1c4762a1bSJed Brown 2c4762a1bSJed Brown static char help[] ="Solves the time independent Bratu problem using pseudo-timestepping."; 3c4762a1bSJed Brown 4c4762a1bSJed Brown /* 5c4762a1bSJed Brown Concepts: TS^pseudo-timestepping 6ee300463SSatish Balay Concepts: TS^pseudo-timestepping 7c4762a1bSJed Brown Concepts: TS^nonlinear problems 8c4762a1bSJed Brown Processors: 1 9c4762a1bSJed Brown 10c4762a1bSJed Brown */ 11c4762a1bSJed Brown 12c4762a1bSJed Brown /* ------------------------------------------------------------------------ 13c4762a1bSJed Brown 14c4762a1bSJed Brown This code demonstrates how one may solve a nonlinear problem 15c4762a1bSJed Brown with pseudo-timestepping. In this simple example, the pseudo-timestep 16c4762a1bSJed Brown is the same for all grid points, i.e., this is equivalent to using 17c4762a1bSJed Brown the backward Euler method with a variable timestep. 18c4762a1bSJed Brown 19c4762a1bSJed Brown Note: This example does not require pseudo-timestepping since it 20c4762a1bSJed Brown is an easy nonlinear problem, but it is included to demonstrate how 21c4762a1bSJed Brown the pseudo-timestepping may be done. 22c4762a1bSJed Brown 23c4762a1bSJed Brown See snes/tutorials/ex4.c[ex4f.F] and 24c4762a1bSJed Brown snes/tutorials/ex5.c[ex5f.F] where the problem is described 25c4762a1bSJed Brown and solved using Newton's method alone. 26c4762a1bSJed Brown 27c4762a1bSJed Brown ----------------------------------------------------------------------------- */ 28c4762a1bSJed Brown /* 29c4762a1bSJed Brown Include "petscts.h" to use the PETSc timestepping routines. Note that 30c4762a1bSJed Brown this file automatically includes "petscsys.h" and other lower-level 31c4762a1bSJed Brown PETSc include files. 32c4762a1bSJed Brown */ 33c4762a1bSJed Brown #include <petscts.h> 34c4762a1bSJed Brown 35c4762a1bSJed Brown /* 36c4762a1bSJed Brown Create an application context to contain data needed by the 37c4762a1bSJed Brown application-provided call-back routines, FormJacobian() and 38c4762a1bSJed Brown FormFunction(). 39c4762a1bSJed Brown */ 40c4762a1bSJed Brown typedef struct { 41c4762a1bSJed Brown PetscReal param; /* test problem parameter */ 42c4762a1bSJed Brown PetscInt mx; /* Discretization in x-direction */ 43c4762a1bSJed Brown PetscInt my; /* Discretization in y-direction */ 44c4762a1bSJed Brown } AppCtx; 45c4762a1bSJed Brown 46c4762a1bSJed Brown /* 47c4762a1bSJed Brown User-defined routines 48c4762a1bSJed Brown */ 49c4762a1bSJed Brown extern PetscErrorCode FormJacobian(TS,PetscReal,Vec,Mat,Mat,void*), FormFunction(TS,PetscReal,Vec,Vec,void*), FormInitialGuess(Vec,AppCtx*); 50c4762a1bSJed Brown 51c4762a1bSJed Brown int main(int argc,char **argv) 52c4762a1bSJed Brown { 53c4762a1bSJed