159599516SKenneth E. Jansen /* This file provides interface functions for 'partial ' random 259599516SKenneth E. Jansen access into the PHASTA input files 359599516SKenneth E. Jansen 459599516SKenneth E. Jansen Anil Karanam March 2001 */ 559599516SKenneth E. Jansen 6d7abaf6cSCameron Smith #include <stdlib.h> 759599516SKenneth E. Jansen #include <stdio.h> 859599516SKenneth E. Jansen #include <string.h> 959599516SKenneth E. Jansen #include <ctype.h> 1059599516SKenneth E. Jansen #include <stdlib.h> 1159599516SKenneth E. Jansen #include <time.h> 1259599516SKenneth E. Jansen #include <math.h> 13d7abaf6cSCameron Smith #include <assert.h> 1459599516SKenneth E. Jansen #include "mpi.h" 1559599516SKenneth E. Jansen #include "phastaIO.h" 1659599516SKenneth E. Jansen #include "rdtsc.h" 1759599516SKenneth E. Jansen #include <FCMangle.h> 1859599516SKenneth E. Jansen #include "new_interface.h" 19ade0e30fSCameron Smith #include "phIO.h" 20d7abaf6cSCameron Smith #include "syncio.h" 21d7abaf6cSCameron Smith #include "posixio.h" 22ecf8d2a9SCameron Smith #include "streamio.h" 2359599516SKenneth E. Jansen #include "common_c.h" 24*20fccb6eSCameron Smith #include "tmrc.h" 2559599516SKenneth E. Jansen 2659599516SKenneth E. Jansen #ifdef intel 2759599516SKenneth E. Jansen #include <winsock2.h> 2859599516SKenneth E. Jansen #else 2959599516SKenneth E. Jansen #include <unistd.h> 3059599516SKenneth E. Jansen #include <strings.h> 3159599516SKenneth E. Jansen #endif 3259599516SKenneth E. Jansen 3359599516SKenneth E. Jansen void igetMinMaxAvg(int *ivalue, double *stats, int *statRanks) { 3459599516SKenneth E. Jansen int isThisRank; 3559599516SKenneth E. Jansen double *value = (double*)malloc(sizeof(double)); 3659599516SKenneth E. Jansen *value = 1.0*(*ivalue); 3759599516SKenneth E. Jansen rgetMinMaxAvg(value,stats,statRanks); 3859599516SKenneth E. Jansen free(value); 3959599516SKenneth E. Jansen } 4059599516SKenneth E. Jansen 4159599516SKenneth E. Jansen void rgetMinMaxAvg(double *value, double *stats, int *statRanks) { 4259599516SKenneth E. Jansen int isThisRank; 4359599516SKenneth E. Jansen 4459599516SKenneth E. Jansen MPI_Allreduce(value,&stats[0],1,MPI_DOUBLE,MPI_MIN,MPI_COMM_WORLD); 4559599516SKenneth E. Jansen isThisRank=workfc.numpe+1; 4659599516SKenneth E. Jansen if(*value==stats[0]) 4759599516SKenneth E. Jansen isThisRank=workfc.myrank; 4859599516SKenneth E. Jansen MPI_Allreduce(&isThisRank,&statRanks[0],1,MPI_INT,MPI_MIN,MPI_COMM_WORLD); 4959599516SKenneth E. Jansen 5059599516SKenneth E. Jansen MPI_Allreduce(value,&stats[1],1,MPI_DOUBLE,MPI_MAX,MPI_COMM_WORLD); 5159599516SKenneth E. Jansen isThisRank=workfc.numpe+1; 5259599516SKenneth E. Jansen if(*value==stats[1]) 5359599516SKenneth E. Jansen isThisRank=workfc.myrank; 5459599516SKenneth E. Jansen MPI_Allreduce(&isThisRank,&statRanks[1],1,MPI_INT,MPI_MIN,MPI_COMM_WORLD); 5559599516SKenneth E. Jansen 5659599516SKenneth E. Jansen MPI_Allreduce(value,&stats[2],1,MPI_DOUBLE,MPI_SUM,MPI_COMM_WORLD); 5759599516SKenneth E. Jansen stats[2] /= workfc.numpe; 5859599516SKenneth E. Jansen 5959599516SKenneth E. Jansen double sqValue = (*value)*(*value), sqValueAvg = 0.; 6059599516SKenneth E. Jansen MPI_Allreduce(&sqValue,&sqValueAvg,1,MPI_DOUBLE,MPI_SUM,MPI_COMM_WORLD); 6159599516SKenneth E. Jansen sqValueAvg /= workfc.numpe; 6259599516SKenneth E. Jansen 6359599516SKenneth E. Jansen stats[3] = sqrt(sqValueAvg-stats[2]*stats[2]); 6459599516SKenneth E. Jansen } 6559599516SKenneth E. Jansen 6659599516SKenneth E. Jansen void print_mesh_stats(void) { 6759599516SKenneth E. Jansen int statRanks[2]; 6859599516SKenneth E. Jansen double iStats[4], rStats[4]; 6959599516SKenneth E. Jansen 7059599516SKenneth E. Jansen igetMinMaxAvg(&conpar.nshg,iStats,statRanks); 7159599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 7259599516SKenneth E. Jansen printf("nshg : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 7359599516SKenneth E. Jansen igetMinMaxAvg(&conpar.numel,iStats,statRanks); 7459599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 7559599516SKenneth E. Jansen printf("numel : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 7659599516SKenneth E. Jansen