCESS); 577d0c080abSJoseph Pusztay 578d0609cedSBarry Smith PetscDrawCollectiveBegin(draw); 5799566063dSJacob Faibussowitsch PetscCall(PetscDrawPoint(draw, U0, U1, PETSC_DRAW_BLACK)); 580d0c080abSJoseph Pusztay if (ictx->showtimestepandtime) { 5819566063dSJacob Faibussowitsch PetscCall(PetscDrawGetCoordinates(draw, &xl, &yl, &xr, &yr)); 5829566063dSJacob Faibussowitsch PetscCall(PetscSNPrintf(time, 32, "Timestep %d Time %g", (int)step, (double)ptime)); 583d0c080abSJoseph Pusztay h = yl + .95 * (yr - yl); 5849566063dSJacob Faibussowitsch PetscCall(PetscDrawStringCentered(draw, .5 * (xl + xr), h, PETSC_DRAW_BLACK, time)); 585d0c080abSJoseph Pusztay } 586d0609cedSBarry Smith PetscDrawCollectiveEnd(draw); 5879566063dSJacob Faibussowitsch PetscCall(PetscDrawFlush(draw)); 5889566063dSJacob Faibussowitsch PetscCall(PetscDrawPause(draw)); 5899566063dSJacob Faibussowitsch PetscCall(PetscDrawSave(draw)); 5903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 591d0c080abSJoseph Pusztay } 592d0c080abSJoseph Pusztay 593d0c080abSJoseph Pusztay /*@C 594bcf0153eSBarry Smith TSMonitorDrawCtxDestroy - Destroys the monitor context for `TSMonitorDrawSolution()` 595d0c080abSJoseph Pusztay 596c3339decSBarry Smith Collective 597d0c080abSJoseph Pusztay 5982fe279fdSBarry Smith Input Parameter: 599b43aa488SJacob Faibussowitsch . ictx - the monitor context 600d0c080abSJoseph Pusztay 601d0c080abSJoseph Pusztay Level: intermediate 602d0c080abSJoseph Pusztay 6031cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorDrawSolution()`, `TSMonitorDrawError()`, `TSMonitorDrawCtx` 604d0c080abSJoseph Pusztay @*/ 605d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDrawCtxDestroy(TSMonitorDrawCtx *ictx) 606d71ae5a4SJacob Faibussowitsch { 607d0c080abSJoseph Pusztay PetscFunctionBegin; 6089566063dSJacob Faibussowitsch PetscCall(PetscViewerDestroy(&(*ictx)->viewer)); 6099566063dSJacob Faibussowitsch PetscCall(VecDestroy(&(*ictx)->initialsolution)); 6109566063dSJacob Faibussowitsch PetscCall(PetscFree(*ictx)); 6113ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 612d0c080abSJoseph Pusztay } 613d0c080abSJoseph Pusztay 614d0c080abSJoseph Pusztay /*@C 615bcf0153eSBarry Smith TSMonitorDrawCtxCreate - Creates the monitor context for `TSMonitorDrawCtx` 616d0c080abSJoseph Pusztay 617c3339decSBarry Smith Collective 618d0c080abSJoseph Pusztay 61914d0ab18SJacob Faibussowitsch Input Parameters: 62014d0ab18SJacob Faibussowitsch + comm - the MPI communicator to use 62114d0ab18SJacob Faibussowitsch . host - the X display to open, or `NULL` for the local machine 62214d0ab18SJacob Faibussowitsch . label - the title to put in the title bar 62314d0ab18SJacob Faibussowitsch . x - the x screen coordinates of the upper left coordinate of the window 62414d0ab18SJacob Faibussowitsch . y - the y screen coordinates of the upper left coordinate of the window 62514d0ab18SJacob Faibussowitsch . m - the screen width in pixels 62614d0ab18SJacob Faibussowitsch . n - the screen height in pixels 62714d0ab18SJacob Faibussowitsch - howoften - if positive then determines the frequency of the plotting, if -1 then only at the final time 628d0c080abSJoseph Pusztay 629d5b43468SJose E. Roman Output Parameter: 630d0c080abSJoseph Pusztay . ctx - the monitor context 631d0c080abSJoseph Pusztay 632bcf0153eSBarry Smith Options Database Keys: 633bcf0153eSBarry Smith + -ts_monitor_draw_solution - draw the solution at each time-step 634bcf0153eSBarry Smith - -ts_monitor_draw_solution_initial - show initial solution as well as current solution 635d0c080abSJoseph Pusztay 636d0c080abSJoseph Pusztay Level: intermediate 637d0c080abSJoseph Pusztay 638bcf0153eSBarry Smith Note: 639bcf0153eSBarry Smith The context created by this function, `PetscMonitorDrawSolution()`, and `TSMonitorDrawCtxDestroy()` should be passed together to `TSMonitorSet()`. 640bcf0153eSBarry Smith 6411cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorDrawCtxDestroy()`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorDrawCtx`, `PetscMonitorDrawSolution()` 642d0c080abSJoseph Pusztay @*/ 643d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDrawCtxCreate(MPI_Comm comm, const char host[], const char label[], int x, int y, int m, int n, PetscInt howoften, TSMonitorDrawCtx *ctx) 644d71ae5a4SJacob Faibussowitsch { 645d0c080abSJoseph Pusztay PetscFunctionBegin; 6469566063dSJacob Faibussowitsch PetscCall(PetscNew(ctx)); 6479566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawOpen(comm, host, label, x, y, m, n, &(*ctx)->viewer)); 6489566063dSJacob Faibussowitsch PetscCall(PetscViewerSetFromOptions((*ctx)->viewer)); 649d0c080abSJoseph Pusztay 650d0c080abSJoseph Pusztay (*ctx)->howoften = howoften; 651d0c080abSJoseph Pusztay (*ctx)->showinitial = PETSC_FALSE; 6529566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-ts_monitor_draw_solution_initial", &(*ctx)->showinitial, NULL)); 653d0c080abSJoseph Pusztay 654d0c080abSJoseph Pusztay (*ctx)->showtimestepandtime = PETSC_FALSE; 6559566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-ts_monitor_draw_solution_show_time", &(*ctx)->showtimestepandtime, NULL)); 6563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 657d0c080abSJoseph Pusztay } 658d0c080abSJoseph Pusztay 659d0c080abSJoseph Pusztay /*@C 660bcf0153eSBarry Smith TSMonitorDrawSolutionFunction - Monitors progress of the `TS` solvers by calling 661bcf0153eSBarry Smith `VecView()` for the solution provided by `TSSetSolutionFunction()` at each timestep 662d0c080abSJoseph Pusztay 663c3339decSBarry Smith Collective 664d0c080abSJoseph Pusztay 665d0c080abSJoseph Pusztay Input Parameters: 666bcf0153eSBarry Smith + ts - the `TS` context 667d0c080abSJoseph Pusztay . step - current time-step 668d0c080abSJoseph Pusztay . ptime - current time 66914d0ab18SJacob Faibussowitsch . u - solution at current time 670195e9b02SBarry Smith - dummy - either a viewer or `NULL` 671d0c080abSJoseph Pusztay 672bcf0153eSBarry Smith Options Database Key: 673bcf0153eSBarry Smith . -ts_monitor_draw_solution_function - Monitor error graphically, requires user to have provided `TSSetSolutionFunction()` 6743a61192cSBarry Smith 675d0c080abSJoseph Pusztay Level: intermediate 676d0c080abSJoseph Pusztay 677bcf0153eSBarry Smith Note: 678bcf0153eSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 679bcf0153eSBarry Smith to be used during the `TS` integration. 680bcf0153eSBarry Smith 6811cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSSetSolutionFunction()` 682d0c080abSJoseph Pusztay @*/ 683d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDrawSolutionFunction(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dummy) 684d71ae5a4SJacob Faibussowitsch { 685d0c080abSJoseph Pusztay TSMonitorDrawCtx ctx = (TSMonitorDrawCtx)dummy; 686d0c080abSJoseph Pusztay PetscViewer viewer = ctx->viewer; 687d0c080abSJoseph Pusztay Vec work; 688d0c080abSJoseph Pusztay 689d0c080abSJoseph Pusztay PetscFunctionBegin; 6903ba16761SJacob Faibussowitsch if (!(((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason))) PetscFunctionReturn(PETSC_SUCCESS); 6919566063dSJacob Faibussowitsch PetscCall(VecDuplicate(u, &work)); 6929566063dSJacob Faibussowitsch PetscCall(TSComputeSolutionFunction(ts, ptime, work)); 6939566063dSJacob Faibussowitsch PetscCall(VecView(work, viewer)); 6949566063dSJacob Faibussowitsch PetscCall(VecDestroy(&work)); 6953ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 696d0c080abSJoseph Pusztay } 697d0c080abSJoseph Pusztay 698d0c080abSJoseph Pusztay /*@C 699bcf0153eSBarry Smith TSMonitorDrawError - Monitors progress of the `TS` solvers by calling 700bcf0153eSBarry Smith `VecView()` for the error at each timestep 701d0c080abSJoseph Pusztay 702c3339decSBarry Smith Collective 703d0c080abSJoseph Pusztay 704d0c080abSJoseph Pusztay Input Parameters: 705bcf0153eSBarry Smith + ts - the `TS` context 706d0c080abSJoseph Pusztay . step - current time-step 707d0c080abSJoseph Pusztay . ptime - current time 70814d0ab18SJacob Faibussowitsch . u - solution at current time 709195e9b02SBarry Smith - dummy - either a viewer or `NULL` 710d0c080abSJoseph Pusztay 711bcf0153eSBarry Smith Options Database Key: 712bcf0153eSBarry Smith . -ts_monitor_draw_error - Monitor error graphically, requires user to have provided `TSSetSolutionFunction()` 7133a61192cSBarry Smith 714d0c080abSJoseph Pusztay Level: intermediate 715d0c080abSJoseph Pusztay 716bcf0153eSBarry Smith Notes: 717bcf0153eSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 718bcf0153eSBarry Smith to be used during the `TS` integration. 719bcf0153eSBarry Smith 7201cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSSetSolutionFunction()` 721d0c080abSJoseph Pusztay @*/ 722d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDrawError(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dummy) 723d71ae5a4SJacob Faibussowitsch { 724d0c080abSJoseph Pusztay TSMonitorDrawCtx ctx = (TSMonitorDrawCtx)dummy; 725d0c080abSJoseph Pusztay PetscViewer viewer = ctx->viewer; 726d0c080abSJoseph Pusztay Vec work; 727d0c080abSJoseph Pusztay 728d0c080abSJoseph Pusztay PetscFunctionBegin; 7293ba16761SJacob Faibussowitsch if (!