18cd53115SBarry Smith 2af0996ceSBarry Smith #include <petsc/private/sfimpl.h> /*I "petscsf.h" I*/ 395fce210SBarry Smith 495fce210SBarry Smith typedef struct _n_PetscSFBasicPack *PetscSFBasicPack; 595fce210SBarry Smith struct _n_PetscSFBasicPack { 62a74e5f4SJed Brown void (*Pack)(PetscInt,PetscInt,const PetscInt*,const void*,void*); 72a74e5f4SJed Brown void (*UnpackInsert)(PetscInt,PetscInt,const PetscInt*,void*,const void*); 82a74e5f4SJed Brown void (*UnpackAdd)(PetscInt,PetscInt,const PetscInt*,void*,const void*); 92a74e5f4SJed Brown void (*UnpackMin)(PetscInt,PetscInt,const PetscInt*,void*,const void*); 102a74e5f4SJed Brown void (*UnpackMax)(PetscInt,PetscInt,const PetscInt*,void*,const void*); 112a74e5f4SJed Brown void (*UnpackMinloc)(PetscInt,PetscInt,const PetscInt*,void*,const void*); 122a74e5f4SJed Brown void (*UnpackMaxloc)(PetscInt,PetscInt,const PetscInt*,void*,const void*); 132a74e5f4SJed Brown void (*UnpackMult)(PetscInt,PetscInt,const PetscInt*,void*,const void *); 142a74e5f4SJed Brown void (*UnpackLAND)(PetscInt,PetscInt,const PetscInt*,void*,const void *); 152a74e5f4SJed Brown void (*UnpackBAND)(PetscInt,PetscInt,const PetscInt*,void*,const void *); 162a74e5f4SJed Brown void (*UnpackLOR)(PetscInt,PetscInt,const PetscInt*,void*,const void *); 172a74e5f4SJed Brown void (*UnpackBOR)(PetscInt,PetscInt,const PetscInt*,void*,const void *); 182a74e5f4SJed Brown void (*UnpackLXOR)(PetscInt,PetscInt,const PetscInt*,void*,const void *); 192a74e5f4SJed Brown void (*UnpackBXOR)(PetscInt,PetscInt,const PetscInt*,void*,const void *); 202a74e5f4SJed Brown void (*FetchAndInsert)(PetscInt,PetscInt,const PetscInt*,void*,void*); 212a74e5f4SJed Brown void (*FetchAndAdd)(PetscInt,PetscInt,const PetscInt*,void*,void*); 222a74e5f4SJed Brown void (*FetchAndMin)(PetscInt,PetscInt,const PetscInt*,void*,void*); 232a74e5f4SJed Brown void (*FetchAndMax)(PetscInt,PetscInt,const PetscInt*,void*,void*); 242a74e5f4SJed Brown void (*FetchAndMinloc)(PetscInt,PetscInt,const PetscInt*,void*,void*); 252a74e5f4SJed Brown void (*FetchAndMaxloc)(PetscInt,PetscInt,const PetscInt*,void*,void*); 262a74e5f4SJed Brown void (*FetchAndMult)(PetscInt,PetscInt,const PetscInt*,void*,void*); 272a74e5f4SJed Brown void (*FetchAndLAND)(PetscInt,PetscInt,const PetscInt*,void*,void*); 282a74e5f4SJed Brown void (*FetchAndBAND)(PetscInt,PetscInt,const PetscInt*,void*,void*); 292a74e5f4SJed Brown void (*FetchAndLOR)(PetscInt,PetscInt,const PetscInt*,void*,void*); 302a74e5f4SJed Brown void (*FetchAndBOR)(PetscInt,PetscInt,const PetscInt*,void*,void*); 312a74e5f4SJed Brown void (*FetchAndLXOR)(PetscInt,PetscInt,const PetscInt*,void*,void*); 322a74e5f4SJed Brown void (*FetchAndBXOR)(PetscInt,PetscInt,const PetscInt*,void*,void*); 3395fce210SBarry Smith 3495fce210SBarry Smith MPI_Datatype unit; 3595fce210SBarry Smith size_t unitbytes; /* Number of bytes in a unit */ 362a74e5f4SJed Brown PetscInt bs; /* Number of basic units in a unit */ 3795fce210SBarry Smith const void *key; /* Array used as key for operation */ 38bf39f1bfSJed Brown char **root; /* Packed root data, indexed by leaf rank */ 39bf39f1bfSJed Brown char **leaf; /* Packed leaf data, indexed by root rank */ 4095fce210SBarry Smith MPI_Request *requests; /* Array of root requests followed by leaf requests */ 4195fce210SBarry Smith PetscSFBasicPack next; 4295fce210SBarry Smith }; 4395fce210SBarry Smith 4495fce210SBarry Smith typedef struct { 4595fce210SBarry Smith PetscMPIInt tag; 46cf4b5b4fSJed Brown PetscMPIInt niranks; /* Number of incoming ranks (ranks accessing my roots) */ 47c943f53fSJed Brown PetscMPIInt ndiranks; /* Number of incoming ranks (ranks accessing my roots) in distinguished set */ 4895fce210SBarry Smith PetscMPIInt *iranks; /* Array of ranks that reference my roots */ 4995fce210SBarry Smith PetscInt itotal; /* Total number of graph edges referencing my roots */ 5095fce210SBarry Smith PetscInt *ioffset; /* Array of length niranks+1 holding offset in irootloc[] for each rank */ 5195fce210SBarry Smith PetscInt *irootloc; /* Incoming roots referenced by ranks starting at ioffset[rank] */ 5295fce210SBarry Smith PetscSFBasicPack avail; /* One or more entries per MPI Datatype, lazily constructed */ 5395fce210SBarry Smith PetscSFBasicPack inuse; /* Buffers being used for transactions that have not yet completed */ 5495fce210SBarry Smith } PetscSF_Basic; 5595fce210SBarry Smith 565cf5d571SLisandro Dalcin #if !defined(PETSC_HAVE_MPI_TYPE_DUP) 575cf5d571SLisandro Dalcin PETSC_STATIC_INLINE int MPI_Type_dup(MPI_Datatype datatype,MPI_Datatype *newtype) 5895fce210SBarry Smith { 595cf5d571SLisandro Dalcin int ierr; 605cf5d571SLisandro Dalcin ierr = MPI_Type_contiguous(1,datatype,newtype); if (ierr) return ierr; 615cf5d571SLisandro Dalcin ierr = MPI_Type_commit(newtype); if (ierr) return ierr; 625cf5d571SLisandro Dalcin return MPI_SUCCESS; 6395fce210SBarry Smith } 6495fce210SBarry Smith #endif 6595fce210SBarry Smith 6695fce210SBarry Smith /* 6795fce210SBarry Smith * MPI_Reduce_local is not really useful because it can't handle sparse data and it vectorizes "in the wrong direction", 6895fce210SBarry Smith * therefore we pack data types manually. This section defines packing routines for the standard data types. 6995fce210SBarry Smith */ 7095fce210SBarry Smith 7195fce210SBarry Smith #define CPPJoin2_exp(a,b) a ## b 7295fce210SBarry Smith #define CPPJoin2(a,b) CPPJoin2_exp(a,b) 7395fce210SBarry Smith #define CPPJoin3_exp_(a,b,c) a ## b ## _ ## c 7495fce210SBarry Smith #define CPPJoin3_(a,b,c) CPPJoin3_exp_(a,b,c) 7595fce210SBarry Smith 7695fce210SBarry Smith /* Basic types without addition */ 772a74e5f4SJed Brown #define DEF_PackNoInit(type,BS) \ 782a74e5f4SJed Brown static void CPPJoin3_(Pack_,type,BS)(PetscInt n,PetscInt bs,const PetscInt *idx,const void *unpacked,void *packed) { \ 7995fce210SBarry Smith const type *u = (const type*)unpacked; \ 8095fce210SBarry Smith type *p = (type*)packed; \ 812a74e5f4SJed Brown PetscInt i,j,k; \ 822a74e5f4SJed Brown for (i=0; i<n; i++) \ 832a74e5f4SJed Brown for (j=0; j<bs; j+=BS) \ 842a74e5f4SJed Brown for (k=j; k<j+BS; k++) \ 852a74e5f4SJed Brown p[i*bs+k] = u[idx[i]*bs+k]; \ 8695fce210SBarry Smith } \ 872a74e5f4SJed Brown static void CPPJoin3_(UnpackInsert_,type,BS)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,const void *packed) { \ 8895fce210SBarry Smith type *u = (type*)unpacked; \ 8995fce210SBarry Smith const type *p = (const type*)packed; \ 902a74e5f4SJed Brown PetscInt i,j,k; \ 912a74e5f4SJed Brown for (i=0; i<n; i++) \ 922a74e5f4SJed Brown for (j=0; j<bs; j+=BS) \ 932a74e5f4SJed Brown for (k=j; k<j+BS; k++) \ 942a74e5f4SJed Brown u[idx[i]*bs+k] = p[i*bs+k]; \ 9595fce210SBarry Smith } \ 962a74e5f4SJed Brown static void CPPJoin3_(FetchAndInsert_,type,BS)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,void *packed) { \ 9795fce210SBarry Smith type *u = (type*)unpacked; \ 9895fce210SBarry Smith type *p = (type*)packed; \ 992a74e5f4SJed Brown PetscInt i,j,k; \ 10095fce210SBarry Smith for (i=0; i<n; i++) { \ 1012a74e5f4SJed Brown PetscInt ii = idx[i]; \ 1022a74e5f4SJed Brown for (j=0; j<bs; j+=BS) \ 1032a74e5f4SJed Brown for (k=j; k<j+BS; k++) { \ 1042a74e5f4SJed Brown type t = u[ii*bs+k]; \ 1052a74e5f4SJed Brown u[ii*bs+k] = p[i*bs+k]; \ 1062a74e5f4SJed Brown p[i*bs+k] = t; \ 1072a74e5f4SJed Brown } \ 10895fce210SBarry Smith } \ 10995fce210SBarry Smith } 11095fce210SBarry Smith 11195fce210SBarry Smith /* Basic types defining addition */ 1122a74e5f4SJed Brown #define DEF_PackAddNoInit(type,BS) \ 1132a74e5f4SJed Brown DEF_PackNoInit(type,BS) \ 1142a74e5f4SJed Brown static void CPPJoin3_(UnpackAdd_,type,BS)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,const void *packed) { \ 11595fce210SBarry Smith type *u = (type*)unpacked; \ 11695fce210SBarry Smith const type *p = (const type*)packed; \ 1172a74e5f4SJed Brown PetscInt i,j,k; \ 1182a74e5f4SJed Brown for (i=0; i<n; i++) \ 1192a74e5f4SJed Brown for (j=0; j<bs; j+=BS) \ 1202a74e5f4SJed Brown for (k=j; k<j+BS; k++) \ 1212a74e5f4SJed Brown u[idx[i]*bs+k] += p[i*bs+k]; \ 12295fce210SBarry Smith } \ 1232a74e5f4SJed Brown static void CPPJoin3_(FetchAndAdd_,type,BS)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,void *packed) { \ 12495fce210SBarry Smith type *u = (type*)unpacked; \ 12595fce210SBarry Smith type *p = (type*)packed; \ 1262a74e5f4SJed Brown PetscInt i,j,k; \ 12795fce210SBarry Smith for (i=0; i<n; i++) { \ 1282a74e5f4SJed Brown PetscInt ii = idx[i]; \ 1292a74e5f4SJed Brown for (j=0; j<bs; j+=BS) \ 1302a74e5f4SJed Brown for (k=j; k<j+BS; k++) { \ 1312a74e5f4SJed Brown type t = u[ii*bs+k]; \ 1322a74e5f4SJed Brown u[ii*bs+k] = t + p[i*bs+k]; \ 1332a74e5f4SJed Brown p[i*bs+k] = t; \ 13495fce210SBarry Smith } \ 13553deab39SPeter Brune } \ 1362a74e5f4SJed Brown } \ 1372a74e5f4SJed Brown static void CPPJoin3_(UnpackMult_,type,BS)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,const void *packed) { \ 13853deab39SPeter Brune type *u = (type*)unpacked; \ 13953deab39SPeter Brune const type *p = (const type*)packed; \ 1402a74e5f4SJed Brown PetscInt i,j,k; \ 1412a74e5f4SJed Brown