Freed orient's array

Merge pull request #1002 from CEED/jeremy/format-ceed-types

Add CeedInt_FMT

fmt - add CeedInt_FMT

Merge pull request #858 from CEED/jeremy/dump-copy-stuff

Strip redundant/outdated license info duplication

minor - update copyright headers

Merge pull request #913 from CEED/jeremy/coo-ptrdiff

Create CeedSize as ptrdiff_t

rstr - use CeedSize for l_size

Merge pull request #889 from CEED/rezgar/oriented-restr

Element Restriction Oriented

updated ceed-ref-restriction.c

Added CeedElemRestrictionIsOriented function

backends/ref: Added oriented element restriction.

vec/qf - initial valid/borrowed/owned split for data (#853)

* vec/qf - initial valid/borrowed/owned split for data

* vec/qf - tidy logic for checking active/stale data

* minor - add missing NU

vec/qf - initial valid/borrowed/owned split for data (#853)

* vec/qf - initial valid/borrowed/owned split for data

* vec/qf - tidy logic for checking active/stale data

* minor - add missing NULL

* doc - explain VectorTakeArray update

* minor - update error messages

* test - update error message in junit/tap

* gpu - fix stray CeedScalar vs void for QFunctionContext

* vec/qf - clarify/simplify access logic

* vec - calloc host arrays when no value set to make empty

* style - minor

* style - minor

* minor - fix error messages

* vec/qf - move data validity checking to backend interface

* gpu - add missing sync error checking for qfcontext

* gpu - homogonize use of impl for backend data to reduce confusion

* vec - clarify access conditions

* python - update test for stricter vector access

* vec - minor fixes

* minor - fix ipython change

* vec - add missing declarations in ceed/backend.h

* ctx - mirror vector borrowed data check in ctx interface

* vec - add CeedVectorGetArrayWrite

* vec - consistent use of CeedVectorGetArray vs CeedVectorGetArrayWrite

* python - small vec fixes

* doc - describe vector data semantics

* magma - update restriction

* gpu - fix restr bug I added, need to sum into target

* magma - fix restriction bug

* cpu - fix restriction bug here too

* op - fix evec allocations

* julia - fix ElemRestriction for new vector access rules

* op - double check GetArray vs Read vs Write usage

* doc - small fix

* restr - clean up read/write logic for restr

* python - add vec.array_write

* magma - typo fix

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Merge pull request #735 from CEED/jeremy/style-guide

Style Unification

style - updating C variable style

Merge pull request #716 from CEED/jed/install-backend.h

Jed/install backend.h

Install install backend headers under include/ceed/

This makes it possible to distribute source plugins that provide
additional backends. It's also used in MFEM, perhaps temporarily.

Deprecate ceed

Install install backend headers under include/ceed/

This makes it possible to distribute source plugins that provide
additional backends. It's also used in MFEM, perhaps temporarily.

Deprecate ceed-backend.h, which was not previously installed, but some
users accessed it from an in-place build.

Also install CUDA and HIP headers that allow users to provide CUfunction
and hipFunction_t.

Co-authored-by: Jeremy L. Thompson <jeremy.thompson@colorado.edu>
Requested-by: Andrew T. Barker <barker29@llnl.gov>

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Error Handling Improvement [fix #696] (#691)

* Operator - add operator/qfunction field compatibility checks

* QFunction - do not allow adding fields to QFunction in use with an operator

* Exam

Error Handling Improvement [fix #696] (#691)

* Operator - add operator/qfunction field compatibility checks

* QFunction - do not allow adding fields to QFunction in use with an operator

* Examples - add some extra exclusion markers in ceed example

* error - add error enum

* error - update error enum names and numbering

* error - use CEED_ERROR_BACKEND in all backend errors

* error - begin classifying interface errors

* error - update backends to use CEED_ERROR_SUCCESS and CeedChkBackend

* error - use new errors in gallery

* error - add some unsaved modifications

* error - improve documentation

* error - define CEED_ERROR_SUCCESS in GPU JiT; we really should have a common header to pipe defines to the JiT code

* error - more error code editing

* error - fix error string

* operator - fix setting field qpts

* basis - add input/output dimension error checking

* python - move basis utility methods to ceed object, no basis required or used

* python - force exit with negative error code

* make style-py

* rust - initial work to add error handling logic

* rust - add ceed.resource method

* rust - add results for methods that may fail

* rust - also format doctests

* minor - drop unused CeedChk()

* error - rename terminal/nonterminal to major/minor

* rust - set ErrorStore as default errorhandler

* python - revert error handing change for python

* python - use success error code from C bindings

* error - only upgrade error code in backend if positive

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headers - clearify includes to not rely on transitive includes (#701)

* headers - clearify includes to not rely on transitive includes

* style - add header recommendations from 'include-what-you-

headers - clearify includes to not rely on transitive includes (#701)

* headers - clearify includes to not rely on transitive includes

* style - add header recommendations from 'include-what-you-use'

* style - apply 'include-what-you-use' changes to CUDA backends

* style - 'include-what-you-use' for hip backends

* style - drop ceed.h includes in gallery qf source

* docs - add dev notes for header files

* style - header style and alphabetize

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QFunction Context Data Object (#596)

* Ctx - create context object for QFunction context data

* Context - rename UserContext -> QFunctionContext

* Ctx - add lcov markers

* Ctx - fix leak in

QFunction Context Data Object (#596)

* Ctx - create context object for QFunction context data

* Context - rename UserContext -> QFunctionContext

* Ctx - add lcov markers

* Ctx - fix leak in identity QFunctions

* Hip/Cuda - rename sync functions for vector/context

* Tests - lcov marker update

* QFunction - drop unused function

* Python - fix copy-paste errors

* Ctx - update notes for Fortran usage

* Fortran - drop unneeded cast

Co-authored-by: Jed Brown <jed@jedbrown.org>

* Interface - use void* for SetData interfaces

* Make - use call quiet for NVCC

* Interface - use void* for GetData interfaces

* Make - add quiet call option for examples

* Makefile - create common makefile to reduce duplication/complexity in example makefiles

Co-authored-by: Jed Brown <jed@jedbrown.org>

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Merge pull request #558 from CEED/jeremy/func-rename

Rename Functions

style - change Get*Status to Is*

Convert CUDA ref/reg/shared E-Layout (#554)

* tests - update tests for multiple e-layouts

* CUDA - convert ref and reg restrictions to Q-layout

* CUDA - ref/reg/shared use gen/magma E-Layout f

Convert CUDA ref/reg/shared E-Layout (#554)

* tests - update tests for multiple e-layouts

* CUDA - convert ref and reg restrictions to Q-layout

* CUDA - ref/reg/shared use gen/magma E-Layout for multi elememnt basis apply and operator apply

* CUDA/MAGMA - drop eandqdiffer and separate MAGMA operator code

* CUDA - update operator comment

* reg - clarify read/write dofs/quads

* CUDA - drop dead code

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Merge branch 'master' into valeria/NSfixes

Merge pull request #529 from CEED/jeremy/empty-restr

Empty Restriction Support

CPU - support empty restrictions