xref: /petsc/src/vec/is/sf/tutorials/ex1.c (revision dfd57a172ac9fa6c7b5fe6de6ab5df85cefc2996)
1c4762a1bSJed Brown static const char help[] = "Test star forest communication (PetscSF)\n\n";
2c4762a1bSJed Brown 
3c4762a1bSJed Brown /*T
4c4762a1bSJed Brown     Description: A star is a simple tree with one root and zero or more leaves.
5c4762a1bSJed Brown     A star forest is a union of disjoint stars.
6c4762a1bSJed Brown     Many common communication patterns can be expressed as updates of rootdata using leafdata and vice-versa.
7c4762a1bSJed Brown     This example creates a star forest, communicates values using the graph (see options for types of communication), views the graph, then destroys it.
8c4762a1bSJed Brown T*/
9c4762a1bSJed Brown 
10c4762a1bSJed Brown /*
11c4762a1bSJed Brown   Include petscsf.h so we can use PetscSF objects. Note that this automatically
12c4762a1bSJed Brown   includes petscsys.h.
13c4762a1bSJed Brown */
14c4762a1bSJed Brown #include <petscsf.h>
15c4762a1bSJed Brown #include <petscviewer.h>
16c4762a1bSJed Brown 
17c4762a1bSJed Brown /* like PetscSFView() but with alternative array of local indices */
18c4762a1bSJed Brown static PetscErrorCode PetscSFViewCustomLocals_Private(PetscSF sf,const PetscInt locals[],PetscViewer viewer)
19c4762a1bSJed Brown {
20c4762a1bSJed Brown   const PetscSFNode *iremote;
21c4762a1bSJed Brown   PetscInt          i,nroots,nleaves,nranks;
22c4762a1bSJed Brown   PetscMPIInt       rank;
23c4762a1bSJed Brown   PetscErrorCode    ierr;
24c4762a1bSJed Brown 
25c4762a1bSJed Brown   PetscFunctionBeginUser;
26ffc4695bSBarry Smith   ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)sf),&rank);CHKERRMPI(ierr);
27c4762a1bSJed Brown   ierr = PetscSFGetGraph(sf,&nroots,&nleaves,NULL,&iremote);CHKERRQ(ierr);
28c4762a1bSJed Brown   ierr = PetscSFGetRootRanks(sf,&nranks,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
29c4762a1bSJed Brown   ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr);
30c4762a1bSJed Brown   ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr);
31c4762a1bSJed Brown   ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] Number of roots=%D, leaves=%D, remote ranks=%D\n",rank,nroots,nleaves,nranks);CHKERRQ(ierr);
32c4762a1bSJed Brown   for (i=0; i<nleaves; i++) {
33c4762a1bSJed Brown     ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] %D <- (%D,%D)\n",rank,locals[i],iremote[i].rank,iremote[i].index);CHKERRQ(ierr);
34c4762a1bSJed Brown   }
35c4762a1bSJed Brown   ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
36c4762a1bSJed Brown   ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr);
37c4762a1bSJed Brown   ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr);
38c4762a1bSJed Brown   PetscFunctionReturn(0);
39c4762a1bSJed Brown }
40c4762a1bSJed Brown 
41c4762a1bSJed Brown int main(int argc,char **argv)
42c4762a1bSJed Brown {
43c4762a1bSJed Brown   PetscErrorCode ierr;
44c4762a1bSJed Brown   PetscInt       i,nroots,nrootsalloc,nleaves,nleavesalloc,*mine,stride;
45c4762a1bSJed Brown   PetscSFNode    *remote;
46c4762a1bSJed Brown   PetscMPIInt    rank,size;
47c4762a1bSJed Brown   PetscSF        sf;
48c4762a1bSJed Brown   PetscBool      test_all,test_bcast,test_bcastop,test_reduce,test_degree,test_fetchandop,test_gather,test_scatter,test_embed,test_invert,test_sf_distribute,test_char;
49c4762a1bSJed Brown   MPI_Op         mop=MPI_OP_NULL; /* initialize to prevent compiler warnings with cxx_quad build */
50c4762a1bSJed Brown   char           opstring[256];
51c4762a1bSJed Brown   PetscBool      strflg;
52c4762a1bSJed Brown 
53c4762a1bSJed Brown   ierr = PetscInitialize(&argc,&argv,(char*)0,help);if (ierr) return ierr;
54ffc4695bSBarry Smith   ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRMPI(ierr);
55ffc4695bSBarry Smith   ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRMPI(ierr);
56c4762a1bSJed Brown 
57c4762a1bSJed Brown   ierr            = PetscOptionsBegin(PETSC_COMM_WORLD,"","PetscSF Test Options","none");CHKERRQ(ierr);
58c4762a1bSJed Brown   test_all        = PETSC_FALSE;
59c4762a1bSJed Brown   ierr            = PetscOptionsBool("-test_all","Test all SF communications","",test_all,&test_all,NULL);CHKERRQ(ierr);
60c4762a1bSJed Brown   test_bcast      = test_all;
61c4762a1bSJed Brown   ierr            = PetscOptionsBool("-test_bcast","Test broadcast","",test_bcast,&test_bcast,NULL);CHKERRQ(ierr);
62c4762a1bSJed Brown   test_bcastop    = test_all;
63c4762a1bSJed Brown   ierr            = PetscOptionsBool("-test_bcastop","Test broadcast and reduce","",test_bcastop,&test_bcastop,NULL);CHKERRQ(ierr);
64c4762a1bSJed Brown   test_reduce     = test_all;
65c4762a1bSJed Brown   ierr            = PetscOptionsBool("-test_reduce","Test reduction","",test_reduce,&test_reduce,NULL);CHKERRQ(ierr);
66c4762a1bSJed Brown   test_char       = test_all;
67c4762a1bSJed Brown   ierr            = PetscOptionsBool("-test_char","Test signed char, unsigned char, and char","",test_char,&test_char,NULL);CHKERRQ(ierr);
68c4762a1bSJed Brown   mop             = MPI_SUM;
69c4762a1bSJed Brown   ierr            = PetscStrcpy(opstring,"sum");CHKERRQ(ierr);
70589a23caSBarry Smith   ierr            = PetscOptionsString("-test_op","Designate which MPI_Op to use","",opstring,opstring,sizeof(opstring),NULL);CHKERRQ(ierr);
71c4762a1bSJed Brown   ierr = PetscStrcmp("sum",opstring,&strflg);CHKERRQ(ierr);
72c4762a1bSJed Brown   if (strflg) {
