159599516SKenneth E. Jansen /* This file provides interface functions for 'partial ' random 259599516SKenneth E. Jansen access into the PHASTA input files 359599516SKenneth E. Jansen 459599516SKenneth E. Jansen Anil Karanam March 2001 */ 559599516SKenneth E. Jansen 659599516SKenneth E. Jansen #include <stdio.h> 759599516SKenneth E. Jansen #include <string.h> 859599516SKenneth E. Jansen #include <ctype.h> 959599516SKenneth E. Jansen #include <stdlib.h> 1059599516SKenneth E. Jansen #include <time.h> 1159599516SKenneth E. Jansen #include <math.h> 1259599516SKenneth E. Jansen #include "mpi.h" 1359599516SKenneth E. Jansen #include "phastaIO.h" 1459599516SKenneth E. Jansen #include "rdtsc.h" 1559599516SKenneth E. Jansen #include <FCMangle.h> 1659599516SKenneth E. Jansen #include "new_interface.h" 17*ade0e30fSCameron Smith #include "phIO.h" 1859599516SKenneth E. Jansen 1959599516SKenneth E. Jansen //MR CHANGE 2059599516SKenneth E. Jansen #include "common_c.h" 2159599516SKenneth E. Jansen //MR CHANGE END 2259599516SKenneth E. Jansen 2359599516SKenneth E. Jansen #ifdef intel 2459599516SKenneth E. Jansen #include <winsock2.h> 2559599516SKenneth E. Jansen #else 2659599516SKenneth E. Jansen #include <unistd.h> 2759599516SKenneth E. Jansen #include <strings.h> 2859599516SKenneth E. Jansen #endif 2959599516SKenneth E. Jansen 3059599516SKenneth E. Jansen //extern double cpu_speed = 2600000000.0; //for Jaguar XT5 3159599516SKenneth E. Jansen //extern double cpu_speed = 2100000000.0; //for Jaguar xt4 3259599516SKenneth E. Jansen //extern double cpu_speed = 850000000.0; //for Intrepid 3359599516SKenneth E. Jansen 3459599516SKenneth E. Jansen void igetMinMaxAvg(int *ivalue, double *stats, int *statRanks) { 3559599516SKenneth E. Jansen int isThisRank; 3659599516SKenneth E. Jansen 3759599516SKenneth E. Jansen double *value = (double*)malloc(sizeof(double)); 3859599516SKenneth E. Jansen *value = 1.0*(*ivalue); 3959599516SKenneth E. Jansen 4059599516SKenneth E. Jansen rgetMinMaxAvg(value,stats,statRanks); 4159599516SKenneth E. Jansen 4259599516SKenneth E. Jansen /* MPI_Allreduce(value,&stats[0],1,MPI_DOUBLE,MPI_MIN,MPI_COMM_WORLD); 4359599516SKenneth E. Jansen isThisRank=workfc.numpe+1; 4459599516SKenneth E. Jansen if(*value==stats[0]) 4559599516SKenneth E. Jansen isThisRank=workfc.myrank; 4659599516SKenneth E. Jansen MPI_Allreduce(&isThisRank,&statRanks[0],1,MPI_INT,MPI_MIN,MPI_COMM_WORLD); 4759599516SKenneth E. Jansen 4859599516SKenneth E. Jansen MPI_Allreduce(value,&stats[1],1,MPI_DOUBLE,MPI_MAX,MPI_COMM_WORLD); 4959599516SKenneth E. Jansen isThisRank=workfc.numpe+1; 5059599516SKenneth E. Jansen if(*value==stats[1]) 5159599516SKenneth E. Jansen isThisRank=workfc.myrank; 5259599516SKenneth E. Jansen MPI_Allreduce(&isThisRank,&statRanks[1],1,MPI_INT,MPI_MIN,MPI_COMM_WORLD); 5359599516SKenneth E. Jansen 5459599516SKenneth E. Jansen MPI_Allreduce(value,&stats[2],1,MPI_DOUBLE,MPI_SUM,MPI_COMM_WORLD); 5559599516SKenneth E. Jansen stats[2] /= workfc.numpe; */ 5659599516SKenneth E. Jansen 5759599516SKenneth E. Jansen free(value); 5859599516SKenneth E. Jansen } 5959599516SKenneth E. Jansen 6059599516SKenneth E. Jansen void rgetMinMaxAvg(double *value, double *stats, int *statRanks) { 6159599516SKenneth E. Jansen int isThisRank; 6259599516SKenneth E. Jansen 6359599516SKenneth E. Jansen MPI_Allreduce(value,&stats[0],1,MPI_DOUBLE,MPI_MIN,MPI_COMM_WORLD); 6459599516SKenneth E. Jansen isThisRank=workfc.numpe+1; 6559599516SKenneth E. Jansen if(*value==stats[0]) 6659599516SKenneth E. Jansen isThisRank=workfc.myrank; 6759599516SKenneth E. Jansen MPI_Allreduce(&isThisRank,&statRanks[0],1,MPI_INT,MPI_MIN,MPI_COMM_WORLD); 6859599516SKenneth E. Jansen 6959599516SKenneth E. Jansen MPI_Allreduce(value,&stats[1],1,MPI_DOUBLE,MPI_MAX,MPI_COMM_WORLD); 7059599516SKenneth E. Jansen isThisRank=workfc.numpe+1; 7159599516SKenneth E. Jansen if(*value==stats[1]) 7259599516SKenneth E. Jansen isThisRank=workfc.myrank; 7359599516SKenneth E. Jansen MPI_Allreduce(&isThisRank,&statRanks[1],1,MPI_INT,MPI_MIN,MPI_COMM_WORLD); 7459599516SKenneth E. Jansen 7559599516SKenneth E. Jansen MPI_Allreduce(value,&stats[2],1,MPI_DOUBLE,MPI_SUM,MPI_COMM_WORLD); 7659599516SKenneth E. Jansen stats[2] /= workfc.numpe; 7759599516SKenneth E. Jansen 7859599516SKenneth E. Jansen double sqValue = (*value)*(*value), sqValueAvg = 0.; 7959599516SKenneth E. Jansen MPI_Allreduce(&sqValue,&sqValueAvg,1,MPI_DOUBLE,MPI_SUM,MPI_COMM_WORLD); 8059599516SKenneth E. Jansen sqValueAvg /= workfc.numpe; 8159599516SKenneth E. Jansen // stats[3] = sqValueAvg; 8259599516SKenneth E. Jansen 8359599516SKenneth E. Jansen stats[3] = sqrt(sqValueAvg-stats[2]*stats[2]); 8459599516SKenneth E. Jansen } 8559599516SKenneth E. Jansen 8659599516SKenneth E. Jansen void print_mesh_stats(void) { 8759599516SKenneth E. Jansen int statRanks[2]; 8859599516SKenneth E. Jansen double iStats[4], rStats[4]; 8959599516SKenneth E. Jansen 9059599516SKenneth E. Jansen igetMinMaxAvg(&conpar.nshg,iStats,statRanks); 9159599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 9259599516SKenneth E. Jansen printf("nshg : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 9359599516SKenneth E. Jansen igetMinMaxAvg(&conpar.numel,iStats,statRanks); 9459599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 9559599516SKenneth E. Jansen printf("numel : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 9659599516SKenneth E. Jansen igetMinMaxAvg(&conpar.numelb,iStats,statRanks); 9759599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 9859599516SKenneth E. Jansen printf("numelb : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 9959599516SKenneth E. Jansen igetMinMaxAvg(&conpar.nnz_tot,iStats,statRanks); 10059599516SKenneth E. Jansen if(workfc.myrank==workfc.master) { 10159599516SKenneth E. Jansen printf("nnz_tot : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 10259599516SKenneth E. Jansen printf("\n"); 10359599516SKenneth E. Jansen } 10459599516SKenneth E. Jansen } 10559599516SKenneth E. Jansen 10659599516SKenneth E. Jansen void print_mpi_stats(void) { 10759599516SKenneth E. Jansen int statRanks[2]; 10859599516SKenneth E. Jansen double iStats[4], rStats[4]; 10959599516SKenneth E. Jansen 11059599516SKenneth E. Jansen // NS equations 11159599516SKenneth E. Jansen igetMinMaxAvg(&mpistats.iISend,iStats,statRanks); 11259599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 11359599516SKenneth E. Jansen printf("iISend : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 11459599516SKenneth E. Jansen igetMinMaxAvg(&mpistats.iIRecv,iStats,statRanks); 11559599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 11659599516SKenneth E. Jansen printf("iIRecv : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 11759599516SKenneth E. Jansen igetMinMaxAvg(&mpistats.iWaitAll,iStats,statRanks); 11859599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 11959599516SKenneth E. Jansen printf("iWtAll : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 12059599516SKenneth E. Jansen igetMinMaxAvg(&mpistats.iAllR,iStats,statRanks); 12159599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 12259599516SKenneth E. Jansen printf("iAllR : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 12359599516SKenneth E. Jansen 12459599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rISend,rStats,statRanks); 12559599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 12659599516SKenneth E. Jansen printf("rISend : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 12759599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rIRecv,rStats,statRanks); 12859599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 12959599516SKenneth E. Jansen printf("rIRecv : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 13059599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rWaitAll,rStats,statRanks); 13159599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 13259599516SKenneth E. Jansen printf("rWtAll : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 13359599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rCommu,rStats,statRanks); 13459599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 13559599516SKenneth E. Jansen printf("rCommu : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 13659599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rAllR,rStats,statRanks); 13759599516SKenneth E. Jansen if(workfc.myrank==workfc.master) { 13859599516SKenneth E. Jansen printf("rAllR : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 13959599516SKenneth E. Jansen printf("\n"); 14059599516SKenneth E. Jansen } 14159599516SKenneth E. Jansen // Scalars 14259599516SKenneth E. Jansen igetMinMaxAvg(&mpistats.iISendScal,iStats,statRanks); 14359599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 14459599516SKenneth E. Jansen printf("iISendScal : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 14559599516SKenneth E. Jansen igetMinMaxAvg(&mpistats.iIRecvScal,iStats,statRanks); 14659599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 14759599516SKenneth E. Jansen printf("iIRecvScal : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 14859599516SKenneth E. Jansen igetMinMaxAvg(&mpistats.iWaitAllScal,iStats,statRanks); 14959599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 15059599516SKenneth E. Jansen printf("iWtAllScal : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 15159599516SKenneth E. Jansen igetMinMaxAvg(&mpistats.iAllRScal,iStats,statRanks); 15259599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 15359599516SKenneth E. Jansen printf("iAllRScal : min [%d,%d], max[%d,%d] and avg[.,%d] (rms=%d)\n",statRanks[0],(int)iStats[0],statRanks[1],(int)iStats[1],(int)iStats[2],(int)iStats[3]); 15459599516SKenneth E. Jansen 15559599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rISendScal,rStats,statRanks); 15659599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 15759599516SKenneth E. Jansen printf("rISendScal : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 15859599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rIRecvScal,rStats,statRanks); 15959599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 16059599516SKenneth E. Jansen printf("rIRecvScal : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 16159599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rWaitAllScal,rStats,statRanks); 16259599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 16359599516SKenneth E. Jansen printf("rWtAllScal : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 16459599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rCommuScal,rStats,statRanks); 16559599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 16659599516SKenneth E. Jansen printf("rCommuScal : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 16759599516SKenneth E. Jansen rgetMinMaxAvg(&mpistats.rAllRScal,rStats,statRanks); 