for (i=0; i<n; i++) \ 1422a74e5f4SJed Brown for (j=0; j<bs; j+=BS) \ 1432a74e5f4SJed Brown for (k=j; k<j+BS; k++) \ 1442a74e5f4SJed Brown u[idx[i]*bs+k] *= p[i*bs+k]; \ 14553deab39SPeter Brune } \ 1462a74e5f4SJed Brown static void CPPJoin3_(FetchAndMult_,type,BS)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,void *packed) { \ 14753deab39SPeter Brune type *u = (type*)unpacked; \ 14853deab39SPeter Brune type *p = (type*)packed; \ 1492a74e5f4SJed Brown PetscInt i,j,k; \ 15053deab39SPeter Brune for (i=0; i<n; i++) { \ 1512a74e5f4SJed Brown PetscInt ii = idx[i]; \ 1522a74e5f4SJed Brown for (j=0; j<bs; j+=BS) \ 1532a74e5f4SJed Brown for (k=j; k<j+BS; k++) { \ 1542a74e5f4SJed Brown type t = u[ii*bs+k]; \ 1552a74e5f4SJed Brown u[ii*bs+k] = t * p[i*bs+k]; \ 1562a74e5f4SJed Brown p[i*bs+k] = t; \ 1572a74e5f4SJed Brown } \ 15853deab39SPeter Brune } \ 15995fce210SBarry Smith } 1602a74e5f4SJed Brown #define DEF_Pack(type,BS) \ 1612a74e5f4SJed Brown DEF_PackAddNoInit(type,BS) \ 1622a74e5f4SJed Brown static void CPPJoin3_(PackInit_,type,BS)(PetscSFBasicPack link) { \ 1632a74e5f4SJed Brown link->Pack = CPPJoin3_(Pack_,type,BS); \ 1642a74e5f4SJed Brown link->UnpackInsert = CPPJoin3_(UnpackInsert_,type,BS); \ 1652a74e5f4SJed Brown link->UnpackAdd = CPPJoin3_(UnpackAdd_,type,BS); \ 1662a74e5f4SJed Brown link->UnpackMult = CPPJoin3_(UnpackMult_,type,BS); \ 1672a74e5f4SJed Brown link->FetchAndInsert = CPPJoin3_(FetchAndInsert_,type,BS); \ 1682a74e5f4SJed Brown link->FetchAndAdd = CPPJoin3_(FetchAndAdd_,type,BS); \ 1692a74e5f4SJed Brown link->FetchAndMult = CPPJoin3_(FetchAndMult_,type,BS); \ 17095fce210SBarry Smith link->unitbytes = sizeof(type); \ 17195fce210SBarry Smith } 17295fce210SBarry Smith /* Comparable types */ 17395fce210SBarry Smith #define DEF_PackCmp(type) \ 1742a74e5f4SJed Brown DEF_PackAddNoInit(type,1) \ 1752a74e5f4SJed Brown static void CPPJoin2(UnpackMax_,type)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,const void *packed) { \ 17695fce210SBarry Smith type *u = (type*)unpacked; \ 17795fce210SBarry Smith const type *p = (const type*)packed; \ 17895fce210SBarry Smith PetscInt i; \ 17995fce210SBarry Smith for (i=0; i<n; i++) { \ 18095fce210SBarry Smith type v = u[idx[i]]; \ 18195fce210SBarry Smith u[idx[i]] = PetscMax(v,p[i]); \ 18295fce210SBarry Smith } \ 18395fce210SBarry Smith } \ 1842a74e5f4SJed Brown static void CPPJoin2(UnpackMin_,type)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,const void *packed) { \ 18595fce210SBarry Smith type *u = (type*)unpacked; \ 18695fce210SBarry Smith const type *p = (const type*)packed; \ 18795fce210SBarry Smith PetscInt i; \ 18895fce210SBarry Smith for (i=0; i<n; i++) { \ 18995fce210SBarry Smith type v = u[idx[i]]; \ 19095fce210SBarry Smith u[idx[i]] = PetscMin(v,p[i]); \ 19195fce210SBarry Smith } \ 19295fce210SBarry Smith } \ 1932a74e5f4SJed Brown static void CPPJoin2(FetchAndMax_,type)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,void *packed) { \ 19495fce210SBarry Smith type *u = (type*)unpacked; \ 19595fce210SBarry Smith type *p = (type*)packed; \ 19695fce210SBarry Smith PetscInt i; \ 19795fce210SBarry Smith for (i=0; i<n; i++) { \ 19895fce210SBarry Smith PetscInt j = idx[i]; \ 19995fce210SBarry Smith type v = u[j]; \ 20095fce210SBarry Smith u[j] = PetscMax(v,p[i]); \ 20195fce210SBarry Smith p[i] = v; \ 20295fce210SBarry Smith } \ 20395fce210SBarry Smith } \ 2042a74e5f4SJed Brown static void CPPJoin2(FetchAndMin_,type)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,void *packed) { \ 20595fce210SBarry Smith type *u = (type*)unpacked; \ 20695fce210SBarry Smith type *p = (type*)packed; \ 20795fce210SBarry Smith PetscInt i; \ 20895fce210SBarry Smith for (i=0; i<n; i++) { \ 20995fce210SBarry Smith PetscInt j = idx[i]; \ 21095fce210SBarry Smith type v = u[j]; \ 21195fce210SBarry Smith u[j] = PetscMin(v,p[i]); \ 21295fce210SBarry Smith p[i] = v; \ 21395fce210SBarry Smith } \ 21495fce210SBarry Smith } \ 21595fce210SBarry Smith static void CPPJoin2(PackInit_,type)(PetscSFBasicPack link) { \ 2162a74e5f4SJed Brown link->Pack = CPPJoin3_(Pack_,type,1); \ 2172a74e5f4SJed Brown link->UnpackInsert = CPPJoin3_(UnpackInsert_,type,1); \ 2182a74e5f4SJed Brown link->UnpackAdd = CPPJoin3_(UnpackAdd_,type,1); \ 21995fce210SBarry Smith link->UnpackMax = CPPJoin2(UnpackMax_,type); \ 22095fce210SBarry Smith link->UnpackMin = CPPJoin2(UnpackMin_,type); \ 2212a74e5f4SJed Brown link->UnpackMult = CPPJoin3_(UnpackMult_,type,1); \ 2222a74e5f4SJed Brown link->FetchAndInsert = CPPJoin3_(FetchAndInsert_,type,1); \ 2232a74e5f4SJed Brown link->FetchAndAdd = CPPJoin3_(FetchAndAdd_ ,type,1); \ 22495fce210SBarry Smith link->FetchAndMax = CPPJoin2(FetchAndMax_ ,type); \ 22595fce210SBarry Smith link->FetchAndMin = CPPJoin2(FetchAndMin_ ,type); \ 2262a74e5f4SJed Brown link->FetchAndMult = CPPJoin3_(FetchAndMult_,type,1); \ 22795fce210SBarry Smith link->unitbytes = sizeof(type); \ 22895fce210SBarry Smith } 22995fce210SBarry Smith 23053deab39SPeter Brune /* Logical Types */ 23153deab39SPeter Brune #define DEF_PackLog(type) \ 2322a74e5f4SJed Brown static void CPPJoin2(UnpackLAND_,type)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,const void *packed) { \ 23353deab39SPeter Brune type *u = (type*)unpacked; \ 23453deab39SPeter Brune const type *p = (const type*)packed; \ 23553deab39SPeter Brune PetscInt i; \ 23653deab39SPeter Brune for (i=0; i<n; i++) { \ 23753deab39SPeter Brune type v = u[idx[i]]; \ 23853deab39SPeter Brune u[idx[i]] = v && p[i]; \ 23953deab39SPeter Brune } \ 24053deab39SPeter Brune } \ 2412a74e5f4SJed Brown static void CPPJoin2(UnpackLOR_,type)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,const void *packed) { \ 24253deab39SPeter Brune type *u = (type*)unpacked; \ 24353deab39SPeter Brune const type *p = (const type*)packed; \ 24453deab39SPeter Brune PetscInt i; \ 24553deab39SPeter Brune for (i=0; i<n; i++) { \ 24653deab39SPeter Brune type v = u[idx[i]]; \ 24753deab39SPeter Brune u[idx[i]] = v || p[i]; \ 24853deab39SPeter Brune } \ 24953deab39SPeter Brune } \ 2502a74e5f4SJed Brown static void CPPJoin2(UnpackLXOR_,type)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,const void *packed) { \ 25153deab39SPeter Brune type *u = (type*)unpacked; \ 25253deab39SPeter Brune const type *p = (const type*)packed; \ 25353deab39SPeter Brune PetscInt i; \ 25453deab39SPeter Brune for (i=0; i<n; i++) { \ 25553deab39SPeter Brune type v = u[idx[i]]; \ 25653deab39SPeter Brune u[idx[i]] = (!v)!=(!p[i]); \ 25753deab39SPeter Brune } \ 25853deab39SPeter Brune } \ 2592a74e5f4SJed Brown static void CPPJoin2(FetchAndLAND_,type)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,void *packed) { \ 26053deab39SPeter Brune type *u = (type*)unpacked; \ 26153deab39SPeter Brune type *p = (type*)packed; \ 26253deab39SPeter Brune PetscInt i; \ 26353deab39SPeter Brune for (i=0; i<n; i++) { \ 26453deab39SPeter Brune PetscInt j = idx[i]; \ 26553deab39SPeter Brune type v = u[j]; \ 26653deab39SPeter Brune u[j] = v && p[i]; \ 26753deab39SPeter Brune p[i] = v; \ 26853deab39SPeter Brune } \ 26953deab39SPeter Brune } \ 2702a74e5f4SJed Brown static void CPPJoin2(FetchAndLOR_,type)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,void *packed) { \ 27153deab39SPeter Brune type *u = (type*)unpacked; \ 27253deab39SPeter Brune type *p = (type*)packed; \ 27353deab39SPeter Brune PetscInt i; \ 27453deab39SPeter Brune for (i=0; i<n; i++) { \ 27553deab39SPeter Brune PetscInt j = idx[i]; \ 27653deab39SPeter Brune type v = u[j]; \ 27753deab39SPeter Brune u[j] = v || p[i]; \ 27853deab39SPeter Brune p[i] = v; \ 27953deab39SPeter Brune } \ 28053deab39SPeter Brune } \ 2812a74e5f4SJed Brown static void CPPJoin2(FetchAndLXOR_,type)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,void *packed) { \ 28253deab39SPeter Brune type *u = (type*)unpacked; \ 28353deab39SPeter Brune type *p = (type*)packed; \ 28453deab39SPeter Brune PetscInt i; \ 28553deab39SPeter Brune for (i=0; i<n; i++) { \ 28653deab39SPeter Brune PetscInt j = idx[i]; \ 28753deab39SPeter Brune type v = u[j]; \ 28853deab39SPeter Brune u[j] = (!v)!