(((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason))) PetscFunctionReturn(PETSC_SUCCESS); 7309566063dSJacob Faibussowitsch PetscCall(VecDuplicate(u, &work)); 7319566063dSJacob Faibussowitsch PetscCall(TSComputeSolutionFunction(ts, ptime, work)); 7329566063dSJacob Faibussowitsch PetscCall(VecAXPY(work, -1.0, u)); 7339566063dSJacob Faibussowitsch PetscCall(VecView(work, viewer)); 7349566063dSJacob Faibussowitsch PetscCall(VecDestroy(&work)); 7353ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 736d0c080abSJoseph Pusztay } 737d0c080abSJoseph Pusztay 738d0c080abSJoseph Pusztay /*@C 739195e9b02SBarry Smith TSMonitorSolution - Monitors progress of the `TS` solvers by `VecView()` for the solution at each timestep. Normally the viewer is a binary file or a `PetscDraw` object 740d0c080abSJoseph Pusztay 741c3339decSBarry Smith Collective 742d0c080abSJoseph Pusztay 743d0c080abSJoseph Pusztay Input Parameters: 744bcf0153eSBarry Smith + ts - the `TS` context 745d0c080abSJoseph Pusztay . step - current time-step 746d0c080abSJoseph Pusztay . ptime - current time 747d0c080abSJoseph Pusztay . u - current state 748d0c080abSJoseph Pusztay - vf - viewer and its format 749d0c080abSJoseph Pusztay 750d0c080abSJoseph Pusztay Level: intermediate 751d0c080abSJoseph Pusztay 752bcf0153eSBarry Smith Notes: 753bcf0153eSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 754bcf0153eSBarry Smith to be used during the `TS` integration. 755bcf0153eSBarry Smith 7561cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()` 757d0c080abSJoseph Pusztay @*/ 758d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorSolution(TS ts, PetscInt step, PetscReal ptime, Vec u, PetscViewerAndFormat *vf) 759d71ae5a4SJacob Faibussowitsch { 760d0c080abSJoseph Pusztay PetscFunctionBegin; 761c17ba870SStefano Zampini if ((vf->view_interval > 0 && !(step % vf->view_interval)) || (vf->view_interval && ts->reason)) { 7629566063dSJacob Faibussowitsch PetscCall(PetscViewerPushFormat(vf->viewer, vf->format)); 7639566063dSJacob Faibussowitsch PetscCall(VecView(u, vf->viewer)); 7649566063dSJacob Faibussowitsch PetscCall(PetscViewerPopFormat(vf->viewer)); 765c17ba870SStefano Zampini } 7663ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 767d0c080abSJoseph Pusztay } 768d0c080abSJoseph Pusztay 769d0c080abSJoseph Pusztay /*@C 7707f27e910SStefano Zampini TSMonitorSolutionVTK - Monitors progress of the `TS` solvers by `VecView()` for the solution at selected timesteps. 771d0c080abSJoseph Pusztay 772c3339decSBarry Smith Collective 773d0c080abSJoseph Pusztay 774d0c080abSJoseph Pusztay Input Parameters: 775bcf0153eSBarry Smith + ts - the `TS` context 776d0c080abSJoseph Pusztay . step - current time-step 777d0c080abSJoseph Pusztay . ptime - current time 778d0c080abSJoseph Pusztay . u - current state 7797f27e910SStefano Zampini - ctx - monitor context obtained with `TSMonitorSolutionVTKCtxCreate()` 780d0c080abSJoseph Pusztay 7817f27e910SStefano Zampini Level: developer 782d0c080abSJoseph Pusztay 783d0c080abSJoseph Pusztay Notes: 784d0c080abSJoseph Pusztay The VTK format does not allow writing multiple time steps in the same file, therefore a different file will be written for each time step. 785d0c080abSJoseph Pusztay These are named according to the file name template. 786d0c080abSJoseph Pusztay 7873a61192cSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 788bcf0153eSBarry Smith to be used during the `TS` integration. 789d0c080abSJoseph Pusztay 7901cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()` 791d0c080abSJoseph Pusztay @*/ 7927f27e910SStefano Zampini PetscErrorCode TSMonitorSolutionVTK(TS ts, PetscInt step, PetscReal ptime, Vec u, TSMonitorVTKCtx ctx) 793d71ae5a4SJacob Faibussowitsch { 794d0c080abSJoseph Pusztay char filename[PETSC_MAX_PATH_LEN]; 795d0c080abSJoseph Pusztay PetscViewer viewer; 796d0c080abSJoseph Pusztay 797d0c080abSJoseph Pusztay PetscFunctionBegin; 7983ba16761SJacob Faibussowitsch if (step < 0) PetscFunctionReturn(PETSC_SUCCESS); /* -1 indicates interpolated solution */ 7997f27e910SStefano Zampini if (((ctx->interval > 0) && (!(step % ctx->interval))) || (ctx->interval && ts->reason)) { 8007f27e910SStefano Zampini PetscCall(PetscSNPrintf(filename, sizeof(filename), (const char *)ctx->filenametemplate, step)); 8019566063dSJacob Faibussowitsch PetscCall(PetscViewerVTKOpen(PetscObjectComm((PetscObject)ts), filename, FILE_MODE_WRITE, &viewer)); 8029566063dSJacob Faibussowitsch PetscCall(VecView(u, viewer)); 8039566063dSJacob Faibussowitsch PetscCall(PetscViewerDestroy(&viewer)); 8047f27e910SStefano Zampini } 8053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 806d0c080abSJoseph Pusztay } 807d0c080abSJoseph Pusztay 808d0c080abSJoseph Pusztay /*@C 8097f27e910SStefano Zampini TSMonitorSolutionVTKDestroy - Destroy the monitor context created with `TSMonitorSolutionVTKCtxCreate()` 810d0c080abSJoseph Pusztay 811bcf0153eSBarry Smith Not Collective 812d0c080abSJoseph Pusztay 8132fe279fdSBarry Smith Input Parameter: 8147f27e910SStefano Zampini . ctx - the monitor context 815d0c080abSJoseph Pusztay 8167f27e910SStefano Zampini Level: developer 817d0c080abSJoseph Pusztay 818d0c080abSJoseph Pusztay Note: 819bcf0153eSBarry Smith This function is normally passed to `TSMonitorSet()` along with `TSMonitorSolutionVTK()`. 820d0c080abSJoseph Pusztay 8211cc06b55SBarry Smith .seealso: [](ch_ts), `TSMonitorSet()`, `TSMonitorSolutionVTK()` 822d0c080abSJoseph Pusztay @*/ 8237f27e910SStefano Zampini PetscErrorCode TSMonitorSolutionVTKDestroy(TSMonitorVTKCtx *ctx) 824d71ae5a4SJacob Faibussowitsch { 825d0c080abSJoseph Pusztay PetscFunctionBegin; 8267f27e910SStefano Zampini PetscCall(PetscFree((*ctx)->filenametemplate)); 8277f27e910SStefano Zampini PetscCall(PetscFree(*ctx)); 8287f27e910SStefano Zampini PetscFunctionReturn(PETSC_SUCCESS); 8297f27e910SStefano Zampini } 8307f27e910SStefano Zampini 8317f27e910SStefano Zampini /*@C 8327f27e910SStefano Zampini TSMonitorSolutionVTKCtxCreate - Create the monitor context to be used in `TSMonitorSolutionVTK()` 8337f27e910SStefano Zampini 8347f27e910SStefano Zampini Not collective 8357f27e910SStefano Zampini 8367f27e910SStefano Zampini Input Parameter: 8377f27e910SStefano Zampini . filenametemplate - the template file name, e.g. foo-%03d.vts 8387f27e910SStefano Zampini 8397f27e910SStefano Zampini Output Parameter: 8407f27e910SStefano Zampini . ctx - the monitor context 8417f27e910SStefano Zampini 8427f27e910SStefano Zampini Level: developer 8437f27e910SStefano Zampini 8447f27e910SStefano Zampini Note: 8457f27e910SStefano Zampini This function is normally used inside `TSSetFromOptions()` to pass the context created to `TSMonitorSet()` along with `TSMonitorSolutionVTK()`. 8467f27e910SStefano Zampini 8477f27e910SStefano Zampini .seealso: [](ch_ts), `TSMonitorSet()`, `TSMonitorSolutionVTK()`, `TSMonitorSolutionVTKDestroy()` 8487f27e910SStefano Zampini @*/ 8497f27e910SStefano Zampini PetscErrorCode TSMonitorSolutionVTKCtxCreate(const char *filenametemplate, TSMonitorVTKCtx *ctx) 8507f27e910SStefano Zampini { 8517f27e910SStefano Zampini const char *ptr = NULL, *ptr2 = NULL; 8527f27e910SStefano Zampini TSMonitorVTKCtx ictx; 8537f27e910SStefano Zampini 8547f27e910SStefano Zampini PetscFunctionBegin; 8557f27e910SStefano Zampini PetscAssertPointer(filenametemplate, 1); 8567f27e910SStefano Zampini PetscAssertPointer(ctx, 2); 8577f27e910SStefano Zampini /* Do some cursory validation of the input. */ 8587f27e910SStefano Zampini PetscCall(PetscStrstr(filenametemplate, "%", (char **)&ptr)); 8597f27e910SStefano Zampini PetscCheck(ptr, PETSC_COMM_SELF, PETSC_ERR_USER, "-ts_monitor_solution_vtk requires a file template, e.g. filename-%%03" PetscInt_FMT ".vts"); 8607f27e910SStefano Zampini for (ptr++; ptr && *ptr; ptr++) { 8617f27e910SStefano Zampini PetscCall(PetscStrchr("DdiouxX", *ptr, (char **)&ptr2)); 8627f27e910SStefano Zampini PetscCheck(ptr2 || (*ptr >= '0' && *ptr <= '9'), PETSC_COMM_SELF, PETSC_ERR_USER, "Invalid file template argument to -ts_monitor_solution_vtk, should look like filename-%%03" PetscInt_FMT ".vts"); 8637f27e910SStefano Zampini if (ptr2) break; 8647f27e910SStefano Zampini } 8657f27e910SStefano Zampini PetscCall(PetscNew(&ictx)); 8667f27e910SStefano Zampini PetscCall(PetscStrallocpy(filenametemplate, &ictx->filenametemplate)); 8677f27e910SStefano Zampini ictx->interval = 1; 8687f27e910SStefano Zampini 8697f27e910SStefano Zampini *ctx = ictx; 8703ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 871d0c080abSJoseph Pusztay } 872d0c080abSJoseph Pusztay 873d0c080abSJoseph Pusztay /*@C 874bcf0153eSBarry Smith TSMonitorLGSolution - Monitors progress of the `TS` solvers by plotting each component of the solution vector 875d0c080abSJoseph Pusztay in a time based line graph 876d0c080abSJoseph Pusztay 877c3339decSBarry Smith Collective 878d0c080abSJoseph Pusztay 879d0c080abSJoseph Pusztay Input Parameters: 880bcf0153eSBarry Smith + ts - the `TS` context 881d0c080abSJoseph Pusztay . step - current time-step 882d0c080abSJoseph Pusztay . ptime - current time 883d0c080abSJoseph Pusztay . u - current solution 884bcf0153eSBarry Smith - dctx - the `TSMonitorLGCtx` object that contains all the options for the monitoring, this is created with `TSMonitorLGCtxCreate()` 885d0c080abSJoseph Pusztay 886bcf0153eSBarry Smith Options Database Key: 88767b8a455SSatish Balay . -ts_monitor_lg_solution_variables - enable monitor of lg solution variables 888d0c080abSJoseph Pusztay 889d0c080abSJoseph Pusztay Level: intermediate 890d0c080abSJoseph Pusztay 891d0c080abSJoseph Pusztay Notes: 892d0c080abSJoseph Pusztay Each process in a parallel run displays its component solutions in a separate window 893d0c080abSJoseph Pusztay 8943a61192cSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 895bcf0153eSBarry Smith to be used during the `TS` integration. 