Brown TS ts; /* timestepping context */ 54c4762a1bSJed Brown Vec x,r; /* solution, residual vectors */ 55c4762a1bSJed Brown Mat J; /* Jacobian matrix */ 56c4762a1bSJed Brown AppCtx user; /* user-defined work context */ 57c4762a1bSJed Brown PetscInt its,N; /* iterations for convergence */ 58c4762a1bSJed Brown PetscErrorCode ierr; 59c4762a1bSJed Brown PetscReal param_max = 6.81,param_min = 0.,dt; 60c4762a1bSJed Brown PetscReal ftime; 61c4762a1bSJed Brown PetscMPIInt size; 62c4762a1bSJed Brown 63c4762a1bSJed Brown ierr = PetscInitialize(&argc,&argv,NULL,help);if (ierr) return ierr; 64*5f80ce2aSJacob Faibussowitsch CHKERRMPI(MPI_Comm_size(PETSC_COMM_WORLD,&size)); 653c633725SBarry Smith PetscCheck(size == 1,PETSC_COMM_WORLD,PETSC_ERR_WRONG_MPI_SIZE,"This is a uniprocessor example only"); 66c4762a1bSJed Brown 67c4762a1bSJed Brown user.mx = 4; 68c4762a1bSJed Brown user.my = 4; 69c4762a1bSJed Brown user.param = 6.0; 70c4762a1bSJed Brown 71c4762a1bSJed Brown /* 72c4762a1bSJed Brown Allow user to set the grid dimensions and nonlinearity parameter at run-time 73c4762a1bSJed Brown */ 74c4762a1bSJed Brown PetscOptionsGetInt(NULL,NULL,"-mx",&user.mx,NULL); 75c4762a1bSJed Brown PetscOptionsGetInt(NULL,NULL,"-my",&user.my,NULL); 76c4762a1bSJed Brown N = user.mx*user.my; 77c4762a1bSJed Brown dt = .5/PetscMax(user.mx,user.my); 78c4762a1bSJed Brown PetscOptionsGetReal(NULL,NULL,"-param",&user.param,NULL); 793c633725SBarry Smith PetscCheck(user.param < param_max && user.param >= param_min,PETSC_COMM_WORLD,PETSC_ERR_ARG_OUTOFRANGE,"Parameter is out of range"); 80c4762a1bSJed Brown 81c4762a1bSJed Brown /* 82c4762a1bSJed Brown Create vectors to hold the solution and function value 83c4762a1bSJed Brown */ 84*5f80ce2aSJacob Faibussowitsch CHKERRQ(VecCreateSeq(PETSC_COMM_SELF,N,&x)); 85*5f80ce2aSJacob Faibussowitsch CHKERRQ(VecDuplicate(x,&r)); 86c4762a1bSJed Brown 87c4762a1bSJed Brown /* 88c4762a1bSJed Brown Create matrix to hold Jacobian. Preallocate 5 nonzeros per row 89c4762a1bSJed Brown in the sparse matrix. Note that this is not the optimal strategy; see 90c4762a1bSJed Brown the Performance chapter of the users manual for information on 91c4762a1bSJed Brown preallocating memory in sparse matrices. 92c4762a1bSJed Brown */ 93*5f80ce2aSJacob Faibussowitsch CHKERRQ(MatCreateSeqAIJ(PETSC_COMM_SELF,N,N,5,0,&J)); 94c4762a1bSJed Brown 95c4762a1bSJed Brown /* 96c4762a1bSJed Brown Create timestepper context 97c4762a1bSJed Brown */ 98*5f80ce2aSJacob Faibussowitsch CHKERRQ(TSCreate(PETSC_COMM_WORLD,&ts)); 99*5f80ce2aSJacob Faibussowitsch CHKERRQ(TSSetProblemType(ts,TS_NONLINEAR)); 100c4762a1bSJed Brown 101c4762a1bSJed Brown /* 102c4762a1bSJed Brown Tell the timestepper context where to compute