igetMinMaxAvg(&conpar.numelb,iStats,statRanks); 7759599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 7859599516SKenneth E. Jansen printf("numelb : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 7959599516SKenneth E. Jansen igetMinMaxAvg(&conpar.nnz_tot,iStats,statRanks); 8059599516SKenneth E. Jansen if(workfc.myrank==workfc.master) { 8159599516SKenneth E. Jansen printf("nnz_tot : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 8259599516SKenneth E. Jansen printf("\n"); 8359599516SKenneth E. Jansen } 8459599516SKenneth E. Jansen } 8559599516SKenneth E. Jansen 8659599516SKenneth E. Jansen void print_mpi_stats(void) { 8759599516SKenneth E. Jansen int statRanks[2]; 8859599516SKenneth E. Jansen double iStats[4], rStats[4]; 8959599516SKenneth E. Jansen 9059599516SKenneth E. Jansen // NS equations 9159599516SKenneth E. Jansen igetMinMaxAvg(&mpistats.iISend,iStats,statRanks); 9259599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 9359599516SKenneth E. Jansen printf("iISend : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 9459599516SKenneth E. Jansen igetMinMaxAvg(&mpistats.iIRecv,iStats,statRanks); 9559599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 9659599516SKenneth E. Jansen printf("iIRecv : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 9759599516SKenneth E. Jansen igetMinMaxAvg(&mpistats.iWaitAll,iStats,statRanks); 9859599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 9959599516SKenneth E. Jansen printf("iWtAll : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 10059599516SKenneth E. Jansen igetMinMaxAvg(&mpistats.iAllR,iStats,statRanks); 10159599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 10259599516SKenneth E. Jansen printf("iAllR : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 10359599516SKenneth E. Jansen 10459599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rISend,rStats,statRanks); 10559599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 10659599516SKenneth E. Jansen printf("rISend : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 10759599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rIRecv,rStats,statRanks); 10859599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 10959599516SKenneth E. Jansen printf("rIRecv : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 11059599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rWaitAll,rStats,statRanks); 11159599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 11259599516SKenneth E. Jansen printf("rWtAll : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 11359599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rCommu,rStats,statRanks); 11459599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 11559599516SKenneth E. Jansen printf("rCommu : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 11659599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rAllR,rStats,statRanks); 11759599516SKenneth E. Jansen if(workfc.myrank==workfc.master) { 11859599516SKenneth E. Jansen printf("rAllR : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 11959599516SKenneth E. Jansen printf("\n"); 12059599516SKenneth E. Jansen } 12159599516SKenneth E. Jansen // Scalars 12259599516SKenneth E. Jansen igetMinMaxAvg(&mpistats.iISendScal,iStats,statRanks); 12359599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 12459599516SKenneth E. Jansen printf("iISendScal : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 12559599516SKenneth E. Jansen igetMinMaxAvg(&mpistats.iIRecvScal,iStats,statRanks); 12659599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 12759599516SKenneth E. Jansen printf("iIRecvScal : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 12859599516SKenneth E. Jansen igetMinMaxAvg(&mpistats.iWaitAllScal,iStats,statRanks); 12959599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 13059599516SKenneth E. Jansen printf("iWtAllScal : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 13159599516SKenneth E. Jansen igetMinMaxAvg(&mpistats.iAllRScal,iStats,statRanks); 13259599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 13359599516SKenneth E. Jansen printf("iAllRScal : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 