8963a61192cSBarry Smith 8971cc06b55SBarry Smith .seealso: [](ch_ts), `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGCtxCreate()`, `TSMonitorLGCtxSetVariableNames()`, `TSMonitorLGCtxGetVariableNames()`, 898db781477SPatrick Sanan `TSMonitorLGSetVariableNames()`, `TSMonitorLGGetVariableNames()`, `TSMonitorLGSetDisplayVariables()`, `TSMonitorLGCtxSetDisplayVariables()`, 899db781477SPatrick Sanan `TSMonitorLGCtxSetTransform()`, `TSMonitorLGSetTransform()`, `TSMonitorLGError()`, `TSMonitorLGSNESIterations()`, `TSMonitorLGKSPIterations()`, 900db781477SPatrick Sanan `TSMonitorEnvelopeCtxCreate()`, `TSMonitorEnvelopeGetBounds()`, `TSMonitorEnvelopeCtxDestroy()`, `TSMonitorEnvelop()` 901d0c080abSJoseph Pusztay @*/ 902d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGSolution(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dctx) 903d71ae5a4SJacob Faibussowitsch { 904d0c080abSJoseph Pusztay TSMonitorLGCtx ctx = (TSMonitorLGCtx)dctx; 905d0c080abSJoseph Pusztay const PetscScalar *yy; 906d0c080abSJoseph Pusztay Vec v; 907d0c080abSJoseph Pusztay 908d0c080abSJoseph Pusztay PetscFunctionBegin; 9093ba16761SJacob Faibussowitsch if (step < 0) PetscFunctionReturn(PETSC_SUCCESS); /* -1 indicates interpolated solution */ 910d0c080abSJoseph Pusztay if (!step) { 911d0c080abSJoseph Pusztay PetscDrawAxis axis; 912d0c080abSJoseph Pusztay PetscInt dim; 9139566063dSJacob Faibussowitsch PetscCall(PetscDrawLGGetAxis(ctx->lg, &axis)); 9149566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisSetLabels(axis, "Solution as function of time", "Time", "Solution")); 915d0c080abSJoseph Pusztay if (!ctx->names) { 916d0c080abSJoseph Pusztay PetscBool flg; 917d0c080abSJoseph Pusztay /* user provides names of variables to plot but no names has been set so assume names are integer values */ 9189566063dSJacob Faibussowitsch PetscCall(PetscOptionsHasName(((PetscObject)ts)->options, ((PetscObject)ts)->prefix, "-ts_monitor_lg_solution_variables", &flg)); 919d0c080abSJoseph Pusztay if (flg) { 920d0c080abSJoseph Pusztay PetscInt i, n; 921d0c080abSJoseph Pusztay char **names; 9229566063dSJacob Faibussowitsch PetscCall(VecGetSize(u, &n)); 9239566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n + 1, &names)); 924d0c080abSJoseph Pusztay for (i = 0; i < n; i++) { 9259566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(5, &names[i])); 92663a3b9bcSJacob Faibussowitsch PetscCall(PetscSNPrintf(names[i], 5, "%" PetscInt_FMT, i)); 927d0c080abSJoseph Pusztay } 928d0c080abSJoseph Pusztay names[n] = NULL; 929d0c080abSJoseph Pusztay ctx->names = names; 930d0c080abSJoseph Pusztay } 931d0c080abSJoseph Pusztay } 932d0c080abSJoseph Pusztay if (ctx->names && !ctx->displaynames) { 933d0c080abSJoseph Pusztay char **displaynames; 934d0c080abSJoseph Pusztay PetscBool flg; 9359566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(u, &dim)); 9369566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(dim + 1, &displaynames)); 9379566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetStringArray(((PetscObject)ts)->options, ((PetscObject)ts)->prefix, "-ts_monitor_lg_solution_variables", displaynames, &dim, &flg)); 9381baa6e33SBarry Smith if (flg) PetscCall(TSMonitorLGCtxSetDisplayVariables(ctx, (const char *const *)displaynames)); 9399566063dSJacob Faibussowitsch PetscCall(PetscStrArrayDestroy(&displaynames)); 940d0c080abSJoseph Pusztay } 941d0c080abSJoseph Pusztay if (ctx->displaynames) { 9429566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSetDimension(ctx->lg, ctx->ndisplayvariables)); 9439566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSetLegend(ctx->lg, (const char *const *)ctx->displaynames)); 944d0c080abSJoseph Pusztay } else if (ctx->names) { 9459566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(u, &dim)); 9469566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSetDimension(ctx->lg, dim)); 9479566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSetLegend(ctx->lg, (const char *const *)ctx->names)); 948d0c080abSJoseph Pusztay } else { 9499566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(u, &dim)); 9509566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSetDimension(ctx->lg, dim)); 951d0c080abSJoseph Pusztay } 9529566063dSJacob Faibussowitsch PetscCall(PetscDrawLGReset(ctx->lg)); 953d0c080abSJoseph Pusztay } 954d0c080abSJoseph Pusztay 955d0c080abSJoseph Pusztay if (!ctx->transform) v = u; 9569566063dSJacob Faibussowitsch else PetscCall((*ctx->transform)(ctx->transformctx, u, &v)); 9579566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(v, &yy)); 958d0c080abSJoseph Pusztay if (ctx->displaynames) { 959d0c080abSJoseph Pusztay PetscInt i; 9609371c9d4SSatish Balay for (i = 0; i < ctx->ndisplayvariables; i++) ctx->displayvalues[i] = PetscRealPart(yy[ctx->displayvariables[i]]); 9619566063dSJacob Faibussowitsch PetscCall(PetscDrawLGAddCommonPoint(ctx->lg, ptime, ctx->displayvalues)); 962d0c080abSJoseph Pusztay } else { 963d0c080abSJoseph Pusztay #if defined(PETSC_USE_COMPLEX) 964d0c080abSJoseph Pusztay PetscInt i, n; 965d0c080abSJoseph Pusztay PetscReal *yreal; 9669566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(v, &n)); 9679566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &yreal)); 968d0c080abSJoseph Pusztay for (i = 0; i < n; i++) yreal[i] = PetscRealPart(yy[i]); 9699566063dSJacob Faibussowitsch PetscCall(PetscDrawLGAddCommonPoint(ctx->lg, ptime, yreal)); 9709566063dSJacob Faibussowitsch PetscCall(PetscFree(yreal)); 971d0c080abSJoseph Pusztay #else 9729566063dSJacob Faibussowitsch PetscCall(PetscDrawLGAddCommonPoint(ctx->lg, ptime, yy)); 973d0c080abSJoseph Pusztay #endif 974d0c080abSJoseph Pusztay } 9759566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(v, &yy)); 9769566063dSJacob Faibussowitsch if (ctx->transform) PetscCall(VecDestroy(&v)); 977d0c080abSJoseph Pusztay 978d0c080abSJoseph Pusztay if (((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason)) { 9799566063dSJacob Faibussowitsch PetscCall(PetscDrawLGDraw(ctx->lg)); 9809566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSave(ctx->lg)); 981d0c080abSJoseph Pusztay } 9823ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 983d0c080abSJoseph Pusztay } 984d0c080abSJoseph Pusztay 985d0c080abSJoseph Pusztay /*@C 986d0c080abSJoseph Pusztay TSMonitorLGSetVariableNames - Sets the name of each component in the solution vector so that it may be displayed in the plot 987d0c080abSJoseph Pusztay 988c3339decSBarry Smith Collective 989d0c080abSJoseph Pusztay 990d0c080abSJoseph Pusztay Input Parameters: 991bcf0153eSBarry Smith + ts - the `TS` context 992195e9b02SBarry Smith - names - the names of the components, final string must be `NULL` 993d0c080abSJoseph Pusztay 994d0c080abSJoseph Pusztay Level: intermediate 995d0c080abSJoseph Pusztay 996d0c080abSJoseph Pusztay Notes: 997bcf0153eSBarry Smith If the `TS` object does not have a `TSMonitorLGCtx` associated with it then this function is ignored 998d0c080abSJoseph Pusztay 9991cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetDisplayVariables()`, `TSMonitorLGCtxSetVariableNames()` 1000d0c080abSJoseph Pusztay @*/ 1001d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGSetVariableNames(TS ts, const char *const *names) 1002d71ae5a4SJacob Faibussowitsch { 1003d0c080abSJoseph Pusztay PetscInt i; 1004d0c080abSJoseph Pusztay 1005d0c080abSJoseph Pusztay PetscFunctionBegin; 1006d0c080abSJoseph Pusztay for (i = 0; i < ts->numbermonitors; i++) { 1007d0c080abSJoseph Pusztay if (ts->monitor[i] == TSMonitorLGSolution) { 10089566063dSJacob Faibussowitsch PetscCall(TSMonitorLGCtxSetVariableNames((TSMonitorLGCtx)ts->monitorcontext[i], names)); 