solutions 103c4762a1bSJed Brown */ 104*5f80ce2aSJacob Faibussowitsch CHKERRQ(TSSetSolution(ts,x)); 105c4762a1bSJed Brown 106c4762a1bSJed Brown /* 107c4762a1bSJed Brown Provide the call-back for the nonlinear function we are 108c4762a1bSJed Brown evaluating. Thus whenever the timestepping routines need the 109c4762a1bSJed Brown function they will call this routine. Note the final argument 110c4762a1bSJed Brown is the application context used by the call-back functions. 111c4762a1bSJed Brown */ 112*5f80ce2aSJacob Faibussowitsch CHKERRQ(TSSetRHSFunction(ts,NULL,FormFunction,&user)); 113c4762a1bSJed Brown 114c4762a1bSJed Brown /* 115c4762a1bSJed Brown Set the Jacobian matrix and the function used to compute 116c4762a1bSJed Brown Jacobians. 117c4762a1bSJed Brown */ 118*5f80ce2aSJacob Faibussowitsch CHKERRQ(TSSetRHSJacobian(ts,J,J,FormJacobian,&user)); 119c4762a1bSJed Brown 120c4762a1bSJed Brown /* 121c4762a1bSJed Brown Form the initial guess for the problem 122c4762a1bSJed Brown */ 123*5f80ce2aSJacob Faibussowitsch CHKERRQ(FormInitialGuess(x,&user)); 124c4762a1bSJed Brown 125c4762a1bSJed Brown /* 126c4762a1bSJed Brown This indicates that we are using pseudo timestepping to 127c4762a1bSJed Brown find a steady state solution to the nonlinear problem. 128c4762a1bSJed Brown */ 129*5f80ce2aSJacob Faibussowitsch CHKERRQ(TSSetType(ts,TSPSEUDO)); 130c4762a1bSJed Brown 131c4762a1bSJed Brown /* 132c4762a1bSJed Brown Set the initial time to start at (this is arbitrary for 133c4762a1bSJed Brown steady state problems); and the initial timestep given above 134c4762a1bSJed Brown */ 135*5f80ce2aSJacob Faibussowitsch CHKERRQ(TSSetTimeStep(ts,dt)); 136c4762a1bSJed Brown 137c4762a1bSJed Brown /* 138c4762a1bSJed Brown Set a large number of timesteps and final duration time 139c4762a1bSJed Brown to insure convergence to steady state. 140c4762a1bSJed Brown */ 141*5f80ce2aSJacob Faibussowitsch CHKERRQ(TSSetMaxSteps(ts,10000)); 142*5f80ce2aSJacob Faibussowitsch CHKERRQ(TSSetMaxTime(ts,1e12)); 143*5f80ce2aSJacob Faibussowitsch CHKERRQ(TSSetExactFinalTime(ts,TS_EXACTFINALTIME_STEPOVER)); 144c4762a1bSJed Brown 145c4762a1bSJed Brown /* 146c4762a1bSJed Brown Use the default strategy for increasing the timestep 147c4762a1bSJed Brown */ 148*5f80ce2aSJacob Faibussowitsch CHKERRQ(TSPseudoSetTimeStep(ts,TSPseudoTimeStepDefault,0)); 149c4762a1bSJed Brown 150c4762a1bSJed Brown /* 151c4762a1bSJed Brown Set any additional options from the options database. This 152c4762a1bSJed Brown includes all options for the nonlinear and linear solvers used 153c4762a1bSJed Brown internally the timestepping routines. 