13459599516SKenneth E. Jansen 13559599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rISendScal,rStats,statRanks); 13659599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 13759599516SKenneth E. Jansen printf("rISendScal : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 13859599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rIRecvScal,rStats,statRanks); 13959599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 14059599516SKenneth E. Jansen printf("rIRecvScal : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 14159599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rWaitAllScal,rStats,statRanks); 14259599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 14359599516SKenneth E. Jansen printf("rWtAllScal : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 14459599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rCommuScal,rStats,statRanks); 14559599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 14659599516SKenneth E. Jansen printf("rCommuScal : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 14759599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rAllRScal,rStats,statRanks); 14859599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 14959599516SKenneth E. Jansen printf("rAllRScal : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 15059599516SKenneth E. Jansen 15159599516SKenneth E. Jansen 15259599516SKenneth E. Jansen } 15359599516SKenneth E. Jansen 15459599516SKenneth E. Jansen void print_system_stats(double *tcorecp, double *tcorecpscal) { 15559599516SKenneth E. Jansen int statRanks[2]; 15659599516SKenneth E. Jansen double iStats[4], rStats[4]; 15759599516SKenneth E. Jansen double syst_assembly, syst_solve; 15859599516SKenneth E. Jansen 15959599516SKenneth E. Jansen // NS equations 16059599516SKenneth E. Jansen syst_assembly = tcorecp[0]; 16159599516SKenneth E. Jansen syst_solve = tcorecp[1]; 16259599516SKenneth E. Jansen 16359599516SKenneth E. Jansen rgetMinMaxAvg(&syst_assembly,rStats,statRanks); 16459599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 16559599516SKenneth E. Jansen printf("Elm. form. : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 16659599516SKenneth E. Jansen 16759599516SKenneth E. Jansen rgetMinMaxAvg(&syst_solve,rStats,statRanks); 16859599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 16959599516SKenneth E. Jansen printf("Lin. alg. sol : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 17059599516SKenneth E. Jansen 17159599516SKenneth E. Jansen // Scalars 17259599516SKenneth E. Jansen syst_assembly = tcorecpscal[0]; 17359599516SKenneth E. Jansen syst_solve = tcorecpscal[1]; 17459599516SKenneth E. Jansen 17559599516SKenneth E. Jansen rgetMinMaxAvg(&syst_assembly,rStats,statRanks); 17659599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 17759599516SKenneth E. Jansen printf("Elm. form. Scal. : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 17859599516SKenneth E. Jansen 17959599516SKenneth E. Jansen rgetMinMaxAvg(&syst_solve,rStats,statRanks); 18059599516SKenneth E. Jansen if(workfc.myrank==workfc.master) { 18159599516SKenneth E. Jansen printf("Lin. alg. sol Scal. : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 18259599516SKenneth E. Jansen printf("\n"); 18359599516SKenneth E. Jansen } 18459599516SKenneth E. Jansen } 18559599516SKenneth E. Jansen 18659599516SKenneth E. Jansen 18759599516SKenneth E. Jansen 18859599516SKenneth E. Jansen void countfieldstowriterestart() 18959599516SKenneth E. Jansen { 1902e667770SCameron Smith int nfields = 3; //magic number, solution, time derivatives 19159599516SKenneth E. Jansen 19259599516SKenneth E. Jansen if(outpar.ivort == 1){ 19359599516SKenneth E. Jansen nfields++; //vorticity 19459599516SKenneth E. Jansen } 19559599516SKenneth E. Jansen 19659599516SKenneth E. Jansen if(abs(turbvar.itwmod) != 1 && outpar.iowflux == 1) { 19759599516SKenneth E. Jansen nfields++; //instantaneous wss in bflux.f 19859599516SKenneth E. Jansen } 19959599516SKenneth E. Jansen 200f32d06b0SKenneth E. Jansen // Save every step if(timdat.istep == inpdat.nstep[timdat.itseq-1]){ //Last time step of the computation 20159599516SKenneth E. Jansen 20259599516SKenneth