Merge pull request #811 from CEED/jeremy/some-caching

Store Objects For QFunction Reassembly

qf - cache more QF assembly components for CPU

Refactor Preconditioning Ingredients (#795)

* op - split preconditioning into separate file

* pc - move FDM to interface level

* pc - initial move of diagonal assembly to interface

* interf

Refactor Preconditioning Ingredients (#795)

* op - split preconditioning into separate file

* pc - move FDM to interface level

* pc - initial move of diagonal assembly to interface

* interface - only return error code or error

* doc - improve preconditioning helper function documentation

* pc - use qdata layout for interface diagonal assembly

* pc - update for consistency in naming, use of CeedChk, and static

* doc - spelling

* style - minor

* doc - add doc for CeedBuildMassLaplace

* doc - update release notes

Co-authored-by: Jed Brown <jed@jedbrown.org>

Co-authored-by: Jed Brown <jed@jedbrown.org>

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Merge pull request #750 from CEED/jeremy/identity

qf - allow identity qfunctions to have in and out EVAL_NONE

op - impl restriction only identity operators for CPU, error on code gen GPU backends

Merge pull request #735 from CEED/jeremy/style-guide

Style Unification

style - updating C variable style

Merge pull request #716 from CEED/jed/install-backend.h

Jed/install backend.h

Install install backend headers under include/ceed/

This makes it possible to distribute source plugins that provide
additional backends. It's also used in MFEM, perhaps temporarily.

Deprecate ceed

Install install backend headers under include/ceed/

This makes it possible to distribute source plugins that provide
additional backends. It's also used in MFEM, perhaps temporarily.

Deprecate ceed-backend.h, which was not previously installed, but some
users accessed it from an in-place build.

Also install CUDA and HIP headers that allow users to provide CUfunction
and hipFunction_t.

Co-authored-by: Jeremy L. Thompson <jeremy.thompson@colorado.edu>
Requested-by: Andrew T. Barker <barker29@llnl.gov>

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headers - clearify includes to not rely on transitive includes (#701)

* headers - clearify includes to not rely on transitive includes

* style - add header recommendations from 'include-what-you-

headers - clearify includes to not rely on transitive includes (#701)

* headers - clearify includes to not rely on transitive includes

* style - add header recommendations from 'include-what-you-use'

* style - apply 'include-what-you-use' changes to CUDA backends

* style - 'include-what-you-use' for hip backends

* style - drop ceed.h includes in gallery qf source

* docs - add dev notes for header files

* style - header style and alphabetize

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QFunction Context Data Object (#596)

* Ctx - create context object for QFunction context data

* Context - rename UserContext -> QFunctionContext

* Ctx - add lcov markers

* Ctx - fix leak in

QFunction Context Data Object (#596)

* Ctx - create context object for QFunction context data

* Context - rename UserContext -> QFunctionContext

* Ctx - add lcov markers

* Ctx - fix leak in identity QFunctions

* Hip/Cuda - rename sync functions for vector/context

* Tests - lcov marker update

* QFunction - drop unused function

* Python - fix copy-paste errors

* Ctx - update notes for Fortran usage

* Fortran - drop unneeded cast

Co-authored-by: Jed Brown <jed@jedbrown.org>

* Interface - use void* for SetData interfaces

* Make - use call quiet for NVCC

* Interface - use void* for GetData interfaces

* Make - add quiet call option for examples

* Makefile - create common makefile to reduce duplication/complexity in example makefiles

Co-authored-by: Jed Brown <jed@jedbrown.org>

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Composite Operator support for AssembleLinearDiag/PBDiag (#552)

* ref - add composite operator support for building diagonal/pb diagonal

* ref - add error for non-composite mult-field operator di

Composite Operator support for AssembleLinearDiag/PBDiag (#552)

* ref - add composite operator support for building diagonal/pb diagonal

* ref - add error for non-composite mult-field operator diagonal/pb diagonal assembly

* tap - add t538 exclusion because OCCA does not support galleries

* tests - adjust test cases for ceed examples for test coverage

* Op - fix documentation

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Merge branch 'master' into valeria/NSfixes

Merge pull request #513 from CEED/jeremy/restriction-no-interlace

Convert restriction to offsets

Ref/Memcheck - add restriction offsets verification

Restriction - convert restiction to use offsets instead of interlace mode. CPU and Python impl only, CUDA and MAGMA left to do.

Merge pull request #413 from CEED/jeremy/op-add

Add CeedOperatorApplyAdd

Operator - provide default impl of Composite Operators

Operator - Add OperatorApplyAdd, implement for CPU, OCCA backends

Merge pull request #409 from CEED/jeremy/ident-cpu-opt

CPU - avoid extra memcpy for identity qfunctions

CPU - avoid extra memcpy for identity qfunctions

Add Grad w/collo Interp mode to CPU backends (#290)

* Add Grad w/collo Interp mode to CPU backends

* Ref - Update dofs to nodes in basis documentation

* Ref - use memcpy for collo interp

Add kernel caching to XSMM backend

Make style and comment updates

XSMM tensor ind logic fix

Logic cleanup

Add Basis argument to TensorContractCreate

Add CeedTensorContract object (#211)