Merge MR !43, 'jrwrigh/advection_div_diff_flux', into 'main'

Implement DivDiffFluxProjection for advection diffusion

See merge request phypid/honee!43

feat(advdif): Implement indirect div(F_diff) projection

Merge branch 'jrwrigh/diff_flux' into 'main'

feat: Add divergence of diffusive flux projection

See merge request phypid/honee!27

feat: Implement divergence of diffusive flux

Merge branch 'jrwrigh/misc_refactor' into 'main'

refactor: Clean up global struct members

See merge request phypid/honee!31

refactor: Remove `dim` from ProblemData

Should just grab that from the DM

Merge branch 'jrwrigh/refactor' into 'main'

refactor: Make consistent QF naming, cleanup navierstokes.h

Closes #9

See merge request phypid/honee!26

refactor: Remove redundant comments from navierstokes.h

And newlines too

Merge branch 'jrwrigh/default_option' into 'main'

internal: Add HoneeOptionsSetValueDefault

See merge request phypid/honee!23

internal: Add HONEEOptionsSetValueDefault

Merge branch 'jrwrigh/separate_phasta_file' into 'main'

Move file-io functions to honee-file.c

See merge request phypid/honee!24

refactor: Remove SetupICsFromBinary

- Only used once, might as well just directly call HoneeLoadBinaryVec

internal: Remove comm argument from HoneeLoadBinaryVec

refactor: honee-file functions

internal: Add honee-file

Merge branch 'jrwrigh/license_changes' into 'main'

Update License post libCEED fork

See merge request phypid/honee!6

chore: Move to Apache-2.0 OR BSD-2-Clause

Merge branch 'jrwrigh/fix_malloc_issues' into 'main'

Fix memory leaks

Closes #2

See merge request phypid/honee!18

fix: Destroy array from PetscStrToArray

Merge branch 'jrwrigh/rearrange' into 'main'

Rearrange files into more future-oriented locations

See merge request phypid/honee!15

chore: Move navierstokes.* out of root directory

navierstokes.h to include and navierstokes.c into examples

Merge branch 'jrwrigh/fix_compiler_warnings' into 'main'

fix: Address GCC compiler warnings

See merge request phypid/honee!14

fix: Address GCC compiler warnings

- GCC was concerned that `q` in the STG code was being used
uninitialized
- GCC was also concerned that PetscViewerBinaryRead doesn't guarantee
that the value

fix: Address GCC compiler warnings

- GCC was concerned that `q` in the STG code was being used
uninitialized
- GCC was also concerned that PetscViewerBinaryRead doesn't guarantee
that the value is being set (which is always is...)

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Merge pull request #1600 from CEED/jrwrigh/refactor_bcs_essential

fluids: Introduce BCDefinition, refactor essential BCs

refactor(fluids): Rename some booleans