E. Jansen //projection vectors and pressure projection vectors (call saveLesRestart in itrdrv) 2032efdc748SKenneth E. Jansen if(matdat.matflg[0][0] ==-1) { 20459599516SKenneth E. Jansen nfields = nfields +2; 2052efdc748SKenneth E. Jansen } 20659599516SKenneth E. Jansen 20759599516SKenneth E. Jansen //if Print Error Indicators = true (call write_error in itrdrv) 20859599516SKenneth E. Jansen if(turbvar.ierrcalc == 1){ 20959599516SKenneth E. Jansen nfields++; 21059599516SKenneth E. Jansen } 21159599516SKenneth E. Jansen 21259599516SKenneth E. Jansen //if Print ybar = True (call write_field(myrank,'a','ybar',4,... in itrdrv) 21359599516SKenneth E. Jansen if(outpar.ioybar == 1){ 21459599516SKenneth E. Jansen nfields++; //ybar 21559599516SKenneth E. Jansen 21659599516SKenneth E. Jansen //phase average fields 21759599516SKenneth E. Jansen if(outpar.nphasesincycle >0) { 21859599516SKenneth E. Jansen nfields = nfields + outpar.nphasesincycle; 21959599516SKenneth E. Jansen } 22059599516SKenneth E. Jansen 22159599516SKenneth E. Jansen if(abs(turbvar.itwmod) != 1 && outpar.iowflux == 1) { 22259599516SKenneth E. Jansen nfields++; //wssbar 22359599516SKenneth E. Jansen } 22459599516SKenneth E. Jansen 22559599516SKenneth E. Jansen } 22659599516SKenneth E. Jansen 22759599516SKenneth E. Jansen if(turbvari.irans < 0) { 22859599516SKenneth E. Jansen nfields++; //dwal 22959599516SKenneth E. Jansen } 23059599516SKenneth E. Jansen 23132eed141SKenneth E. Jansen // } 23259599516SKenneth E. Jansen 23359599516SKenneth E. Jansen outpar.nsynciofieldswriterestart = nfields; 23459599516SKenneth E. Jansen 23559599516SKenneth E. Jansen if(workfc.myrank == 0) { 23659599516SKenneth E. Jansen printf("Number of fields to write in restart files: %d\n", nfields); 23759599516SKenneth E. Jansen } 23859599516SKenneth E. Jansen } 23959599516SKenneth E. Jansen 24059599516SKenneth E. Jansen 24159599516SKenneth E. Jansen void 24259599516SKenneth E. Jansen Write_Restart( int* pid, 24359599516SKenneth E. Jansen int* stepno, 24459599516SKenneth E. Jansen int* nshg, 24559599516SKenneth E. Jansen int* numVars, 24659599516SKenneth E. Jansen double* array1, 24759599516SKenneth E. Jansen double* array2 ) { 24859599516SKenneth E. Jansen 24959599516SKenneth E. Jansen char fname[255]; 25059599516SKenneth E. Jansen char rfile[60]; 25159599516SKenneth E. Jansen char existingfile[30], linkfile[30]; 25259599516SKenneth E. Jansen int irstou; 2532e667770SCameron Smith const char* magic_name = "byteorder magic number"; 25459599516SKenneth E. Jansen int magic_number = 362436; 25559599516SKenneth E. Jansen double version=0.0; 25659599516SKenneth E. Jansen int isize, nitems; 25759599516SKenneth E. Jansen int iarray[10]; 25859599516SKenneth E. Jansen int nfiles; 25959599516SKenneth E. Jansen int nfields; 26059599516SKenneth E. Jansen int numparts; 26159599516SKenneth E. Jansen int irank; 26259599516SKenneth E. Jansen int nprocs; 2632e667770SCameron Smith int ione = 1; 264*20fccb6eSCameron Smith double iotime = 0; 26559599516SKenneth E. Jansen 26659599516SKenneth E. Jansen // First, count the number of fields to write and store the result in 26759599516SKenneth E. Jansen countfieldstowriterestart(); 26859599516SKenneth E. Jansen 26959599516SKenneth E. Jansen // Retrieve and compute the parameters required for SyncIO 27059599516SKenneth E. Jansen nfiles = outpar.nsynciofiles; 27159599516SKenneth E. Jansen nfields = outpar.nsynciofieldswriterestart; 27259599516SKenneth E. Jansen numparts = workfc.numpe; 27359599516SKenneth E. Jansen irank = *pid; //workfc.myrank; 27459599516SKenneth E. Jansen nprocs = workfc.numpe; 2752efdc748SKenneth E. Jansen int nppp = numparts/nprocs; // always 1 for PHASTA 27659599516SKenneth E. Jansen int descriptor; 2772efdc748SKenneth E. Jansen char filename[255]; 27859599516SKenneth E. Jansen bzero((void*)filename,255); 27959599516SKenneth E. Jansen 280*20fccb6eSCameron Smith iotime = TMRC(); 281740e4609SCameron Smith if(outpar.output_mode == -1 ) 282740e4609SCameron Smith streamio_setup_write(&f_descriptor, streamio_get_r()); 283740e4609SCameron Smith else if(outpar.output_mode == 0 ) 284d7abaf6cSCameron Smith posixio_setup(&f_descriptor, 