73c4762a1bSJed Brown     mop = MPIU_SUM;
74c4762a1bSJed Brown   }
75c4762a1bSJed Brown   ierr = PetscStrcmp("prod",opstring,&strflg);CHKERRQ(ierr);
76c4762a1bSJed Brown   if (strflg) {
77c4762a1bSJed Brown     mop = MPI_PROD;
78c4762a1bSJed Brown   }
79c4762a1bSJed Brown   ierr = PetscStrcmp("max",opstring,&strflg);CHKERRQ(ierr);
80c4762a1bSJed Brown   if (strflg) {
81c4762a1bSJed Brown     mop = MPI_MAX;
82c4762a1bSJed Brown   }
83c4762a1bSJed Brown   ierr = PetscStrcmp("min",opstring,&strflg);CHKERRQ(ierr);
84c4762a1bSJed Brown   if (strflg) {
85c4762a1bSJed Brown     mop = MPI_MIN;
86c4762a1bSJed Brown   }
87c4762a1bSJed Brown   ierr = PetscStrcmp("land",opstring,&strflg);CHKERRQ(ierr);
88c4762a1bSJed Brown   if (strflg) {
89c4762a1bSJed Brown     mop = MPI_LAND;
90c4762a1bSJed Brown   }
91c4762a1bSJed Brown   ierr = PetscStrcmp("band",opstring,&strflg);CHKERRQ(ierr);
92c4762a1bSJed Brown   if (strflg) {
93c4762a1bSJed Brown     mop = MPI_BAND;
94c4762a1bSJed Brown   }
95c4762a1bSJed Brown   ierr = PetscStrcmp("lor",opstring,&strflg);CHKERRQ(ierr);
96c4762a1bSJed Brown   if (strflg) {
97c4762a1bSJed Brown     mop = MPI_LOR;
98c4762a1bSJed Brown   }
99c4762a1bSJed Brown   ierr = PetscStrcmp("bor",opstring,&strflg);CHKERRQ(ierr);
100c4762a1bSJed Brown   if (strflg) {
101c4762a1bSJed Brown     mop = MPI_BOR;
102c4762a1bSJed Brown   }
103c4762a1bSJed Brown   ierr = PetscStrcmp("lxor",opstring,&strflg);CHKERRQ(ierr);
104c4762a1bSJed Brown   if (strflg) {
105c4762a1bSJed Brown     mop = MPI_LXOR;
106c4762a1bSJed Brown   }
107c4762a1bSJed Brown   ierr = PetscStrcmp("bxor",opstring,&strflg);CHKERRQ(ierr);
108c4762a1bSJed Brown   if (strflg) {
109c4762a1bSJed Brown     mop = MPI_BXOR;
110c4762a1bSJed Brown   }
111c4762a1bSJed Brown   test_degree     = test_all;
112c4762a1bSJed Brown   ierr            = PetscOptionsBool("-test_degree","Test computation of vertex degree","",test_degree,&test_degree,NULL);CHKERRQ(ierr);
113c4762a1bSJed Brown   test_fetchandop = test_all;
114c4762a1bSJed Brown   ierr            = PetscOptionsBool("-test_fetchandop","Test atomic Fetch-And-Op","",test_fetchandop,&test_fetchandop,NULL);CHKERRQ(ierr);
115c4762a1bSJed Brown   test_gather     = test_all;
116c4762a1bSJed Brown   ierr            = PetscOptionsBool("-test_gather","Test point gather","",test_gather,&test_gather,NULL);CHKERRQ(ierr);
117c4762a1bSJed Brown   test_scatter    = test_all;
118c4762a1bSJed Brown   ierr            = PetscOptionsBool("-test_scatter","Test point scatter","",test_scatter,&test_scatter,NULL);CHKERRQ(ierr);
119c4762a1bSJed Brown   test_embed      = test_all;
120c4762a1bSJed Brown   ierr            = PetscOptionsBool("-test_embed","Test point embed","",test_embed,&test_embed,NULL);CHKERRQ(ierr);
121c4762a1bSJed Brown   test_invert     = test_all;
122c4762a1bSJed Brown   ierr            = PetscOptionsBool("-test_invert","Test point invert","",test_invert,&test_invert,NULL);CHKERRQ(ierr);
123c4762a1bSJed Brown   stride          = 1;
124c4762a1bSJed Brown   ierr            = PetscOptionsInt("-stride","Stride for leaf and root data","",stride,&stride,NULL);CHKERRQ(ierr);
125c4762a1bSJed Brown   test_sf_distribute = PETSC_FALSE;
126c4762a1bSJed Brown   ierr            = PetscOptionsBool("-test_sf_distribute","Create an SF that 'distributes' to each process, like an alltoall","",test_sf_distribute,&test_sf_distribute,NULL);CHKERRQ(ierr);
127589a23caSBarry Smith   ierr            = PetscOptionsString("-test_op","Designate which MPI_Op to use","",opstring,opstring,sizeof(opstring),NULL);CHKERRQ(ierr);
128c4762a1bSJed Brown   ierr            = PetscOptionsEnd();CHKERRQ(ierr);
129c4762a1bSJed Brown 
130c4762a1bSJed Brown   if (test_sf_distribute) {
131c4762a1bSJed Brown     nroots = size;
132c4762a1bSJed Brown     nrootsalloc = size;
133c4762a1bSJed Brown     nleaves = size;
134c4762a1bSJed Brown     nleavesalloc = size;
135c4762a1bSJed Brown     mine = NULL;
136c4762a1bSJed Brown     ierr = PetscMalloc1(nleaves,&remote);CHKERRQ(ierr);
137c4762a1bSJed Brown     for (i=0; i<size; i++) {
138c4762a1bSJed Brown       remote[i].rank = i;
139c4762a1bSJed Brown       remote[i].index = rank;
140c4762a1bSJed Brown     }
141c4762a1bSJed Brown   } else {
142c4762a1bSJed Brown     nroots       = 2 + (PetscInt)(rank == 0);
143c4762a1bSJed Brown     nrootsalloc  = nroots * stride;
144c4762a1bSJed Brown     nleaves      = 2 + (PetscInt)(rank > 0);
145c4762a1bSJed Brown     nleavesalloc = nleaves * stride;
146c4762a1bSJed Brown     mine         = NULL;
147c4762a1bSJed Brown     if (stride > 1) {
148c4762a1bSJed Brown       PetscInt i;
149c4762a1bSJed Brown 
150c4762a1bSJed Brown       ierr = PetscMalloc1(nleaves,&mine);CHKERRQ(ierr);
151c4762a1bSJed Brown       for (i = 0; i < nleaves; i++) {
152c4762a1bSJed Brown         mine[i] = stride * i;
153c4762a1bSJed Brown       }
154c4762a1bSJed Brown     }
155c4762a1bSJed Brown     ierr = PetscMalloc1(nleaves,&remote);CHKERRQ(ierr);
156c4762a1bSJed Brown     /* Left periodic neighbor */
157c4762a1bSJed Brown     remote[0].rank  = (rank+size-1)%size;
158c4762a1bSJed Brown     remote[0].index = 1 * stride;
159c4762a1bSJed Brown     /* Right periodic neighbor */
160c4762a1bSJed Brown     remote[1].rank  = (rank+1)%size;
161c4762a1bSJed Brown     remote[1].index = 0 * stride;
162c4762a1bSJed Brown     if (rank > 0) {               /* All processes reference rank 0, index 1 */