154c4762a1bSJed Brown */ 155*5f80ce2aSJacob Faibussowitsch CHKERRQ(TSSetFromOptions(ts)); 156c4762a1bSJed Brown 157*5f80ce2aSJacob Faibussowitsch CHKERRQ(TSSetUp(ts)); 158c4762a1bSJed Brown 159c4762a1bSJed Brown /* 160c4762a1bSJed Brown Perform the solve. This is where the timestepping takes place. 161c4762a1bSJed Brown */ 162*5f80ce2aSJacob Faibussowitsch CHKERRQ(TSSolve(ts,x)); 163*5f80ce2aSJacob Faibussowitsch CHKERRQ(TSGetSolveTime(ts,&ftime)); 164c4762a1bSJed Brown 165c4762a1bSJed Brown /* 166c4762a1bSJed Brown Get the number of steps 167c4762a1bSJed Brown */ 168*5f80ce2aSJacob Faibussowitsch CHKERRQ(TSGetStepNumber(ts,&its)); 169c4762a1bSJed Brown 170*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscPrintf(PETSC_COMM_WORLD,"Number of pseudo timesteps = %D final time %4.2e\n",its,(double)ftime)); 171c4762a1bSJed Brown 172c4762a1bSJed Brown /* 173c4762a1bSJed Brown Free the data structures constructed above 174c4762a1bSJed Brown */ 175*5f80ce2aSJacob Faibussowitsch CHKERRQ(VecDestroy(&x)); 176*5f80ce2aSJacob Faibussowitsch CHKERRQ(VecDestroy(&r)); 177*5f80ce2aSJacob Faibussowitsch CHKERRQ(MatDestroy(&J)); 178*5f80ce2aSJacob Faibussowitsch CHKERRQ(TSDestroy(&ts)); 179c4762a1bSJed Brown ierr = PetscFinalize(); 180c4762a1bSJed Brown return ierr; 181c4762a1bSJed Brown } 182c4762a1bSJed Brown /* ------------------------------------------------------------------ */ 183c4762a1bSJed Brown /* Bratu (Solid Fuel Ignition) Test Problem */ 184c4762a1bSJed Brown /* ------------------------------------------------------------------ */ 185c4762a1bSJed Brown 186c4762a1bSJed Brown /* -------------------- Form initial approximation ----------------- */ 187c4762a1bSJed Brown 188c4762a1bSJed Brown PetscErrorCode FormInitialGuess(Vec X,AppCtx *user) 189c4762a1bSJed Brown { 190c4762a1bSJed Brown PetscInt i,j,row,mx,my; 191c4762a1bSJed Brown PetscReal one = 1.0,lambda; 192c4762a1bSJed Brown PetscReal temp1,temp,hx,hy; 193c4762a1bSJed Brown PetscScalar *x; 194c4762a1bSJed Brown 195c4762a1bSJed Brown mx = user->mx; 196c4762a1bSJed Brown my = user->my; 197c4762a1bSJed Brown lambda = user->param; 198c4762a1bSJed Brown 199c4762a1bSJed Brown hx = one / (PetscReal)(mx-1); 200c4762a1bSJed Brown hy = one / (PetscReal)(my-1); 201c4762a1bSJed Brown 202*5f80ce2aSJacob Faibussowitsch CHKERRQ(VecGetArray(X,&x)); 203c4762a1bSJed Brown temp1 = lambda/(lambda + one); 204c4762a1bSJed Brown for (j=0; j<my; j++) { 205c4762a1bSJed Brown temp = (PetscReal)(PetscMin(j,my-j-1))*hy; 206c4762a1bSJed Brown for (i=0; i<mx; i++) { 207c4762a1bSJed Brown row = i + j*mx; 208c4762a1bSJed Brown if (i == 0 || j == 0 || i == mx-1 || j == my-1) { 209c4762a1bSJed Brown x[row] = 0.0; 210c4762a1bSJed Brown continue; 211c4762a1bSJed Brown } 212c4762a1bSJed Brown x[row] = temp1*PetscSqrtReal(PetscMin((PetscReal)(PetscMin(i,mx-i-1))*hx,temp)); 