'w'); 285740e4609SCameron Smith else if(outpar.output_mode > 0 ) 286740e4609SCameron Smith syncio_setup_write(nfiles, nfields, numparts/nfiles, &f_descriptor); 287740e4609SCameron Smith else 288740e4609SCameron Smith exit(EXIT_FAILURE); 289740e4609SCameron Smith phio_constructName(f_descriptor,"restart",filename); 290740e4609SCameron Smith phstr_appendInt(filename, *stepno); 291740e4609SCameron Smith phstr_appendStr(filename, "."); 292d7abaf6cSCameron Smith phio_openfile(filename, f_descriptor); 29359599516SKenneth E. Jansen 29459599516SKenneth E. Jansen field_flag=0; 29559599516SKenneth E. Jansen 2962e667770SCameron Smith // write the magic number 2972e667770SCameron Smith phio_writeheader(f_descriptor, magic_name, (void*)&magic_number, &ione, 2982e667770SCameron Smith &ione, "integer", phasta_iotype); 2992e667770SCameron Smith phio_writedatablock(f_descriptor, magic_name, (void*)&magic_number, 3002e667770SCameron Smith &ione, "integer", phasta_iotype ); 3012e667770SCameron Smith field_flag++; 3021a8cd4edSCameron Smith 30359599516SKenneth E. Jansen int i; 30459599516SKenneth E. Jansen for ( i = 0; i < nppp; i++) { //This loop is useful only if several parts per processor 30559599516SKenneth E. Jansen // Write solution field ... 30659599516SKenneth E. Jansen isize = (*nshg)*(*numVars); 30759599516SKenneth E. Jansen nitems = 3; 30859599516SKenneth E. Jansen iarray[ 0 ] = (*nshg); 30959599516SKenneth E. Jansen iarray[ 1 ] = (*numVars); 31059599516SKenneth E. Jansen iarray[ 2 ] = (*stepno); 31159599516SKenneth E. Jansen 312055123f6SCameron Smith phio_writeheader(f_descriptor, "solution", (void*)iarray, &nitems, 31354d5a0aaSCameron Smith &isize, "double", phasta_iotype); 31459599516SKenneth E. Jansen nitems = (*nshg)*(*numVars); 315055123f6SCameron Smith phio_writedatablock(f_descriptor, "solution", (void*)(array1), 31653d5e07cSCameron Smith &isize, "double", phasta_iotype ); 31759599516SKenneth E. Jansen } 31859599516SKenneth E. Jansen field_flag++; 31959599516SKenneth E. Jansen 32059599516SKenneth E. Jansen for ( i = 0; i < nppp; i++) { 32159599516SKenneth E. Jansen // Write solution field ... 32259599516SKenneth E. Jansen isize = (*nshg)*(*numVars); 32359599516SKenneth E. Jansen nitems = 3; 32459599516SKenneth E. Jansen iarray[ 0 ] = (*nshg); 32559599516SKenneth E. Jansen iarray[ 1 ] = (*numVars); 32659599516SKenneth E. Jansen iarray[ 2 ] = (*stepno); 327055123f6SCameron Smith phio_writeheader(f_descriptor, "time derivative of solution", 32854d5a0aaSCameron Smith (void*)iarray, &nitems, &isize, "double", phasta_iotype); 32959599516SKenneth E. Jansen nitems = (*nshg)*(*numVars); 330055123f6SCameron Smith phio_writedatablock(f_descriptor, "time derivative of solution", 33153d5e07cSCameron Smith (void*)(array2), &isize, "double", phasta_iotype ); 33259599516SKenneth E. Jansen } 33359599516SKenneth E. Jansen field_flag++; 33459599516SKenneth E. Jansen 33559599516SKenneth E. Jansen if (field_flag==nfields){ 336d7abaf6cSCameron Smith phio_closefile(f_descriptor); 33759599516SKenneth E. Jansen if (*pid==0) { 33859599516SKenneth E. Jansen printf("\n"); 33959599516SKenneth E. Jansen } 34059599516SKenneth E. Jansen } 341*20fccb6eSCameron Smith iotime = TMRC() - iotime; 342*20fccb6eSCameron Smith if (workfc.master == workfc.myrank) 343*20fccb6eSCameron Smith printf("time to write restart (seconds) %f\n",iotime); 34459599516SKenneth E. Jansen } 34559599516SKenneth E. Jansen 34659599516SKenneth E. Jansen void 34759599516SKenneth E. Jansen Write_Error( int* pid, 34859599516SKenneth E. Jansen int* stepno, 34959599516SKenneth E. Jansen int* nshg, 35059599516SKenneth E. Jansen int* numVars, 35159599516SKenneth E. Jansen double* array1 ) { 35259599516SKenneth E. Jansen char fname[255]; 35359599516SKenneth E. Jansen char rfile[60]; 35459599516SKenneth E. Jansen int irstou; 35559599516SKenneth E. Jansen double version=0.0; 35659599516SKenneth E. Jansen int isize, nitems; 35759599516SKenneth E. Jansen int iarray[10]; 35859599516SKenneth E. Jansen int nfiles; 35959599516SKenneth E. Jansen int nfields; 36059599516SKenneth E. Jansen int numparts; 36159599516SKenneth E. Jansen int irank; 36259599516SKenneth E. Jansen int nprocs; 36359599516SKenneth E. Jansen 36459599516SKenneth E. Jansen nfiles = outpar.nsynciofiles; 36559599516SKenneth E. Jansen nfields = outpar.nsynciofieldswriterestart; 36659599516SKenneth E. Jansen numparts = workfc.numpe; 36759599516SKenneth E. Jansen irank = *pid; //workfc.myrank; 36859599516SKenneth E. Jansen nprocs = workfc.numpe; 36959599516SKenneth E. Jansen 37059599516SKenneth E. Jansen // Calculate number of parts each proc deal with and where it start and end ... 