163c4762a1bSJed Brown       remote[2].rank  = 0;
164c4762a1bSJed Brown       remote[2].index = 2 * stride;
165c4762a1bSJed Brown     }
166c4762a1bSJed Brown   }
167c4762a1bSJed Brown 
168c4762a1bSJed Brown   /* Create a star forest for communication. In this example, the leaf space is dense, so we pass NULL. */
169c4762a1bSJed Brown   ierr = PetscSFCreate(PETSC_COMM_WORLD,&sf);CHKERRQ(ierr);
170c4762a1bSJed Brown   ierr = PetscSFSetFromOptions(sf);CHKERRQ(ierr);
171c4762a1bSJed Brown   ierr = PetscSFSetGraph(sf,nrootsalloc,nleaves,mine,PETSC_OWN_POINTER,remote,PETSC_OWN_POINTER);CHKERRQ(ierr);
172c4762a1bSJed Brown   ierr = PetscSFSetUp(sf);CHKERRQ(ierr);
173c4762a1bSJed Brown 
174c4762a1bSJed Brown   /* View graph, mostly useful for debugging purposes. */
175c4762a1bSJed Brown   ierr = PetscViewerPushFormat(PETSC_VIEWER_STDOUT_WORLD,PETSC_VIEWER_ASCII_INFO_DETAIL);CHKERRQ(ierr);
176c4762a1bSJed Brown   ierr = PetscSFView(sf,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
177c4762a1bSJed Brown   ierr = PetscViewerPopFormat(PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
178c4762a1bSJed Brown 
179c4762a1bSJed Brown   if (test_bcast) {             /* broadcast rootdata into leafdata */
180c4762a1bSJed Brown     PetscInt *rootdata,*leafdata;
1812d4ee042Sprj-     /* Allocate space for send and receive buffers. This example communicates PetscInt, but other types, including
182c4762a1bSJed Brown      * user-defined structures, could also be used. */
183c4762a1bSJed Brown     ierr = PetscMalloc2(nrootsalloc,&rootdata,nleavesalloc,&leafdata);CHKERRQ(ierr);
184c4762a1bSJed Brown     /* Set rootdata buffer to be broadcast */
185c4762a1bSJed Brown     for (i=0; i<nrootsalloc; i++) rootdata[i] = -1;
186c4762a1bSJed Brown     for (i=0; i<nroots; i++) rootdata[i*stride] = 100*(rank+1) + i;
187c4762a1bSJed Brown     /* Initialize local buffer, these values are never used. */
188c4762a1bSJed Brown     for (i=0; i<nleavesalloc; i++) leafdata[i] = -1;
189c4762a1bSJed Brown     /* Broadcast entries from rootdata to leafdata. Computation or other communication can be performed between the begin and end calls. */
190ad227feaSJunchao Zhang     ierr = PetscSFBcastBegin(sf,MPIU_INT,rootdata,leafdata,MPI_REPLACE);CHKERRQ(ierr);
191ad227feaSJunchao Zhang     ierr = PetscSFBcastEnd(sf,MPIU_INT,rootdata,leafdata,MPI_REPLACE);CHKERRQ(ierr);
192c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Bcast Rootdata\n");CHKERRQ(ierr);
193c4762a1bSJed Brown     ierr = PetscIntView(nrootsalloc,rootdata,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
194c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Bcast Leafdata\n");CHKERRQ(ierr);
195c4762a1bSJed Brown     ierr = PetscIntView(nleavesalloc,leafdata,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
196c4762a1bSJed Brown     ierr = PetscFree2(rootdata,leafdata);CHKERRQ(ierr);
197c4762a1bSJed Brown   }
198c4762a1bSJed Brown 
199c4762a1bSJed Brown   if (test_bcast && test_char) { /* Bcast with char */
200c4762a1bSJed Brown     PetscInt len;
201c4762a1bSJed Brown     char buf[256];
202c4762a1bSJed Brown     char *rootdata,*leafdata;
203c4762a1bSJed Brown     ierr = PetscMalloc2(nrootsalloc,&rootdata,nleavesalloc,&leafdata);CHKERRQ(ierr);
204c4762a1bSJed Brown     /* Set rootdata buffer to be broadcast */
205c4762a1bSJed Brown     for (i=0; i<nrootsalloc; i++) rootdata[i] = '*';
206c4762a1bSJed Brown     for (i=0; i<nroots; i++) rootdata[i*stride] = 'A' + rank*3 + i; /* rank is very small, so it is fine to compute a char */
207c4762a1bSJed Brown     /* Initialize local buffer, these values are never used. */
208c4762a1bSJed Brown     for (i=0; i<nleavesalloc; i++) leafdata[i] = '?';
209c4762a1bSJed Brown 
210ad227feaSJunchao Zhang     ierr = PetscSFBcastBegin(sf,MPI_CHAR,rootdata,leafdata,MPI_REPLACE);CHKERRQ(ierr);
211ad227feaSJunchao Zhang     ierr = PetscSFBcastEnd(sf,MPI_CHAR,rootdata,leafdata,MPI_REPLACE);CHKERRQ(ierr);
212c4762a1bSJed Brown 
213c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Bcast Rootdata in type of char\n");CHKERRQ(ierr);
214c4762a1bSJed Brown     len  = 0; ierr = PetscSNPrintf(buf,256,"%4d:",rank);CHKERRQ(ierr); len += 5;
215c4762a1bSJed Brown     for (i=0; i<nrootsalloc; i++) {ierr = PetscSNPrintf(buf+len,256-len,"%5c",rootdata[i]);CHKERRQ(ierr); len += 5;}
216c4762a1bSJed Brown     ierr = PetscSynchronizedPrintf(PETSC_COMM_WORLD,"%s\n",buf);CHKERRQ(ierr);
217c4762a1bSJed Brown     ierr = PetscSynchronizedFlush(PETSC_COMM_WORLD,PETSC_STDOUT);CHKERRQ(ierr);
218c4762a1bSJed Brown 
219c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Bcast Leafdata in type of char\n");CHKERRQ(ierr);
220c4762a1bSJed Brown     len = 0; ierr = PetscSNPrintf(buf,256,"%4d:",rank);CHKERRQ(ierr); len += 5;
221c4762a1bSJed Brown     for (i=0; i<nleavesalloc; i++) {ierr = PetscSNPrintf(buf+len,256-len,"%5c",leafdata[i]);CHKERRQ(ierr); len += 5;}
222c4762a1bSJed Brown     ierr = PetscSynchronizedPrintf(PETSC_COMM_WORLD,"%s\n",buf);CHKERRQ(ierr);
223c4762a1bSJed Brown     ierr = PetscSynchronizedFlush(PETSC_COMM_WORLD,PETSC_STDOUT);CHKERRQ(ierr);
224c4762a1bSJed Brown 
225c4762a1bSJed Brown     ierr = PetscFree2(rootdata,leafdata);CHKERRQ(ierr);
226c4762a1bSJed Brown   }
227c4762a1bSJed Brown 
228c4762a1bSJed Brown   if (test_bcastop) {         /* Reduce rootdata into leafdata */
229c4762a1bSJed Brown     PetscInt *rootdata,*leafdata;