=(!p[i]); \ 28953deab39SPeter Brune p[i] = v; \ 29053deab39SPeter Brune } \ 29153deab39SPeter Brune } \ 29253deab39SPeter Brune static void CPPJoin2(PackInit_Logical_,type)(PetscSFBasicPack link) { \ 29353deab39SPeter Brune link->UnpackLAND = CPPJoin2(UnpackLAND_,type); \ 29453deab39SPeter Brune link->UnpackLOR = CPPJoin2(UnpackLOR_,type); \ 29553deab39SPeter Brune link->UnpackLXOR = CPPJoin2(UnpackLXOR_,type); \ 29653deab39SPeter Brune link->FetchAndLAND = CPPJoin2(FetchAndLAND_,type); \ 29753deab39SPeter Brune link->FetchAndLOR = CPPJoin2(FetchAndLOR_,type); \ 29853deab39SPeter Brune link->FetchAndLXOR = CPPJoin2(FetchAndLXOR_,type); \ 29953deab39SPeter Brune } 30053deab39SPeter Brune 30153deab39SPeter Brune 30253deab39SPeter Brune /* Bitwise Types */ 30353deab39SPeter Brune #define DEF_PackBit(type) \ 3042a74e5f4SJed Brown static void CPPJoin2(UnpackBAND_,type)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,const void *packed) { \ 30553deab39SPeter Brune type *u = (type*)unpacked; \ 30653deab39SPeter Brune const type *p = (const type*)packed; \ 30753deab39SPeter Brune PetscInt i; \ 30853deab39SPeter Brune for (i=0; i<n; i++) { \ 30953deab39SPeter Brune type v = u[idx[i]]; \ 31053deab39SPeter Brune u[idx[i]] = v & p[i]; \ 31153deab39SPeter Brune } \ 31253deab39SPeter Brune } \ 3132a74e5f4SJed Brown static void CPPJoin2(UnpackBOR_,type)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,const void *packed) { \ 31453deab39SPeter Brune type *u = (type*)unpacked; \ 31553deab39SPeter Brune const type *p = (const type*)packed; \ 31653deab39SPeter Brune PetscInt i; \ 31753deab39SPeter Brune for (i=0; i<n; i++) { \ 31853deab39SPeter Brune type v = u[idx[i]]; \ 31953deab39SPeter Brune u[idx[i]] = v | p[i]; \ 32053deab39SPeter Brune } \ 32153deab39SPeter Brune } \ 3222a74e5f4SJed Brown static void CPPJoin2(UnpackBXOR_,type)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,const void *packed) { \ 32353deab39SPeter Brune type *u = (type*)unpacked; \ 32453deab39SPeter Brune const type *p = (const type*)packed; \ 32553deab39SPeter Brune PetscInt i; \ 32653deab39SPeter Brune for (i=0; i<n; i++) { \ 32753deab39SPeter Brune type v = u[idx[i]]; \ 32853deab39SPeter Brune u[idx[i]] = v^p[i]; \ 32953deab39SPeter Brune } \ 33053deab39SPeter Brune } \ 3312a74e5f4SJed Brown static void CPPJoin2(FetchAndBAND_,type)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,void *packed) { \ 33253deab39SPeter Brune type *u = (type*)unpacked; \ 33353deab39SPeter Brune type *p = (type*)packed; \ 33453deab39SPeter Brune PetscInt i; \ 33553deab39SPeter Brune for (i=0; i<n; i++) { \ 33653deab39SPeter Brune PetscInt j = idx[i]; \ 33753deab39SPeter Brune type v = u[j]; \ 33853deab39SPeter Brune u[j] = v & p[i]; \ 33953deab39SPeter Brune p[i] = v; \ 34053deab39SPeter Brune } \ 34153deab39SPeter Brune } \ 3422a74e5f4SJed Brown static void CPPJoin2(FetchAndBOR_,type)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,void *packed) { \ 34353deab39SPeter Brune type *u = (type*)unpacked; \ 34453deab39SPeter Brune type *p = (type*)packed; \ 34553deab39SPeter Brune PetscInt i; \ 34653deab39SPeter Brune for (i=0; i<n; i++) { \ 34753deab39SPeter Brune PetscInt j = idx[i]; \ 34853deab39SPeter Brune type v = u[j]; \ 34953deab39SPeter Brune u[j] = v | p[i]; \ 35053deab39SPeter Brune p[i] = v; \ 35153deab39SPeter Brune } \ 35253deab39SPeter Brune } \ 3532a74e5f4SJed Brown static void CPPJoin2(FetchAndBXOR_,type)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,void *packed) { \ 35453deab39SPeter Brune type *u = (type*)unpacked; \ 35553deab39SPeter Brune type *p = (type*)packed; \ 35653deab39SPeter Brune PetscInt i; \ 35753deab39SPeter Brune for (i=0; i<n; i++) { \ 35853deab39SPeter Brune PetscInt j = idx[i]; \ 35953deab39SPeter Brune type v = u[j]; \ 36053deab39SPeter Brune u[j] = v^p[i]; \ 36153deab39SPeter Brune p[i] = v; \ 36253deab39SPeter Brune } \ 36353deab39SPeter Brune } \ 36453deab39SPeter Brune static void CPPJoin2(PackInit_Bitwise_,type)(PetscSFBasicPack link) { \ 36553deab39SPeter Brune link->UnpackBAND = CPPJoin2(UnpackBAND_,type); \ 36653deab39SPeter Brune link->UnpackBOR = CPPJoin2(UnpackBOR_,type); \ 36753deab39SPeter Brune link->UnpackBXOR = CPPJoin2(UnpackBXOR_,type); \ 36853deab39SPeter Brune link->FetchAndBAND = CPPJoin2(FetchAndBAND_,type); \ 36953deab39SPeter Brune link->FetchAndBOR = CPPJoin2(FetchAndBOR_,type); \ 37053deab39SPeter Brune link->FetchAndBXOR = CPPJoin2(FetchAndBXOR_,type); \ 37153deab39SPeter Brune } 37253deab39SPeter Brune 37395fce210SBarry Smith /* Pair types */ 37495fce210SBarry Smith #define CPPJoinloc_exp(base,op,t1,t2) base ## op ## loc_ ## t1 ## _ ## t2 37595fce210SBarry Smith #define CPPJoinloc(base,op,t1,t2) CPPJoinloc_exp(base,op,t1,t2) 37695fce210SBarry Smith #define PairType(type1,type2) CPPJoin3_(_pairtype_,type1,type2) 37795fce210SBarry Smith #define DEF_UnpackXloc(type1,type2,locname,op) \ 3782a74e5f4SJed Brown static void CPPJoinloc(Unpack,locname,type1,type2)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,const void *packed) { \ 37995fce210SBarry Smith PairType(type1,type2) *u = (PairType(type1,type2)*)unpacked; \ 38095fce210SBarry Smith const PairType(type1,type2) *p = (const PairType(type1,type2)*)packed; \ 38195fce210SBarry Smith PetscInt i; \ 38295fce210SBarry Smith for (i=0; i<n; i++) { \ 38395fce210SBarry Smith PetscInt j = idx[i]; \ 38495fce210SBarry Smith if (p[i].a op u[j].a) { \ 38595fce210SBarry Smith u[j].a = p[i].a; \ 38695fce210SBarry Smith u[j].b = p[i].b; \ 38795fce210SBarry Smith } else if (u[j].a == p[i].a) { \ 38895fce210SBarry Smith u[j].b = PetscMin(u[j].b,p[i].b); \ 38995fce210SBarry Smith } \ 39095fce210SBarry Smith } \ 39195fce210SBarry Smith } \ 3922a74e5f4SJed Brown static void CPPJoinloc(FetchAnd,locname,type1,type2)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,void *packed) { \ 39395fce210SBarry Smith PairType(type1,type2) *u = (PairType(type1,type2)*)unpacked; \ 39495fce210SBarry Smith PairType(type1,type2) *p = (PairType(type1,type2)*)packed; \ 39595fce210SBarry Smith PetscInt i; \ 39695fce210SBarry Smith for (i=0; i<n; i++) { \ 39795fce210SBarry Smith PetscInt j = idx[i]; \ 39895fce210SBarry Smith PairType(type1,type2) v; \ 39995fce210SBarry Smith v.a = u[j].a; \ 40095fce210SBarry Smith v.b = u[j].b; \ 40195fce210SBarry Smith if (p[i].a op u[j].a) { \ 40295fce210SBarry Smith u[j].a = p[i].a; \ 40395fce210SBarry Smith u[j].b = p[i].b; \ 40495fce210SBarry Smith } else if (u[j].a == p[i].a) { \ 40595fce210SBarry Smith u[j].b = PetscMin(u[j].b,p[i].b); \ 40695fce210SBarry Smith } \ 40795fce210SBarry Smith p[i].a = v.a; \ 40895fce210SBarry Smith p[i].b = v.b; \ 40995fce210SBarry Smith } \ 41095fce210SBarry Smith } 41195fce210SBarry Smith #define DEF_PackPair(type1,type2) \ 41295fce210SBarry Smith typedef struct {type1 a; type2 b;} PairType(type1,type2); \ 4132a74e5f4SJed Brown static void CPPJoin3_(Pack_,type1,type2)(PetscInt n,PetscInt bs,const PetscInt *idx,const void *unpacked,void *packed) { \ 41495fce210SBarry Smith const PairType(type1,type2) *u = (const PairType(type1,type2)*)unpacked; \ 41595fce210SBarry Smith PairType(type1,type2) *p = (PairType(type1,type2)*)packed; \ 41695fce210SBarry Smith PetscInt i; \ 41795fce210SBarry Smith for (i=0; i<n; i++) { \ 41895fce210SBarry Smith p[i].a = u[idx[i]].a; \ 41995fce210SBarry Smith p[i].b = u[idx[i]].b; \ 42095fce210SBarry Smith } \ 42195fce210SBarry Smith } \ 4222a74e5f4SJed Brown static void CPPJoin3_(UnpackInsert_,type1,type2)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,const void *packed) { \ 42395fce210SBarry Smith PairType(type1,type2) *u = (PairType(type1,type2)*)unpacked; \ 42495fce210SBarry Smith const PairType(type1,type2) *p = (const PairType(type1,type2)*)packed; \ 42595fce210SBarry Smith PetscInt i; \ 42695fce210SBarry Smith for (i=0; i<n; i++) { \ 42795fce210SBarry Smith u[idx[i]].a = p[i].a; \ 42895fce210SBarry Smith u[idx[i]].b = p[i].b; \ 42995fce210SBarry Smith } \ 43095fce210SBarry Smith } \ 4312a74e5f4SJed Brown static void CPPJoin3_(UnpackAdd_,type1,type2)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,const void *packed) { \ 43295fce210SBarry Smith PairType(type1,type2) *u = (PairType(type1,type2)*)unpacked; \ 43395fce210SBarry Smith const PairType(type1,type2) *p = (const PairType(type1,type2)*)packed; \ 43495fce210SBarry Smith PetscInt i; \ 43595fce210SBarry Smith for (i=0; i<n; i++) { \ 43695fce210SBarry Smith u[idx[i]].a += p[i].a; \ 43795fce210SBarry Smith u[idx[i]].b += p[i].b; \ 43895fce210SBarry Smith } \ 43995fce210SBarry Smith } \ 4402a74e5f4SJed Brown static void CPPJoin3_(FetchAndInsert_,type1,type2)(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,void *packed) { \ 44195fce210SBarry Smith PairType(type1,type2) *u = (PairType(type1,type2)*)unpacked; \ 44295fce210SBarry Smith PairType(type1,type2) *p = (PairType(type1,type2)*)packed; \ 44395fce210SBarry Smith PetscInt i; \ 44495fce210SBarry Smith for (i=0; i<n; i++) { \ 44595fce210SBarry Smith PetscInt j = idx[i]; \ 44695fce210SBarry Smith PairType(type1,type2) v; \ 44795fce210SBarry Smith v.a = u[j].a; \ 44895fce210SBarry Smith v.b = u[j].b; \ 44995fce210SBarry Smith u[j].a = p[i].a; \ 45095fce210SBarry Smith u[j].b = p[i].b; \ 45195fce210SBarry Smith p[i].a = v.a; \ 45295fce210SBarry Smith p[i].b = v.b; \ 45395fce210SBarry Smith } \ 45495fce210SBarry Smith } \ 4552a74e5f4SJed Brown static void FetchAndAdd_ ## type1 ## _ ## type2(PetscInt n,PetscInt bs,const PetscInt *idx,void *unpacked,void *packed) { \ 45695fce210SBarry Smith PairType(type1,type2) *u = (PairType(type1,type2)*)unpacked; \ 45795fce210SBarry Smith PairType(type1,type2) *p = (PairType(type1,type2)*)packed; \ 45895fce210SBarry Smith PetscInt i; \ 45995fce210SBarry Smith for (i=0; i<n; i++) { \ 46095fce210SBarry Smith PetscInt j = idx[i]; \ 46195fce210SBarry Smith PairType(type1,type2) v; \ 46295fce210SBarry Smith v.a = u[j].a; \ 46395fce210SBarry Smith v.b = u[j].b; \ 46495fce210SBarry Smith u[j].a = v.a + p[i].a; \ 46595fce210SBarry Smith u[j].b = v.b + p[i].b; \ 46695fce210SBarry Smith p[i].a = v.a; \ 46795fce210SBarry