37159599516SKenneth E. Jansen int nppp = numparts/nprocs;// nppp : Number of parts per proc ... 37259599516SKenneth E. Jansen int startpart = irank * nppp +1;// Part id from which I (myrank) start ... 37359599516SKenneth E. Jansen int endpart = startpart + nppp - 1;// Part id to which I (myrank) end ... 37459599516SKenneth E. Jansen 37559599516SKenneth E. Jansen field_flag++; 37659599516SKenneth E. Jansen 37759599516SKenneth E. Jansen int i; 37859599516SKenneth E. Jansen for ( i = 0; i < nppp; i++ ) { 37959599516SKenneth E. Jansen 38059599516SKenneth E. Jansen if(*pid==0) { 38159599516SKenneth E. Jansen printf("\n"); 382ab9e12e4SCameron Smith printf("The %d/%d th field to be written is 'errors'\n",field_flag,nfields); 38359599516SKenneth E. Jansen } 38459599516SKenneth E. Jansen 38559599516SKenneth E. Jansen isize = (*nshg)*(*numVars); 38659599516SKenneth E. Jansen nitems = 3; 38759599516SKenneth E. Jansen iarray[ 0 ] = (*nshg); 38859599516SKenneth E. Jansen iarray[ 1 ] = (*numVars); 38959599516SKenneth E. Jansen iarray[ 2 ] = (*stepno); 39059599516SKenneth E. Jansen 391055123f6SCameron Smith phio_writeheader(f_descriptor, "errors", (void*)iarray, &nitems, 39254d5a0aaSCameron Smith &isize, "double", phasta_iotype); 39359599516SKenneth E. Jansen 394055123f6SCameron Smith phio_writedatablock(f_descriptor, "errors", (void*)array1, &isize, 39553d5e07cSCameron Smith "double", phasta_iotype ); 39659599516SKenneth E. Jansen } 39759599516SKenneth E. Jansen if (field_flag==nfields){ 398d7abaf6cSCameron Smith phio_closefile(f_descriptor); 39959599516SKenneth E. Jansen if (*pid==0) { 400ab9e12e4SCameron Smith printf("Last field %d 'errors' finished! \n",nfields); 40159599516SKenneth E. Jansen printf("\n"); 40259599516SKenneth E. Jansen } 40359599516SKenneth E. Jansen } 40459599516SKenneth E. Jansen } 40559599516SKenneth E. Jansen 40659599516SKenneth E. Jansen void 40759599516SKenneth E. Jansen Write_Displ( int* pid, 40859599516SKenneth E. Jansen int* stepno, 40959599516SKenneth E. Jansen int* nshg, 41059599516SKenneth E. Jansen int* numVars, 41159599516SKenneth E. Jansen double* array1 ) { 412fd390aa3SCameron Smith fprintf(stderr, "This function is dead...exiting\n"); 413fd390aa3SCameron Smith exit(1); 41459599516SKenneth E. Jansen } 41559599516SKenneth E. Jansen 41659599516SKenneth E. Jansen void 41759599516SKenneth E. Jansen Write_Field( int *pid, 41859599516SKenneth E. Jansen char* filemode, 41959599516SKenneth E. Jansen char* fieldtag, 42059599516SKenneth E. Jansen int* tagsize, 42159599516SKenneth E. Jansen void* array, 42259599516SKenneth E. Jansen char* arraytype, 42359599516SKenneth E. Jansen int* nshg, 42459599516SKenneth E. Jansen int* numvars, 42559599516SKenneth E. Jansen int* stepno) { 42659599516SKenneth E. Jansen char *fieldlabel = (char *)malloc((*tagsize+1)*sizeof(char)); 42759599516SKenneth E. Jansen strncpy(fieldlabel, fieldtag, *tagsize); 42859599516SKenneth E. Jansen fieldlabel[*tagsize] = '\0'; 42959599516SKenneth E. Jansen 43059599516SKenneth E. Jansen int irstou; 43159599516SKenneth E. Jansen double version=0.0; 43259599516SKenneth E. Jansen int isize, nitems; 43359599516SKenneth E. Jansen int iarray[10]; 43459599516SKenneth E. Jansen 43559599516SKenneth E. Jansen char fmode[10]; 43659599516SKenneth E. Jansen if(!strncmp(filemode,"w",1)) 43759599516SKenneth E. Jansen strcpy(fmode,"write"); 43859599516SKenneth E. Jansen else // default is append 43959599516SKenneth E. Jansen strcpy(fmode,"append"); 44059599516SKenneth E. Jansen 44159599516SKenneth E. Jansen char datatype[10]; 44259599516SKenneth E. Jansen if(!strncmp(arraytype,"i",1)) 44359599516SKenneth E. Jansen strcpy(datatype,"int"); 44459599516SKenneth