16859599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 16959599516SKenneth E. Jansen printf("rAllRScal : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 17059599516SKenneth E. Jansen 17159599516SKenneth E. Jansen 17259599516SKenneth E. Jansen } 17359599516SKenneth E. Jansen 17459599516SKenneth E. Jansen //void print_system_stats(double tcorecp[2]) { 17559599516SKenneth E. Jansen void print_system_stats(double *tcorecp, double *tcorecpscal) { 17659599516SKenneth E. Jansen int statRanks[2]; 17759599516SKenneth E. Jansen double iStats[4], rStats[4]; 17859599516SKenneth E. Jansen double syst_assembly, syst_solve; 17959599516SKenneth E. Jansen 18059599516SKenneth E. Jansen // NS equations 18159599516SKenneth E. Jansen syst_assembly = tcorecp[0]; 18259599516SKenneth E. Jansen syst_solve = tcorecp[1]; 18359599516SKenneth E. Jansen 18459599516SKenneth E. Jansen rgetMinMaxAvg(&syst_assembly,rStats,statRanks); 18559599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 18659599516SKenneth E. Jansen printf("Elm. form. : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 18759599516SKenneth E. Jansen 18859599516SKenneth E. Jansen rgetMinMaxAvg(&syst_solve,rStats,statRanks); 18959599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 19059599516SKenneth E. Jansen printf("Lin. alg. sol : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 19159599516SKenneth E. Jansen 19259599516SKenneth E. Jansen // Scalars 19359599516SKenneth E. Jansen syst_assembly = tcorecpscal[0]; 19459599516SKenneth E. Jansen syst_solve = tcorecpscal[1]; 19559599516SKenneth E. Jansen 19659599516SKenneth E. Jansen rgetMinMaxAvg(&syst_assembly,rStats,statRanks); 19759599516SKenneth E. Jansen if(workfc.myrank==workfc.master) 19859599516SKenneth E. Jansen printf("Elm. form. Scal. : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 19959599516SKenneth E. Jansen 20059599516SKenneth E. Jansen rgetMinMaxAvg(&syst_solve,rStats,statRanks); 20159599516SKenneth E. Jansen if(workfc.myrank==workfc.master) { 20259599516SKenneth E. Jansen printf("Lin. alg. sol Scal. : min [%d,%2.5f], max[%d,%2.5f] and avg[.,%2.5f] (rms=%2.5f)\n",statRanks[0],rStats[0],statRanks[1],rStats[1],rStats[2],rStats[3]); 20359599516SKenneth E. Jansen printf("\n"); 20459599516SKenneth E. Jansen } 20559599516SKenneth E. Jansen //printf("rank %d - syst_assembly %f - syst_solve %f\n",workfc.myrank,syst_assembly,syst_solve); 20659599516SKenneth E. Jansen } 20759599516SKenneth E. Jansen 20859599516SKenneth E. Jansen 20959599516SKenneth E. Jansen 21059599516SKenneth E. Jansen void countfieldstowriterestart() 21159599516SKenneth E. Jansen { 21259599516SKenneth E. Jansen int nfields; 21359599516SKenneth E. Jansen 21459599516SKenneth E. Jansen // printf("TEST: %d %d %d %d %d\n",timdat.istep,timdat.itseq,inpdat.nstep[0],inpdat.nstep[1],timdat.lstep); 21559599516SKenneth E. Jansen 21659599516SKenneth E. Jansen nfields = 2; //solution, time derivatives 21759599516SKenneth E. Jansen 21859599516SKenneth E. Jansen if(outpar.ivort == 1){ 21959599516SKenneth E. Jansen nfields++; //vorticity 22059599516SKenneth E. Jansen } 22159599516SKenneth E. Jansen 22259599516SKenneth E. Jansen if(abs(turbvar.itwmod) != 1 && outpar.iowflux == 1) { 22359599516SKenneth E. Jansen nfields++; //instantaneous wss in bflux.f 22459599516SKenneth E. Jansen } 22559599516SKenneth E. Jansen 22659599516SKenneth E. Jansen // if(ideformwall.eq.1) not handled yet 22759599516SKenneth E. Jansen 22859599516SKenneth E. Jansen if(timdat.istep == inpdat.nstep[timdat.itseq-1]){ //Last time step of the computation 22959599516SKenneth E. Jansen 23059599516SKenneth E. Jansen //projection vectors and pressure projection vectors (call saveLesRestart in itrdrv) 23159599516SKenneth E. Jansen nfields = nfields +2; 23259599516SKenneth E. Jansen 23359599516SKenneth E. Jansen //if Print Error Indicators = true (call write_error in itrdrv) 23459599516SKenneth E. Jansen if(turbvar.ierrcalc == 1){ 23559599516SKenneth E. Jansen nfields++; 23659599516SKenneth E. Jansen } 23759599516SKenneth E. Jansen 23859599516SKenneth E. Jansen //if Print ybar = True (call write_field(myrank,'a','ybar',4,... in itrdrv) 23959599516SKenneth E. Jansen if(outpar.ioybar == 1){ 24059599516SKenneth E. Jansen nfields++; //ybar 24159599516SKenneth E. Jansen 24259599516SKenneth E. Jansen //phase average fields 24359599516SKenneth E. Jansen if(outpar.nphasesincycle >0) { 24459599516SKenneth E. Jansen nfields = nfields + outpar.nphasesincycle; 24559599516SKenneth E. Jansen } 24659599516SKenneth E. Jansen 24759599516SKenneth E. Jansen if(abs(turbvar.itwmod) != 1 && outpar.iowflux == 1) { 24859599516SKenneth E. Jansen nfields++; //wssbar 24959599516SKenneth E. Jansen } 25059599516SKenneth E. Jansen 25159599516SKenneth E. Jansen } 25259599516SKenneth E. Jansen 25359599516SKenneth E. Jansen if(turbvari.irans < 0) { 25459599516SKenneth E. Jansen nfields++; //dwal 25559599516SKenneth E. Jansen } 25659599516SKenneth E. Jansen 25759599516SKenneth E. Jansen } 25859599516SKenneth E. Jansen 25959599516SKenneth E. Jansen outpar.nsynciofieldswriterestart = nfields; 26059599516SKenneth E. Jansen 26159599516SKenneth E. Jansen if(workfc.myrank == 0) { 26259599516SKenneth E. Jansen printf("Number of fields to write in restart files: %d\n", nfields); 26359599516SKenneth E. Jansen } 26459599516SKenneth E. Jansen } 26559599516SKenneth E. Jansen 26659599516SKenneth E. Jansen 26759599516SKenneth E. Jansen void 26859599516SKenneth E. Jansen Write_Restart( int* pid, 26959599516SKenneth E. Jansen int* stepno, 27059599516SKenneth E. Jansen int* nshg, 27159599516SKenneth E. Jansen int* numVars, 27259599516SKenneth E. Jansen double* array1, 27359599516SKenneth E. Jansen double* array2 ) { 27459599516SKenneth E. Jansen 27559599516SKenneth E. Jansen char fname[255]; 27659599516SKenneth E. Jansen char rfile[60]; 27759599516SKenneth E. Jansen char existingfile[30], linkfile[30]; 27859599516SKenneth E. Jansen int irstou; 27959599516SKenneth E. Jansen int magic_number = 362436; 28059599516SKenneth E. Jansen int* mptr = &magic_number; 28159599516SKenneth E. Jansen // time_t timenow = time ( &timenow); 28259599516SKenneth E. Jansen double version=0.0; 28359599516SKenneth E. Jansen int isize, nitems; 28459599516SKenneth E. Jansen int iarray[10]; 28559599516SKenneth E. Jansen 28659599516SKenneth E. Jansen /*sprintf(rfile,"restart.%d.%d",*stepno,*pid+1); 28759599516SKenneth E. Jansen openfile_(rfile,"write", &irstou); 28859599516SKenneth E. Jansen 28959599516SKenneth E. Jansen // writing the top ascii header for the restart file 29059599516SKenneth E. Jansen 29159599516SKenneth E. Jansen writestring_( &irstou,"# PHASTA Input File Version 2.0\n"); 29259599516SKenneth E. Jansen writestring_( &irstou, 29359599516SKenneth E. Jansen "# format \"keyphrase : sizeofnextblock usual headers\"\n"); 29459599516SKenneth E. Jansen 29559599516SKenneth E. Jansen bzero( (void*)fname, 255 ); 29659599516SKenneth E. Jansen sprintf(fname,"# Output generated by phasta version (NOT YET CURRENT): %lf \n", version); 29759599516SKenneth E. Jansen writestring_( &irstou, fname ); 29859599516SKenneth E. Jansen 29959599516SKenneth E. Jansen bzero( (void*)fname, 255 ); 30059599516SKenneth E. Jansen gethostname(fname,255); 30159599516SKenneth E. Jansen writestring_( &irstou,"# This result was produced on: "); 30259599516SKenneth E. Jansen writestring_( &irstou, fname ); 30359599516SKenneth E. Jansen writestring_( &irstou,"\n"); 30459599516SKenneth E. Jansen 30559599516SKenneth E. Jansen bzero( (void*)fname, 255 ); 30659599516SKenneth E. Jansen sprintf(fname,"# %s\n", ctime( &timenow )); 30759599516SKenneth E. Jansen writestring_( &irstou, fname ); 30859599516SKenneth E. Jansen 30959599516SKenneth E. Jansen isize = 1; 31059599516SKenneth E. Jansen nitems = 1; 31159599516SKenneth E. Jansen iarray[ 0 ] = 1; 31259599516SKenneth E. Jansen writeheader_( &irstou, "byteorder magic number ", 31359599516SKenneth E. Jansen (void*)iarray, &nitems, &isize, "integer", phasta_iotype ); 31459599516SKenneth E. Jansen 31559599516SKenneth E. Jansen nitems = 1; 31659599516SKenneth E. Jansen writedatablock_( &irstou, "byteorder magic number ", 31759599516SKenneth E. Jansen (void*)mptr, &nitems, "integer", phasta_iotype ); 31859599516SKenneth E. Jansen 31959599516SKenneth E. Jansen 32059599516SKenneth E. Jansen bzero( (void*)fname, 255 ); 32159599516SKenneth E. Jansen sprintf(fname,"number of modes : < 0 > %d\n", *nshg); 32259599516SKenneth E. Jansen writestring_( &irstou, fname ); 32359599516SKenneth E. Jansen 32459599516SKenneth E. Jansen bzero( (void*)fname, 255 ); 32559599516SKenneth E. Jansen sprintf(fname,"number of variables : < 0 > %d\n", *numVars); 32659599516SKenneth E. Jansen writestring_( &irstou, fname ); 32759599516SKenneth E. Jansen 32859599516SKenneth E. Jansen 32959599516SKenneth E. Jansen isize = (*nshg)*(*numVars); 33059599516SKenneth E. Jansen nitems = 3; 33159599516SKenneth E. Jansen iarray[ 0 ] = (*nshg); 33259599516SKenneth E. Jansen iarray[ 1 ] = (*numVars); 33359599516SKenneth E. Jansen iarray[ 2 ] = (*stepno); 33459599516SKenneth E. Jansen writeheader_( &irstou, "solution ", 33559599516SKenneth E. Jansen (void*)iarray, &nitems, &isize, "double", phasta_iotype ); 33659599516SKenneth E. Jansen 33759599516SKenneth E. Jansen 33859599516SKenneth E. Jansen nitems = (*nshg)*(*numVars); 33959599516SKenneth E. Jansen writedatablock_( &irstou, "solution ", 34059599516SKenneth E. Jansen (void*)(array1), &nitems, "double", phasta_iotype ); 34159599516SKenneth E. Jansen 34259599516SKenneth E. Jansen 34359599516SKenneth E. Jansen 34459599516SKenneth E. Jansen nitems = 3; 34559599516SKenneth E. Jansen writeheader_( &irstou, "time derivative of solution ", 34659599516SKenneth E. Jansen (void*)iarray, &nitems, &isize, "double", phasta_iotype ); 34759599516SKenneth E. Jansen 34859599516SKenneth E. Jansen 34959599516SKenneth E. Jansen nitems = (*nshg)*(*numVars); 35059599516SKenneth E. Jansen writedatablock_( &irstou, "time derivative of solution ", 35159599516SKenneth E. Jansen (void*)(array2), &nitems, "double", phasta_iotype ); 35259599516SKenneth E. Jansen 35359599516SKenneth E. Jansen 35459599516SKenneth E. Jansen closefile_( &irstou, "write" ); 35559599516SKenneth E. Jansen */ 35659599516SKenneth E. Jansen //MPI_Barrier(MPI_COMM_WORLD); 35759599516SKenneth E. Jansen 35859599516SKenneth E. Jansen /////////////////////////////// Start of writing using new-lib //////////////////////////// 35959599516SKenneth E. Jansen 36059599516SKenneth E. Jansen //MR CHANGE 36159599516SKenneth E. Jansen int nfiles; 36259599516SKenneth E. Jansen int nfields; 36359599516SKenneth E. Jansen int numparts; 36459599516SKenneth E. Jansen int irank; 36559599516SKenneth E. Jansen int nprocs; 36659599516SKenneth E. Jansen 36759599516SKenneth E. Jansen // First, count the number of fields to write and store the result in 36859599516SKenneth E. Jansen countfieldstowriterestart(); 36959599516SKenneth E. Jansen 37059599516SKenneth E. Jansen // Retrieve and compute the parameters required for SyncIO 37159599516SKenneth E. Jansen nfiles = outpar.nsynciofiles; 37259599516SKenneth E. Jansen nfields = outpar.nsynciofieldswriterestart; 37359599516SKenneth E. Jansen numparts = workfc.numpe; 37459599516SKenneth E. Jansen irank = *pid; //workfc.myrank; 37559599516SKenneth E. Jansen nprocs = workfc.numpe; 37659599516SKenneth E. Jansen //MR CHANGE END 37759599516SKenneth E. Jansen int nppf = numparts/nfiles; 37859599516SKenneth E. Jansen int GPID; 37959599516SKenneth E. Jansen 38059599516SKenneth E. Jansen // Calculate number of parts each proc deal with and where it start and end ... 