213c4762a1bSJed Brown } 214c4762a1bSJed Brown } 215*5f80ce2aSJacob Faibussowitsch CHKERRQ(VecRestoreArray(X,&x)); 216c4762a1bSJed Brown return 0; 217c4762a1bSJed Brown } 218c4762a1bSJed Brown /* -------------------- Evaluate Function F(x) --------------------- */ 219c4762a1bSJed Brown 220c4762a1bSJed Brown PetscErrorCode FormFunction(TS ts,PetscReal t,Vec X,Vec F,void *ptr) 221c4762a1bSJed Brown { 222c4762a1bSJed Brown AppCtx *user = (AppCtx*)ptr; 223c4762a1bSJed Brown PetscInt i,j,row,mx,my; 224c4762a1bSJed Brown PetscReal two = 2.0,one = 1.0,lambda; 225c4762a1bSJed Brown PetscReal hx,hy,hxdhy,hydhx; 226c4762a1bSJed Brown PetscScalar ut,ub,ul,ur,u,uxx,uyy,sc,*f; 227c4762a1bSJed Brown const PetscScalar *x; 228c4762a1bSJed Brown 229c4762a1bSJed Brown mx = user->mx; 230c4762a1bSJed Brown my = user->my; 231c4762a1bSJed Brown lambda = user->param; 232c4762a1bSJed Brown 233c4762a1bSJed Brown hx = one / (PetscReal)(mx-1); 234c4762a1bSJed Brown hy = one / (PetscReal)(my-1); 235c4762a1bSJed Brown sc = hx*hy; 236c4762a1bSJed Brown hxdhy = hx/hy; 237c4762a1bSJed Brown hydhx = hy/hx; 238c4762a1bSJed Brown 239*5f80ce2aSJacob Faibussowitsch CHKERRQ(VecGetArrayRead(X,&x)); 240*5f80ce2aSJacob Faibussowitsch CHKERRQ(VecGetArray(F,&f)); 241c4762a1bSJed Brown for (j=0; j<my; j++) { 242c4762a1bSJed Brown for (i=0; i<mx; i++) { 243c4762a1bSJed Brown row = i + j*mx; 244c4762a1bSJed Brown if (i == 0 || j == 0 || i == mx-1 || j == my-1) { 245c4762a1bSJed Brown f[row] = x[row]; 246c4762a1bSJed Brown continue; 247c4762a1bSJed Brown } 248c4762a1bSJed Brown u = x[row]; 249c4762a1bSJed Brown ub = x[row - mx]; 250c4762a1bSJed Brown ul = x[row - 1]; 251c4762a1bSJed Brown ut = x[row + mx]; 252c4762a1bSJed Brown ur = x[row + 1]; 253c4762a1bSJed Brown uxx = (-ur + two*u - ul)*hydhx; 254c4762a1bSJed Brown uyy = (-ut + two*u - ub)*hxdhy; 255c4762a1bSJed Brown f[row] = -uxx + -uyy + sc*lambda*PetscExpScalar(u); 256c4762a1bSJed Brown } 257c4762a1bSJed Brown } 258*5f80ce2aSJacob Faibussowitsch CHKERRQ(VecRestoreArrayRead(X,&x)); 259*5f80ce2aSJacob Faibussowitsch CHKERRQ(VecRestoreArray(F,&f)); 260c4762a1bSJed Brown return 0; 261c4762a1bSJed Brown } 262c4762a1bSJed Brown /* -------------------- Evaluate Jacobian F'(x) -------------------- */ 263c4762a1bSJed Brown 264c4762a1bSJed Brown /* 265c4762a1bSJed Brown Calculate the Jacobian matrix J(X,t). 266c4762a1bSJed Brown 267c4762a1bSJed Brown Note: We put the Jacobian in the preconditioner storage B instead of J. This 268c4762a1bSJed Brown way we can give the -snes_mf_operator flag to check our work. This replaces 269c4762a1bSJed Brown J with a finite difference approximation, using our analytic Jacobian B for 270c4762a1bSJed Brown the preconditioner. 