230c4762a1bSJed Brown     /* Allocate space for send and receive buffers. This example communicates PetscInt, but other types, including
231c4762a1bSJed Brown      * user-defined structures, could also be used. */
232c4762a1bSJed Brown     ierr = PetscMalloc2(nrootsalloc,&rootdata,nleavesalloc,&leafdata);CHKERRQ(ierr);
233c4762a1bSJed Brown     /* Set rootdata buffer to be broadcast */
234c4762a1bSJed Brown     for (i=0; i<nrootsalloc; i++) rootdata[i] = -1;
235c4762a1bSJed Brown     for (i=0; i<nroots; i++) rootdata[i*stride] = 100*(rank+1) + i;
236c4762a1bSJed Brown     /* Set leaf values to reduce with */
237c4762a1bSJed Brown     for (i=0; i<nleavesalloc; i++) leafdata[i] = -10*(rank+1) - i;
238c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Pre-BcastAndOp Leafdata\n");CHKERRQ(ierr);
239c4762a1bSJed Brown     ierr = PetscIntView(nleavesalloc,leafdata,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
240c4762a1bSJed Brown     /* Broadcast entries from rootdata to leafdata. Computation or other communication can be performed between the begin and end calls. */
241ad227feaSJunchao Zhang     ierr = PetscSFBcastBegin(sf,MPIU_INT,rootdata,leafdata,mop);CHKERRQ(ierr);
242ad227feaSJunchao Zhang     ierr = PetscSFBcastEnd(sf,MPIU_INT,rootdata,leafdata,mop);CHKERRQ(ierr);
243c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## BcastAndOp Rootdata\n");CHKERRQ(ierr);
244c4762a1bSJed Brown     ierr = PetscIntView(nrootsalloc,rootdata,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
245c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## BcastAndOp Leafdata\n");CHKERRQ(ierr);
246c4762a1bSJed Brown     ierr = PetscIntView(nleavesalloc,leafdata,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
247c4762a1bSJed Brown     ierr = PetscFree2(rootdata,leafdata);CHKERRQ(ierr);
248c4762a1bSJed Brown   }
249c4762a1bSJed Brown 
250c4762a1bSJed Brown   if (test_reduce) {            /* Reduce leafdata into rootdata */
251c4762a1bSJed Brown     PetscInt *rootdata,*leafdata;
252c4762a1bSJed Brown     ierr = PetscMalloc2(nrootsalloc,&rootdata,nleavesalloc,&leafdata);CHKERRQ(ierr);
253c4762a1bSJed Brown     /* Initialize rootdata buffer in which the result of the reduction will appear. */
254c4762a1bSJed Brown     for (i=0; i<nrootsalloc; i++) rootdata[i] = -1;
255c4762a1bSJed Brown     for (i=0; i<nroots; i++) rootdata[i*stride] = 100*(rank+1) + i;
256c4762a1bSJed Brown     /* Set leaf values to reduce. */
257c4762a1bSJed Brown     for (i=0; i<nleavesalloc; i++) leafdata[i] = -1;
258c4762a1bSJed Brown     for (i=0; i<nleaves; i++) leafdata[i*stride] = 1000*(rank+1) + 10*i;
259c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Pre-Reduce Rootdata\n");CHKERRQ(ierr);
260c4762a1bSJed Brown     ierr = PetscIntView(nrootsalloc,rootdata,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
261c4762a1bSJed Brown     /* Perform reduction. Computation or other communication can be performed between the begin and end calls.
262c4762a1bSJed Brown      * This example sums the values, but other MPI_Ops can be used (e.g MPI_MAX, MPI_PROD). */
263c4762a1bSJed Brown     ierr = PetscSFReduceBegin(sf,MPIU_INT,leafdata,rootdata,mop);CHKERRQ(ierr);
264c4762a1bSJed Brown     ierr = PetscSFReduceEnd(sf,MPIU_INT,leafdata,rootdata,mop);CHKERRQ(ierr);
265c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Reduce Leafdata\n");CHKERRQ(ierr);
266c4762a1bSJed Brown     ierr = PetscIntView(nleavesalloc,leafdata,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
267c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Reduce Rootdata\n");CHKERRQ(ierr);
268c4762a1bSJed Brown     ierr = PetscIntView(nrootsalloc,rootdata,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
269c4762a1bSJed Brown     ierr = PetscFree2(rootdata,leafdata);CHKERRQ(ierr);
270c4762a1bSJed Brown   }
271c4762a1bSJed Brown 
272c4762a1bSJed Brown   if (test_reduce && test_char) { /* Reduce with signed char */
273c4762a1bSJed Brown     PetscInt len;
274c4762a1bSJed Brown     char buf[256];
275c4762a1bSJed Brown     signed char *rootdata,*leafdata;
276c4762a1bSJed Brown     ierr = PetscMalloc2(nrootsalloc,&rootdata,nleavesalloc,&leafdata);CHKERRQ(ierr);
277c4762a1bSJed Brown     /* Initialize rootdata buffer in which the result of the reduction will appear. */
278c4762a1bSJed Brown     for (i=0; i<nrootsalloc; i++) rootdata[i] = -1;
279c4762a1bSJed Brown     for (i=0; i<nroots; i++) rootdata[i*stride] = 10*(rank+1) + i;
280c4762a1bSJed Brown     /* Set leaf values to reduce. */
281c4762a1bSJed Brown     for (i=0; i<nleavesalloc; i++) leafdata[i] = -1;
282c4762a1bSJed Brown     for (i=0; i<nleaves; i++) leafdata[i*stride] = 50*(rank+1) + 10*i;
283c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Pre-Reduce Rootdata in type of signed char\n");CHKERRQ(ierr);
284c4762a1bSJed Brown 
285c4762a1bSJed Brown     len = 0; ierr = PetscSNPrintf(buf,256,"%4d:",rank);CHKERRQ(ierr); len += 5;
286c4762a1bSJed Brown     for (i=0; i<nrootsalloc; i++) {ierr = PetscSNPrintf(buf+len,256-len,"%5d",rootdata[i]);CHKERRQ(ierr); len += 5;}
287c4762a1bSJed Brown     ierr = PetscSynchronizedPrintf(PETSC_COMM_WORLD,"%s\n",buf);CHKERRQ(ierr);
288c4762a1bSJed Brown     ierr = PetscSynchronizedFlush(PETSC_COMM_WORLD,PETSC_STDOUT);CHKERRQ(ierr);
289c4762a1bSJed Brown 
290c4762a1bSJed Brown     /* Using MPI_CHAR should trigger an error since MPI standard does not support reduction on MPI_CHAR.