38159599516SKenneth E. Jansen int nppp = numparts/nprocs;// nppp : Number of parts per proc ... 38259599516SKenneth E. Jansen int startpart = irank * nppp +1;// Part id from which I (myrank) start ... 38359599516SKenneth E. Jansen int endpart = startpart + nppp - 1;// Part id to which I (myrank) end ... 38459599516SKenneth E. Jansen 38559599516SKenneth E. Jansen int descriptor; 38659599516SKenneth E. Jansen char filename[255],path[255],fieldtag_s[255]; 38759599516SKenneth E. Jansen bzero((void*)filename,255); 38859599516SKenneth E. Jansen bzero((void*)fieldtag_s,255); 38959599516SKenneth E. Jansen 390*ade0e30fSCameron Smith phio_restartname(stepno, filename); 391*ade0e30fSCameron Smith phio_openfile(filename, "write", &nfiles, &nfields, &nppf, &f_descriptor); 39259599516SKenneth E. Jansen 39359599516SKenneth E. Jansen //MR CHANGE 39459599516SKenneth E. Jansen // Measure the time - End of timer 39559599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 39659599516SKenneth E. Jansen // timer_end = rdtsc(); 39759599516SKenneth E. Jansen // time_span=(double)((timer_end-timer_start)/cpu_speed); 39859599516SKenneth E. Jansen // if (*pid==0) { 39959599516SKenneth E. Jansen // printf("Time: 'openfile' of %s with %d fields and %d files is: %f s\n",filename,nfields,nfiles,time_span); 40059599516SKenneth E. Jansen // printf("*****************************\n"); 40159599516SKenneth E. Jansen // } 40259599516SKenneth E. Jansen //MR CHANGE END 40359599516SKenneth E. Jansen 40459599516SKenneth E. Jansen field_flag=0; 40559599516SKenneth E. Jansen 40659599516SKenneth E. Jansen int i; 40759599516SKenneth E. Jansen for ( i = 0; i < nppp; i++) { //This loop is useful only if several parts per processor 40859599516SKenneth E. Jansen // GPID : global part id, corresponds to rank ... 40959599516SKenneth E. Jansen // e.g : (in this example) 41059599516SKenneth E. Jansen // proc 0 : 1--4 41159599516SKenneth E. Jansen // proc 1 : 5--8 ... 41259599516SKenneth E. Jansen GPID = startpart + i; 41359599516SKenneth E. Jansen 41459599516SKenneth E. Jansen // Write solution field ... 41559599516SKenneth E. Jansen sprintf(fieldtag_s,"solution@%d",GPID); 41659599516SKenneth E. Jansen 41759599516SKenneth E. Jansen isize = (*nshg)*(*numVars); 41859599516SKenneth E. Jansen nitems = 3; 41959599516SKenneth E. Jansen iarray[ 0 ] = (*nshg); 42059599516SKenneth E. Jansen iarray[ 1 ] = (*numVars); 42159599516SKenneth E. Jansen iarray[ 2 ] = (*stepno); 42259599516SKenneth E. Jansen 42359599516SKenneth E. Jansen //MR CHANGE 42459599516SKenneth E. Jansen // Measure the time - Start the timer 42559599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 42659599516SKenneth E. Jansen // timer_start = rdtsc(); 42759599516SKenneth E. Jansen //MR CHANGE END 42859599516SKenneth E. Jansen 42959599516SKenneth E. Jansen writeheader( &f_descriptor, fieldtag_s, (void*)iarray, &nitems, &isize, "double", phasta_iotype); 43059599516SKenneth E. Jansen 43159599516SKenneth E. Jansen //MR CHANGE 43259599516SKenneth E. Jansen // Measure the time - End of timer 43359599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 43459599516SKenneth E. Jansen // timer_end = rdtsc(); 43559599516SKenneth E. Jansen // time_span=(double)((timer_end-timer_start)/cpu_speed); 43659599516SKenneth E. Jansen // if (*pid==0) { 43759599516SKenneth E. Jansen // printf("\n*****************************\n"); 43859599516SKenneth E. Jansen // printf("Time: header for 'Solution': %f s\n",time_span); 43959599516SKenneth E. Jansen // } 44059599516SKenneth E. Jansen //MR CHANGE END 44159599516SKenneth E. Jansen 44259599516SKenneth E. Jansen nitems = (*nshg)*(*numVars); 44359599516SKenneth E. Jansen 44459599516SKenneth E. Jansen //MR CHANGE 44559599516SKenneth E. Jansen // Measure the time - Start the timer 44659599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 44759599516SKenneth E. Jansen // timer_start = rdtsc(); 44859599516SKenneth E. Jansen //MR CHANGE END 44959599516SKenneth E. Jansen 45059599516SKenneth E. Jansen writedatablock( &f_descriptor, fieldtag_s, (void*)(array1), &isize, "double", phasta_iotype ); 45159599516SKenneth E. Jansen 45259599516SKenneth E. Jansen //MR CHANGE 45359599516SKenneth E. Jansen // Measure the time - End of timer 45459599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 45559599516SKenneth E. Jansen // timer_end = rdtsc(); 45659599516SKenneth E. Jansen // time_span=(double)((timer_end-timer_start)/cpu_speed); 45759599516SKenneth E. Jansen 45859599516SKenneth E. Jansen // int isizemin,isizemax,isizetot; 45959599516SKenneth E. Jansen // double sizemin,sizemax,sizeavg,sizetot,rate; 46059599516SKenneth E. Jansen 46159599516SKenneth E. Jansen // MPI_Allreduce(&isize,&isizemin,1,MPI_INT,MPI_MIN,MPI_COMM_WORLD); 46259599516SKenneth E. Jansen // MPI_Allreduce(&isize,&isizemax,1,MPI_INT,MPI_MAX,MPI_COMM_WORLD); 46359599516SKenneth E. Jansen // MPI_Allreduce(&isize,&isizetot,1,MPI_INT,MPI_SUM,MPI_COMM_WORLD); 46459599516SKenneth E. Jansen 46559599516SKenneth E. Jansen // sizemin=(double)(8.0*isizemin/1024.0/1024.0); 46659599516SKenneth E. Jansen // sizemax=(double)(8.0*isizemax/1024.0/1024.0); 46759599516SKenneth E. Jansen // sizetot=(double)(8.0*isizetot/1024.0/1024.0); 46859599516SKenneth E. Jansen // sizeavg=(double)(1.0*sizetot/workfc.numpe); 46959599516SKenneth E. Jansen // rate=(double)(1.0*sizetot/time_span); 47059599516SKenneth E. Jansen 47159599516SKenneth E. Jansen // if (*pid==0) { 47259599516SKenneth E. Jansen // printf("Time: block for 'Solution': %f s\n",time_span); 47359599516SKenneth E. Jansen // printf("Time: block: Min= %f MB; Max= %f MB; Avg= %f MB; Tot= %f MB; Rate= %f MB/s; \n",sizemin,sizemax,sizeavg,sizetot,rate); 47459599516SKenneth E. Jansen 47559599516SKenneth E. Jansen // } 47659599516SKenneth E. Jansen //MR CHANGE END 47759599516SKenneth E. Jansen 47859599516SKenneth E. Jansen } 47959599516SKenneth E. Jansen field_flag++; 48059599516SKenneth E. Jansen 48159599516SKenneth E. Jansen for ( i = 0; i < nppp; i++) { 48259599516SKenneth E. Jansen 48359599516SKenneth E. Jansen // GPID : global part id, corresponds to rank ... 48459599516SKenneth E. Jansen // e.g : (in this example) 48559599516SKenneth E. Jansen // proc 0 : 1--4 48659599516SKenneth E. Jansen // proc 1 : 5--8 ... 48759599516SKenneth E. Jansen GPID = startpart + i; 48859599516SKenneth E. Jansen 48959599516SKenneth E. Jansen // Write solution field ... 49059599516SKenneth E. Jansen sprintf(fieldtag_s,"time derivative of solution@%d",GPID); 49159599516SKenneth E. Jansen 49259599516SKenneth E. Jansen isize = (*nshg)*(*numVars); 49359599516SKenneth E. Jansen nitems = 3; 49459599516SKenneth E. Jansen iarray[ 0 ] = (*nshg); 49559599516SKenneth E. Jansen iarray[ 1 ] = (*numVars); 49659599516SKenneth E. Jansen iarray[ 2 ] = (*stepno); 49759599516SKenneth E. Jansen 49859599516SKenneth E. Jansen //MR CHANGE 49959599516SKenneth E. Jansen // Measure the time - Start the timer 50059599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 50159599516SKenneth E. Jansen // timer_start = rdtsc(); 50259599516SKenneth E. Jansen //MR CHANGE END 50359599516SKenneth E. Jansen 50459599516SKenneth E. Jansen writeheader( &f_descriptor, fieldtag_s, (void*)iarray, &nitems, &isize, "double", phasta_iotype); 50559599516SKenneth E. Jansen 50659599516SKenneth E. Jansen //MR CHANGE 50759599516SKenneth E. Jansen // Measure the time - End of timer 50859599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 50959599516SKenneth E. Jansen // timer_end = rdtsc(); 51059599516SKenneth E. Jansen // time_span=(double)((timer_end-timer_start)/cpu_speed); 51159599516SKenneth E. Jansen // if (*pid==0) { 51259599516SKenneth E. Jansen // printf("Time: header for 'Time Derivative of solution': %f s\n",time_span); 51359599516SKenneth E. Jansen // } 51459599516SKenneth E. Jansen //MR CHANGE END 51559599516SKenneth E. Jansen 51659599516SKenneth E. Jansen nitems = (*nshg)*(*numVars); 51759599516SKenneth E. Jansen 51859599516SKenneth E. Jansen //MR CHANGE 51959599516SKenneth E. Jansen // Measure the time - Start the timer 52059599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 52159599516SKenneth E. Jansen // timer_start = rdtsc(); 52259599516SKenneth E. Jansen //MR CHANGE END 52359599516SKenneth E. Jansen 52459599516SKenneth E. Jansen writedatablock( &f_descriptor, fieldtag_s, (void*)(array2), &isize, "double", phasta_iotype ); 52559599516SKenneth E. Jansen 52659599516SKenneth E. Jansen //MR CHANGE 52759599516SKenneth E. Jansen // Measure the time - End of timer 52859599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 52959599516SKenneth E. Jansen // timer_end = rdtsc(); 53059599516SKenneth E. Jansen // time_span=(double)((timer_end-timer_start)/cpu_speed); 53159599516SKenneth E. Jansen 53259599516SKenneth E. Jansen // int isizemin,isizemax,isizetot; 53359599516SKenneth E. Jansen // double sizemin,sizemax,sizeavg,sizetot,rate; 53459599516SKenneth E. Jansen 53559599516SKenneth E. Jansen // MPI_Allreduce(&isize,&isizemin,1,MPI_INT,MPI_MIN,MPI_COMM_WORLD); 53659599516SKenneth E. Jansen // MPI_Allreduce(&isize,&isizemax,1,MPI_INT,MPI_MAX,MPI_COMM_WORLD); 53759599516SKenneth E. Jansen // MPI_Allreduce(&isize,&isizetot,1,MPI_INT,MPI_SUM,MPI_COMM_WORLD); 53859599516SKenneth E. Jansen 53959599516SKenneth E. Jansen // sizemin=(double)(8.0*isizemin/1024.0/1024.0); 54059599516SKenneth E. Jansen // sizemax=(double)(8.0*isizemax/1024.0/1024.0); 54159599516SKenneth E. Jansen // sizetot=(double)(8.0*isizetot/1024.0/1024.0); 54259599516SKenneth E. Jansen // sizeavg=sizetot/workfc.numpe; 54359599516SKenneth E. Jansen // rate=sizetot/time_span; 54459599516SKenneth E. Jansen 54559599516SKenneth E. Jansen // if (*pid==0) { 54659599516SKenneth E. Jansen // printf("Time: block for 'Time Derivative of Solution': %f s\n",time_span); 54759599516SKenneth E. Jansen // printf("Time: block: Min= %f MB; Max= %f MB; Avg= %f MB; Tot= %f MB; Rate= %f MB/s; \n",sizemin,sizemax,sizeavg,sizetot,rate); 54859599516SKenneth E. Jansen // printf("*****************************\n"); 54959599516SKenneth E. Jansen 55059599516SKenneth E. Jansen // } 55159599516SKenneth E. Jansen //MR CHANGE END 55259599516SKenneth E. Jansen 55359599516SKenneth E. Jansen } 55459599516SKenneth E. Jansen field_flag++; 55559599516SKenneth E. Jansen 55659599516SKenneth E. Jansen if (field_flag==nfields){ 55759599516SKenneth E. Jansen 55859599516SKenneth E. Jansen //MR CHANGE 55959599516SKenneth E. Jansen // Measure the time - Start the timer 56059599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 56159599516SKenneth E. Jansen // timer_start = rdtsc(); 56259599516SKenneth E. Jansen //MR CHANGE END 56359599516SKenneth E. Jansen 56459599516SKenneth E. Jansen closefile(&f_descriptor, "write"); 56559599516SKenneth E. Jansen 56659599516SKenneth E. Jansen //MR CHANGE 56759599516SKenneth E. Jansen // Measure the time - End of timer 56859599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 56959599516SKenneth E. Jansen // timer_end = rdtsc(); 57059599516SKenneth E. Jansen // time_span=(double)((timer_end-timer_start)/cpu_speed); 57159599516SKenneth E. Jansen // if (*pid==0) { 57259599516SKenneth E. Jansen // printf("\n*****************************\n"); 57359599516SKenneth E. Jansen // printf("Time: 'closefile' is: %f s\n",time_span); 57459599516SKenneth E. Jansen // } 57559599516SKenneth E. Jansen //MR CHANGE END 57659599516SKenneth E. Jansen 57759599516SKenneth E. Jansen //MR CHANGE 57859599516SKenneth E. Jansen // Measure the time - Start the timer 57959599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 58059599516SKenneth E. Jansen // timer_start = rdtsc(); 58159599516SKenneth E. Jansen //MR CHANGE END 58259599516SKenneth E. Jansen 58359599516SKenneth E. Jansen finalizephmpiio(&f_descriptor); 58459599516SKenneth E. Jansen 58559599516SKenneth E. Jansen //MR CHANGE 58659599516SKenneth E. Jansen // Measure the time - End of timer 58759599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 58859599516SKenneth E. Jansen // timer_end = rdtsc(); 58959599516SKenneth E. Jansen // time_span=(double)((timer_end-timer_start)/cpu_speed); 59059599516SKenneth E. Jansen if (*pid==0) { 59159599516SKenneth E. Jansen // printf("Time: 'finalizephmpiio' is: %f s\n",time_span); 59259599516SKenneth E. Jansen // printf("Last field %d '%s' finished! \n",nfields, fieldtag_s); 59359599516SKenneth E. Jansen printf("\n"); 59459599516SKenneth E. Jansen // printf("*****************************\n"); 59559599516SKenneth E. Jansen } 59659599516SKenneth E. Jansen } 59759599516SKenneth E. Jansen //MR CHANGE END 59859599516SKenneth E. Jansen 59959599516SKenneth E. Jansen 60059599516SKenneth E. Jansen 60159599516SKenneth E. Jansen /////////////////////////////////////////////////////////////////////////////////////////// 60259599516SKenneth E. Jansen 60359599516SKenneth E. Jansen /* create a soft link of the restart we just wrote to restart.latest 60459599516SKenneth E. Jansen this is the file the next run will always try to start from */ 60559599516SKenneth E. Jansen 60659599516SKenneth E. Jansen /* sprintf( linkfile, "restart.latest.%d", *pid+1 ); 60759599516SKenneth E. Jansen unlink( linkfile ); 60859599516SKenneth E. Jansen sprintf( existingfile, "restart.%d.%d", *stepno, *pid+1 ); 60959599516SKenneth E. Jansen link( existingfile, linkfile ); 61059599516SKenneth E. Jansen */ 61159599516SKenneth E. Jansen } 61259599516SKenneth E. Jansen 61359599516SKenneth E. Jansen void 61459599516SKenneth E. Jansen Write_Error( int* pid, 61559599516SKenneth E. Jansen int* stepno, 61659599516SKenneth E. Jansen int* nshg, 61759599516SKenneth E. Jansen int* numVars, 61859599516SKenneth E. Jansen double* array1 ) { 61959599516SKenneth E. Jansen 62059599516SKenneth E. Jansen 62159599516SKenneth E. Jansen char fname[255]; 62259599516SKenneth E. Jansen char rfile[60]; 62359599516SKenneth E. Jansen int irstou; 62459599516SKenneth E. Jansen int magic_number = 362436; 62559599516SKenneth E. Jansen int* mptr = &magic_number; 62659599516SKenneth E. Jansen //printf("Time is commented\n"); 62759599516SKenneth E. Jansen //time_t timenow = time ( &timenow); 62859599516SKenneth E. Jansen //printf("Yes\n"); 62959599516SKenneth E. Jansen double version=0.0; 63059599516SKenneth E. Jansen int isize, nitems; 63159599516SKenneth E. Jansen int iarray[10]; 63259599516SKenneth E. Jansen 63359599516SKenneth E. Jansen /*sprintf(rfile,"restart.%d.%d",*stepno,*pid+1); 63459599516SKenneth E. Jansen openfile_(rfile,"append", &irstou); 63559599516SKenneth E. Jansen 63659599516SKenneth E. Jansen isize = (*nshg)*(*numVars); 63759599516SKenneth E. Jansen nitems = 3; 63859599516SKenneth E. Jansen iarray[ 0 ] = (*nshg); 63959599516SKenneth E. Jansen iarray[ 1 ] = (*numVars); 64059599516SKenneth E. Jansen iarray[ 2 ] = (*stepno); 64159599516SKenneth E. Jansen writeheader_( &irstou, "errors", (void*)iarray, &nitems, &isize, "double", phasta_iotype ); 64259599516SKenneth E. Jansen 64359599516SKenneth E. Jansen 64459599516SKenneth E. Jansen nitems = (*nshg)*(*numVars); 64559599516SKenneth E. Jansen writedatablock_( &irstou, "errors ", (void*)(array1), &nitems, "double", phasta_iotype ); 64659599516SKenneth E. Jansen 64759599516SKenneth E. Jansen closefile_( &irstou, "append" );*/ 64859599516SKenneth E. Jansen 64959599516SKenneth E. Jansen /////////////////////////////// Start of writing using new-lib //////////////////////////// 65059599516SKenneth E. Jansen 65159599516SKenneth E. Jansen int nfiles; 65259599516SKenneth E. Jansen int nfields; 65359599516SKenneth E. Jansen int numparts; 65459599516SKenneth E. Jansen int irank; 65559599516SKenneth E. Jansen int nprocs; 65659599516SKenneth E. Jansen 65759599516SKenneth E. Jansen // unsigned long long timer_start; 65859599516SKenneth E. Jansen // unsigned long long timer_end; 65959599516SKenneth E. Jansen // double time_span; 66059599516SKenneth E. Jansen 66159599516SKenneth E. Jansen nfiles = outpar.nsynciofiles; 66259599516SKenneth E. Jansen nfields = outpar.nsynciofieldswriterestart; 66359599516SKenneth E. Jansen numparts = workfc.numpe; 66459599516SKenneth E. Jansen irank = *pid; //workfc.myrank; 66559599516SKenneth E. Jansen nprocs = workfc.numpe; 66659599516SKenneth E. Jansen 66759599516SKenneth E. Jansen int nppf = numparts/nfiles; 66859599516SKenneth E. Jansen int GPID; 66959599516SKenneth E. Jansen 67059599516SKenneth E. Jansen // Calculate number of parts each proc deal with and where it start and end ... 67159599516SKenneth E. Jansen int nppp = numparts/nprocs;// nppp : Number of parts per proc ... 67259599516SKenneth E. Jansen int startpart = irank * nppp +1;// Part id from which I (myrank) start ... 67359599516SKenneth E. Jansen int endpart = startpart + nppp - 1;// Part id to which I (myrank) end ... 67459599516SKenneth E. Jansen 67559599516SKenneth E. Jansen field_flag++; 67659599516SKenneth E. Jansen 67759599516SKenneth E. Jansen char fieldtag[255]; 67859599516SKenneth E. Jansen 67959599516SKenneth E. Jansen int i; 68059599516SKenneth E. Jansen for ( i = 0; i < nppp; i++ ) { 68159599516SKenneth E. Jansen GPID = startpart + i; 68259599516SKenneth E. Jansen sprintf(fieldtag,"errors@%d",GPID); 68359599516SKenneth E. Jansen 68459599516SKenneth E. Jansen if(*pid==0) { 68559599516SKenneth E. Jansen // printf("\n*****************************\n"); 68659599516SKenneth E. Jansen printf("\n"); 68759599516SKenneth E. Jansen printf("The %d/%d th field to be written is '%s'\n",field_flag,nfields,fieldtag); 68859599516SKenneth E. Jansen } 68959599516SKenneth E. Jansen 69059599516SKenneth E. Jansen isize = (*nshg)*(*numVars); 69159599516SKenneth E. Jansen nitems = 3; 69259599516SKenneth E. Jansen iarray[ 0 ] = (*nshg); 69359599516SKenneth E. Jansen iarray[ 1 ] = (*numVars); 69459599516SKenneth E. Jansen iarray[ 2 ] = (*stepno); 69559599516SKenneth E. Jansen 69659599516SKenneth E. Jansen //MR CHANGE 69759599516SKenneth E. Jansen // Measure the time - Start the timer 69859599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 69959599516SKenneth E. Jansen // timer_start = rdtsc(); 70059599516SKenneth E. Jansen //MR CHANGE END 70159599516SKenneth E. Jansen 70259599516SKenneth E. Jansen writeheader( &f_descriptor, fieldtag, (void*)iarray, &nitems, &isize, "double", phasta_iotype); 70359599516SKenneth E. Jansen 70459599516SKenneth E. Jansen //MR CHANGE 70559599516SKenneth E. Jansen // Measure the time - End of timer 70659599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 70759599516SKenneth E. Jansen // timer_end = rdtsc(); 70859599516SKenneth E. Jansen // time_span=(double)((timer_end-timer_start)/cpu_speed); 70959599516SKenneth E. Jansen // if (*pid==0) { 71059599516SKenneth E. Jansen // printf("Time: header for 'error': %f s\n",time_span); 71159599516SKenneth E. Jansen // } 71259599516SKenneth E. Jansen //MR CHANGE END 71359599516SKenneth E. Jansen 71459599516SKenneth E. Jansen //MR CHANGE 71559599516SKenneth E. Jansen // Measure the time - Start the timer 71659599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 71759599516SKenneth E. Jansen // timer_start = rdtsc(); 71859599516SKenneth E. Jansen //MR CHANGE END 71959599516SKenneth E. Jansen 72059599516SKenneth E. Jansen writedatablock( &f_descriptor, fieldtag, (void*)array1, &isize, "double", phasta_iotype ); 72159599516SKenneth E. Jansen 72259599516SKenneth E. Jansen //MR CHANGE 72359599516SKenneth E. Jansen // Measure the time - End of timer 72459599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 72559599516SKenneth E. Jansen // timer_end = rdtsc(); 72659599516SKenneth E. Jansen // time_span=(double)((timer_end-timer_start)/cpu_speed); 72759599516SKenneth E. Jansen 72859599516SKenneth E. Jansen // int isizemin,isizemax,isizetot; 72959599516SKenneth E. Jansen // double sizemin,sizemax,sizeavg,sizetot,rate; 73059599516SKenneth E. Jansen 73159599516SKenneth E. Jansen // MPI_Allreduce(&isize,&isizemin,1,MPI_INT,MPI_MIN,MPI_COMM_WORLD); 73259599516SKenneth E. Jansen // MPI_Allreduce(&isize,&isizemax,1,MPI_INT,MPI_MAX,MPI_COMM_WORLD); 73359599516SKenneth E. Jansen // MPI_Allreduce(&isize,&isizetot,1,MPI_INT,MPI_SUM,MPI_COMM_WORLD); 73459599516SKenneth E. Jansen 73559599516SKenneth E. Jansen // sizemin=(double)(8.0*isizemin/1024.0/1024.0); 73659599516SKenneth E. Jansen // sizemax=(double)(8.0*isizemax/1024.0/1024.0); 73759599516SKenneth E. Jansen // sizetot=(double)(8.0*isizetot/1024.0/1024.0); 73859599516SKenneth E. Jansen // sizeavg=sizetot/workfc.numpe; 73959599516SKenneth E. Jansen // rate=sizetot/time_span; 74059599516SKenneth E. Jansen 74159599516SKenneth E. Jansen // if (*pid==0) { 74259599516SKenneth E. Jansen // printf("Time: block for 'error': %f s\n",time_span); 74359599516SKenneth E. Jansen // printf("Time: block: Min= %f MB; Max= %f MB; Avg= %f MB; Tot= %f MB; Rate= %f MB/s; \n",sizemin,sizemax,sizeavg,sizetot,rate); 74459599516SKenneth E. Jansen // printf("*****************************\n"); 74559599516SKenneth E. Jansen // } 74659599516SKenneth E. Jansen //MR CHANGE END 74759599516SKenneth E. Jansen 74859599516SKenneth E. Jansen } 74959599516SKenneth E. Jansen 75059599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 75159599516SKenneth E. Jansen // timer_end = rdtsc(); 75259599516SKenneth E. Jansen // time_span=(double)(timer_end-timer_start)/cpu_speed; 75359599516SKenneth E. Jansen 75459599516SKenneth E. Jansen // if (*pid==0) { 75559599516SKenneth E. Jansen // printf("Field 'error' written in: %f s\n",time_span); 75659599516SKenneth E. Jansen // printf("Write field '%s' finished! \n",fieldtag); 75759599516SKenneth E. Jansen // } 75859599516SKenneth E. Jansen 75959599516SKenneth E. Jansen if (field_flag==nfields){ 76059599516SKenneth E. Jansen 76159599516SKenneth E. Jansen //MR CHANGE 76259599516SKenneth E. Jansen // Measure the time - Start the timer 76359599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 76459599516SKenneth E. Jansen // timer_start = rdtsc(); 76559599516SKenneth E. Jansen //MR CHANGE END 76659599516SKenneth E. Jansen 76759599516SKenneth E. Jansen closefile(&f_descriptor, "write"); 76859599516SKenneth E. Jansen 76959599516SKenneth E. Jansen //MR CHANGE 77059599516SKenneth E. Jansen // Measure the time - End of timer 77159599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 77259599516SKenneth E. Jansen // timer_end = rdtsc(); 77359599516SKenneth E. Jansen // time_span=(double)((timer_end-timer_start)/cpu_speed); 77459599516SKenneth E. Jansen // if (*pid==0) { 77559599516SKenneth E. Jansen // printf("\n*****************************\n"); 77659599516SKenneth E. Jansen // printf("Time: 'closefile' is: %f s\n",time_span); 77759599516SKenneth E. Jansen // } 77859599516SKenneth E. Jansen //MR CHANGE END 77959599516SKenneth E. Jansen 78059599516SKenneth E. Jansen //MR CHANGE 78159599516SKenneth E. Jansen // Measure the time - Start the timer 78259599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 78359599516SKenneth E. Jansen // timer_start = rdtsc(); 78459599516SKenneth E. Jansen //MR CHANGE END 78559599516SKenneth E. Jansen 78659599516SKenneth E. Jansen finalizephmpiio(&f_descriptor); 78759599516SKenneth E. Jansen 78859599516SKenneth E. Jansen //MR CHANGE 78959599516SKenneth E. Jansen // Measure the time - End of timer 79059599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 79159599516SKenneth E. Jansen // timer_end = rdtsc(); 79259599516SKenneth E. Jansen // time_span=(double)((timer_end-timer_start)/cpu_speed); 79359599516SKenneth E. Jansen if (*pid==0) { 79459599516SKenneth E. Jansen // printf("Time: 'finalizephmpiio' is: %f s\n",time_span); 79559599516SKenneth E. Jansen printf("Last field %d '%s' finished! \n",nfields, fieldtag); 79659599516SKenneth E. Jansen printf("\n"); 79759599516SKenneth E. Jansen // printf("*****************************\n"); 79859599516SKenneth E. Jansen } 79959599516SKenneth E. Jansen } 80059599516SKenneth E. Jansen //MR CHANGE END 80159599516SKenneth E. Jansen 80259599516SKenneth E. Jansen /////////////////////////////////////////////////////////////////////////////////////////// 80359599516SKenneth E. Jansen 80459599516SKenneth E. Jansen 80559599516SKenneth E. Jansen } 80659599516SKenneth E. Jansen 80759599516SKenneth E. Jansen 80859599516SKenneth E. Jansen void 80959599516SKenneth E. Jansen Write_Displ( int* pid, 81059599516SKenneth E. Jansen int* stepno, 81159599516SKenneth E. Jansen int* nshg, 81259599516SKenneth E. Jansen int* numVars, 81359599516SKenneth E. Jansen double* array1 ) { 81459599516SKenneth E. Jansen 81559599516SKenneth E. Jansen 81659599516SKenneth E. Jansen char fname[255]; 81759599516SKenneth E. Jansen char rfile[60]; 81859599516SKenneth E. Jansen int irstou; 81959599516SKenneth E. Jansen int magic_number = 362436; 82059599516SKenneth E. Jansen int* mptr = &magic_number; 82159599516SKenneth E. Jansen time_t timenow = time ( &timenow); 82259599516SKenneth E. Jansen double version=0.0; 82359599516SKenneth E. Jansen int isize, nitems; 82459599516SKenneth E. Jansen int iarray[10]; 82559599516SKenneth E. Jansen 82659599516SKenneth E. Jansen sprintf(rfile,"restart.%d.%d",*stepno,*pid+1); 82759599516SKenneth E. Jansen openfile(rfile,"append", &irstou); 82859599516SKenneth E. Jansen 82959599516SKenneth E. Jansen isize = (*nshg)*(*numVars); 83059599516SKenneth E. Jansen nitems = 3; 83159599516SKenneth E. Jansen iarray[ 0 ] = (*nshg); 83259599516SKenneth E. Jansen iarray[ 1 ] = (*numVars); 83359599516SKenneth E. Jansen iarray[ 2 ] = (*stepno); 83459599516SKenneth E. Jansen writeheader( &irstou, "displacement", (void*)iarray, &nitems, &isize, "double", phasta_iotype ); 83559599516SKenneth E. Jansen 83659599516SKenneth E. Jansen nitems = (*nshg)*(*numVars); 83759599516SKenneth E. Jansen writedatablock( &irstou, "displacement", (void*)(array1), &nitems, "double", phasta_iotype ); 83859599516SKenneth E. Jansen 83959599516SKenneth E. Jansen closefile( &irstou, "append" ); 84059599516SKenneth E. Jansen } 84159599516SKenneth E. Jansen 84259599516SKenneth E. Jansen void 84359599516SKenneth E. Jansen Write_Field( int *pid, 84459599516SKenneth E. Jansen char* filemode, 84559599516SKenneth E. Jansen char* fieldtag, 84659599516SKenneth E. Jansen int* tagsize, 84759599516SKenneth E. Jansen void* array, 84859599516SKenneth E. Jansen char* arraytype, 84959599516SKenneth E. Jansen int* nshg, 85059599516SKenneth E. Jansen int* numvars, 85159599516SKenneth E. Jansen int* stepno) { 85259599516SKenneth E. Jansen 85359599516SKenneth E. Jansen //printf("Rank is %d, field is %s, tagsize is %d, nshg is %d, numvars is %d\n",*pid,fieldtag,*tagsize,*nshg,*numvars); 85459599516SKenneth E. Jansen 85559599516SKenneth E. Jansen // char rfile[32]; 85659599516SKenneth E. Jansen // assuming restart.sn.(pid+1) 85759599516SKenneth E. Jansen // sprintf(rfile,"restart.%d.%d",*stepno,*pid+1); 85859599516SKenneth E. Jansen 85959599516SKenneth E. Jansen char *fieldlabel = (char *)malloc((*tagsize+1)*sizeof(char)); 86059599516SKenneth E. Jansen strncpy(fieldlabel, fieldtag, *tagsize); 86159599516SKenneth E. Jansen fieldlabel[*tagsize] = '\0'; 86259599516SKenneth E. Jansen 86359599516SKenneth E. Jansen int irstou; 86459599516SKenneth E. Jansen int magic_number = 362436; 86559599516SKenneth E. Jansen int* mptr = &magic_number; 86659599516SKenneth E. Jansen double version=0.0; 86759599516SKenneth E. Jansen int isize, nitems; 86859599516SKenneth E. Jansen int iarray[10]; 86959599516SKenneth E. Jansen 87059599516SKenneth E. Jansen char fmode[10]; 87159599516SKenneth E. Jansen if(!strncmp(filemode,"w",1)) 87259599516SKenneth E. Jansen strcpy(fmode,"write"); 87359599516SKenneth E. Jansen else // default is append 87459599516SKenneth E. Jansen strcpy(fmode,"append"); 87559599516SKenneth E. Jansen 87659599516SKenneth E. Jansen char datatype[10]; 87759599516SKenneth E. Jansen if(!strncmp(arraytype,"i",1)) 87859599516SKenneth E. Jansen strcpy(datatype,"int"); 87959599516SKenneth E. Jansen else // default is double 88059599516SKenneth E. Jansen strcpy(datatype,"double"); 88159599516SKenneth E. Jansen 88259599516SKenneth E. Jansen /* openfile_(rfile, fmode, &irstou); 88359599516SKenneth E. Jansen 88459599516SKenneth E. Jansen nitems = 3; // assuming field will write 3 items in iarray 88559599516SKenneth E. Jansen iarray[ 0 ] = (*nshg); 88659599516SKenneth E. Jansen iarray[ 1 ] = (*numvars); 88759599516SKenneth E. Jansen iarray[ 2 ] = (*stepno); 88859599516SKenneth E. Jansen 88959599516SKenneth E. Jansen isize = (*nshg)*(*numvars); 89059599516SKenneth E. Jansen writeheader_( &irstou, fieldlabel, (void*)iarray, &nitems, &isize, datatype, phasta_iotype ); 89159599516SKenneth E. Jansen 89259599516SKenneth E. Jansen nitems = (*nshg)*(*numvars); 89359599516SKenneth E. Jansen writedatablock_( &irstou, fieldlabel, array, &nitems, datatype, phasta_iotype ); 89459599516SKenneth E. Jansen closefile_( &irstou, fmode); 89559599516SKenneth E. Jansen */ 89659599516SKenneth E. Jansen /////////////////////////////// Start of writing using new-lib //////////////////////////// 89759599516SKenneth E. Jansen 89859599516SKenneth E. Jansen int nfiles; 89959599516SKenneth E. Jansen int nfields; 90059599516SKenneth E. Jansen int numparts; 90159599516SKenneth E. Jansen int irank; 90259599516SKenneth E. Jansen int nprocs; 90359599516SKenneth E. Jansen 90459599516SKenneth E. Jansen // unsigned long long timer_start; 90559599516SKenneth E. Jansen // unsigned long long timer_end; 90659599516SKenneth E. Jansen // double time_span; 90759599516SKenneth E. Jansen 90859599516SKenneth E. Jansen nfiles = outpar.nsynciofiles; 90959599516SKenneth E. Jansen nfields = outpar.nsynciofieldswriterestart; 91059599516SKenneth E. Jansen numparts = workfc.numpe; 91159599516SKenneth E. Jansen irank = *pid; //workfc.myrank; 91259599516SKenneth E. Jansen nprocs = workfc.numpe; 91359599516SKenneth E. Jansen 91459599516SKenneth E. Jansen int nppf = numparts/nfiles; 91559599516SKenneth E. Jansen int GPID; 91659599516SKenneth E. Jansen 91759599516SKenneth E. Jansen // Calculate number of parts each proc deal with and where it start and end ... 91859599516SKenneth E. Jansen int nppp = numparts/nprocs;// nppp : Number of parts per proc ... 91959599516SKenneth E. Jansen int startpart = irank * nppp +1;// Part id from which I (myrank) start ... 92059599516SKenneth E. Jansen int endpart = startpart + nppp - 1;// Part id to which I (myrank) end ... 92159599516SKenneth E. Jansen 92259599516SKenneth E. Jansen char filename[255],path[255],fieldtag_s[255]; 92359599516SKenneth E. Jansen bzero((void*)filename,255); 92459599516SKenneth E. Jansen bzero((void*)fieldtag_s,255); 92559599516SKenneth E. Jansen 92659599516SKenneth E. Jansen strncpy(fieldlabel, fieldtag, *tagsize); 92759599516SKenneth E. Jansen 92859599516SKenneth E. Jansen field_flag++; 92959599516SKenneth E. Jansen if(*pid==0) { 93059599516SKenneth E. Jansen // printf("\n*****************************\n"); 93159599516SKenneth E. Jansen printf("\n"); 93259599516SKenneth E. Jansen printf("The %d/%d th field to be written is '%s'\n",field_flag,nfields,fieldlabel); 93359599516SKenneth E. Jansen } 93459599516SKenneth E. Jansen 93559599516SKenneth E. Jansen sprintf(filename,"restart-dat.%d.%d",*stepno,((int)(irank/(nprocs/nfiles))+1)); 93659599516SKenneth E. Jansen 93759599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 93859599516SKenneth E. Jansen // timer_start = rdtsc(); 93959599516SKenneth E. Jansen 94059599516SKenneth E. Jansen int i; 94159599516SKenneth E. Jansen for ( i = 0; i < nppp; i++ ) { 94259599516SKenneth E. Jansen GPID = startpart + i; 94359599516SKenneth E. Jansen 94459599516SKenneth E. Jansen // Write solution field ... 