E. Jansen else // default is double 44559599516SKenneth E. Jansen strcpy(datatype,"double"); 44659599516SKenneth E. Jansen 44759599516SKenneth E. Jansen int nfiles; 44859599516SKenneth E. Jansen int nfields; 44959599516SKenneth E. Jansen int numparts; 45059599516SKenneth E. Jansen int irank; 45159599516SKenneth E. Jansen int nprocs; 45259599516SKenneth E. Jansen 45359599516SKenneth E. Jansen nfiles = outpar.nsynciofiles; 45459599516SKenneth E. Jansen nfields = outpar.nsynciofieldswriterestart; 45559599516SKenneth E. Jansen numparts = workfc.numpe; 45659599516SKenneth E. Jansen irank = *pid; //workfc.myrank; 45759599516SKenneth E. Jansen nprocs = workfc.numpe; 45859599516SKenneth E. Jansen 45959599516SKenneth E. Jansen // Calculate number of parts each proc deal with and where it start and end ... 46059599516SKenneth E. Jansen int nppp = numparts/nprocs;// nppp : Number of parts per proc ... 46159599516SKenneth E. Jansen int startpart = irank * nppp +1;// Part id from which I (myrank) start ... 46259599516SKenneth E. Jansen int endpart = startpart + nppp - 1;// Part id to which I (myrank) end ... 46359599516SKenneth E. Jansen 46459599516SKenneth E. Jansen strncpy(fieldlabel, fieldtag, *tagsize); 46559599516SKenneth E. Jansen 46659599516SKenneth E. Jansen field_flag++; 46759599516SKenneth E. Jansen if(*pid==0) { 46859599516SKenneth E. Jansen printf("\n"); 46959599516SKenneth E. Jansen printf("The %d/%d th field to be written is '%s'\n",field_flag,nfields,fieldlabel); 47059599516SKenneth E. Jansen } 47159599516SKenneth E. Jansen 47259599516SKenneth E. Jansen int i; 47359599516SKenneth E. Jansen for ( i = 0; i < nppp; i++ ) { 47459599516SKenneth E. Jansen // Write solution field ... 47559599516SKenneth E. Jansen isize = (*nshg)*(*numvars); 47659599516SKenneth E. Jansen nitems = 3; 47759599516SKenneth E. Jansen iarray[ 0 ] = (*nshg); 47859599516SKenneth E. Jansen iarray[ 1 ] = (*numvars); 47959599516SKenneth E. Jansen iarray[ 2 ] = (*stepno); 48059599516SKenneth E. Jansen 481055123f6SCameron Smith phio_writeheader(f_descriptor, fieldlabel, (void*)iarray, &nitems, 48254d5a0aaSCameron Smith &isize, datatype, phasta_iotype); 48359599516SKenneth E. Jansen nitems = (*nshg)*(*numvars); 484055123f6SCameron Smith phio_writedatablock(f_descriptor, fieldlabel, array, &isize, 48553d5e07cSCameron Smith datatype, phasta_iotype ); 48659599516SKenneth E. Jansen } 48759599516SKenneth E. Jansen if (field_flag==nfields){ 488d7abaf6cSCameron Smith phio_closefile(f_descriptor); 48959599516SKenneth E. Jansen if (*pid==0) { 49059599516SKenneth E. Jansen printf("Last field %d '%s' finished! \n",nfields, fieldtag); 49159599516SKenneth E. Jansen printf("\n"); 49259599516SKenneth E. Jansen } 49359599516SKenneth E. Jansen } 49459599516SKenneth E. Jansen free(fieldlabel); 49559599516SKenneth E. Jansen } 49659599516SKenneth E. Jansen 49759599516SKenneth E. Jansen void 49859599516SKenneth E. Jansen Write_PhAvg2( int* pid, 49959599516SKenneth E. Jansen char* filemode, 50059599516SKenneth E. Jansen char* fieldtag, 50159599516SKenneth E. Jansen int* tagsize, 50259599516SKenneth E. Jansen int* iphase, 50359599516SKenneth E. Jansen int* nphasesincycle, 50459599516SKenneth E. Jansen void* array, 50559599516SKenneth E. Jansen char* arraytype, 50659599516SKenneth E. Jansen int* nshg, 50759599516SKenneth E. Jansen int* numvars, 50859599516SKenneth E. Jansen int* stepno) { 509ade0e30fSCameron Smith int addtagsize=0; // phase number is added to the name of the field 51059599516SKenneth E. Jansen if(*iphase<10) 51159599516SKenneth E. Jansen addtagsize=1; 51259599516SKenneth E. Jansen else if(*iphase<100) 51359599516SKenneth E. Jansen addtagsize=2; 51459599516SKenneth E. Jansen else if(*iphase<1000) 51559599516SKenneth E. Jansen addtagsize=3; 51659599516SKenneth E. Jansen 51759599516SKenneth E. Jansen int tagsize2; 51859599516SKenneth E. Jansen tagsize2=*tagsize+addtagsize; 51959599516SKenneth E. Jansen 52059599516SKenneth E. Jansen char *fieldlabel = (char *)malloc((tagsize2+1)*sizeof(char)); 52159599516SKenneth E. Jansen strncpy(fieldlabel, fieldtag, *tagsize); 52259599516SKenneth E. Jansen fieldlabel[tagsize2] = '\0'; 52359599516SKenneth