Smith p[i].b = v.b; \ 46895fce210SBarry Smith } \ 46995fce210SBarry Smith } \ 47095fce210SBarry Smith DEF_UnpackXloc(type1,type2,Max,>) \ 47195fce210SBarry Smith DEF_UnpackXloc(type1,type2,Min,<) \ 47295fce210SBarry Smith static void CPPJoin3_(PackInit_,type1,type2)(PetscSFBasicPack link) { \ 47395fce210SBarry Smith link->Pack = CPPJoin3_(Pack_,type1,type2); \ 47495fce210SBarry Smith link->UnpackInsert = CPPJoin3_(UnpackInsert_,type1,type2); \ 47595fce210SBarry Smith link->UnpackAdd = CPPJoin3_(UnpackAdd_,type1,type2); \ 47695fce210SBarry Smith link->UnpackMaxloc = CPPJoin3_(UnpackMaxloc_,type1,type2); \ 47795fce210SBarry Smith link->UnpackMinloc = CPPJoin3_(UnpackMinloc_,type1,type2); \ 47895fce210SBarry Smith link->FetchAndInsert = CPPJoin3_(FetchAndInsert_,type1,type2); \ 47995fce210SBarry Smith link->FetchAndAdd = CPPJoin3_(FetchAndAdd_,type1,type2); \ 48095fce210SBarry Smith link->FetchAndMaxloc = CPPJoin3_(FetchAndMaxloc_,type1,type2); \ 48195fce210SBarry Smith link->FetchAndMinloc = CPPJoin3_(FetchAndMinloc_,type1,type2); \ 48295fce210SBarry Smith link->unitbytes = sizeof(PairType(type1,type2)); \ 48395fce210SBarry Smith } 48495fce210SBarry Smith 48595fce210SBarry Smith /* Currently only dumb blocks of data */ 48695fce210SBarry Smith #define BlockType(unit,count) CPPJoin3_(_blocktype_,unit,count) 48795fce210SBarry Smith #define DEF_Block(unit,count) \ 48895fce210SBarry Smith typedef struct {unit v[count];} BlockType(unit,count); \ 4892a74e5f4SJed Brown DEF_PackNoInit(BlockType(unit,count),1) \ 49095fce210SBarry Smith static void CPPJoin3_(PackInit_block_,unit,count)(PetscSFBasicPack link) { \ 4912a74e5f4SJed Brown link->Pack = CPPJoin3_(Pack_,BlockType(unit,count),1); \ 4922a74e5f4SJed Brown link->UnpackInsert = CPPJoin3_(UnpackInsert_,BlockType(unit,count),1); \ 4932a74e5f4SJed Brown link->FetchAndInsert = CPPJoin3_(FetchAndInsert_,BlockType(unit,count),1); \ 49495fce210SBarry Smith link->unitbytes = sizeof(BlockType(unit,count)); \ 49595fce210SBarry Smith } 49695fce210SBarry Smith 49795fce210SBarry Smith DEF_PackCmp(int) 49853deab39SPeter Brune DEF_PackBit(int) 49953deab39SPeter Brune DEF_PackLog(int) 50095fce210SBarry Smith DEF_PackCmp(PetscInt) 50153deab39SPeter Brune DEF_PackBit(PetscInt) 50253deab39SPeter Brune DEF_PackLog(PetscInt) 5032a74e5f4SJed Brown DEF_Pack(PetscInt,2) 5042a74e5f4SJed Brown DEF_Pack(PetscInt,3) 5052a74e5f4SJed Brown DEF_Pack(PetscInt,4) 5062a74e5f4SJed Brown DEF_Pack(PetscInt,5) 5072a74e5f4SJed Brown DEF_Pack(PetscInt,7) 50895fce210SBarry Smith DEF_PackCmp(PetscReal) 50953deab39SPeter Brune DEF_PackLog(PetscReal) 5102a74e5f4SJed Brown DEF_Pack(PetscReal,2) 5112a74e5f4SJed Brown DEF_Pack(PetscReal,3) 5122a74e5f4SJed Brown DEF_Pack(PetscReal,4) 5132a74e5f4SJed Brown DEF_Pack(PetscReal,5) 5142a74e5f4SJed Brown DEF_Pack(PetscReal,7) 51595fce210SBarry Smith #if defined(PETSC_HAVE_COMPLEX) 5162a74e5f4SJed Brown DEF_Pack(PetscComplex,1) 5172a74e5f4SJed Brown DEF_Pack(PetscComplex,2) 5182a74e5f4SJed Brown DEF_Pack(PetscComplex,3) 5192a74e5f4SJed Brown DEF_Pack(PetscComplex,4) 5202a74e5f4SJed Brown DEF_Pack(PetscComplex,5) 5212a74e5f4SJed Brown DEF_Pack(PetscComplex,7) 52295fce210SBarry Smith #endif 52395fce210SBarry Smith DEF_PackPair(int,int) 52495fce210SBarry Smith DEF_PackPair(PetscInt,PetscInt) 52595fce210SBarry Smith DEF_Block(int,1) 52695fce210SBarry Smith DEF_Block(int,2) 52795fce210SBarry Smith DEF_Block(int,3) 52895fce210SBarry Smith DEF_Block(int,4) 52995fce210SBarry Smith DEF_Block(int,5) 53095fce210SBarry Smith DEF_Block(int,6) 53195fce210SBarry Smith DEF_Block(int,7) 53295fce210SBarry Smith DEF_Block(int,8) 53395fce210SBarry Smith 53495fce210SBarry Smith static PetscErrorCode PetscSFSetUp_Basic(PetscSF sf) 53595fce210SBarry Smith { 53695fce210SBarry Smith PetscSF_Basic *bas = (PetscSF_Basic*)sf->data; 53795fce210SBarry Smith PetscErrorCode ierr; 53895fce210SBarry Smith PetscInt *rlengths,*ilengths,i; 539c943f53fSJed Brown PetscMPIInt rank,niranks,*iranks; 54095fce210SBarry Smith MPI_Comm comm; 541b5a8e515SJed Brown MPI_Group group; 54295fce210SBarry Smith MPI_Request *rootreqs,*leafreqs; 54395fce210SBarry Smith 54495fce210SBarry Smith PetscFunctionBegin; 545b5a8e515SJed Brown ierr = MPI_Comm_group(PETSC_COMM_SELF,&group);CHKERRQ(ierr); 546b5a8e515SJed Brown ierr = PetscSFSetUpRanks(sf,group);CHKERRQ(ierr); 547b5a8e515SJed Brown ierr = MPI_Group_free(&group);CHKERRQ(ierr); 54895fce210SBarry Smith ierr = PetscObjectGetComm((PetscObject)sf,&comm);CHKERRQ(ierr); 54995fce210SBarry Smith ierr = PetscObjectGetNewTag((PetscObject)sf,&bas->tag);CHKERRQ(ierr); 550c943f53fSJed Brown ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 55195fce210SBarry Smith /* 55295fce210SBarry Smith * Inform roots about how many leaves and from which ranks 55395fce210SBarry Smith */ 554785e854fSJed Brown ierr = PetscMalloc1(sf->nranks,&rlengths);CHKERRQ(ierr); 55595fce210SBarry Smith /* Determine number, sending ranks, and length of incoming */ 55695fce210SBarry Smith for (i=0; i<sf->nranks; i++) { 55795fce210SBarry Smith rlengths[i] = sf->roffset[i+1] - sf->roffset[i]; /* Number of roots referenced by my leaves; for rank sf->ranks[i] */ 55895fce210SBarry Smith } 559c943f53fSJed Brown ierr = PetscCommBuildTwoSided(comm,1,MPIU_INT,sf->nranks-sf->ndranks,sf->ranks+sf->ndranks,rlengths+sf->ndranks,&niranks,&iranks,(void**)&ilengths);CHKERRQ(ierr); 560c943f53fSJed Brown 561*0b899082SJunchao Zhang /* Sort iranks. See use of VecScatterGetRemoteOrdered_Private() in MatGetBrowsOfAoCols_MPIAIJ() on why. 562*0b899082SJunchao Zhang We could sort ranks there at the price of allocating extra working arrays. Presumably, niranks is 563*0b899082SJunchao Zhang small and the sorting is cheap. 564*0b899082SJunchao Zhang */ 565*0b899082SJunchao Zhang ierr = PetscSortMPIIntWithIntArray(niranks,iranks,ilengths);CHKERRQ(ierr); 566*0b899082SJunchao Zhang 567c943f53fSJed Brown /* Partition into distinguished and non-distinguished incoming ranks */ 568c943f53fSJed Brown bas->ndiranks = sf->ndranks; 569c943f53fSJed Brown bas->niranks = bas->ndiranks + niranks; 570c943f53fSJed Brown ierr = PetscMalloc2(bas->niranks,&bas->iranks,bas->niranks+1,&bas->ioffset);CHKERRQ(ierr); 571c943f53fSJed Brown bas->ioffset[0] = 0; 572c943f53fSJed Brown for (i=0; i<bas->ndiranks; i++) { 573c943f53fSJed Brown bas->iranks[i] = sf->ranks[i]; 574c943f53fSJed Brown bas->ioffset[i+1] = bas->ioffset[i] + rlengths[i]; 575c943f53fSJed Brown } 576c943f53fSJed Brown if (bas->ndiranks > 1 || (bas->ndiranks == 1 && bas->iranks[0] != rank)) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Broken setup for shared ranks"); 577c943f53fSJed Brown for ( ; i<bas->niranks; i++) { 578c943f53fSJed Brown bas->iranks[i] = iranks[i-bas->ndiranks]; 579c943f53fSJed Brown bas->ioffset[i+1] = bas->ioffset[i] + ilengths[i-bas->ndiranks]; 580c943f53fSJed Brown } 581c943f53fSJed Brown bas->itotal = bas->ioffset[i]; 58295fce210SBarry Smith ierr = PetscFree(rlengths);CHKERRQ(ierr); 583c943f53fSJed Brown ierr = PetscFree(iranks);CHKERRQ(ierr); 584c943f53fSJed Brown ierr = PetscFree(ilengths);CHKERRQ(ierr); 58595fce210SBarry Smith 58695fce210SBarry Smith /* Send leaf identities to roots */ 587c943f53fSJed Brown ierr = PetscMalloc1(bas->itotal,&bas->irootloc);CHKERRQ(ierr); 588c943f53fSJed Brown ierr = PetscMalloc2(bas->niranks-bas->ndiranks,&rootreqs,sf->nranks-sf->ndranks,&leafreqs);CHKERRQ(ierr); 589c943f53fSJed Brown for (i=bas->ndiranks; i<bas->niranks; i++) { 590c943f53fSJed Brown ierr = MPI_Irecv(bas->irootloc+bas->ioffset[i],bas->ioffset[i+1]-bas->ioffset[i],MPIU_INT,bas->iranks[i],bas->tag,comm,&rootreqs[i-bas->ndiranks]);CHKERRQ(ierr); 59195fce210SBarry Smith } 59295fce210SBarry Smith for (i=0; i<sf->nranks; i++) { 59395fce210SBarry Smith PetscMPIInt npoints; 59495fce210SBarry Smith ierr = PetscMPIIntCast(sf->roffset[i+1] - sf->roffset[i],&npoints);CHKERRQ(ierr); 595c943f53fSJed Brown if (i < sf->ndranks) { 596c943f53fSJed Brown if (sf->ranks[i] != rank) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Cannot interpret distinguished leaf rank"); 597c943f53fSJed Brown if (bas->iranks[0] != rank) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Cannot interpret distinguished root rank"); 598c943f53fSJed Brown if (npoints != bas->ioffset[1]-bas->ioffset[0]) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Distinguished rank exchange has mismatched lengths"); 599c943f53fSJed Brown ierr = PetscMemcpy(bas->irootloc+bas->ioffset[0],sf->rremote+sf->roffset[i],npoints*sizeof(bas->irootloc[0]));CHKERRQ(ierr); 600c943f53fSJed Brown continue; 60195fce210SBarry Smith } 602c943f53fSJed Brown ierr = MPI_Isend(sf->rremote+sf->roffset[i],npoints,MPIU_INT,sf->ranks[i],bas->tag,comm,&leafreqs[i-sf->ndranks]);CHKERRQ(ierr); 603c943f53fSJed Brown } 604c943f53fSJed Brown ierr = MPI_Waitall(bas->niranks-bas->ndiranks,rootreqs,MPI_STATUSES_IGNORE);CHKERRQ(ierr); 605c943f53fSJed Brown ierr = MPI_Waitall(sf->nranks-sf->ndranks,leafreqs,MPI_STATUSES_IGNORE);CHKERRQ(ierr); 606eb9baa12SBarry Smith ierr = PetscFree2(rootreqs,leafreqs);CHKERRQ(ierr); 60795fce210SBarry