94559599516SKenneth E. Jansen sprintf(fieldtag_s,"%s@%d",fieldlabel,GPID); 94659599516SKenneth E. Jansen 94759599516SKenneth E. Jansen isize = (*nshg)*(*numvars); 94859599516SKenneth E. Jansen nitems = 3; 94959599516SKenneth E. Jansen iarray[ 0 ] = (*nshg); 95059599516SKenneth E. Jansen iarray[ 1 ] = (*numvars); 95159599516SKenneth E. Jansen iarray[ 2 ] = (*stepno); 95259599516SKenneth E. Jansen 95359599516SKenneth E. Jansen //MR CHANGE 95459599516SKenneth E. Jansen // Measure the time - Start the timer 95559599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 95659599516SKenneth E. Jansen // timer_start = rdtsc(); 95759599516SKenneth E. Jansen //MR CHANGE END 95859599516SKenneth E. Jansen 95959599516SKenneth E. Jansen writeheader( &f_descriptor, fieldtag_s, (void*)iarray, &nitems, &isize, datatype, phasta_iotype); 96059599516SKenneth E. Jansen 96159599516SKenneth E. Jansen //MR CHANGE 96259599516SKenneth E. Jansen // Measure the time - End of timer 96359599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 96459599516SKenneth E. Jansen // timer_end = rdtsc(); 96559599516SKenneth E. Jansen // time_span=(double)((timer_end-timer_start)/cpu_speed); 96659599516SKenneth E. Jansen // if (*pid==0) { 96759599516SKenneth E. Jansen // printf("Time: header for '%s': %f s\n",fieldtag_s,time_span); 96859599516SKenneth E. Jansen // } 96959599516SKenneth E. Jansen //MR CHANGE END 97059599516SKenneth E. Jansen 97159599516SKenneth E. Jansen nitems = (*nshg)*(*numvars); 97259599516SKenneth E. Jansen 97359599516SKenneth E. Jansen //MR CHANGE 97459599516SKenneth E. Jansen // Measure the time - Start the timer 97559599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 97659599516SKenneth E. Jansen // timer_start = rdtsc(); 97759599516SKenneth E. Jansen //MR CHANGE END 97859599516SKenneth E. Jansen 97959599516SKenneth E. Jansen writedatablock( &f_descriptor, fieldtag_s, array, &isize, datatype, phasta_iotype ); 98059599516SKenneth E. Jansen 98159599516SKenneth E. Jansen //MR CHANGE 98259599516SKenneth E. Jansen // Measure the time - End of timer 98359599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 98459599516SKenneth E. Jansen // timer_end = rdtsc(); 98559599516SKenneth E. Jansen // time_span=(double)((timer_end-timer_start)/cpu_speed); 98659599516SKenneth E. Jansen 98759599516SKenneth E. Jansen // int isizemin,isizemax,isizetot; 98859599516SKenneth E. Jansen // double sizemin,sizemax,sizeavg,sizetot,rate; 98959599516SKenneth E. Jansen 99059599516SKenneth E. Jansen // MPI_Allreduce(&isize,&isizemin,1,MPI_INT,MPI_MIN,MPI_COMM_WORLD); 99159599516SKenneth E. Jansen // MPI_Allreduce(&isize,&isizemax,1,MPI_INT,MPI_MAX,MPI_COMM_WORLD); 99259599516SKenneth E. Jansen // MPI_Allreduce(&isize,&isizetot,1,MPI_INT,MPI_SUM,MPI_COMM_WORLD); 99359599516SKenneth E. Jansen 99459599516SKenneth E. Jansen // sizemin=(double)(8.0*isizemin/1024.0/1024.0); 99559599516SKenneth E. Jansen // sizemax=(double)(8.0*isizemax/1024.0/1024.0); 99659599516SKenneth E. Jansen // sizetot=(double)(8.0*isizetot/1024.0/1024.0); 99759599516SKenneth E. Jansen // sizeavg=sizetot/workfc.numpe; 99859599516SKenneth E. Jansen // rate=sizetot/time_span; 99959599516SKenneth E. Jansen 100059599516SKenneth E. Jansen // if (*pid==0) { 100159599516SKenneth E. Jansen // printf("Time: block for '%s': %f s\n",fieldtag_s,time_span); 100259599516SKenneth E. Jansen // printf("Time: block: Min= %f MB; Max= %f MB; Avg= %f MB; Tot= %f MB; Rate= %f MB/s; \n",sizemin,sizemax,sizeavg,sizetot,rate); 100359599516SKenneth E. Jansen // printf("*****************************\n"); 100459599516SKenneth E. Jansen // } 100559599516SKenneth E. Jansen //MR CHANGE END 100659599516SKenneth E. Jansen 100759599516SKenneth E. Jansen } 100859599516SKenneth E. Jansen 100959599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 101059599516SKenneth E. Jansen // timer_end = rdtsc(); 101159599516SKenneth E. Jansen // time_span=(double)(timer_end-timer_start)/cpu_speed; 101259599516SKenneth E. Jansen 101359599516SKenneth E. Jansen // if (*pid==0) { 101459599516SKenneth E. Jansen // printf("Field '%s' written in: %f s\n",fieldtag,time_span); 101559599516SKenneth E. Jansen // printf("Write field '%s' finished! \n",fieldtag_s); 101659599516SKenneth E. Jansen // } 101759599516SKenneth E. Jansen 101859599516SKenneth E. Jansen // if (field_flag==nfields){ 101959599516SKenneth E. Jansen // closefile_(&f_descriptor, "write"); 102059599516SKenneth E. Jansen // finalizephmpiio_(&f_descriptor); 102159599516SKenneth E. Jansen // if(*pid==0) { 102259599516SKenneth E. Jansen // printf("Last field %d '%s' finished! \n",nfields, fieldtag_s); 102359599516SKenneth E. Jansen // printf("\n*****************************\n"); 102459599516SKenneth E. Jansen // } 102559599516SKenneth E. Jansen // } 102659599516SKenneth E. Jansen 102759599516SKenneth E. Jansen if (field_flag==nfields){ 102859599516SKenneth E. Jansen 102959599516SKenneth E. Jansen //MR CHANGE 103059599516SKenneth E. Jansen // Measure the time - Start the timer 103159599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 103259599516SKenneth E. Jansen // timer_start = rdtsc(); 103359599516SKenneth E. Jansen //MR CHANGE END 103459599516SKenneth E. Jansen 103559599516SKenneth E. Jansen closefile(&f_descriptor, "write"); 103659599516SKenneth E. Jansen 103759599516SKenneth E. Jansen //MR CHANGE 103859599516SKenneth E. Jansen // Measure the time - End of timer 103959599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 104059599516SKenneth E. Jansen // timer_end = rdtsc(); 104159599516SKenneth E. Jansen // time_span=(double)((timer_end-timer_start)/cpu_speed); 104259599516SKenneth E. Jansen // if (*pid==0) { 104359599516SKenneth E. Jansen // printf("\n*****************************\n"); 104459599516SKenneth E. Jansen // printf("Time: 'closefile' is: %f s\n",time_span); 104559599516SKenneth E. Jansen // } 104659599516SKenneth E. Jansen //MR CHANGE END 104759599516SKenneth E. Jansen 104859599516SKenneth E. Jansen //MR CHANGE 104959599516SKenneth E. Jansen // Measure the time - Start the timer 105059599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 105159599516SKenneth E. Jansen // timer_start = rdtsc(); 105259599516SKenneth E. Jansen //MR CHANGE END 105359599516SKenneth E. Jansen 105459599516SKenneth E. Jansen finalizephmpiio(&f_descriptor); 105559599516SKenneth E. Jansen 105659599516SKenneth E. Jansen //MR CHANGE 105759599516SKenneth E. Jansen // Measure the time - End of timer 105859599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 105959599516SKenneth E. Jansen // timer_end = rdtsc(); 106059599516SKenneth E. Jansen // time_span=(double)((timer_end-timer_start)/cpu_speed); 106159599516SKenneth E. Jansen if (*pid==0) { 106259599516SKenneth E. Jansen // printf("Time: 'finalizephmpiio' is: %f s\n",time_span); 106359599516SKenneth E. Jansen printf("Last field %d '%s' finished! \n",nfields, fieldtag); 106459599516SKenneth E. Jansen printf("\n"); 106559599516SKenneth E. Jansen // printf("*****************************\n"); 106659599516SKenneth E. Jansen } 106759599516SKenneth E. Jansen } 106859599516SKenneth E. Jansen //MR CHANGE END 106959599516SKenneth E. Jansen 107059599516SKenneth E. Jansen /////////////////////////////////////////////////////////////////////////////////////////// 107159599516SKenneth E. Jansen 107259599516SKenneth E. Jansen free(fieldlabel); 107359599516SKenneth E. Jansen } 107459599516SKenneth E. Jansen 107559599516SKenneth E. Jansen //MR CHANGE 107659599516SKenneth E. Jansen void 107759599516SKenneth E. Jansen Write_PhAvg( int* pid, 107859599516SKenneth E. Jansen char* filemode, 107959599516SKenneth E. Jansen char* fieldtag, 108059599516SKenneth E. Jansen int* tagsize, 108159599516SKenneth E. Jansen int* iphase, 108259599516SKenneth E. Jansen void* array, 108359599516SKenneth E. Jansen char* arraytype, 108459599516SKenneth E. Jansen int* nshg, 108559599516SKenneth E. Jansen int* numvars, 108659599516SKenneth E. Jansen int* stepno) { 108759599516SKenneth E. Jansen 108859599516SKenneth E. Jansen char rfile[32]; 108959599516SKenneth E. Jansen // assuming restart_phase_avg_<sn>.<iphase>.<pid+1> 109059599516SKenneth E. Jansen sprintf(rfile,"restart_phase_avg_%d.%d.%d",*stepno,*iphase,*pid+1); 109159599516SKenneth E. Jansen 109259599516SKenneth E. Jansen char *fieldlabel = (char *)malloc((*tagsize+1)*sizeof(char)); 109359599516SKenneth E. Jansen strncpy(fieldlabel, fieldtag, *tagsize); 109459599516SKenneth E. Jansen fieldlabel[*tagsize] = '\0'; 109559599516SKenneth E. Jansen 109659599516SKenneth E. Jansen int irstou; 109759599516SKenneth E. Jansen int isize, nitems; 109859599516SKenneth E. Jansen int iarray[10]; 109959599516SKenneth E. Jansen 110059599516SKenneth E. Jansen char fmode[10]; 110159599516SKenneth E. Jansen if(!strncmp(filemode,"w",1)) 110259599516SKenneth E. Jansen strcpy(fmode,"write"); 110359599516SKenneth E. Jansen else // default is append 110459599516SKenneth E. Jansen strcpy(fmode,"append"); 110559599516SKenneth E. Jansen 110659599516SKenneth E. Jansen char datatype[10]; 110759599516SKenneth E. Jansen if(!strncmp(arraytype,"i",1)) 110859599516SKenneth E. Jansen strcpy(datatype,"int"); 110959599516SKenneth E. Jansen else // default is double 111059599516SKenneth E. Jansen strcpy(datatype,"double"); 111159599516SKenneth E. Jansen 111259599516SKenneth E. Jansen openfile(rfile, fmode, &irstou); 111359599516SKenneth E. Jansen 111459599516SKenneth E. Jansen if(!strcmp(fmode,"write")) { 111559599516SKenneth E. Jansen // may be create a routine for 'top' portion under write mode 111659599516SKenneth E. Jansen int magic_number = 362436; 111759599516SKenneth E. Jansen int* mptr = &magic_number; 111859599516SKenneth E. Jansen time_t timenow = time ( &timenow); 111959599516SKenneth E. Jansen double version=0.0; 112059599516SKenneth E. Jansen 112159599516SKenneth E. Jansen /* writing the top ascii header for the restart file */ 112259599516SKenneth E. Jansen 112359599516SKenneth E. Jansen writestring( &irstou,"# PHASTA Input File Version 2.0\n"); 112459599516SKenneth E. Jansen writestring( &irstou, 112559599516SKenneth E. Jansen "# format \"keyphrase : sizeofnextblock usual headers\"\n"); 112659599516SKenneth E. Jansen 112759599516SKenneth E. Jansen char fname[255]; 112859599516SKenneth E. Jansen bzero( (void*)fname, 255 ); 112959599516SKenneth E. Jansen sprintf(fname,"# Output generated by phasta version (NOT YET CURRENT): %lf \n", version); 113059599516SKenneth E. Jansen writestring( &irstou, fname ); 113159599516SKenneth E. Jansen 113259599516SKenneth E. Jansen bzero( (void*)fname, 255 ); 113359599516SKenneth E. Jansen gethostname(fname,255); 113459599516SKenneth E. Jansen writestring( &irstou,"# This result was produced on: "); 113559599516SKenneth E. Jansen writestring( &irstou, fname ); 113659599516SKenneth E. Jansen writestring( &irstou,"\n"); 113759599516SKenneth E. Jansen 113859599516SKenneth E. Jansen