1009d0c080abSJoseph Pusztay break; 1010d0c080abSJoseph Pusztay } 1011d0c080abSJoseph Pusztay } 10123ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1013d0c080abSJoseph Pusztay } 1014d0c080abSJoseph Pusztay 1015d0c080abSJoseph Pusztay /*@C 1016d0c080abSJoseph Pusztay TSMonitorLGCtxSetVariableNames - Sets the name of each component in the solution vector so that it may be displayed in the plot 1017d0c080abSJoseph Pusztay 1018c3339decSBarry Smith Collective 1019d0c080abSJoseph Pusztay 1020d0c080abSJoseph Pusztay Input Parameters: 1021b43aa488SJacob Faibussowitsch + ctx - the `TS` context 1022195e9b02SBarry Smith - names - the names of the components, final string must be `NULL` 1023d0c080abSJoseph Pusztay 1024d0c080abSJoseph Pusztay Level: intermediate 1025d0c080abSJoseph Pusztay 10261cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetDisplayVariables()`, `TSMonitorLGSetVariableNames()` 1027d0c080abSJoseph Pusztay @*/ 1028d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGCtxSetVariableNames(TSMonitorLGCtx ctx, const char *const *names) 1029d71ae5a4SJacob Faibussowitsch { 1030d0c080abSJoseph Pusztay PetscFunctionBegin; 10319566063dSJacob Faibussowitsch PetscCall(PetscStrArrayDestroy(&ctx->names)); 10329566063dSJacob Faibussowitsch PetscCall(PetscStrArrayallocpy(names, &ctx->names)); 10333ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1034d0c080abSJoseph Pusztay } 1035d0c080abSJoseph Pusztay 1036d0c080abSJoseph Pusztay /*@C 1037d0c080abSJoseph Pusztay TSMonitorLGGetVariableNames - Gets the name of each component in the solution vector so that it may be displayed in the plot 1038d0c080abSJoseph Pusztay 1039c3339decSBarry Smith Collective 1040d0c080abSJoseph Pusztay 1041d0c080abSJoseph Pusztay Input Parameter: 1042bcf0153eSBarry Smith . ts - the `TS` context 1043d0c080abSJoseph Pusztay 1044d0c080abSJoseph Pusztay Output Parameter: 1045195e9b02SBarry Smith . names - the names of the components, final string must be `NULL` 1046d0c080abSJoseph Pusztay 1047d0c080abSJoseph Pusztay Level: intermediate 1048d0c080abSJoseph Pusztay 1049bcf0153eSBarry Smith Note: 1050bcf0153eSBarry Smith If the `TS` object does not have a `TSMonitorLGCtx` associated with it then this function is ignored 1051d0c080abSJoseph Pusztay 10521cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetDisplayVariables()` 1053d0c080abSJoseph Pusztay @*/ 1054d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGGetVariableNames(TS ts, const char *const **names) 1055d71ae5a4SJacob Faibussowitsch { 1056d0c080abSJoseph Pusztay PetscInt i; 1057d0c080abSJoseph Pusztay 1058d0c080abSJoseph Pusztay PetscFunctionBegin; 1059d0c080abSJoseph Pusztay *names = NULL; 1060d0c080abSJoseph Pusztay for (i = 0; i < ts->numbermonitors; i++) { 1061d0c080abSJoseph Pusztay if (ts->monitor[i] == TSMonitorLGSolution) { 1062d0c080abSJoseph Pusztay TSMonitorLGCtx ctx = (TSMonitorLGCtx)ts->monitorcontext[i]; 1063d0c080abSJoseph Pusztay *names = (const char *const *)ctx->names; 1064d0c080abSJoseph Pusztay break; 1065d0c080abSJoseph Pusztay } 1066d0c080abSJoseph Pusztay } 10673ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1068d0c080abSJoseph Pusztay } 1069d0c080abSJoseph Pusztay 1070d0c080abSJoseph Pusztay /*@C 1071d0c080abSJoseph Pusztay TSMonitorLGCtxSetDisplayVariables - Sets the variables that are to be display in the monitor 1072d0c080abSJoseph Pusztay 1073c3339decSBarry Smith Collective 1074d0c080abSJoseph Pusztay 1075d0c080abSJoseph Pusztay Input Parameters: 1076bcf0153eSBarry Smith + ctx - the `TSMonitorLG` context 1077195e9b02SBarry Smith - displaynames - the names of the components, final string must be `NULL` 1078d0c080abSJoseph Pusztay 1079d0c080abSJoseph Pusztay Level: intermediate 1080d0c080abSJoseph Pusztay 10811cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetVariableNames()` 1082d0c080abSJoseph Pusztay @*/ 1083d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGCtxSetDisplayVariables(TSMonitorLGCtx ctx, const char *const *displaynames) 1084d71ae5a4SJacob Faibussowitsch { 1085d0c080abSJoseph Pusztay PetscInt j = 0, k; 1086d0c080abSJoseph Pusztay 1087d0c080abSJoseph Pusztay PetscFunctionBegin; 10883ba16761SJacob Faibussowitsch if (!ctx->names) PetscFunctionReturn(PETSC_SUCCESS); 10899566063dSJacob Faibussowitsch PetscCall(PetscStrArrayDestroy(&ctx->displaynames)); 10909566063dSJacob Faibussowitsch PetscCall(PetscStrArrayallocpy(displaynames, &ctx->displaynames)); 1091d0c080abSJoseph Pusztay while (displaynames[j]) j++; 1092d0c080abSJoseph Pusztay ctx->ndisplayvariables = j; 10939566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(ctx->ndisplayvariables, &ctx->displayvariables)); 10949566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(ctx->ndisplayvariables, &ctx->displayvalues)); 1095d0c080abSJoseph Pusztay j = 0; 1096d0c080abSJoseph Pusztay while (displaynames[j]) { 1097d0c080abSJoseph Pusztay k = 0; 1098d0c080abSJoseph Pusztay while (ctx->names[k]) { 1099d0c080abSJoseph Pusztay PetscBool flg; 11009566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(displaynames[j], ctx->names[k], &flg)); 1101d0c080abSJoseph Pusztay if (flg) { 1102d0c080abSJoseph Pusztay ctx->displayvariables[j] = k; 1103d0c080abSJoseph Pusztay break; 1104d0c080abSJoseph Pusztay } 1105d0c080abSJoseph Pusztay k++; 1106d0c080abSJoseph Pusztay } 1107d0c080abSJoseph Pusztay j++; 1108d0c080abSJoseph Pusztay } 11093ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1110d0c080abSJoseph Pusztay } 1111d0c080abSJoseph Pusztay 1112d0c080abSJoseph Pusztay /*@C 1113d0c080abSJoseph Pusztay TSMonitorLGSetDisplayVariables - Sets the variables that are to be display in the monitor 1114d0c080abSJoseph Pusztay 1115c3339decSBarry Smith Collective 1116d0c080abSJoseph Pusztay 1117d0c080abSJoseph Pusztay Input Parameters: 1118bcf0153eSBarry Smith + ts - the `TS` context 1119195e9b02SBarry Smith - displaynames - the names of the components, final string must be `NULL` 1120d0c080abSJoseph Pusztay 1121d0c080abSJoseph Pusztay Level: intermediate 1122d0c080abSJoseph Pusztay 1123bcf0153eSBarry Smith Note: 1124bcf0153eSBarry Smith If the `TS` object does not have a `TSMonitorLGCtx` associated with it then this function is ignored 1125bcf0153eSBarry Smith 11261cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetVariableNames()` 1127d0c080abSJoseph Pusztay @*/ 1128d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGSetDisplayVariables(TS ts, const char *const *displaynames) 1129d71ae5a4SJacob Faibussowitsch { 1130d0c080abSJoseph Pusztay PetscInt i; 1131d0c080abSJoseph Pusztay 1132d0c080abSJoseph Pusztay PetscFunctionBegin; 1133d0c080abSJoseph Pusztay for (i = 0; i < ts->numbermonitors; i++) { 1134d0c080abSJoseph Pusztay if (ts->monitor[i] == TSMonitorLGSolution) { 11359566063dSJacob Faibussowitsch PetscCall(TSMonitorLGCtxSetDisplayVariables((TSMonitorLGCtx)ts->monitorcontext[i], displaynames)); 1136d0c080abSJoseph Pusztay break; 1137d0c080abSJoseph Pusztay } 1138d0c080abSJoseph Pusztay } 11393ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1140d0c080abSJoseph Pusztay } 1141d0c080abSJoseph Pusztay 1142d0c080abSJoseph Pusztay /*@C 1143d0c080abSJoseph Pusztay TSMonitorLGSetTransform - Solution vector will be transformed by provided function before being displayed 1144d0c080abSJoseph Pusztay 1145c3339decSBarry Smith Collective 1146d0c080abSJoseph Pusztay 1147d0c080abSJoseph Pusztay Input Parameters: 1148bcf0153eSBarry Smith + ts - the `TS` context 1149d0c080abSJoseph Pusztay . transform - the transform function 1150*49abdd8aSBarry Smith . destroy - function to destroy the optional context, see `PetscCtxDestroyFn` for its calling sequence 1151b43aa488SJacob Faibussowitsch - tctx - optional context used by transform function 1152d0c080abSJoseph Pusztay 1153d0c080abSJoseph Pusztay Level: intermediate 1154d0c080abSJoseph Pusztay 1155bcf0153eSBarry Smith Note: 1156bcf0153eSBarry Smith If the `TS` object does not have a `TSMonitorLGCtx` associated with it then this function is ignored 1157bcf0153eSBarry Smith 1158*49abdd8aSBarry Smith .seealso: [](ch_ts), `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetVariableNames()`, `TSMonitorLGCtxSetTransform()`, `PetscCtxDestroyFn` 1159d0c080abSJoseph Pusztay @*/ 1160*49abdd8aSBarry Smith PetscErrorCode TSMonitorLGSetTransform(TS ts, PetscErrorCode (*transform)(void *, Vec, Vec *), PetscCtxDestroyFn *destroy, void *tctx) 1161d71ae5a4SJacob Faibussowitsch { 1162d0c080abSJoseph Pusztay PetscInt i; 1163d0c080abSJoseph Pusztay 1164d0c080abSJoseph Pusztay PetscFunctionBegin; 1165d0c080abSJoseph Pusztay for (i = 0; i < ts->numbermonitors; i++) { 116648a46eb9SPierre Jolivet if (ts->monitor[i] == TSMonitorLGSolution) PetscCall(TSMonitorLGCtxSetTransform((TSMonitorLGCtx)ts->monitorcontext[i], transform, destroy, tctx)); 1167d0c080abSJoseph Pusztay } 11683ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1169d0c080abSJoseph Pusztay } 1170d0c080abSJoseph Pusztay 1171d0c080abSJoseph Pusztay /*@C 1172d0c080abSJoseph Pusztay TSMonitorLGCtxSetTransform - Solution vector will be transformed by provided function before being displayed 1173d0c080abSJoseph Pusztay 1174c3339decSBarry Smith Collective 1175d0c080abSJoseph Pusztay 1176d0c080abSJoseph Pusztay Input Parameters: 1177b43aa488SJacob Faibussowitsch + tctx - the `TS` context 1178d0c080abSJoseph Pusztay . transform - the transform function 1179*49abdd8aSBarry Smith . destroy - function to destroy the optional context, see `PetscCtxDestroyFn` for its calling sequence 1180d0c080abSJoseph Pusztay - ctx - optional context used by transform function 1181d0c080abSJoseph Pusztay 1182d0c080abSJoseph Pusztay Level: intermediate 1183d0c080abSJoseph Pusztay 1184*49abdd8aSBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetVariableNames()`, `TSMonitorLGSetTransform()`, `PetscCtxDestroyFn` 1185d0c080abSJoseph Pusztay @*/ 1186*49abdd8aSBarry Smith PetscErrorCode TSMonitorLGCtxSetTransform(TSMonitorLGCtx ctx, PetscErrorCode (*transform)(void *, Vec, Vec *), PetscCtxDestroyFn *destroy, void *tctx) 1187d71ae5a4SJacob Faibussowitsch { 1188d0c080abSJoseph Pusztay PetscFunctionBegin; 1189d0c080abSJoseph Pusztay ctx->transform = transform; 1190d0c080abSJoseph Pusztay ctx->transformdestroy = destroy; 1191d0c080abSJoseph Pusztay ctx->transformctx = tctx; 11923ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1193d0c080abSJoseph Pusztay } 1194d0c080abSJoseph Pusztay 1195d0c080abSJoseph Pusztay /*@C 1196bcf0153eSBarry Smith TSMonitorLGError - Monitors progress of the `TS` solvers by plotting each component of the error 1197d0c080abSJoseph Pusztay in a time based line graph 1198d0c080abSJoseph Pusztay 1199c3339decSBarry Smith Collective 1200d0c080abSJoseph Pusztay 1201d0c080abSJoseph Pusztay Input Parameters: 1202bcf0153eSBarry Smith + ts - the `TS` context 1203d0c080abSJoseph Pusztay . step - current time-step 1204d0c080abSJoseph Pusztay . ptime - current time 1205d0c080abSJoseph Pusztay . u - current solution 1206b43aa488SJacob Faibussowitsch - dummy - `TSMonitorLGCtx` object created with `TSMonitorLGCtxCreate()` 1207d0c080abSJoseph Pusztay 1208bcf0153eSBarry Smith Options Database Key: 12093a61192cSBarry Smith . -ts_monitor_lg_error - create a graphical monitor of error history 12103a61192cSBarry Smith 1211d0c080abSJoseph Pusztay Level: intermediate 1212d0c080abSJoseph Pusztay 1213d0c080abSJoseph Pusztay Notes: 1214d0c080abSJoseph Pusztay Each process in a parallel run displays its component errors in a separate window 1215d0c080abSJoseph Pusztay 1216bcf0153eSBarry Smith The user must provide the solution using `TSSetSolutionFunction()` to use this monitor. 1217d0c080abSJoseph Pusztay 12183a61192cSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 12193a61192cSBarry Smith to be used during the TS integration. 1220d0c080abSJoseph Pusztay 12211cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSSetSolutionFunction()` 1222d0c080abSJoseph Pusztay @*/ 1223d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGError(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dummy) 1224d71ae5a4SJacob Faibussowitsch { 1225d0c080abSJoseph Pusztay TSMonitorLGCtx ctx = (TSMonitorLGCtx)dummy; 1226d0c080abSJoseph Pusztay const PetscScalar *yy; 1227d0c080abSJoseph Pusztay Vec y; 1228d0c080abSJoseph Pusztay 1229d0c080abSJoseph Pusztay PetscFunctionBegin; 1230d0c080abSJoseph Pusztay if (!step) { 1231d0c080abSJoseph Pusztay PetscDrawAxis axis; 1232d0c080abSJoseph Pusztay PetscInt dim; 12339566063dSJacob Faibussowitsch PetscCall(PetscDrawLGGetAxis(ctx->lg, &axis)); 12349566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisSetLabels(axis, "Error in solution as function of time", "Time", "Error")); 12359566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(u, &dim)); 12369566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSetDimension(ctx->lg, dim)); 12379566063dSJacob Faibussowitsch PetscCall(PetscDrawLGReset(ctx->lg)); 1238d0c080abSJoseph Pusztay } 12399566063dSJacob Faibussowitsch PetscCall(VecDuplicate(u, &y)); 12409566063dSJacob Faibussowitsch PetscCall(TSComputeSolutionFunction(ts, ptime, y)); 12419566063dSJacob Faibussowitsch PetscCall(VecAXPY(y, -1.0, u)); 12429566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(y, &yy)); 1243d0c080abSJoseph Pusztay #if defined(PETSC_USE_COMPLEX) 1244d0c080abSJoseph Pusztay { 1245d0c080abSJoseph Pusztay PetscReal *yreal; 1246d0c080abSJoseph Pusztay PetscInt i, n; 12479566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(y, &n)); 12489566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &yreal)); 1249d0c080abSJoseph Pusztay for (i = 0; i < n; i++) yreal[i] = PetscRealPart(yy[i]); 12509566063dSJacob Faibussowitsch PetscCall(PetscDrawLGAddCommonPoint(ctx->lg, ptime, yreal)); 12519566063dSJacob Faibussowitsch PetscCall(PetscFree(yreal)); 1252d0c080abSJoseph Pusztay } 1253d0c080abSJoseph Pusztay #else 12549566063dSJacob Faibussowitsch PetscCall(PetscDrawLGAddCommonPoint(ctx->lg, ptime, yy)); 1255d0c080abSJoseph Pusztay #endif 12569566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(y, &yy)); 12579566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y)); 1258d0c080abSJoseph Pusztay if (((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason)) { 12599566063dSJacob Faibussowitsch PetscCall(PetscDrawLGDraw(ctx->lg)); 12609566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSave(ctx->lg)); 1261d0c080abSJoseph Pusztay } 12623ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1263d0c080abSJoseph Pusztay } 1264d0c080abSJoseph Pusztay 1265d0c080abSJoseph Pusztay /*@C 1266bcf0153eSBarry Smith TSMonitorSPSwarmSolution - Graphically displays phase plots of `DMSWARM` particles on a scatter plot 1267d0c080abSJoseph Pusztay 1268d0c080abSJoseph Pusztay Input Parameters: 1269bcf0153eSBarry Smith + ts - the `TS` context 1270d0c080abSJoseph Pusztay . step - current time-step 1271d0c080abSJoseph Pusztay . ptime - current time 1272d0c080abSJoseph Pusztay . u - current solution 1273bcf0153eSBarry Smith - dctx - the `TSMonitorSPCtx` object that contains all the options for the monitoring, this is created with `TSMonitorSPCtxCreate()` 1274d0c080abSJoseph Pusztay 1275bcf0153eSBarry Smith Options Database Keys: 1276d7462660SMatthew Knepley + -ts_monitor_sp_swarm <n> - Monitor the solution every n steps, or -1 for plotting only the final solution 1277d7462660SMatthew Knepley . -ts_monitor_sp_swarm_retain <n> - Retain n old points so we can see the history, or -1 for all points 127820f4b53cSBarry Smith . -ts_monitor_sp_swarm_multi_species <bool> - Color each species differently 1279d7462660SMatthew Knepley - -ts_monitor_sp_swarm_phase <bool> - Plot in phase space, as opposed to coordinate space 1280d0c080abSJoseph Pusztay 1281d0c080abSJoseph Pusztay Level: intermediate 1282d0c080abSJoseph Pusztay 12833a61192cSBarry Smith Notes: 12843a61192cSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 1285bcf0153eSBarry Smith to be used during the `TS` integration. 12863a61192cSBarry Smith 12871cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitoSet()`, `DMSWARM`, `TSMonitorSPCtxCreate()` 1288d0c080abSJoseph Pusztay @*/ 1289d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorSPSwarmSolution(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dctx) 1290d71ae5a4SJacob Faibussowitsch { 1291d0c080abSJoseph Pusztay TSMonitorSPCtx ctx = (TSMonitorSPCtx)dctx; 1292f98b2f00SMatthew G. Knepley PetscDraw draw; 1293d7462660SMatthew Knepley DM dm, cdm; 1294d0c080abSJoseph Pusztay const PetscScalar *yy; 129560e16b1bSMatthew G. Knepley PetscInt Np, p, dim = 2, *species; 129660e16b1bSMatthew G. Knepley PetscReal species_color; 1297d0c080abSJoseph Pusztay 1298d0c080abSJoseph Pusztay PetscFunctionBegin; 12993ba16761SJacob Faibussowitsch if (step < 0) PetscFunctionReturn(PETSC_SUCCESS); /* -1 indicates interpolated solution */ 130060e16b1bSMatthew G. Knepley PetscCall(TSGetDM(ts, &dm)); 1301d0c080abSJoseph Pusztay if (!step) { 1302d0c080abSJoseph Pusztay PetscDrawAxis axis; 1303ab43fcacSJoe Pusztay PetscReal dmboxlower[2], dmboxupper[2]; 1304f98b2f00SMatthew G. Knepley 13059566063dSJacob Faibussowitsch PetscCall(TSGetDM(ts, &dm)); 13069566063dSJacob Faibussowitsch PetscCall(DMGetDimension(dm, &dim)); 13073c633725SBarry Smith PetscCheck(dim == 2, PETSC_COMM_SELF, PETSC_ERR_SUP, "Monitor only supports two dimensional fields"); 13089566063dSJacob Faibussowitsch PetscCall(DMSwarmGetCellDM(dm, &cdm)); 13099566063dSJacob Faibussowitsch PetscCall(DMGetBoundingBox(cdm, dmboxlower, dmboxupper)); 13109566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(u, &Np)); 1311d7462660SMatthew Knepley Np /= dim * 2; 13129566063dSJacob Faibussowitsch PetscCall(PetscDrawSPGetAxis(ctx->sp, &axis)); 13138c87cf4dSdanfinn if (ctx->phase) { 13149566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisSetLabels(axis, "Particles", "X", "V")); 131560e16b1bSMatthew G. Knepley PetscCall(PetscDrawAxisSetLimits(axis, dmboxlower[0], dmboxupper[0], -10, 10)); 13168c87cf4dSdanfinn } else { 13179566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisSetLabels(axis, "Particles", "X", "Y")); 13189566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisSetLimits(axis, dmboxlower[0], dmboxupper[0], dmboxlower[1], dmboxupper[1])); 13198c87cf4dSdanfinn } 13209566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisSetHoldLimits(axis, PETSC_TRUE)); 13219566063dSJacob Faibussowitsch PetscCall(PetscDrawSPReset(ctx->sp)); 1322d0c080abSJoseph Pusztay } 132360e16b1bSMatthew G. Knepley if (ctx->multispecies) PetscCall(DMSwarmGetField(dm, "species", NULL, NULL, (void **)&species)); 13249566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(u, &Np)); 1325d7462660SMatthew Knepley Np /= dim * 2; 1326d0c080abSJoseph Pusztay if (((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason)) { 13279566063dSJacob Faibussowitsch PetscCall(PetscDrawSPGetDraw(ctx->sp, &draw)); 132848a46eb9SPierre Jolivet if ((ctx->retain == 0) || (ctx->retain > 0 && !