Smith PetscFunctionReturn(0); 60895fce210SBarry Smith } 60995fce210SBarry Smith 61095fce210SBarry Smith static PetscErrorCode PetscSFBasicPackTypeSetup(PetscSFBasicPack link,MPI_Datatype unit) 61195fce210SBarry Smith { 61295fce210SBarry Smith PetscErrorCode ierr; 61395fce210SBarry Smith PetscBool isInt,isPetscInt,isPetscReal,is2Int,is2PetscInt; 614e37f7bbbSSatish Balay PetscInt nPetscIntContig,nPetscRealContig; 61595fce210SBarry Smith #if defined(PETSC_HAVE_COMPLEX) 61695fce210SBarry Smith PetscBool isPetscComplex; 617e37f7bbbSSatish Balay PetscInt nPetscComplexContig; 61895fce210SBarry Smith #endif 61995fce210SBarry Smith 62095fce210SBarry Smith PetscFunctionBegin; 62195fce210SBarry Smith ierr = MPIPetsc_Type_compare(unit,MPI_INT,&isInt);CHKERRQ(ierr); 62295fce210SBarry Smith ierr = MPIPetsc_Type_compare(unit,MPIU_INT,&isPetscInt);CHKERRQ(ierr); 6232a74e5f4SJed Brown ierr = MPIPetsc_Type_compare_contig(unit,MPIU_INT,&nPetscIntContig);CHKERRQ(ierr); 62495fce210SBarry Smith ierr = MPIPetsc_Type_compare(unit,MPIU_REAL,&isPetscReal);CHKERRQ(ierr); 6252a74e5f4SJed Brown ierr = MPIPetsc_Type_compare_contig(unit,MPIU_REAL,&nPetscRealContig);CHKERRQ(ierr); 62695fce210SBarry Smith #if defined(PETSC_HAVE_COMPLEX) 62795fce210SBarry Smith ierr = MPIPetsc_Type_compare(unit,MPIU_COMPLEX,&isPetscComplex);CHKERRQ(ierr); 6282a74e5f4SJed Brown ierr = MPIPetsc_Type_compare_contig(unit,MPIU_COMPLEX,&nPetscComplexContig);CHKERRQ(ierr); 62995fce210SBarry Smith #endif 63095fce210SBarry Smith ierr = MPIPetsc_Type_compare(unit,MPI_2INT,&is2Int);CHKERRQ(ierr); 63195fce210SBarry Smith ierr = MPIPetsc_Type_compare(unit,MPIU_2INT,&is2PetscInt);CHKERRQ(ierr); 6322a74e5f4SJed Brown link->bs = 1; 63353deab39SPeter Brune if (isInt) {PackInit_int(link); PackInit_Logical_int(link); PackInit_Bitwise_int(link);} 63453deab39SPeter Brune else if (isPetscInt) {PackInit_PetscInt(link); PackInit_Logical_PetscInt(link); PackInit_Bitwise_PetscInt(link);} 63553deab39SPeter Brune else if (isPetscReal) {PackInit_PetscReal(link); PackInit_Logical_PetscReal(link);} 63695fce210SBarry Smith #if defined(PETSC_HAVE_COMPLEX) 6372a74e5f4SJed Brown else if (isPetscComplex) PackInit_PetscComplex_1(link); 63895fce210SBarry Smith #endif 63995fce210SBarry Smith else if (is2Int) PackInit_int_int(link); 64095fce210SBarry Smith else if (is2PetscInt) PackInit_PetscInt_PetscInt(link); 6412a74e5f4SJed Brown else if (nPetscIntContig) { 6422a74e5f4SJed Brown if (nPetscIntContig%7 == 0) PackInit_PetscInt_7(link); 6432a74e5f4SJed Brown else if (nPetscIntContig%5 == 0) PackInit_PetscInt_5(link); 6442a74e5f4SJed Brown else if (nPetscIntContig%4 == 0) PackInit_PetscInt_4(link); 6452a74e5f4SJed Brown else if (nPetscIntContig%3 == 0) PackInit_PetscInt_3(link); 6462a74e5f4SJed Brown else if (nPetscIntContig%2 == 0) PackInit_PetscInt_2(link); 6472a74e5f4SJed Brown else PackInit_PetscInt(link); 6482a74e5f4SJed Brown link->bs = nPetscIntContig; 6492a74e5f4SJed Brown link->unitbytes *= nPetscIntContig; 6502a74e5f4SJed Brown } else if (nPetscRealContig) { 6512a74e5f4SJed Brown if (nPetscRealContig%7 == 0) PackInit_PetscReal_7(link); 6522a74e5f4SJed Brown else if (nPetscRealContig%5 == 0) PackInit_PetscReal_5(link); 6532a74e5f4SJed Brown else if (nPetscRealContig%4 == 0) PackInit_PetscReal_4(link); 6542a74e5f4SJed Brown else if (nPetscRealContig%3 == 0) PackInit_PetscReal_3(link); 6552a74e5f4SJed Brown else if (nPetscRealContig%2 == 0) PackInit_PetscReal_2(link); 6562a74e5f4SJed Brown else PackInit_PetscReal(link); 6572a74e5f4SJed Brown link->bs = nPetscRealContig; 6582a74e5f4SJed Brown link->unitbytes *= nPetscRealContig; 6592a74e5f4SJed Brown #if defined(PETSC_HAVE_COMPLEX) 6602a74e5f4SJed Brown } else if (nPetscComplexContig) { 6612a74e5f4SJed Brown if (nPetscComplexContig%7 == 0) PackInit_PetscComplex_7(link); 6622a74e5f4SJed Brown else if (nPetscComplexContig%5 == 0) PackInit_PetscComplex_5(link); 6632a74e5f4SJed Brown else if (nPetscComplexContig%4 == 0) PackInit_PetscComplex_4(link); 6642a74e5f4SJed Brown else if (nPetscComplexContig%3 == 0) PackInit_PetscComplex_3(link); 6652a74e5f4SJed Brown else if (nPetscComplexContig%2 == 0) PackInit_PetscComplex_2(link); 6662a74e5f4SJed Brown else PackInit_PetscComplex_1(link); 6672a74e5f4SJed Brown link->bs = nPetscComplexContig; 6682a74e5f4SJed Brown link->unitbytes *= nPetscComplexContig; 6692a74e5f4SJed Brown #endif 6702a74e5f4SJed Brown } else { 671c3a59b84SJed Brown MPI_Aint lb,bytes; 672c3a59b84SJed Brown ierr = MPI_Type_get_extent(unit,&lb,&bytes);CHKERRQ(ierr); 673c3a59b84SJed Brown if (lb != 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Datatype with nonzero lower bound %ld\n",(long)lb); 67495fce210SBarry Smith if (bytes % sizeof(int)) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"No support for type size not divisible by %D",sizeof(int)); 67595fce210SBarry Smith switch (bytes / sizeof(int)) { 67695fce210SBarry Smith case 1: PackInit_block_int_1(link); break; 67795fce210SBarry Smith case 2: PackInit_block_int_2(link); break; 67895fce210SBarry Smith case 3: PackInit_block_int_3(link); break; 67995fce210SBarry Smith case 4: PackInit_block_int_4(link); break; 68095fce210SBarry Smith case 5: PackInit_block_int_5(link); break; 68195fce210SBarry Smith case 6: PackInit_block_int_6(link); break; 68295fce210SBarry Smith case 7: PackInit_block_int_7(link); break; 68395fce210SBarry Smith case 8: PackInit_block_int_8(link); break; 68495fce210SBarry Smith default: SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"No support for arbitrary block sizes"); 68595fce210SBarry Smith } 68695fce210SBarry Smith } 68795fce210SBarry Smith ierr = MPI_Type_dup(unit,&link->unit);CHKERRQ(ierr); 68895fce210SBarry Smith PetscFunctionReturn(0); 68995fce210SBarry Smith } 69095fce210SBarry Smith 6912a74e5f4SJed Brown static PetscErrorCode PetscSFBasicPackGetUnpackOp(PetscSF sf,PetscSFBasicPack link,MPI_Op op,void (**UnpackOp)(PetscInt,PetscInt,const PetscInt*,void*,const void*)) 69295fce210SBarry Smith { 69395fce210SBarry Smith PetscFunctionBegin; 69495fce210SBarry Smith *UnpackOp = NULL; 6958bfbc91cSJed Brown if (op == MPIU_REPLACE) *UnpackOp = link->UnpackInsert; 69695fce210SBarry Smith else if (op == MPI_SUM || op == MPIU_SUM) *UnpackOp = link->UnpackAdd; 69753deab39SPeter Brune else if (op == MPI_PROD) *UnpackOp = link->UnpackMult; 69895fce210SBarry Smith else if (op == MPI_MAX || op == MPIU_MAX) *UnpackOp = link->UnpackMax; 69995fce210SBarry Smith else if (op == MPI_MIN || op == MPIU_MIN) *UnpackOp = link->UnpackMin; 70053deab39SPeter Brune else if (op == MPI_LAND) *UnpackOp = link->UnpackLAND; 70153deab39SPeter Brune else if (op == MPI_BAND) *UnpackOp = link->UnpackBAND; 70253deab39SPeter Brune else if (op == MPI_LOR) *UnpackOp = link->UnpackLOR; 70353deab39SPeter Brune else if (op == MPI_BOR) *UnpackOp = link->UnpackBOR; 70453deab39SPeter Brune else if (op == MPI_LXOR) *UnpackOp = link->UnpackLXOR; 70553deab39SPeter Brune else if (op == MPI_BXOR) *UnpackOp = link->UnpackBXOR; 70695fce210SBarry Smith else if (op == MPI_MAXLOC) *UnpackOp = link->UnpackMaxloc; 70795fce210SBarry Smith else if (op == MPI_MINLOC) *UnpackOp = link->UnpackMinloc; 7081620da3bSToby Isaac else *UnpackOp = NULL; 70995fce210SBarry Smith PetscFunctionReturn(0); 71095fce210SBarry Smith } 7112a74e5f4SJed Brown static PetscErrorCode PetscSFBasicPackGetFetchAndOp(PetscSF sf,PetscSFBasicPack link,MPI_Op op,void (**FetchAndOp)(PetscInt,PetscInt,const PetscInt*,void*,void*)) 71295fce210SBarry Smith { 71395fce210SBarry Smith PetscFunctionBegin; 71495fce210SBarry Smith *FetchAndOp = NULL; 7158bfbc91cSJed Brown if (op == MPIU_REPLACE) *FetchAndOp = link->FetchAndInsert; 71695fce210SBarry Smith else if (op == MPI_SUM || op == MPIU_SUM) *FetchAndOp = link->FetchAndAdd; 71795fce210SBarry Smith else if (op == MPI_MAX || op == MPIU_MAX) *FetchAndOp = link->FetchAndMax; 71895fce210SBarry Smith else if (op == MPI_MIN || op == MPIU_MIN) *FetchAndOp = link->FetchAndMin; 71995fce210SBarry Smith else if (op == MPI_MAXLOC) *FetchAndOp = link->FetchAndMaxloc; 72095fce210SBarry Smith else if (op == MPI_MINLOC) *FetchAndOp = link->FetchAndMinloc; 72153deab39SPeter Brune else if (op == MPI_PROD) *FetchAndOp = link->FetchAndMult; 72253deab39SPeter Brune else if (op == MPI_LAND) *FetchAndOp = link->FetchAndLAND; 72353deab39SPeter Brune else if (op == MPI_BAND) *FetchAndOp = link->FetchAndBAND; 72453deab39SPeter Brune else if (op == MPI_LOR) *FetchAndOp = link->FetchAndLOR; 72553deab39SPeter Brune else if (op == MPI_BOR) *FetchAndOp = link->FetchAndBOR; 72653deab39SPeter Brune else if (op == MPI_LXOR) *FetchAndOp = link->FetchAndLXOR; 72753deab39SPeter Brune else if (op == MPI_BXOR) *FetchAndOp = link->FetchAndBXOR; 72895fce210SBarry Smith else SETERRQ(PetscObjectComm((PetscObject)sf),PETSC_ERR_SUP,"No support for MPI_Op"); 72995fce210SBarry Smith PetscFunctionReturn(0); 73095fce210SBarry Smith } 73195fce210SBarry Smith 73295fce210SBarry Smith static PetscErrorCode PetscSFBasicPackGetReqs(PetscSF sf,PetscSFBasicPack link,MPI_Request **rootreqs,MPI_Request **leafreqs) 73395fce210SBarry Smith { 