bzero( (void*)fname, 255 ); 113959599516SKenneth E. Jansen sprintf(fname,"# %s\n", ctime( &timenow )); 114059599516SKenneth E. Jansen writestring( &irstou, fname ); 114159599516SKenneth E. Jansen 114259599516SKenneth E. Jansen isize = 1; 114359599516SKenneth E. Jansen nitems = 1; 114459599516SKenneth E. Jansen iarray[ 0 ] = 1; 114559599516SKenneth E. Jansen writeheader( &irstou, "byteorder magic number ", 114659599516SKenneth E. Jansen (void*)iarray, &nitems, &isize, "integer", phasta_iotype ); 114759599516SKenneth E. Jansen nitems = 1; 114859599516SKenneth E. Jansen writedatablock( &irstou, "byteorder magic number ", 114959599516SKenneth E. Jansen (void*)mptr, &nitems, "integer", phasta_iotype ); 115059599516SKenneth E. Jansen } 115159599516SKenneth E. Jansen 115259599516SKenneth E. Jansen nitems = 3; // assuming field will write 3 items in iarray 115359599516SKenneth E. Jansen iarray[ 0 ] = (*nshg); 115459599516SKenneth E. Jansen iarray[ 1 ] = (*numvars); 115559599516SKenneth E. Jansen iarray[ 2 ] = (*stepno); 115659599516SKenneth E. Jansen 115759599516SKenneth E. Jansen isize = (*nshg)*(*numvars); 115859599516SKenneth E. Jansen writeheader( &irstou, fieldlabel, (void*)iarray, &nitems, &isize, datatype, phasta_iotype ); 115959599516SKenneth E. Jansen 116059599516SKenneth E. Jansen nitems = (*nshg)*(*numvars); 116159599516SKenneth E. Jansen writedatablock( &irstou, fieldlabel, array, &nitems, datatype, phasta_iotype ); 116259599516SKenneth E. Jansen 116359599516SKenneth E. Jansen closefile( &irstou, fmode); 116459599516SKenneth E. Jansen 116559599516SKenneth E. Jansen free(fieldlabel); 116659599516SKenneth E. Jansen } 116759599516SKenneth E. Jansen 116859599516SKenneth E. Jansen //MR CHANGE 116959599516SKenneth E. Jansen void 117059599516SKenneth E. Jansen Write_PhAvg2( int* pid, 117159599516SKenneth E. Jansen char* filemode, 117259599516SKenneth E. Jansen char* fieldtag, 117359599516SKenneth E. Jansen int* tagsize, 117459599516SKenneth E. Jansen int* iphase, 117559599516SKenneth E. Jansen int* nphasesincycle, 117659599516SKenneth E. Jansen void* array, 117759599516SKenneth E. Jansen char* arraytype, 117859599516SKenneth E. Jansen int* nshg, 117959599516SKenneth E. Jansen int* numvars, 118059599516SKenneth E. Jansen int* stepno) { 118159599516SKenneth E. Jansen 118259599516SKenneth E. Jansen // char rfile[32]; 118359599516SKenneth E. Jansen // assuming restart.sn.(pid+1) 118459599516SKenneth E. Jansen // sprintf(rfile,"restart.%d.%d",*stepno,*pid+1); 118559599516SKenneth E. Jansen 1186*ade0e30fSCameron Smith int addtagsize=0; // phase number is added to the name of the field 118759599516SKenneth E. Jansen if(*iphase<10) 118859599516SKenneth E. Jansen addtagsize=1; 118959599516SKenneth E. Jansen else if(*iphase<100) 119059599516SKenneth E. Jansen addtagsize=2; 119159599516SKenneth E. Jansen else if(*iphase<1000) 119259599516SKenneth E. Jansen addtagsize=3; 119359599516SKenneth E. Jansen 119459599516SKenneth E. Jansen int tagsize2; 119559599516SKenneth E. Jansen tagsize2=*tagsize+addtagsize; 119659599516SKenneth E. Jansen 119759599516SKenneth E. Jansen // char *fieldlabel = (char *)malloc((*tagsize+1)*sizeof(char)); 119859599516SKenneth E. Jansen // strncpy(fieldlabel, fieldtag, *tagsize); 119959599516SKenneth E. Jansen // fieldlabel[*tagsize] = '\0'; 120059599516SKenneth E. Jansen 120159599516SKenneth E. Jansen char *fieldlabel = (char *)malloc((tagsize2+1)*sizeof(char)); 120259599516SKenneth E. Jansen strncpy(fieldlabel, fieldtag, *tagsize); 120359599516SKenneth E. Jansen fieldlabel[tagsize2] = '\0'; 120459599516SKenneth E. Jansen 120559599516SKenneth E. Jansen char straddtagsize[10]; 120659599516SKenneth E. Jansen sprintf(straddtagsize,"%d",*iphase); 120759599516SKenneth E. Jansen 120859599516SKenneth E. Jansen if(*iphase<10) { 120959599516SKenneth E. Jansen fieldlabel[tagsize2-1]=straddtagsize[0]; 121059599516SKenneth E. Jansen } 121159599516SKenneth E. Jansen else if(*iphase<100) { 121259599516SKenneth E. Jansen fieldlabel[tagsize2-2]=straddtagsize[0]; 121359599516SKenneth E. Jansen fieldlabel[tagsize2-1]=straddtagsize[1]; 121459599516SKenneth E. Jansen } 121559599516SKenneth E. Jansen else if(*iphase<1000) { 121659599516SKenneth E. Jansen fieldlabel[tagsize2-3]=straddtagsize[0]; 121759599516SKenneth E. Jansen fieldlabel[tagsize2-2]=straddtagsize[1]; 121859599516SKenneth E. Jansen fieldlabel[tagsize2-1]=straddtagsize[2]; 121959599516SKenneth E. Jansen } 122059599516SKenneth E. Jansen 122159599516SKenneth E. Jansen int irstou; 122259599516SKenneth E. Jansen int magic_number = 362436; 122359599516SKenneth E. Jansen int* mptr = &magic_number; 122459599516SKenneth E. Jansen double version=0.0; 122559599516SKenneth E. Jansen int isize, nitems; 122659599516SKenneth E. Jansen int iarray[10]; 122759599516SKenneth E. Jansen 122859599516SKenneth E. Jansen char fmode[10]; 122959599516SKenneth E. Jansen if(!strncmp(filemode,"w",1)) 123059599516SKenneth E. Jansen strcpy(fmode,"write"); 123159599516SKenneth E. Jansen else // default is append 123259599516SKenneth E. Jansen strcpy(fmode,"append"); 123359599516SKenneth E. Jansen 123459599516SKenneth E. Jansen char datatype[10]; 123559599516SKenneth E. Jansen if(!strncmp(arraytype,"i",1)) 123659599516SKenneth E. Jansen strcpy(datatype,"int"); 123759599516SKenneth E. Jansen else // default is double 123859599516SKenneth E. Jansen strcpy(datatype,"double"); 123959599516SKenneth E. Jansen 124059599516SKenneth E. Jansen // 124159599516SKenneth E. Jansen // // if(*iphase==1) //open the file but then keep it open for the remaining cycles 124259599516SKenneth E. Jansen // openfile_(rfile, fmode, &irstou); 124359599516SKenneth E. Jansen // 124459599516SKenneth E. Jansen // // printf("iphase: %d - pid: %d - irstou %d\n",*iphase,*pid,irstou); 124559599516SKenneth E. Jansen // 124659599516SKenneth E. Jansen // 124759599516SKenneth E. Jansen // nitems = 3; // assuming field will write 3 items in iarray 124859599516SKenneth E. Jansen // iarray[ 0 ] = (*nshg); 124959599516SKenneth E. Jansen // iarray[ 1 ] = (*numvars); 125059599516SKenneth E. Jansen // iarray[ 2 ] = (*stepno); 125159599516SKenneth E. Jansen // 125259599516SKenneth E. Jansen // isize = (*nshg)*(*numvars); 125359599516SKenneth E. Jansen // writeheader_( &irstou, fieldlabel, (void*)iarray, &nitems, &isize, datatype, phasta_iotype ); 125459599516SKenneth E. Jansen // 125559599516SKenneth E. Jansen // nitems = (*nshg)*(*numvars); 125659599516SKenneth E. Jansen // writedatablock_( &irstou, fieldlabel, array, &nitems, datatype, phasta_iotype ); 125759599516SKenneth E. Jansen // 125859599516SKenneth E. Jansen // // if(*iphase==*nphasesincycle) //close the file after nphasesincycle 125959599516SKenneth E. Jansen // closefile_( &irstou, fmode); 126059599516SKenneth E. Jansen // 126159599516SKenneth E. Jansen 126259599516SKenneth E. Jansen /////////////////////////////// Start of writing using new-lib //////////////////////////// 126359599516SKenneth E. Jansen 126459599516SKenneth E. Jansen int nfiles; 126559599516SKenneth E. Jansen int nfields; 126659599516SKenneth E. Jansen int numparts; 126759599516SKenneth E. Jansen int irank; 126859599516SKenneth E. Jansen int nprocs; 126959599516SKenneth E. Jansen // unsigned long long timer_start; 127059599516SKenneth E. Jansen // unsigned long long timer_end; 127159599516SKenneth E. Jansen // double time_span; 127259599516SKenneth E. Jansen 127359599516SKenneth E. Jansen nfiles = outpar.nsynciofiles; 127459599516SKenneth E. Jansen nfields = outpar.nsynciofieldswriterestart; 127559599516SKenneth E. Jansen numparts = workfc.numpe; 127659599516SKenneth E. Jansen irank = *pid; //workfc.myrank; 127759599516SKenneth E. Jansen nprocs = workfc.numpe; 127859599516SKenneth E. Jansen 127959599516SKenneth E. Jansen int nppf = numparts/nfiles; 128059599516SKenneth E. Jansen int GPID; 128159599516SKenneth E. Jansen 128259599516SKenneth E. Jansen // Calculate number of parts each proc deal with and where it start and end ... 128359599516SKenneth E. Jansen int nppp = numparts/nprocs;// nppp : Number of parts per proc ... 128459599516SKenneth E. Jansen int startpart = irank * nppp +1;// Part id from which I (myrank) start ... 128559599516SKenneth E. Jansen int endpart = startpart + nppp - 1;// Part id to which I (myrank) end ... 128659599516SKenneth E. Jansen 128759599516SKenneth E. Jansen //int descriptor; 128859599516SKenneth E. Jansen char filename[255],path[255],fieldtag_s[255]; 128959599516SKenneth E. Jansen bzero((void*)filename,255); 129059599516SKenneth E. Jansen bzero((void*)fieldtag_s,255); 129159599516SKenneth E. Jansen 129259599516SKenneth E. Jansen // char * namer; 129359599516SKenneth E. Jansen // namer = strtok(fieldlabel," "); 129459599516SKenneth E. Jansen // strncpy(fieldlabel, fieldtag, *tagsize); 129559599516SKenneth E. Jansen 129659599516SKenneth E. Jansen field_flag++; 129759599516SKenneth E. Jansen if(*pid==0) { 129859599516SKenneth E. Jansen // printf("\n*****************************\n"); 129959599516SKenneth E. Jansen printf("\n"); 130059599516SKenneth E. Jansen printf("The %d/%d th field to be written is '%s'\n",field_flag,nfields,fieldlabel); 130159599516SKenneth E. Jansen } 130259599516SKenneth E. Jansen 130359599516SKenneth E. Jansen sprintf(filename,"restart-dat.%d.%d",*stepno,((int)(irank/(nprocs/nfiles))+1)); 130459599516SKenneth E. Jansen 130559599516SKenneth E. Jansen int i; 130659599516SKenneth E. Jansen for ( i = 0; i < nppp; i++ ) { 130759599516SKenneth E. Jansen GPID = startpart + i; 130859599516SKenneth E. Jansen 130959599516SKenneth E. Jansen // Write solution field ... 