Merge MR !165, 'jrwrigh/plex_filter_fix', into 'main'

fix(upstream): Update DMPlexFilter with new arguments from petsc:!8876

See merge request phypid/honee!165

fix(upstream): PETSc changes to PetscCtxDestroyFn

Merge MR !161, 'jrwrigh/dm-utils-coords', into 'main'

feat(dm_utils): Add Coordinate-specific getter for CeedField values

See merge request phypid/honee!161

feat: Remove coordinate args from QDataBoundaryGradientGet()

feat: Remove coordinate arguments from QDataGet()

They are obtained directly from the passed in DM object

feat: Add dedicated mesh transform functionality

Mostly so that the mesh transformation can occur independently of the
coordinate scaling process.

Merge MR !160, 'jrwrigh/ratel_dm_utils', into 'main'

feat(dm-utils): Save Basis and ElemRestriction to DM upon creation

Closes #8

See merge request phypid/honee!160

feat: Replace honee->elem_restr_q and basis_q with creation routines

feat: Add DMLABEL_DEFAULT and DMLABEL_DEFAULT_VALUE

Helper variables to make it more clear what is being done for the
default DMLabel and the default label value as well.

style(dm-utils): Rename Basis routines to match ElemRestriction

Merge MR !157, 'jrwrigh/format_parentesis_break', into 'main'

style: Change clang-format to penalize newline after open ()

See merge request phypid/honee!157

style: Change clang-format to penalize newline after open ()

Merge MR !155, 'jrwrigh/libCEED_Function_Changes', into 'main'

upstream: Update libCEED Function names

See merge request phypid/honee!155

WIP: Updated libCEED Functions

Merge MR !146, 'jrwrigh/refactor', into 'main'

refactor: Use compound literals for struct initialization

See merge request phypid/honee!146

style: Get local section once for divFdiff projection setup

refactor: Use compound literals for struct setting

Using compound literals to initialize structs is often either easier to
read or more compact than setting struct members individually
one-by-one.

Merge MR !145, 'jrwrigh/refactor', into 'main'

refactor: Change default struct in Newtonian, change Calloc1() -> New(), DivFDiff changes

See merge request phypid/honee!145

style: Change PetscCalloc1(1, ...) into PetscNew(...)

refactor(divFdiff): Make divFdiff method explicit argument in setup

Merge MR !137, 'jrwrigh/problem_components', into 'main'

feat: Set number of components in problem setup

Closes #37

See merge request phypid/honee!137

feat: Set number of components in problem setup

Same with the name of those components

Merge MR !133, 'Amin/units', into 'main'

Unify `Units` setup

See merge request phypid/honee!133

(!133) Unify `Units` setup

Merge MR !122, 'jrwrigh/honee_petscobject', into 'main'

feat: Convert Honee to PetscObject, remove auxillary structs

See merge request phypid/honee!122