(step % ctx->retain))) PetscCall(PetscDrawClear(draw)); 13299566063dSJacob Faibussowitsch PetscCall(PetscDrawFlush(draw)); 13309566063dSJacob Faibussowitsch PetscCall(PetscDrawSPReset(ctx->sp)); 1331f98b2f00SMatthew G. Knepley PetscCall(VecGetArrayRead(u, &yy)); 1332f98b2f00SMatthew G. Knepley for (p = 0; p < Np; ++p) { 1333f98b2f00SMatthew G. Knepley PetscReal x, y; 1334f98b2f00SMatthew G. Knepley 1335f98b2f00SMatthew G. Knepley if (ctx->phase) { 1336f98b2f00SMatthew G. Knepley x = PetscRealPart(yy[p * dim * 2]); 1337f98b2f00SMatthew G. Knepley y = PetscRealPart(yy[p * dim * 2 + dim]); 1338f98b2f00SMatthew G. Knepley } else { 1339f98b2f00SMatthew G. Knepley x = PetscRealPart(yy[p * dim * 2]); 1340f98b2f00SMatthew G. Knepley y = PetscRealPart(yy[p * dim * 2 + 1]); 1341f98b2f00SMatthew G. Knepley } 134260e16b1bSMatthew G. Knepley if (ctx->multispecies) { 134360e16b1bSMatthew G. Knepley species_color = species[p] + 2; 134460e16b1bSMatthew G. Knepley PetscCall(PetscDrawSPAddPointColorized(ctx->sp, &x, &y, &species_color)); 134560e16b1bSMatthew G. Knepley } else { 134660e16b1bSMatthew G. Knepley PetscCall(PetscDrawSPAddPoint(ctx->sp, &x, &y)); 134760e16b1bSMatthew G. Knepley } 1348f98b2f00SMatthew G. Knepley PetscCall(PetscDrawSPAddPoint(ctx->sp, &x, &y)); 1349f98b2f00SMatthew G. Knepley } 1350f98b2f00SMatthew G. Knepley PetscCall(VecRestoreArrayRead(u, &yy)); 13519566063dSJacob Faibussowitsch PetscCall(PetscDrawSPDraw(ctx->sp, PETSC_FALSE)); 13529566063dSJacob Faibussowitsch PetscCall(PetscDrawSPSave(ctx->sp)); 135360e16b1bSMatthew G. Knepley if (ctx->multispecies) PetscCall(DMSwarmRestoreField(dm, "species", NULL, NULL, (void **)&species)); 135460e16b1bSMatthew G. Knepley } 135560e16b1bSMatthew G. Knepley PetscFunctionReturn(PETSC_SUCCESS); 135660e16b1bSMatthew G. Knepley } 135760e16b1bSMatthew G. Knepley 135860e16b1bSMatthew G. Knepley /*@C 135920f4b53cSBarry Smith TSMonitorHGSwarmSolution - Graphically displays histograms of `DMSWARM` particles 136060e16b1bSMatthew G. Knepley 136160e16b1bSMatthew G. Knepley Input Parameters: 136220f4b53cSBarry Smith + ts - the `TS` context 136360e16b1bSMatthew G. Knepley . step - current time-step 136460e16b1bSMatthew G. Knepley . ptime - current time 136560e16b1bSMatthew G. Knepley . u - current solution 136620f4b53cSBarry Smith - dctx - the `TSMonitorSPCtx` object that contains all the options for the monitoring, this is created with `TSMonitorHGCtxCreate()` 136760e16b1bSMatthew G. Knepley 136820f4b53cSBarry Smith Options Database Keys: 136960e16b1bSMatthew G. Knepley + -ts_monitor_hg_swarm <n> - Monitor the solution every n steps, or -1 for plotting only the final solution 137060e16b1bSMatthew G. Knepley . -ts_monitor_hg_swarm_species <num> - Number of species to histogram 137160e16b1bSMatthew G. Knepley . -ts_monitor_hg_swarm_bins <num> - Number of histogram bins 137260e16b1bSMatthew G. Knepley - -ts_monitor_hg_swarm_velocity <bool> - Plot in velocity space, as opposed to coordinate space 137360e16b1bSMatthew G. Knepley 137460e16b1bSMatthew G. Knepley Level: intermediate 137560e16b1bSMatthew G. Knepley 137620f4b53cSBarry Smith Note: 137760e16b1bSMatthew G. Knepley This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 137860e16b1bSMatthew G. Knepley to be used during the `TS` integration. 137960e16b1bSMatthew G. Knepley 138060e16b1bSMatthew G. Knepley .seealso: `TSMonitoSet()` 138160e16b1bSMatthew G. Knepley @*/ 138260e16b1bSMatthew G. Knepley PetscErrorCode TSMonitorHGSwarmSolution(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dctx) 138360e16b1bSMatthew G. Knepley { 138460e16b1bSMatthew G. Knepley TSMonitorHGCtx ctx = (TSMonitorHGCtx)dctx; 138560e16b1bSMatthew G. Knepley PetscDraw draw; 138660e16b1bSMatthew G. Knepley DM sw; 138760e16b1bSMatthew G. Knepley const PetscScalar *yy; 138860e16b1bSMatthew G. Knepley PetscInt *species; 138960e16b1bSMatthew G. Knepley PetscInt dim, d = 0, Np, p, Ns, s; 139060e16b1bSMatthew G. Knepley 139160e16b1bSMatthew G. Knepley PetscFunctionBegin; 139260e16b1bSMatthew G. Knepley if (step < 0) PetscFunctionReturn(PETSC_SUCCESS); /* -1 indicates interpolated solution */ 139360e16b1bSMatthew G. Knepley PetscCall(TSGetDM(ts, &sw)); 139460e16b1bSMatthew G. Knepley PetscCall(DMGetDimension(sw, &dim)); 139560e16b1bSMatthew G. Knepley PetscCall(DMSwarmGetNumSpecies(sw, &Ns)); 139660e16b1bSMatthew G. Knepley Ns = PetscMin(Ns, ctx->Ns); 139760e16b1bSMatthew G. Knepley PetscCall(VecGetLocalSize(u, &Np)); 139860e16b1bSMatthew G. Knepley Np /= dim * 2; 139960e16b1bSMatthew G. Knepley if (!step) { 140060e16b1bSMatthew G. Knepley PetscDrawAxis axis; 140160e16b1bSMatthew G. Knepley char title[PETSC_MAX_PATH_LEN]; 140260e16b1bSMatthew G. Knepley 140360e16b1bSMatthew G. Knepley for (s = 0; s < Ns; ++s) { 140460e16b1bSMatthew G. Knepley PetscCall(PetscDrawHGGetAxis(ctx->hg[s], &axis)); 140560e16b1bSMatthew G. Knepley PetscCall(PetscSNPrintf(title, PETSC_MAX_PATH_LEN, "Species %" PetscInt_FMT, s)); 140660e16b1bSMatthew G. Knepley if (ctx->velocity) PetscCall(PetscDrawAxisSetLabels(axis, title, "V", "N")); 140760e16b1bSMatthew G. Knepley else PetscCall(PetscDrawAxisSetLabels(axis, title, "X", "N")); 140860e16b1bSMatthew G. Knepley } 140960e16b1bSMatthew G. Knepley } 141060e16b1bSMatthew G. Knepley if (((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason)) { 141160e16b1bSMatthew G. Knepley PetscCall(DMSwarmGetField(sw, "species", NULL, NULL, (void **)&species)); 141260e16b1bSMatthew G. Knepley for (s = 0; s < Ns; ++s) { 141360e16b1bSMatthew G. Knepley PetscCall(PetscDrawHGReset(ctx->hg[s])); 141460e16b1bSMatthew G. Knepley PetscCall(PetscDrawHGGetDraw(ctx->hg[s], &draw)); 141560e16b1bSMatthew G. Knepley PetscCall(PetscDrawClear(draw)); 141660e16b1bSMatthew G. Knepley PetscCall(PetscDrawFlush(draw)); 141760e16b1bSMatthew G. Knepley } 141860e16b1bSMatthew G. Knepley PetscCall(VecGetArrayRead(u, &yy)); 141960e16b1bSMatthew G. Knepley for (p = 0; p < Np; ++p) { 142060e16b1bSMatthew G. Knepley const PetscInt s = species[p] < Ns ? species[p] : 0; 142160e16b1bSMatthew G. Knepley PetscReal v; 142260e16b1bSMatthew G. Knepley 142360e16b1bSMatthew G. Knepley if (ctx->velocity) v = PetscRealPart(yy[p * dim * 2 + d + dim]); 142460e16b1bSMatthew G. Knepley else v = PetscRealPart(yy[p * dim * 2 + d]); 142560e16b1bSMatthew G. Knepley PetscCall(PetscDrawHGAddValue(ctx->hg[s], v)); 142660e16b1bSMatthew G. Knepley } 142760e16b1bSMatthew G. Knepley PetscCall(VecRestoreArrayRead(u, &yy)); 142860e16b1bSMatthew G. Knepley for (s = 0; s < Ns; ++s) { 142960e16b1bSMatthew G. Knepley PetscCall(PetscDrawHGDraw(ctx->hg[s])); 143060e16b1bSMatthew G. Knepley PetscCall(PetscDrawHGSave(ctx->hg[s])); 143160e16b1bSMatthew G. Knepley } 143260e16b1bSMatthew G. Knepley PetscCall(DMSwarmRestoreField(sw, "species", NULL, NULL, (void **)&species)); 1433d0c080abSJoseph Pusztay } 14343ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1435d0c080abSJoseph Pusztay } 1436d0c080abSJoseph Pusztay 1437d0c080abSJoseph Pusztay /*@C 1438bcf0153eSBarry Smith TSMonitorError - Monitors progress of the `TS` solvers by printing the 2 norm of the error at each timestep 1439d0c080abSJoseph Pusztay 1440c3339decSBarry Smith Collective 1441d0c080abSJoseph Pusztay 1442d0c080abSJoseph Pusztay Input Parameters: 1443bcf0153eSBarry Smith + ts - the `TS` context 1444d0c080abSJoseph Pusztay . step - current time-step 1445d0c080abSJoseph Pusztay . ptime - current time 1446d0c080abSJoseph Pusztay . u - current solution 1447b43aa488SJacob Faibussowitsch - vf - unused context 1448d0c080abSJoseph Pusztay 1449bcf0153eSBarry Smith Options Database Key: 1450bcf0153eSBarry Smith . -ts_monitor_error - create a graphical monitor of error history 1451bcf0153eSBarry Smith 1452d0c080abSJoseph Pusztay Level: intermediate 1453d0c080abSJoseph Pusztay 14543a61192cSBarry Smith Notes: 14553a61192cSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 1456bcf0153eSBarry Smith to be used during the `TS` integration. 