Merge branch 'main' into natalie/hip-ref-v2

Merge pull request #588 from CEED/jeremy/solid-small-fix

Solids - small fixes for CUDA compilation

Doc - document QFunction source requirements for single source

Merge branch 'main' into natalie/hip-ref-v2

Merge branch 'master' into yohann/nameKernels

Merge pull request #566 from CEED/jeremy/solid-cuda

Solids - enable use of GPU vectors

Gallery - always set size of identity qf in context, NULL doesn't always work on GPU

QFunction - fix initalization of identity qfunctions

Merge pull request #558 from CEED/jeremy/func-rename

Rename Functions

style - change Get*Status to Is*

Merge branch 'master' into valeria/NSfixes

Merge pull request #523 from CEED/jed/breathe-4.17

Jed/breathe 4.17

doc: add @ref for enum mentions

Merge pull request #446 from CEED/user-manual

Sphinx user manual published at libceed.readthedocs.io

doc: convert to Sphinx documentation at libceed.readthedocs.io

Some technical notes about the expanded docs/process:

* Doxygen is now restricted to API documentation. Sphinx docs are
incomplete

doc: convert to Sphinx documentation at libceed.readthedocs.io

Some technical notes about the expanded docs/process:

* Doxygen is now restricted to API documentation. Sphinx docs are
incomplete surrogates due to not hyperlinking code listings, though
we hope the Doxygen site can be removed eventually.

* PDF output uses XeTeX (unicode and OTF fonts) with TeX Gyre Pagella
and DejaVu Sans Mono. You may need to install these fonts in order
to build the PDF users manual.

* Obtaining the author list from Git has not worked on
ReadTheDocs (`git shortlog` is empty even though `git log` is not),
so we automatically generate it on developer machines with `make
doc`. If the author information is incorrect/mangled, edit .mailmap
to fix the mapping.

* Math semantics are based on the description here
https://github.com/sphinx-doc/sphinx/issues/3785

Sphinx chooses one of two setups for the maths.

* If there is a single equation, then we wrap the maths in
\begin{equation*} (or equation).

* If there are multiple equations (as determined by the presence of
an empty line), then we wrap the maths first in \begin{aligned}
and then in \begin{align*} (or align).

Co-authored-by: Jeremy L. Thompson <jeremy.thompson@colorado.edu>
Co-authored-by: Jed Brown <jed@jedbrown.org>

show more ...

doc: separate Doxygen groups by Public API/Backend API/Internal Functions

Helped-by: Valeria Barra <valeriabarra21@gmail.com>
Squashed-by: Jed Brown <jed@jedbrown.org>

Merge pull request #456 from CEED/jeremy/strided-restriction

Strided Restrictions

Interface - update constants to be const...ant

Merge branch 'jed/ns-dmplex' [PR #458]

* jed/ns-dmplex: (73 commits)
NS: remove density_current_primitive (still work in progress)
Remove a bunch of unused variables and update doc
Update READ

Merge branch 'jed/ns-dmplex' [PR #458]

* jed/ns-dmplex: (73 commits)
NS: remove density_current_primitive (still work in progress)
Remove a bunch of unused variables and update doc
Update README: remove density_current_primitive problem option for now
Use const in VLA declaration casts to suppress icc warning also in densitycurrent_primitive
Remove a bunch of unused or double-declared variables
Update README
NS: use const in VLA casts to suppress icc warning
NS: add command-line support for specifying DC center/axis
NS: return to insulated no-slip walls instead of full-Dirichlet
NS: remove dead code for scaling VTK output back to dimensional units
NS: add support for free slip wall boundary conditions
NS density_current: remove redundant initial/boundary condition and trailing whitespace
Some changes in documentation
Update top-level README
Update examples/README
Update examples/navier-stokes/README
Update .gitignore
Update documentation
Initialize *problem pointer as NULL
NS: move nsplex.c to navierstokes.c
...

show more ...

Merge pull request #428 from CEED/valeria/small-doc-fixes

Small doc fixes

Small doc improvements to make it more readable and consistent

CeedQFunctionCreateInterior: error handling when f or source is NULL

Merge pull request #423 from CEED/jeremy/small-fixes

Small fixes from Python Work

Doc - more small fixes

Doc - small updates for correctness