Merge pull request #735 from CEED/jeremy/style-guide

Style Unification

style - updating C variable style

Merge pull request #716 from CEED/jed/install-backend.h

Jed/install backend.h

Install install backend headers under include/ceed/

This makes it possible to distribute source plugins that provide
additional backends. It's also used in MFEM, perhaps temporarily.

Deprecate ceed

Install install backend headers under include/ceed/

This makes it possible to distribute source plugins that provide
additional backends. It's also used in MFEM, perhaps temporarily.

Deprecate ceed-backend.h, which was not previously installed, but some
users accessed it from an in-place build.

Also install CUDA and HIP headers that allow users to provide CUfunction
and hipFunction_t.

Co-authored-by: Jeremy L. Thompson <jeremy.thompson@colorado.edu>
Requested-by: Andrew T. Barker <barker29@llnl.gov>

show more ...

Full assembly of CeedOperator (#712)

* Add CeedOperatorLinearFullAssemble() to explicitly assemble a CeedOperator

The output format is a stream of (row, column, value) triples, which client
code

Full assembly of CeedOperator (#712)

* Add CeedOperatorLinearFullAssemble() to explicitly assemble a CeedOperator

The output format is a stream of (row, column, value) triples, which client
code can use to assemble a sparse matrix by adding the values in the
appropriate places.

* Add full assembly test for triangular mesh, t563-operator.c, which is analogous to t536-operator.c

* assembly: change interface to separate nonzero structure from values

* assembly: add potential backends for CeedOperatorLinearAssemble, CeedOperatorLinearAssemblySymbolic

* assembly: use CeedMatrixMultiply() instead of hand-rolled duplicated code

This also involves switching some arrays from column-major ordering to
row-major ordering.

* Remove CeedMatrixMultiply from ceed-impl.h because it is already in ceed-backend.h

* assembly: modify use of fallback resource

* operator - use new error codes in full assembly

* style - minor

* operator - switch default fallback to none

* operator - fix fallback for full assembly

* operator - fix fallback usage

* operator - fix fallback for digonal assembly

* avx - revert bug

* avx - revert bug

Co-authored-by: jeremylt <thompson.jeremy.luke@gmail.com>

show more ...

Error Handling Improvement [fix #696] (#691)

* Operator - add operator/qfunction field compatibility checks

* QFunction - do not allow adding fields to QFunction in use with an operator

* Exam

Error Handling Improvement [fix #696] (#691)

* Operator - add operator/qfunction field compatibility checks

* QFunction - do not allow adding fields to QFunction in use with an operator

* Examples - add some extra exclusion markers in ceed example

* error - add error enum

* error - update error enum names and numbering

* error - use CEED_ERROR_BACKEND in all backend errors

* error - begin classifying interface errors

* error - update backends to use CEED_ERROR_SUCCESS and CeedChkBackend

* error - use new errors in gallery

* error - add some unsaved modifications

* error - improve documentation

* error - define CEED_ERROR_SUCCESS in GPU JiT; we really should have a common header to pipe defines to the JiT code

* error - more error code editing

* error - fix error string

* operator - fix setting field qpts

* basis - add input/output dimension error checking

* python - move basis utility methods to ceed object, no basis required or used

* python - force exit with negative error code

* make style-py

* rust - initial work to add error handling logic

* rust - add ceed.resource method

* rust - add results for methods that may fail

* rust - also format doctests

* minor - drop unused CeedChk()

* error - rename terminal/nonterminal to major/minor

* rust - set ErrorStore as default errorhandler

* python - revert error handing change for python

* python - use success error code from C bindings

* error - only upgrade error code in backend if positive

show more ...

Merge branch 'will/julia' into main [PR #632]

make.jl: set devbranch="main"

* origin/will/julia:
Add short FFI section to docs
Julia: codecov CI
Julia: Travis CI
Julia: automatic code forma

Merge branch 'will/julia' into main [PR #632]

make.jl: set devbranch="main"

* origin/will/julia:
Add short FFI section to docs
Julia: codecov CI
Julia: Travis CI
Julia: automatic code formatting
Julia: documentation
Julia: examples
Julia: unit tests
Julia: LibCEED.jl Julia interface
Make fallback Ceed use Error callback of parent
Use pointer to va_list in error handler
Bugfix in `CeedOperatorLinearAssembleAddDiagonal`
Bugfix in `CeedQFunctionCreateInteriorByName`
Update t504 and t523 output with correct field names
Bugfix in `CeedOperatorSingleView`

show more ...