291c4762a1bSJed Brown        Testing with -test_op max, one can see the sign does take effect in MPI_MAX.
292c4762a1bSJed Brown      */
293c4762a1bSJed Brown     ierr = PetscSFReduceBegin(sf,MPI_SIGNED_CHAR,leafdata,rootdata,mop);CHKERRQ(ierr);
294c4762a1bSJed Brown     ierr = PetscSFReduceEnd(sf,MPI_SIGNED_CHAR,leafdata,rootdata,mop);CHKERRQ(ierr);
295c4762a1bSJed Brown 
296c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Reduce Leafdata in type of signed char\n");CHKERRQ(ierr);
297c4762a1bSJed Brown     len  = 0; ierr = PetscSNPrintf(buf,256,"%4d:",rank);CHKERRQ(ierr); len += 5;
298c4762a1bSJed Brown     for (i=0; i<nleavesalloc; i++) {ierr = PetscSNPrintf(buf+len,256-len,"%5d",leafdata[i]);CHKERRQ(ierr); len += 5;}
299c4762a1bSJed Brown     ierr = PetscSynchronizedPrintf(PETSC_COMM_WORLD,"%s\n",buf);CHKERRQ(ierr);
300c4762a1bSJed Brown     ierr = PetscSynchronizedFlush(PETSC_COMM_WORLD,PETSC_STDOUT);CHKERRQ(ierr);
301c4762a1bSJed Brown 
302c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Reduce Rootdata in type of signed char\n");CHKERRQ(ierr);
303c4762a1bSJed Brown     len = 0; ierr = PetscSNPrintf(buf,256,"%4d:",rank);CHKERRQ(ierr); len += 5;
304c4762a1bSJed Brown     for (i=0; i<nrootsalloc; i++) {ierr = PetscSNPrintf(buf+len,256-len,"%5d",rootdata[i]);CHKERRQ(ierr); len += 5;}
305c4762a1bSJed Brown     ierr = PetscSynchronizedPrintf(PETSC_COMM_WORLD,"%s\n",buf);CHKERRQ(ierr);
306c4762a1bSJed Brown     ierr = PetscSynchronizedFlush(PETSC_COMM_WORLD,PETSC_STDOUT);CHKERRQ(ierr);
307c4762a1bSJed Brown 
308c4762a1bSJed Brown     ierr = PetscFree2(rootdata,leafdata);CHKERRQ(ierr);
309c4762a1bSJed Brown   }
310c4762a1bSJed Brown 
311c4762a1bSJed Brown   if (test_reduce && test_char) { /* Reduce with unsigned char */
312c4762a1bSJed Brown     PetscInt len;
313c4762a1bSJed Brown     char buf[256];
314c4762a1bSJed Brown     unsigned char *rootdata,*leafdata;
315c4762a1bSJed Brown     ierr = PetscMalloc2(nrootsalloc,&rootdata,nleavesalloc,&leafdata);CHKERRQ(ierr);
316c4762a1bSJed Brown     /* Initialize rootdata buffer in which the result of the reduction will appear. */
317c4762a1bSJed Brown     for (i=0; i<nrootsalloc; i++) rootdata[i] = -1;
318c4762a1bSJed Brown     for (i=0; i<nroots; i++) rootdata[i*stride] = 10*(rank+1) + i;
319c4762a1bSJed Brown     /* Set leaf values to reduce. */
320c4762a1bSJed Brown     for (i=0; i<nleavesalloc; i++) leafdata[i] = -1;
321c4762a1bSJed Brown     for (i=0; i<nleaves; i++) leafdata[i*stride] = 50*(rank+1) + 10*i;
322c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Pre-Reduce Rootdata in type of unsigned char\n");CHKERRQ(ierr);
323c4762a1bSJed Brown 
324c4762a1bSJed Brown     len = 0; ierr = PetscSNPrintf(buf,256,"%4d:",rank);CHKERRQ(ierr); len += 5;
325c4762a1bSJed Brown     for (i=0; i<nrootsalloc; i++) {ierr = PetscSNPrintf(buf+len,256-len,"%5u",rootdata[i]);CHKERRQ(ierr); len += 5;}
326c4762a1bSJed Brown     ierr = PetscSynchronizedPrintf(PETSC_COMM_WORLD,"%s\n",buf);CHKERRQ(ierr);
327c4762a1bSJed Brown     ierr = PetscSynchronizedFlush(PETSC_COMM_WORLD,PETSC_STDOUT);CHKERRQ(ierr);
328c4762a1bSJed Brown 
329c4762a1bSJed Brown     /* Using MPI_CHAR should trigger an error since MPI standard does not support reduction on MPI_CHAR.
330c4762a1bSJed Brown        Testing with -test_op max, one can see the sign does take effect in MPI_MAX.
331c4762a1bSJed Brown      */
332c4762a1bSJed Brown     ierr = PetscSFReduceBegin(sf,MPI_UNSIGNED_CHAR,leafdata,rootdata,mop);CHKERRQ(ierr);
333c4762a1bSJed Brown     ierr = PetscSFReduceEnd(sf,MPI_UNSIGNED_CHAR,leafdata,rootdata,mop);CHKERRQ(ierr);
334c4762a1bSJed Brown 
335c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Reduce Leafdata in type of unsigned char\n");CHKERRQ(ierr);
336c4762a1bSJed Brown     len  = 0; ierr = PetscSNPrintf(buf,256,"%4d:",rank);CHKERRQ(ierr); len += 5;
337c4762a1bSJed Brown     for (i=0; i<nleavesalloc; i++) {ierr = PetscSNPrintf(buf+len,256-len,"%5u",leafdata[i]);CHKERRQ(ierr); len += 5;}
338c4762a1bSJed Brown     ierr = PetscSynchronizedPrintf(PETSC_COMM_WORLD,"%s\n",buf);CHKERRQ(ierr);
339c4762a1bSJed Brown     ierr = PetscSynchronizedFlush(PETSC_COMM_WORLD,PETSC_STDOUT);CHKERRQ(ierr);
340c4762a1bSJed Brown 
341c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Reduce Rootdata in type of unsigned char\n");CHKERRQ(ierr);
342c4762a1bSJed Brown     len = 0; ierr = PetscSNPrintf(buf,256,"%4d:",rank);CHKERRQ(ierr); len += 5;
343c4762a1bSJed Brown     for (i=0; i<nrootsalloc; i++) {ierr = PetscSNPrintf(buf+len,256-len,"%5u",rootdata[i]);CHKERRQ(ierr); len += 5;}
344c4762a1bSJed Brown     ierr = PetscSynchronizedPrintf(PETSC_COMM_WORLD,"%s\n",buf);CHKERRQ(ierr);
345c4762a1bSJed Brown     ierr = PetscSynchronizedFlush(PETSC_COMM_WORLD,PETSC_STDOUT);CHKERRQ(ierr);
346c4762a1bSJed Brown 
347c4762a1bSJed Brown     ierr = PetscFree2(rootdata,leafdata);CHKERRQ(ierr);
348c4762a1bSJed Brown   }
349c4762a1bSJed Brown 
350c4762a1bSJed Brown   if (test_degree) {
351c4762a1bSJed Brown     const PetscInt *degree;
352c4762a1bSJed Brown     ierr = PetscSFComputeDegreeBegin(sf,&degree);CHKERRQ(ierr);
353c4762a1bSJed Brown     ierr = PetscSFComputeDegreeEnd(sf,&degree);CHKERRQ(ierr);
354c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Root degrees\n");CHKERRQ(ierr);