73495fce210SBarry Smith PetscSF_Basic *bas = (PetscSF_Basic*)sf->data; 73595fce210SBarry Smith 73695fce210SBarry Smith PetscFunctionBegin; 73795fce210SBarry Smith if (rootreqs) *rootreqs = link->requests; 738c943f53fSJed Brown if (leafreqs) *leafreqs = link->requests + (bas->niranks - bas->ndiranks); 73995fce210SBarry Smith PetscFunctionReturn(0); 74095fce210SBarry Smith } 74195fce210SBarry Smith 74295fce210SBarry Smith static PetscErrorCode PetscSFBasicPackWaitall(PetscSF sf,PetscSFBasicPack link) 74395fce210SBarry Smith { 74495fce210SBarry Smith PetscSF_Basic *bas = (PetscSF_Basic*)sf->data; 74595fce210SBarry Smith PetscErrorCode ierr; 74695fce210SBarry Smith 74795fce210SBarry Smith PetscFunctionBegin; 748c943f53fSJed Brown ierr = MPI_Waitall(bas->niranks+sf->nranks-(bas->ndiranks+sf->ndranks),link->requests,MPI_STATUSES_IGNORE);CHKERRQ(ierr); 74995fce210SBarry Smith PetscFunctionReturn(0); 75095fce210SBarry Smith } 75195fce210SBarry Smith 752c943f53fSJed Brown static PetscErrorCode PetscSFBasicGetRootInfo(PetscSF sf,PetscInt *nrootranks,PetscInt *ndrootranks,const PetscMPIInt **rootranks,const PetscInt **rootoffset,const PetscInt **rootloc) 75395fce210SBarry Smith { 75495fce210SBarry Smith PetscSF_Basic *bas = (PetscSF_Basic*)sf->data; 75595fce210SBarry Smith 75695fce210SBarry Smith PetscFunctionBegin; 75795fce210SBarry Smith if (nrootranks) *nrootranks = bas->niranks; 758c943f53fSJed Brown if (ndrootranks) *ndrootranks = bas->ndiranks; 75995fce210SBarry Smith if (rootranks) *rootranks = bas->iranks; 76095fce210SBarry Smith if (rootoffset) *rootoffset = bas->ioffset; 76195fce210SBarry Smith if (rootloc) *rootloc = bas->irootloc; 76295fce210SBarry Smith PetscFunctionReturn(0); 76395fce210SBarry Smith } 76495fce210SBarry Smith 765c943f53fSJed Brown static PetscErrorCode PetscSFBasicGetLeafInfo(PetscSF sf,PetscInt *nleafranks,PetscInt *ndleafranks,const PetscMPIInt **leafranks,const PetscInt **leafoffset,const PetscInt **leafloc) 76695fce210SBarry Smith { 76795fce210SBarry Smith PetscFunctionBegin; 76895fce210SBarry Smith if (nleafranks) *nleafranks = sf->nranks; 769c943f53fSJed Brown if (ndleafranks) *ndleafranks = sf->ndranks; 77095fce210SBarry Smith if (leafranks) *leafranks = sf->ranks; 77195fce210SBarry Smith if (leafoffset) *leafoffset = sf->roffset; 77295fce210SBarry Smith if (leafloc) *leafloc = sf->rmine; 77395fce210SBarry Smith PetscFunctionReturn(0); 77495fce210SBarry Smith } 77595fce210SBarry Smith 77695fce210SBarry Smith static PetscErrorCode PetscSFBasicGetPack(PetscSF sf,MPI_Datatype unit,const void *key,PetscSFBasicPack *mylink) 77795fce210SBarry Smith { 77895fce210SBarry Smith PetscSF_Basic *bas = (PetscSF_Basic*)sf->data; 77995fce210SBarry Smith PetscErrorCode ierr; 78095fce210SBarry Smith PetscSFBasicPack link,*p; 781c943f53fSJed Brown PetscInt nrootranks,ndrootranks,nleafranks,ndleafranks,i; 78295fce210SBarry Smith const PetscInt *rootoffset,*leafoffset; 78395fce210SBarry Smith 78495fce210SBarry Smith PetscFunctionBegin; 78595fce210SBarry Smith /* Look for types in cache */ 78695fce210SBarry Smith for (p=&bas->avail; (link=*p); p=&link->next) { 78795fce210SBarry Smith PetscBool match; 78895fce210SBarry Smith ierr = MPIPetsc_Type_compare(unit,link->unit,&match);CHKERRQ(ierr); 78995fce210SBarry Smith if (match) { 79095fce210SBarry Smith *p = link->next; /* Remove from available list */ 79195fce210SBarry Smith goto found; 79295fce210SBarry Smith } 79395fce210SBarry Smith } 79495fce210SBarry Smith 79595fce210SBarry Smith /* Create new composite types for each send rank */ 796c943f53fSJed Brown ierr = PetscSFBasicGetRootInfo(sf,&nrootranks,&ndrootranks,NULL,&rootoffset,NULL);CHKERRQ(ierr); 797c943f53fSJed Brown ierr = PetscSFBasicGetLeafInfo(sf,&nleafranks,&ndleafranks,NULL,&leafoffset,NULL);CHKERRQ(ierr); 798b00a9115SJed Brown ierr = PetscNew(&link);CHKERRQ(ierr); 79995fce210SBarry Smith ierr = PetscSFBasicPackTypeSetup(link,unit);CHKERRQ(ierr); 800bf39f1bfSJed Brown ierr = PetscMalloc2(nrootranks,&link->root,nleafranks,&link->leaf);CHKERRQ(ierr); 801bf39f1bfSJed Brown for (i=0; i<nrootranks; i++) { 802bf39f1bfSJed Brown ierr = PetscMalloc((rootoffset[i+1]-rootoffset[i])*link->unitbytes,&link->root[i]);CHKERRQ(ierr); 803bf39f1bfSJed Brown } 804bf39f1bfSJed Brown for (i=0; i<nleafranks; i++) { 805c943f53fSJed Brown if (i < ndleafranks) { /* Leaf buffers for distinguished ranks are pointers directly into root buffers */ 806c943f53fSJed Brown if (ndrootranks != 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Cannot match distinguished ranks"); 807c943f53fSJed Brown link->leaf[i] = link->root[0]; 808c943f53fSJed Brown continue; 809c943f53fSJed Brown } 810bf39f1bfSJed Brown ierr = PetscMalloc((leafoffset[i+1]-leafoffset[i])*link->unitbytes,&link->leaf[i]);CHKERRQ(ierr); 811bf39f1bfSJed Brown } 8120f880758SHong Zhang ierr = PetscCalloc1(nrootranks+nleafranks,&link->requests);CHKERRQ(ierr); 81395fce210SBarry Smith 81495fce210SBarry Smith found: 81595fce210SBarry Smith link->key = key; 81695fce210SBarry Smith link->next = bas->inuse; 81795fce210SBarry Smith bas->inuse = link; 81895fce210SBarry Smith 81995fce210SBarry Smith *mylink = link; 82095fce210SBarry Smith PetscFunctionReturn(0); 82195fce210SBarry Smith } 82295fce210SBarry Smith 82395fce210SBarry Smith static PetscErrorCode PetscSFBasicGetPackInUse(PetscSF sf,MPI_Datatype unit,const void *key,PetscCopyMode cmode,PetscSFBasicPack *mylink) 82495fce210SBarry Smith { 82595fce210SBarry Smith PetscSF_Basic *bas = (PetscSF_Basic*)sf->data; 82695fce210SBarry Smith PetscErrorCode ierr; 82795fce210SBarry Smith PetscSFBasicPack link,*p; 82895fce210SBarry Smith 82995fce210SBarry Smith PetscFunctionBegin; 83095fce210SBarry Smith /* Look for types in cache */ 83195fce210SBarry Smith for (p=&bas->inuse; (link=*p); p=&link->next) { 83295fce210SBarry Smith PetscBool match; 83395fce210SBarry Smith ierr = MPIPetsc_Type_compare(unit,link->unit,&match);CHKERRQ(ierr); 83445038af3SLawrence Mitchell if (match && (key == link->key)) { 83595fce210SBarry Smith switch (cmode) { 83695fce210SBarry Smith case PETSC_OWN_POINTER: *p = link->next; break; /* Remove from inuse list */ 83795fce210SBarry Smith case PETSC_USE_POINTER: break; 83895fce210SBarry Smith default: SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"invalid cmode"); 83995fce210SBarry Smith } 84095fce210SBarry Smith *mylink = link; 84195fce210SBarry Smith PetscFunctionReturn(0); 84295fce210SBarry Smith } 84395fce210SBarry Smith } 84495fce210SBarry Smith SETERRQ(PetscObjectComm((PetscObject)sf),PETSC_ERR_ARG_WRONGSTATE,"Could not find pack"); 84595fce210SBarry Smith PetscFunctionReturn(0); 84695fce210SBarry Smith } 84795fce210SBarry Smith 84895fce210SBarry Smith static PetscErrorCode PetscSFBasicReclaimPack(PetscSF sf,PetscSFBasicPack *link) 84995fce210SBarry Smith { 85095fce210SBarry Smith PetscSF_Basic *bas = (PetscSF_Basic*)sf->data; 85195fce210SBarry Smith 85295fce210SBarry Smith PetscFunctionBegin; 85395fce210SBarry Smith (*link)->key = NULL; 85495fce210SBarry Smith (*link)->next = bas->avail; 85595fce210SBarry Smith bas->avail = *link; 85695fce210SBarry Smith *link = NULL; 85795fce210SBarry Smith PetscFunctionReturn(0); 85895fce210SBarry Smith } 85995fce210SBarry Smith 8604416b707SBarry Smith static PetscErrorCode PetscSFSetFromOptions_Basic(PetscOptionItems *PetscOptionsObject,PetscSF sf) 86195fce210SBarry Smith { 86295fce210SBarry Smith PetscErrorCode ierr; 86395fce210SBarry Smith 86495fce210SBarry Smith PetscFunctionBegin; 865e55864a3SBarry Smith ierr = PetscOptionsHead(PetscOptionsObject,"PetscSF Basic options");CHKERRQ(ierr); 86695fce210SBarry Smith ierr = PetscOptionsTail();CHKERRQ(ierr); 86795fce210SBarry Smith PetscFunctionReturn(0); 86895fce210SBarry Smith } 86995fce210SBarry Smith 87095fce210SBarry Smith static PetscErrorCode PetscSFReset_Basic(PetscSF sf) 87195fce210SBarry Smith { 87295fce210SBarry Smith PetscSF_Basic *bas = (PetscSF_Basic*)sf->data; 87395fce210SBarry Smith PetscErrorCode ierr; 87495fce210SBarry Smith PetscSFBasicPack link,next; 87595fce210SBarry Smith 87695fce210SBarry Smith PetscFunctionBegin; 87729046d53SLisandro Dalcin if (bas->inuse) SETERRQ(PetscObjectComm((PetscObject)sf),PETSC_ERR_ARG_WRONGSTATE,"Outstanding operation has not been completed"); 878c943f53fSJed Brown ierr = PetscFree2(bas->iranks,bas->ioffset);CHKERRQ(ierr); 879c943f53fSJed Brown ierr = PetscFree(bas->irootloc);CHKERRQ(ierr); 88095fce210SBarry Smith for (link=bas->avail; link; link=next) { 881bf39f1bfSJed Brown PetscInt i; 88295fce210SBarry Smith next = link->next; 88395fce210SBarry Smith ierr = MPI_Type_free(&link->unit);CHKERRQ(ierr); 884bf39f1bfSJed Brown for (i=0; i<bas->niranks; i++) {ierr = PetscFree(link->root[i]);CHKERRQ(ierr);} 885c943f53fSJed Brown for (i=sf->ndranks; i<sf->nranks; i++) {ierr = PetscFree(link->leaf[i]);CHKERRQ(ierr);} /* Free only non-distinguished leaf buffers */ 88695fce210SBarry Smith ierr = PetscFree2(link->root,link->leaf);CHKERRQ(ierr); 88795fce210SBarry Smith ierr = PetscFree(link->requests);CHKERRQ(ierr); 88895fce210SBarry Smith ierr = PetscFree(link);CHKERRQ(ierr); 