Use pointer to va_list in error handler

va_list is implementation defined, so a pointer works better with FFI.

resolve merge conflicts for v0.7 release

Merge pull request #610 from CEED/jeremy/cuda-qf-pointer

QF - add interface to set device user function

QF - add interface to set device user function

QFunction Context Data Object (#596)

* Ctx - create context object for QFunction context data

* Context - rename UserContext -> QFunctionContext

* Ctx - add lcov markers

* Ctx - fix leak in

QFunction Context Data Object (#596)

* Ctx - create context object for QFunction context data

* Context - rename UserContext -> QFunctionContext

* Ctx - add lcov markers

* Ctx - fix leak in identity QFunctions

* Hip/Cuda - rename sync functions for vector/context

* Tests - lcov marker update

* QFunction - drop unused function

* Python - fix copy-paste errors

* Ctx - update notes for Fortran usage

* Fortran - drop unneeded cast

Co-authored-by: Jed Brown <jed@jedbrown.org>

* Interface - use void* for SetData interfaces

* Make - use call quiet for NVCC

* Interface - use void* for GetData interfaces

* Make - add quiet call option for examples

* Makefile - create common makefile to reduce duplication/complexity in example makefiles

Co-authored-by: Jed Brown <jed@jedbrown.org>

show more ...

Op - add interface for multigrid level creation (#579)

* Op - add interface for multigrid level creation

* Op - add implementation for OperatorMultigridLevelCreate

* make style

* make tidy

Op - add interface for multigrid level creation (#579)

* Op - add interface for multigrid level creation

* Op - add implementation for OperatorMultigridLevelCreate

* make style

* make tidy

* Op - add test t550, fix errors

* Tests - add Fortran version of t550

* Tests - add t511 for testing tensor basis multigrid level setup

* make style and tidy

* Tests - fix t55* memory leaks

* Tests - add t552 for non-tensor basis multigrid levels

* CUDA - use CeedIntMax in shared CUDA backend

* Tests - add OCCA test exception for t55*

* Op - add lvector global prolongation multiplicity, simplifies user interface

* Solids - convert example to new interface

* make style

* Tests - convert t550 to multicomponent

* Solids - drop unused ceed_fine

* Python - add new multigrid level interface

* Python - fix operator wrap, use ceed python obj rather than ceed pointer

* Gallery - update comment slightly

* Tests - remove accidental duplicate test

* Multigrid - add size=2 case as well

* Operator - drop unneeded inline

* QFunction - simplify context ownership to match vector

* make style

* Python - update multigrid function signature

* Operator - refactor prolong/restrict qfunctions as scaling qfunctions

* Vector - add testing for reciprocal and add to Fortran/Python interfaces

* CUDA - add VectorReciprocal on device

* Gallery - drop specalized versions for 'Scale', wil fix performance hit later

* Hip - add vector reciprocal

* Operator - add more flexible prologation basis creation interface

* Vec - make sure data is set for VectorReciprocal

* Tests - drop ncomp for t550/1 so kernel is not too large for Magma backend

* Tests - add missing lcov markers

* make style

* Travis - allow ARM job to fail

* Travis - fix intel install

* Travis - try different install dir name for inteloneapi

* Travis - add ifort, ipp packages

* Tests - add missing lcov marker

show more ...

Merge branch 'main' into natalie/hip-ref-v2

Ceed - add message storing error handler (#587)

* Ceed - add message storing error handler

* Python - use CeedErrorStore and CeedGetErrorMessage to pass messages from C to Python

* make style

Ceed - add message storing error handler (#587)

* Ceed - add message storing error handler

* Python - use CeedErrorStore and CeedGetErrorMessage to pass messages from C to Python

* make style

* make tidy

* Python - add comment about cffi and vargs

* Ceed - add 'store' as possible env option for CEED_ERROR_HANDLER

* Python - and error handling for creation of ceed context

* Ceed - statically allocate error message array

* Ceed - simplify error message copying and guard against buffer overflow

* Tests - fix small t005 python bug

* Tests - fix small leak in t005

* Ceed - small fix in setting error handler from env

* Tests - add missing lcov markers

show more ...

Merge branch 'main' into natalie/hip-ref-v2

Merge pull request #577 from CEED/jeremy/take-array

Vec - add CeedVectorTakeArray

Vec - add CeedVectorTakeArray

Merge branch 'master' into yohann/nameKernels

Merge pull request #570 from CEED/jeremy/debug-mode

Add Debug Mode

Ceed - add debugging mode for backends, lifted to library level from OCCA backend

Merge pull request #561 from CEED/jeremy/is-deterministic

Ceed - add IsDeterministic

Ceed - add IsDeterministic

Merge pull request #560 from CEED/jeremy/diag-vec

LinearAssemble Improvements

Op - add AssembleAdd version of diagonal assembly functions, will be helpful for MFEM integration