355c4762a1bSJed Brown     ierr = PetscIntView(nrootsalloc,degree,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
356c4762a1bSJed Brown   }
357c4762a1bSJed Brown 
358c4762a1bSJed Brown   if (test_fetchandop) {
359c4762a1bSJed Brown     /* Cannot use text compare here because token ordering is not deterministic */
360c4762a1bSJed Brown     PetscInt *leafdata,*leafupdate,*rootdata;
361c4762a1bSJed Brown     ierr = PetscMalloc3(nleavesalloc,&leafdata,nleavesalloc,&leafupdate,nrootsalloc,&rootdata);CHKERRQ(ierr);
362c4762a1bSJed Brown     for (i=0; i<nleavesalloc; i++) leafdata[i] = -1;
363c4762a1bSJed Brown     for (i=0; i<nleaves; i++) leafdata[i*stride] = 1;
364c4762a1bSJed Brown     for (i=0; i<nrootsalloc; i++) rootdata[i] = -1;
365c4762a1bSJed Brown     for (i=0; i<nroots; i++) rootdata[i*stride] = 0;
366c4762a1bSJed Brown     ierr = PetscSFFetchAndOpBegin(sf,MPIU_INT,rootdata,leafdata,leafupdate,mop);CHKERRQ(ierr);
367c4762a1bSJed Brown     ierr = PetscSFFetchAndOpEnd(sf,MPIU_INT,rootdata,leafdata,leafupdate,mop);CHKERRQ(ierr);
368c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Rootdata (sum of 1 from each leaf)\n");CHKERRQ(ierr);
369c4762a1bSJed Brown     ierr = PetscIntView(nrootsalloc,rootdata,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
370c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Leafupdate (value at roots prior to my atomic update)\n");CHKERRQ(ierr);
371c4762a1bSJed Brown     ierr = PetscIntView(nleavesalloc,leafupdate,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
372c4762a1bSJed Brown     ierr = PetscFree3(leafdata,leafupdate,rootdata);CHKERRQ(ierr);
373c4762a1bSJed Brown   }
374c4762a1bSJed Brown 
375c4762a1bSJed Brown   if (test_gather) {
376c4762a1bSJed Brown     const PetscInt *degree;
377c4762a1bSJed Brown     PetscInt       inedges,*indata,*outdata;
378c4762a1bSJed Brown     ierr = PetscSFComputeDegreeBegin(sf,&degree);CHKERRQ(ierr);
379c4762a1bSJed Brown     ierr = PetscSFComputeDegreeEnd(sf,&degree);CHKERRQ(ierr);
380c4762a1bSJed Brown     for (i=0,inedges=0; i<nrootsalloc; i++) inedges += degree[i];
381c4762a1bSJed Brown     ierr = PetscMalloc2(inedges,&indata,nleavesalloc,&outdata);CHKERRQ(ierr);
382c4762a1bSJed Brown     for (i=0; i<nleavesalloc; i++) outdata[i] = -1;
383c4762a1bSJed Brown     for (i=0; i<nleaves; i++) outdata[i*stride] = 1000*(rank+1) + i;
384c4762a1bSJed Brown     ierr = PetscSFGatherBegin(sf,MPIU_INT,outdata,indata);CHKERRQ(ierr);
385c4762a1bSJed Brown     ierr = PetscSFGatherEnd(sf,MPIU_INT,outdata,indata);CHKERRQ(ierr);
386c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Gathered data at multi-roots from leaves\n");CHKERRQ(ierr);
387c4762a1bSJed Brown     ierr = PetscIntView(inedges,indata,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
388c4762a1bSJed Brown     ierr = PetscFree2(indata,outdata);CHKERRQ(ierr);
389c4762a1bSJed Brown   }
390c4762a1bSJed Brown 
391c4762a1bSJed Brown   if (test_scatter) {
392c4762a1bSJed Brown     const PetscInt *degree;
393c4762a1bSJed Brown     PetscInt       j,count,inedges,*indata,*outdata;
394c4762a1bSJed Brown     ierr = PetscSFComputeDegreeBegin(sf,&degree);CHKERRQ(ierr);
395c4762a1bSJed Brown     ierr = PetscSFComputeDegreeEnd(sf,&degree);CHKERRQ(ierr);
396c4762a1bSJed Brown     for (i=0,inedges=0; i<nrootsalloc; i++) inedges += degree[i];
397c4762a1bSJed Brown     ierr = PetscMalloc2(inedges,&indata,nleavesalloc,&outdata);CHKERRQ(ierr);
398c4762a1bSJed Brown     for (i=0; i<nleavesalloc; i++) outdata[i] = -1;
399c4762a1bSJed Brown     for (i=0,count=0; i<nrootsalloc; i++) {
400c4762a1bSJed Brown       for (j=0; j<degree[i]; j++) indata[count++] = 1000*(rank+1) + 100*i + j;
401c4762a1bSJed Brown     }
402c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Data at multi-roots, to scatter to leaves\n");CHKERRQ(ierr);
403c4762a1bSJed Brown     ierr = PetscIntView(inedges,indata,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
404c4762a1bSJed Brown 
405c4762a1bSJed Brown     ierr = PetscSFScatterBegin(sf,MPIU_INT,indata,outdata);CHKERRQ(ierr);
406c4762a1bSJed Brown     ierr = PetscSFScatterEnd(sf,MPIU_INT,indata,outdata);CHKERRQ(ierr);
407c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Scattered data at leaves\n");CHKERRQ(ierr);
408c4762a1bSJed Brown     ierr = PetscIntView(nleavesalloc,outdata,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
409c4762a1bSJed Brown     ierr = PetscFree2(indata,outdata);CHKERRQ(ierr);
410c4762a1bSJed Brown   }
411c4762a1bSJed Brown 
412c4762a1bSJed Brown   if (test_embed) {
413c4762a1bSJed Brown     const PetscInt nroots = 1 + (PetscInt) !rank;
414c4762a1bSJed Brown     PetscInt       selected[2];
415c4762a1bSJed Brown     PetscSF        esf;
416c4762a1bSJed Brown 
417c4762a1bSJed Brown     selected[0] = stride;
418c4762a1bSJed Brown     selected[1] = 2*stride;
41972502a1fSJunchao Zhang     ierr = PetscSFCreateEmbeddedRootSF(sf,nroots,selected,&esf);CHKERRQ(ierr);
420c4762a1bSJed Brown     ierr = PetscSFSetUp(esf);CHKERRQ(ierr);
421c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Embedded PetscSF\n");CHKERRQ(ierr);
422c4762a1bSJed Brown     ierr = PetscViewerPushFormat(PETSC_VIEWER_STDOUT_WORLD,PETSC_VIEWER_ASCII_INFO_DETAIL);CHKERRQ(ierr);
423c4762a1bSJed Brown     ierr = PetscSFView(esf,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