E. Jansen 52459599516SKenneth E. Jansen char straddtagsize[10]; 52559599516SKenneth E. Jansen sprintf(straddtagsize,"%d",*iphase); 52659599516SKenneth E. Jansen 52759599516SKenneth E. Jansen if(*iphase<10) { 52859599516SKenneth E. Jansen fieldlabel[tagsize2-1]=straddtagsize[0]; 52959599516SKenneth E. Jansen } 53059599516SKenneth E. Jansen else if(*iphase<100) { 53159599516SKenneth E. Jansen fieldlabel[tagsize2-2]=straddtagsize[0]; 53259599516SKenneth E. Jansen fieldlabel[tagsize2-1]=straddtagsize[1]; 53359599516SKenneth E. Jansen } 53459599516SKenneth E. Jansen else if(*iphase<1000) { 53559599516SKenneth E. Jansen fieldlabel[tagsize2-3]=straddtagsize[0]; 53659599516SKenneth E. Jansen fieldlabel[tagsize2-2]=straddtagsize[1]; 53759599516SKenneth E. Jansen fieldlabel[tagsize2-1]=straddtagsize[2]; 53859599516SKenneth E. Jansen } 53959599516SKenneth E. Jansen 54059599516SKenneth E. Jansen int irstou; 54159599516SKenneth E. Jansen double version=0.0; 54259599516SKenneth E. Jansen int isize, nitems; 54359599516SKenneth E. Jansen int iarray[10]; 54459599516SKenneth E. Jansen 54559599516SKenneth E. Jansen char fmode[10]; 54659599516SKenneth E. Jansen if(!strncmp(filemode,"w",1)) 54759599516SKenneth E. Jansen strcpy(fmode,"write"); 54859599516SKenneth E. Jansen else // default is append 54959599516SKenneth E. Jansen strcpy(fmode,"append"); 55059599516SKenneth E. Jansen 55159599516SKenneth E. Jansen char datatype[10]; 55259599516SKenneth E. Jansen if(!strncmp(arraytype,"i",1)) 55359599516SKenneth E. Jansen strcpy(datatype,"int"); 55459599516SKenneth E. Jansen else // default is double 55559599516SKenneth E. Jansen strcpy(datatype,"double"); 55659599516SKenneth E. Jansen 55759599516SKenneth E. Jansen int nfiles; 55859599516SKenneth E. Jansen int nfields; 55959599516SKenneth E. Jansen int numparts; 56059599516SKenneth E. Jansen int irank; 56159599516SKenneth E. Jansen int nprocs; 56259599516SKenneth E. Jansen 56359599516SKenneth E. Jansen nfiles = outpar.nsynciofiles; 56459599516SKenneth E. Jansen nfields = outpar.nsynciofieldswriterestart; 56559599516SKenneth E. Jansen numparts = workfc.numpe; 56659599516SKenneth E. Jansen irank = *pid; //workfc.myrank; 56759599516SKenneth E. Jansen nprocs = workfc.numpe; 56859599516SKenneth E. Jansen 56959599516SKenneth E. Jansen // Calculate number of parts each proc deal with and where it start and end ... 57059599516SKenneth E. Jansen int nppp = numparts/nprocs;// nppp : Number of parts per proc ... 57159599516SKenneth E. Jansen int startpart = irank * nppp +1;// Part id from which I (myrank) start ... 57259599516SKenneth E. Jansen int endpart = startpart + nppp - 1;// Part id to which I (myrank) end ... 57359599516SKenneth E. Jansen 57459599516SKenneth E. Jansen field_flag++; 57559599516SKenneth E. Jansen if(*pid==0) { 57659599516SKenneth E. Jansen printf("\n"); 57759599516SKenneth E. Jansen printf("The %d/%d th field to be written is '%s'\n",field_flag,nfields,fieldlabel); 57859599516SKenneth E. Jansen } 57959599516SKenneth E. Jansen 58059599516SKenneth E. Jansen int i; 58159599516SKenneth E. Jansen for ( i = 0; i < nppp; i++ ) { 58259599516SKenneth E. Jansen // Write solution field ... 58359599516SKenneth E. Jansen isize = (*nshg)*(*numvars); 58459599516SKenneth E. Jansen nitems = 3; 58559599516SKenneth E. Jansen iarray[ 0 ] = (*nshg); 58659599516SKenneth E. Jansen iarray[ 1 ] = (*numvars); 58759599516SKenneth E. Jansen iarray[ 2 ] = (*stepno); 588055123f6SCameron Smith phio_writeheader(f_descriptor, fieldlabel, (void*)iarray, &nitems, 58954d5a0aaSCameron Smith &isize, "double", phasta_iotype); 59059599516SKenneth E. Jansen nitems = (*nshg)*(*numvars); 591055123f6SCameron Smith phio_writedatablock(f_descriptor, fieldlabel, array, &isize, 59253d5e07cSCameron Smith "double", phasta_iotype ); 59359599516SKenneth E. Jansen } 59459599516SKenneth E. Jansen if (field_flag==nfields){ 595d7abaf6cSCameron Smith phio_closefile(f_descriptor); 59659599516SKenneth E. Jansen if (*pid==0) { 59759599516SKenneth E. Jansen printf("\n"); 59859599516SKenneth E. Jansen } 59959599516SKenneth E. Jansen } 60059599516SKenneth E. Jansen free(fieldlabel); 60159599516SKenneth E. Jansen } 602