88995fce210SBarry Smith } 89095fce210SBarry Smith bas->avail = NULL; 89195fce210SBarry Smith PetscFunctionReturn(0); 89295fce210SBarry Smith } 89395fce210SBarry Smith 89495fce210SBarry Smith static PetscErrorCode PetscSFDestroy_Basic(PetscSF sf) 89595fce210SBarry Smith { 89695fce210SBarry Smith PetscErrorCode ierr; 89795fce210SBarry Smith 89895fce210SBarry Smith PetscFunctionBegin; 89929046d53SLisandro Dalcin ierr = PetscSFReset_Basic(sf);CHKERRQ(ierr); 90095fce210SBarry Smith ierr = PetscFree(sf->data);CHKERRQ(ierr); 90195fce210SBarry Smith PetscFunctionReturn(0); 90295fce210SBarry Smith } 90395fce210SBarry Smith 90495fce210SBarry Smith static PetscErrorCode PetscSFView_Basic(PetscSF sf,PetscViewer viewer) 90595fce210SBarry Smith { 90695fce210SBarry Smith /* PetscSF_Basic *bas = (PetscSF_Basic*)sf->data; */ 90795fce210SBarry Smith PetscErrorCode ierr; 90895fce210SBarry Smith PetscBool iascii; 90995fce210SBarry Smith 91095fce210SBarry Smith PetscFunctionBegin; 91195fce210SBarry Smith ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 91295fce210SBarry Smith if (iascii) { 91395fce210SBarry Smith ierr = PetscViewerASCIIPrintf(viewer," sort=%s\n",sf->rankorder ? "rank-order" : "unordered");CHKERRQ(ierr); 91495fce210SBarry Smith } 91595fce210SBarry Smith PetscFunctionReturn(0); 91695fce210SBarry Smith } 91795fce210SBarry Smith 9183482bfa8SJunchao Zhang static PetscErrorCode PetscSFBcastAndOpBegin_Basic(PetscSF sf,MPI_Datatype unit,const void *rootdata,void *leafdata,MPI_Op op) 91995fce210SBarry Smith { 92095fce210SBarry Smith PetscSF_Basic *bas = (PetscSF_Basic*)sf->data; 92195fce210SBarry Smith PetscErrorCode ierr; 92295fce210SBarry Smith PetscSFBasicPack link; 923c943f53fSJed Brown PetscInt i,nrootranks,ndrootranks,nleafranks,ndleafranks; 92495fce210SBarry Smith const PetscInt *rootoffset,*leafoffset,*rootloc,*leafloc; 92595fce210SBarry Smith const PetscMPIInt *rootranks,*leafranks; 92695fce210SBarry Smith MPI_Request *rootreqs,*leafreqs; 92795fce210SBarry Smith 92895fce210SBarry Smith PetscFunctionBegin; 929c943f53fSJed Brown ierr = PetscSFBasicGetRootInfo(sf,&nrootranks,&ndrootranks,&rootranks,&rootoffset,&rootloc);CHKERRQ(ierr); 930c943f53fSJed Brown ierr = PetscSFBasicGetLeafInfo(sf,&nleafranks,&ndleafranks,&leafranks,&leafoffset,&leafloc);CHKERRQ(ierr); 93195fce210SBarry Smith ierr = PetscSFBasicGetPack(sf,unit,rootdata,&link);CHKERRQ(ierr); 93295fce210SBarry Smith 93395fce210SBarry Smith ierr = PetscSFBasicPackGetReqs(sf,link,&rootreqs,&leafreqs);CHKERRQ(ierr); 934c943f53fSJed Brown /* Eagerly post leaf receives, but only from non-distinguished ranks -- distinguished ranks will receive via shared memory */ 935c943f53fSJed Brown for (i=ndleafranks; i<nleafranks; i++) { 93695fce210SBarry Smith PetscMPIInt n = leafoffset[i+1] - leafoffset[i]; 937c943f53fSJed Brown ierr = MPI_Irecv(link->leaf[i],n,unit,leafranks[i],bas->tag,PetscObjectComm((PetscObject)sf),&leafreqs[i-ndleafranks]);CHKERRQ(ierr); 93895fce210SBarry Smith } 93995fce210SBarry Smith /* Pack and send root data */ 94095fce210SBarry Smith for (i=0; i<nrootranks; i++) { 94195fce210SBarry Smith PetscMPIInt n = rootoffset[i+1] - rootoffset[i]; 942bf39f1bfSJed Brown void *packstart = link->root[i]; 9432a74e5f4SJed Brown (*link->Pack)(n,link->bs,rootloc+rootoffset[i],rootdata,packstart); 944c943f53fSJed Brown if (i < ndrootranks) continue; /* shared memory */ 945c943f53fSJed Brown ierr = MPI_Isend(packstart,n,unit,rootranks[i],bas->tag,PetscObjectComm((PetscObject)sf),&rootreqs[i-ndrootranks]);CHKERRQ(ierr); 94695fce210SBarry Smith } 94795fce210SBarry Smith PetscFunctionReturn(0); 94895fce210SBarry Smith } 94995fce210SBarry Smith 9503482bfa8SJunchao Zhang PetscErrorCode PetscSFBcastAndOpEnd_Basic(PetscSF sf,MPI_Datatype unit,const void *rootdata,void *leafdata,MPI_Op op) 95195fce210SBarry Smith { 95295fce210SBarry Smith PetscErrorCode ierr; 95395fce210SBarry Smith PetscSFBasicPack link; 954c943f53fSJed Brown PetscInt i,nleafranks,ndleafranks; 95595fce210SBarry Smith const PetscInt *leafoffset,*leafloc; 9563482bfa8SJunchao Zhang void (*UnpackOp)(PetscInt,PetscInt,const PetscInt*,void*,const void*); 9573482bfa8SJunchao Zhang PetscMPIInt typesize = -1; 95895fce210SBarry Smith 95995fce210SBarry Smith PetscFunctionBegin; 96095fce210SBarry Smith ierr = PetscSFBasicGetPackInUse(sf,unit,rootdata,PETSC_OWN_POINTER,&link);CHKERRQ(ierr); 96195fce210SBarry Smith ierr = PetscSFBasicPackWaitall(sf,link);CHKERRQ(ierr); 962c943f53fSJed Brown ierr = PetscSFBasicGetLeafInfo(sf,&nleafranks,&ndleafranks,NULL,&leafoffset,&leafloc);CHKERRQ(ierr); 9633482bfa8SJunchao Zhang ierr = PetscSFBasicPackGetUnpackOp(sf,link,op,&UnpackOp);CHKERRQ(ierr); 9643482bfa8SJunchao Zhang 9653482bfa8SJunchao Zhang if (UnpackOp) { typesize = link->unitbytes; } 9663482bfa8SJunchao Zhang else { ierr = MPI_Type_size(unit,&typesize);CHKERRQ(ierr); } 9673482bfa8SJunchao Zhang 96895fce210SBarry Smith for (i=0; i<nleafranks; i++) { 96995fce210SBarry Smith PetscMPIInt n = leafoffset[i+1] - leafoffset[i]; 9703482bfa8SJunchao Zhang char *packstart = (char *) link->leaf[i]; 9713482bfa8SJunchao Zhang if (UnpackOp) { (*UnpackOp)(n,link->bs,leafloc+leafoffset[i],leafdata,(const void *)packstart); } 9723482bfa8SJunchao Zhang #if defined(PETSC_HAVE_MPI_REDUCE_LOCAL) 9733482bfa8SJunchao Zhang else if (n) { /* the op should be defined to operate on the whole datatype, so we ignore link->bs */ 9743482bfa8SJunchao Zhang PetscInt j; 9753482bfa8SJunchao Zhang for (j=0; j<n; j++) { ierr = MPI_Reduce_local(packstart+j*typesize,((char *) leafdata)+(leafloc[leafoffset[i]+j])*typesize,1,unit,op);CHKERRQ(ierr); } 97695fce210SBarry Smith } 9773482bfa8SJunchao Zhang #else 9783482bfa8SJunchao Zhang else { SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"No unpacking reduction operation for this MPI_Op"); } 9793482bfa8SJunchao Zhang #endif 9803482bfa8SJunchao Zhang } 9813482bfa8SJunchao Zhang 98295fce210SBarry Smith ierr = PetscSFBasicReclaimPack(sf,&link);CHKERRQ(ierr); 98395fce210SBarry Smith PetscFunctionReturn(0); 98495fce210SBarry Smith } 98595fce210SBarry Smith 9863482bfa8SJunchao Zhang /* Send from roots to leaves */ 9873482bfa8SJunchao Zhang static PetscErrorCode PetscSFBcastBegin_Basic(PetscSF sf,MPI_Datatype unit,const void *rootdata,void *leafdata) 9883482bfa8SJunchao Zhang { 9893482bfa8SJunchao Zhang PetscErrorCode ierr; 9903482bfa8SJunchao Zhang 9913482bfa8SJunchao Zhang PetscFunctionBegin; 9923482bfa8SJunchao Zhang ierr = PetscSFBcastAndOpBegin_Basic(sf,unit,rootdata,leafdata,MPI_REPLACE);CHKERRQ(ierr); 9933482bfa8SJunchao Zhang PetscFunctionReturn(0); 9943482bfa8SJunchao Zhang } 9953482bfa8SJunchao Zhang 9963482bfa8SJunchao Zhang PetscErrorCode PetscSFBcastEnd_Basic(PetscSF sf,MPI_Datatype unit,const void *rootdata,void *leafdata) 9973482bfa8SJunchao Zhang { 9983482bfa8SJunchao Zhang PetscErrorCode ierr; 9993482bfa8SJunchao Zhang 10003482bfa8SJunchao Zhang PetscFunctionBegin; 10013482bfa8SJunchao Zhang ierr = PetscSFBcastAndOpEnd_Basic(sf,unit,rootdata,leafdata,MPI_REPLACE);CHKERRQ(ierr); 10023482bfa8SJunchao Zhang PetscFunctionReturn(0); 10033482bfa8SJunchao Zhang } 10043482bfa8SJunchao Zhang 100595fce210SBarry Smith /* leaf -> root with reduction */ 100695fce210SBarry Smith PetscErrorCode PetscSFReduceBegin_Basic(PetscSF sf,MPI_Datatype unit,const void *leafdata,void *rootdata,MPI_Op op) 100795fce210SBarry Smith { 100895fce210SBarry Smith PetscSF_Basic *bas = (PetscSF_Basic*)sf->data; 100995fce210SBarry Smith PetscSFBasicPack link; 101095fce210SBarry Smith PetscErrorCode ierr; 1011c943f53fSJed Brown PetscInt i,nrootranks,ndrootranks,nleafranks,ndleafranks; 101295fce210SBarry Smith const PetscInt *rootoffset,*leafoffset,*rootloc,*leafloc; 101395fce210SBarry Smith const PetscMPIInt *rootranks,*leafranks; 101495fce210SBarry Smith MPI_Request *rootreqs,*leafreqs; 101595fce210SBarry Smith 101695fce210SBarry Smith PetscFunctionBegin; 1017c943f53fSJed Brown ierr = PetscSFBasicGetRootInfo(sf,&nrootranks,&ndrootranks,&rootranks,&rootoffset,&rootloc);CHKERRQ(ierr); 1018c943f53fSJed Brown ierr = PetscSFBasicGetLeafInfo(sf,&nleafranks,&ndleafranks,&leafranks,&leafoffset,&leafloc);CHKERRQ(ierr); 101995fce210SBarry Smith ierr = PetscSFBasicGetPack(sf,unit,rootdata,&link);CHKERRQ(ierr); 102095fce210SBarry Smith 102195fce210SBarry Smith ierr = PetscSFBasicPackGetReqs(sf,link,&rootreqs,&leafreqs);CHKERRQ(ierr); 1022c943f53fSJed Brown /* Eagerly post root receives for non-distinguished ranks */ 1023c943f53fSJed Brown for (i=ndrootranks; i<nrootranks; i++) { 102495fce210SBarry Smith PetscMPIInt n = rootoffset[i+1] - rootoffset[i]; 1025c943f53fSJed Brown ierr = MPI_Irecv(link->root[i],n,unit,rootranks[i],bas->tag,PetscObjectComm((PetscObject)sf),&rootreqs[i-ndrootranks]);CHKERRQ(ierr); 102695fce210SBarry Smith } 102795fce210SBarry Smith /* Pack and send leaf data */ 102895fce210SBarry Smith for (i=0; i<nleafranks; i++) { 102995fce210SBarry Smith PetscMPIInt n = leafoffset[i+1] - leafoffset[i]; 1030bf39f1bfSJed Brown void *packstart = link->leaf[i]; 10312a74e5f4SJed Brown (*link->Pack)(n,link->bs,leafloc+leafoffset[i],leafdata,packstart); 