424c4762a1bSJed Brown     ierr = PetscViewerPopFormat(PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
425c4762a1bSJed Brown     ierr = PetscSFDestroy(&esf);CHKERRQ(ierr);
426c4762a1bSJed Brown   }
427c4762a1bSJed Brown 
428c4762a1bSJed Brown   if (test_invert) {
429c4762a1bSJed Brown     const PetscInt *degree;
430c4762a1bSJed Brown     PetscInt *mRootsOrigNumbering;
431c4762a1bSJed Brown     PetscInt inedges;
432c4762a1bSJed Brown     PetscSF msf,imsf;
433c4762a1bSJed Brown 
434c4762a1bSJed Brown     ierr = PetscSFGetMultiSF(sf,&msf);CHKERRQ(ierr);
435c4762a1bSJed Brown     ierr = PetscSFCreateInverseSF(msf,&imsf);CHKERRQ(ierr);
436c4762a1bSJed Brown     ierr = PetscSFSetUp(msf);CHKERRQ(ierr);
437c4762a1bSJed Brown     ierr = PetscSFSetUp(imsf);CHKERRQ(ierr);
438c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Multi-SF\n");CHKERRQ(ierr);
439c4762a1bSJed Brown     ierr = PetscSFView(msf,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
440c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Multi-SF roots indices in original SF roots numbering\n");CHKERRQ(ierr);
441c4762a1bSJed Brown     ierr = PetscSFComputeDegreeBegin(sf,&degree);CHKERRQ(ierr);
442c4762a1bSJed Brown     ierr = PetscSFComputeDegreeEnd(sf,&degree);CHKERRQ(ierr);
443c4762a1bSJed Brown     ierr = PetscSFComputeMultiRootOriginalNumbering(sf,degree,&inedges,&mRootsOrigNumbering);CHKERRQ(ierr);
444c4762a1bSJed Brown     ierr = PetscIntView(inedges,mRootsOrigNumbering,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
445c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Inverse of Multi-SF\n");CHKERRQ(ierr);
446c4762a1bSJed Brown     ierr = PetscSFView(imsf,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
447c4762a1bSJed Brown     ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD,"## Inverse of Multi-SF, original numbering\n");CHKERRQ(ierr);
448c4762a1bSJed Brown     ierr = PetscSFViewCustomLocals_Private(imsf,mRootsOrigNumbering,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
449c4762a1bSJed Brown     ierr = PetscSFDestroy(&imsf);CHKERRQ(ierr);
450c4762a1bSJed Brown     ierr = PetscFree(mRootsOrigNumbering);CHKERRQ(ierr);
451c4762a1bSJed Brown   }
452c4762a1bSJed Brown 
453c4762a1bSJed Brown   /* Clean storage for star forest. */
454c4762a1bSJed Brown   ierr = PetscSFDestroy(&sf);CHKERRQ(ierr);
455c4762a1bSJed Brown   ierr = PetscFinalize();
456c4762a1bSJed Brown   return ierr;
457c4762a1bSJed Brown }
458c4762a1bSJed Brown 
459c4762a1bSJed Brown /*TEST
460c4762a1bSJed Brown 
461c4762a1bSJed Brown    test:
462c4762a1bSJed Brown       nsize: 4
463c4762a1bSJed Brown       filter: grep -v "type" | grep -v "sort"
464c4762a1bSJed Brown       args: -test_bcast -sf_type window -sf_window_sync {{fence active lock}} -sf_window_flavor {{create dynamic allocate}}
465*dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPI_ONE_SIDED) defined(PETSC_HAVE_MPI_FEATURE_DYNAMIC_WINDOW)
466c4762a1bSJed Brown 
467c4762a1bSJed Brown    test:
468c4762a1bSJed Brown       suffix: 2
469c4762a1bSJed Brown       nsize: 4
470c4762a1bSJed Brown       filter: grep -v "type" | grep -v "sort"
471c4762a1bSJed Brown       args: -test_reduce -sf_type window -sf_window_sync {{fence active lock}} -sf_window_flavor {{create dynamic allocate}}
472*dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPI_ONE_SIDED) defined(PETSC_HAVE_MPI_FEATURE_DYNAMIC_WINDOW)
473c4762a1bSJed Brown 
474c4762a1bSJed Brown    test:
475c4762a1bSJed Brown       suffix: 2_basic
476c4762a1bSJed Brown       nsize: 4
477c4762a1bSJed Brown       args: -test_reduce -sf_type basic
478c4762a1bSJed Brown 
479c4762a1bSJed Brown    test:
480c4762a1bSJed Brown       suffix: 3
481c4762a1bSJed Brown       nsize: 4
482c4762a1bSJed Brown       filter: grep -v "type" | grep -v "sort"
483c4762a1bSJed Brown       args: -test_degree -sf_type window -sf_window_sync {{fence active lock}} -sf_window_flavor {{create dynamic allocate}}
484*dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPI_ONE_SIDED) defined(PETSC_HAVE_MPI_FEATURE_DYNAMIC_WINDOW)
485c4762a1bSJed Brown 
486c4762a1bSJed Brown    test:
487c4762a1bSJed Brown       suffix: 3_basic
488c4762a1bSJed Brown       nsize: 4
489c4762a1bSJed Brown       args: -test_degree -sf_type basic
490c4762a1bSJed Brown 
491c4762a1bSJed Brown    test:
492c4762a1bSJed Brown       suffix: 4
493c4762a1bSJed Brown       nsize: 4
494c4762a1bSJed Brown       filter: grep -v "type" | grep -v "sort"
495c4762a1bSJed Brown       args: -test_gather -sf_type window -sf_window_sync {{fence active lock}} -sf_window_flavor {{create dynamic allocate}}
496*dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPI_ONE_SIDED) defined(PETSC_HAVE_MPI_FEATURE_DYNAMIC_WINDOW)
497c4762a1bSJed Brown 
498c4762a1bSJed Brown    test:
499c4762a1bSJed Brown       suffix: 4_basic
500c4762a1bSJed Brown       nsize: 4
501c4762a1bSJed Brown       args: -test_gather -sf_type basic
502c4762a1bSJed Brown 
503c4762a1bSJed Brown    test:
504c4762a1bSJed Brown       suffix: 4_stride
505c4762a1bSJed Brown       nsize: 4
506c4762a1bSJed Brown       args: -test_gather -sf_type basic -stride 2
507c4762a1bSJed Brown 
508c4762a1bSJed Brown    test:
509c4762a1bSJed Brown       suffix: 5
510c4762a1bSJed Brown       nsize: 4