271c4762a1bSJed Brown */ 272c4762a1bSJed Brown PetscErrorCode FormJacobian(TS ts,PetscReal t,Vec X,Mat J,Mat B,void *ptr) 273c4762a1bSJed Brown { 274c4762a1bSJed Brown AppCtx *user = (AppCtx*)ptr; 275c4762a1bSJed Brown PetscInt i,j,row,mx,my,col[5]; 276c4762a1bSJed Brown PetscScalar two = 2.0,one = 1.0,lambda,v[5],sc; 277c4762a1bSJed Brown const PetscScalar *x; 278c4762a1bSJed Brown PetscReal hx,hy,hxdhy,hydhx; 279c4762a1bSJed Brown 280c4762a1bSJed Brown mx = user->mx; 281c4762a1bSJed Brown my = user->my; 282c4762a1bSJed Brown lambda = user->param; 283c4762a1bSJed Brown 284c4762a1bSJed Brown hx = 1.0 / (PetscReal)(mx-1); 285c4762a1bSJed Brown hy = 1.0 / (PetscReal)(my-1); 286c4762a1bSJed Brown sc = hx*hy; 287c4762a1bSJed Brown hxdhy = hx/hy; 288c4762a1bSJed Brown hydhx = hy/hx; 289c4762a1bSJed Brown 290*5f80ce2aSJacob Faibussowitsch CHKERRQ(VecGetArrayRead(X,&x)); 291c4762a1bSJed Brown for (j=0; j<my; j++) { 292c4762a1bSJed Brown for (i=0; i<mx; i++) { 293c4762a1bSJed Brown row = i + j*mx; 294c4762a1bSJed Brown if (i == 0 || j == 0 || i == mx-1 || j == my-1) { 295*5f80ce2aSJacob Faibussowitsch CHKERRQ(MatSetValues(B,1,&row,1,&row,&one,INSERT_VALUES)); 296c4762a1bSJed Brown continue; 297c4762a1bSJed Brown } 298c4762a1bSJed Brown v[0] = hxdhy; col[0] = row - mx; 299c4762a1bSJed Brown v[1] = hydhx; col[1] = row - 1; 300c4762a1bSJed Brown v[2] = -two*(hydhx + hxdhy) + sc*lambda*PetscExpScalar(x[row]); col[2] = row; 301c4762a1bSJed Brown v[3] = hydhx; col[3] = row + 1; 302c4762a1bSJed Brown v[4] = hxdhy; col[4] = row + mx; 303*5f80ce2aSJacob Faibussowitsch CHKERRQ(MatSetValues(B,1,&row,5,col,v,INSERT_VALUES)); 304c4762a1bSJed Brown } 305c4762a1bSJed Brown } 306*5f80ce2aSJacob Faibussowitsch CHKERRQ(VecRestoreArrayRead(X,&x)); 307*5f80ce2aSJacob Faibussowitsch CHKERRQ(MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY)); 308*5f80ce2aSJacob Faibussowitsch CHKERRQ(MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY)); 309c4762a1bSJed Brown if (J != B) { 310*5f80ce2aSJacob Faibussowitsch CHKERRQ(MatAssemblyBegin(J,MAT_FINAL_ASSEMBLY)); 311*5f80ce2aSJacob Faibussowitsch CHKERRQ(MatAssemblyEnd(J,MAT_FINAL_ASSEMBLY)); 312c4762a1bSJed Brown } 313c4762a1bSJed Brown return 0; 314c4762a1bSJed Brown } 315c4762a1bSJed Brown 316c4762a1bSJed Brown /*TEST 317c4762a1bSJed Brown 318c4762a1bSJed Brown test: 319c4762a1bSJed Brown args: -ksp_gmres_cgs_refinement_type refine_always -snes_type newtonls -ts_monitor_pseudo -snes_atol 1.e-7 -ts_pseudo_frtol 1.e-5 -ts_view draw:tikz:fig.tex 320c4762a1bSJed Brown 321c4762a1bSJed Brown test: 322c4762a1bSJed Brown suffix: 2 323c4762a1bSJed Brown args: -ts_monitor_pseudo -ts_pseudo_frtol 1.e-5 324c4762a1bSJed Brown 325c4762a1bSJed Brown TEST*/ 326