1032c943f53fSJed Brown if (i < ndleafranks) continue; /* shared memory */ 1033c943f53fSJed Brown ierr = MPI_Isend(packstart,n,unit,leafranks[i],bas->tag,PetscObjectComm((PetscObject)sf),&leafreqs[i-ndleafranks]);CHKERRQ(ierr); 103495fce210SBarry Smith } 103595fce210SBarry Smith PetscFunctionReturn(0); 103695fce210SBarry Smith } 103795fce210SBarry Smith 103895fce210SBarry Smith static PetscErrorCode PetscSFReduceEnd_Basic(PetscSF sf,MPI_Datatype unit,const void *leafdata,void *rootdata,MPI_Op op) 103995fce210SBarry Smith { 10402a74e5f4SJed Brown void (*UnpackOp)(PetscInt,PetscInt,const PetscInt*,void*,const void*); 104195fce210SBarry Smith PetscErrorCode ierr; 104295fce210SBarry Smith PetscSFBasicPack link; 104395fce210SBarry Smith PetscInt i,nrootranks; 10441620da3bSToby Isaac PetscMPIInt typesize = -1; 104595fce210SBarry Smith const PetscInt *rootoffset,*rootloc; 104695fce210SBarry Smith 104795fce210SBarry Smith PetscFunctionBegin; 104895fce210SBarry Smith ierr = PetscSFBasicGetPackInUse(sf,unit,rootdata,PETSC_OWN_POINTER,&link);CHKERRQ(ierr); 104995fce210SBarry Smith /* This implementation could be changed to unpack as receives arrive, at the cost of non-determinism */ 105095fce210SBarry Smith ierr = PetscSFBasicPackWaitall(sf,link);CHKERRQ(ierr); 1051c943f53fSJed Brown ierr = PetscSFBasicGetRootInfo(sf,&nrootranks,NULL,NULL,&rootoffset,&rootloc);CHKERRQ(ierr); 105295fce210SBarry Smith ierr = PetscSFBasicPackGetUnpackOp(sf,link,op,&UnpackOp);CHKERRQ(ierr); 10531620da3bSToby Isaac if (UnpackOp) { 10541620da3bSToby Isaac typesize = link->unitbytes; 10551620da3bSToby Isaac } 10561620da3bSToby Isaac else { 10571620da3bSToby Isaac ierr = MPI_Type_size(unit,&typesize);CHKERRQ(ierr); 10581620da3bSToby Isaac } 105995fce210SBarry Smith for (i=0; i<nrootranks; i++) { 106095fce210SBarry Smith PetscMPIInt n = rootoffset[i+1] - rootoffset[i]; 1061bf39f1bfSJed Brown char *packstart = (char *) link->root[i]; 106295fce210SBarry Smith 10631620da3bSToby Isaac if (UnpackOp) { 106488ac5ce8SToby Isaac (*UnpackOp)(n,link->bs,rootloc+rootoffset[i],rootdata,(const void *)packstart); 106595fce210SBarry Smith } 106662795ce3SStefano Zampini #if defined(PETSC_HAVE_MPI_REDUCE_LOCAL) 106778ec4774SToby Isaac else if (n) { /* the op should be defined to operate on the whole datatype, so we ignore link->bs */ 106878ec4774SToby Isaac PetscInt j; 10691620da3bSToby Isaac 10701620da3bSToby Isaac for (j = 0; j < n; j++) { 107178ec4774SToby Isaac ierr = MPI_Reduce_local(packstart+j*typesize,((char *) rootdata)+(rootloc[rootoffset[i]+j])*typesize,1,unit,op);CHKERRQ(ierr); 10721620da3bSToby Isaac } 10731620da3bSToby Isaac } 1074a9ec7e9eSToby Isaac #else 1075a9ec7e9eSToby Isaac else { 1076a9ec7e9eSToby Isaac SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"No unpacking reduction operation for this MPI_Op"); 1077a9ec7e9eSToby Isaac } 1078a9ec7e9eSToby Isaac #endif 10791620da3bSToby Isaac } 108095fce210SBarry Smith ierr = PetscSFBasicReclaimPack(sf,&link);CHKERRQ(ierr); 108195fce210SBarry Smith PetscFunctionReturn(0); 108295fce210SBarry Smith } 108395fce210SBarry Smith 108495fce210SBarry Smith static PetscErrorCode PetscSFFetchAndOpBegin_Basic(PetscSF sf,MPI_Datatype unit,void *rootdata,const void *leafdata,void *leafupdate,MPI_Op op) 108595fce210SBarry Smith { 108695fce210SBarry Smith PetscErrorCode ierr; 108795fce210SBarry Smith 108895fce210SBarry Smith PetscFunctionBegin; 108995fce210SBarry Smith ierr = PetscSFReduceBegin_Basic(sf,unit,leafdata,rootdata,op);CHKERRQ(ierr); 109095fce210SBarry Smith PetscFunctionReturn(0); 109195fce210SBarry Smith } 109295fce210SBarry Smith 109395fce210SBarry Smith static PetscErrorCode PetscSFFetchAndOpEnd_Basic(PetscSF sf,MPI_Datatype unit,void *rootdata,const void *leafdata,void *leafupdate,MPI_Op op) 109495fce210SBarry Smith { 109595fce210SBarry Smith PetscSF_Basic *bas = (PetscSF_Basic*)sf->data; 10962a74e5f4SJed Brown void (*FetchAndOp)(PetscInt,PetscInt,const PetscInt*,void*,void*); 109795fce210SBarry Smith PetscErrorCode ierr; 109895fce210SBarry Smith PetscSFBasicPack link; 1099c943f53fSJed Brown PetscInt i,nrootranks,ndrootranks,nleafranks,ndleafranks; 110095fce210SBarry Smith const PetscInt *rootoffset,*leafoffset,*rootloc,*leafloc; 110195fce210SBarry Smith const PetscMPIInt *rootranks,*leafranks; 110295fce210SBarry Smith MPI_Request *rootreqs,*leafreqs; 110395fce210SBarry Smith 110495fce210SBarry Smith PetscFunctionBegin; 110595fce210SBarry Smith ierr = PetscSFBasicGetPackInUse(sf,unit,rootdata,PETSC_OWN_POINTER,&link);CHKERRQ(ierr); 110695fce210SBarry Smith /* This implementation could be changed to unpack as receives arrive, at the cost of non-determinism */ 110795fce210SBarry Smith ierr = PetscSFBasicPackWaitall(sf,link);CHKERRQ(ierr); 1108c943f53fSJed Brown ierr = PetscSFBasicGetRootInfo(sf,&nrootranks,&ndrootranks,&rootranks,&rootoffset,&rootloc);CHKERRQ(ierr); 1109c943f53fSJed Brown ierr = PetscSFBasicGetLeafInfo(sf,&nleafranks,&ndleafranks,&leafranks,&leafoffset,&leafloc);CHKERRQ(ierr); 111095fce210SBarry Smith ierr = PetscSFBasicPackGetReqs(sf,link,&rootreqs,&leafreqs);CHKERRQ(ierr); 111195fce210SBarry Smith /* Post leaf receives */ 1112c943f53fSJed Brown for (i=ndleafranks; i<nleafranks; i++) { 111395fce210SBarry Smith PetscMPIInt n = leafoffset[i+1] - leafoffset[i]; 1114c943f53fSJed Brown ierr = MPI_Irecv(link->leaf[i],n,unit,leafranks[i],bas->tag,PetscObjectComm((PetscObject)sf),&leafreqs[i-ndleafranks]);CHKERRQ(ierr); 111595fce210SBarry Smith } 111695fce210SBarry Smith /* Process local fetch-and-op, post root sends */ 111795fce210SBarry Smith ierr = PetscSFBasicPackGetFetchAndOp(sf,link,op,&FetchAndOp);CHKERRQ(ierr); 111895fce210SBarry Smith for (i=0; i<nrootranks; i++) { 111995fce210SBarry Smith PetscMPIInt n = rootoffset[i+1] - rootoffset[i]; 1120bf39f1bfSJed Brown void *packstart = link->root[i]; 112195fce210SBarry Smith 11222a74e5f4SJed Brown (*FetchAndOp)(n,link->bs,rootloc+rootoffset[i],rootdata,packstart); 1123c943f53fSJed Brown if (i < ndrootranks) continue; /* shared memory */ 1124c943f53fSJed Brown ierr = MPI_Isend(packstart,n,unit,rootranks[i],bas->tag,PetscObjectComm((PetscObject)sf),&rootreqs[i-ndrootranks]);CHKERRQ(ierr); 112595fce210SBarry Smith } 112695fce210SBarry Smith ierr = PetscSFBasicPackWaitall(sf,link);CHKERRQ(ierr); 112795fce210SBarry Smith for (i=0; i<nleafranks; i++) { 112895fce210SBarry Smith PetscMPIInt n = leafoffset[i+1] - leafoffset[i]; 1129bf39f1bfSJed Brown const void *packstart = link->leaf[i]; 11302a74e5f4SJed Brown (*link->UnpackInsert)(n,link->bs,leafloc+leafoffset[i],leafupdate,packstart); 113195fce210SBarry Smith } 113295fce210SBarry Smith ierr = PetscSFBasicReclaimPack(sf,&link);CHKERRQ(ierr); 113395fce210SBarry Smith PetscFunctionReturn(0); 113495fce210SBarry Smith } 113595fce210SBarry Smith 11368750ddebSJunchao Zhang static PetscErrorCode PetscSFGetLeafRanks_Basic(PetscSF sf,PetscInt *niranks,const PetscMPIInt **iranks,const PetscInt **ioffset,const PetscInt **irootloc) 11378750ddebSJunchao Zhang { 11388750ddebSJunchao Zhang PetscSF_Basic *bas = (PetscSF_Basic*)sf->data; 11398750ddebSJunchao Zhang 11408750ddebSJunchao Zhang PetscFunctionBegin; 11418750ddebSJunchao Zhang if (niranks) *niranks = bas->niranks; 11428750ddebSJunchao Zhang if (iranks) *iranks = bas->iranks; 11438750ddebSJunchao Zhang if (ioffset) *ioffset = bas->ioffset; 11448750ddebSJunchao Zhang if (irootloc) *irootloc = bas->irootloc; 11458750ddebSJunchao Zhang PetscFunctionReturn(0); 11468750ddebSJunchao Zhang } 11478750ddebSJunchao Zhang 11488cc058d9SJed Brown PETSC_EXTERN PetscErrorCode PetscSFCreate_Basic(PetscSF sf) 114995fce210SBarry Smith { 115095fce210SBarry Smith PetscSF_Basic *bas = (PetscSF_Basic*)sf->data; 115195fce210SBarry Smith PetscErrorCode ierr; 115295fce210SBarry Smith 115395fce210SBarry Smith PetscFunctionBegin; 115495fce210SBarry Smith sf->ops->SetUp = PetscSFSetUp_Basic; 115595fce210SBarry Smith sf->ops->SetFromOptions = PetscSFSetFromOptions_Basic; 115695fce210SBarry Smith sf->ops->Reset = PetscSFReset_Basic; 115795fce210SBarry Smith sf->ops->Destroy = PetscSFDestroy_Basic; 115895fce210SBarry Smith sf->ops->View = PetscSFView_Basic; 115995fce210SBarry Smith sf->ops->BcastBegin = PetscSFBcastBegin_Basic; 116095fce210SBarry Smith sf->ops->BcastEnd = PetscSFBcastEnd_Basic; 11613482bfa8SJunchao Zhang sf->ops->BcastAndOpBegin = PetscSFBcastAndOpBegin_Basic; 11623482bfa8SJunchao Zhang sf->ops->BcastAndOpEnd = PetscSFBcastAndOpEnd_Basic; 116395fce210SBarry Smith sf->ops->ReduceBegin = PetscSFReduceBegin_Basic; 116495fce210SBarry Smith sf->ops->ReduceEnd = PetscSFReduceEnd_Basic; 116595fce210SBarry Smith sf->ops->FetchAndOpBegin = PetscSFFetchAndOpBegin_Basic; 116695fce210SBarry Smith sf->ops->FetchAndOpEnd = PetscSFFetchAndOpEnd_Basic; 11678750ddebSJunchao Zhang sf->ops->GetLeafRanks = PetscSFGetLeafRanks_Basic; 116895fce210SBarry Smith 1169b00a9115SJed Brown ierr = PetscNewLog(sf,&bas);CHKERRQ(ierr); 117095fce210SBarry Smith sf->data = (void*)bas; 117195fce210SBarry Smith PetscFunctionReturn(0); 117295fce210SBarry Smith } 1173