511c4762a1bSJed Brown       filter: grep -v "type" | grep -v "sort"
512c4762a1bSJed Brown       args: -test_scatter -sf_type window -sf_window_sync {{fence active lock}} -sf_window_flavor {{create dynamic allocate}}
513*dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPI_ONE_SIDED) defined(PETSC_HAVE_MPI_FEATURE_DYNAMIC_WINDOW)
514c4762a1bSJed Brown 
515c4762a1bSJed Brown    test:
516c4762a1bSJed Brown       suffix: 5_basic
517c4762a1bSJed Brown       nsize: 4
518c4762a1bSJed Brown       args: -test_scatter -sf_type basic
519c4762a1bSJed Brown 
520c4762a1bSJed Brown    test:
521c4762a1bSJed Brown       suffix: 5_stride
522c4762a1bSJed Brown       nsize: 4
523c4762a1bSJed Brown       args: -test_scatter -sf_type basic -stride 2
524c4762a1bSJed Brown 
525c4762a1bSJed Brown    test:
526c4762a1bSJed Brown       suffix: 6
527c4762a1bSJed Brown       nsize: 4
528c4762a1bSJed Brown       filter: grep -v "type" | grep -v "sort"
529c20d7725SJed Brown       # No -sf_window_flavor dynamic due to bug https://gitlab.com/petsc/petsc/issues/555
530c20d7725SJed Brown       args: -test_embed -sf_type window -sf_window_sync {{fence active lock}} -sf_window_flavor {{create allocate}}
531*dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPI_ONE_SIDED) defined(PETSC_HAVE_MPI_FEATURE_DYNAMIC_WINDOW)
532c4762a1bSJed Brown 
533c4762a1bSJed Brown    test:
534c4762a1bSJed Brown       suffix: 6_basic
535c4762a1bSJed Brown       nsize: 4
536c4762a1bSJed Brown       args: -test_embed -sf_type basic
537c4762a1bSJed Brown 
538c4762a1bSJed Brown    test:
539c4762a1bSJed Brown       suffix: 7
540c4762a1bSJed Brown       nsize: 4
541c4762a1bSJed Brown       filter: grep -v "type" | grep -v "sort"
542c4762a1bSJed Brown       args: -test_invert -sf_type window -sf_window_sync {{fence active lock}} -sf_window_flavor {{create dynamic allocate}}
543*dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPI_ONE_SIDED) defined(PETSC_HAVE_MPI_FEATURE_DYNAMIC_WINDOW)
544c4762a1bSJed Brown 
545c4762a1bSJed Brown    test:
546c4762a1bSJed Brown       suffix: 7_basic
547c4762a1bSJed Brown       nsize: 4
548c4762a1bSJed Brown       args: -test_invert -sf_type basic
549c4762a1bSJed Brown 
550c4762a1bSJed Brown    test:
551c4762a1bSJed Brown       suffix: basic
552c4762a1bSJed Brown       nsize: 4
553c4762a1bSJed Brown       args: -test_bcast -sf_type basic
554c4762a1bSJed Brown       output_file: output/ex1_1_basic.out
555c4762a1bSJed Brown 
556c4762a1bSJed Brown    test:
557c4762a1bSJed Brown       suffix: bcastop_basic
558c4762a1bSJed Brown       nsize: 4
559c4762a1bSJed Brown       args: -test_bcastop -sf_type basic
560c4762a1bSJed Brown       output_file: output/ex1_bcastop_basic.out
561c4762a1bSJed Brown 
562c4762a1bSJed Brown    test:
563c4762a1bSJed Brown       suffix: 8
564c4762a1bSJed Brown       nsize: 3
565c4762a1bSJed Brown       filter: grep -v "type" | grep -v "sort"
566c4762a1bSJed Brown       args: -test_bcast -test_sf_distribute -sf_type window -sf_window_sync {{fence active lock}} -sf_window_flavor {{create dynamic allocate}}
567*dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPI_ONE_SIDED) defined(PETSC_HAVE_MPI_FEATURE_DYNAMIC_WINDOW)
568c4762a1bSJed Brown 
569c4762a1bSJed Brown    test:
570c4762a1bSJed Brown       suffix: 8_basic
571c4762a1bSJed Brown       nsize: 3
572c4762a1bSJed Brown       args: -test_bcast -test_sf_distribute -sf_type basic
573c4762a1bSJed Brown 
574c4762a1bSJed Brown    test:
575c4762a1bSJed Brown       suffix: 9_char
576c4762a1bSJed Brown       nsize: 4
577c4762a1bSJed Brown       args: -sf_type basic -test_bcast -test_reduce -test_op max -test_char
578c4762a1bSJed Brown 
579c4762a1bSJed Brown    # Here we do not test -sf_window_flavor dynamic since it is designed for repeated SFs with few different rootdata pointers
580c4762a1bSJed Brown    test:
581c4762a1bSJed Brown       suffix: 10
582c4762a1bSJed Brown       filter: grep -v "type" | grep -v "sort"
583c4762a1bSJed Brown       nsize: 4
584c4762a1bSJed Brown       args: -sf_type window -sf_window_sync {{fence active lock}} -sf_window_flavor {{create allocate}} -test_all -test_bcastop 0 -test_fetchandop 0
585*dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPI_ONE_SIDED) defined(PETSC_HAVE_MPI_FEATURE_DYNAMIC_WINDOW)
586c4762a1bSJed Brown 
587c4762a1bSJed Brown    # The nightly test suite with MPICH uses ch3:sock, which is broken when winsize == 0 in some of the processes
588c4762a1bSJed Brown    test:
589c4762a1bSJed Brown       suffix: 10_shared
590c4762a1bSJed Brown       output_file: output/ex1_10.out
591c4762a1bSJed Brown       filter: grep -v "type" | grep -v "sort"
592c4762a1bSJed Brown       nsize: 4
593c4762a1bSJed Brown       args: -sf_type window -sf_window_sync {{fence active lock}} -sf_window_flavor shared -test_all -test_bcastop 0 -test_fetchandop 0
594*dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) !defined(PETSC_HAVE_MPICH_NUMVERSION) defined(PETSC_HAVE_MPI_ONE_SIDED) defined(PETSC_HAVE_MPI_FEATURE_DYNAMIC_WINDOW)
595c4762a1bSJed Brown 
596c4762a1bSJed Brown    test:
597c4762a1bSJed Brown       suffix: 10_basic
598c4762a1bSJed Brown       nsize: 4
599c4762a1bSJed Brown       args: -sf_type basic -test_all -test_bcastop 0 -test_fetchandop 0
600c4762a1bSJed Brown 
601c4762a1bSJed Brown TEST*/
602