Merge pull request #733 from CEED/jeremy/more-registration

Extra error message for uncompiled backends

typo - fix spelling

Merge pull request #730 from CEED/jeremy/match-error

interface - improved resource matching check

interface - add help option for CeedInit and function to access arrays of resources + priorities

interface - improved resource matching check

Fluids - More Regression Tests (#687)

* examples/fluids: Regression tests: Changed the reference files' names and
the flags to associate with the corresponding example (so far
density_current only

Fluids - More Regression Tests (#687)

* examples/fluids: Regression tests: Changed the reference files' names and
the flags to associate with the corresponding example (so far
density_current only)

Changed the files' names

Changed the flags

* examples/fluids: added new regression tests for advection(2d)

* examples/fluids: regression tests: removed the enums and passed defined command-line options for filepath and test tolerance.
Removed solver controls and assigned testtol=1E-11 for explicit cases.

style

examples/fluids: regression tests: fixed the pathfile issue (it needs to be relative)

examples/fluids: Specified a name for each test

examples/fluids: TESTARGS - trying absolute path for the test files

* tests/tap.sh: Print out test names for fluids examples

inspired-by: @jeremylt

tests/tap.sh: drop quotation marks from the printed test names

* tests: specify test name for ceed and nek examples and print the names when there are multiple test arguments

* examples/fluids: remove test_ from test names

* style

* tests/junit.py: Add name for tests with multiple test cases

* examples/ceed/ex1-volume.c: make the naming of the tests consistent

* tests/junit.py: a more compact if statement

helped-by: @jeremylt

* examples/fluids: drop the broken supg test of density_current for now

The stabilization enum is not passed to density_current QFunction hence
the test doesn't work. We need to create a new test when the code is
debugged.

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Rust - add examples (#683)

* Rust - initial version of ex1

Example - move closure

Co-authored-by: Jed Brown <jed@jedbrown.org>

typo fix

Co-authored-by: Jed Brown <jed@jedbrown.org>

mi

Rust - add examples (#683)

* Rust - initial version of ex1

Example - move closure

Co-authored-by: Jed Brown <jed@jedbrown.org>

typo fix

Co-authored-by: Jed Brown <jed@jedbrown.org>

minor tidying

order -> degree

drop operator applicaiton messages

* rust: make top-level workspace and use libceed from path

This allows a single "cargo test" from the top level.

* rust: add version-sync (to help us remember when we publish a crate)

* examples - consistency update

* Rust - add Cargo.lock to top level gitignore

* rust - refactor example to add tests

* Rust - test and style from workspace

* Rust - update year in header

* Rust - add error values to Error, switch to String

* Rust - add input validation in check

* Rust - format volume output in example

* Rust - update example help output

* Rust - example tests rename to simplify

* Rust - split example 1 into 3 parts

* rust: std::sync::Once for CeedRegisterAll()

* Promote CeedRegisterAll() and CeedQFunctionRegisterAll() to User
* Guard calls to CeedInit() to avoid races in parallel testing

* Examples - update rust example to new builder syntax

* Examples - add rust ex2

* Rust - add CEED_STRIDES_BACKEND

* Examples - drop unused restriction in ceed ex2

* Rust - minor documentation update

* Rust - adopt convention of 'dimension-like' values all using usize; reduces casting

* Actions - add Rust code coverage

* Rust - fix usize conversion

* Rust - update casting between i32(C interface) and usize(Rust interface)

* Actions - include Rust doctests

* Actions - Rust doctest coverange only avaliable in nightly

* Rust - drop explict typing of values passed to C get* functions

* Rust - modify version numbers tests, cargo-tarpaulin and cargo have different calling paths in tests

* cargo fmt

* Examples - add separate Rust example quiet mode

* Actions - rustfmt not always avaliable on nightly

* Rust - simplify version tests

* Actions - add a few notes

* CodeCov - try adding gallery to 'fixes'

* CodeCov - drop some codecov noise in examples

* Examples - test all combinations in ex1/ex2

* Rust - test 3d examples without quiet flag

* Actions - use gcc-10 for compatibility in gcov reports

* Examples - test gallery in 1/2/3d in Rust ex

* Gitlab - also report gcov version

* JUnit - adjust indentation

* Gitlab - make it easier to find complier info in logs

* Tests - fix minor styling strangeness in t002

* Actions - only upload rust coverage

* Actions - exclude non-rust files from rust coverage

* Cov - exclude weak symbols code, not useful cov info

* Examples - clean up options creation for tests in Rust examples

* Examples - simplify tolerance for testing Rust examples

* cargo fmt

* Examples - another match

* Examples - common Rust example code in shared local crate

Co-authored-by: Jed Brown <jed@jedbrown.org>

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Merge pull request #679 from CEED/jed/petsc-hip

examples/petsc: use VecGetArrayAndMemType() to support CUDA/HIP/Kokkos

tests: enable junit testing of petsc-multigrid with OCCA

OCCA used to skip this test, but it was enabled in tap.sh as part of
issue #305 and I'm enabling here for junit (tested on noether and azure)

tests: enable junit testing of petsc-multigrid with OCCA

OCCA used to skip this test, but it was enabled in tap.sh as part of
issue #305 and I'm enabling here for junit (tested on noether and azure).