14573a61192cSBarry Smith 1458bcf0153eSBarry Smith The user must provide the solution using `TSSetSolutionFunction()` to use this monitor. 1459d0c080abSJoseph Pusztay 14601cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSSetSolutionFunction()` 1461d0c080abSJoseph Pusztay @*/ 1462d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorError(TS ts, PetscInt step, PetscReal ptime, Vec u, PetscViewerAndFormat *vf) 1463d71ae5a4SJacob Faibussowitsch { 146407eaae0cSMatthew G. Knepley DM dm; 146507eaae0cSMatthew G. Knepley PetscDS ds = NULL; 146607eaae0cSMatthew G. Knepley PetscInt Nf = -1, f; 1467d0c080abSJoseph Pusztay PetscBool flg; 1468d0c080abSJoseph Pusztay 1469d0c080abSJoseph Pusztay PetscFunctionBegin; 14709566063dSJacob Faibussowitsch PetscCall(TSGetDM(ts, &dm)); 14719566063dSJacob Faibussowitsch if (dm) PetscCall(DMGetDS(dm, &ds)); 14729566063dSJacob Faibussowitsch if (ds) PetscCall(PetscDSGetNumFields(ds, &Nf)); 147307eaae0cSMatthew G. Knepley if (Nf <= 0) { 147407eaae0cSMatthew G. Knepley Vec y; 147507eaae0cSMatthew G. Knepley PetscReal nrm; 147607eaae0cSMatthew G. Knepley 14779566063dSJacob Faibussowitsch PetscCall(VecDuplicate(u, &y)); 14789566063dSJacob Faibussowitsch PetscCall(TSComputeSolutionFunction(ts, ptime, y)); 14799566063dSJacob Faibussowitsch PetscCall(VecAXPY(y, -1.0, u)); 14809566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)vf->viewer, PETSCVIEWERASCII, &flg)); 1481d0c080abSJoseph Pusztay if (flg) { 14829566063dSJacob Faibussowitsch PetscCall(VecNorm(y, NORM_2, &nrm)); 14839566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(vf->viewer, "2-norm of error %g\n", (double)nrm)); 1484d0c080abSJoseph Pusztay } 14859566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)vf->viewer, PETSCVIEWERDRAW, &flg)); 14861baa6e33SBarry Smith if (flg) PetscCall(VecView(y, vf->viewer)); 14879566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y)); 148807eaae0cSMatthew G. Knepley } else { 148907eaae0cSMatthew G. Knepley PetscErrorCode (**exactFuncs)(PetscInt dim, PetscReal time, const PetscReal x[], PetscInt Nf, PetscScalar *u, void *ctx); 149007eaae0cSMatthew G. Knepley void **ctxs; 149107eaae0cSMatthew G. Knepley Vec v; 149207eaae0cSMatthew G. Knepley PetscReal ferrors[1]; 149307eaae0cSMatthew G. Knepley 14949566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(Nf, &exactFuncs, Nf, &ctxs)); 14959566063dSJacob Faibussowitsch for (f = 0; f < Nf; ++f) PetscCall(PetscDSGetExactSolution(ds, f, &exactFuncs[f], &ctxs[f])); 14969566063dSJacob Faibussowitsch PetscCall(DMComputeL2FieldDiff(dm, ptime, exactFuncs, ctxs, u, ferrors)); 14979566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Timestep: %04d time = %-8.4g \t L_2 Error: [", (int)step, (double)ptime)); 149807eaae0cSMatthew G. Knepley for (f = 0; f < Nf; ++f) { 14999566063dSJacob Faibussowitsch if (f > 0) PetscCall(PetscPrintf(PETSC_COMM_WORLD, ", ")); 15009566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "%2.3g", (double)ferrors[f])); 150107eaae0cSMatthew G. Knepley } 15029566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "]\n")); 150307eaae0cSMatthew G. Knepley 15049566063dSJacob Faibussowitsch PetscCall(VecViewFromOptions(u, NULL, "-sol_vec_view")); 150507eaae0cSMatthew G. Knepley 15069566063dSJacob Faibussowitsch PetscCall(PetscOptionsHasName(NULL, NULL, "-exact_vec_view", &flg)); 150707eaae0cSMatthew G. Knepley if (flg) { 15089566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(dm, &v)); 15099566063dSJacob Faibussowitsch PetscCall(DMProjectFunction(dm, ptime, exactFuncs, ctxs, INSERT_ALL_VALUES, v)); 15109566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)v, "Exact Solution")); 15119566063dSJacob Faibussowitsch PetscCall(VecViewFromOptions(v, NULL, "-exact_vec_view")); 15129566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(dm, &v)); 151307eaae0cSMatthew G. Knepley } 15149566063dSJacob Faibussowitsch PetscCall(PetscFree2(exactFuncs, ctxs)); 151507eaae0cSMatthew G. Knepley } 15163ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1517d0c080abSJoseph Pusztay } 1518d0c080abSJoseph Pusztay 1519d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGSNESIterations(TS ts, PetscInt n, PetscReal ptime, Vec v, void *monctx) 1520d71ae5a4SJacob Faibussowitsch { 1521d0c080abSJoseph Pusztay TSMonitorLGCtx ctx = (TSMonitorLGCtx)monctx; 1522d0c080abSJoseph Pusztay PetscReal x = ptime, y; 1523d0c080abSJoseph Pusztay PetscInt its; 1524d0c080abSJoseph Pusztay 1525d0c080abSJoseph Pusztay PetscFunctionBegin; 15263ba16761SJacob Faibussowitsch if (n < 0) PetscFunctionReturn(PETSC_SUCCESS); /* -1 indicates interpolated solution */ 1527d0c080abSJoseph Pusztay if (!n) { 1528d0c080abSJoseph Pusztay PetscDrawAxis axis; 15299566063dSJacob Faibussowitsch PetscCall(PetscDrawLGGetAxis(ctx->lg, &axis)); 15309566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisSetLabels(axis, "Nonlinear iterations as function of time", "Time", "SNES Iterations")); 15319566063dSJacob Faibussowitsch PetscCall(PetscDrawLGReset(ctx->lg)); 1532d0c080abSJoseph Pusztay ctx->snes_its = 0; 1533d0c080abSJoseph Pusztay } 15349566063dSJacob Faibussowitsch PetscCall(TSGetSNESIterations(ts, &its)); 1535d0c080abSJoseph Pusztay y = its - ctx->snes_its; 15369566063dSJacob Faibussowitsch PetscCall(PetscDrawLGAddPoint(ctx->lg, &x, &y)); 1537d0c080abSJoseph Pusztay if (((ctx->howoften > 0) && (!(n % ctx->howoften)) && (n > -1)) || ((ctx->howoften == -1) && (n == -1))) { 15389566063dSJacob Faibussowitsch PetscCall(PetscDrawLGDraw(ctx->lg)); 15399566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSave(ctx->lg)); 1540d0c080abSJoseph Pusztay } 1541d0c080abSJoseph Pusztay ctx->snes_its = its; 15423ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1543d0c080abSJoseph Pusztay } 1544d0c080abSJoseph Pusztay 1545d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGKSPIterations(TS ts, PetscInt n, PetscReal ptime, Vec v, void *monctx) 1546d71ae5a4SJacob Faibussowitsch { 1547d0c080abSJoseph Pusztay TSMonitorLGCtx ctx = (TSMonitorLGCtx)monctx; 1548d0c080abSJoseph Pusztay PetscReal x = ptime, y; 1549d0c080abSJoseph Pusztay PetscInt its; 1550d0c080abSJoseph Pusztay 1551d0c080abSJoseph Pusztay PetscFunctionBegin; 15523ba16761SJacob Faibussowitsch if (n < 0) PetscFunctionReturn(PETSC_SUCCESS); /* -1 indicates interpolated solution */ 1553d0c080abSJoseph Pusztay if (!n) { 1554d0c080abSJoseph Pusztay PetscDrawAxis axis; 15559566063dSJacob Faibussowitsch PetscCall(PetscDrawLGGetAxis(ctx->lg, &axis)); 15569566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisSetLabels(axis, "Linear iterations as function of time", "Time", "KSP Iterations")); 15579566063dSJacob Faibussowitsch PetscCall(PetscDrawLGReset(ctx->lg)); 1558d0c080abSJoseph Pusztay ctx->ksp_its = 0; 1559d0c080abSJoseph Pusztay } 15609566063dSJacob Faibussowitsch PetscCall(TSGetKSPIterations(ts, &its)); 1561d0c080abSJoseph Pusztay y = its - ctx->ksp_its; 15629566063dSJacob Faibussowitsch PetscCall(PetscDrawLGAddPoint(ctx->lg, &x, &y)); 1563d0c080abSJoseph Pusztay if (((ctx->howoften > 0) && (!(n % ctx->howoften)) && (n > -1)) || ((ctx->howoften == -1) && (n == -1))) { 15649566063dSJacob Faibussowitsch PetscCall(PetscDrawLGDraw(ctx->lg)); 15659566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSave(ctx->lg)); 1566d0c080abSJoseph Pusztay } 1567d0c080abSJoseph Pusztay ctx->ksp_its = its; 15683ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1569d0c080abSJoseph Pusztay } 1570d0c080abSJoseph Pusztay 1571d0c080abSJoseph Pusztay /*@C 1572bcf0153eSBarry Smith TSMonitorEnvelopeCtxCreate - Creates a context for use with `TSMonitorEnvelope()` 1573d0c080abSJoseph Pusztay 1574c3339decSBarry Smith Collective 1575d0c080abSJoseph Pusztay 15762fe279fdSBarry Smith Input Parameter: 1577bcf0153eSBarry Smith . ts - the `TS` solver object 1578d0c080abSJoseph Pusztay 1579d0c080abSJoseph Pusztay Output Parameter: 1580d0c080abSJoseph Pusztay . ctx - the context 1581d0c080abSJoseph Pusztay 1582d0c080abSJoseph Pusztay Level: intermediate 1583d0c080abSJoseph Pusztay 15841cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorLGTimeStep()`, `TSMonitorSet()`, `TSMonitorLGSolution()`, `TSMonitorLGError()` 1585d0c080abSJoseph Pusztay @*/ 1586d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorEnvelopeCtxCreate(TS ts, TSMonitorEnvelopeCtx *ctx) 1587d71ae5a4SJacob Faibussowitsch { 1588d0c080abSJoseph Pusztay PetscFunctionBegin; 15899566063dSJacob Faibussowitsch PetscCall(PetscNew(ctx)); 15903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1591d0c080abSJoseph Pusztay } 1592d0c080abSJoseph Pusztay 1593d0c080abSJoseph Pusztay /*@C 1594d0c080abSJoseph Pusztay TSMonitorEnvelope - Monitors the maximum and minimum value of each component of the solution 1595d0c080abSJoseph Pusztay 1596c3339decSBarry Smith Collective 1597d0c080abSJoseph Pusztay 1598d0c080abSJoseph Pusztay Input Parameters: 1599195e9b02SBarry Smith + ts - the `TS` context 1600d0c080abSJoseph Pusztay . step - current time-step 1601d0c080abSJoseph Pusztay . ptime - current time 1602d0c080abSJoseph Pusztay . u - current solution 1603d0c080abSJoseph Pusztay - dctx - the envelope context 1604d0c080abSJoseph Pusztay 1605bcf0153eSBarry Smith Options Database Key: 160667b8a455SSatish Balay . -ts_monitor_envelope - determine maximum and minimum value of each component of the solution over the solution time 1607d0c080abSJoseph Pusztay 1608d0c080abSJoseph Pusztay Level: intermediate 1609d0c080abSJoseph Pusztay 1610d0c080abSJoseph Pusztay Notes: 1611bcf0153eSBarry Smith After a solve you can use `TSMonitorEnvelopeGetBounds()` to access the envelope 16123a61192cSBarry Smith 16133a61192cSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 1614bcf0153eSBarry Smith to be used during the `TS` integration. 