131059599516SKenneth E. Jansen sprintf(fieldtag_s,"%s@%d",fieldlabel,GPID); 131159599516SKenneth E. Jansen 131259599516SKenneth E. Jansen //printf("This is %d and fieldtag_s is %s \n",myrank,fieldtag_s); 131359599516SKenneth E. Jansen 131459599516SKenneth E. Jansen isize = (*nshg)*(*numvars); 131559599516SKenneth E. Jansen nitems = 3; 131659599516SKenneth E. Jansen iarray[ 0 ] = (*nshg); 131759599516SKenneth E. Jansen iarray[ 1 ] = (*numvars); 131859599516SKenneth E. Jansen iarray[ 2 ] = (*stepno); 131959599516SKenneth E. Jansen 132059599516SKenneth E. Jansen //MR CHANGE 132159599516SKenneth E. Jansen // Measure the time - Start the timer 132259599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 132359599516SKenneth E. Jansen // timer_start = rdtsc(); 132459599516SKenneth E. Jansen //MR CHANGE END 132559599516SKenneth E. Jansen 132659599516SKenneth E. Jansen writeheader( &f_descriptor, fieldtag_s, (void*)iarray, &nitems, &isize, "double", phasta_iotype); 132759599516SKenneth E. Jansen 132859599516SKenneth E. Jansen //MR CHANGE 132959599516SKenneth E. Jansen // Measure the time - End of timer 133059599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 133159599516SKenneth E. Jansen // timer_end = rdtsc(); 133259599516SKenneth E. Jansen // time_span=(double)((timer_end-timer_start)/cpu_speed); 133359599516SKenneth E. Jansen // if (*pid==0) { 133459599516SKenneth E. Jansen // printf("Time: header for '%s': %f s\n",fieldtag_s,time_span); 133559599516SKenneth E. Jansen // } 133659599516SKenneth E. Jansen //MR CHANGE END 133759599516SKenneth E. Jansen 133859599516SKenneth E. Jansen nitems = (*nshg)*(*numvars); 133959599516SKenneth E. Jansen 134059599516SKenneth E. Jansen //MR CHANGE 134159599516SKenneth E. Jansen // Measure the time - Start the timer 134259599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 134359599516SKenneth E. Jansen // timer_start = rdtsc(); 134459599516SKenneth E. Jansen //MR CHANGE END 134559599516SKenneth E. Jansen 134659599516SKenneth E. Jansen writedatablock( &f_descriptor, fieldtag_s, array, &isize, "double", phasta_iotype ); 134759599516SKenneth E. Jansen 134859599516SKenneth E. Jansen //MR CHANGE 134959599516SKenneth E. Jansen // Measure the time - End of timer 135059599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 135159599516SKenneth E. Jansen // timer_end = rdtsc(); 135259599516SKenneth E. Jansen // time_span=(double)((timer_end-timer_start)/cpu_speed); 135359599516SKenneth E. Jansen 135459599516SKenneth E. Jansen // int isizemin,isizemax,isizetot; 135559599516SKenneth E. Jansen // double sizemin,sizemax,sizeavg,sizetot,rate; 135659599516SKenneth E. Jansen 135759599516SKenneth E. Jansen // MPI_Allreduce(&isize,&isizemin,1,MPI_INT,MPI_MIN,MPI_COMM_WORLD); 135859599516SKenneth E. Jansen // MPI_Allreduce(&isize,&isizemax,1,MPI_INT,MPI_MAX,MPI_COMM_WORLD); 135959599516SKenneth E. Jansen // MPI_Allreduce(&isize,&isizetot,1,MPI_INT,MPI_SUM,MPI_COMM_WORLD); 136059599516SKenneth E. Jansen 136159599516SKenneth E. Jansen // sizemin=(double)(8.0*isizemin/1024.0/1024.0); 136259599516SKenneth E. Jansen // sizemax=(double)(8.0*isizemax/1024.0/1024.0); 136359599516SKenneth E. Jansen // sizetot=(double)(8.0*isizetot/1024.0/1024.0); 136459599516SKenneth E. Jansen // sizeavg=sizetot/workfc.numpe; 136559599516SKenneth E. Jansen // rate=sizetot/time_span; 136659599516SKenneth E. Jansen 136759599516SKenneth E. Jansen // if (*pid==0) { 136859599516SKenneth E. Jansen // printf("Time: block for '%s': %f s\n",fieldtag_s,time_span); 136959599516SKenneth E. Jansen // printf("Time: block: Min= %f MB; Max= %f MB; Avg= %f MB; Tot= %f MB; Rate= %f MB/s; \n",sizemin,sizemax,sizeavg,sizetot,rate); 137059599516SKenneth E. Jansen // printf("*****************************\n"); 137159599516SKenneth E. Jansen // } 137259599516SKenneth E. Jansen //MR CHANGE END 137359599516SKenneth E. Jansen 137459599516SKenneth E. Jansen } 137559599516SKenneth E. Jansen 137659599516SKenneth E. Jansen // if (*pid==0) { 137759599516SKenneth E. Jansen // printf("Field '%s' written in: %f s\n",fieldtag,time_span); 137859599516SKenneth E. Jansen // printf("Write field '%s' finished! \n",fieldtag_s); 137959599516SKenneth E. Jansen // } 138059599516SKenneth E. Jansen 138159599516SKenneth E. Jansen // 138259599516SKenneth E. Jansen // if (field_flag==nfields){ 138359599516SKenneth E. Jansen // closefile_(&f_descriptor, "write"); 138459599516SKenneth E. Jansen // finalizephmpiio_(&f_descriptor); 138559599516SKenneth E. Jansen // if(*pid==0) { 138659599516SKenneth E. Jansen // printf("Last field %d '%s' finished! \n",nfields, fieldtag_s); 138759599516SKenneth E. Jansen // printf("\n*****************************\n"); 138859599516SKenneth E. Jansen // } 138959599516SKenneth E. Jansen // } 139059599516SKenneth E. Jansen 139159599516SKenneth E. Jansen if (field_flag==nfields){ 139259599516SKenneth E. Jansen 139359599516SKenneth E. Jansen //MR CHANGE 139459599516SKenneth E. Jansen // Measure the time - Start the timer 139559599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 139659599516SKenneth E. Jansen // timer_start = rdtsc(); 139759599516SKenneth E. Jansen //MR CHANGE END 139859599516SKenneth E. Jansen 139959599516SKenneth E. Jansen closefile(&f_descriptor, "write"); 140059599516SKenneth E. Jansen 140159599516SKenneth E. Jansen //MR CHANGE 140259599516SKenneth E. Jansen // Measure the time - End of timer 140359599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 140459599516SKenneth E. Jansen // timer_end = rdtsc(); 140559599516SKenneth E. Jansen // time_span=(double)((timer_end-timer_start)/cpu_speed); 140659599516SKenneth E. Jansen // if (*pid==0) { 140759599516SKenneth E. Jansen // printf("\n*****************************\n"); 140859599516SKenneth E. Jansen // printf("Time: 'closefile' is: %f s\n",time_span); 140959599516SKenneth E. Jansen // } 141059599516SKenneth E. Jansen //MR CHANGE END 141159599516SKenneth E. Jansen 141259599516SKenneth E. Jansen //MR CHANGE 141359599516SKenneth E. Jansen // Measure the time - Start the timer 141459599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 141559599516SKenneth E. Jansen // timer_start = rdtsc(); 141659599516SKenneth E. Jansen //MR CHANGE END 141759599516SKenneth E. Jansen 141859599516SKenneth E. Jansen finalizephmpiio(&f_descriptor); 141959599516SKenneth E. Jansen 142059599516SKenneth E. Jansen //MR CHANGE 142159599516SKenneth E. Jansen // Measure the time - End of timer 142259599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 142359599516SKenneth E. Jansen // timer_end = rdtsc(); 142459599516SKenneth E. Jansen // time_span=(double)((timer_end-timer_start)/cpu_speed); 142559599516SKenneth E. Jansen if (*pid==0) { 142659599516SKenneth E. Jansen // printf("Time: 'finalizephmpiio' is: %f s\n",time_span); 142759599516SKenneth E. Jansen // printf("Last field %d '%s' finished! \n",nfields, fieldtag); 142859599516SKenneth E. Jansen printf("\n"); 142959599516SKenneth E. Jansen // printf("*****************************\n"); 143059599516SKenneth E. Jansen } 143159599516SKenneth E. Jansen } 143259599516SKenneth E. Jansen //MR CHANGE END 143359599516SKenneth E. Jansen 143459599516SKenneth E. Jansen /////////////////////////////////////////////////////////////////////////////////////////// 143559599516SKenneth E. Jansen 143659599516SKenneth E. Jansen free(fieldlabel); 143759599516SKenneth E. Jansen } 143859599516SKenneth E. Jansen 143959599516SKenneth E. Jansen 144059599516SKenneth E. Jansen void 144159599516SKenneth E. Jansen Write_d2wall( int* pid, 144259599516SKenneth E. Jansen int* numnp, 144359599516SKenneth E. Jansen double* array1 ) { 144459599516SKenneth E. Jansen 144559599516SKenneth E. Jansen // time_t timenow = time ( &timenow); 144659599516SKenneth E. Jansen int isize, nitems; 144759599516SKenneth E. Jansen int iarray[10]; 144859599516SKenneth E. Jansen 144959599516SKenneth E. Jansen // MPI_Barrier(MPI_COMM_WORLD); 145059599516SKenneth E. Jansen 145159599516SKenneth E. Jansen /////////////////////////////// Start of writing using new-lib //////////////////////////// 145259599516SKenneth E. Jansen 145359599516SKenneth E. Jansen int nfiles; 145459599516SKenneth E. Jansen int nfields; 145559599516SKenneth E. Jansen int numparts; 145659599516SKenneth E. Jansen int irank; 145759599516SKenneth E. Jansen int nprocs; 145859599516SKenneth E. Jansen 145959599516SKenneth E. Jansen // First, count the number of fields to write and store the result in 146059599516SKenneth E. Jansen //countfieldstowriterestart(); 146159599516SKenneth E. Jansen 146259599516SKenneth E. Jansen // Retrieve and compute the parameters required for SyncIO 146359599516SKenneth E. Jansen nfiles = outpar.nsynciofiles; 146459599516SKenneth E. Jansen nfields = 1; //outpar.nsynciofieldswriterestart; // Only the distance to the walls in d2wall 146559599516SKenneth E. Jansen numparts = workfc.numpe; 146659599516SKenneth E. Jansen irank = *pid; //workfc.myrank; 146759599516SKenneth E. Jansen nprocs = workfc.numpe; 146859599516SKenneth E. Jansen int nppf = numparts/nfiles; 146959599516SKenneth E. Jansen int GPID; 147059599516SKenneth E. Jansen 147159599516SKenneth E. Jansen // Calculate number of parts each proc deal with and where it start and end ... 147259599516SKenneth E. Jansen int nppp = numparts/nprocs;// nppp : Number of parts per proc ... 147359599516SKenneth E. Jansen int startpart = irank * nppp +1;// Part id from which I (myrank) start ... 147459599516SKenneth E. Jansen int endpart = startpart + nppp - 1;// Part id to which I (myrank) end ... 147559599516SKenneth E. Jansen 147659599516SKenneth E. Jansen int descriptor; 147759599516SKenneth E. Jansen char filename[255],path[255],fieldtag_s[255]; 147859599516SKenneth E. Jansen bzero((void*)filename,255); 147959599516SKenneth E. Jansen bzero((void*)fieldtag_s,255); 148059599516SKenneth E. Jansen 1481*ade0e30fSCameron Smith phio_openfile("d2wall.", "write", &nfiles, &nfields, &nppf, &f_descriptor); 148259599516SKenneth E. Jansen 148359599516SKenneth E. Jansen field_flag=0; 148459599516SKenneth E. Jansen 148559599516SKenneth E. Jansen int i; 148659599516SKenneth E. Jansen for ( i = 0; i < nppp; i++) { //This loop is useful only if several parts per processor 148759599516SKenneth E. Jansen // GPID : global part id, corresponds to rank ... 148859599516SKenneth E. Jansen // e.g : (in this example) 148959599516SKenneth E. Jansen // proc 0 : 1--4 149059599516SKenneth E. Jansen // proc 1 : 5--8 ... 149159599516SKenneth E. Jansen GPID = startpart + i; 149259599516SKenneth E. Jansen 149359599516SKenneth E. Jansen // Write solution field ... 149459599516SKenneth E. Jansen sprintf(fieldtag_s,"d2wall@%d",GPID); 149559599516SKenneth E. Jansen 149659599516SKenneth E. Jansen isize = (*numnp); 149759599516SKenneth E. Jansen nitems = 2; 149859599516SKenneth E. Jansen iarray[ 0 ] = (*numnp); 149959599516SKenneth E. Jansen iarray[ 1 ] = 1; //numVars = 1 150059599516SKenneth E. Jansen 150159599516SKenneth E. Jansen writeheader( &f_descriptor, fieldtag_s, (void*)iarray, &nitems, &isize, "double", phasta_iotype); 150259599516SKenneth E. Jansen 150359599516SKenneth E. Jansen //nitems = (*nshg)*(*numVars); 150459599516SKenneth E. Jansen //nitems = (*numnp); 150559599516SKenneth E. Jansen 150659599516SKenneth E. Jansen writedatablock( &f_descriptor, fieldtag_s, (void*)(array1), &isize, "double", phasta_iotype ); 150759599516SKenneth E. Jansen 150859599516SKenneth E. Jansen 150959599516SKenneth E. Jansen } 151059599516SKenneth E. Jansen field_flag++; 151159599516SKenneth E. Jansen 151259599516SKenneth E. Jansen if (field_flag==nfields){ 151359599516SKenneth E. Jansen 151459599516SKenneth E. Jansen closefile(&f_descriptor, "write"); 151559599516SKenneth E. Jansen 151659599516SKenneth E. Jansen finalizephmpiio(&f_descriptor); 151759599516SKenneth E. Jansen 151859599516SKenneth E. Jansen if (irank==0) { 151959599516SKenneth E. Jansen printf("\n"); 152059599516SKenneth E. Jansen } 152159599516SKenneth E. Jansen } 152259599516SKenneth E. Jansen } 152359599516SKenneth E. Jansen 1524