Reported-by: Jeremy L. Thompson <jeremy.thompson@colorado.edu>

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tests/junit.py: fix start time variable misuse

Merge pull request #658 from CEED/jeremy/actions

CI - Use GitHub Actions

junit - fix args parsing for Nek

tests - exclude Nek+OCCA tests

Merge pull request #633 from CEED/icl/hip-magma

enable HIP mode for MAGMA backend

CI - add hipMAGMA to CI (#641)

* CI - add hipMAGMA to CI

* Magma - add clearer error message for unsupported basis ranges

* make style

resolve merge conflicts for v0.7 release

Jeremy/py debugging (#637)

* Ceed - only store error with parent

* Python - assert state is not in write status

* Vector - add reader check to destructor

* make style

* remove debugging

Jeremy/py debugging (#637)

* Ceed - only store error with parent

* Python - assert state is not in write status

* Vector - add reader check to destructor

* make style

* remove debugging assertion

* Python - minor documentation correctness

* Python - hold reference to data array for USE_POINTER to prevent gc

* Python - hold reference to data array for USE_POINTER to prevent gc for restriction and context

* Python - use None object for initial ref back to ceed objects

* Python - add USE_POINTER to imports as needed

* Junit - update valid error message for writable access lock

* Python - change exception raised test to help gc

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Merge branch 'main' into yohann/fix-cuda-gen

OCCA Backend Update (#305)

* [Docs] Update docs for new OCCA backend

* [Fortran] CeedVectorRestoreArray fix

* [Test] Updates t002-ceed test to support query params

* [Make] Adds tidy for cp

OCCA Backend Update (#305)

* [Docs] Update docs for new OCCA backend

* [Fortran] CeedVectorRestoreArray fix

* [Test] Updates t002-ceed test to support query params

* [Make] Adds tidy for cpp files

* [OCCA] Updates OCCA backend

* PR feedback: Update StrideType naming

* PR feedback: Fixed USER_STRIDES vs BACKEND_STRIDES usage

* [OCCA] Add comments to code generation

* [CI] Removes commit from OCCA build

* PR Feedback: Update README

* PR Feedback: Removed compiler warnings

* Fix restriction function changes

* occa: track AssembleLinear -> LinearAssemble

* [OCCA][Vector] Adds takeArray method

* [OCCA][Restriction] Fixes restriction strides

* [OCCA][Operator] Adds point block diagonal registration

* [OCCA][Operator] Fixes

* OCCA - update debug color for visability

* Travis - fix extra fi

* OCCA - adjust kernel, multi component derivatives are expected as [dim][comp][q]

* OCCA - adjust basis kernel args in operator kernel to agree with expected [dim][comp][q] ordeing

* OCCA - fix uninitalized memory in grad transpose 3d kernel

* OCCA - fix Elayout description

* OCCA - fix bad dimensions in basis kernel

* OCCA - fix TakeArray to sync before returning array pointer

* MFEM - print error when test fails

* OCCA - fix 2d grad kernels

* OCCA - flag digonal of composite operators unsupported

* OCCA - fix restoreArray logic

* OCCA - minor cleanup with GPU

* Travis - add 'make info' where able for debugging

* OCCA - explictily test OpenCL mode

* OCCA - drop restrict for ElemRestriction kernels, OpenCL doesn't like it

* OCCA - explicitly test cuda and hip versions of OCCA backend

* OCCA - explicitly test OpenMP mode in OCCA

* Tests - modify check for VLA support for OCCA to catch all OCCA modes

* WIP - test possible OCCA fix for PowerPC

* OCCA - separate CPU modes for testing as well

* Readme - update list of OCCA backend modes

* Makefile - fix unterminated addprefix

* OCCA - enable direct access to OCCA Serial mode

* OCCA - add comments to registration

* Makefile - remove extra )

* OCCA - remove pass by reference C++ syntax for OpenCL compatability

* OCCA - drop use of @restrict for OpenCL

* OCCA - remove OpenCL mode, not fully supported in OCCA (see OCCA issue #166)

* OCCA - fixing rebase issues

* OCCA - Fix implementation of QFunctionContext

* OCCA - move GetContextSize so ierr check actually works

* Travis - use libOCCA instead of jeremylt/occa

* Junit - update OCCA test skip list

* Make - simplify OCCA check for enabled modes

Co-authored-by: Jed Brown <jed@jedbrown.org>
Co-authored-by: Jeremy L. Thompson <jeremy.thompson@colorado.edu>

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Merge pull request #235 from CEED/jed/gitlab-ci

Add testing (with HIP) via GitLab-CI

make junit: return failure when tests fail

Merge branch 'master' into valeria/NSfixes

Merge pull request #520 from CEED/jeremy/restriction-host-offsets

CeedElemRestrictionGetOffsets

ElemRestriction - add state counter for reading offsets array

Merge branch 'master' into valeria/jupyter-notebook-tutorials