1615d0c080abSJoseph Pusztay 16161cc06b55SBarry Smith .seealso: [](ch_ts), `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorEnvelopeGetBounds()`, `TSMonitorEnvelopeCtxCreate()` 1617d0c080abSJoseph Pusztay @*/ 1618d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorEnvelope(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dctx) 1619d71ae5a4SJacob Faibussowitsch { 1620d0c080abSJoseph Pusztay TSMonitorEnvelopeCtx ctx = (TSMonitorEnvelopeCtx)dctx; 1621d0c080abSJoseph Pusztay 1622d0c080abSJoseph Pusztay PetscFunctionBegin; 1623d0c080abSJoseph Pusztay if (!ctx->max) { 16249566063dSJacob Faibussowitsch PetscCall(VecDuplicate(u, &ctx->max)); 16259566063dSJacob Faibussowitsch PetscCall(VecDuplicate(u, &ctx->min)); 16269566063dSJacob Faibussowitsch PetscCall(VecCopy(u, ctx->max)); 16279566063dSJacob Faibussowitsch PetscCall(VecCopy(u, ctx->min)); 1628d0c080abSJoseph Pusztay } else { 16299566063dSJacob Faibussowitsch PetscCall(VecPointwiseMax(ctx->max, u, ctx->max)); 16309566063dSJacob Faibussowitsch PetscCall(VecPointwiseMin(ctx->min, u, ctx->min)); 1631d0c080abSJoseph Pusztay } 16323ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1633d0c080abSJoseph Pusztay } 1634d0c080abSJoseph Pusztay 1635d0c080abSJoseph Pusztay /*@C 1636d0c080abSJoseph Pusztay TSMonitorEnvelopeGetBounds - Gets the bounds for the components of the solution 1637d0c080abSJoseph Pusztay 1638c3339decSBarry Smith Collective 1639d0c080abSJoseph Pusztay 1640d0c080abSJoseph Pusztay Input Parameter: 1641bcf0153eSBarry Smith . ts - the `TS` context 1642d0c080abSJoseph Pusztay 1643d8d19677SJose E. Roman Output Parameters: 1644d0c080abSJoseph Pusztay + max - the maximum values 1645d0c080abSJoseph Pusztay - min - the minimum values 1646d0c080abSJoseph Pusztay 1647195e9b02SBarry Smith Level: intermediate 1648195e9b02SBarry Smith 1649d0c080abSJoseph Pusztay Notes: 1650bcf0153eSBarry Smith If the `TS` does not have a `TSMonitorEnvelopeCtx` associated with it then this function is ignored 1651d0c080abSJoseph Pusztay 16521cc06b55SBarry Smith .seealso: [](ch_ts), `TSMonitorEnvelopeCtx`, `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetDisplayVariables()` 1653d0c080abSJoseph Pusztay @*/ 1654d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorEnvelopeGetBounds(TS ts, Vec *max, Vec *min) 1655d71ae5a4SJacob Faibussowitsch { 1656d0c080abSJoseph Pusztay PetscInt i; 1657d0c080abSJoseph Pusztay 1658d0c080abSJoseph Pusztay PetscFunctionBegin; 1659d0c080abSJoseph Pusztay if (max) *max = NULL; 1660d0c080abSJoseph Pusztay if (min) *min = NULL; 1661d0c080abSJoseph Pusztay for (i = 0; i < ts->numbermonitors; i++) { 1662d0c080abSJoseph Pusztay if (ts->monitor[i] == TSMonitorEnvelope) { 1663d0c080abSJoseph Pusztay TSMonitorEnvelopeCtx ctx = (TSMonitorEnvelopeCtx)ts->monitorcontext[i]; 1664d0c080abSJoseph Pusztay if (max) *max = ctx->max; 1665d0c080abSJoseph Pusztay if (min) *min = ctx->min; 1666d0c080abSJoseph Pusztay break; 1667d0c080abSJoseph Pusztay } 1668d0c080abSJoseph Pusztay } 16693ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1670d0c080abSJoseph Pusztay } 1671d0c080abSJoseph Pusztay 1672d0c080abSJoseph Pusztay /*@C 1673bcf0153eSBarry Smith TSMonitorEnvelopeCtxDestroy - Destroys a context that was created with `TSMonitorEnvelopeCtxCreate()`. 1674d0c080abSJoseph Pusztay 1675c3339decSBarry Smith Collective 1676d0c080abSJoseph Pusztay 1677d0c080abSJoseph Pusztay Input Parameter: 1678d0c080abSJoseph Pusztay . ctx - the monitor context 1679d0c080abSJoseph Pusztay 1680d0c080abSJoseph Pusztay Level: intermediate 1681d0c080abSJoseph Pusztay 16821cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorLGCtxCreate()`, `TSMonitorSet()`, `TSMonitorLGTimeStep()` 1683d0c080abSJoseph Pusztay @*/ 1684d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorEnvelopeCtxDestroy(TSMonitorEnvelopeCtx *ctx) 1685d71ae5a4SJacob Faibussowitsch { 1686d0c080abSJoseph Pusztay PetscFunctionBegin; 16879566063dSJacob Faibussowitsch PetscCall(VecDestroy(&(*ctx)->min)); 16889566063dSJacob Faibussowitsch PetscCall(VecDestroy(&(*ctx)->max)); 16899566063dSJacob Faibussowitsch PetscCall(PetscFree(*ctx)); 16903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1691d0c080abSJoseph Pusztay } 1692d0c080abSJoseph Pusztay 1693d0c080abSJoseph Pusztay /*@C 1694bcf0153eSBarry Smith TSDMSwarmMonitorMoments - Monitors the first three moments of a `DMSWARM` being evolved by the `TS` 1695d0c080abSJoseph Pusztay 169620f4b53cSBarry Smith Not Collective 1697d0c080abSJoseph Pusztay 1698d0c080abSJoseph Pusztay Input Parameters: 1699bcf0153eSBarry Smith + ts - the `TS` context 1700d0c080abSJoseph Pusztay . step - current timestep 1701d0c080abSJoseph Pusztay . t - current time 170214d0ab18SJacob Faibussowitsch . U - current solution 170314d0ab18SJacob Faibussowitsch - vf - not used 1704d0c080abSJoseph Pusztay 1705bcf0153eSBarry Smith Options Database Key: 170667b8a455SSatish Balay . -ts_dmswarm_monitor_moments - Monitor moments of particle distribution 1707d0c080abSJoseph Pusztay 1708d0c080abSJoseph Pusztay Level: intermediate 1709d0c080abSJoseph Pusztay 1710d0c080abSJoseph Pusztay Notes: 1711bcf0153eSBarry Smith This requires a `DMSWARM` be attached to the `TS`. 1712d0c080abSJoseph Pusztay 17133a61192cSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 17143a61192cSBarry Smith to be used during the TS integration. 17153a61192cSBarry Smith 17161cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `DMSWARM` 1717d0c080abSJoseph Pusztay @*/ 1718d71ae5a4SJacob Faibussowitsch PetscErrorCode TSDMSwarmMonitorMoments(TS ts, PetscInt step, PetscReal t, Vec U, PetscViewerAndFormat *vf) 1719d71ae5a4SJacob Faibussowitsch { 1720d0c080abSJoseph Pusztay DM sw; 1721d0c080abSJoseph Pusztay const PetscScalar *u; 1722d0c080abSJoseph Pusztay PetscReal m = 1.0, totE = 0., totMom[3] = {0., 0., 0.}; 1723d0c080abSJoseph Pusztay PetscInt dim, d, Np, p; 1724d0c080abSJoseph Pusztay MPI_Comm comm; 1725d0c080abSJoseph Pusztay 1726d0c080abSJoseph Pusztay PetscFunctionBeginUser; 172714d0ab18SJacob Faibussowitsch (void)t; 172814d0ab18SJacob Faibussowitsch (void)vf; 17299566063dSJacob Faibussowitsch PetscCall(TSGetDM(ts, &sw)); 17303ba16761SJacob Faibussowitsch if (!sw || step % ts->monitorFrequency != 0) PetscFunctionReturn(PETSC_SUCCESS); 17319566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)ts, &comm)); 17329566063dSJacob Faibussowitsch PetscCall(DMGetDimension(sw, &dim)); 17339566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(U, &Np)); 1734d0c080abSJoseph Pusztay Np /= dim; 17359566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(U, &u)); 1736d0c080abSJoseph Pusztay for (p = 0; p < Np; ++p) { 1737d0c080abSJoseph Pusztay for (d = 0; d < dim; ++d) { 1738d0c080abSJoseph Pusztay totE += PetscRealPart(u[p * dim + d] * u[p * dim + d]); 1739d0c080abSJoseph Pusztay totMom[d] += PetscRealPart(u[p * dim + d]); 1740d0c080abSJoseph Pusztay } 1741d0c080abSJoseph Pusztay } 17429566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(U, &u)); 1743d0c080abSJoseph Pusztay for (d = 0; d < dim; ++d) totMom[d] *= m; 1744d0c080abSJoseph Pusztay totE *= 0.5 * m; 174563a3b9bcSJacob Faibussowitsch PetscCall(PetscPrintf(comm, "Step %4" PetscInt_FMT " Total Energy: %10.8lf", step, (double)totE)); 174663a3b9bcSJacob Faibussowitsch for (d = 0; d < dim; ++d) PetscCall(PetscPrintf(comm, " Total Momentum %c: %10.8lf", (char)('x' + d), (double)totMom[d])); 17479566063dSJacob Faibussowitsch PetscCall(PetscPrintf(comm, "\n")); 17483ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1749d0c080abSJoseph Pusztay } 1750